The Deployment of Visual Attention

DTIC Science & Technology

2009-06-15

Wang, Irwin, & McCarley, 2001; Shore & Klein, 2000? von Muhlenen, Muller, & Muller, 2003). Though we continued to find no reliable evidence for marking...tasks interfered with each other ( Sperling & Melchner, 1978). Measured in this manner, we found that the two tasks did not interfere any more than...14(1),59-75. Page 20 ...:-;W~o=lf=le~,J=M~.· AFOSR Final Report 2009 Sperling , G., & Melchner, M. J. (1978). The attention operating characteristic

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns such as Thomas Muller, left, and Austin Langdon are joining agency scientists, contributing in the area of Exploration Research and Technology. Muller is pursuing a degree in computer engineering and control systems and Florida Tech. Langdon is an electrical engineering major at the University of Kentucky. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

The Media and National Security Decision-Making

DTIC Science & Technology

2004-02-29

2002. Muller, Kerstin, “The CNN effect, media and global governance,” Speech by Minister of State Kerstin Muller to Open the Forum Global Issues on...time to analyze, develop and arrive at a decision is acutely abbreviated. Many factors influence this, and the increasing public awareness on global ... issues , thanks to the abundance of information, makes this a complex task. The attention and support Americans give to an issue is in direct

Physics 101: What Our Next President Needs to Know (LBNL Science at the Theater)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Muller, Rich

2008-10-13

Rich Muller, author of Physics for Future Presidents, argues that the next president can't afford to be ignorant about the science behind terrorism, nuclear dangers, energy, space, and global warming. Muller, a MacArthur Fellow, Berkeley Lab physicist, and one of the most popular lecturers at UC Berkeley, discusses what it takes to survive in today's increasingly dangerous world -- information essential to the next commander-in-chief. He presented his talk Oct. 13, 2008.

Physics 101: What Our Next President Needs to Know (LBNL Science at the Theater)

ScienceCinema

Muller, Rich

2018-06-12

Rich Muller, author of Physics for Future Presidents, argues that the next president can't afford to be ignorant about the science behind terrorism, nuclear dangers, energy, space, and global warming. Muller, a MacArthur Fellow, Berkeley Lab physicist, and one of the most popular lecturers at UC Berkeley, discusses what it takes to survive in today's increasingly dangerous world -- information essential to the next commander-in-chief. He presented his talk Oct. 13, 2008.

Final Reports for Contract N00014-87-K-0181 (University of Hawaii, School of Ocean and Earth Science and Technology)

DTIC Science & Technology

1994-09-01

CONTENT A. Administration B. Dynamics of Small-scale Ocean Motions (P. Muller) C. Seismic Anisotropy ( G . Fryer) D. Low Frequency Modulus Measurements...Manghnani G . Marching the Elastodynamic Wave Equation (N. Frazer) H. Theoretical & Computational Studies in Marine Seismology (N. Frazer) I. Correction and...Publication. and in the summary article: Muller, P.,E. D’Asaro and G . Holloway, 1991: Internal Gravity Waves and Mixing. EOS, T:ansactions, American

Balloon Borne Instrumentation for Detection of Gamma Ray Glows

NASA Astrophysics Data System (ADS)

Sterpka, C. F.; Bagheri, M.; Dwyer, J. R.; Liu, N.; Morman, K.; Gadbois, J. L.; Bozarth, A.; Boggs, L.; Mailyan, B. G.; Nag, A.; Lazarus, S. M.; Austin, M.; Aguirre, F.; Colvin, J.; Haley, V.; Rassoul, H.

2017-12-01

Gamma-ray glows are emissions of gamma rays that last from seconds to minutes and are produced by runaway electrons in high-field regions of thunderclouds. The lightning group at the University of New Hampshire in collaboration with the Florida Institute of Technology has designed balloon-based instrumentation for flying into thunderstorms with the aim of detecting such radiation. The instrumentation includes two Geiger-Muller tubes, sensitive to both gamma rays and charged particles, and a low-power lightweight electric field mill, designed and calibrated to measure both polarity and amplitude of the vertical electric field inside the thunderstorm region. With the polarity measurement provided by the field mill, the Geiger-Muller tubes should be capable of differentiating energetic electrons from positrons. Additionally, a lead sheet is placed between the Geiger-Muller tubes to differentiate between charged particles and gamma rays. We have conducted several test flights of this system during the summer of 2017. In this study, we will present an overview of the instrumentation and discuss preliminary results from the test flights.

"ON ALGEBRAIC DECODING OF Q-ARY REED-MULLER AND PRODUCT REED-SOLOMON CODES"

DOE Office of Scientific and Technical Information (OSTI.GOV)

SANTHI, NANDAKISHORE

We consider a list decoding algorithm recently proposed by Pellikaan-Wu for q-ary Reed-Muller codes RM{sub q}({ell}, m, n) of length n {le} q{sup m} when {ell} {le} q. A simple and easily accessible correctness proof is given which shows that this algorithm achieves a relative error-correction radius of {tau} {le} (1-{radical}{ell}q{sup m-1}/n). This is an improvement over the proof using one-point Algebraic-Geometric decoding method given in. The described algorithm can be adapted to decode product Reed-Solomon codes. We then propose a new low complexity recursive aJgebraic decoding algorithm for product Reed-Solomon codes and Reed-Muller codes. This algorithm achieves a relativemore » error correction radius of {tau} {le} {Pi}{sub i=1}{sup m} (1 - {radical}k{sub i}/q). This algorithm is then proved to outperform the Pellikaan-Wu algorithm in both complexity and error correction radius over a wide range of code rates.« less

Training the Future - Swamp Work Activities

NASA Image and Video Library

2017-07-19

In the Swamp Works laboratory at NASA's Kennedy Space Center in Florida, student interns, from the left, Jeremiah House, Thomas Muller and Austin Langdon are joining agency scientists, contributing in the area of Exploration Research and Technology. House is studying computer/electrical engineering at John Brown University in Siloam Springs, Arkansas. Muller is pursuing a degree in computer engineering and control systems and Florida Tech. Langdon is an electrical engineering major at the University of Kentucky. The agency attracts its future workforce through the NASA Internship, Fellowships and Scholarships, or NIFS, Program.

Fault-tolerant conversion between adjacent Reed-Muller quantum codes based on gauge fixing

NASA Astrophysics Data System (ADS)

Quan, Dong-Xiao; Zhu, Li-Li; Pei, Chang-Xing; Sanders, Barry C.

2018-03-01

We design forward and backward fault-tolerant conversion circuits, which convert between the Steane code and the 15-qubit Reed-Muller quantum code so as to provide a universal transversal gate set. In our method, only seven out of a total 14 code stabilizers need to be measured, and we further enhance the circuit by simplifying some stabilizers; thus, we need only to measure eight weight-4 stabilizers for one round of forward conversion and seven weight-4 stabilizers for one round of backward conversion. For conversion, we treat random single-qubit errors and their influence on syndromes of gauge operators, and our novel single-step process enables more efficient fault-tolerant conversion between these two codes. We make our method quite general by showing how to convert between any two adjacent Reed-Muller quantum codes \\overline{\\textsf{RM}}(1,m) and \\overline{\\textsf{RM}}≤ft(1,m+1\\right) , for which we need only measure stabilizers whose number scales linearly with m rather than exponentially with m obtained in previous work. We provide the explicit mathematical expression for the necessary stabilizers and the concomitant resources required.

Perceptual similarity and the neural correlates of geometrical illusions in human brain structure.

PubMed

Axelrod, Vadim; Schwarzkopf, D Samuel; Gilaie-Dotan, Sharon; Rees, Geraint

2017-01-09

Geometrical visual illusions are an intriguing phenomenon, in which subjective perception consistently misjudges the objective, physical properties of the visual stimulus. Prominent theoretical proposals have been advanced attempting to find common mechanisms across illusions. But empirically testing the similarity between illusions has been notoriously difficult because illusions have very different visual appearances. Here we overcome this difficulty by capitalizing on the variability of the illusory magnitude across participants. Fifty-nine healthy volunteers participated in the study that included measurement of individual illusion magnitude and structural MRI scanning. We tested the Muller-Lyer, Ebbinghaus, Ponzo, and vertical-horizontal geometrical illusions as well as a non-geometrical, contrast illusion. We found some degree of similarity in behavioral judgments of all tested geometrical illusions, but not between geometrical illusions and non-geometrical, contrast illusion. The highest similarity was found between Ebbinghaus and Muller-Lyer geometrical illusions. Furthermore, the magnitude of all geometrical illusions, and particularly the Ebbinghaus and Muller-Lyer illusions, correlated with local gray matter density in the parahippocampal cortex, but not in other brain areas. Our findings suggest that visuospatial integration and scene construction processes might partly mediate individual differences in geometric illusory perception. Overall, these findings contribute to a better understanding of the mechanisms behind geometrical illusions.

Differential occurrence of chromosome inversion polymorphisms among Muller's elements in three species of the tripunctata group of Drosophila, including a species with fast chromosomal evolution.

PubMed

Brianti, Mitsue T; Ananina, Galina; Klaczko, Louis B

2013-01-01

Detailed chromosome maps with reliable homologies among chromosomes of different species are the first step to study the evolution of the genetic architecture in any set of species. Here, we present detailed photo maps of the polytene chromosomes of three closely related species of the tripunctata group (subgenus Drosophila): Drosophila mediopunctata, D. roehrae, and D. unipunctata. We identified Muller's elements in each species, using FISH, establishing reliable chromosome homologies among species and D. melanogaster. The simultaneous analysis of chromosome inversions revealed a distribution pattern for the inversion polymorphisms among Muller's elements in the three species. Element E is the most polymorphic, with many inversions in each species. Element C follows; while the least polymorphic elements are B and D. While interesting, it remains to be determined how general this pattern is among species of the tripunctata group. Despite previous studies showing that D. mediopunctata and D. unipunctata are phylogenetically closer to each other than to D. roehrae, D. unipunctata shows rare karyotypic changes. It has two chromosome fusions: an additional heterochromatic chromosome pair and a pericentric inversion in the X chromosome. This especial conformation suggests a fast chromosomal evolution that deserves further study.

Vespa crabro immunotherapy versus Vespula-venom immunotherapy in Vespa crabro allergy: a comparison study in field re-stings.

PubMed

Macchia, Donatella; Cortellini, Gabriele; Mauro, Marina; Meucci, Elisa; Quercia, Oliviero; Manfredi, Mariangela; Massolo, Alessandro; Valentini, Maurizio; Severino, Maurizio; Passalacqua, Giovanni

2018-01-01

In ascertained allergic sensitization to Vespa crabro (VC) venom, the European guidelines still consider venom immunotherapy (VIT) with Vespula (VE) venom sufficient to achieve an adequate protection against VC. However, antigen 5 immunoblotting studies showed that a genuine sensitization to VC venom may exist. In such cases, a specific VC venom would be preferable for VIT treatment. Since in the last few years, VC venom extracts became available for diagnosis and desensitization, we assessed the efficacy and safety of VIT with a VC-VIT, compared to VE extract. Patients stung by VC, and carefully diagnosed for specific sensitization and indication to VIT underwent a 5-year course of immunotherapy with either VE or VC extracts . The severity of reactions at the first sting (pre-VIT) and after field re-stings (during VIT) were compared. Eighty-three patients, treated with VE extract and 130 patients treated with VC extract completed the 5-year course of VIT. Only a fraction of those patients (43,8%) were field-re-stung by VC: 64 patients on VC VIT and 69 on VE VIT. In the VC VIT group, reactions at re-sting were: 50 negative, 12 large local reactions, 4 systemic reactions (Muller grade I). In this group the VC VIT efficacy was 93,8%. In the VE VIT treated group the reactions at VC re-sting were: 51 negative, 10 large local reactions and 9 systemic reactions (5 Muller I, 3 Mueller III, 1 Muller IV). In this group the overall efficacy of VIT was 87,0%. The difference in efficacy between the two groups was not statistically significant, as previously reported in literature. Nonetheless, field sting systemic reactions Muller III and IV were recorded only in those patients receiving VE VIT. This observation suggests that in patients with ascertained VC-induced allergic reactions a specific VC VIT, where available, would be more adequate, at least concerning the safety profile.

The threshold vs LNT showdown: Dose rate findings exposed flaws in the LNT model part 1. The Russell-Muller debate

DOE Office of Scientific and Technical Information (OSTI.GOV)

Calabrese, Edward J., E-mail: edwardc@schoolph.uma

This paper assesses the discovery of the dose-rate effect in radiation genetics and how it challenged fundamental tenets of the linear non-threshold (LNT) dose response model, including the assumptions that all mutational damage is cumulative and irreversible and that the dose-response is linear at low doses. Newly uncovered historical information also describes how a key 1964 report by the International Commission for Radiological Protection (ICRP) addressed the effects of dose rate in the assessment of genetic risk. This unique story involves assessments by two leading radiation geneticists, Hermann J. Muller and William L. Russell, who independently argued that the report'smore » Genetic Summary Section on dose rate was incorrect while simultaneously offering vastly different views as to what the report's summary should have contained. This paper reveals occurrences of scientific disagreements, how conflicts were resolved, which view(s) prevailed and why. During this process the Nobel Laureate, Muller, provided incorrect information to the ICRP in what appears to have been an attempt to manipulate the decision-making process and to prevent the dose-rate concept from being adopted into risk assessment practices. - Highlights: • The discovery of radiation dose rate challenged the scientific basis of LNT. • Radiation dose rate occurred in males and females. • The dose rate concept supported a threshold dose-response for radiation.« less

Notes on Experiments.

ERIC Educational Resources Information Center

Physics Education, 1989

1989-01-01

Introduced are two experiments: radon detection method shows real data using vacuum cleaner, soft toilet paper, and Geiger-Muller tube; critical potentials measurement describes the operation of Teltron tube with VELA. (YP)

Architecture and implementation considerations of a high-speed Viterbi decoder for a Reed-Muller subcode

NASA Technical Reports Server (NTRS)

Lin, Shu (Principal Investigator); Uehara, Gregory T.; Nakamura, Eric; Chu, Cecilia W. P.

1996-01-01

The (64, 40, 8) subcode of the third-order Reed-Muller (RM) code for high-speed satellite communications is proposed. The RM subcode can be used either alone or as an inner code of a concatenated coding system with the NASA standard (255, 233, 33) Reed-Solomon (RS) code as the outer code to achieve high performance (or low bit-error rate) with reduced decoding complexity. It can also be used as a component code in a multilevel bandwidth efficient coded modulation system to achieve reliable bandwidth efficient data transmission. The progress made toward achieving the goal of implementing a decoder system based upon this code is summarized. The development of the integrated circuit prototype sub-trellis IC, particularly focusing on the design methodology, is addressed.

Actinide Waste Forms and Radiation Effects

NASA Astrophysics Data System (ADS)

Ewing, R. C.; Weber, W. J.

Over the past few decades, many studies of actinides in glasses and ceramics have been conducted that have contributed substantially to the increased understanding of actinide incorporation in solids and radiation effects due to actinide decay. These studies have included fundamental research on actinides in solids and applied research and development related to the immobilization of the high level wastes (HLW) from commercial nuclear power plants and processing of nuclear weapons materials, environmental restoration in the nuclear weapons complex, and the immobilization of weapons-grade plutonium as a result of disarmament activities. Thus, the immobilization of actinides has become a pressing issue for the twenty-first century (Ewing, 1999), and plutonium immobilization, in particular, has received considerable attention in the USA (Muller et al., 2002; Muller and Weber, 2001). The investigation of actinides and

Quenching gas for detectors of charged particles

DOEpatents

Atac, M.

1974-01-22

Operation of detectors of charged particles such as wire counters and Geiger-Muller tubes is improved by filling the counters with a quenching-gas mixture of argon, isobutane and methylchloroform. (Official Gazette)

Error suppression via complementary gauge choices in Reed-Muller codes

NASA Astrophysics Data System (ADS)

Chamberland, Christopher; Jochym-O'Connor, Tomas

2017-09-01

Concatenation of two quantum error-correcting codes with complementary sets of transversal gates can provide a means toward universal fault-tolerant quantum computation. We first show that it is generally preferable to choose the inner code with the higher pseudo-threshold to achieve lower logical failure rates. We then explore the threshold properties of a wide range of concatenation schemes. Notably, we demonstrate that the concatenation of complementary sets of Reed-Muller codes can increase the code capacity threshold under depolarizing noise when compared to extensions of previously proposed concatenation models. We also analyze the properties of logical errors under circuit-level noise, showing that smaller codes perform better for all sampled physical error rates. Our work provides new insights into the performance of universal concatenated quantum codes for both code capacity and circuit-level noise.

Antifeedant compounds from three species of Apiaceae active against the field slug, Deroceras reticulatum (Muller).

PubMed

Birkett, Michael A; Dodds, Catherine J; Henderson, Ian F; Leake, Lucy D; Pickett, John A; Selby, Martin J; Watson, Peter

2004-03-01

Extracts of volatiles from foliage of three plants in the Apiaceae, Conium maculatum L. (hemlock), Coriandrum sativum L. (coriander), and Petroselinum crispum Mill. (Nym.) (parsley), previously shown to exhibit antifeedant activity in assays with the field slug, Deroceras reticulatum (Muller) (Limacidae: Pulmonata), were studied further to identify the active components. Coupled gas chromatography-mass spectrometry (GC-MS) and neurophysiological assays using tentacle nerve preparations resulted in the identification of 11 active compounds from the three extracts. Wheat flour feeding bioassays were used to determine which of these compounds had the highest antifeedant activity. One of the most active compounds was the alkaloid gamma-coniceine, from C. maculatum. The role of potentially toxic alkaloids as semiochemicals and the potential for using such compounds as crop protection agents to prevent slug feeding damage is discussed.

Genetics Home Reference: complement factor I deficiency

MedlinePlus

... F, Zelazko M, Marquart H, Muller K, Sjöholm AG, Truedsson L, Villoutreix BO, Blom AM. Genetic, molecular ... qualified healthcare professional . About Selection Criteria for Links Data Files & API Site Map Subscribe Customer Support USA. ...

The relationship between perceived length and egocentric location in Muller-Lyer figures with one versus two chevrons

NASA Technical Reports Server (NTRS)

Welch, Robert B.; Post, Robert B.; Lum, Wayland; Prinzmetal, William

2004-01-01

We examined the apparent dissociation of perceived length and perceived position with respect to the Muller-Lyer (M-L) illusion. With the traditional (two-chevron) figure, participants made accurate open-loop pointing responses at the endpoints of the shaft, despite the presence of a strong length illusion. This apparently non-Euclidean outcome replicated that of Mack, Heuer, Villardi, and Chambers (1985) and Gillam and Chambers (1985) and contradicts any theory of the M-L illusion in which mislocalization of shaft endpoints plays a role. However, when one of the chevrons was removed, a constant pointing error occurred in the predicted direction, as well as a strong length illusion. Thus, with one-chevron stimuli, perceived length and location were no longer completely dissociated. We speculated that the presence of two opposing chevrons suppresses the mislocalizing effects of a single chevron, especially for figures with relatively short shafts.

Time-resolved electric force microscopy of charge traps in polycrystalline pentacene films

NASA Astrophysics Data System (ADS)

Jaquith, Michael; Muller, Erik; Marohn, John

2006-03-01

The microscopic mechanisms by which charges trap in organic electronic materials are poorly understood. Muller and Marohn recently showed that electric force microscopy (EFM) can be used to image trapped charge in working pentacene thin-film transistors [E. M. Muller et al, Adv. Mater. 17 1410 (2005)]. We have extended their work by imaging trapped charge in pentacene films with much larger grains. In contrast to the previous study in which charge was found to trap inhomogeneously throughout the transistor gap, we find microscopic evidence for a new trapping mechanism in which charges trap predominantly at the pentacene/metal interface in large-grained devices. We have also made localized measurements of the trap growth over time by performing pulsed-gate EFM experiments. Integrated-rate kinetics data supports a charge trap mechanism which is second order in holes, e.g., holes trap in pairs, although the charge-trapping rate appears to depend on gate voltage.

Glial reactions to argon laser photocoagulation injury in rabbit and rat retinas

NASA Astrophysics Data System (ADS)

Humphrey, Martin F.; Chu, Yi; Sharp, Claudia; Moore, Stephen; Mann, Krishna; Rakoczy, Piroska; Constable, Ian J.

1996-04-01

Argon laser photocoagulation is a standard and effective clinical technique for a variety of disease conditions. However there is evidence that coagulation produces more widespread alterations in the retina than the local scarring at the injury site. For example, in diabetic retinopathy multiple photocoagulations in the retinal periphery can control blood vessel growth in the central retina. Therefore we have studied the changes in retinal glial cells following photocoagulation using immunocytochemical techniques with an emphasis on the spread of cellular reactions by using whole, flatmounted retinal preparations. Muller glial cells do not normally express the cytoskeletal protein GFAP (glial fibrillary acidic protein) but do so after a variety of injuries. We found that there is a very widespread expression of GFAP by Muller cells even after very focal coagulations and that this persists for 1 - 1.5 months after coagulation. The microglial cells are primed to react to injury and can release very powerful effector molecules and we therefore also examined the microglial reaction to see whether it correlated with the Muller cell reaction. However, we found that the microglial response, in terms of anatomical changes, was very focally confined to regions of direct cellular injury. We also examined MHC II expression to see whether microglia expressed this activity related protein without anatomical changes but we found no evidence of wide spread changes. In summary we find that inflammatory reactions are very localized after coagulation but the macroglial changes are more widespread and therefore the distant effects of photocoagulation may be more related to macroglial reactions.

Primate Neural Retina Upregulates IL-6 and IL-10 in Response to a Herpes Simplex Vector Suggesting the Presence of a Pro-/Anti-inflammatory Axis

PubMed Central

Sauter, Monica M.; Brandt, Curtis R.

2016-01-01

Injection of herpes simplex virus vectors into the vitreous of primate eyes induces an acute, transient uveitis. The purpose of this study was to characterize innate immune responses of macaque neural retina tissue to the herpes simplex virus type 1-based gene delivery vector hrR3. PCR array analysis demonstrated the induction of the pro-inflammatory cytokine IL-6, as well as the anti-inflammatory cytokine IL-10, following hrR3 exposure. Secretion of IL-6 was detected by ELISA and cone photoreceptors and Muller cells were the predominant IL-6 positive cell types. RNA in situ hybridization confirmed that IL-6 was expressed in photoreceptor and Muller cells. The IL-10 positive cells in the inner nuclear layer were identified as amacrine cells by immunofluorescence staining with calretinin antibody. hrR3 challenge resulted in activation of NFκB (p65) in Muller glial cells, but not in cone photoreceptors, suggesting a novel regulatory mechanism for IL-6 expression in cone cells. hrR3 replication was not required for IL-6 induction or NFκB (p65) activation. These data suggest a pro-inflammatory (IL-6)/anti-inflammatory (IL-10) axis exists in neural retina and the severity of acute posterior uveitis may be determined by this interaction. Further studies are needed to identify the trigger for IL-6 and IL-10 induction and the mechanism of IL-6 induction in cone cells. PMID:27170050

Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution.

PubMed

Leung, Wilson; Shaffer, Christopher D; Reed, Laura K; Smith, Sheryl T; Barshop, William; Dirkes, William; Dothager, Matthew; Lee, Paul; Wong, Jeannette; Xiong, David; Yuan, Han; Bedard, James E J; Machone, Joshua F; Patterson, Seantay D; Price, Amber L; Turner, Bryce A; Robic, Srebrenka; Luippold, Erin K; McCartha, Shannon R; Walji, Tezin A; Walker, Chelsea A; Saville, Kenneth; Abrams, Marita K; Armstrong, Andrew R; Armstrong, William; Bailey, Robert J; Barberi, Chelsea R; Beck, Lauren R; Blaker, Amanda L; Blunden, Christopher E; Brand, Jordan P; Brock, Ethan J; Brooks, Dana W; Brown, Marie; Butzler, Sarah C; Clark, Eric M; Clark, Nicole B; Collins, Ashley A; Cotteleer, Rebecca J; Cullimore, Peterson R; Dawson, Seth G; Docking, Carter T; Dorsett, Sasha L; Dougherty, Grace A; Downey, Kaitlyn A; Drake, Andrew P; Earl, Erica K; Floyd, Trevor G; Forsyth, Joshua D; Foust, Jonathan D; Franchi, Spencer L; Geary, James F; Hanson, Cynthia K; Harding, Taylor S; Harris, Cameron B; Heckman, Jonathan M; Holderness, Heather L; Howey, Nicole A; Jacobs, Dontae A; Jewell, Elizabeth S; Kaisler, Maria; Karaska, Elizabeth A; Kehoe, James L; Koaches, Hannah C; Koehler, Jessica; Koenig, Dana; Kujawski, Alexander J; Kus, Jordan E; Lammers, Jennifer A; Leads, Rachel R; Leatherman, Emily C; Lippert, Rachel N; Messenger, Gregory S; Morrow, Adam T; Newcomb, Victoria; Plasman, Haley J; Potocny, Stephanie J; Powers, Michelle K; Reem, Rachel M; Rennhack, Jonathan P; Reynolds, Katherine R; Reynolds, Lyndsey A; Rhee, Dong K; Rivard, Allyson B; Ronk, Adam J; Rooney, Meghan B; Rubin, Lainey S; Salbert, Luke R; Saluja, Rasleen K; Schauder, Taylor; Schneiter, Allison R; Schulz, Robert W; Smith, Karl E; Spencer, Sarah; Swanson, Bryant R; Tache, Melissa A; Tewilliager, Ashley A; Tilot, Amanda K; VanEck, Eve; Villerot, Matthew M; Vylonis, Megan B; Watson, David T; Wurzler, Juliana A; Wysocki, Lauren M; Yalamanchili, Monica; Zaborowicz, Matthew A; Emerson, Julia A; Ortiz, Carlos; Deuschle, Frederic J; DiLorenzo, Lauren A; Goeller, Katie L; Macchi, Christopher R; Muller, Sarah E; Pasierb, Brittany D; Sable, Joseph E; Tucci, Jessica M; Tynon, Marykathryn; Dunbar, David A; Beken, Levent H; Conturso, Alaina C; Danner, Benjamin L; DeMichele, Gabriella A; Gonzales, Justin A; Hammond, Maureen S; Kelley, Colleen V; Kelly, Elisabeth A; Kulich, Danielle; Mageeney, Catherine M; McCabe, Nikie L; Newman, Alyssa M; Spaeder, Lindsay A; Tumminello, Richard A; Revie, Dennis; Benson, Jonathon M; Cristostomo, Michael C; DaSilva, Paolo A; Harker, Katherine S; Jarrell, Jenifer N; Jimenez, Luis A; Katz, Brandon M; Kennedy, William R; Kolibas, Kimberly S; LeBlanc, Mark T; Nguyen, Trung T; Nicolas, Daniel S; Patao, Melissa D; Patao, Shane M; Rupley, Bryan J; Sessions, Bridget J; Weaver, Jennifer A; Goodman, Anya L; Alvendia, Erica L; Baldassari, Shana M; Brown, Ashley S; Chase, Ian O; Chen, Maida; Chiang, Scott; Cromwell, Avery B; Custer, Ashley F; DiTommaso, Tia M; El-Adaimi, Jad; Goscinski, Nora C; Grove, Ryan A; Gutierrez, Nestor; Harnoto, Raechel S; Hedeen, Heather; Hong, Emily L; Hopkins, Barbara L; Huerta, Vilma F; Khoshabian, Colin; LaForge, Kristin M; Lee, Cassidy T; Lewis, Benjamin M; Lydon, Anniken M; Maniaci, Brian J; Mitchell, Ryan D; Morlock, Elaine V; Morris, William M; Naik, Priyanka; Olson, Nicole C; Osterloh, Jeannette M; Perez, Marcos A; Presley, Jonathan D; Randazzo, Matt J; Regan, Melanie K; Rossi, Franca G; Smith, Melanie A; Soliterman, Eugenia A; Sparks, Ciani J; Tran, Danny L; Wan, Tiffany; Welker, Anne A; Wong, Jeremy N; Sreenivasan, Aparna; Youngblom, Jim; Adams, Andrew; Alldredge, Justin; Bryant, Ashley; Carranza, David; Cifelli, Alyssa; Coulson, Kevin; Debow, Calise; Delacruz, Noelle; Emerson, Charlene; Farrar, Cassandra; Foret, Don; Garibay, Edgar; Gooch, John; Heslop, Michelle; Kaur, Sukhjit; Khan, Ambreen; Kim, Van; Lamb, Travis; Lindbeck, Peter; Lucas, Gabi; Macias, Elizabeth; Martiniuc, Daniela; Mayorga, Lissett; Medina, Joseph; Membreno, Nelson; Messiah, Shady; Neufeld, Lacey; Nguyen, San Francisco; Nichols, Zachary; Odisho, George; Peterson, Daymon; Rodela, Laura; Rodriguez, Priscilla; Rodriguez, Vanessa; Ruiz, Jorge; Sherrill, Will; Silva, Valeria; Sparks, Jeri; Statton, Geeta; Townsend, Ashley; Valdez, Isabel; Waters, Mary; Westphal, Kyle; Winkler, Stacey; Zumkehr, Joannee; DeJong, Randall J; Hoogewerf, Arlene J; Ackerman, Cheri M; Armistead, Isaac O; Baatenburg, Lara; Borr, Matthew J; Brouwer, Lindsay K; Burkhart, Brandon J; Bushhouse, Kelsey T; Cesko, Lejla; Choi, Tiffany Y Y; Cohen, Heather; Damsteegt, Amanda M; Darusz, Jess M; Dauphin, Cory M; Davis, Yelena P; Diekema, Emily J; Drewry, Melissa; Eisen, Michelle E M; Faber, Hayley M; Faber, Katherine J; Feenstra, Elizabeth; Felzer-Kim, Isabella T; Hammond, Brandy L; Hendriksma, Jesse; Herrold, Milton R; Hilbrands, Julia A; Howell, Emily J; Jelgerhuis, Sarah A; Jelsema, Timothy R; Johnson, Benjamin K; Jones, Kelly K; Kim, Anna; Kooienga, Ross D; Menyes, Erika E; Nollet, Eric A; Plescher, Brittany E; Rios, Lindsay; Rose, Jenny L; Schepers, Allison J; Scott, Geoff; Smith, Joshua R; Sterling, Allison M; Tenney, Jenna C; Uitvlugt, Chris; VanDyken, Rachel E; VanderVennen, Marielle; Vue, Samantha; Kokan, Nighat P; Agbley, Kwabea; Boham, Sampson K; Broomfield, Daniel; Chapman, Kayla; Dobbe, Ali; Dobbe, Ian; Harrington, William; Ibrahem, Marwan; Kennedy, Andre; Koplinsky, Chad A; Kubricky, Cassandra; Ladzekpo, Danielle; Pattison, Claire; Ramirez, Roman E; Wande, Lucia; Woehlke, Sarah; Wawersik, Matthew; Kiernan, Elizabeth; Thompson, Jeffrey S; Banker, Roxanne; Bartling, Justina R; Bhatiya, Chinmoy I; Boudoures, Anna L; Christiansen, Lena; Fosselman, Daniel S; French, Kristin M; Gill, Ishwar S; Havill, Jessen T; Johnson, Jaelyn L; Keny, Lauren J; Kerber, John M; Klett, Bethany M; Kufel, Christina N; May, Francis J; Mecoli, Jonathan P; Merry, Callie R; Meyer, Lauren R; Miller, Emily G; Mullen, Gregory J; Palozola, Katherine C; Pfeil, Jacob J; Thomas, Jessica G; Verbofsky, Evan M; Spana, Eric P; Agarwalla, Anant; Chapman, Julia; Chlebina, Ben; Chong, Insun; Falk, I N; Fitzgibbons, John D; Friedman, Harrison; Ighile, Osagie; Kim, Andrew J; Knouse, Kristin A; Kung, Faith; Mammo, Danny; Ng, Chun Leung; Nikam, Vinayak S; Norton, Diana; Pham, Philip; Polk, Jessica W; Prasad, Shreya; Rankin, Helen; Ratliff, Camille D; Scala, Victoria; Schwartz, Nicholas U; Shuen, Jessica A; Xu, Amy; Xu, Thomas Q; Zhang, Yi; Rosenwald, Anne G; Burg, Martin G; Adams, Stephanie J; Baker, Morgan; Botsford, Bobbi; Brinkley, Briana; Brown, Carter; Emiah, Shadie; Enoch, Erica; Gier, Chad; Greenwell, Alyson; Hoogenboom, Lindsay; Matthews, Jordan E; McDonald, Mitchell; Mercer, Amanda; Monsma, Nicholaus; Ostby, Kristine; Ramic, Alen; Shallman, Devon; Simon, Matthew; Spencer, Eric; Tomkins, Trisha; Wendland, Pete; Wylie, Anna; Wolyniak, Michael J; Robertson, Gregory M; Smith, Samuel I; DiAngelo, Justin R; Sassu, Eric D; Bhalla, Satish C; Sharif, Karim A; Choeying, Tenzin; Macias, Jason S; Sanusi, Fareed; Torchon, Karvyn; Bednarski, April E; Alvarez, Consuelo J; Davis, Kristen C; Dunham, Carrie A; Grantham, Alaina J; Hare, Amber N; Schottler, Jennifer; Scott, Zackary W; Kuleck, Gary A; Yu, Nicole S; Kaehler, Marian M; Jipp, Jacob; Overvoorde, Paul J; Shoop, Elizabeth; Cyrankowski, Olivia; Hoover, Betsy; Kusner, Matt; Lin, Devry; Martinov, Tijana; Misch, Jonathan; Salzman, Garrett; Schiedermayer, Holly; Snavely, Michael; Zarrasola, Stephanie; Parrish, Susan; Baker, Atlee; Beckett, Alissa; Belella, Carissa; Bryant, Julie; Conrad, Turner; Fearnow, Adam; Gomez, Carolina; Herbstsomer, Robert A; Hirsch, Sarah; Johnson, Christen; Jones, Melissa; Kabaso, Rita; Lemmon, Eric; Vieira, Carolina Marques Dos Santos; McFarland, Darryl; McLaughlin, Christopher; Morgan, Abbie; Musokotwane, Sepo; Neutzling, William; Nietmann, Jana; Paluskievicz, Christina; Penn, Jessica; Peoples, Emily; Pozmanter, Caitlin; Reed, Emily; Rigby, Nichole; Schmidt, Lasse; Shelton, Micah; Shuford, Rebecca; Tirasawasdichai, Tiara; Undem, Blair; Urick, Damian; Vondy, Kayla; Yarrington, Bryan; Eckdahl, Todd T; Poet, Jeffrey L; Allen, Alica B; Anderson, John E; Barnett, Jason M; Baumgardner, Jordan S; Brown, Adam D; Carney, Jordan E; Chavez, Ramiro A; Christgen, Shelbi L; Christie, Jordan S; Clary, Andrea N; Conn, Michel A; Cooper, Kristen M; Crowley, Matt J; Crowley, Samuel T; Doty, Jennifer S; Dow, Brian A; Edwards, Curtis R; Elder, Darcie D; Fanning, John P; Janssen, Bridget M; Lambright, Anthony K; Lane, Curtiss E; Limle, Austin B; Mazur, Tammy; McCracken, Marly R; McDonough, Alexa M; Melton, Amy D; Minnick, Phillip J; Musick, Adam E; Newhart, William H; Noynaert, Joseph W; Ogden, Bradley J; Sandusky, Michael W; Schmuecker, Samantha M; Shipman, Anna L; Smith, Anna L; Thomsen, Kristen M; Unzicker, Matthew R; Vernon, William B; Winn, Wesley W; Woyski, Dustin S; Zhu, Xiao; Du, Chunguang; Ament, Caitlin; Aso, Soham; Bisogno, Laura Simone; Caronna, Jason; Fefelova, Nadezhda; Lopez, Lenin; Malkowitz, Lorraine; Marra, Jonathan; Menillo, Daniella; Obiorah, Ifeanyi; Onsarigo, Eric Nyabeta; Primus, Shekerah; Soos, Mahdi; Tare, Archana; Zidan, Ameer; Jones, Christopher J; Aronhalt, Todd; Bellush, James M; Burke, Christa; DeFazio, Steve; Does, Benjamin R; Johnson, Todd D; Keysock, Nicholas; Knudsen, Nelson H; Messler, James; Myirski, Kevin; Rekai, Jade Lea; Rempe, Ryan Michael; Salgado, Michael S; Stagaard, Erica; Starcher, Justin R; Waggoner, Andrew W; Yemelyanova, Anastasia K; Hark, Amy T; Bertolet, Anne; Kuschner, Cyrus E; Parry, Kesley; Quach, Michael; Shantzer, Lindsey; Shaw, Mary E; Smith, Mary A; Glenn, Omolara; Mason, Portia; Williams, Charlotte; Key, S Catherine Silver; Henry, Tyneshia C P; Johnson, Ashlee G; White, Jackie X; Haberman, Adam; Asinof, Sam; Drumm, Kelly; Freeburg, Trip; Safa, Nadia; Schultz, Darrin; Shevin, Yakov; Svoronos, Petros; Vuong, Tam; Wellinghoff, Jules; Hoopes, Laura L M; Chau, Kim M; Ward, Alyssa; Regisford, E Gloria C; Augustine, LaJerald; Davis-Reyes, Brionna; Echendu, Vivienne; Hales, Jasmine; Ibarra, Sharon; Johnson, Lauriaun; Ovu, Steven; Braverman, John M; Bahr, Thomas J; Caesar, Nicole M; Campana, Christopher; Cassidy, Daniel W; Cognetti, Peter A; English, Johnathan D; Fadus, Matthew C; Fick, Cameron N; Freda, Philip J; Hennessy, Bryan M; Hockenberger, Kelsey; Jones, Jennifer K; King, Jessica E; Knob, Christopher R; Kraftmann, Karen J; Li, Linghui; Lupey, Lena N; Minniti, Carl J; Minton, Thomas F; Moran, Joseph V; Mudumbi, Krishna; Nordman, Elizabeth C; Puetz, William J; Robinson, Lauren M; Rose, Thomas J; Sweeney, Edward P; Timko, Ashley S; Paetkau, Don W; Eisler, Heather L; Aldrup, Megan E; Bodenberg, Jessica M; Cole, Mara G; Deranek, Kelly M; DeShetler, Megan; Dowd, Rose M; Eckardt, Alexandra K; Ehret, Sharon C; Fese, Jessica; Garrett, Amanda D; Kammrath, Anna; Kappes, Michelle L; Light, Morgan R; Meier, Anne C; O'Rouke, Allison; Perella, Mallory; Ramsey, Kimberley; Ramthun, Jennifer R; Reilly, Mary T; Robinett, Deirdre; Rossi, Nadine L; Schueler, Mary Grace; Shoemaker, Emma; Starkey, Kristin M; Vetor, Ashley; Vrable, Abby; Chandrasekaran, Vidya; Beck, Christopher; Hatfield, Kristen R; Herrick, Douglas A; Khoury, Christopher B; Lea, Charlotte; Louie, Christopher A; Lowell, Shannon M; Reynolds, Thomas J; Schibler, Jeanine; Scoma, Alexandra H; Smith-Gee, Maxwell T; Tuberty, Sarah; Smith, Christopher D; Lopilato, Jane E; Hauke, Jeanette; Roecklein-Canfield, Jennifer A; Corrielus, Maureen; Gilman, Hannah; Intriago, Stephanie; Maffa, Amanda; Rauf, Sabya A; Thistle, Katrina; Trieu, Melissa; Winters, Jenifer; Yang, Bib; Hauser, Charles R; Abusheikh, Tariq; Ashrawi, Yara; Benitez, Pedro; Boudreaux, Lauren R; Bourland, Megan; Chavez, Miranda; Cruz, Samantha; Elliott, GiNell; Farek, Jesse R; Flohr, Sarah; Flores, Amanda H; Friedrichs, Chelsey; Fusco, Zach; Goodwin, Zane; Helmreich, Eric; Kiley, John; Knepper, John Mark; Langner, Christine; Martinez, Megan; Mendoza, Carlos; Naik, Monal; Ochoa, Andrea; Ragland, Nicolas; Raimey, England; Rathore, Sunil; Reza, Evangelina; Sadovsky, Griffin; Seydoux, Marie-Isabelle B; Smith, Jonathan E; Unruh, Anna K; Velasquez, Vicente; Wolski, Matthew W; Gosser, Yuying; Govind, Shubha; Clarke-Medley, Nicole; Guadron, Leslie; Lau, Dawn; Lu, Alvin; Mazzeo, Cheryl; Meghdari, Mariam; Ng, Simon; Pamnani, Brad; Plante, Olivia; Shum, Yuki Kwan Wa; Song, Roy; Johnson, Diana E; Abdelnabi, Mai; Archambault, Alexi; Chamma, Norma; Gaur, Shailly; Hammett, Deborah; Kandahari, Adrese; Khayrullina, Guzal; Kumar, Sonali; Lawrence, Samantha; Madden, Nigel; Mandelbaum, Max; Milnthorp, Heather; Mohini, Shiv; Patel, Roshni; Peacock, Sarah J; Perling, Emily; Quintana, Amber; Rahimi, Michael; Ramirez, Kristen; Singhal, Rishi; Weeks, Corinne; Wong, Tiffany; Gillis, Aubree T; Moore, Zachary D; Savell, Christopher D; Watson, Reece; Mel, Stephanie F; Anilkumar, Arjun A; Bilinski, Paul; Castillo, Rostislav; Closser, Michael; Cruz, Nathalia M; Dai, Tiffany; Garbagnati, Giancarlo F; Horton, Lanor S; Kim, Dongyeon; Lau, Joyce H; Liu, James Z; Mach, Sandy D; Phan, Thu A; Ren, Yi; Stapleton, Kenneth E; Strelitz, Jean M; Sunjed, Ray; Stamm, Joyce; Anderson, Morgan C; Bonifield, Bethany Grace; Coomes, Daniel; Dillman, Adam; Durchholz, Elaine J; Fafara-Thompson, Antoinette E; Gross, Meleah J; Gygi, Amber M; Jackson, Lesley E; Johnson, Amy; Kocsisova, Zuzana; Manghelli, Joshua L; McNeil, Kylie; Murillo, Michael; Naylor, Kierstin L; Neely, Jessica; Ogawa, Emmy E; Rich, Ashley; Rogers, Anna; Spencer, J Devin; Stemler, Kristina M; Throm, Allison A; Van Camp, Matt; Weihbrecht, Katie; Wiles, T Aaron; Williams, Mallory A; Williams, Matthew; Zoll, Kyle; Bailey, Cheryl; Zhou, Leming; Balthaser, Darla M; Bashiri, Azita; Bower, Mindy E; Florian, Kayla A; Ghavam, Nazanin; Greiner-Sosanko, Elizabeth S; Karim, Helmet; Mullen, Victor W; Pelchen, Carly E; Yenerall, Paul M; Zhang, Jiayu; Rubin, Michael R; Arias-Mejias, Suzette M; Bermudez-Capo, Armando G; Bernal-Vega, Gabriela V; Colon-Vazquez, Mariela; Flores-Vazquez, Arelys; Gines-Rosario, Mariela; Llavona-Cartagena, Ivan G; Martinez-Rodriguez, Javier O; Ortiz-Fuentes, Lionel; Perez-Colomba, Eliezer O; Perez-Otero, Joseph; Rivera, Elisandra; Rodriguez-Giron, Luke J; Santiago-Sanabria, Arnaldo J; Senquiz-Gonzalez, Andrea M; delValle, Frank R Soto; Vargas-Franco, Dorianmarie; Velázquez-Soto, Karla I; Zambrana-Burgos, Joan D; Martinez-Cruzado, Juan Carlos; Asencio-Zayas, Lillyann; Babilonia-Figueroa, Kevin; Beauchamp-Pérez, Francis D; Belén-Rodríguez, Juliana; Bracero-Quiñones, Luciann; Burgos-Bula, Andrea P; Collado-Méndez, Xavier A; Colón-Cruz, Luis R; Correa-Muller, Ana I; Crooke-Rosado, Jonathan L; Cruz-García, José M; Defendini-Ávila, Marianna; Delgado-Peraza, Francheska M; Feliciano-Cancela, Alex J; Gónzalez-Pérez, Valerie M; Guiblet, Wilfried; Heredia-Negrón, Aldo; Hernández-Muñiz, Jennifer; Irizarry-González, Lourdes N; Laboy-Corales, Ángel L; Llaurador-Caraballo, Gabriela A; Marín-Maldonado, Frances; Marrero-Llerena, Ulises; Martell-Martínez, Héctor A; Martínez-Traverso, Idaliz M; Medina-Ortega, Kiara N; Méndez-Castellanos, Sonya G; Menéndez-Serrano, Krizia C; Morales-Caraballo, Carol I; Ortiz-DeChoudens, Saryleine; Ortiz-Ortiz, Patricia; Pagán-Torres, Hendrick; Pérez-Afanador, Diana; Quintana-Torres, Enid M; Ramírez-Aponte, Edwin G; Riascos-Cuero, Carolina; Rivera-Llovet, Michelle S; Rivera-Pagán, Ingrid T; Rivera-Vicéns, Ramón E; Robles-Juarbe, Fabiola; Rodríguez-Bonilla, Lorraine; Rodríguez-Echevarría, Brian O; Rodríguez-García, Priscila M; Rodríguez-Laboy, Abneris E; Rodríguez-Santiago, Susana; Rojas-Vargas, Michael L; Rubio-Marrero, Eva N; Santiago-Colón, Albeliz; Santiago-Ortiz, Jorge L; Santos-Ramos, Carlos E; Serrano-González, Joseline; Tamayo-Figueroa, Alina M; Tascón-Peñaranda, Edna P; Torres-Castillo, José L; Valentín-Feliciano, Nelson A; Valentín-Feliciano, Yashira M; Vargas-Barreto, Nadyan M; Vélez-Vázquez, Miguel; Vilanova-Vélez, Luis R; Zambrana-Echevarría, Cristina; MacKinnon, Christy; Chung, Hui-Min; Kay, Chris; Pinto, Anthony; Kopp, Olga R; Burkhardt, Joshua; Harward, Chris; Allen, Robert; Bhat, Pavan; Chang, Jimmy Hsiang-Chun; 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Giddens, Michelle M; McNeil, Gerard P; Adebayo, Adeola; Bagaeva, Kate; Chinwong, Justina; Dol, Chrystel; George, Eunice; Haltaufderhyde, Kirk; Haye, Joanna; Kaur, Manpreet; Semon, Max; Serjanov, Dmitri; Toorie, Anika; Wilson, Christopher; Riddle, Nicole C; Buhler, Jeremy; Mardis, Elaine R; Elgin, Sarah C R

2015-03-04

The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25-50%) than euchromatic reference regions (3-11%). Among the F elements, D. grimshawi has the lowest transposon density (particularly DINE-1: 2% vs. 11-27%). F element genes have larger coding spans, more coding exons, larger introns, and lower codon bias. Comparison of the Effective Number of Codons with the Codon Adaptation Index shows that, in contrast to the other species, codon bias in D. grimshawi F element genes can be attributed primarily to selection instead of mutational biases, suggesting that density and types of transposons affect the degree of local heterochromatin formation. F element genes have lower estimated DNA melting temperatures than D element genes, potentially facilitating transcription through heterochromatin. Most F element genes (~90%) have remained on that element, but the F element has smaller syntenic blocks than genome averages (3.4-3.6 vs. 8.4-8.8 genes per block), indicating greater rates of inversion despite lower rates of recombination. Overall, the F element has maintained characteristics that are distinct from other autosomes in the Drosophila lineage, illuminating the constraints imposed by a heterochromatic milieu. Copyright © 2015 Leung et al.

Multivariate test power approximations for balanced linear mixed models in studies with missing data.

PubMed

Ringham, Brandy M; Kreidler, Sarah M; Muller, Keith E; Glueck, Deborah H

2016-07-30

Multilevel and longitudinal studies are frequently subject to missing data. For example, biomarker studies for oral cancer may involve multiple assays for each participant. Assays may fail, resulting in missing data values that can be assumed to be missing completely at random. Catellier and Muller proposed a data analytic technique to account for data missing at random in multilevel and longitudinal studies. They suggested modifying the degrees of freedom for both the Hotelling-Lawley trace F statistic and its null case reference distribution. We propose parallel adjustments to approximate power for this multivariate test in studies with missing data. The power approximations use a modified non-central F statistic, which is a function of (i) the expected number of complete cases, (ii) the expected number of non-missing pairs of responses, or (iii) the trimmed sample size, which is the planned sample size reduced by the anticipated proportion of missing data. The accuracy of the method is assessed by comparing the theoretical results to the Monte Carlo simulated power for the Catellier and Muller multivariate test. Over all experimental conditions, the closest approximation to the empirical power of the Catellier and Muller multivariate test is obtained by adjusting power calculations with the expected number of complete cases. The utility of the method is demonstrated with a multivariate power analysis for a hypothetical oral cancer biomarkers study. We describe how to implement the method using standard, commercially available software products and give example code. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

A Dialectic for Network Centric Warfare

DTIC Science & Technology

2005-06-01

scientific realism through Salmon (1966), Popper (1934) and Kuhn (1962) to the epistemological anarchism of Feyerabend (1975). In this paper, we use an...Factors Society. Feyerabend , P. (1975), Against Method, Verso, London. Fischer, K., Muller, J.P. and Pischel, M. (1996). Cooperative

Suitability of thirteen different host species for elm leaf beetle, Xanthogaleruca luteola (Coleoptera: Chrysomelidae)

Treesearch

Richard W. Hall; Alden M. Townsend; Jack H. Barger

1987-01-01

Thirteen different host species for elm leaf beetle, Xanthogaleruca luteola (Muller), were assayed to determine their relative suitability. Species examined were Ulmus parvifolia Jacq., U. thomasii Sarg., U. laevis Pall., U. wilsoniana Schneid., U....

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Shannon L.; Minogue, Timothy D.; Teshima, Hazuki

Bacillus cereus strain 03BB87, a blood culture isolate, originated in a 56-year-old male muller operator with a fatal case of pneumonia in 2003. Here we present the finished genome sequence of that pathogen, including a 5.46-Mb chromosome and two plasmids (209 and 52 Kb, respectively).

The Future Revisited

ERIC Educational Resources Information Center

McConnell, R. A.

1970-01-01

Indicates why selective breeding for intelligence is biologically practical and suggests that positive eugenics is the only answer now available to our need for more intelligence. Procedure does not seem immoral. Quotes H. J. Muller's values to be recognized in eugenic planning." Does not prescribe program. (AL)

Molecular Probes in Marine Ecology: Concepts, Techniques and Applications

DTIC Science & Technology

1990-03-12

MUM genotypes. 7/11 Gisele Muller- Symbioses between cnidarians and zooxanthellae . Parker 7/12 Dror Angel The ecology of colonial radiolarians. 7/13...alaae, coral. covepods. microflaaellates. dinoflacellates) (Rob Rovan). Isolate organisms and prepare DNA. Amplify rDNA usina universal (or zooxanthella

Drosophila Muller F Elements Maintain a Distinct Set of Genomic Properties Over 40 Million Years of Evolution

PubMed Central

Leung, Wilson; Shaffer, Christopher D.; Reed, Laura K.; Smith, Sheryl T.; Barshop, William; Dirkes, William; Dothager, Matthew; Lee, Paul; Wong, Jeannette; Xiong, David; Yuan, Han; Bedard, James E. J.; Machone, Joshua F.; Patterson, Seantay D.; Price, Amber L.; Turner, Bryce A.; Robic, Srebrenka; Luippold, Erin K.; McCartha, Shannon R.; Walji, Tezin A.; Walker, Chelsea A.; Saville, Kenneth; Abrams, Marita K.; Armstrong, Andrew R.; Armstrong, William; Bailey, Robert J.; Barberi, Chelsea R.; Beck, Lauren R.; Blaker, Amanda L.; Blunden, Christopher E.; Brand, Jordan P.; Brock, Ethan J.; Brooks, Dana W.; Brown, Marie; Butzler, Sarah C.; Clark, Eric M.; Clark, Nicole B.; Collins, Ashley A.; Cotteleer, Rebecca J.; Cullimore, Peterson R.; Dawson, Seth G.; Docking, Carter T.; Dorsett, Sasha L.; Dougherty, Grace A.; Downey, Kaitlyn A.; Drake, Andrew P.; Earl, Erica K.; Floyd, Trevor G.; Forsyth, Joshua D.; Foust, Jonathan D.; Franchi, Spencer L.; Geary, James F.; Hanson, Cynthia K.; Harding, Taylor S.; Harris, Cameron B.; Heckman, Jonathan M.; Holderness, Heather L.; Howey, Nicole A.; Jacobs, Dontae A.; Jewell, Elizabeth S.; Kaisler, Maria; Karaska, Elizabeth A.; Kehoe, James L.; Koaches, Hannah C.; Koehler, Jessica; Koenig, Dana; Kujawski, Alexander J.; Kus, Jordan E.; Lammers, Jennifer A.; Leads, Rachel R.; Leatherman, Emily C.; Lippert, Rachel N.; Messenger, Gregory S.; Morrow, Adam T.; Newcomb, Victoria; Plasman, Haley J.; Potocny, Stephanie J.; Powers, Michelle K.; Reem, Rachel M.; Rennhack, Jonathan P.; Reynolds, Katherine R.; Reynolds, Lyndsey A.; Rhee, Dong K.; Rivard, Allyson B.; Ronk, Adam J.; Rooney, Meghan B.; Rubin, Lainey S.; Salbert, Luke R.; Saluja, Rasleen K.; Schauder, Taylor; Schneiter, Allison R.; Schulz, Robert W.; Smith, Karl E.; Spencer, Sarah; Swanson, Bryant R.; Tache, Melissa A.; Tewilliager, Ashley A.; Tilot, Amanda K.; VanEck, Eve; Villerot, Matthew M.; Vylonis, Megan B.; Watson, David T.; Wurzler, Juliana A.; Wysocki, Lauren M.; Yalamanchili, Monica; Zaborowicz, Matthew A.; Emerson, Julia A.; Ortiz, Carlos; Deuschle, Frederic J.; DiLorenzo, Lauren A.; Goeller, Katie L.; Macchi, Christopher R.; Muller, Sarah E.; Pasierb, Brittany D.; Sable, Joseph E.; Tucci, Jessica M.; Tynon, Marykathryn; Dunbar, David A.; Beken, Levent H.; Conturso, Alaina C.; Danner, Benjamin L.; DeMichele, Gabriella A.; Gonzales, Justin A.; Hammond, Maureen S.; Kelley, Colleen V.; Kelly, Elisabeth A.; Kulich, Danielle; Mageeney, Catherine M.; McCabe, Nikie L.; Newman, Alyssa M.; Spaeder, Lindsay A.; Tumminello, Richard A.; Revie, Dennis; Benson, Jonathon M.; Cristostomo, Michael C.; DaSilva, Paolo A.; Harker, Katherine S.; Jarrell, Jenifer N.; Jimenez, Luis A.; Katz, Brandon M.; Kennedy, William R.; Kolibas, Kimberly S.; LeBlanc, Mark T.; Nguyen, Trung T.; Nicolas, Daniel S.; Patao, Melissa D.; Patao, Shane M.; Rupley, Bryan J.; Sessions, Bridget J.; Weaver, Jennifer A.; Goodman, Anya L.; Alvendia, Erica L.; Baldassari, Shana M.; Brown, Ashley S.; Chase, Ian O.; Chen, Maida; Chiang, Scott; Cromwell, Avery B.; Custer, Ashley F.; DiTommaso, Tia M.; El-Adaimi, Jad; Goscinski, Nora C.; Grove, Ryan A.; Gutierrez, Nestor; Harnoto, Raechel S.; Hedeen, Heather; Hong, Emily L.; Hopkins, Barbara L.; Huerta, Vilma F.; Khoshabian, Colin; LaForge, Kristin M.; Lee, Cassidy T.; Lewis, Benjamin M.; Lydon, Anniken M.; Maniaci, Brian J.; Mitchell, Ryan D.; Morlock, Elaine V.; Morris, William M.; Naik, Priyanka; Olson, Nicole C.; Osterloh, Jeannette M.; Perez, Marcos A.; Presley, Jonathan D.; Randazzo, Matt J.; Regan, Melanie K.; Rossi, Franca G.; Smith, Melanie A.; Soliterman, Eugenia A.; Sparks, Ciani J.; Tran, Danny L.; Wan, Tiffany; Welker, Anne A.; Wong, Jeremy N.; Sreenivasan, Aparna; Youngblom, Jim; Adams, Andrew; Alldredge, Justin; Bryant, Ashley; Carranza, David; Cifelli, Alyssa; Coulson, Kevin; Debow, Calise; Delacruz, Noelle; Emerson, Charlene; Farrar, Cassandra; Foret, Don; Garibay, Edgar; Gooch, John; Heslop, Michelle; Kaur, Sukhjit; Khan, Ambreen; Kim, Van; Lamb, Travis; Lindbeck, Peter; Lucas, Gabi; Macias, Elizabeth; Martiniuc, Daniela; Mayorga, Lissett; Medina, Joseph; Membreno, Nelson; Messiah, Shady; Neufeld, Lacey; Nguyen, San Francisco; Nichols, Zachary; Odisho, George; Peterson, Daymon; Rodela, Laura; Rodriguez, Priscilla; Rodriguez, Vanessa; Ruiz, Jorge; Sherrill, Will; Silva, Valeria; Sparks, Jeri; Statton, Geeta; Townsend, Ashley; Valdez, Isabel; Waters, Mary; Westphal, Kyle; Winkler, Stacey; Zumkehr, Joannee; DeJong, Randall J.; Hoogewerf, Arlene J.; Ackerman, Cheri M.; Armistead, Isaac O.; Baatenburg, Lara; Borr, Matthew J.; Brouwer, Lindsay K.; Burkhart, Brandon J.; Bushhouse, Kelsey T.; Cesko, Lejla; Choi, Tiffany Y. 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Johnson, Christen; Jones, Melissa; Kabaso, Rita; Lemmon, Eric; Vieira, Carolina Marques dos Santos; McFarland, Darryl; McLaughlin, Christopher; Morgan, Abbie; Musokotwane, Sepo; Neutzling, William; Nietmann, Jana; Paluskievicz, Christina; Penn, Jessica; Peoples, Emily; Pozmanter, Caitlin; Reed, Emily; Rigby, Nichole; Schmidt, Lasse; Shelton, Micah; Shuford, Rebecca; Tirasawasdichai, Tiara; Undem, Blair; Urick, Damian; Vondy, Kayla; Yarrington, Bryan; Eckdahl, Todd T.; Poet, Jeffrey L.; Allen, Alica B.; Anderson, John E.; Barnett, Jason M.; Baumgardner, Jordan S.; Brown, Adam D.; Carney, Jordan E.; Chavez, Ramiro A.; Christgen, Shelbi L.; Christie, Jordan S.; Clary, Andrea N.; Conn, Michel A.; Cooper, Kristen M.; Crowley, Matt J.; Crowley, Samuel T.; Doty, Jennifer S.; Dow, Brian A.; Edwards, Curtis R.; Elder, Darcie D.; Fanning, John P.; Janssen, Bridget M.; Lambright, Anthony K.; Lane, Curtiss E.; Limle, Austin B.; Mazur, Tammy; McCracken, Marly R.; McDonough, Alexa M.; Melton, Amy D.; Minnick, Phillip J.; Musick, Adam E.; Newhart, William H.; Noynaert, Joseph W.; Ogden, Bradley J.; Sandusky, Michael W.; Schmuecker, Samantha M.; Shipman, Anna L.; Smith, Anna L.; Thomsen, Kristen M.; Unzicker, Matthew R.; Vernon, William B.; Winn, Wesley W.; Woyski, Dustin S.; Zhu, Xiao; Du, Chunguang; Ament, Caitlin; Aso, Soham; Bisogno, Laura Simone; Caronna, Jason; Fefelova, Nadezhda; Lopez, Lenin; Malkowitz, Lorraine; Marra, Jonathan; Menillo, Daniella; Obiorah, Ifeanyi; Onsarigo, Eric Nyabeta; Primus, Shekerah; Soos, Mahdi; Tare, Archana; Zidan, Ameer; Jones, Christopher J.; Aronhalt, Todd; Bellush, James M.; Burke, Christa; DeFazio, Steve; Does, Benjamin R.; Johnson, Todd D.; Keysock, Nicholas; Knudsen, Nelson H.; Messler, James; Myirski, Kevin; Rekai, Jade Lea; Rempe, Ryan Michael; Salgado, Michael S.; Stagaard, Erica; Starcher, Justin R.; Waggoner, Andrew W.; Yemelyanova, Anastasia K.; Hark, Amy T.; Bertolet, Anne; Kuschner, Cyrus E.; Parry, Kesley; Quach, Michael; Shantzer, Lindsey; Shaw, Mary E.; Smith, Mary A.; Glenn, Omolara; Mason, Portia; Williams, Charlotte; Key, S. Catherine Silver; Henry, Tyneshia C. P.; Johnson, Ashlee G.; White, Jackie X.; Haberman, Adam; Asinof, Sam; Drumm, Kelly; Freeburg, Trip; Safa, Nadia; Schultz, Darrin; Shevin, Yakov; Svoronos, Petros; Vuong, Tam; Wellinghoff, Jules; Hoopes, Laura L. M.; Chau, Kim M.; Ward, Alyssa; Regisford, E. Gloria C.; Augustine, LaJerald; Davis-Reyes, Brionna; Echendu, Vivienne; Hales, Jasmine; Ibarra, Sharon; Johnson, Lauriaun; Ovu, Steven; Braverman, John M.; Bahr, Thomas J.; Caesar, Nicole M.; Campana, Christopher; Cassidy, Daniel W.; Cognetti, Peter A.; English, Johnathan D.; Fadus, Matthew C.; Fick, Cameron N.; Freda, Philip J.; Hennessy, Bryan M.; Hockenberger, Kelsey; Jones, Jennifer K.; King, Jessica E.; Knob, Christopher R.; Kraftmann, Karen J.; Li, Linghui; Lupey, Lena N.; Minniti, Carl J.; Minton, Thomas F.; Moran, Joseph V.; Mudumbi, Krishna; Nordman, Elizabeth C.; Puetz, William J.; Robinson, Lauren M.; Rose, Thomas J.; Sweeney, Edward P.; Timko, Ashley S.; Paetkau, Don W.; Eisler, Heather L.; Aldrup, Megan E.; Bodenberg, Jessica M.; Cole, Mara G.; Deranek, Kelly M.; DeShetler, Megan; Dowd, Rose M.; Eckardt, Alexandra K.; Ehret, Sharon C.; Fese, Jessica; Garrett, Amanda D.; Kammrath, Anna; Kappes, Michelle L.; Light, Morgan R.; Meier, Anne C.; O’Rouke, Allison; Perella, Mallory; Ramsey, Kimberley; Ramthun, Jennifer R.; Reilly, Mary T.; Robinett, Deirdre; Rossi, Nadine L.; Schueler, Mary Grace; Shoemaker, Emma; Starkey, Kristin M.; Vetor, Ashley; Vrable, Abby; Chandrasekaran, Vidya; Beck, Christopher; Hatfield, Kristen R.; Herrick, Douglas A.; Khoury, Christopher B.; Lea, Charlotte; Louie, Christopher A.; Lowell, Shannon M.; Reynolds, Thomas J.; Schibler, Jeanine; Scoma, Alexandra H.; Smith-Gee, Maxwell T.; Tuberty, Sarah; Smith, Christopher D.; Lopilato, Jane E.; Hauke, Jeanette; Roecklein-Canfield, Jennifer A.; Corrielus, Maureen; Gilman, Hannah; Intriago, Stephanie; Maffa, Amanda; Rauf, Sabya A.; Thistle, Katrina; Trieu, Melissa; Winters, Jenifer; Yang, Bib; Hauser, Charles R.; Abusheikh, Tariq; Ashrawi, Yara; Benitez, Pedro; Boudreaux, Lauren R.; Bourland, Megan; Chavez, Miranda; Cruz, Samantha; Elliott, GiNell; Farek, Jesse R.; Flohr, Sarah; Flores, Amanda H.; Friedrichs, Chelsey; Fusco, Zach; Goodwin, Zane; Helmreich, Eric; Kiley, John; Knepper, John Mark; Langner, Christine; Martinez, Megan; Mendoza, Carlos; Naik, Monal; Ochoa, Andrea; Ragland, Nicolas; Raimey, England; Rathore, Sunil; Reza, Evangelina; Sadovsky, Griffin; Seydoux, Marie-Isabelle B.; Smith, Jonathan E.; Unruh, Anna K.; Velasquez, Vicente; Wolski, Matthew W.; Gosser, Yuying; Govind, Shubha; Clarke-Medley, Nicole; Guadron, Leslie; Lau, Dawn; Lu, Alvin; Mazzeo, Cheryl; Meghdari, Mariam; Ng, Simon; Pamnani, Brad; Plante, Olivia; Shum, Yuki Kwan Wa; Song, Roy; Johnson, Diana E.; Abdelnabi, Mai; Archambault, Alexi; Chamma, Norma; Gaur, Shailly; Hammett, Deborah; Kandahari, Adrese; Khayrullina, Guzal; Kumar, Sonali; Lawrence, Samantha; Madden, Nigel; Mandelbaum, Max; Milnthorp, Heather; Mohini, Shiv; Patel, Roshni; Peacock, Sarah J.; Perling, Emily; Quintana, Amber; Rahimi, Michael; Ramirez, Kristen; Singhal, Rishi; Weeks, Corinne; Wong, Tiffany; Gillis, Aubree T.; Moore, Zachary D.; Savell, Christopher D.; Watson, Reece; Mel, Stephanie F.; Anilkumar, Arjun A.; Bilinski, Paul; Castillo, Rostislav; Closser, Michael; Cruz, Nathalia M.; Dai, Tiffany; Garbagnati, Giancarlo F.; Horton, Lanor S.; Kim, Dongyeon; Lau, Joyce H.; Liu, James Z.; Mach, Sandy D.; Phan, Thu A.; Ren, Yi; Stapleton, Kenneth E.; Strelitz, Jean M.; Sunjed, Ray; Stamm, Joyce; Anderson, Morgan C.; Bonifield, Bethany Grace; Coomes, Daniel; Dillman, Adam; Durchholz, Elaine J.; Fafara-Thompson, Antoinette E.; Gross, Meleah J.; Gygi, Amber M.; Jackson, Lesley E.; Johnson, Amy; Kocsisova, Zuzana; Manghelli, Joshua L.; McNeil, Kylie; Murillo, Michael; Naylor, Kierstin L.; Neely, Jessica; Ogawa, Emmy E.; Rich, Ashley; Rogers, Anna; Spencer, J. Devin; Stemler, Kristina M.; Throm, Allison A.; Van Camp, Matt; Weihbrecht, Katie; Wiles, T. Aaron; Williams, Mallory A.; Williams, Matthew; Zoll, Kyle; Bailey, Cheryl; Zhou, Leming; Balthaser, Darla M.; Bashiri, Azita; Bower, Mindy E.; Florian, Kayla A.; Ghavam, Nazanin; Greiner-Sosanko, Elizabeth S.; Karim, Helmet; Mullen, Victor W.; Pelchen, Carly E.; Yenerall, Paul M.; Zhang, Jiayu; Rubin, Michael R.; Arias-Mejias, Suzette M.; Bermudez-Capo, Armando G.; Bernal-Vega, Gabriela V.; Colon-Vazquez, Mariela; Flores-Vazquez, Arelys; Gines-Rosario, Mariela; Llavona-Cartagena, Ivan G.; Martinez-Rodriguez, Javier O.; Ortiz-Fuentes, Lionel; Perez-Colomba, Eliezer O.; Perez-Otero, Joseph; Rivera, Elisandra; Rodriguez-Giron, Luke J.; Santiago-Sanabria, Arnaldo J.; Senquiz-Gonzalez, Andrea M.; delValle, Frank R. 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2015-01-01

The Muller F element (4.2 Mb, ~80 protein-coding genes) is an unusual autosome of Drosophila melanogaster; it is mostly heterochromatic with a low recombination rate. To investigate how these properties impact the evolution of repeats and genes, we manually improved the sequence and annotated the genes on the D. erecta, D. mojavensis, and D. grimshawi F elements and euchromatic domains from the Muller D element. We find that F elements have greater transposon density (25–50%) than euchromatic reference regions (3–11%). Among the F elements, D. grimshawi has the lowest transposon density (particularly DINE-1: 2% vs. 11–27%). F element genes have larger coding spans, more coding exons, larger introns, and lower codon bias. Comparison of the Effective Number of Codons with the Codon Adaptation Index shows that, in contrast to the other species, codon bias in D. grimshawi F element genes can be attributed primarily to selection instead of mutational biases, suggesting that density and types of transposons affect the degree of local heterochromatin formation. F element genes have lower estimated DNA melting temperatures than D element genes, potentially facilitating transcription through heterochromatin. Most F element genes (~90%) have remained on that element, but the F element has smaller syntenic blocks than genome averages (3.4–3.6 vs. 8.4–8.8 genes per block), indicating greater rates of inversion despite lower rates of recombination. Overall, the F element has maintained characteristics that are distinct from other autosomes in the Drosophila lineage, illuminating the constraints imposed by a heterochromatic milieu. PMID:25740935

Perspectives on Europe: Language Issues and Language Planning in Europe.

ERIC Educational Resources Information Center

Liddicoat, Anthony J., Ed.; Muller, Karis, Ed.

This collection of papers includes the following: "Language Issues and Language Planning in Europe" (Anthony J. Liddicoat and Karis Muller); "Language and National Identity" (Peter M. Hill); "Language Planning, Linguistic Diversity and Democracy in Europe" (Anthony J. Liddicoat); "Language Competition in European…

André B. Muller (25.9.1918-1.4.2006)

NASA Astrophysics Data System (ADS)

West, R. M.

2006-06-01

With great sadness, we have learned about the death of André Muller on 1 April, at the age of 87. Living in retirement in his native Holland since 1983, he was one of ESOs true pioneers, an outstanding representative of the select group of European astronomers who succeeded in steering ESO through the difficult initial phases. André was close-ly associated with the entire process, from the first site monitoring programmes in South Africa to the subsequent search in Chile, the decision in favour of the La Silla site, as well as the management of ESOs early activities in Chile, includ-ing the construction of the headquarters and observatory and the installation of the first generation of ESO telescopes. Few persons, if any, have been so inti-mately connected to the setting-up of ESOs facilities and it would be impossible to list in detail all of the services André performed for the organisation with such great expertise and zeal during his long career.

Sorting of colors in the retina

NASA Astrophysics Data System (ADS)

Ribak, Erez; Labin, Amichai; Safuri, Shadi; Perlman, Ido

2015-03-01

Our image of the world is detected by photoreceptors, lying at the bottom of the nearly-transparent retina. Lateral neural layers for processing the image temporally, spectrally, and spatially come in front the photoreceptors, not behind them. This reverse order is a long-standing puzzle, which we wish to explain. We found out that cone photoreceptors are attached to metabolic Muller cells which span the retina. Cones provide colour vision at day time, and are surrounded by sensitive rods which function at night. We showed by an analytical and a computational method that the Müller cells also serve as fibre optics, concentrating green-red light into the cones, while the excessive blue is scattered to the nearby rods. Spatial and spectral laboratory measurements validate that indeed the shapes and refractive index values of the Muller cells and the surrounding retina separate the colours according to the spectral sensitivities of both cones and rods. These results also explain other effects of vision acuity and colour sensitivity.

Nonuniform code concatenation for universal fault-tolerant quantum computing

NASA Astrophysics Data System (ADS)

Nikahd, Eesa; Sedighi, Mehdi; Saheb Zamani, Morteza

2017-09-01

Using transversal gates is a straightforward and efficient technique for fault-tolerant quantum computing. Since transversal gates alone cannot be computationally universal, they must be combined with other approaches such as magic state distillation, code switching, or code concatenation to achieve universality. In this paper we propose an alternative approach for universal fault-tolerant quantum computing, mainly based on the code concatenation approach proposed in [T. Jochym-O'Connor and R. Laflamme, Phys. Rev. Lett. 112, 010505 (2014), 10.1103/PhysRevLett.112.010505], but in a nonuniform fashion. The proposed approach is described based on nonuniform concatenation of the 7-qubit Steane code with the 15-qubit Reed-Muller code, as well as the 5-qubit code with the 15-qubit Reed-Muller code, which lead to two 49-qubit and 47-qubit codes, respectively. These codes can correct any arbitrary single physical error with the ability to perform a universal set of fault-tolerant gates, without using magic state distillation.

77 FR 3790 - Notice of Competitive Coal Lease Sale, Wyoming

Federal Register 2010, 2011, 2012, 2013, 2014

2012-01-25

...] Notice of Competitive Coal Lease Sale, Wyoming AGENCY: Bureau of Land Management, Interior. ACTION: Notice. SUMMARY: Notice is hereby given that certain coal resources in the South Porcupine Coal Tract... Muller Ogle, Coal Coordinator, at (307) 775-6258, and (307) 775- 6206, respectively. SUPPLEMENTARY...

77 FR 31385 - Notice of Competitive Coal Lease Sale, Wyoming

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-25

...] Notice of Competitive Coal Lease Sale, Wyoming AGENCY: Bureau of Land Management, Interior. ACTION: Notice. SUMMARY: Notice is hereby given that certain coal resources in the North Porcupine Coal Tract... Muller Ogle, Coal Coordinator, at 307-775-6258, and 307-775-6206, respectively. SUPPLEMENTARY INFORMATION...

Technological Innovation in the 80's.

ERIC Educational Resources Information Center

Coles, James S., Ed.

This six-chapter book presents background papers used by participants at a meeting designed to examine the prospects for and roadblocks to scientific and technological innovations as the 21st century is approached. They include: (1) "Research Universities and Industrial Innovation in America" (Steven Muller); (2) "The Role of…

Exploratorium: Exploring Water.

ERIC Educational Resources Information Center

Brand, Judith, Ed.

2001-01-01

This issue of Exploratorium focuses on water and its varied uses in our environment. Articles include: (1) "Adventures with Water" (Eric Muller); (2) "Water: The Liquid of Life" (Karen E. Kalumuck); (3) "Water-Drop Projector" (Gorazd Planinsic); (4) "Waterways and Means" (Pearl Tesler); (5) "Explore Natural Phenomena in the Museum--and Just…

78 FR 48461 - Notice of Competitive Coal Lease Sale, WYW172684, Wyoming

Federal Register 2010, 2011, 2012, 2013, 2014

2013-08-08

...] Notice of Competitive Coal Lease Sale, WYW172684, Wyoming AGENCY: Bureau of Land Management, Interior. ACTION: Notice. SUMMARY: Notice is hereby given that certain coal resources in the Hay Creek II Coal..., or Kathy Muller Ogle, Coal Coordinator, at 307-775-6258, and 307-775-6206, respectively...

Powerful Knowledge: Insights from Music's Case

ERIC Educational Resources Information Center

McPhail, Graham J.

2017-01-01

This paper examines Young and Muller's elaboration of Michael Young's concept of powerful knowledge and considers music's alignment with the characteristics theorised as distinguishing this type of knowledge. Consideration of the concept in relation to music may be timely as music teachers continue to grapple with the problem of knowing what…

Elm leaf beetle performance on ozone-fumigated elm

Treesearch

Jack H. Barger; Richard W. Hall; Alden M. Townsend; Alden M. Townsend

1992-01-01

Leaves (1986) from elm hybrids ('Pioneer', 'Homestead', '970') previously fumigated in open-top chambers with ozone or with charcoal-filtered air (CFA) were evaluated for water and nitrogen content or were fed to adult elm leaf beetles (ELB), Xanthogaleruca = (Pyrrhallta) luteola (Muller), to determine host suitability for beetle fecundity...

Hermann Muller and Mutations in Drosophila

Science.gov Websites

&D Nuggets Database dropdown arrow Search Tag Cloud Browse Reports Database Help Finding Aids Studies on Drosophila; DOE Technical Report; 1958 The Influence of Radiation in Altering the Incidence of September 15, 1960 to September 14, 1961; DOE Technical Report; 1960 The Influence of Radiation in Altering

Teaching, Teacher Formation, and Specialised Professional Practice

ERIC Educational Resources Information Center

Hordern, Jim

2015-01-01

This paper starts by exploring the relevance of Bernstein's work on vertical and horizontal discourses and the constitution of professional knowledge for conceptualisation of the knowledge needed for teaching practice. Building on arguments for the differentiated nature of knowledge, and drawing on the work of Winch, Young and Muller on expertise,…

World Perspective Case Descriptions on Educational Programs for Adults: Federal Republic of Germany.

ERIC Educational Resources Information Center

Bugl, Helmut; And Others

This document contains the following case studies of West German adult education projects: (1) Counseling Courses in Agriculture (Bugl, Fehrenbach-Neumann); (2) The State Center for Political Education in Baden-Wurttemberg (Schiele); (3) Catholic Educational Organization Rottweil (Muller); (4) Adult Education Center--Herrenberg (Werner); (5)…

EXPOSURE OF CULTURED MYOCYTES TO ZINC RESULTS IN ALTERED BEAT RATE AND INTERCELLULAR COMMUNICATION.

EPA Science Inventory

Exposure of cultured myocytes to zinc results in altered beat rate and intercellular communication

Graff, Donald W, Devlin, Robert B, Brackhan, Joseph A, Muller-Borer, Barbara J, Bowman, Jill S, Cascio, Wayne E.

Exposure to ambient air pollution particulate matter (...

The Absolute Measurement of Beta Activities; SOBRE LA MEDIDA ABSOLUTA DE ACTIVIDADES BETA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Del Rio, C.S.; Reynaldo, O.J.; Mayquez, E.R.

1956-01-01

A new method for the absolute beta counting of solid samples is given. The measurements are made with an inside Geiger-Muller tube of new construction. The backscattering correction, when using an "infinite" thick mounting, is discussed and results for different materials given. (auth)

78 FR 41946 - Notice of Competitive Coal Lease Sale Maysdorf II North, WY

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-12

...] Notice of Competitive Coal Lease Sale Maysdorf II North, WY AGENCY: Bureau of Land Management, Interior. ACTION: Notice. SUMMARY: Notice is hereby given that certain coal resources in the Maysdorf II North Coal..., Land Law Examiner, or Kathy Muller Ogle, Coal Coordinator, at 307-775-6258, and 307-775-6206...

Presenting International Literature through Author Studies and Author Pairings.

ERIC Educational Resources Information Center

Lynch-Brown, Carol; Tomlinson, Carl M.

1997-01-01

Discusses the value of international books as a source of literature for middle school students. Considers the benefits of international books, and instructional strategies including focusing on an international author and author pairings. Provides an annotated list of works by Robin Klein, John Marsden, Uri Orlev, Anthony Browne, and Jorg Muller.…

Mid-Atlantic Crossings: Some Texts That Emerged from Dartmouth

ERIC Educational Resources Information Center

Sawyer, Wayne; Davies, Larissa McLean; Gannon, Susanne; Dowsett, Patricia

2016-01-01

In the British "zone" of the English education world, which Australia largely inhabited throughout the 20th century, the key book that came out of Dartmouth was John Dixon's "Growth through English." Some in the British "zone" may not even be aware of the equivalent American book, Herbert Muller's "The Uses of…

Seismic Propagation in the Kuriles/Kamchatka Region

DTIC Science & Technology

1980-07-25

model the final profile is well-represented by a spline interpolation. Figure 7 shows the sampling grid used to input velocity perturbations due to the...A modification of Cagniard’s method for s~ lving seismic pulse problems, Appl. Sci. Res. B., 8, p. 349, 1960. Fuchs, K. and G. Muller, Computation of

Toward Computational Modeling of C2 for Teams of Autonomous Systems and People

DTIC Science & Technology

2014-06-01

Muller, J. 9/26/2012. With Driverless Cars, Once Again It Is California Leading The Way. Forbes; http://www.forbes.com/sites/joannmuller/2012/09/26...with- driverless -cars-once-again-it-is-california- leading-the-way/; retrieved 09/19/2013. Nissen, M.E. 2007. Computational Experimentation on New

Computational Experimentation to Understand C2 for Teams of Autonomous Systems and People

DTIC Science & Technology

2014-12-12

Muller, J. 9/26/2012. With Driverless Cars, Once Again It Is California Leading The Way. Forbes; http://www.forbes.com/sites/joannmuller/2012/09...26/with- driverless -cars- once-again-it-is-california-leading-the-way/; retrieved 09/19/2013. Nissen, M.E. 2007. Computational Experimentation on New

Crosslinguistic Transfer in the Acquisition of Compound Words in Persian-English Bilinguals

ERIC Educational Resources Information Center

Foroodi-Nejad, Farzaneh; Paradis, Johanne

2009-01-01

Crosslinguistic transfer in bilingual language acquisition has been widely reported in various linguistic domains (e.g., Dopke, 1998; Nicoladis, 1999; Paradis, 2001). In this study we examined structural overlap (Dopke, 2000; Muller and Hulk, 2001) and dominance (Yip and Matthews, 2000) as explanatory factors for crosslinguistic transfer in…

Analysis of 4D Modeling for Use by the Naval Facilities Engineering Command

DTIC Science & Technology

2004-08-01

Use Today Today, 4D modeling is being used to build Space Mountain at the new Hong Kong Disneyland theme park. Additionally, the technology is being...used for the reconstruction of the 26-year-old Space Mountain at the Disneyland in Anaheim. Muller explains: Among the hassles: Contractors must

Reed-Muller Codes in Error Correction in Wireless Adhoc Networks

DTIC Science & Technology

2004-03-01

resulting spectrum is the spectrum of the windowed signal. Therefore, the window width is an important pa- rameter that affects the BER performanceof ... compare the results, the same random message was used. The seed value in msg.m was changed only for comparing the PAPR values of the system with

Emotional Arousal and Enhanced Amygdala Activity: New Evidence for the Old Perseveration-Consolidation Hypothesis

ERIC Educational Resources Information Center

McGaugh, James L.

2005-01-01

Just a little over a century has passed since Muller and Pilzecker (1900) proposed the "perseveration-consolidation" hypothesis suggesting that neural activity initiated by newly learned information perseverates for a while and that such perseveration is critical for consolidating memory. Although memory consolidation is currently the focus of…

Working with Parents and Family: Factors that Influence Chinese Teachers' Attitudes toward Parent Involvement

ERIC Educational Resources Information Center

Gu, Wei; Yawkey, Thomas D.

2010-01-01

Student achievement and teacher-parent collaboration are strongly correlated to teachers' attitudes toward involvement (Muller & Kerbow, 1993; Swap, 1993). However, there is very little research in China (Gu, 2006) on examining factors that are well documented to show impacts on teachers' attitudes toward parent involvement. This research…

Quantitation of Lipase Activity from a Bee: An Introductory Enzyme Experiment.

ERIC Educational Resources Information Center

Farley, Kathleen A.; Jones, Marjorie A.

1989-01-01

This four-hour experiment uses a bee as a source of the enzyme which is reacted with a radioactive substrate to determine the specific activity of the enzyme. Uses thin layer chromatography, visible spectrophotometry, and liquid scintillation spectrometry (if not available a Geiger-Muller counter can be substituted). (MVL)

Policy, Literacy, and Energy

ERIC Educational Resources Information Center

McCormack, Stacy

2015-01-01

In the fall of 2008, Stacy McCormack's students were caught up in the presidential election, and she began to wonder how she might harness this passion for politics in her high school physics classroom. At about the same time, a friend recommended the book "Physics for Future Presidents" (Muller 2008), which led her to develop a year…

Barriers, Springboards and Benchmarks: China Conceptualizes the Pacific Island Chains

DTIC Science & Technology

2016-03-04

the South China Sea during World War II, severing Japanese SLOCs and thus Japan’s sup- ply of oil and raw materials.”59 Chinese sources refer to Guam...Training for joint operations in an informatized battle- field), Renmin haijun, 7 April 2009. 65 Jiefangjun bao, 12 June 1980, 1, cited in Muller

Endoscopic endonasal anatomy of superior orbital fissure and orbital apex regions: critical considerations for clinical applications.

PubMed

Dallan, Iacopo; Castelnuovo, Paolo; de Notaris, Matteo; Sellari-Franceschini, Stefano; Lenzi, Riccardo; Turri-Zanoni, Mario; Battaglia, Paolo; Prats-Galino, Alberto

2013-05-01

The superior orbital fissure is a critical three-dimensional space connecting the middle cranial fossa and the orbit. From an endoscopic viewpoint, only the medial aspect has a clinical significance. It presents a critical relationship with the lateral sellar compartment, the pterygopalatine fossa and the middle cranial fossa. The connective tissue layers and neural and vascular structures of this region are described. The role of Muller's muscle is confirmed, and the utility of the maxillary and optic strut is outlined. Muller's muscle extends for the whole length of the inferior orbital fissure, passes over the maxillary strut and enters the superior orbital fissure, representing a critical surgical landmark. Dividing the tendon between the medial and inferior rectus muscle allows the identification of the main trunk of the oculomotor nerve, and a little laterally, it is usually possible to visualize the first part of the ophthalmic artery. Based on a better knowledge of anatomy, we trust that this area could be readily addressed in clinical situations requiring an extended approach in proximity of the orbital apex.

Description and phylogeny of a new microsporidium from the elm leaf beetle, Xanthogaleruca luteola Muller, 1766 (Coleoptera: Chrysomelidae).

PubMed

Bekircan, Çağrı; Bülbül, Ufuk; Güler, Halil I; Becnel, James J

2017-02-01

This study describes a new genus and species of microsporidia which is a pathogen of the elm leaf beetle, Xanthogaleruca luteola Muller, 1776 (Coleoptera: Chrysomelidae). The beetles were collected from Istanbul in Turkey. All developmental stages are uninucleate and in direct contact with the host cell cytoplasm. Giemsa-stained mature spores are oval in shape and measured 3.40 ± 0.37 μm in length and 1.63 ± 0.20 μm in width. These uninucleate spores have an isofilar polar filament with 11 turns. The spore wall was trilaminar (75 to 115 nm) with a rugose, electron-dense exospore (34 to 45 nm) and a thickened, electron-lucent endospore (65 to 80 nm) overlaying the plasmalemma. Morphological, ultrastructural, and molecular features indicate that the described microsporidium is dissimilar to all known microsporidian taxa and confirm that it has different taxonomic characters than other microsporidia infecting X. luteola and is named here as Rugispora istanbulensis n. gen., n. sp.

Rare beneficial mutations can halt Muller's ratchet

NASA Astrophysics Data System (ADS)

Balick, Daniel; Goyal, Sidhartha; Jerison, Elizabeth; Neher, Richard; Shraiman, Boris; Desai, Michael

2012-02-01

In viral, bacterial, and other asexual populations, the vast majority of non-neutral mutations are deleterious. This motivates the application of models without beneficial mutations. Here we show that the presence of surprisingly few compensatory mutations halts fitness decay in these models. Production of deleterious mutations is balanced by purifying selection, stabilizing the fitness distribution. However, stochastic vanishing of fitness classes can lead to slow fitness decay (i.e. Muller's ratchet). For weakly deleterious mutations, production overwhelms purification, rapidly decreasing population fitness. We show that when beneficial mutations are introduced, a stable steady state emerges in the form of a dynamic mutation-selection balance. We argue this state is generic for all mutation rates and population sizes, and is reached as an end state as genomes become saturated by either beneficial or deleterious mutations. Assuming all mutations have the same magnitude selective effect, we calculate the fraction of beneficial mutations necessary to maintain the dynamic balance. This may explain the unexpected maintenance of asexual genomes, as in mitochondria, in the presence of selection. This will affect in the statistics of genetic diversity in these populations.

Time Resolved Microscopy of Charge Trapping in Polycrystalline Pentacene

NASA Astrophysics Data System (ADS)

Jaquith, Michael; Muller, Erik; Marohn, John

2007-03-01

The microscopic mechanisms by which charges trap in organic electronic materials are poorly understood. Muller and Marohn recently showed that electric force microscopy (EFM) can be used to image trapped charge in working pentacene thin-film transistors [E. M. Muller et al., Adv. Mater. 17 1410 (2005)]. We have made a new discovery by imaging trapped charge in pentacene films with much larger grains. In contrast to the previous study in which charge was found to trap inhomogeneously throughout the transistor gap, we find microscopic evidence for a new trapping mechanism in which charges trap predominantly at the pentacene/metal interface in large-grained devices. We conclude that at least two charge trapping mechanisms are at play in polycrystalline pentacene. We have made localized measurements of the trap growth over time by performing pulsed-gate EFM experiments. Trap formation is not instantaneous, taking up to a second to complete. Furthermore, the charge-trapping rate depends strongly on gate voltage (or hole concentration). This kinetics data is consistent with the hypothesis that traps form by chemical reaction.

Scientific feuds, polemics, and ad hominem arguments in basic and special-interest genetics.

PubMed

Carlson, Elof Axel

Scientific disputes are commonly presented and settled in journal publications. Most are resolved by a weighing of evidence and new findings. In some cases the arguments are personal and in the form of ad hominem attacks on the personality or integrity of an author of a journal article. Many famous scientists (e.g., Galileo, Newton, and Hooke) used ad hominem arguments in responding to their critics. William Bateson, W.F.R. Weldon, William Castle, and H.J. Muller used ad hominem arguments in their publications until the end of World War I, when editorial policy of journals changed. Motivating some of the attacks are philosophic differences (such as holistic or reductionist approaches to science), ideological differences (such as Marxist or Capitalist outlooks), politics (such as Cold War depictions by East and West on fallout from nuclear testing), or conflicts of interest (which can be professional or financial such as the debates over nontraditional and orthodox medicine or over tobacco smoking and health). Most of the time, the disputes are motivated by honest disagreements over the interpretation of the data. A recent surge (2009-2016) of ad hominem attacks by Edward Calabrese has appeared disparaging H. J. Muller, E. B. Lewis, other twentieth-century contributors to radiation genetics, and the National Academy of Sciences. They address the mutational effects of low-dose radiation exposure. Calabrese's attacks have led to responses by geneticists in the field of mutagenesis, by agencies criticized by Calabrese, and by students and colleagues of those who have been accused of deception by Calabrese. This article reviews some of the history of ad hominem arguments in science and the background to the attacks by Calabrese. I argue that Calabrese's characterization of Muller and his supporters is unjust, misleading, and hurtful. I also propose some methods for dealing with or preventing ad hominem attacks in professional journals. Copyright © 2017. Published by Elsevier B.V.

Constructively Aligning the Curriculum of a "New Generation" Bachelor of Environments Degree from a Social Realism Perspective

ERIC Educational Resources Information Center

Onsman, Andrys

2015-01-01

This paper describes the process of constructively aligning a generalist undergraduate degree using a sociological structure of professional education. Drawing largely on the work of educational sociologists like Young, Winch and Muller, the process aimed to introduce the notion of recontextualization as the curriculum driver for the constructive…

"Double-Dosing" in Math in North Carolina Public Schools. REL 2016-140

ERIC Educational Resources Information Center

Henry, Gary T.; Barrett, Nathan; Marder, Camille

2016-01-01

Double-dosing in math expands the time for students to learn by having them enroll in two (or occasionally more) math courses during the regular school day. Although the practice can take different forms and be used at different grade levels (Chait, Muller, Goldware, & Housman, 2007; Nomi & Allensworth, 2009), most research on…

The Response...: Differing Faiths in a Faith-Based Program

ERIC Educational Resources Information Center

Feeney, Stephanie; Freeman, Nancy K.

2012-01-01

In the May 2011 issue of "Young Children," Rabbi Meir Muller--Focus on Ethics's first guest editor--presented a situation set in a faith-based program. This column analyzes the responses provided by early childhood educators in reflecting on how best to use the Code to help a teacher follow the most ethically defensible course of action when…

Linking the "Know-That" and "Know-How" Knowledge through Games: A Quest to Evolve the Future for Science and Engineering Education

ERIC Educational Resources Information Center

Vahed, A.; McKenna, S.; Singh, S.

2016-01-01

This paper responds to Muller's notions of "knowing-that" and "knowing how". The paper addresses how educational interventions that are designed in line with targeted discipline-specific subjects can enhance the balance between professional practice and disciplinary knowledge in professionally accredited programmes at…

Bringing Together Knowledge and Capabilities: A Case Study of Engineering Graduates

ERIC Educational Resources Information Center

Case, Jennifer M.; Marshall, Delia

2016-01-01

In contemporary times there is a renewed focus on the purposes of university education in science or engineering, especially in emerging economy contexts like South Africa where the massification of higher education is in its early stages. The contributions by Muller ("High Educ" 70(3):409-416, 2015) and Walker ("High Educ"…

75 FR 28853 - Quarterly Publication of Individuals, Who Have Chosen To Expatriate, as Required by Section 6039G

Federal Register 2010, 2011, 2012, 2013, 2014

2010-05-24

.... HECKNER MICHAEL JOHANNES HELLMAN LISA JANE HELLMAN-MERZBACHER JESSICA HENTSCH NIKOLAI HO EUNICE YUK LING... JENNIFER LADANYI HANS GEORG LAMPE ARNO LAUREYNS VEERLE A LEBECH LISA MARGARET LEE YOONBOK STEPHEN LEHMANN... JAMES JOHN MORANT JR PAUL MU DEJUN MULLER SIGRID SIMONS NEDOLUHA DAVID A NEDOLUHA PATRICIA E NEDOLUHA...

An Inexpensive Cosmic Ray Detector for the Classroom

ERIC Educational Resources Information Center

Goldader, Jeffrey D.; Choi, Seulah

2010-01-01

Finding ways to demonstrate--in a high school classroom--that subatomic particles from space produce other particles capable of reaching the Earth's surface is not a trivial task. In this paper, we describe a Geiger-Muller tube-based cosmic ray coincidence detector we produced at a total cost of less than $200, using two tubes purchased used…

Natural Sources of Radiation Exposure and the Teaching of Radioecology

ERIC Educational Resources Information Center

Anjos, R. M.; Veiga, R.; Carvalho, C.; Sanches, N.; Estellita, L.; Zanuto, P.; Queiroz, E.; Macario, K.

2008-01-01

We have developed an experimental activity that introduces concepts of the natural ionizing radiation and its interaction with our contemporary environment that can be used with students from secondary to college level. The experiment is based on the use of traditional and cheap portable Geiger-Muller detectors as survey meters for "in situ"…

A Review of the Latent and Manifest Benefits (LAMB) Scale

ERIC Educational Resources Information Center

Muller, Juanita; Waters, Lea

2012-01-01

The latent and manifest benefits (LAMB) scale (Muller, Creed, Waters & Machin, 2005) was designed to measure the latent and manifest benefits of employment and provide a single scale to test Jahoda's (1981) and Fryer's (1986) theories of unemployment. Since its publication in 2005 there have been 13 studies that have used the scale with 5692…

Grasping the Muller-Lyer Illusion: The Contributions of Vision for Perception in Action

ERIC Educational Resources Information Center

van Doorn, Hemke; van der Kamp, John; Savelsbergh, Geert J. P.

2007-01-01

The present study examines the contributions of vision for perception processes in action. To this end, the influence of allocentric information on different action components (i.e., the selection of an appropriate mode of action, the pre-planning and online control of movement kinematics) is assessed. Participants (n = 10) were presented with a…

What is Ecosystem Structure?

Treesearch

RANDALL W. MYSTER

2001-01-01

Ecosystems were originally defined as units of the earth’s surface, that is the whole system including the organisms and the physical factors that form the environment (Tansley, 1935). As the study of ecosystem ecology evolved, ecosystems came to be categorized by their function and structure (Odum, 1953) with an emphasis on integration and indirect interaction (Muller...

Using Different Conceptual Change Methods Embedded within 5E Model: A Sample Teaching of Endothermic-Exothermic Reactions

ERIC Educational Resources Information Center

Turk, Fatma; Calik, Muammer

2008-01-01

Since Widodo, Duit and Muller (2002) addressed that there is a gap between teacher's theoretical knowledge and their practical classroom constructivist behavior, we presented a sample teaching activity about Endothermic-Exothermic Reactions for teacher usage. Therein, the aim of this study is to design a 5E model to include students' alternative…

Finished Genome Sequence of Bacillus cereus Strain 03BB87, a Clinical Isolate with B. anthracis Virulence Genes

DOE PAGES

Johnson, Shannon L.; Minogue, Timothy D.; Teshima, Hazuki; ...

2015-01-15

Bacillus cereus strain 03BB87, a blood culture isolate, originated in a 56-year-old male muller operator with a fatal case of pneumonia in 2003. Here we present the finished genome sequence of that pathogen, including a 5.46-Mb chromosome and two plasmids (209 and 52 Kb, respectively).

Microenvironmental Regulation of Mammary Carcinogenesis

DTIC Science & Technology

2008-06-01

cells. These models share many of the hallmarks of multistage human breast cancer development including histological disease progression and immune cell... developed by Muller and colleagues20, represents a reasonable recapitulation of late-stage human breast cancer as determined by histological progression ...Annual Progress Report d. Develop a profile of proteolytic activities in normal and neoplastic mammary tissues from mouse models of mammary

Visual Illusions and the Control of Ball Placement in Goal-Directed Hitting

ERIC Educational Resources Information Center

Caljouw, Simone R.; Van der Kamp, John; Savelsbergh, Geert J. P.

2010-01-01

When hitting, kicking, or throwing balls at targets, online control in the target area is impossible. We assumed this lack of late corrections in the target area would induce an effect of a single-winged Muller-Lyer illusion on ball placement. After extensive practice in hitting balls to different landing locations, participants (N = 9) had to hit…

An Evaluation method for C2 Cyber-Physical Systems Reliability Based on Deep Learning

DTIC Science & Technology

2014-06-01

the reliability testing data of the system, we obtain the prior distribution of the relia- bility is 1 1( ) ( ; , )R LG R r  . By Bayes theo- rem ...criticality cyber-physical sys- tems[C]//Proc of ICDCS. Piscataway, NJ: IEEE, 2010:169-178. [17] Zimmer C, Bhat B, Muller F, et al. Time-based intrusion de

Role of the Visuomotor System in On-Line Attenuation of a Premovement Illusory Bias in Grip Aperture

ERIC Educational Resources Information Center

Heath, M.; Rival, C.

2005-01-01

In this investigation participants formulated a grip aperture (GA) consistent with the size of an object embedded within a Muller-Lyer (ML) figure prior to initiating visually guided grasping movements. The accuracy of the grasping response was emphasized to determine whether or not the visuomotor system might resolve the premovement bias in GA…

The Role of Language Dominance in Cross-Linguistic Syntactic Influence: A Korean Child's Use of Null Subjects in Attriting English

ERIC Educational Resources Information Center

Kang, Sang-Gu

2013-01-01

While Hulk and Muller (2000) predict that the direction of cross-linguistic syntactic influence is unidirectional when the construction involves syntax-pragmatics interface and surface overlap between two languages, they explicitly rule out language dominance as a factor involved. This study questions their latter claim and argues that the syntax…

Embryonic genetic load in coastal Douglas-fir, Pseudotsuga menziesii var. menziesii.

Treesearch

Frank C. Sorensen

1969-01-01

Genetic load has been estimated for a number of outcrossing organisms, for example, Drosophila (Malogolowkin-Cohen et al. 1964), Tribolium (Levene et al. 1965), and man (Morton, Crow, and Muller 1956). However, little informaiton about load of deleterious genes in higher plants has been published. The purpose of this article is to provide some data on plants by...

The Limits to Parapatric Speciation: Dobzhansky–Muller Incompatibilities in a Continent–Island Model

PubMed Central

Bank, Claudia; Bürger, Reinhard; Hermisson, Joachim

2012-01-01

How much gene flow is needed to inhibit speciation by the accumulation of Dobzhansky–Muller incompatibilities (DMIs) in a structured population? Here, we derive these limits in a classical migration–selection model with two haploid or diploid loci and unidirectional gene flow from a continent to an island. We discuss the dependence of the maximum gene-flow rate on ecological factors (exogeneous selection), genetic factors (epistasis, recombination), and the evolutionary history. Extensive analytical and numerical results show the following: (1) The maximum rate of gene flow is limited by exogeneous selection. In particular, maintenance of neutral DMIs is impossible with gene flow. (2) There are two distinct mechanisms that drive DMI evolution in parapatry, selection against immigrants in a heterogeneous environment and selection against hybrids due to the incompatibility. (3) Depending on the mechanism, opposite predictions result concerning the genetic architecture that maximizes the rate of gene flow a DMI can sustain. Selection against immigrants favors evolution of tightly linked DMIs of arbitrary strength, whereas selection against hybrids promotes the evolution of strong unlinked DMIs. In diploids, the fitness of the double heterozygotes is the decisive factor to predict the pattern of DMI stability. PMID:22542972

Spatially heterogeneous environmental selection strengthens evolution of reproductively isolated populations in a Dobzhansky-Muller system of hybrid incompatibility

Treesearch

Samuel A. Cushman; Erin L. Landguth

2016-01-01

Within-species hybrid incompatibility can arise when combinations of alleles at more than one locus have low fitness but where possession of one of those alleles has little or no fitness consequence for the carriers. Limited dispersal with small numbers of mate potentials alone can lead to the evolution of clusters of reproductively isolated genotypes despite...

Alejo Carpentier: Lo real y lo maravilloso en "El Reino de Este Mundo" (Alejo Carpentier: The Real and the Fantastic in "The Rule of the World")

ERIC Educational Resources Information Center

Rodriguez Monegal, Emir

1971-01-01

Special issue dedicated to studies on contemporary Spanish American literature. Paper read at the symposium on Alejo Carpentier organized by Klaus Muller-Bergh at Yale University, New Haven, Connecticut, under the auspices of the Antilles Research Program of the Council for Latin American Studies, on April 17, 1971. (DS)

The Principles of War Reconsidered

DTIC Science & Technology

2009-06-01

and technological innovation that affected all military capabilities” (Williamson Murray, “Armored Warfare,” W. Murray, A.R. Millet (Eds), Military...Richard M. Muller, “Close Air Support,” W. Murray, A.R. Millet (ed.), Military Innovation in the Interwar Period, Cambridge: University Press, 1996...dispersed battle-groups – making sharp ‘ finger -thrust’ … On the Russian Front the defensive 44 capacity of small mobile forces, distributed in battle

Balancing the Rates of New Bone Formation and Polymer Degradation Enhances Healing of Weight-Bearing Allograft/Polyurethane Composites in Rabbit Femoral Defects

DTIC Science & Technology

2014-10-03

frac tures? J Orthop Res 29, 33, 2011. Epub 2010/07/08. 2. Russell, T.A., and Leighton , R.K. Comparison of autogenous bone graft and endothermic...Boyd, S.K., Christiansen , B.A., Guldberg, R.E., Jepsen, K.J., and Muller, R. Guidelines for assessment of bone microstructure in rodents using micro

PAIRED-CITY STUDY TO DETERMINE THE CONTRIBUTION OF SOURCE WATER TYPE TO THE ENDEMIC LEVEL OF MICROBIAL DISEASE

EPA Science Inventory

Paired-City Study to Determine the Contribution of Source Water Type to the Endemic Level of Microbial Disease

F Frost PhD, T Kunde MPH, L Harter PhD, T Muller MS, GF Craun PE MPH, RL Calderon MPH PhD

ABSTRACT

Context: The effectiveness of current drinking...

The TANAMI Program

DTIC Science & Technology

2010-06-01

Sternwartstrasse 7, 96049 Bamberg, Germany 3 CRESST/ NASA Goddard Space Flight Center, Greenbelt, ~’iID 20771, USA 4 USRA, 10211 Wincopin Circle, Suite...program and present early results on the 75 sources currently being monitored. 1. Introduction Very Long Baseline Interferometry (VLBI) observations...wavelength studies (e.g., Abdo et al. 2010a, Chang et al. 2010) be - sides probing emission processes along AGN jets (e.g., Muller et al. 2010, Hungwe

The Death of the Dinosaurs: 27 Years Later (LBNL Summer Lecture Series)

ScienceCinema

Muller, Rich [Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States). Dept. of Physics

2017-12-15

Summer Lecture Series 2006: Rich Muller, a Berkeley Lab physicist, discusses Nobel laureate Luis Alvarez and colleagues' 1979 discovery that an asteroid impact killed the dinosaurs. He also discusses what scientists have learned in the subsequent 27 years. Alvarez's team detected unusual amounts of iridium in sedimentary layers. They attributed the excess iridium to an impact from a large asteroid. His talk was presented June 30, 2006.

Growth Studies of Probiotic Bacteria on Short Chain Glucomannan, a Potential Prebiotic Substrate

DTIC Science & Technology

2012-12-05

PROBIOTIC BACTERIA ON SHORT CHAIN GLUCOMANNAN, A POTENTIAL PREBIOTIC SUBSTRATE by Wayne S. Muller Steve Arcidiacono Adam Liebowitz Ken Racicot... PROBIOTIC BACTERIA ON SHORT CHAIN GLUCOMANNAN, A POTENTIAL PREBIOTIC SUBSTRATE 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER PE...commercial prebiotic substrates. All three substrates had similar degree of polymerization (DP) of 2-9. Five probiotic bacteria were evaluated for

Synaptic Plasticity and Memory Formation

DTIC Science & Technology

1990-12-05

aniracetam was found recently to enhance the conductance of AMPA receptors expressed in oocytes from rat brain mRNA without altering responses by NMDA and...laboratory using the two input paradigm indicates that aniracetam increases control responses by 25 ± 8% (n = 20) but potentiated inputs by only 14 ± 6... aniracetam has no effect on NMDA receptor mediated responses (Xiao et al., in oreo.). These latter experiments used the paradigm established by Muller

Distribution and Characterization of Antigens Found in Subcellular Fractions of African Trypanosomes.

DTIC Science & Technology

1979-08-01

flagellate, Tritrichomonas foetus . The specific activities for enzymes in the original homogenate, cumulative percentage distributions in the various...with another protozoan T. foetus (Lloyd, Lindmark and Muller in press). The lack of latency for this trypanosomal ATPase indicates the enzyme to occupy...flagellate protozoan Tritrichomonas foetus . J. Gen. Microbiol. (in press). . Lowry, 0. H., Rosebrough, N. D., Farr, A. L. and Randall, R. J. (1951) Protein 9

The Death of the Dinosaurs: 27 Years Later (LBNL Summer Lecture Series)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Muller, Rich

2006-06-30

Summer Lecture Series 2006: Rich Muller, a Berkeley Lab physicist, discusses Nobel laureate Luis Alvarez and colleagues' 1979 discovery that an asteroid impact killed the dinosaurs. He also discusses what scientists have learned in the subsequent 27 years. Alvarez's team detected unusual amounts of iridium in sedimentary layers. They attributed the excess iridium to an impact from a large asteroid. His talk was presented June 30, 2006.

Major Joint/Combined Operations

DTIC Science & Technology

2008-01-01

Quarterly 3 (Winter 1993–1994), 74. 20 Andrew G. B. Vallance , The Air Weapon: Doctrines of Air Power Strategy and Operational Art (New York: St... Vallance , 94; and Donald L. McSwain, Air Campaign Planning for Contingency Operations (Maxwell Air Force Base, AL: Air War College, May 1989), 37. 23...require positive identification of friendly forces and positive control of aircraft. 36 Richard R. Muller, “Close Air Support: The German, British

A simple, rapid and inexpensive screening method for the identification of Pythium insidiosum.

PubMed

Tondolo, Juliana Simoni Moraes; Loreto, Erico Silva; Denardi, Laura Bedin; Mario, Débora Alves Nunes; Alves, Sydney Hartz; Santurio, Janio Morais

2013-04-01

Growth of Pythium insidiosum mycelia around minocycline disks (30μg) did not occur within 7days of incubation at 35°C when the isolates were grown on Sabouraud, corn meal, Muller-Hinton or RPMI agar. This technique offers a simple and rapid method for the differentiation of P. insidiosum from true filamentous fungi. Copyright © 2013 Elsevier B.V. All rights reserved.

Structure-Property Relations in Aluminum-Lithium Alloys

DTIC Science & Technology

1989-01-01

adsorbed ( Mughrabi et al , 1983). Such dislocations could not re-enter the grain during the reverse cycle of stress and the associated slip would be...ASTM STP 601, ASTM, 33 Mughrabi , H., Wang, R., Differt, D., Essmann, U. (1983) ASTM STP 811, ASTM, 5 Muller, W. et al (1986) Aluminium-Lithium Alloys...behaviour of Al -Li-Cu-Mg-Zr alloys ...... 34 2.4 Mechanical behaviour ......................................... 35 2.4.1 Elastic modulus

Two Simple Approaches to Overcome a Problem with the Mantel-Haenszel Statistic: Comments on Wang, Bradlow, Wainer, and Muller (2008)

ERIC Educational Resources Information Center

Sinharay, Sandip; Dorans, Neil J.

2010-01-01

The Mantel-Haenszel (MH) procedure (Mantel and Haenszel) is a popular method for estimating and testing a common two-factor association parameter in a 2 x 2 x K table. Holland and Holland and Thayer described how to use the procedure to detect differential item functioning (DIF) for tests with dichotomously scored items. Wang, Bradlow, Wainer, and…

Magnetic Random Access Memory based non-volatile asynchronous Muller cell for ultra-low power autonomous applications

NASA Astrophysics Data System (ADS)

Di Pendina, G.; Zianbetov, E.; Beigne, E.

2015-05-01

Micro and nano electronic integrated circuit domain is today mainly driven by the advent of the Internet of Things for which the constraints are strong, especially in terms of power consumption and autonomy, not only during the computing phases but also during the standby or idle phases. In such ultra-low power applications, the circuit has to meet new constraints mainly linked to its changing energetic environment: long idle phases, automatic wake up, data back-up when the circuit is sporadically turned off, and ultra-low voltage power supply operation. Such circuits have to be completely autonomous regarding their unstable environment, while remaining in an optimum energetic configuration. Therefore, we propose in this paper the first MRAM-based non-volatile asynchronous Muller cell. This cell has been simulated and characterized in a very advanced 28 nm CMOS fully depleted silicon-on-insulator technology, presenting good power performance results due to an extremely efficient body biasing control together with ultra-wide supply voltage range from 160 mV up to 920 mV. The leakage current can be reduced to 154 pA thanks to reverse body biasing. We also propose an efficient standard CMOS bulk version of this cell in order to be compatible with different fabrication processes.

Transcorneal electrical stimulation rescues axotomized retinal ganglion cells by activating endogenous retinal IGF-1 system.

PubMed

Morimoto, Takeshi; Miyoshi, Tomomitsu; Matsuda, Satoshi; Tano, Yasuo; Fujikado, Takashi; Fukuda, Yutaka

2005-06-01

To investigate the effect of transcorneal electrical stimulation (TES) on the survival of axotomized RGCs and the mechanism underlying the TES-induced neuroprotection in vivo. Adult male Wistar rats received TES after optic nerve (ON) transection. Seven days after the ON transection, the density of the surviving RGCs was determined, to evaluate the neuroprotective effect of TES. The levels of the mRNA and protein of insulin-like growth factor (IGF)-1 in the retina after TES were determined by RT-PCR and Northern and Western blot analyses. The localization of IGF-1 protein in the retina was examined by immunohistochemistry. TES after ON transection increased the survival of axotomized RGCs in vivo, and the degree of rescue depended on the strength of the electric charge. RT-PCR and Northern and Western blot analyses revealed a gradual upregulation of intrinsic IGF-1 in the retina after TES. Immunohistochemical analysis showed that IGF-1 immunoreactivity was localized initially in the endfeet of Muller cells and then diffused into the inner retina. TES can rescue the axotomized RGCs by increasing the level of IGF-1 production by Muller cells. These findings provide a new therapeutic approach to prevent or delay the degeneration of retinal neurons without the administration of exogenous neurotrophic factors.

Unique Effects of Infectious or Inflammatory Stress on Fat Metabolism in Rats.

DTIC Science & Technology

1981-08-07

free fatty acids and glucose. Data such as these tend to demonstrate that although glucagon is ketogenic , its effect is rapidly overwhelmed and...containing diets during stress was the cause of the higher than normal insulin concentrations resulting in the inhibition of lipolysis and ketogenesis...other catabolic illnesses. Diabetes 20:834-883, 1972. 29. Muller WA, Faloona GR, Unger RH: The influence of antecedent diet upon glucagon and insulin

A Comparison of Monte Carlo Tree Search and Rolling Horizon Optimization for Large Scale Dynamic Resource Allocation Problems

DTIC Science & Technology

2015-05-01

decisions on the fly in an online retail environment. Tech. rep., Working Paper, Massachusetts Institute of Technology, Boston, MA. Arneson, Broderick , Ryan...Hayward, Philip Henderson. 2009. MoHex wins Hex tournament. International Computer Games Association Journal 32 114–116. Arneson, Broderick , Ryan B...Combina- torial Search. Enzenberger, Markus, Martin Muller, Broderick Arneson, Richard Segal. 2010. Fuego—an open-source framework for board games and

Cooperative Search with Autonomous Vehicles in a 3D Aquatic Testbed

DTIC Science & Technology

2012-01-01

Cooperative Search with Autonomous Vehicles in a 3D Aquatic Testbed Matthew Keeter1, Daniel Moore2,3, Ryan Muller2,3, Eric Nieters1, Jennifer...Many applications for autonomous vehicles involve three-dimensional domains, notably aerial and aquatic environments. Such applications include mon...TYPE 3. DATES COVERED 00-00-2012 to 00-00-2012 4. TITLE AND SUBTITLE Cooperative Search With Autonomous Vehicles In A 3D Aquatic Testbed 5a

Premilitary Trauma Symptomatolgy Among Female U.S. Navy Basic Trainees

DTIC Science & Technology

1996-12-01

of abuse and child abuse screening. Child Abuse & Neglect. 16. 647-659. Cohen, J. (1988). Statistical power analysis for the behavioral sciences...psychosocial adjustment: A review of the research. Child Abuse & Neglect. 9(2), 251-263. Malinosky-Rummell, R. R.. & Hansen, D. J. (1993). Long-term consequences...abusive behaviors. NHRC Report No. 95-26. San Diego, CA: Naval Health Research Center. Muller, R. T. (1991). Victim blame and child abuse . Unpublished

AFRRI (Armed Forces Radiobiology Research Institute) Reports, January-March 1985

DTIC Science & Technology

1985-01-01

monkey and human gastric functions Address osl i ,194 Arorlett: July~ (1, 1118. (6). .). and thle drug dosage was close to that ustid inAi~oattno...ionization chambers this requires the use of the two- * dosimeter method. One of the chambers is constructed of A-150 tissue- equivalent (TE) plastic, and...out excessively high flow rates. A photon energy-compensated Geiger- * Muller (GM) dosimeter is often used as the second dosimeter . However

The Limits of Moral Principle: An Ends, Means, and Role Spheres Model of the Ethical Threshold.

DTIC Science & Technology

1986-09-01

Stuart Mill (1806-1873) and Jeremy Bentham (1748-1832) are readily identified with utilitarianism , while Plato, Aris- totle, Immanual Kant (1724-1804), and...Pennsylvania: Chandler Publishing Company, 1970. 11. Mill , John Stewart. Utilitarianism . Edited by Oskar Piest. New York: Bobbs-Merrill, 1957. 12. Muller... John Locke (1632-1704) are identified with formalism (1:365). Utilitarian thought can be further broken down into such categories as act

First Annual FAA General Aviation Forecast Conference Proceedings

DTIC Science & Technology

1991-03-01

of Portland Wellington, KS 67152 P.O. Box 3529 (316) 326-5921 Portland, OR 97218 (503) 231-5000 Rick Patton Muller, Sirhall & Associates, Inc. John...360-4161 (818) 843-8311 John Trupchak Rick Weinberg Manager of Maintenance University of Illinois Xerox 1 Airport Rd. Hanger G- Westchester Airport...S.W. (214) 522-0851 Washington, DC 20591 (202) 267-3361 157 Robert Yancey BFGoodrich Aerospace & Defense Division P.O. Box 340 Troy, OH 45373 (513

8TH International Laser Physics Workshop Lphys󈨧 Budapest, July 2-6, 1999, Program

DTIC Science & Technology

1999-07-05

Gerhard J. MUller (Germany) Rudolf Steiner (Germany) Symposium Status and Future Directions of High-Power Laser Installations Co-Chairs: See Leang...Sciences, Kazan. Russia I.A. Shcherbakov General Physics Institute. Russian Academy of Sciences. Moscow, Russia R. Steiner Institute of Laser Technologies...14.50-15.15 R. Steiner , A. Pohl, A. Bentele, T. Meier (Ulm, Germany) Laser Doppler sensor for laser assisted injection 30 SEMINAR 5 --- LASER METHODS IN

Review of Cryogenic Mechanical and Thermal Properties of Al-Li Alloys and Alloy 2219

DTIC Science & Technology

1990-09-01

8217S-N (1D -8 0 0 a a ~ * * LJ * Sea 2.24.4148. FRACTURE TOUGHNESS, ksi-in1/ 2 . .t11lllll(l111ll11l11lll llllllJ lllll1ll0 Go 40 0 00 : A% ; c c c...using the Hill formula and static measurements of Noble 38 was noted by Muller et al., 4 2 but the explanation advanced, microplasticity , may not be

Prognostic Significance of Loss-of-Heterozygosity of the CUTL1 Putative Tumor Suppressor Gene in Breast Cancers

DTIC Science & Technology

2000-08-01

the mouse mammary tumor virus long terminal repeat (MMTV-LTR) frequently develop mammary tumors and uterine leiomyomas (4). The results of...coimmunoprecipitation analyses revealed that specific complexes of CDP/Cut and PyV LT antigen could be detected in both leiomyomas and mammary tumors (4...Martinsoudant, N., Nepveu, A., Cardiff, R. D., and Muller, W. J. The Induction Of Uterine Leiomyomas and Mammary Tumors In Transgenic Mice Expressing

Closed-Loop Resuscitation of Hemorrhagic Shock: Novel Solutions Infused to Hypotensive and Normotensive Endpoints

DTIC Science & Technology

2007-06-29

Anesthesia & Analgesia 98(4S):SCA 85, 2004. 5. Kramer GC, Brown TLH, Michell MW, Oliveira H, Herndon DN, Muller M, Baker RD: Enteral Resuscitation...Honolulu, Hawaii; Anesth Analg 98(4S):SCA 85, 2004. 10. Bruttig, SPGC, Kramer, GC: Clinical record of emergency vascular access using adult intraosseous ...supplement 1): abstracts 49, 2007. NATO Reports: 1. Bruttig SP, Kramer GC: Clinical record of emergency vascular access using adult intraosseous (10

Development of a Telemetry-Enabled High-G Projectile Carrier

DTIC Science & Technology

2012-09-01

of High Velocity Guns, Version 2 (IBHVG2) interior ballistics simulation • Pete Muller, ARL, helped populate the ARL sensor suite boards...differences in external characteristics between the conventional M831 and the modified M831 high-g carrier projectile can be seen in figure 3. Figure 2...of High Velocity Guns, Version 2 (IBHVG2) (6). The output values from the simulation for the selected charge weight are seen in table 2. Table 2

Job Oriented Training: Handleiding Serious Gaming (Job Oriented Training: Handleiding (Handbook) Serious Gaming)

DTIC Science & Technology

2008-09-01

bijvoorbeeld de toekomstige uitzendgebieden in zich heeft. De praktijk gaat hierbij vooraf aan de theorie , de benodigde theoretische kennis wordt niet vooraf...rapportnummer TNO-DV 2008 A340 Opdrachtnummer Datum September 2008 Auteur (s) dr. A.H. van der Hulst ir. T.J. Muller maj C.L. Roos Rubricering rapport...Oriented Training toegepast. Dit betekent in essentie dat de leerlingen vanaf dag een, integrale missies uitvoeren en niet eerst de theorie wordt

Semiconductor Millimeter Wavelength Electronics.

DTIC Science & Technology

1980-10-01

in whole or In part, Is permitted for any purpose of the U.S. Govenment. Contract N00014-79-C-040 N " H Contract Authority. NR SRO004 k Approved for...Muller) 2.2.1 Introduction ............................... 2-19 2.2.2 Assumptions ................................ 2-20 2.2.2.1 Wand N Treatment: List...Exact Approach ............ 2-28 2.2.3.1.2 Modified Wand N Approach ...... 2-32 2.2.3.2 The Impurity Redistribution Problem .. 2-33 2.2.3.2.1

Magnetic Random Access Memory based non-volatile asynchronous Muller cell for ultra-low power autonomous applications

DOE Office of Scientific and Technical Information (OSTI.GOV)

Di Pendina, G., E-mail: gregory.dipendina@cea.fr, E-mail: eldar.zianbetov@cea.fr, E-mail: edith.beigne@cea.fr; Zianbetov, E., E-mail: gregory.dipendina@cea.fr, E-mail: eldar.zianbetov@cea.fr, E-mail: edith.beigne@cea.fr; CNRS, SPINTEC, F-38000 Grenoble

2015-05-07

Micro and nano electronic integrated circuit domain is today mainly driven by the advent of the Internet of Things for which the constraints are strong, especially in terms of power consumption and autonomy, not only during the computing phases but also during the standby or idle phases. In such ultra-low power applications, the circuit has to meet new constraints mainly linked to its changing energetic environment: long idle phases, automatic wake up, data back-up when the circuit is sporadically turned off, and ultra-low voltage power supply operation. Such circuits have to be completely autonomous regarding their unstable environment, while remainingmore » in an optimum energetic configuration. Therefore, we propose in this paper the first MRAM-based non-volatile asynchronous Muller cell. This cell has been simulated and characterized in a very advanced 28 nm CMOS fully depleted silicon-on-insulator technology, presenting good power performance results due to an extremely efficient body biasing control together with ultra-wide supply voltage range from 160 mV up to 920 mV. The leakage current can be reduced to 154 pA thanks to reverse body biasing. We also propose an efficient standard CMOS bulk version of this cell in order to be compatible with different fabrication processes.« less

Error Correcting Codes and Related Designs

DTIC Science & Technology

1990-09-30

Theory, IT-37 (1991), 1222-1224. 6. Codes and designs, existence and uniqueness, Discrete Math ., to appear. 7. (with R. Brualdi and N. Cai), Orphan...structure of the first order Reed-Muller codes, Discrete Math ., to appear. 8. (with J. H. Conway and N.J.A. Sloane), The binary self-dual codes of length up...18, 1988. 4. "Codes and Designs," Mathematics Colloquium, Technion, Haifa, Israel, March 6, 1989. 5. "On the Covering Radius of Codes," Discrete Math . Group

A New Type of Carbon Nanostructure Formed Within a Metal-Matrix

DTIC Science & Technology

2012-06-01

A New Type of Carbon Nanostructure Formed Within a Metal-Matrix 1 Lourdes Salamanca-Riba, 1 Romaine Isaacs, 2 Azzam N. Mansour, 3 Adam Hall, 2...HAADF imaging. REFERENCES [1] D.A. Muller, Y. Tzou, R. Raj, and J . Silcox, Nature 366, 725 (1993). [2] R.R. Schlittler, J.W. Seo, J.K...Gimzewiski, C. Durkan, M.S.M. Saifullah, M.E. Welland, Science 292, 1136 (2001). [3] A.C. Ferrari, and J . Robertson, Phys. Rev. B 61, 14095 (2000). [4

Gliders of World War II: ’The Bastards No One Wanted’

DTIC Science & Technology

2008-06-01

BIBLIOGRAPHY Ammerman, Gale R . "An American Glider Pilot’s Story." Air Power History vol 46 no 1 (1999): 18-24. Barringer , Lewin Bennitt. Flight without...comments helped guide the research effort. Next, I would equally like to thank Dr. Richard R . Muller for encouraging me to consider the glider’s role...Field, November 1947), 2, as referenced in Janet R . Daly Bednarek, “American Combat Glider Program, 1941-1947: “Damned Fool Idea”,” Air Power

Modulation of Oxidative Stress by Gamma-Glutamylcysteine (GGC) and Conjugated Linoleic Acid (CLA) Isomer Mixture in Human Umbilical Vein Endothelial Cells

DTIC Science & Technology

2012-04-02

during cutaneous wound healing . Mediators Inflamm. 2010, 342328. Ringseis, R., Muller, A., Herter, C., Gahler, S., Steinhart, H., Eder, K., 2006. CLA...glutamylcysteine (GGC), a dipeptide and precursor of glutathione (GSH), and conjugated linoleic acid (CLA), a trans-fatty acid, exhibit antioxidant properties...synthesis in human endothelial cells. Changes in levels of 8-epi-PGF2a, thiobarbituric acid reac- tive substances (TBARS), GSH, total antioxidants , GSH

Current hypotheses for the evolution of sex and recombination.

PubMed

Hartfield, Matthew; Keightley, Peter D

2012-06-01

The evolution of sex is one of the most important and controversial problems in evolutionary biology. Although sex is almost universal in higher animals and plants, its inherent costs have made its maintenance difficult to explain. The most famous of these is the twofold cost of males, which can greatly reduce the fecundity of a sexual population, compared to a population of asexual females. Over the past century, multiple hypotheses, along with experimental evidence to support these, have been put forward to explain widespread costly sex. In this review, we outline some of the most prominent theories, along with the experimental and observational evidence supporting these. Historically, there have been 4 classes of theories: the ability of sex to fix multiple novel advantageous mutants (Fisher-Muller hypothesis); sex as a mechanism to stop the build-up of deleterious mutations in finite populations (Muller's ratchet); recombination creating novel genotypes that can resist infection by parasites (Red Queen hypothesis); and the ability of sex to purge bad genomes if deleterious mutations act synergistically (mutational deterministic hypothesis). Current theoretical and experimental evidence seems to favor the hypothesis that sex breaks down selection interference between new mutants, or it acts as a mechanism to shuffle genotypes in order to repel parasitic invasion. However, there is still a need to collect more data from natural populations and experimental studies, which can be used to test different hypotheses. © 2012 ISZS, Blackwell Publishing and IOZ/CAS.

Artificial insemination and eugenics: celibate motherhood, eutelegenesis and germinal choice.

PubMed

Richards, Martin

2008-06-01

This paper traces the history of artificial insemination by selected donors (AID) as a strategy for positive eugenic improvement. While medical artificial insemination has a longer history, its use as a eugenic strategy was first mooted in late nineteenth-century France. It was then developed as 'scientific motherhood' for war widows and those without partners by Marion Louisa Piddington in Australia following the Great War. By the 1930s AID was being more widely used clinically in Britain (and elsewhere) as a medical solution to male infertility for married couples. In 1935 English postal clerk, Herbert Brewer, promoted AID (eutelegenesis) as the socialization of the germ plasm in a eugenic scheme. The next year Hermann Muller, American Drosophila geneticist and eugenicist, presented his plan for human improvement by AID to Stalin. Some twenty years later, Muller, together with Robert Klark Graham, began planning a Foundation for Germinal Choice in California. This was finally opened in 1980 as the first practical experiment in eugenic AID, producing some 215 babies over the twenty years it functioned. While AID appeared to be a means of squaring a eugenic circle by separating paternity from love relationships, and so allowing eugenic improvement without inhibiting individual choice in marriage, it found very little favour with those who might use it, not least because of a couple's desire to have their 'own' children has always seemed stronger than any eugenic aspirations. No state has ever contemplated using AID as a social policy.

Assessment of HRSC Digital Terrain Models Produced for the South Polar Residual Cap

NASA Astrophysics Data System (ADS)

Putri, Alfiah Rizky Diana; Sidiropoulos, Panagiotis; Muller, Jan-Peter

2017-04-01

The current Digital Terrain Models available for Mars consist of NASA MOLA (Mars Orbital Laser Altimeter) Digital Terrain Models with an average resolution of 112 m/ pixel (512 pixels/degree) for the polar region. The ESA/DLR High Resolution Stereo Camera is currently orbiting Mars and mapping its surface, 98% with resolution of ≤100 m/pixel and better and 100% at lower resolution [1]. It is possible to produce Digital Terrain Models from HRSC images using various methods. In this study, the method developed on Kim and Muller [2] which uses the VICAR open source program together with photogrammetry sofrware from DLR (Deutschen Zentrums für Luft- und Raumfahrt) with image matching based on the GOTCHA (Gruen-Otto-Chau) algorithm [3]. Digital Terrain Models have been processed over the South Pole with emphasis on areas around South Polar Residual Cap from High Resolution Stereo Camera images [4]. Digital Terrain Models have been produced for 31 orbits out of 149 polar orbits available. This study analyses the quality of the DTMs including an assessment of accuracy of elevations using the MOLA MEGDR (Mission Experiment Gridded Data Records) which has roughly 42 million MOLA PEDR (Precision Experiment Data Records) points between latitudes of 78 o -90 o S. The issues encountered in the production of Digital Terrain Models will be described and the statistical results and assessment method will be presented. The resultant DTMs will be accessible via http://i-Mars.eu/web-GIS References: [1] Neukum, G. et. al, 2004. Mars Express: The Scientific Payload pp. 17-35. [2] Kim, J.-R. and J.-P. Muller. 2009. PSS vol. 57, pp. 2095-2112. [3] Shin, D. and J.-P. Muller. 2012. Pattern Recognition, 45(10), 3795 -3809. [4] Putri, A.R. D., et al., Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLI-B4, 463-469 Acknowledgements: The research leading to these results has received partial funding from the STFC "MSSL Consolidated Grant" ST/K000977/1 and partial support from the European Union's Seventh Framework Programme (FP7/2007-2013) under iMars grant agreement n ˚ 607379. The first author would like to acknowledge support for her studies from Indonesia Endowment Fund for Education (LPDP), Ministry of Finance, Republic of Indonesia. The authors would also like to thank Alexander Dumke (Freie Universitaet Berlin) for providing the EXTORI exterior orientation elements which were critical in the production of accuracy geolocations.

Sub-parsec Scale Imaging of Centaurus A

DTIC Science & Technology

2010-06-01

Sub-parsec scale imaging of Centaurus A Cornelia Muller" M. Kadler,,2,3, R.Ojha4,5, M. Bock’, C. M. Fromm7, E. Ros6,7, R. E. Rothschild8 and J. Wilms...California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0424, USA Abstract. At a distance of about 3.4 Mpc, the radio galaxy Centaurus A is... Centaurus A (PKS 1322-427) is the closest ac- tive radio galaxy at a distance of 3.42 ± 0.18Mpc (Ferrarese et a1. 2007), where an angular resolution

A new species of Parapharyngodon (Nematoda: Pharyngodonidae) infecting Dermatonotus muelleri (Anura: Microhylidae) from Caatinga, Northeastern Brazil.

PubMed

de Araujo Filho, João A; Brito, Samuel V; Almeida, Waltécio De O; Morais, Drausio H; Ávila, Robson W

2015-09-03

Parapharyngodon silvoi n. sp. (Nematoda: Pharyngodonidae) is described from the large and small intestine of the Muller's termite frog Dermatonotus muelleri (Boettger, 1885) from the biome Caatinga, Exu municipality, Pernambuco State, Brazil, Dermatonotus muelleri is a fossorial species with a specialized termite diet, and feeding and reproductive behavior occurring only during the wet season. The new species is distinguished from other species of the genus Parapharyngodon by showing ovary not coiled around the esophagus, morphology of anterior cloacal lip, spicule size and number of caudal papillae.

Improving the quantum cost of reversible Boolean functions using reorder algorithm

NASA Astrophysics Data System (ADS)

Ahmed, Taghreed; Younes, Ahmed; Elsayed, Ashraf

2018-05-01

This paper introduces a novel algorithm to synthesize a low-cost reversible circuits for any Boolean function with n inputs represented as a Positive Polarity Reed-Muller expansion. The proposed algorithm applies a predefined rules to reorder the terms in the function to minimize the multi-calculation of common parts of the Boolean function to decrease the quantum cost of the reversible circuit. The paper achieves a decrease in the quantum cost and/or the circuit length, on average, when compared with relevant work in the literature.

Dispersion and Attenuation Due to Scattering from Heterogeneities of the Frame Bulk Modulus of a Poroelastic Medium

DTIC Science & Technology

2010-02-19

attenuation is a function of the Hurst exponent which characterizes the fractal het- erogeneity. Muller and Gurevich15,16 used statistical smoothing of...modified Bessel function of the third kind, Γ denotes the gamma function, and ν is the Hurst coefficient which is assumed to be 0 < ν ≤ 1. The three...The Hurst coefficient, ν, is ν = 0.1 (long-dashed line), ν = 0.5 (short-dashed line), and ν = 0.9 (long-short dashed line). In (a) the sound speed

Role of Fatty Acid Binding Protein 5 (FABP5) in Breast Cancer Progression and Metastasis

DTIC Science & Technology

2013-04-01

invasiveness of S100A7 overexpressing ERa- and ERa? cells One of the hallmarks of tumor metastasis is its ability to degrade extracellular matrix to invade...increase in macrophages in doxycycline-inducedMMTV-mS100a7a15 compared with unin- duced mice (Fig. 2E). MMPs are known to degrade extracellular matrix (ECM...interplay with leptin and other adipocytokines. FEBS Lett 2009;583:259–65. 12. Ranger JJ, Levy DE, Shahalizadeh S, Hallett M, Muller WJ. Identifica- tion of

Advanced Photonic Hybrid Materials

DTIC Science & Technology

2015-07-01

intensities); this has been done in liquid, but this study attempted a stable solid-state glass . The transmission spectra showed well-defined plasmon...were functionalized with an original silicon polymer  for  compatibilization with  the  sol‐gel medium. The  glass  materials  showed well defined...doping  concentration, were  observed  in the  glasses , proving that no or very small LSPR coupling effects occured. Spectroscopic Muller Matrix

Prandtl-Meyer flow tables for parahydrogen at total temperatures from 30K to 290K and for nitrogen at total temperatures from 100K to 300K at total pressures from 1 ATM to 10 ATM

NASA Technical Reports Server (NTRS)

Haut, R. C.; Adcock, J. B.

1976-01-01

The dependency of Mach number on the Prandtl-Meyer function was numerically determined by iterating the Prandtl-Meyer function and applying the Muller method to converge on the Mach number for flows in cryogenic parahydrogen and nitrogen at various total pressures and total temperatures. The results are compared with the ideal diatomic gas values and are presented in tabular form.

The Role of Amplified Wild-Type Neu in the Etiology of Breast Cancer

DTIC Science & Technology

2002-07-01

T change of chromosome 5 (data not shown). DAPI banding patterns of nucleotide 2137) was present in clones derived from both identified the...erbB2 to rat chromosome band 10q32.1 Siegel, P.M., Dankort, D.L., Hardy, W.R., and Muller, W.J. (1994). Novelb y in situ h y b rid iza tio n . C y to g e...pregnancy stimulated neu mRNA expression in the TG female transgene in lines 6500 and 2477. Metaphase chromosomal 70 CANCER CELL : JULY 2002 complete

Searching for the Advantages of Virus Sex

NASA Astrophysics Data System (ADS)

Turner, Paul E.

2003-02-01

Sex (genetic exchange) is a nearly universal phenomenon in biological populations. But this is surprising given the costs associated with sex. For example, sex tends to break apart co-adapted genes, and sex causes a female to inefficiently contribute only half the genes to her offspring. Why then did sex evolve? One famous model poses that sex evolved to combat Muller's ratchet, the mutational load that accrues when harmful mutations drift to high frequencies in populations of small size. In contrast, the Fisher-Muller Hypothesis predicts that sex evolved to promote genetic variation that speeds adaptation in novel environments. Sexual mechanisms occur in viruses, which feature high rates of deleterious mutation and frequent exposure to novel or changing environments. Thus, confirmation of one or both hypotheses would shed light on the selective advantages of virus sex. Experimental evolution has been used to test these classic models in the RNA bacteriophage φ6, a virus that experiences sex via reassortment of its chromosomal segments. Empirical data suggest that sex might have originated in φ6 to assist in purging deleterious mutations from the genome. However, results do not support the idea that sex evolved because it provides beneficial variation in novel environments. Rather, experiments show that too much sex can be bad for φ6 promiscuity allows selfish viruses to evolve and spread their inferior genes to subsequent generations. Here I discuss various explanations for the evolution of segmentation in RNA viruses, and the added cost of sex when large numbers of viruses co-infect the same cell.

On complexity of trellis structure of linear block codes

NASA Technical Reports Server (NTRS)

Lin, Shu

1990-01-01

The trellis structure of linear block codes (LBCs) is discussed. The state and branch complexities of a trellis diagram (TD) for a LBC is investigated. The TD with the minimum number of states is said to be minimal. The branch complexity of a minimal TD for a LBC is expressed in terms of the dimensions of specific subcodes of the given code. Then upper and lower bounds are derived on the number of states of a minimal TD for a LBC, and it is shown that a cyclic (or shortened cyclic) code is the worst in terms of the state complexity among the LBCs of the same length and dimension. Furthermore, it is shown that the structural complexity of a minimal TD for a LBC depends on the order of its bit positions. This fact suggests that an appropriate permutation of the bit positions of a code may result in an equivalent code with a much simpler minimal TD. Boolean polynomial representation of codewords of a LBC is also considered. This representation helps in study of the trellis structure of the code. Boolean polynomial representation of a code is applied to construct its minimal TD. Particularly, the construction of minimal trellises for Reed-Muller codes and the extended and permuted binary primitive BCH codes which contain Reed-Muller as subcodes is emphasized. Finally, the structural complexity of minimal trellises for the extended and permuted, and double-error-correcting BCH codes is analyzed and presented. It is shown that these codes have relatively simple trellis structure and hence can be decoded with the Viterbi decoding algorithm.

The Pace of Hybrid Incompatibility Evolution in House Mice.

PubMed

Wang, Richard J; White, Michael A; Payseur, Bret A

2015-09-01

Hybrids between species are often sterile or inviable. This form of reproductive isolation is thought to evolve via the accumulation of mutations that interact to reduce fitness when combined in hybrids. Mathematical formulations of this "Dobzhansky-Muller model" predict an accelerating buildup of hybrid incompatibilities with divergence time (the "snowball effect"). Although the Dobzhansky-Muller model is widely accepted, the snowball effect has only been tested in two species groups. We evaluated evidence for the snowball effect in the evolution of hybrid male sterility among subspecies of house mice, a recently diverged group that shows partial reproductive isolation. We compared the history of subspecies divergence with patterns of quantitative trait loci (QTL) detected in F2 intercrosses between two pairs of subspecies (Mus musculus domesticus with M. m. musculus and M. m. domesticus with M. m. castaneus). We used a recently developed phylogenetic comparative method to statistically measure the fit of these data to the snowball prediction. To apply this method, QTL were partitioned as either shared or unshared in the two crosses. A heuristic partitioning based on the overlap of QTL confidence intervals produced unambiguous support for the snowball effect. An alternative approach combining data among crosses favored the snowball effect for the autosomes, but a linear accumulation of incompatibilities for the X chromosome. Reasoning that the X chromosome analyses are complicated by low mapping resolution, we conclude that hybrid male sterility loci have snowballed in house mice. Our study illustrates the power of comparative genetic mapping for understanding mechanisms of speciation. Copyright © 2015 by the Genetics Society of America.

The Pace of Hybrid Incompatibility Evolution in House Mice

PubMed Central

Wang, Richard J.; White, Michael A.; Payseur, Bret A.

2015-01-01

Hybrids between species are often sterile or inviable. This form of reproductive isolation is thought to evolve via the accumulation of mutations that interact to reduce fitness when combined in hybrids. Mathematical formulations of this “Dobzhansky–Muller model” predict an accelerating buildup of hybrid incompatibilities with divergence time (the “snowball effect”). Although the Dobzhansky–Muller model is widely accepted, the snowball effect has only been tested in two species groups. We evaluated evidence for the snowball effect in the evolution of hybrid male sterility among subspecies of house mice, a recently diverged group that shows partial reproductive isolation. We compared the history of subspecies divergence with patterns of quantitative trait loci (QTL) detected in F2 intercrosses between two pairs of subspecies (Mus musculus domesticus with M. m. musculus and M. m. domesticus with M. m. castaneus). We used a recently developed phylogenetic comparative method to statistically measure the fit of these data to the snowball prediction. To apply this method, QTL were partitioned as either shared or unshared in the two crosses. A heuristic partitioning based on the overlap of QTL confidence intervals produced unambiguous support for the snowball effect. An alternative approach combining data among crosses favored the snowball effect for the autosomes, but a linear accumulation of incompatibilities for the X chromosome. Reasoning that the X chromosome analyses are complicated by low mapping resolution, we conclude that hybrid male sterility loci have snowballed in house mice. Our study illustrates the power of comparative genetic mapping for understanding mechanisms of speciation. PMID:26199234

Cytogenetic mapping of the Muller F element genes in Drosophila willistoni group.

PubMed

Pita, Sebastián; Panzera, Yanina; Lúcia da Silva Valente, Vera; de Melo, Zilpa das Graças Silva; Garcia, Carolina; Garcia, Ana Cristina Lauer; Montes, Martín Alejandro; Rohde, Claudia

2014-10-01

Comparative genomics in Drosophila began in 1940, when Muller stated that the ancestral haploid karyotype of this genus is constituted by five acrocentric chromosomes and one dot chromosome, named A to F elements. In some species of the willistoni group such as Drosophila willistoni and D. insularis, the F element, instead of a dot chromosome, has been incorporated into the E element, forming chromosome III (E + F fusion). The aim of this study was to investigate the scope of the E + F fusion in the willistoni group, evaluating six other species. Fluorescent in situ hybridization was used to locate two genes of the F element previously studied-cubitus interruptus (ci) and eyeless (ey)-in species of the willistoni and bocainensis subgroups. Moreover, polytene chromosome photomaps corresponding to the F element (basal portion of chromosome III) were constructed for each species studied. In D. willistoni, D. paulistorum and D. equinoxialis, the ci gene was located in subSectction 78B and the ey gene in 78C. In D. tropicalis, ci was located in subSection 76B and ey in 76C. In species of the bocainensis subgroup, ci and ey were localized, respectively, at subsections 76B and 76C in D. nebulosa and D. capricorni, and 76A and 76C in D. fumipennis. Despite the differences in the subsection numbers, all species showed the same position for ci and ey. The results confirm the synteny of E + F fusion in willistoni and bocainensis subgroups, and allow estimating the occurrence of this event at 15 Mya, at least.

A glance into how the cold war and governmental loyalty investigations came to affect a leading U.S. radiation geneticist: Lewis J. Stadler's nightmare.

PubMed

Calabrese, Edward J

2017-10-30

This paper describes an episode in the life of the prominent plant radiation geneticist, Lewis J. Stadler (1897-1954) during which he became a target of the Federal Bureau of Investigation (FBI) concerning loyalty to the United States due to possible associations with the communist party. The research is based on considerable private correspondence of Dr. Stadler, the FBI interrogatory questions and Dr. Stadler's answers and letters of support for Dr. Stadler by leading scientists such as, Hermann J. Muller.

A history of the concept of the stimulus and the role it played in the neurosciences.

PubMed

Cassedy, Steven

2008-01-01

The term stimulus, as it was used in science from its earliest appearance in the sixteenth century up to the beginning of the nineteenth century, shows a gradual progress in denotation from the physical object designed to produce nervous and muscular excitation to the generically conceived event or object that initiates sensory or motor activity. To this shift corresponds a shift in the understanding of sensory experience. Johannes Muller's law of specific energy of sensory nerves played a major role in the shift, and Hermann von Helmholtz gave the shift its most thorough philosophical explanation.

Reconnaissance surficial geologic map of the Taylor Mountains quadrangle, southwestern Alaska

USGS Publications Warehouse

Wilson, Frederic H.

2015-09-28

I used the Platt and Muller 1950s-era aerial photographic interpretation map as the starting point for the surficial geology; their unpublished data were produced using a reconnaissance quality topographic base map. In addition to transferring their data to a modern base to use as a guide, all of the photographs were re-examined. As result, in a number of areas, the features have been reinterpreted and the linework revised. A major difference between the maps is the recognition of much more extensive glacially dammed lake deposits and reassignment of some glacial deposits to different glacial events.

A Biophysical-Computational Perspective of Breast Cancer Pathogenesis and Treatment Response

DTIC Science & Technology

2009-03-01

82. A.A. Rasmussen and K.J. Cullen, Breast Cancer Res Treat 47 (1998) 219- 33. 83. C. Kuperwasser, T. Chavarria, M. Wu, G. Magrane, J.W. Gray , L...24-34. 94. C.M. Lo, H.B. Wang, M. Dembo and Y.L. Wang, Biophys J 79 (2000) 144- 52. 95. D.S. Gray , J. Tien and C.S. Chen, J Biomed Mater Res A 66...Muller, G. Inghirami and F.G. Giancotti, Cell 126 (2006) 489-502. 103. C.C. Park, H. Zhang, M. Pallavicini, J.W. Gray , F. Baehner, C.J. Park and M.J

Bioconcentration and arsenic speciation analysis in ragworm, Hediste diversicolor (Muller 1776).

PubMed

Gaion, Andrea; Scuderi, Alice; Pellegrini, David; Sartori, Davide

2013-01-01

This study focused on bioconcentrations of arsenic in Hediste diversicolor (Müller 1776) after exposure to three different molecule solutions: arsenate, dimethyl-arsinate and arsenobetaine. Speciation analysis was carried out after exposing the organisms to these solutions in order to investigate their arsenic biotransformation capacity. Arsenic reached to the maximum level in these tissues after 15 days' exposure to a solution of 100 μg L(-1) of arsenobetaine, although a significant increase was obtained in worms exposed to arsenate. Speciation analysis shows that trimethyl-arsine oxide is the slowest detoxification phase recorded in experiment.

The Commercialization of the SiC Flame Sensor

NASA Astrophysics Data System (ADS)

Fedison, Jeffrey B.

2002-03-01

The technical and scientific steps required to produce large quantities of SiC flame sensors is described. The technical challenges required to understand, fabricate, test and package SiC photodiodes in 1990 were numerous since SiC device know how was embryonic. A sense of urgency for a timely replacement of the Geiger Muller gas discharge tube soon entered the scene. New dual fuel GE Power Systems gas turbines, which were designed to lean burn either natural gas or oil for low NOx emissions required a much higher sensitivity sensor. Joint work between GE CRD and Cree Research sponsored by the GE Aircraft Engine Division developed the know how for the fabrication of high sensitivity, high yield, reliable SiC photodiodes. Yield issues were uncovered and overcome. The urgency for system insertion required that SiC diode and sensor circuitry development needed to be carried out simultaneously with power plant field tests of laboratory or prototype sensor assemblies. The sensor and reliability specifications were stringent since the sensors installed on power plant turbine combustor walls are subjected to high levels of vibration, elevated temperatures, and high pressures. Furthermore a fast recovery time was required to sense flame out in spite of the fact that the amplifier circuit needed have high gain and high dynamic range. SiC diode technical difficulties were encountered and overcome. The science of hydrocarbon flames will also be described together with the fortunate overlap of the strong OH emission band with the SiC photodiode sensitivity versus wavelength characteristic. The extremely low dark current (<1pA/cm^2) afforded by the wide band gap and the 3eV sensitivity cutoff at 400nm made if possible to produce low amplifier offsets, high sensitivity and high dynamic range along with immunity to black body radiation from combustor walls. Field tests at power plants that had experienced turbine tripping, whenever oil fuel and/or oil with steam injection for power augmentation, were extremely encouraging. This warrantee problem previously due to the low sensitivity of the Geiger Muller tube was solved using the much higher sensitivity SiC detector. This sensitivity increase is partially due to the fact that the SiC photodiode “sees” the strong OH emission band whereas the Geiger Muller tube can only respond to the shorter wavelength CO emission band. Other successful field tests were observed and acclaimed by power plant operators, which for the first time could track mode switching and power level (flame intensity) because of the high dynamic range (>5000:1). The demand for this product thereupon rose dramatically. This success, the first for SiC devices other than that of SiC blue LEDs, is leading GE to implement this technology in other application fields.

Non-targeted glycosidic profiling of international wines using neutral loss-high resolution mass spectrometry.

PubMed

Barnaba, C; Dellacassa, E; Nicolini, G; Nardin, T; Serra, M; Larcher, R

2018-07-06

Many metabolites naturally occur as glycosides, since sugar moieties can be crucial for their biological activity and increase their water solubility. In the plant kingdom they may occur as glycosides or sugar esters, depending on precursor chemical structure, and in wine they have traditionally attracted attention due to their organoleptic properties, such as astringency and bitterness, and because they affect the colour and aroma of wines. A new approach directed at detailed description of glycosides in a large selection of monovarietal wines (8 samples each of Pinot Blanc, Muller Thurgau, Riesling, Traminer, Merlot, Pinot Noir and Cabernet Sauvignon) was developed by combining high performance liquid chromatography with high resolution tandem mass spectrometry. Analytical separation was performed on an Accucore™ Polar Premium LC column, while mass analysis was performed in negative ion mode with an non-targeted screening approach, using a Full MS/AIF/NL dd-MS 2 experiment at a resolving power of 140,000 FWHM. Over 280 glycoside-like compounds were detected, of which 133 (including low-molecular weight phenols, flavonoids and monoterpenols) were tentatively identified in the form of pentose (6), deoxyhexose (17), hexose (73), hexose-pentose (16), hexose-deoxyhexose (7), dihexose (5) and hexose ester (9) derivatives. It was not possible to univocally define the corresponding chemical structure for the remaining 149 glycosides. Non-parametric statistical analysis showed it was possible to well characterise the glycosylated profile of all red and Traminer wines, while the identified glycosides were almost entirely lacking in Pinot Blanc, Riesling and Muller Thurgau wines. Also Tukey's Honestly Significant Difference test (p < 0.05) and Principal Component Analysis confirmed that it was possible to almost entirely distinguish the selected red wines from each other according to their glycosylated profile. Copyright © 2018 Elsevier B.V. All rights reserved.

Evaluation of Accessory Lacrimal Gland in Muller's Muscle Conjunctival Resection Specimens for Precursor Cell Markers and Biological Markers of Dry Eye Disease.

PubMed

Ali, Marwan; Shah, Dhara; Pasha, Zeeshan; Jassim, Sarmad H; Jassim Jaboori, Assraa; Setabutr, Pete; Aakalu, Vinay K

2017-04-01

The accessory lacrimal glands (ALGs) are an understudied component of the tear functional unit, even though they are important in the development of dry eye syndrome (DES). To advance our understanding of aging changes, regenerative potential, and histologic correlates to human characteristics, we investigated human ALG tissue from surgical samples to determine the presence or absence of progenitor cell markers and lacrimal epithelial markers and to correlate marker expression to relevant patient characteristics. ALG tissues obtained from Muller's muscle conjunctival resection (MMCR) specimens were created using tissue microarrays (TMAs). Immunofluorescence staining of MMCR sections was performed using primary antibodies specific to cell protein markers. Cell marker localization in TMAs was then assessed by two blinded observers using a standardized scoring system. Patient characteristics including age, race, and status of ocular surface health were then compared against expression of stem cell markers. Human ALG expressed a number of epithelial markers, and in particular, histatin-1 was well correlated with the expression of epithelial markers and was present in most acini. In addition, we noted the presence of precursor cell markers nestin, ABCG2, and CD90 in ALG tissue. There was a decrease in precursor cell marker expression with increasing age. Finally, we noted that a negative association was present between histatin-1 expression and DES. Thus, we report for the first time that human ALG tissues contain precursor marker-positive cells and that this marker expression may decrease with increasing age. Moreover, histatin-1 expression may be decreased in DES. Future studies will be performed to use these cell markers to isolate and culture lacrimal epithelial cells from heterogeneous tissues, determine the relevance of histatin-1 expression to DES, and isolate candidate precursor cells from ALG tissue.

Lasing eigenvalue problems: the electromagnetic modelling of microlasers

NASA Astrophysics Data System (ADS)

Benson, Trevor; Nosich, Alexander; Smotrova, Elena; Balaban, Mikhail; Sewell, Phillip

2007-02-01

Comprehensive microcavity laser models should account for several physical mechanisms, e.g. carrier transport, heating and optical confinement, coupled by non-linear effects. Nevertheless, considerable useful information can still be obtained if all non-electromagnetic effects are neglected, often within an additional effective-index reduction to an equivalent 2D problem, and the optical modes viewed as solutions of Maxwell's equations. Integral equation (IE) formulations have many advantages over numerical techniques such as FDTD for the study of such microcavity laser problems. The most notable advantages of an IE approach are computational efficiency, the correct description of cavity boundaries without stair-step errors, and the direct solution of an eigenvalue problem rather than the spectral analysis of a transient signal. Boundary IE (BIE) formulations are more economic that volume IE (VIE) ones, because of their lower dimensionality, but they are only applicable to the constant cavity refractive index case. The Muller BIE, being free of 'defect' frequencies and having smooth or integrable kernels, provides a reliable tool for the modal analysis of microcavities. Whilst such an approach can readily identify complex-valued natural frequencies and Q-factors, the lasing condition is not addressed directly. We have thus suggested using a Muller BIE approach to solve a lasing eigenvalue problem (LEP), i.e. a linear eigenvalue solution in the form of two real-valued numbers (lasing wavelength and threshold information) when macroscopic gain is introduced into the cavity material within an active region. Such an approach yields clear insight into the lasing thresholds of individual cavities with uniform and non-uniform gain, cavities coupled as photonic molecules and cavities equipped with one or more quantum dots.

Recovery of Carbonate Ecosystems Following the End-Triassic Mass Extinction: Insights from Mercury Anomalies and Their Relationship to the Central Atlantic Magmatic Province

NASA Astrophysics Data System (ADS)

Corsetti, F. A.; Thibodeau, A. M.; Ritterbush, K. A.; West, A. J.; Yager, J. A.; Ibarra, Y.; Bottjer, D. J.; Berelson, W.; Bergquist, B. A.

2015-12-01

Recent high-resolution age dating demonstrates that the end-Triassic mass extinction overlapped with the eruption of the Central Atlantic Magmatic Province (CAMP), and the release of CO2 and other volatiles to the atmosphere has been implicated in the extinction. Given the potentially massive release of CO2, ocean acidification is commonly considered a factor in the extinction and the collapse of shallow marine carbonate ecosystems. However, the timing of global marine biotic recovery versus the CAMP eruptions is more uncertain. Here, we use Hg concentrations and Hg/TOC ratios as indicators of CAMP volcanism in continental shelf sediments, the primary archive of faunal data. In Triassic-Jurassic strata, Muller Canyon, Nevada, Hg and Hg/TOC levels are low prior to the extinction, rise sharply in the extinction interval, peak just prior to the appearance of the first Jurassic ammonite, and remain above background in association with a depauperate (low diversity) earliest Jurassic fauna. The return of Hg to pre-extinction levels is associated with a significant pelagic and benthic faunal recovery. We conclude that significant biotic recovery did not begin until CAMP eruptions ceased. Furthermore, the initial benthic recovery in the Muller Canyon section involves the expansion of a siliceous sponge-dominated ecosystem across shallow marine environments, a feature now known from other sections around the world (e.g., Peru, Morocco, Austria, etc.). Carbonate dominated benthic ecosystems (heralded by the return of abundant corals and other skeletal carbonates) did not recover for ~1 million years following the last eruption of CAMP, longer than the typical duration considered for ocean acidification events, implying other factors may have played a role in carbonate ecosystem dynamics after the extinction.

Blended Infant Massage-Parenting Enhancement Program on Recovering Substance-Abusing Mothers' Parenting Stress, Self-Esteem, Depression, Maternal Attachment, and Mother-Infant Interaction.

PubMed

Porter, Luz S; Porter, Brian O; McCoy, Virginia; Bango-Sanchez, Vivian; Kissel, Bonnie; Williams, Marjorie; Nunnewar, Sachin

2015-12-01

This study aimed to determine whether a blended Infant Massage-Parenting Enhancement Program (IMPEP) improved maternal psychosocial health outcomes (parenting stress, depressive symptoms, self-esteem, maternal attachment) and maternal-infant interaction among substance-addicted mothers (SAMs) actively engaged in outpatient rehabilitation. Designed as a randomized, three-group controlled trial testing two levels of psychoeducational intervention (IMPEP vs. PEP) and a control group (standard care parenting resources), the study was conducted in two substance abuse centers in southeast Florida on a convenience sample of 138 recovering SAM-infant pairs. IMPEP or PEP classes were held weekly on Weeks 2-5, with data collected at baseline (Week 1), Week 6, and Week 12 via structured interviews, observation (Observation Checklist on Maternal-Infant Interaction), and self-administered questionnaires (Abidin Parenting Stress Index, Beck Depression Inventory, Rosenberg Self-Esteem Scale, Muller's Maternal Attachment Inventory), analyzed descriptively and inferentially using Kruskall-Wallis analysis of variance and post hoc Wilcoxon rank sum and Mann-Whitney U tests. Both IMPEP and PEP groups had significantly increased Parenting Stress Index scores (decreased parenting stress) and decreased Beck Depression Inventory scores (decreased depressive symptoms) compared to controls at Week 12, whereas there were no clinically meaningful differences among study groups in Rosenberg Self-Esteem Scale, Muller's Maternal Attachment Inventory, or Observation Checklist on Maternal-Infant Interaction scores. Only the IMPEP group showed significant improvements in both psychological and physical (waist-hip ratio) measures of parenting stress over time. The findings suggest that infant massage blended into a structured parenting program has value-added effects in decreasing parenting stress and maternal depressive symptoms, but not on SAM's self-esteem, attachment, or maternal-infant interaction. Copyright © 2015. Published by Elsevier B.V.

Retrotransposons Are the Major Contributors to the Expansion of the Drosophila ananassae Muller F Element

PubMed Central

Shaffer, Christopher D.; Chen, Elizabeth J.; Quisenberry, Thomas J.; Ko, Kevin; Braverman, John M.; Giarla, Thomas C.; Mortimer, Nathan T.; Reed, Laura K.; Smith, Sheryl T.; Robic, Srebrenka; McCartha, Shannon R.; Perry, Danielle R.; Prescod, Lindsay M.; Sheppard, Zenyth A.; Saville, Ken J.; McClish, Allison; Morlock, Emily A.; Sochor, Victoria R.; Stanton, Brittney; Veysey-White, Isaac C.; Revie, Dennis; Jimenez, Luis A.; Palomino, Jennifer J.; Patao, Melissa D.; Patao, Shane M.; Himelblau, Edward T.; Campbell, Jaclyn D.; Hertz, Alexandra L.; McEvilly, Maddison F.; Wagner, Allison R.; Youngblom, James; Bedi, Baljit; Bettincourt, Jeffery; Duso, Erin; Her, Maiye; Hilton, William; House, Samantha; Karimi, Masud; Kumimoto, Kevin; Lee, Rebekah; Lopez, Darryl; Odisho, George; Prasad, Ricky; Robbins, Holly Lyn; Sandhu, Tanveer; Selfridge, Tracy; Tsukashima, Kara; Yosif, Hani; Kokan, Nighat P.; Britt, Latia; Zoellner, Alycia; Spana, Eric P.; Chlebina, Ben T.; Chong, Insun; Friedman, Harrison; Mammo, Danny A.; Ng, Chun L.; Nikam, Vinayak S.; Schwartz, Nicholas U.; Xu, Thomas Q.; Burg, Martin G.; Batten, Spencer M.; Corbeill, Lindsay M.; Enoch, Erica; Ensign, Jesse J.; Franks, Mary E.; Haiker, Breanna; Ingles, Judith A.; Kirkland, Lyndsay D.; Lorenz-Guertin, Joshua M.; Matthews, Jordan; Mittig, Cody M.; Monsma, Nicholaus; Olson, Katherine J.; Perez-Aragon, Guillermo; Ramic, Alen; Ramirez, Jordan R.; Scheiber, Christopher; Schneider, Patrick A.; Schultz, Devon E.; Simon, Matthew; Spencer, Eric; Wernette, Adam C.; Wykle, Maxine E.; Zavala-Arellano, Elizabeth; McDonald, Mitchell J.; Ostby, Kristine; Wendland, Peter; DiAngelo, Justin R.; Ceasrine, Alexis M.; Cox, Amanda H.; Docherty, James E.B.; Gingras, Robert M.; Grieb, Stephanie M.; Pavia, Michael J.; Personius, Casey L.; Polak, Grzegorz L.; Beach, Dale L.; Cerritos, Heaven L.; Horansky, Edward A.; Sharif, Karim A.; Moran, Ryan; Parrish, Susan; Bickford, Kirsten; Bland, Jennifer; Broussard, Juliana; Campbell, Kerry; Deibel, Katelynn E.; Forka, Richard; Lemke, Monika C.; Nelson, Marlee B.; O'Keeffe, Catherine; Ramey, S. Mariel; Schmidt, Luke; Villegas, Paola; Jones, Christopher J.; Christ, Stephanie L.; Mamari, Sami; Rinaldi, Adam S.; Stity, Ghazal; Hark, Amy T.; Scheuerman, Mark; Silver Key, S. Catherine; McRae, Briana D.; Haberman, Adam S.; Asinof, Sam; Carrington, Harriette; Drumm, Kelly; Embry, Terrance; McGuire, Richard; Miller-Foreman, Drew; Rosen, Stella; Safa, Nadia; Schultz, Darrin; Segal, Matt; Shevin, Yakov; Svoronos, Petros; Vuong, Tam; Skuse, Gary; Paetkau, Don W.; Bridgman, Rachael K.; Brown, Charlotte M.; Carroll, Alicia R.; Gifford, Francesca M.; Gillespie, Julie Beth; Herman, Susan E.; Holtcamp, Krystal L.; Host, Misha A.; Hussey, Gabrielle; Kramer, Danielle M.; Lawrence, Joan Q.; Martin, Madeline M.; Niemiec, Ellen N.; O'Reilly, Ashleigh P.; Pahl, Olivia A.; Quintana, Guadalupe; Rettie, Elizabeth A.S.; Richardson, Torie L.; Rodriguez, Arianne E.; Rodriguez, Mona O.; Schiraldi, Laura; Smith, Joanna J.; Sugrue, Kelsey F.; Suriano, Lindsey J.; Takach, Kaitlyn E.; Vasquez, Arielle M.; Velez, Ximena; Villafuerte, Elizabeth J.; Vives, Laura T.; Zellmer, Victoria R.; Hauke, Jeanette; Hauser, Charles R.; Barker, Karolyn; Cannon, Laurie; Parsamian, Perouza; Parsons, Samantha; Wichman, Zachariah; Bazinet, Christopher W.; Johnson, Diana E.; Bangura, Abubakarr; Black, Jordan A.; Chevee, Victoria; Einsteen, Sarah A.; Hilton, Sarah K.; Kollmer, Max; Nadendla, Rahul; Stamm, Joyce; Fafara-Thompson, Antoinette E.; Gygi, Amber M.; Ogawa, Emmy E.; Van Camp, Matt; Kocsisova, Zuzana; Leatherman, Judith L.; Modahl, Cassie M.; Rubin, Michael R.; Apiz-Saab, Susana S.; Arias-Mejias, Suzette M.; Carrion-Ortiz, Carlos F.; Claudio-Vazquez, Patricia N.; Espada-Green, Debbie M.; Feliciano-Camacho, Marium; Gonzalez-Bonilla, Karina M.; Taboas-Arroyo, Mariela; Vargas-Franco, Dorianmarie; Montañez-Gonzalez, Raquel; Perez-Otero, Joseph; Rivera-Burgos, Myrielis; Rivera-Rosario, Francisco J.; Eisler, Heather L.; Alexander, Jackie; Begley, Samatha K.; Gabbard, Deana; Allen, Robert J.; Aung, Wint Yan; Barshop, William D.; Boozalis, Amanda; Chu, Vanessa P.; Davis, Jeremy S.; Duggal, Ryan N.; Franklin, Robert; Gavinski, Katherine; Gebreyesus, Heran; Gong, Henry Z.; Greenstein, Rachel A.; Guo, Averill D.; Hanson, Casey; Homa, Kaitlin E.; Hsu, Simon C.; Huang, Yi; Huo, Lucy; Jacobs, Sarah; Jia, Sasha; Jung, Kyle L.; Wai-Chee Kong, Sarah; Kroll, Matthew R.; Lee, Brandon M.; Lee, Paul F.; Levine, Kevin M.; Li, Amy S.; Liu, Chengyu; Liu, Max Mian; Lousararian, Adam P.; Lowery, Peter B.; Mallya, Allyson P.; Marcus, Joseph E.; Ng, Patrick C.; Nguyen, Hien P.; Patel, Ruchik; Precht, Hashini; Rastogi, Suchita; Sarezky, Jonathan M.; Schefkind, Adam; Schultz, Michael B.; Shen, Delia; Skorupa, Tara; Spies, Nicholas C.; Stancu, Gabriel; Vivian Tsang, Hiu Man; Turski, Alice L.; Venkat, Rohit; Waldman, Leah E.; Wang, Kaidi; Wang, Tracy; Wei, Jeffrey W.; Wu, Dennis Y.; Xiong, David D.; Yu, Jack; Zhou, Karen; McNeil, Gerard P.; Fernandez, Robert W.; Menzies, Patrick Gomez; Gu, Tingting; Buhler, Jeremy; Mardis, Elaine R.; Elgin, Sarah C.R.

2017-01-01

The discordance between genome size and the complexity of eukaryotes can partly be attributed to differences in repeat density. The Muller F element (∼5.2 Mb) is the smallest chromosome in Drosophila melanogaster, but it is substantially larger (>18.7 Mb) in D. ananassae. To identify the major contributors to the expansion of the F element and to assess their impact, we improved the genome sequence and annotated the genes in a 1.4-Mb region of the D. ananassae F element, and a 1.7-Mb region from the D element for comparison. We find that transposons (particularly LTR and LINE retrotransposons) are major contributors to this expansion (78.6%), while Wolbachia sequences integrated into the D. ananassae genome are minor contributors (0.02%). Both D. melanogaster and D. ananassae F-element genes exhibit distinct characteristics compared to D-element genes (e.g., larger coding spans, larger introns, more coding exons, and lower codon bias), but these differences are exaggerated in D. ananassae. Compared to D. melanogaster, the codon bias observed in D. ananassae F-element genes can primarily be attributed to mutational biases instead of selection. The 5′ ends of F-element genes in both species are enriched in dimethylation of lysine 4 on histone 3 (H3K4me2), while the coding spans are enriched in H3K9me2. Despite differences in repeat density and gene characteristics, D. ananassae F-element genes show a similar range of expression levels compared to genes in euchromatic domains. This study improves our understanding of how transposons can affect genome size and how genes can function within highly repetitive domains. PMID:28667019

The 1980-81 AFOSR-HTTM (Heat Transfer and Turbulence Mechanics)-Stanford Conference on Complex Turbulent Flows: Comparison of Computation and Experiment. Volume 1. Objectives, Evaluation of Data, Specifications of Test Cases, Discussion, and Position Papers

DTIC Science & Technology

1980-09-01

GRHI78 de Grande and Hirsch (1978) JOHN70 Johnston (1970) LAL071 Larsson (1974) 0254 LOHM73 Lohmann (1973) MUKR79 M6ller and Krause (1979) PIDU74 Pierce...motion," Dissertation, University of Connecticut. MUller, U., and E. Krause (1979). "Measurements of mean velocities and Reynolds stresses in an...Chairman Dr. P. J. Roache 4925 Kathryn Circle S.E. Eval. Comm.; Albuquerque, NM 87108 Compt’..or A.63 Dr. Wolfgang Rodi Sonderforschungsbereich 80 Data Eval

Proceedings of Hawaiian Winter Workshop (6th) on Dynamics of Oceanic Internal Gravity Waves Held in Manoa, Hawaii on 15-18 January 1991

DTIC Science & Technology

1991-11-01

Gravity Waves 12. PERSONAL AUTHOR(S) MUller, Peter and Henderson, Diane (eds.) 13a. TYPE OF REPORT 13b TIME COVERED 14. DATE OF REPORT (Year, Month, Day) 15...differ by 27r in defining the buoyancy scale.) Because the largest overturns must be several times larger than Dillon’s rms scale, LB is a good upper...0.6 times GM76 at 0.01 cpm. From there, they slope upward as k+ 0.0 7 and k+0 16. The shallow spectrum makes a sharp transition at the rolloff and

The Bacillus subtilis Acyl Lipid Desaturase Is a Δ5 Desaturase

PubMed Central

Altabe, Silvia G.; Aguilar, Pablo; Caballero, Gerardo M.; de Mendoza, Diego

2003-01-01

Bacillus subtilis was recently reported to synthesize unsaturated fatty acids (UFAs) with a double bond at positions Δ5, Δ7, and Δ9 (M. H. Weber, W. Klein, L. Muller, U. M. Niess, and M. A. Marahiel, Mol. Microbiol. 39:1321-1329, 2001). Since this finding would have considerable importance in the double-bond positional specificity displayed by the B. subtilis acyl lipid desaturase, we have attempted to confirm this observation. We report that the double bond of UFAs synthesized by B. subtilis is located exclusively at the Δ5 position, regardless of the growth temperature and the length chain of the fatty acids. PMID:12730185

Signal Conditioning for Satellite Borne Energetic-Charged-Particle Experiments

NASA Technical Reports Server (NTRS)

Ludwig, George H.

1961-01-01

Many of the spacecraft launched thus far have carried detectors for investigating cosmic rays, solar protons, solar plasmas, and the geomagnetically trapped radiation. These detectors, which will find continued application in the future, include ion chambers; proportional, Geiger-Muller, scintillation, Cerenkov, and solid state detectors; ion collectors; and nuclear emulsions. The instrumentation required to condition the signals from these detectors prior to telemetering is steadily growing more complex in order to permit more meaningful measurements. This report describes a number of instrumentation elements typical of the present state of the art, and a present-generation three-detector system which illustrates the integration of such basic elements into a complex system.

GEIGER-MULLER TYPE COUNTER TUBE

DOEpatents

Fowler, I.L.; Watt, L.A.K.

1959-12-15

A single counter tube capable of responding to a wide range of intensities is described. The counter tube comprises a tubular cathode and an anode extending centrally of the cathode. The spacing between the outer surface of the anode and the inner surface of the cathode is varied along the length of the tube to provide different counting volumes in adjacent portions of the tube. A large counting volume in one portion adjacent to a low-energy absorption window gives adequate sensitivity for measuring lowintensity radiation, while a smaller volume with close electrode spacing is provided in the counter to make possible measurement of intense garnma radiation fields.

The validation and analysis of novel stereo-derived smoke plume products from AATSR and their application to fire events from the 2008 Russian fire season

NASA Astrophysics Data System (ADS)

Fisher, D.; Muller, J.-P.; Yershov, V.

2012-04-01

Biomass burning events in Boreal forests generate significant amounts of important greenhouse gases; including CO2, CO, NOx [1,2]. When the injection height is above the boundary layer (BL), the lifespan of these chemicals is greatly extended, as is their spatial distribution [2]. Typically, in chemical transport models (CTMs), BL injection heights are simplified and assumed to be constant. This is in part due to poor data availability. This leads to a reduction in the accuracy of the distribution outputs from such models. To generate better smoke-plume injection height (SPIH) inputs into CTMs, measurements need to be made of smoke plume heights, which can be used as a proxy for aerosol injection height into the atmosphere. One method of measuring SPIH is through stereo-photogrammetry [5], originally applied to optically thick clouds [3,4]. Here, we present validation and analysis of the M6 stereo matching method [5] for the determination of SPIHs applied to AATSR. It is referred to as M6 due to a shared heritage with the other M-series matchers [3,4]. M6 utilizes novel normalization and matching techniques to generate improved results, in terms of coverage and accuracy, over these afore-referenced matchers of similar type. Validation is carried out against independent, coincident and higher resolution SPIH measurements obtained from both the CALIOP instrument carried onboard the NASA-CNES CALIPSO satellite and also against measurements from the MISR Smoke Plume Product obtained by manual measurements using the MINX system (http://www.openchannelsoftware.com/projects/MINX) with the MISR instrument onboard the NASA satellite Terra. The results of this inter-comparison show an excellent agreement between AATSR and the CALIOP and MISR measurements. Further an inter-comparison between a heritage M-series matcher, M4 [3], also against MISR data demonstrates the significant improvement in SPIH generated by M6. [1] Crutzen, P. J., L. E. Heidt, et al. (1979). "Biomass Burning as a Source of Atmospheric Gases Co, H-2, N2o, No, Ch3cl and Cos." Nature 282(5736): 253-256. [2] Martin, M. V., J. A. Logan, et al. (2010). "Smoke injection heights from fires in North America: analysis of 5 years of satellite observations." Atmospheric Chemistry and Physics 10(4): 1491-1510. [3] Muller, J. P., M. A. Denis, et al. (2007). "Stereo cloud-top heights and cloud fraction retrieval from ATSR-2." International Journal of Remote Sensing 28(9): 1921-1938. [4] Muller, J.-P., A. Mandanyake, et al. (2002). "MISR stereoscopic image matchers: Techniques and results." IEEE Transactions on Geoscience and Remote Sensing 40: 1547-1559. [5] Fisher, D.N., Muller, J.-P., Yershov, V.N. (2012) "Automated Smoke Plume Injection Heights (SPIH) and Smoke-Plume Masks (SPM) from AATSR stereo for mapping aerosol and trace gas injection into the free troposphere", Remote Sensing of Environment (in review)

Radioactive phosphorus uptake test for the diagnosis of malignant melanoma of the choroid

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shields, J.A.; Packer, S.

The most frequently used radioisotope in ophthalmology is radioactive phosphorus (/sup 32/P). Since its introduction into ophthalmology in 1951, it has been used primarily as an aid in the diagnosis of malignant melanoma of the choroid. During the thirty years of clinical use, the indications for this test have been clearly defined. The maximum tissue penetration of /sup 32/P is 7 mm. Surgical dissection is therefore frequently necessary to enable the ophthalmologist to place the Geiger-Muller probe on the sclera in proximity to the tumor. False positive and false negative results are unusual and the test is between 96% andmore » 100% accurate.« less

A new species of Rhopalosiphum (Hemiptera, Aphididae) on Chusquea tomentosa (Poaceae, Bambusoideae) from Costa Rica

PubMed Central

Hidalgo, Nicolás Pérez; Martínez-Torres, David; Collantes-Alegre, Jorge Mariano; Muller, William Villalobos; Nafría, Juan M. Nieto

2012-01-01

Abstract The new species Rhopalosiphum chusqueae Pérez Hidalgo & Villalobos Muller, is described from apterous viviparous females caught on Chusquea tomentosa in Cerro de la Muerte (Costa Rica). The identity of the species is supported both by the morphological features and by a molecular phylogenetic analysis based on a fragment of the mitochondrial DNA containing the 5’ region of the cytochrome c oxidase 1 (COI) and on the nuclear gene coding for the Elongation factor-1 alpha (EF1α). The taxonomic position of the new species is discussed. An identification key to the Aphidinae species living on plants of Bambusoideae (Poaceae) is presented. PMID:22328859

High Tc: The Discovery of RBCO

NASA Astrophysics Data System (ADS)

Chu, C. W.

2007-03-01

It was said by Emerson that ``there is no history; there is only biography.'' This is especially true when the events are recounted by a person who, himself, has been heavily involved and the line between history and autobiography can become blurred. However, it is reasonable to say that discovery itself is not a series of accidents but an inevitable product of each development stage of scientific knowledge as was also pointed out by Holden et al. (1) The discovery of RBCO (2,3) with R = Y, La, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu is no exception. In this presentation, I will briefly recount several events that were crucial to the discovery of RBCO: those before 1986 (4) that sowed the seeds in our group important to our later high temperature superconductivity effort; those in 1986 (5) that were critical to our discovery of the 93 K RBCO soon after the discovery of the 35 K high temperature superconductor by M"uller and Bednorz (6); and those in 1987 when the barrier of the liquid nitrogen boiling temperature of 77 K was finally conquered. 1. G. J. Holton et al., American Scientist 84, 364 (1996). 2. M. K. Wu et al., Phys. Rev. Lett. 58, 908 (1987). 3. P. H. Hor et al., Phys. Rev. Lett. 58, 1891 (1987). 4. C. W. Chu et al., S. S. Comm. 18, 977 (1976); C. W. Chu and V. Diatchenko, Phys. Rev. Lett. 41, 572 (1978); T. H. Lin et al., Phys. Rev. B(RC) 29, 1493 (1984); J. H. Lin et al., J. Low Temp. Phys. 58, 363 (1985). 5. C. W. Chu et al., Phys. Rev. Lett. 58, 405 (1987); C. W. Chu et al., Science 235, 567 (1987). 6. J. G. Bednorz and K. A. M"uller, Z. Phys. B64, 189 (1986).

Examining early-diagenetic processes as a chief sink for carbonate in the aftermath of the Triassic-Jurassic crisis: Hettangian concretions of Muller Canyon, NV, USA

NASA Astrophysics Data System (ADS)

Ritterbush, K. A.; Loyd, S. J.; Corsetti, F. A.; Bottjer, D. J.; Berelson, W.

2015-12-01

Tectonic, climate, and biotic changes across the Triassic-Jurassic transition appear to have resulted in a "carbonate gap" in the rock record of many shallow marine environments. Ecological state changes documented in near-shore settings in both Tethys and Panthassa show an earliest Jurassic switch to sponge-dominated biosiliceous sedimentation regimes. The Sunrise Formation exposed in the Gabbs Valley Range of Nevada (USA) records a peculiar juxtaposition of Hettangian carbonate-rich strata that contain demosponge spicules as the primary bioclast. It is unclear 1) why biocalcifiers were not recorded in higher abundance in this near-shore back-arc basin setting; 2) why carbonates formed following a biosiliceous regime; and 3) what the lithology indicates about post-extinction marine geochemical dynamics. Detailed sedimentological, paleontological, and geochemical analyses were applied to a 20-m thick sequence of limestone and chert in the Muller Canyon area, which is the Auxiliary Stratotype for the Triassic/Jurassic boundary. Concretion anatomy, bioclast microfacies, and oxygen and carbon isotopic signatures all indicate the Hettangian limestones are chiefly diagenetic concretions that all formed very shallowly, some essentially at the sediment-water interface. We infer that local bottom waters and/or pore waters were supersaturated with respect to calcium carbonate and that this contributed to widespread concretion sedimentation independent of biomineralization. Ecological incumbency of the demosponge meadows may have been supported by concurrent augmentation of marine silica concentration and this apparently proved inhospitable to re-colonization of benthic biocalcifying macrofauna. Together the biotic and lithologic consequences of the extinction represent million-year scale ecological restructuring and highlight early diagenetic precipitation as a major sink in long-term regional carbonate cycling. Perhaps the widespread 'carbonate gap' is actually a gap in calcifying macrofauna and the ocean managed to dump alkalinity as diagenetic carbonate.

Laboratory Comparison of the Anti-Bacterial Effects of Spearmint Extract and Hypochlorite Sodium on Enterococcus Faecalis Bacteria.

PubMed

S, Hajimaghsoodi; H, Zandi; M, Bahrami; R, Hakimian

2016-12-01

It is necessary to use irrigation solutions during cleaning and shaping of root canals to efficiently reduce the number of micro organisms. Sodium hypochlorite is used as an effective antibacterial endodontic irrigants. However, the extract of pennyroyal plant has also shown anti-bacterial characteristics comparable with antibacterial drugs. To compare the anti-bacterial effect of spearmint extract on Enterococcus faecalis bacteria with that of sodium hypochlorite 5.25%. In this experimental study, Muller Hinton medium, including 5% sheep blood was prepared. The two solutions used including sodium hypochlorite 5.25% and spearmint extracts were put adjacent to Enterococcus faecalis bacteria after preparing. Two groups, each containing 10 samples, with the total of 20 samples were used. The disks, including each solution were placed 2 cm apart on a plate containing Muller Hinton medium and the bacteria. The plate was subsequently incubated at 37°C for 48 hours. After incubation, the mean diameter of the halo around each disk, which represents the lack of bacterial growth, was measured and compared using a ruler. Penicillin disk was used for positive control and a sterile blank disk containing physiologic serum was utilized as the negative control. This process was repeated 10 times for each solution. Data were analyzed in SPSS 17 statistical software using t -test. The results showed that the mean diameter of halo in the spearmint extract group was zero and in the sodium hypochlorite group it was 23.7 ± 1.49 mm. There was a significant difference between the mean diameter of the lack of growth halo of the spearmint extract and that of hypochlorite sodium 5.25% on Enterococcus faecalis bacteria ( p ≤ 0.001). Considering the limitations of an experimental study, it seems that spearmint extract does not have any anti-bacterial effect against Enterococcus faecalis bacteria, in contrast to hypochlorite sodium 5.25%.

[Effect of Bushen Huoxue Compound on Retinal Müller Cells in High Glucose or AGEs Conditions].

PubMed

Xie, Xue-jun; Song, Ming-xia; Zhang, Mei; Qin, Wei; Wan, Li; Fang, Yang

2015-06-01

To explore the effect of Bushen Huoxue Compound (BHC) on lactate dehydrogenase (LDH) leakage, expressions of vascular endothelial growth factor (VEGF) and VEGF mRNA in retinal Muller cells under high glucose condition or advanced glycosylation end products (AGEs) condition by using serum pharmacological method. The retinal Müller cells of 5-7 days post-natal Sprague Dawley (SD) rats were cultured with modified enzyme-digestion method. Purified retinal Muller cells were cultured in normal conditions, high glucose condition (50 mmol/L) or AGEs (50 mg/L and 100 mg/L) conditions, and BHC-containing serum was added to culture medium. The LDH leakage and VEGF expressions were measured by enzyme-linked immunosorbent assay (ELISA). In addition, the relative expression of VEGF mRNA was tested by reverse transcription polymerase chain reaction (RT-PCR). Compared with the normal control group, expressions of VEGF and VEGF mRNA were significantly increased in the high glucose group, the low dose AGEs group and the high dose AGEs group (all P < 0.01). The LDH leakage was obviously increased in the high dose AGEs group, when compared with the normal control group and the high glucose group (P < 0.01). The LDH leakage, expressions of VEGF and VEGF mRNA were obviously decreased by BHC-containing serum both in high glucose and AGEs conditions (P < 0.05, P < 0.01). BHC-containing serum had no significant effect on the LDH leakage and expressions of VEGF and VEGF mRNA in normal conditions (P > 0.05). AGEs intervention could obviously lower the stability of Müller cell membrane. Up-regulated expressions of VEGF and VEGF mRNA in cultured Müller cells could be induced by AGEs or high glucose. BHC-containing serum could stabilize the stability of Müller cell membrane, inhibit the transcription of VEGF mRNA and decrease the protein expression of VEGF, which might be one of important mechanisms for preventing and treating diabetic retinopathy.

A Genome-Wide Analysis Reveals No Nuclear Dobzhansky-Muller Pairs of Determinants of Speciation between S. cerevisiae and S. paradoxus, but Suggests More Complex Incompatibilities

PubMed Central

Kao, Katy C.; Schwartz, Katja; Sherlock, Gavin

2010-01-01

The Dobzhansky-Muller (D-M) model of speciation by genic incompatibility is widely accepted as the primary cause of interspecific postzygotic isolation. Since the introduction of this model, there have been theoretical and experimental data supporting the existence of such incompatibilities. However, speciation genes have been largely elusive, with only a handful of candidate genes identified in a few organisms. The Saccharomyces sensu stricto yeasts, which have small genomes and can mate interspecifically to produce sterile hybrids, are thus an ideal model for studying postzygotic isolation. Among them, only a single D-M pair, comprising a mitochondrially targeted product of a nuclear gene and a mitochondrially encoded locus, has been found. Thus far, no D-M pair of nuclear genes has been identified between any sensu stricto yeasts. We report here the first detailed genome-wide analysis of rare meiotic products from an otherwise sterile hybrid and show that no classic D-M pairs of speciation genes exist between the nuclear genomes of the closely related yeasts S. cerevisiae and S. paradoxus. Instead, our analyses suggest that more complex interactions, likely involving multiple loci having weak effects, may be responsible for their post-zygotic separation. The lack of a nuclear encoded classic D-M pair between these two yeasts, yet the existence of multiple loci that may each exert a small effect through complex interactions suggests that initial speciation events might not always be mediated by D-M pairs. An alternative explanation may be that the accumulation of polymorphisms leads to gamete inviability due to the activities of anti-recombination mechanisms and/or incompatibilities between the species' transcriptional and metabolic networks, with no single pair at least initially being responsible for the incompatibility. After such a speciation event, it is possible that one or more D-M pairs might subsequently arise following isolation. PMID:20686707

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rahman, Nur Aira Abd, E-mail: nur-aira@nm.gov.my; Lombigit, Lojius; Abdullah, Nor Arymaswati

This paper presents the design of new digital radiation survey meter with LND7121 Geiger Muller tube detector and Atmega328P microcontroller. Development of the survey meter prototype is carried out on Arduino Uno platform. 16-bit Timer1 on the microcontroller is utilized as external pulse counter to produce count per second or CPS measurement. Conversion from CPS to dose rate technique is also performed by Arduino to display results in micro Sievert per hour (μSvhr{sup −1}). Conversion factor (CF) value for conversion of CPM to μSvhr{sup −1} determined from manufacturer data sheet is compared with CF obtained from calibration procedure. The surveymore » meter measurement results are found to be linear for dose rates below 3500 µSv/hr.« less

Arduino based radiation survey meter

NASA Astrophysics Data System (ADS)

Rahman, Nur Aira Abd; Lombigit, Lojius; Abdullah, Nor Arymaswati; Azman, Azraf; Dolah, Taufik; Muzakkir, Amir; Jaafar, Zainudin; Mohamad, Glam Hadzir Patai; Ramli, Abd Aziz Mhd; Zain, Rasif Mohd; Said, Fazila; Khalid, Mohd Ashhar; Taat, Muhamad Zahidee

2016-01-01

This paper presents the design of new digital radiation survey meter with LND7121 Geiger Muller tube detector and Atmega328P microcontroller. Development of the survey meter prototype is carried out on Arduino Uno platform. 16-bit Timer1 on the microcontroller is utilized as external pulse counter to produce count per second or CPS measurement. Conversion from CPS to dose rate technique is also performed by Arduino to display results in micro Sievert per hour (μSvhr-1). Conversion factor (CF) value for conversion of CPM to μSvhr-1 determined from manufacturer data sheet is compared with CF obtained from calibration procedure. The survey meter measurement results are found to be linear for dose rates below 3500 µSv/hr.

On the accuracy of analytical models of impurity segregation during directional melt crystallization and their applicability for quantitative calculations

NASA Astrophysics Data System (ADS)

Voloshin, A. E.; Prostomolotov, A. I.; Verezub, N. A.

2016-11-01

The paper deals with the analysis of the accuracy of some one-dimensional (1D) analytical models of the axial distribution of impurities in the crystal grown from a melt. The models proposed by Burton-Prim-Slichter, Ostrogorsky-Muller and Garandet with co-authors are considered, these models are compared to the results of a two-dimensional (2D) numerical simulation. Stationary solutions as well as solutions for the initial transient regime obtained using these models are considered. The sources of errors are analyzed, a conclusion is made about the applicability of 1D analytical models for quantitative estimates of impurity incorporation into the crystal sample as well as for the solution of the inverse problems.

The critical role of social workers in home-based primary care.

PubMed

Reckrey, Jennifer M; Gettenberg, Gabrielle; Ross, Helena; Kopke, Victoria; Soriano, Theresa; Ornstein, Katherine

2014-01-01

The growing homebound population has many complex biomedical and psychosocial needs and requires a team-based approach to care (Smith, Ornstein, Soriano, Muller, & Boal, 2006). The Mount Sinai Visiting Doctors Program (MSVD), a large interdisciplinary home-based primary care program in New York City, has a vibrant social work program that is integrated into the routine care of homebound patients. We describe the assessment process used by MSVD social workers, highlight examples of successful social work care, and discuss why social workers' individualized care plans are essential for keeping patients with chronic illness living safely in the community. Despite barriers to widespread implementation, such social work involvement within similar home-based clinical programs is essential in the interdisciplinary care of our most needy patients.

A school investigation into Chernobyl fallout

NASA Astrophysics Data System (ADS)

Plant, R. D.

1988-01-01

The nuclear power station operating at Chernobyl, just north of Kiev in the Ukraine, USSR, contains four RBMK reactors operating at 1000 MW each. The RBMK reactor is a graphite moderated light water cooled reactor using low enriched uranium fuel. Early on Saturday 26 April 1986 a serious accident occurred to one of the four reactors resulting in the release of radioactive material, some of which was carried by the wind northwards across Poland and Scandinavia. The Ursuline Convent School at Westgate-on-Sea is situated in a small seaside town on the North Kent coast. On 30 April the background count was measured in the physics laboratory of the school using a Mullard ZP1481 Geiger-Muller tube in conjunction with a Panax scaler.

Batteryless magneto-driven portable radiac

DOEpatents

Waechter, David A.; Bjarke, George O.; Trujillo, Faustin; Wolf, Michael A.; Umbarger, C. John

1986-01-01

A hand-powered alternator for generating an alternating voltage provides same through a rectifier to a high capacity capacitor which stores the resultant dc voltage and drives a voltage regulator to provide a constant low voltage output for a portable radiation detection instrument. The instrument includes a Geiger-Muller detector tube whose output is fed to a pulse detector and then through an event counter and LCD driver circuit to an LCD bar graph for visual display. An audio driver and an audio output is also provided. All circuitry used is low power so that the capacitor can be readily charged to a sufficient level to provide power for at least 30 minutes. A low voltage indicator is provided on the LCD display to indicate the need for manual recharging.

The role of the CN vibration in the activated dynamics of LiNC<−>LiCN isomerization in an argon solvent at high temperatures.

PubMed

Garcia-Muller, Pablo L; Hernandez, Rigoberto; Benito, R M; Borondo, F

2014-08-21

The isomerization between CN-Li and Li-CN in an argon bath provides a paradigmatic example of a reaction in a solvent with tunable coupling. In previous work, we found that the rates exhibited a turnover with the density of the argon bath in the limit that the CN bond was held fixed [P. L. Garcia-Muller, R. Hernandez, R. M. Benito, and F. Borondo, J. Chem. Phys. 137, 204301 (2012)]. Here, we report the effect of the CN bond vibration on the dynamics and the persistence of the turnover. As hypothesized earlier, the CN bond is indeed weakly coupled with the reaction path despite the presence of the argon cage.

The adhesion and hysteresis effect in friction skin with artificial materials

NASA Astrophysics Data System (ADS)

Subhi, K. A.; Tudor, A.; Hussein, E. K.; Wahad, H. S.

2017-02-01

Human skin is a soft biomaterial with a complex anatomical structure and it has a complex material behavior during the mechanical contact with objects and surfaces. The friction adhesion component is defined by means of the theories of Johnson-Kendall-Roberts (JKR), Derjaguin-Muller-Toporov (DMT) and Maugis - Dugdale (MD). We shall consider the human skin entering into contact with a rigid surface. The deformation (hysteresis) component of the skin friction is evaluated with Voigt rheological model for the spherical contact, with the original model, developed in MATHCAD software. The adhesive component of the skin friction is greater than the hysteresis component for all friction parameters (load, velocity, the strength of interface between skin and the artificial material).

Using concatenated quantum codes for universal fault-tolerant quantum gates.

PubMed

Jochym-O'Connor, Tomas; Laflamme, Raymond

2014-01-10

We propose a method for universal fault-tolerant quantum computation using concatenated quantum error correcting codes. The concatenation scheme exploits the transversal properties of two different codes, combining them to provide a means to protect against low-weight arbitrary errors. We give the required properties of the error correcting codes to ensure universal fault tolerance and discuss a particular example using the 7-qubit Steane and 15-qubit Reed-Muller codes. Namely, other than computational basis state preparation as required by the DiVincenzo criteria, our scheme requires no special ancillary state preparation to achieve universality, as opposed to schemes such as magic state distillation. We believe that optimizing the codes used in such a scheme could provide a useful alternative to state distillation schemes that exhibit high overhead costs.

A radionuclide counting technique for measuring wind velocity. [drag force anemometers

NASA Technical Reports Server (NTRS)

Singh, J. J.; Khandelwal, G. S.; Mall, G. H.

1981-01-01

A technique for measuring wind velocities of meteorological interest is described. It is based on inverse-square-law variation of the counting rates as the radioactive source-to-counter distance is changed by wind drag on the source ball. Results of a feasibility study using a weak bismuth 207 radiation source and three Geiger-Muller radiation counters are reported. The use of the technique is not restricted to Martian or Mars-like environments. A description of the apparatus, typical results, and frequency response characteristics are included. A discussion of a double-pendulum arrangement is presented. Measurements reported herein indicate that the proposed technique may be suitable for measuring wind speeds up to 100 m/sec, which are either steady or whose rates of fluctuation are less than 1 kHz.

A novel polarization demodulation method using polarization beam splitter (PBS) for dynamic pressure sensor

NASA Astrophysics Data System (ADS)

Su, Yang; Zhou, Hua; Wang, Yiming; Shen, Huiping

2018-03-01

In this paper we propose a new design to demodulate polarization properties induced by pressure using a PBS (polarization beam splitter), which is different with traditional polarimeter based on the 4-detector polarization measurement approach. The theoretical model is established by Muller matrix method. Experimental results confirm the validity of our analysis. Proportional relationships and linear fit are found between output signal and applied pressure. A maximum sensitivity of 0.092182 mv/mv is experimentally achieved and the frequency response exhibits a <0.14 dB variation across the measurement bandwidth. The sensitivity dependence on incident SOP (state of polarization) is investigated. The simple and all-fiber configuration, low-cost and high speed potential make it promising for fiber-based dynamic pressure sensing.

Existence conditions for unknown input functional observers

NASA Astrophysics Data System (ADS)

Fernando, T.; MacDougall, S.; Sreeram, V.; Trinh, H.

2013-01-01

This article presents necessary and sufficient conditions for the existence and design of an unknown input Functional observer. The existence of the observer can be verified by computing a nullspace of a known matrix and testing some matrix rank conditions. The existence of the observer does not require the satisfaction of the observer matching condition (i.e. Equation (16) in Hou and Muller 1992, 'Design of Observers for Linear Systems with Unknown Inputs', IEEE Transactions on Automatic Control, 37, 871-875), is not limited to estimating scalar functionals and allows for arbitrary pole placement. The proposed observer always exists when a state observer exists for the unknown input system, and furthermore, the proposed observer can exist even in some instances when an unknown input state observer does not exist.

Chromosomes, conflict, and epigenetics: chromosomal speciation revisited.

PubMed

Brown, Judith D; O'Neill, Rachel J

2010-01-01

Since Darwin first noted that the process of speciation was indeed the "mystery of mysteries," scientists have tried to develop testable models for the development of reproductive incompatibilities-the first step in the formation of a new species. Early theorists proposed that chromosome rearrangements were implicated in the process of reproductive isolation; however, the chromosomal speciation model has recently been questioned. In addition, recent data from hybrid model systems indicates that simple epistatic interactions, the Dobzhansky-Muller incompatibilities, are more complex. In fact, incompatibilities are quite broad, including interactions among heterochromatin, small RNAs, and distinct, epigenetically defined genomic regions such as the centromere. In this review, we will examine both classical and current models of chromosomal speciation and describe the "evolving" theory of genetic conflict, epigenetics, and chromosomal speciation.

Characterization of a symbol rate timing recovery technique for a 2B1Q digital receiver

NASA Astrophysics Data System (ADS)

Aboulnasr, T.; Hage, M.; Sayar, B.; Aly, S.

1994-02-01

This paper presents a study of several implementations of the Mueller and Muller symbol rate timing recovery algorithm for ISDN transmission over digital subscriber loops (DSL). Implementations of this algorithm using various estimates of a specified timing function are investigated. It will be shown that despite the fact that all of the estimates considered are derived based on one set of conditions, their performance varies widely in a real system. The intrinsic properties of these estimates are first analyzed, then their performance on real subscriber loops is studied through extensive simulations of a practical digital receiver. The effect of various system parameters such as channel distortion and additive noise are included. Possible sources of convergence problems are also identified and corrective action proposed.

[Determination of mRNA-transcripts and heat shock proteins HSP70 and HSP90 in retina of the adult Spanish Ribbed Newt Pleurodeles waltl].

PubMed

Avdonin, P P; Markitantova, Yu V; Poplinskaya, V A; Grigoryan, E N

2013-01-01

Expression of genes and heat shock proteins in normal intact retina of the Spanish Ribbed Newt Pleurodeles waltl was studied using polymerase chain reaction, Western blot hybridization, and immunohistochemistry. It was shown that the proteins HSP70 and HSP90, as well as their encoding transcripts of relevant genes, are constitutively expressed in eye tissues. These proteins were distributed differentially, and they were characterized by expression of different levels in the retina: HSP70 dominated in the external retina, while HSP90 dominated in the internal one, in particular, in Muller glial cells and the optic nerve. Transcripts and heat shock proteins HSP70 and HSP90 were also found in the retinal pigment epithelium and eye growth zone.

VizieR Online Data Catalog: Double-peaked narrow lines in AGN. II. z<0.1 (Nevin+, 2016)

NASA Astrophysics Data System (ADS)

Nevin, R.; Comerford, J.; Muller-Sanchez, F.; Barrows, R.; Cooper, M.

2017-02-01

To determine the nature of 71 Type 2 AGNs with double-peaked [OIII] emission lines in SDSS that are at z<0.1 and further characterize their properties, we observe them using two complementary follow-up methods: optical long-slit spectroscopy and Jansky Very Large Array (VLA) radio observations. We use various spectrographs with similar pixel scales (Lick Kast Spectrograph; Palomar Double Spectrograph; MMT Blue Channel Spectrograph; APO Dual Imaging Spectrograph and Keck DEep Imaging Multi-Object Spectrograph. We use a 1200 lines/mm grating for all spectrographs; see table 1. In future work, we will combine our long-slit observations with the VLA data for the full sample of 71 galaxies (O. Muller-Sanchez+ 2016, in preparation). (4 data files).

Science for Survival: The Modern Synthesis of Evolution and The Biological Sciences Curriculum Study

NASA Astrophysics Data System (ADS)

Green, Lisa Anne

In this historical dissertation, I examined the process of curriculum development in the Biological Sciences Curriculum Study (BSCS) in the United States during the period 1959-1963. The presentation of evolution in the high school texts was based on a more robust form of Darwinian evolution which developed during the 1930s and 1940s called "the modern synthesis of evolution." Building primarily on the work of historians Vassiliki Smocovitis and John L. Rudolph, I used the archival papers and published writings of the four architects of the modern synthesis and the four most influential leaders of the BSCS in regards to evolution to investigate how the modern synthetic theory of evolution shaped the BSCS curriculum. The central question was "Why was evolution so important to the BSCS to make it the central theme of the texts?" Important answers to this question had already been offered in the historiography, but it was still not clear why every citizen in the world needed to understand evolution. I found that the emphasis on natural selection in the modern synthesis shifted the focus away from humans as passive participants to the recognition that humans are active agents in their own cultural and biological evolution. This required re-education of the world citizenry, which was accomplished in part by the BSCS textbooks. I also found that BSCS leaders Grobman, Glass, and Muller had serious concerns regarding the effects of nuclear radiation on the human gene pool, and were actively involved in informing th public. Lastly, I found that concerns of 1950s reform eugenicists were addressed in the BSCS textbooks, without mentioning eugenics by name. I suggest that the leaders of the BSCS, especially Bentley Glass and Hermann J. Muller, thought that students needed to understand genetics and evolution to be able to make some of the tough choices they might be called on to make as the dominant species on earth and the next reproductive generation in the nuclear age. This was science for survival.

Resistance may be an important mechanism by which marine microbes respond to environmental toxicants*1

NASA Astrophysics Data System (ADS)

Capriulo, Gerard M.; Flanzenbaum, Jeffrey; Wurster, Charles F.; Rowland, R. George

1983-11-01

The hypothesis, that at least certain marine microbial organisms respond to toxic stress by the development of resistance, was tested using the hypotric marine ciliate Euplotes vannus Muller as the test organism. Resistance to polychlorinated biphenyls (PCB, Aroclor 1254) was developed in E. vannus by exposing the animals to progressively higher PCB concentrations during a period of several months. The resistance to PCB persisted for at least 80 days (greater than 40 generations) after final exposure. This suggests either that genetic selection or persistent (lasting over many cell division cycles) phenotypic trait modification, possibly in the form of Dauermodification, had occurred. If resistance were widespread among marine microbial organisms in polluted environments it would be an important consideration in evaluating the long-term biological impact of both natural and man-induced chemical stress.

Genome-wide mapping in a house mouse hybrid zone reveals hybrid sterility loci and Dobzhansky-Muller interactions.

PubMed

Turner, Leslie M; Harr, Bettina

2014-12-09

Mapping hybrid defects in contact zones between incipient species can identify genomic regions contributing to reproductive isolation and reveal genetic mechanisms of speciation. The house mouse features a rare combination of sophisticated genetic tools and natural hybrid zones between subspecies. Male hybrids often show reduced fertility, a common reproductive barrier between incipient species. Laboratory crosses have identified sterility loci, but each encompasses hundreds of genes. We map genetic determinants of testis weight and testis gene expression using offspring of mice captured in a hybrid zone between M. musculus musculus and M. m. domesticus. Many generations of admixture enables high-resolution mapping of loci contributing to these sterility-related phenotypes. We identify complex interactions among sterility loci, suggesting multiple, non-independent genetic incompatibilities contribute to barriers to gene flow in the hybrid zone.

An FMM-FFT Accelerated SIE Simulator for Analyzing EM Wave Propagation in Mine Environments Loaded With Conductors

PubMed Central

Sheng, Weitian; Zhou, Chenming; Liu, Yang; Bagci, Hakan; Michielssen, Eric

2018-01-01

A fast and memory efficient three-dimensional full-wave simulator for analyzing electromagnetic (EM) wave propagation in electrically large and realistic mine tunnels/galleries loaded with conductors is proposed. The simulator relies on Muller and combined field surface integral equations (SIEs) to account for scattering from mine walls and conductors, respectively. During the iterative solution of the system of SIEs, the simulator uses a fast multipole method-fast Fourier transform (FMM-FFT) scheme to reduce CPU and memory requirements. The memory requirement is further reduced by compressing large data structures via singular value and Tucker decompositions. The efficiency, accuracy, and real-world applicability of the simulator are demonstrated through characterization of EM wave propagation in electrically large mine tunnels/galleries loaded with conducting cables and mine carts. PMID:29726545

The Mistaken Birth and Adoption of LNT: An Abridged Version

PubMed Central

Calabrese, Edward J.

2017-01-01

The historical foundations of cancer risk assessment were based on the discovery of X-ray-induced gene mutations by Hermann J. Muller, its transformation into the linear nonthreshold (LNT) single-hit theory, the recommendation of the model by the US National Academy of Sciences, Biological Effects of Atomic Radiation I, Genetics Panel in 1956, and subsequent widespread adoption by regulatory agencies worldwide. This article summarizes substantial recent historical revelations of this history, which profoundly challenge the standard and widely acceptable history of cancer risk assessment, showing multiple significant scientific errors and incorrect interpretations, mixed with deliberate misrepresentation of the scientific record by leading ideologically motivated radiation geneticists. These novel historical findings demonstrate that the scientific foundations of the LNT single-hit model were seriously flawed and should not have been adopted for cancer risk assessment. PMID:29051718

Four passive sampling elements (quatrefoil)--I. Monitoring radon and its progeny by surface-contamination monitors.

PubMed

Tommasino, L; Tokonami, S

2011-05-01

Four passive sampling elements (quatrefoil) have been recently developed, which transform airborne radionuclides into surface-bound radionuclides. These samplers, once exposed, result in thin radiation sources that can be detected by any real-time or passive detector. In particular, by using a large collecting-area sampler with a low surface density (g cm(-2)), it is possible to measure radon and its decay products by beta surface-contamination monitors, which are rarely used for these applications. The results obtained to date prove that it is finally possible to carry out the measurements of radon (and its decay products) indoors, in soil and in water simply by a Pancake Geiger-Muller counter. Emphasis will be given to those measurements, which are difficult, if not impossible, to carry out with existing technologies.

Common angle plots as perception-true visualizations of categorical associations.

PubMed

Hofmann, Heike; Vendettuoli, Marie

2013-12-01

Visualizations are great tools of communications-they summarize findings and quickly convey main messages to our audience. As designers of charts we have to make sure that information is shown with a minimum of distortion. We have to also consider illusions and other perceptual limitations of our audience. In this paper we discuss the effect and strength of the line width illusion, a Muller-Lyer type illusion, on designs related to displaying associations between categorical variables. Parallel sets and hammock plots are both affected by line width illusions. We introduce the common-angle plot as an alternative method for displaying categorical data in a manner that minimizes the effect from perceptual illusions. Results from user studies both highlight the need for addressing line-width illusions in displays and provide evidence that common angle charts successfully resolve this issue.

GeoComplexity and scale: surface processes and remote sensing of geosystems. GeoComplexity and scale: surface processes and remote sensing of geosystems

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter

2015-04-01

Understanding the role of scaling in different planetary surface processes within our Solar System is one of the fundamental goals of planetary and solid earth scientific research. There has been a revolution in planetary surface observations over the past decade for the Earth, Mars and the Moon, especially in 3D imaging of surface shape (from the planetary scale down to resolutions of 75cm). I will examine three areas that I have been active in over the last 25 years giving examples of newly processed global datasets ripe for scaling analysis: topography, BRDF/albedo and imaging. For understanding scaling in terrestrial land surface topography we now have global 30m digital elevation models (DEMs) from different types of sensors (InSAR and stereo-optical) along with laser altimeter data to provide global reference models (to better than 1m in cross-over areas) and airborne laser altimeter data over small areas at resolutions better than 1m and height accuracies better than 10-15cm. We also have an increasing number of sub-surface observations from long wavelength SAR in arid regions, which will allow us to look at the true surface rather than the one buried by sand. We also still have a major limitation of these DEMs in that they represent an unknown observable surface with C-band InSAR DEMs representing being somewhere near the top of the canopy and X-band InSAR and stereo near the top of the canopy but only P-band representing the true understorey surface. I will present some of the recent highlights of topography on Mars including 3D modelling of surface shape from the ESA Mars Express HRSC (High Resolution Stereo Camera), see [1], [2] at 30-100m grid-spacing; and then co-registered to HRSC using a resolution cascade of 20m DTMs from NASA MRO stereo-CTX and 0.75m digital terrain models (as there is no land cover on Mars) DTMs from MRO stereo-HiRISE [3]. Comparable DTMs now exist for the Moon from 100m up to 1m. I will show examples of these DEM/DTM datasets along with some simple analyses of their scaling properties. Global 1km, 8-daily terrestrial land surface BRDF/albedo maps exist for US sensors from MODIS and by orbit from MISR. More recently, the ESA GlobAlbedo project [4] has produced land surface datasets on the same spatio-temporal sampling using optimal estimation with full uncertainty matrices associated with each and every 1km pixel. By exploiting these uncertainty estimates I show how upscaling can be performed as well as analysing their scaling properties. Recently, a very novel technique for the super-resolution restoration (SRR) of stacks of images has been developed at UCL [5]. First examples shown will be of the entire MER-A Spirit rover traverse taking a stack of 25cm HiRISE to generate a corridor of SRR images along the rover traverse of 5cm imagery of unresolved features such as rocks, created as a consequence of meteoritic bombardment, ridge and valley features. This SRR technique will allow us for ≈400 areas on Mars (where 5 or more HiRISE images have been captured) and similar numbers on the Moon to resolve sub-pixel features. Examples will be shown of how these SRR images can be employed to assist with the better understanding of surface geomorphology. Acknowledgements: The research leading to these results has received funding from the European Union's Seventh Framework Programme (FP7/2007-2013) under PRoViDE grant agreement n˚312377 and the ESA GlobAlbedo project. Partial support is also provided from the STFC "MSSL Consolidated Grant" ST/K000977/1. References: [1] Gwinner, K., F. et al. (2010) Topography of Mars from global mapping by HRSC high-resolution digital terrain models and orthoimages: characteristics and performance. Earth and Planetary Science Letters 294, 506-519, doi:10.1016/j.epsl.2009.11.007, 2010; [2] Gwinner, K., Muller, J-P., et al. (2015) MarsExpress High Resolution Stereo Camera (HRSC) Multi-orbit Data Products: Methodology, Mapping Concepts and Performance for the first Quadrangle (MC-11E). Geophysical Research Abstracts, Vol. 17, EGU2015-13832; [3] Kim, J., & Muller, J. (2009). Multi-resolution topographic data extraction from Martian stereo imagery. Planetary and Space Science, 57, 2095-2112. doi:10.1016/j.pss.2009.09.024; [4] Muller, J.-P., et al. (2011), The ESA GlobAlbedo Project for mapping the Earth's land surface albedo for 15 Years from European Sensors., Geophysical Research Abstracts, Vol. 13, EGU2011-10969; [5] Tao, Y., Muller, J.-P. (2015) Supporting lander and rover operation: a novel super-resolution restoration technique. Geophysical Research Abstracts, Vol. 17, EGU2015-6925

ESO's early history, 1953 - 1975. V. Earliest developments in Chile; 24 March 1966: the road on La Silla dedicated.

NASA Astrophysics Data System (ADS)

Blaauw, A.

1989-12-01

While - as described in the previous article - in Europe Directorate and Council established ESO's administrative basis, and the first telescopes were built or acquired under the guidance of the Instrumentation Committee, work in Chile proceeded equally energetically. Under the leadership of Andre Muller, since January 1, 1964 Superintendent for Chile, a great variety of tasks had to be taken up: building up staff for administration and construction, organizing office facilities, setting up temporary camps as basis for the activities on and around La Silla, learning to know the Chilean world of government and Drovincial authorities-and of contractors, etc. A challenging but demanding assignment! For it is one thing to build up an organization in one's own country with its well-known legal structure and social traditions - but another one to do so in a foreign country with unfamiliar language, different customs and different rules.

Sediment transport simulation in an armoured stream

USGS Publications Warehouse

Milhous, Robert T.; Bradley, Jeffrey B.; Loeffler, Cindy L.

1986-01-01

Improved methods of calculating bed material stability and transport must be developed for a gravel bed stream having an armoured surface in order to use the HEC-6 model to examine channel change. Good possibilities exist for use of a two layer model based on the Schoklitsch and the Einstein-Brown transport equations. In Einstein-Brown the D35 of the armour is used for stabilities and the D50 of the bed (sub-surface) is used for transport. Data on the armour and sub-surface size distribution needs to be obtained as part of a bed material study in a gravel bed river; a "shovel" sample is not adequate. The Meyer-Peter, Muller equation should not be applied to a gravel bed stream with an armoured surface to estimate the initiation of transport or for calculation of transport at low effective bed shear stress.

The antibacterial effect of four mouthwashes against streptococcus mutans and escherichia coli.

PubMed

Ghapanchi, Janan; Lavaee, Fatemeh; Moattari, Afagh; Shakib, Mahmood

2015-04-01

To evaluate the antimicrobial properties of several mouthwash concentrations on oral Streptococcus mutans and Escherichia coli. The study was conducted at Shiraz Medicine School in 2011. Serial dilutions of Chlorohexidin, Oral B and Persica and Irsha (2,4,8,16,64,128) were prepared in Muller-Hinton media. Minimum inhibitory concentration was visually determined and defined as the lowest concentration of each oral washing which inhibited > 95% growth reduction compared to the growth control well. Chlorhexidine, Oral B and Irsha mouthwash inhibited Streptococcus mutans even with diluted concentrations. Also, Chlorhexidine and Oral B prohibited Escherichia coli with different potencies. But Persica had no antimicrobial activity against either Escherichia coli or Streptococcus mutans. Chlorhexidine, Irsha, and Oral B mouthwashes can be used for antimicrobial effects, especially on Streptococcus mutans. This chemical activity of mouthwashes is an adjuvant for mechanical removing of plaque. However, the antimicrobial effect of Persicaremains controversial.

The acylphosphatase (Acyp) alleles associate with male hybrid sterility in Drosophila.

PubMed

Michalak, Pawel; Ma, Daina

2008-06-15

Hybrid defects are believed to result from genetic incompatibilities between genes that have evolved in separate parental lineages. These genetic dysfunctions on the hybrid genomic background, also known as Dobzhansky-Muller incompatibilities, can be an incipient signature of speciation, and as such - a subject of active research. Here we present evidence that Acyp locus (CG16870) that encodes acylphosphatase, a small enzyme that catalyzes the hydrolysis of acylphosphates and participates in ion transport across biological membranes, is involved in genetic incompatibilities leading to male sterility in hybrids between Drosophila simulans and D. mauritiana. There is a strong association between Acyp alleles (genotype) and the sterility/fertility pattern (phenotype), as well as between the phenotype, the genotype and its transcriptional activity. Allele-specific expression in hybrids heterozygous for Acyp suggests a cis-type regulation of this gene, where an allele from one of the parental species (D. simulans) is consistently overexpressed.

Genome-wide mapping in a house mouse hybrid zone reveals hybrid sterility loci and Dobzhansky-Muller interactions

PubMed Central

Turner, Leslie M; Harr, Bettina

2014-01-01

Mapping hybrid defects in contact zones between incipient species can identify genomic regions contributing to reproductive isolation and reveal genetic mechanisms of speciation. The house mouse features a rare combination of sophisticated genetic tools and natural hybrid zones between subspecies. Male hybrids often show reduced fertility, a common reproductive barrier between incipient species. Laboratory crosses have identified sterility loci, but each encompasses hundreds of genes. We map genetic determinants of testis weight and testis gene expression using offspring of mice captured in a hybrid zone between M. musculus musculus and M. m. domesticus. Many generations of admixture enables high-resolution mapping of loci contributing to these sterility-related phenotypes. We identify complex interactions among sterility loci, suggesting multiple, non-independent genetic incompatibilities contribute to barriers to gene flow in the hybrid zone. DOI: http://dx.doi.org/10.7554/eLife.02504.001 PMID:25487987

The Physics of Polarization

NASA Astrophysics Data System (ADS)

Landi Degl'Innocenti, Egidio

2015-10-01

The introductory lecture that has been delivered at this Symposium is a condensed version of an extended course held by the author at the XII Canary Island Winter School from November 13 to November 21, 2000. The full series of lectures can be found in Landi Degl'Innocenti (2002). The original reference is organized in 20 Sections that are here itemized: 1. Introduction, 2. Description of polarized radiation, 3. Polarization and optical devices: Jones calculus and Muller matrices, 4. The Fresnel equations, 5. Dichroism and anomalous dispersion, 6. Polarization in everyday life, 7. Polarization due to radiating charges, 8. The linear antenna, 9. Thomson scattering, 10. Rayleigh scattering, 11. A digression on Mie scattering, 12. Bremsstrahlung radiation, 13. Cyclotron radiation, 14. Synchrotron radiation, 15. Polarization in spectral lines, 16. Density matrix and atomic polarization, 17. Radiative transfer and statistical equilibrium equations, 18. The amplification condition in polarized radiative transfer, and 19. Coupling radiative transfer and statistical equilibrium equations.

Robert Heath Lock and His Textbook of Genetics, 1906

PubMed Central

Edwards, A. W. F.

2013-01-01

Robert Heath Lock (1879–1915), a Cambridge botanist associated with William Bateson and R. C. Punnett, published his book Recent Progress in the Study of Variation, Heredity, and Evolution in 1906. This was a remarkable textbook of genetics for one appearing so early in the Mendelian era. It covered not only Mendelism but evolution, natural selection, biometry, mutation, and cytology. It ran to five editions but was, despite its success, largely forgotten following Lock’s early death in 1915. Nevertheless it was the book that inspired H. J. Muller to do genetics and was remembered by A. H. Sturtevant as the source of the earliest suggestion that linkage might be related to the exchange of parts between homologous chromosomes. Here we also put forward evidence that it had a major influence on the statistician and geneticist R. A. Fisher at the time he was a mathematics student at Cambridge. PMID:23824968

Nurse exposure doses resulted from bone scintigraphy patient

NASA Astrophysics Data System (ADS)

Tunçman, Duygu; Kovan, Bilal; Poyraz, Leyla; ćapali, Veli; Demir, Bayram; Türkmen, Cüneyt

2016-03-01

Bone scintigraphy is used for displaying the radiologic undiagnosed bone lesions in nuclear medicine. It's general indications are researching bone metastases, detection of radiographically occult fractures, staging and follow-up in primary bone tumors, diagnosis of paget's disease, investigation of loosening and infection in orthopedic implants. It is applied with using 99mTc labeled radiopharmaceuticals (e.g 99m Tc MDP,99mTc HEDP and 99mTc HMDP). 20 -25 mCi IV radiotracer was injected into vein and radiotracer emits gamma radiation. Patient waits in isolated room for about 3 hours then a gamma camera scans radiation area and creates an image. When some patient's situation is not good, patients are hospitalized until the scanning because of patients' close contact care need. In this study, measurements were taken from ten patients using Geiger Muller counter. After these measurements, we calculated nurse's exposure radiations from patient's routine treatment, examination and emergency station.

Does apparent size capture attention in visual search? Evidence from the Muller-Lyer illusion.

PubMed

Proulx, Michael J; Green, Monique

2011-11-23

Is perceived size a crucial factor for the bottom-up guidance of attention? Here, a visual search experiment was used to examine whether an irrelevantly longer object can capture attention when participants were to detect a vertical target item. The longer object was created by an apparent size manipulation, the Müller-Lyer illusion; however, all objects contained the same number of pixels. The vertical target was detected more efficiently when it was also perceived as the longer item that was defined by apparent size. Further analysis revealed that the longer Müller-Lyer object received a greater degree of attentional priority than published results for other features such as retinal size, luminance contrast, and the abrupt onset of a new object. The present experiment has demonstrated for the first time that apparent size can capture attention and, thus, provide bottom-up guidance on the basis of perceived salience.

Tooth enamel dosimetric response to 2.8 MeV neutrons

NASA Astrophysics Data System (ADS)

Fattibene, P.; Angelone, M.; Pillon, M.; De Coste, V.

2003-03-01

Tooth enamel dosimetry, based on electron paramagnetic resonance (EPR) spectroscopy, is recognized as a powerful method for individual retrospective dose assessment. The method is mainly used for individual dose reconstruction in the epidemiological studies aimed at the radiation risk analysis. The study of the sensitivity of tooth enamel as a function of radiation quality is one of the main goals of the research in this field. In the present work, tooth enamel dose response in a monoenergetic neutron flux of 2.8 MeV, generated by the D-D reaction, was studied for in air and in phantom irradiations of enamel samples and of whole teeth. EPR measurements were complemented by Monte Carlo calculation and by gamma dose discrimination obtained with thermoluminescent and Geiger-Muller tube measurements. The 2.8 MeV neutrons to 60Co relative sensitivity was 0.33±0.08.

Simplified numerical approach for estimation of effective segregation coefficient at the melt/crystal interface

NASA Astrophysics Data System (ADS)

Prostomolotov, A. I.; Verezub, N. A.; Voloshin, A. E.

2014-09-01

A thermo-gravitational convection and impurity transfer in the melt were investigated using a simplified numerical model for Bridgman GaSb(Te) crystal growth in microgravity conditions. Simplifications were as follows: flat melt/crystal interface, fixed melt sizes and only lateral ampoule heating. Calculations were carried out by Ansys®Fluent® code employing a two-dimensional Navier-Stokes-Boussinesq and heat and mass transfer equations in a coordinate system moving with the melt/crystal interface. The parametric dependence of the effective segregation coefficient Keff at the melt/crystal interface was studied for various ampoule sizes and for microgravity conditions. For the uprising one-vortex flow, the resulting dependences were presented as Keff vs. Vmax-the maximum velocity value. These dependences were compared with the formulas by Burton-Prim-Slichter's, Ostrogorsky-Muller's, as well as with the semi-analytical solutions.

AFM PeakForce QNM mode: Evidencing nanometre-scale mechanical properties of chitin-silica hybrid nanocomposites.

PubMed

Smolyakov, G; Pruvost, S; Cardoso, L; Alonso, B; Belamie, E; Duchet-Rumeau, J

2016-10-20

PeakForce Quantitative Nanomechanical Mapping (QNM) AFM mode was used to explore the mechanical properties of textured chitin-silica hybrid films at the nanoscale. The influence of the force applied by the tip on the sample surface was studied for standard homogeneous samples, for chitin nanorods and for chitin-silica hybrid nanocomposites. Thick films of superimposed chitin nanorods showed a monotonous increase of DMT modulus (based on the Derjaguin-Muller-Toporov model) owing to an increase in modulus at the interface between nanorods due to geometrical constraints of the AFM acquisition. A similar variation of DMT modulus was obtained for chitin-silica hybrid thick films related to mechanical strengthening induced by the presence of silica. This work revealed the role of the organic-inorganic interface, at the nanoscale, in the mechanical behaviour of textured materials using PeakForce QNM mode, with optimized analysis conditions. Copyright © 2016 Elsevier Ltd. All rights reserved.

FE analysis of SMA-based bio-inspired bone-joint system

NASA Astrophysics Data System (ADS)

Yang, S.; Seelecke, S.

2009-10-01

This paper presents the finite element (FE) analysis of a bio-inspired bone-joint system. Motivated by the BATMAV project, which aims at the development of a micro-air-vehicle platform that implements bat-like flapping flight capabilities, we study the actuation of a typical elbow joint, using shape memory alloy (SMA) in a dual manner. Micro-scale martensitic SMA wires are used as 'metal muscles' to actuate a system of humerus, elbow joint and radius, in concert with austenitic wires, which operate as flexible joints due to their superelastic character. For the FE analysis, the humerus and radius are modeled as standard elastic beams, while the elbow joint and muscle wires use the Achenbach-Muller-Seelecke SMA model as beams and cable elements, respectively. The particular focus of the paper is on the implementation of the above SMA model in COMSOL.

Canonical multi-valued input Reed-Muller trees and forms

NASA Technical Reports Server (NTRS)

Perkowski, M. A.; Johnson, P. D.

1991-01-01

There is recently an increased interest in logic synthesis using EXOR gates. The paper introduces the fundamental concept of Orthogonal Expansion, which generalizes the ring form of the Shannon expansion to the logic with multiple-valued (mv) inputs. Based on this concept we are able to define a family of canonical tree circuits. Such circuits can be considered for binary and multiple-valued input cases. They can be multi-level (trees and DAG's) or flattened to two-level AND-EXOR circuits. Input decoders similar to those used in Sum of Products (SOP) PLA's are used in realizations of multiple-valued input functions. In the case of the binary logic the family of flattened AND-EXOR circuits includes several forms discussed by Davio and Green. For the case of the logic with multiple-valued inputs, the family of the flattened mv AND-EXOR circuits includes three expansions known from literature and two new expansions.

Low-momentum ghost dressing function and the gluon mass

DOE Office of Scientific and Technical Information (OSTI.GOV)

Boucaud, Ph.; Leroy, J. P.; Le Yaouanc, A.

2010-09-01

We study the low-momentum ghost propagator Dyson-Schwinger equation in the Landau gauge, assuming for the truncation a constant ghost-gluon vertex, as it is extensively done, and a simple model for a massive gluon propagator. Then, regular Dyson-Schwinger equation solutions (the zero-momentum ghost dressing function not diverging) appear to emerge, and we show the ghost propagator to be described by an asymptotic expression reliable up to the order O(q{sup 2}). That expression, depending on the gluon mass and the zero-momentum Taylor-scheme effective charge, is proven to fit pretty well some low-momentum ghost propagator data [I. L. Bogolubsky, E. M. Ilgenfritz, M.more » Muller-Preussker, and A. Sternbeck, Phys. Lett. B 676, 69 (2009); Proc. Sci., LAT2007 (2007) 290] from big-volume lattice simulations where the so-called ''simulated annealing algorithm'' is applied to fix the Landau gauge.« less

Geoarchaeology and geomorphology of Phoenicus ancient harbor, NW coast of Egypt

NASA Astrophysics Data System (ADS)

Moustafa, Samah; Torab, Magdy

2016-04-01

Phoenicus Greek harbor located in SE coastline of Ras El Hekma area, west of Alexandria city for about 220 km. It is shaped as triangle with its headland extending into the Mediterranean Sea for about 15 km. It is occupied by sedimentary rocks belonging to the Tertiary and Quaternary Eras, the western coastline consists of Pleistocene, Separated polygons of limestone sheets and fossil lime stone, where there are coastal platforms, fluvial forms and solution holes. The location and description of Phoenicus ancient harbor were mentioned by some late writers (Fourtau,1893) & (Muller,1901), some geoarchaeological indicators were discovered by the authors such as fish tanks, well, remains of breakwater and wine press. The present work is mainly devoted to define the geomorphological and geoarchaelological indicators of Phoenicus Greek harbor site, based on detailed geomorphological and geoarchaelogical surveying, sampling, dating and mapping as well as satellite image interpretation and GIS techniques.

Robert Heath Lock and his textbook of genetics, 1906.

PubMed

Edwards, A W F

2013-07-01

Robert Heath Lock (1879-1915), a Cambridge botanist associated with William Bateson and R. C. Punnett, published his book Recent Progress in the Study of Variation, Heredity, and Evolution in 1906. This was a remarkable textbook of genetics for one appearing so early in the Mendelian era. It covered not only Mendelism but evolution, natural selection, biometry, mutation, and cytology. It ran to five editions but was, despite its success, largely forgotten following Lock's early death in 1915. Nevertheless it was the book that inspired H. J. Muller to do genetics and was remembered by A. H. Sturtevant as the source of the earliest suggestion that linkage might be related to the exchange of parts between homologous chromosomes. Here we also put forward evidence that it had a major influence on the statistician and geneticist R. A. Fisher at the time he was a mathematics student at Cambridge.

Progress in superconductivity: The Indian Scenario

NASA Technical Reports Server (NTRS)

Multani, Manu; Mishra, V. K.

1995-01-01

India has made rapid progress in the field of high temperature superconductivity, beginning at the time of publication of the Zeitschrift fur Physik paper by Bednorz and Muller. Phase 1 of the program was conceived by the Department of Science & Technology of the Government of India. It consisted of 42 projects in the area of basic research, 23 projects in applications and 4 short-term demonstration studies. The second phase started in October 1991 and will run through March 1995. It consists of 50 basic research programs and 24 application programs. The total investment, mainly consisting of infrastructural development to supplement existing facilities and hiring younger people, has amounted to about Indian Rupees 40 crores, equivalent to about US$ 13 million. The expenditure for the period 1992-1997 shall be up to about Rs. 27 crores, equivalent to about US$ 9 million. The basic idea is to keep pace with developments around the world.

Multiple zeros of polynomials

NASA Technical Reports Server (NTRS)

Wood, C. A.

1974-01-01

For polynomials of higher degree, iterative numerical methods must be used. Four iterative methods are presented for approximating the zeros of a polynomial using a digital computer. Newton's method and Muller's method are two well known iterative methods which are presented. They extract the zeros of a polynomial by generating a sequence of approximations converging to each zero. However, both of these methods are very unstable when used on a polynomial which has multiple zeros. That is, either they fail to converge to some or all of the zeros, or they converge to very bad approximations of the polynomial's zeros. This material introduces two new methods, the greatest common divisor (G.C.D.) method and the repeated greatest common divisor (repeated G.C.D.) method, which are superior methods for numerically approximating the zeros of a polynomial having multiple zeros. These methods were programmed in FORTRAN 4 and comparisons in time and accuracy are given.

Two hump-shaped angular distributions of neutrons and soft X-rays in a small plasma focus device.

PubMed

Habibi, Morteza

2018-03-01

Angular distributions of soft X-rays (SXRs) and neutrons emitted by a small plasma focus device (PFD) were investigated simultaneously using TLD-100 dosimeters and Geiger-Muller activation counters, respectively. The distributions represented two humps with a small dip at the angular position 0° and reduced from the angles of ± 15° and ± 30° for the neutrons and SXRs, respectively. The maximum yield of 2.98 × 10 8 neutrons per shot of the device was obtained at 13.5kV and 6.5mbar. A time of flight (TOF) of 75.2ns between the hard X-ray and the neutron peaks corresponds to neutrons with energy of 2.67MeV. A similar behavior was observed between the angular distributions of neutron and soft X-ray emissions. Copyright © 2018 Elsevier Ltd. All rights reserved.

Polymorphic mimicry, microhabitat use, and sex-specific behaviour.

PubMed

Joron, M

2005-05-01

In order to assess the adaptive importance of microhabitat segregation for the maintenance of mimetic diversity, I explore how flight height varies between the sympatric forms of the polymorphic butterfly Heliconius numata and their respective models in the genus Melinaea. There is no evidence for vertical stratification of mimicry rings in these tiger-patterned butterflies, but males of H. numata tend to fly significantly higher than females and the Melinaea models. This difference in microhabitat preference likely results from females searching for host plants whereas males are patrolling for mates. I then present an extension of Muller's mimicry model for the case of partial behavioural or spatial segregation of sexes. The analysis suggests that sex-specific behaviours can make mimicry more beneficial, simply by reducing the effective population size participating in mimicry. The interaction between mimicry and sex-specific behaviours may therefore facilitate the evolution of polymorphism via enhanced, fine-scale local adaptation.

On-line remote monitoring of radioactive waste repositories

NASA Astrophysics Data System (ADS)

Calì, Claudio; Cosentino, Luigi; Litrico, Pietro; Pappalardo, Alfio; Scirè, Carlotta; Scirè, Sergio; Vecchio, Gianfranco; Finocchiaro, Paolo; Alfieri, Severino; Mariani, Annamaria

2014-12-01

A low-cost array of modular sensors for online monitoring of radioactive waste was developed at INFN-LNS. We implemented a new kind of gamma counter, based on Silicon PhotoMultipliers and scintillating fibers, that behaves like a cheap scintillating Geiger-Muller counter. It can be placed in shape of a fine grid around each single waste drum in a repository. Front-end electronics and an FPGA-based counting system were developed to handle the field data, also implementing data transmission, a graphical user interface and a data storage system. A test of four sensors in a real radwaste storage site was performed with promising results. Following the tests an agreement was signed between INFN and Sogin for the joint development and installation of a prototype DMNR (Detector Mesh for Nuclear Repository) system inside the Garigliano radwaste repository in Sessa Aurunca (CE, Italy). Such a development is currently under way, with the installation foreseen within 2014.

Golay sequences coded coherent optical OFDM for long-haul transmission

NASA Astrophysics Data System (ADS)

Qin, Cui; Ma, Xiangrong; Hua, Tao; Zhao, Jing; Yu, Huilong; Zhang, Jian

2017-09-01

We propose to use binary Golay sequences in coherent optical orthogonal frequency division multiplexing (CO-OFDM) to improve the long-haul transmission performance. The Golay sequences are generated by binary Reed-Muller codes, which have low peak-to-average power ratio and certain error correction capability. A low-complexity decoding algorithm for the Golay sequences is then proposed to recover the signal. Under same spectral efficiency, the QPSK modulated OFDM with binary Golay sequences coding with and without discrete Fourier transform (DFT) spreading (DFTS-QPSK-GOFDM and QPSK-GOFDM) are compared with the normal BPSK modulated OFDM with and without DFT spreading (DFTS-BPSK-OFDM and BPSK-OFDM) after long-haul transmission. At a 7% forward error correction code threshold (Q2 factor of 8.5 dB), it is shown that DFTS-QPSK-GOFDM outperforms DFTS-BPSK-OFDM by extending the transmission distance by 29% and 18%, in non-dispersion managed and dispersion managed links, respectively.

EU-FP7-iMARS: Analysis of Mars Multi-Resolution Images Using Auto-Coregistration Data Mining and Crowd Source Techniques: Processed Results - a First Look

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter; Tao, Yu; Sidiropoulos, Panagiotis; Gwinner, Klaus; Willner, Konrad; Fanara, Lida; Waehlisch, Marita; van Gasselt, Stephan; Walter, Sebastian; Steikert, Ralf; Schreiner, Bjoern; Ivanov, Anton; Cantini, Federico; Wardlaw, Jessica; Morley, Jeremy; Sprinks, James; Giordano, Michele; Marsh, Stuart; Kim, Jungrack; Houghton, Robert; Bamford, Steven

2016-06-01

Understanding planetary atmosphere-surface exchange and extra-terrestrial-surface formation processes within our Solar System is one of the fundamental goals of planetary science research. There has been a revolution in planetary surface observations over the last 15 years, especially in 3D imaging of surface shape. This has led to the ability to overlay image data and derived information from different epochs, back in time to the mid 1970s, to examine changes through time, such as the recent discovery of mass movement, tracking inter-year seasonal changes and looking for occurrences of fresh craters. Within the EU FP-7 iMars project, we have developed a fully automated multi-resolution DTM processing chain, called the Coregistration ASP-Gotcha Optimised (CASP-GO), based on the open source NASA Ames Stereo Pipeline (ASP) [Tao et al., this conference], which is being applied to the production of planetwide DTMs and ORIs (OrthoRectified Images) from CTX and HiRISE. Alongside the production of individual strip CTX & HiRISE DTMs & ORIs, DLR [Gwinner et al., 2015] have processed HRSC mosaics of ORIs and DTMs for complete areas in a consistent manner using photogrammetric bundle block adjustment techniques. A novel automated co-registration and orthorectification chain has been developed by [Sidiropoulos & Muller, this conference]. Using the HRSC map products (both mosaics and orbital strips) as a map-base it is being applied to many of the 400,000 level-1 EDR images taken by the 4 NASA orbital cameras. In particular, the NASA Viking Orbiter camera (VO), Mars Orbiter Camera (MOC), Context Camera (CTX) as well as the High Resolution Imaging Science Experiment (HiRISE) back to 1976. A webGIS has been developed [van Gasselt et al., this conference] for displaying this time sequence of imagery and will be demonstrated showing an example from one of the HRSC quadrangle map-sheets. Automated quality control [Sidiropoulos & Muller, 2015] techniques are applied to screen for suitable images and these are extended to detect temporal changes in features on the surface such as mass movements, streaks, spiders, impact craters, CO2 geysers and Swiss Cheese terrain. For result verification these data mining techniques are then being employed within a citizen science project within the Zooniverse family. Examples of data mining and its verification will be presented.

Laser Induced Fluorescence Imaging: Searching for Organics from the Dry Valleys of Queen Maud Land Antarctica to the Regolith and Ices of Mars

NASA Astrophysics Data System (ADS)

Storrie-Lombardi, M. C.; Sattler, B.; Muller, J.-P.; Fisk, M.; Cousins, C.; Dartnell, L.

2009-04-01

Laser induced fluorescence imaging using excitation in ultraviolet (UV) wavelengths has been proposed as a nondestructive astrobiological rapid survey tool to search for amino and nucleic acids [1], microbial life [2], and polycyclic aromatic hydrocarbons (PAHs) deep in the Mars regolith [3, 4]. However, the technique is easily adapted to search for complex biomolecular targets using longer wavelength sources [5]. Of particular interest is the ability of excitation at 532 nm to detect photosynthetic pigments in cyanobacteria-dominated microbial communities populating the ice of alpine, Arctic, and Antarctic lakes, glaciers, and ice sheets [6-8]. During the months of November and December 2008 we tested the technique as part of an extended international, interdisciplinary field campaign in the Dry Valleys of Schirmacher Oasis and Lake Untersee, Queen Maud Land, Antarctica. In this paper we review our recent laboratory experiments on the use of UV excitation for detection of PAHs doped on Mars analogue soils [9] and chasmo- and epilithic lichen communities within basaltic Iceland lavas. We present for the first time the results of our field experiments conducted during the Tawani 2008 International Antarctic Expedition for in situ detection and quantification of photosynthetic biomass in the ice caps of annual and perennially ice-covered Antarctic lakes. We discuss the advantages of using a nondestructive rapid survey photonic tools such as laser induced fluorescence imaging that can be easily implemented from lander, rover, airborne, or orbital platforms. The techniques presented can be utilized to monitor the microbial potential of large, critical ecosystems on Earth, or to facilitate the remote or manned search for organics and photosynthetic life on any terrestrial planet. References 1. Storrie-Lombardi, M.C., Hug, W.F., McDonald, G.D., Tsapin, A.I., and Nealson, K.H. 2001. Hollow cathode ion lasers for deep ultraviolet Raman spectroscopy and fluorescence imaging. Rev. Sci. Ins., 72(12): 4452-4459. 2. Nealson, K.H., Tsapin, A., and Storrie-Lombardi, M. 2002. Searching for life in the universe: unconventional methods for an unconventional problem. International Microbio., 5: 223-230. 3. Storrie-Lombardi, M.C., Muller, J.-P., Fisk, M.R., Griffiths, A.D., and Coates, A.J. 2008a. Potential for non-destructive astrochemistry using the ExoMars PanCam. Geophys. Res. Lett., 35: L12201, doi 10.1029/2008GL034296. 4. Storrie-Lombardi, M.C., Muller, J.-P., Fisk, M.R., Griffiths, A.D., and Coates, A.J. 2008b. Epifluorescence surveys of extreme environments using PanCam imaging systems: Antarctica and the Mars regolith. Instruments, Methods, and Missions for Astrobiology XI (R.B. Hoover, G.V. Levin, & A.Y. Rozanov, Eds.) Proc. SPIE, 7097 (25): 1-10. 5. Storrie-Lombardi, M.C. 2005. Post-Bayesian strategies to optimize astrobiology instrument suites: lessons from Antarctica and the Pilbara. Astrobiology and Planetary Missions (R. B. Hoover, G. V. Levin and A. Y. Rozanov, Eds.), Proc. SPIE, 5906: 288-301. 6. Psenner, R. and Sattler, B. 1998. Life at the freezing point. Science, 280: 2073-2074. 7. Sattler, B., Puxbaum, H., and Psenner, R. 2001. Bacterial growth in supercooled cloud droplets. Geophys. Res. Ltrs., 28(2): 239-242. 8. Sattler, B., Waldhuber, S., Fischer, H., Semmler, H., Sipiera, P., and Psenner, R. 2004. Microbial activity and phylogeny in ice cores retrieved from Lake Paula, a newly detected freshwater lake in Antarctica. Instruments, Methods, and Missions for Astrobiology VIII (R. B. Hoover, G. V. Levin and A. Y. Rozanov, Eds.) Proc. SPIE, 5555: 170-179. 9. Muller, J.-P., Storrie-Lombardi, M.C., Fisk, M.R., Coates, A., Griffiths, A., Rees, K., Walton, D., Theobald, C., Brockley-Blatt, C., and Rousseau, A. 2009. WALI - Wide Angle Laser Imaging enhancement to ExoMars PanCam: a system for organics and life detection in European Geosciences Union General Assembly 2009. Vienna, Austria.

Novel 3D imaging techniques for improved understanding of planetary surface geomorphology.

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter

2015-04-01

Understanding the role of different planetary surface formation processes within our Solar System is one of the fundamental goals of planetary science research. There has been a revolution in planetary surface observations over the past decade for Mars and the Moon, especially in 3D imaging of surface shape (down to resolutions of 75cm) and subsequent correction for terrain relief of imagery from orbiting and co-registration of lander and rover robotic images. We present some of the recent highlights including 3D modelling of surface shape from the ESA Mars Express HRSC (High Resolution Stereo Camera), see [1], [2] at 30-100m grid-spacing; and then co-registered to HRSC using a resolution cascade of 20m DTMs from NASA MRO stereo-CTX and 0.75m DTMs from MRO stereo-HiRISE [3]. This has opened our eyes to the formation mechanisms of megaflooding events, such as the formation of Iani Vallis and the upstream blocky terrain, to crater lakes and receding valley cuts [4]. A comparable set of products is now available for the Moon from LROC-WA at 100m [5] and LROC-NA at 1m [6]. Recently, a very novel technique for the super-resolution restoration (SRR) of stacks of images has been developed at UCL [7]. First examples shown will be of the entire MER-A Spirit rover traverse taking a stack of 25cm HiRISE to generate a corridor of SRR images along the rover traverse of 5cm imagery of unresolved features such as rocks, created as a consequence of meteoritic bombardment, ridge and valley features. This SRR technique will allow us for ˜400 areas on Mars (where 5 or more HiRISE images have been captured) and similar numbers on the Moon to resolve sub-pixel features. Examples will be shown of how these SRR images can be employed to assist with the better understanding of surface geomorphology. Acknowledgements: The research leading to these results has received funding from the European Union's Seventh Framework Programme (FP7/2007-2013) under PRoViDE grant agreement n° 312377. Partial support is also provided from the STFC 'MSSL Consolidated Grant' ST/K000977/1. References: [1] Gwinner, K., F. et al. (2010) Topography of Mars from global mapping by HRSC high-resolution digital terrain models and orthoimages: characteristics and performance. Earth and Planetary Science Letters 294, 506-519, doi:10.1016/j.epsl.2009.11.007, 2010; [2] Gwinner, K., F. et al. (2015) MarsExpress High Resolution Stereo Camera (HRSC) Multi-orbit Data Products: Methodology, Mapping Concepts and Performance for the first Quadrangle (MC-11E). Geophysical Research Abstracts, Vol. 17, EGU2015-13832; [3] Kim, J., & Muller, J. (2009). Multi-resolution topographic data extraction from Martian stereo imagery. Planetary and Space Science, 57, 2095-2112. doi:10.1016/j.pss.2009.09.024; [4] Warner, N. H., Gupta, S., Kim, J.-R., Muller, J.-P., Le Corre, L., Morley, J., et al. (2011). Constraints on the origin and evolution of Iani Chaos, Mars. Journal of Geophysical Research, 116(E6), E06003. doi:10.1029/2010JE003787; [5] Fok, H. S., Shum, C. K., Yi, Y., Araki, H., Ping, J., Williams, J. G., et al. (2011). Accuracy assessment of lunar topography models. Earth Planets Space, 63, 15-23. doi:10.5047/eps.2010.08.005; [6] Haase, I., Oberst, J., Scholten, F., Wählisch, M., Gläser, P., Karachevtseva, I., & Robinson, M. S. (2012). Mapping the Apollo 17 landing site area based on Lunar Reconnaissance Orbiter Camera images and Apollo surface photography - Haase - 2012 - Journal of Geophysical Research: Planets (1991-2012). Journal of Geophysical Research, 117, E00H20. doi:10.1029/2011JE003908; [7] Tao, Y., Muller, J.-P. (2015) Supporting lander and rover operation: a novel super-resolution restoration technique. Geophysical Research Abstracts, Vol. 17, EGU2015-6925

Mercury anomalies and the timing of biotic recovery following the end-Triassic mass extinction

PubMed Central

Thibodeau, Alyson M.; Ritterbush, Kathleen; Yager, Joyce A.; West, A. Joshua; Ibarra, Yadira; Bottjer, David J.; Berelson, William M.; Bergquist, Bridget A.; Corsetti, Frank A.

2016-01-01

The end-Triassic mass extinction overlapped with the eruption of the Central Atlantic Magmatic Province (CAMP), and release of CO2 and other volcanic volatiles has been implicated in the extinction. However, the timing of marine biotic recovery versus CAMP eruptions remains uncertain. Here we use Hg concentrations and isotopes as indicators of CAMP volcanism in continental shelf sediments, the primary archive of faunal data. In Triassic–Jurassic strata, Muller Canyon, Nevada, Hg levels rise in the extinction interval, peak before the appearance of the first Jurassic ammonite, remain above background in association with a depauperate fauna, and fall to pre-extinction levels during significant pelagic and benthic faunal recovery. Hg isotopes display no significant mass independent fractionation within the extinction and depauperate intervals, consistent with a volcanic origin for the Hg. The Hg and palaeontological evidence from the same archive indicate that significant biotic recovery did not begin until CAMP eruptions ceased. PMID:27048776

Polarimetric imaging of uterine cervix: a case study.

PubMed

Pierangelo, Angelo; Nazac, André; Benali, Abdelali; Validire, Pierre; Cohen, Henri; Novikova, Tatiana; Ibrahim, Bicher Haj; Manhas, Sandeep; Fallet, Clément; Antonelli, Maria-Rosaria; Martino, Antonello-De

2013-06-17

We present a preliminary investigation of macroscopic polarimetric imaging of uterine cervix. Orthogonal state contrast (OSC) images of healthy and anomalous cervices have been taken in vivo at 550 nm. Four ex vivo cervix samples have been studied in full Muller polarimetry, at 550 nm and 700 nm, and characterized in detail by standard pathology. One sample was totally healthy, another one carried CIN lesions at very early stage (CIN1) in its visible exocervical region, while for the other two samples more advanced (CIN3) lesions were present, together with visible glandular epithelium (ectropion). Significant birefringence has been observed in the healthy regions of all six samples, both in vivo and ex vivo. Standard treatments of the Mueller images of the ex vivo samples allowed to quantify both retardation and depolarization. Retardation reached 60° in healthy regions, and disappeared in the anomalous regions of the other three ex vivo samples. The depolarization power was largest in healthy regions, and lower in CINs and ectropion. Possible origins of the observed effects are briefly discussed.

Distillation with Sublogarithmic Overhead.

PubMed

Hastings, Matthew B; Haah, Jeongwan

2018-02-02

It has been conjectured that, for any distillation protocol for magic states for the T gate, the number of noisy input magic states required per output magic state at output error rate ε is Ω[log(1/ε)]. We show that this conjecture is false. We find a family of quantum error correcting codes of parameters ⟦∑[under i=w+1][over m](m/i),∑[under i=0][over w](m/i),∑[under i=w+1][over r+1](r+1/i)⟧ for any integers m>2r, r>w≥0, by puncturing quantum Reed-Muller codes. When m>νr, our code admits a transversal logical gate at the νth level of Clifford hierarchy. In a distillation protocol for magic states at the level ν=3 (T gate), the ratio of input to output magic states is O(log^{γ}(1/ε)), where γ=log(n/k)/log(d)<0.678 for some m, r, w. The smallest code in our family for which γ<1 is on ≈2^{58} qubits.

Nurse exposure doses resulted from bone scintigraphy patient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tunçman, Duygu, E-mail: duygutuncman@gmail.com; Demir, Bayram; Kovan, Bilal

Bone scintigraphy is used for displaying the radiologic undiagnosed bone lesions in nuclear medicine. It’s general indications are researching bone metastases, detection of radiographically occult fractures, staging and follow-up in primary bone tumors, diagnosis of paget’s disease, investigation of loosening and infection in orthopedic implants. It is applied with using {sup 99m}Tc labeled radiopharmaceuticals (e.g {sup 99m} Tc MDP,{sup 99m}Tc HEDP and {sup 99m}Tc HMDP). 20 -25 mCi IV radiotracer was injected into vein and radiotracer emits gamma radiation. Patient waits in isolated room for about 3 hours then a gamma camera scans radiation area and creates an image. Whenmore » some patient’s situation is not good, patients are hospitalized until the scanning because of patients’ close contact care need. In this study, measurements were taken from ten patients using Geiger Muller counter. After these measurements, we calculated nurse’s exposure radiations from patient’s routine treatment, examination and emergency station.« less

Teaching Physics to Future Presidents

NASA Astrophysics Data System (ADS)

Jacobsen, Bob

2015-03-01

We present Berkeley's ``Physics for Future Presidents'' course. Created by Prof. Richard Muller, this is an introductory course aimed at preparing our students to make decisions in a physical, technological world. Organized around large topical areas like ``Energy,'' ``Gravity and Force,'' ``Nuclei and Radioactivity,'' and ``Invisible Light,'' we can cover in some depth the scientific issues involved in large-scale energy production via renewable and non-renewable resources, satellites including capabilities and limitations, nuclear power production including risk and waste, UV exposure including discussion of the ozone layer and cancer risk, etc. Although only a small bit of algebra is used, it's a deeply quantitative course. The class is structured around (1) traditional text readings and homework for basic material (2) demo- and discussion-based lectures and (3) readings and essays based on current articles and events. This third component raises student engagement and improves their reasoning & skeptical skills. It also makes the course challenging for both STEM and non-STEM students, and for future teachers.

Study the friction behaviour of poly[2-(dimethylamino)ethyl methacrylate] brush with AFM probes in contact mechanics

NASA Astrophysics Data System (ADS)

Raftari, Maryam; Zhang, Zhenyu; Leggett, Graham J.; Geoghegan, Mark

2011-10-01

We have studied the frictional behaviour of grafted poly[2-(dimethylamino)ethyl methacrylate] (PDMAEMA) films using friction force microscopy (FFM). The films were prepared on native oxide-terminated silicon substrates using the technique of atom transfer radical polymerization (ATRP). We show that single asperity contact mechanics (Johnson-Kendall-Roberts(JKR) and Derjaguin-Muller-Toporov(DMT)) as well as a linear (Amontons) relation between applied load and frictional load depending on the pH of the FFM probe. Measurements were made using functionalized and unfunctionalized silicon nitride triangular probes. Functionalized probes included gold-coated probes, and ones coated with a self-assembled monolayer of dodecanethiol (DDT). The frictional behaviour between PDMAEMA and all tips immersed in pH from 3 to 11 are corresponded to the DMT or JKR model and are linear in pH=1, 2, and 12. These results show that contact mechanics of polyelectrolytes in water is complex and strongly dependent on the environmental pH.

Multiple component codes based generalized LDPC codes for high-speed optical transport.

PubMed

Djordjevic, Ivan B; Wang, Ting

2014-07-14

A class of generalized low-density parity-check (GLDPC) codes suitable for optical communications is proposed, which consists of multiple local codes. It is shown that Hamming, BCH, and Reed-Muller codes can be used as local codes, and that the maximum a posteriori probability (MAP) decoding of these local codes by Ashikhmin-Lytsin algorithm is feasible in terms of complexity and performance. We demonstrate that record coding gains can be obtained from properly designed GLDPC codes, derived from multiple component codes. We then show that several recently proposed classes of LDPC codes such as convolutional and spatially-coupled codes can be described using the concept of GLDPC coding, which indicates that the GLDPC coding can be used as a unified platform for advanced FEC enabling ultra-high speed optical transport. The proposed class of GLDPC codes is also suitable for code-rate adaption, to adjust the error correction strength depending on the optical channel conditions.

Decision Making in the Management of Extracapsular Fractures of the Proximal Femur - is the Dynamic Hip Screw the Prevailing Gold Standard?

PubMed

Jacob, Joshua; Desai, Ankit; Trompeter, Alex

2017-01-01

Currently, approximately half of all hip fractures are extracapsular, with an incidence as high as 50 in 100,000 in some countries. The common classification systems fail to explain the logistics of fracture classification and whether they all behave in the same manner. The Muller AO classification system is a useful platform to delineate stable and unstable fractures. The Dynamic hip screw (DHS) however, has remained the 'gold standard' implant of choice for application in all extracapsular fractures. The DHS relies on the integrity and strength of the lateral femoral wall as well as the postero-medial fragment. An analysis of several studies indicates significant improvements in design and techniques to ensure a better outcome with intramedullary nails. This article reviews the historical trends that helped to evolve the DHS implant as well as discussing if the surgeon should remain content with this implant. We suggest that the gold standard surgical management of extracapsular fractures can, and should, evolve.

Highlights from SelectBio 2015: Academic Drug Discovery Conference, Cambridge, UK, 19-20 May 2015.

PubMed

Spencer, John; Coaker, Hannah

2015-01-01

The SelectBio 2015: Academic Drug Discovery Conference was held in Cambridge, UK, on 19-20 May 2015. Building on the success of academic drug discovery events in the USA, this conference aimed to showcase the exciting new research emerging from academic drug discovery and to help bridge the gap between basic research and commercial application. At the event the authors heard from a number of speakers on a broad array of topics, from partnering models for academia and industry to novel drug discovery approaches across various therapeutic areas, with a few talks, such as those by Susanne Muller-Knapp (Structure Genomics Consortium, Oxford University, Oxford, UK) and Julian Blagg (Institute of Cancer Research, UK), covering both remits, by highlighting a number of such partnerships and then delving into some case studies. The conference concluded with a heated debate on whether phenotypic discovery should be favored over targeted discovery in academia and pharma, in a panel discussion chaired by Roland Wolkowicz (San Diego State University, USA).

Divergent sorting of a balanced ancestral polymorphism underlies the establishment of gene-flow barriers in Capsella

PubMed Central

Sicard, Adrien; Kappel, Christian; Josephs, Emily B.; Lee, Young Wha; Marona, Cindy; Stinchcombe, John R.; Wright, Stephen I.; Lenhard, Michael

2015-01-01

In the Bateson–Dobzhansky–Muller model of genetic incompatibilities post-zygotic gene-flow barriers arise by fixation of novel alleles at interacting loci in separated populations. Many such incompatibilities are polymorphic in plants, implying an important role for genetic drift or balancing selection in their origin and evolution. Here we show that NPR1 and RPP5 loci cause a genetic incompatibility between the incipient species Capsella grandiflora and C. rubella, and the more distantly related C. rubella and C. orientalis. The incompatible RPP5 allele results from a mutation in C. rubella, while the incompatible NPR1 allele is frequent in the ancestral C. grandiflora. Compatible and incompatible NPR1 haplotypes are maintained by balancing selection in C. grandiflora, and were divergently sorted into the derived C. rubella and C. orientalis. Thus, by maintaining differentiated alleles at high frequencies, balancing selection on ancestral polymorphisms can facilitate establishing gene-flow barriers between derived populations through lineage sorting of the alternative alleles. PMID:26268845

Design and implementation of an optical Gaussian noise generator

NASA Astrophysics Data System (ADS)

Za~O, Leonardo; Loss, Gustavo; Coelho, Rosângela

2009-08-01

A design of a fast and accurate optical Gaussian noise generator is proposed and demonstrated. The noise sample generation is based on the Box-Muller algorithm. The functions implementation was performed on a high-speed Altera Stratix EP1S25 field-programmable gate array (FPGA) development kit. It enabled the generation of 150 million 16-bit noise samples per second. The Gaussian noise generator required only 7.4% of the FPGA logic elements, 1.2% of the RAM memory, 0.04% of the ROM memory, and a laser source. The optical pulses were generated by a laser source externally modulated by the data bit samples using the frequency-shift keying technique. The accuracy of the noise samples was evaluated for different sequences size and confidence intervals. The noise sample pattern was validated by the Bhattacharyya distance (Bd) and the autocorrelation function. The results showed that the proposed design of the optical Gaussian noise generator is very promising to evaluate the performance of optical communications channels with very low bit-error-rate values.

Designer antibacterial peptides kill fluoroquinolone-resistant clinical isolates.

PubMed

Otvos, Laszlo; Wade, John D; Lin, Feng; Condie, Barry A; Hanrieder, Joerg; Hoffmann, Ralf

2005-08-11

A significant number of Escherichia coli and Klebsiella pneumoniae bacterial strains in urinary tract infections are resistant to fluoroquinolones. Peptide antibiotics are viable alternatives although these are usually either toxic or insufficiently active. By applying multiple alignment and sequence optimization steps, we designed multifunctional proline-rich antibacterial peptides that maintained their DnaK-binding ability in bacteria and low toxicity in eukaryotes, but entered bacterial cells much more avidly than earlier peptide derivatives. The resulting chimeric and statistical analogues exhibited 8-32 microg/mL minimal inhibitory concentration efficacies in Muller-Hinton broth against a series of clinical pathogens. Significantly, the best peptide, compound 5, A3-APO, retained full antibacterial activity in the presence of mouse serum. Across a set of eight fluoroquinolone-resistant clinical isolates, peptide 5 was 4 times more potent than ciprofloxacin. On the basis of the in vitro efficacy, toxicity, and pharmacokinetics data, we estimate that peptide 5 will be suitable for treating infections in the 3-5 mg/kg dose range.

Cellular and dendritic growth in a binary melt - A marginal stability approach

NASA Technical Reports Server (NTRS)

Laxmanan, V.

1986-01-01

A simple model for the constrained growth of an array of cells or dendrites in a binary alloy in the presence of an imposed positive temperature gradient in the liquid is proposed, with the dendritic or cell tip radius calculated using the marginal stability criterion of Langer and Muller-Krumbhaar (1977). This approach, an approach adopting the ad hoc assumption of minimum undercooling at the cell or dendrite tip, and an approach based on the stability criterion of Trivedi (1980) all predict tip radii to within 30 percent of each other, and yield a simple relationship between the tip radius and the growth conditions. Good agreement is found between predictions and data obtained in a succinonitrile-acetone system, and under the present experimental conditions, the dendritic tip stability parameter value is found to be twice that obtained previously, possibly due to a transition in morphology from a cellular structure with just a few side branches, to a more fully developed dendritic structure.

A test method for determining adhesion forces and Hamaker constants of cementitious materials using atomic force microscopy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lomboy, Gilson; Sundararajan, Sriram, E-mail: srirams@iastate.edu; Wang Kejin

2011-11-15

A method for determining Hamaker constant of cementitious materials is presented. The method involved sample preparation, measurement of adhesion force between the tested material and a silicon nitride probe using atomic force microscopy in dry air and in water, and calculating the Hamaker constant using appropriate contact mechanics models. The work of adhesion and Hamaker constant were computed from the pull-off forces using the Johnson-Kendall-Roberts and Derjagin-Muller-Toropov models. Reference materials with known Hamaker constants (mica, silica, calcite) and commercially available cementitious materials (Portland cement (PC), ground granulated blast furnace slag (GGBFS)) were studied. The Hamaker constants of the reference materialsmore » obtained are consistent with those published by previous researchers. The results indicate that PC has a higher Hamaker constant than GGBFS. The Hamaker constant of PC in water is close to the previously predicted value C{sub 3}S, which is attributed to short hydration time ({<=} 45 min) used in this study.« less

Bioaccumulation and biotransformation of arsenic compounds in Hediste diversicolor (Muller 1776) after exposure to spiked sediments.

PubMed

Gaion, Andrea; Sartori, Davide; Scuderi, Alice; Fattorini, Daniele

2014-05-01

This study focused on the exposure of the common ragworm Hediste diversicolor (Müller 1776) to sediments enriched with different arsenic compounds, namely arsenate, dimethyl-arsinate, and arsenobetaine. Speciation analysis was carried out on both the spiked sediments and the exposed polychaetes in order to investigate H. diversicolor capability of arsenic bioaccumulation and biotransformation. Two levels of contamination (acute and moderate dose) were chosen for enriched sediments to investigate possible differences in the arsenic bioaccumulation patterns. The highest value of arsenic in tissues was reached after 15 days of exposure to dimethyl-arsinate (acute dose) spiked sediment (1,172 ± 176 μg/g). A significant increase was also obtained in worms exposed both to arsenate and arsenobetaine. Speciation analysis showed that trimethyl-arsine oxide was the predominant chemical form in tissues of H. diversicolor exposed to all the spiked sediments, confirming the importance of this intermediate in biological transformation of arsenic.

Operational level for unconditional release of contaminated property from affected areas around Fukushima Daiichi nuclear power plant

PubMed Central

Ogino, Haruyuki; Hattori, Takatoshi

2013-01-01

This paper focuses on the surface contamination control of slightly contaminated property after the Fukushima nuclear accident. The operational level for the unconditional release of contaminated properties is calculated in counts per minute (cpm) to enable the use of a typical Geiger-Muller (GM) survey meter with a 50-mm bore, on the basis of the surficial clearance level of 10 Bq cm−2 for 134Cs and 137Cs derived in the previous studies of the authors. By applying a factor for the conversion of the unit surface contamination to the count rate of a survey meter widely used after the Fukushima accident, the operational level for the unconditional release of contaminated properties was calculated to be 2300 cpm on average and 23 000 cpm at the highest-contamination part. The calculated numerical values of the operational levels are effective as long as the typical GM survey meter is used in the radiation measurement. PMID:23778575

EU-FP7-iMARS: analysis of Mars multi-resolution images using auto-coregistration, data mining and crowd source techniques: A Status Report

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter; Sidiropoulos, Panagiotis; Tao, Yu; Gwinner, Klaus; Willner, Konrad; Fanara, Lida; Waehlisch, Marita; Walter, Sebastian; Schreiner, Bjoern; Steikert, Ralf; Ivanov, Anton B.; Cantini, Federico; Wardlaw, Jessica; Sprinks, James Christopher; Giordano, Michele; Kim, Jungrack; Houghton, Robert; Bamford, Steven

2016-10-01

There has been a revolution in 3D surface imaging of Mars over the last 12 years with systematic stereoscopy from HRSC and the production for almost 50% of the Martian surface of DTMs and ORIs. The iMars project has been exploiting this unique set of 3D products as a basemap to co-register NASA imagery going back to the 1970s. DLR have produced 3D HRSC mosaic products for large regions with c. 100 individual strips/region (MC-11E/W). UCL have developed an automated processing chain for CTX and HiRISE 3D processing to densify this global HRSC dataset with DTMs down to 18m and 75cm respectively [1]. A fully Automated Co-Registration and Orthorectification (ACRO) system has been developed at UCL and applied to the production of around 8,000 images co-registered to a HRSC pixel (typically 12.5m) and orthorectified to HRSC DTMs of 50-150m spacing [2]. These images are viewable through an OGC-compliant webGIS developed at FUB including tools for viewing sequences over the same area [3]. Corresponding MARSIS and SHARAD data can be viewed through the QGIS plugin available [4]. An automated data mining system is being developed at UCL [5] for change detection to search and classify features in images going back to Viking Orbiter of IFoV ≤100m. In parallel, a citizen science project at Nottingham University [6] is defining training samples for classification of change features and eventually for verification of change [7]. Scientific applications include change mapping over the SPRC [8], mass movements near the North Pole [9]; dark streaks [10] CRISM mapping of mineralogy of dust in the SPRC "Swiss cheese" layers [11] and mapping of dune movement [12]. [1] Tao, Y. & J.-P. Muller LPSC16-2074; [2] Gwinner, K. et al. EPSC15-672; [3] van Gasselt, S. et al. EPSC14-693; [4] Ivanov, A. & Cantini, F. EPSC16; [5] Sidiropoulos, P. & J.-P. Muller EPSC16; [6] Sprinks et al. EPSC16; [7] Wardlaw et al. EPSC16; [8] Putri et al., EPSC16;[9] Fanara, L. et al. EPSC 16; [10] Schreiner, B. et al., EPSC16; [11] Campbell, J.et al., EPSC16;[12] Kim, J-R., et al., EPSC16 AcknowledgementsThis research has received funding from the EU's FP7 Programme under iMars 607379. Partial support is also provided from the STFC Grant ST/K000977/1

Circuit Design Approaches for Implementation of a Subtrellis IC for a Reed-Muller Subcode

NASA Technical Reports Server (NTRS)

Lin, Shu; Uehara, Gregory T.; Nakamura, Eric B.; Chu, Cecilia W. P.

1996-01-01

In his research, we have proposed the (64, 40, 8) subcode of the third-order Reed-Muller (RM) code to NASA for high-speed satellite communications. This RM subcode can be used either alone or as an inner code of a concatenated coding system with the NASA standard (255, 233, 33) Reed-Solomon (RS) code as the outer code to achieve high performance (or low bit-error rate) with reduced decoding complexity. It can also be used as a component code in a multilevel bandwidth efficient coded modulation system to achieve reliable bandwidth efficient data transmission. This report will summarize the key progress we have made toward achieving our eventual goal of implementing a decoder system based upon this code. In the first phase of study, we investigated the complexities of various sectionalized trellis diagrams for the proposed (64, 40, 8) RM subcode. We found a specific 8-trellis diagram for this code which requires the least decoding complexity with a high possibility of achieving a decoding speed of 600 M bits per second(Mbps). The combination of a large number of states and a high data rate will be made possible due to the utilization of a high degree of parallelism throughout the architecture. This trellis diagram will be presented and briefly described. In the second phase of study which was carried out through the past year, we investigated circuit architectures to determine the feasibility of VLSI implementation of a high- speed Viterbi decoder based on this 8-section trellis diagram. We began to examine specific design and implementation approaches to implement a fully custom integrated circuit (IC) which will be a key building block for a decoder system implementation. The key results will be presented in this report. This report will be divided into three primary sections. First, we will briefly describe the system block diagram in which the proposed decoder is assumed to be operating and present some of the key architectural approaches being used to implement the system at high speed. Second, we will describe details of the 8-trellis diagram we found to best meet the trade-offs between chip and overall system complexity. The chosen approach implements the trellis for the (64, 40, 8) RM subcode with 32 independent sub-trellises. And third, we will describe results of our feasibility study on the implementation of such an IC chip in CMOS technology to implement one of these subtrellises.

Circuit Design Approaches for Implementation of a Subtrellis IC for a Reed-Muller Subcode

NASA Technical Reports Server (NTRS)

Lin, Shu; Uehara, Gregory T.; Nakamura, Eric B.; Chu, Cecilia W. P.

1996-01-01

In this research, we have proposed the (64, 40, 8) subcode of the third-order Reed-Muller (RM) code to NASA for high-speed satellite communications. This RM subcode can be used either alone or as an inner code of a concatenated coding system with the NASA standard (255, 233, 33) Reed-Solomon (RS) code as the outer code to achieve high performance (or low bit-error rate) with reduced decoding complexity. It can also be used as a component code in a multilevel bandwidth efficient coded modulation system to achieve reliable bandwidth efficient data transmission. This report will summarize the key progress we have made toward achieving our eventual goal of implementing a decoder system based upon this code. In the first phase of study, we investigated the complexities of various sectionalized trellis diagrams for the proposed (64, 40, 8) RM subcode. We found a specific 8-trellis diagram for this code which requires the least decoding complexity with a high possibility of achieving a decoding speed of 600 M bits per second (Mbps). The combination of a large number of states and a high data rate will be made possible due to the utilization of a high degree of parallelism throughout the architecture. This trellis diagram will be presented and briefly described. In the second phase of study which was carried out through the past year, we investigated circuit architectures to determine the feasibility of VLSI implementation of a high-speed Viterbi decoder based on this 8-section trellis diagram. We began to examine specific design and implementation approaches to implement a fully custom integrated circuit (IC) which will be a key building block for a decoder system implementation. The key results will be presented in this report. This report will be divided into three primary sections. First, we will briefly describe the system block diagram in which the proposed decoder is assumed to be operating and present some of the key architectural approaches being used to implement the system at high speed. Second, we will describe details of the 8-trellis diagram we found to best meet the trade-offs between chip and overall system complexity. The chosen approach implements the trellis for the (64, 40, 8) RM subcode with 32 independent sub-trellises. And third, we will describe results of our feasibility study on the implementation of such an IC chip in CMOS technology to implement one of these subtrellises.

High-Speed Soft-Decision Decoding of Two Reed-Muller Codes

NASA Technical Reports Server (NTRS)

Lin, Shu; Uehara, Gregory T.

1996-01-01

In his research, we have proposed the (64, 40, 8) subcode of the third-order Reed-Muller (RM) code to NASA for high-speed satellite communications. This RM subcode can be used either alone or as an inner code of a concatenated coding system with the NASA standard (255, 233, 33) Reed-Solomon (RS) code as the outer code to achieve high performance (or low bit-error rate) with reduced decoding complexity. It can also be used as a component code in a multilevel bandwidth efficient coded modulation system to achieve reliable bandwidth efficient data transmission. This report will summarize the key progress we have made toward achieving our eventual goal of implementing a decoder system based upon this code. In the first phase of study, we investigated the complexities of various sectionalized trellis diagrams for the proposed (64, 40, 8) RNI subcode. We found a specific 8-trellis diagram for this code which requires the least decoding complexity with a high possibility of achieving a decoding speed of 600 M bits per second (Mbps). The combination of a large number of states and a hi ch data rate will be made possible due to the utilization of a high degree of parallelism throughout the architecture. This trellis diagram will be presented and briefly described. In the second phase of study which was carried out through the past year, we investigated circuit architectures to determine the feasibility of VLSI implementation of a high-speed Viterbi decoder based on this 8-section trellis diagram. We began to examine specific design and implementation approaches to implement a fully custom integrated circuit (IC) which will be a key building block for a decoder system implementation. The key results will be presented in this report. This report will be divided into three primary sections. First, we will briefly describe the system block diagram in which the proposed decoder is assumed to be operating and present some of the key architectural approaches being used to implement the system at high speed. Second, we will describe details of the 8-trellis diagram we found to best meet the trade-offs between chip and overall system complexity. The chosen approach implements the trellis for the (64, 40, 8) RM subcode with 32 independent sub-trellises. And third, we will describe results of our feasibility study on the implementation of such an IC chip in CMOS technology to implement one of these sub-trellises.

High-Speed Soft-Decision Decoding of Two Reed-Muller Codes

NASA Technical Reports Server (NTRS)

Lin, Shu; Uehara, Gregory T.

1996-01-01

In this research, we have proposed the (64, 40, 8) subcode of the third-order Reed-Muller (RM) code to NASA for high-speed satellite communications. This RM subcode can be used either alone or as an inner code of a concatenated coding system with the NASA standard (255, 233, 33) Reed-Solomon (RS) code as the outer code to achieve high performance (or low bit-error rate) with reduced decoding complexity. It can also be used as a component code in a multilevel bandwidth efficient coded modulation system to achieve reliable bandwidth efficient data transmission. This report will summarize the key progress we have made toward achieving our eventual goal of implementing, a decoder system based upon this code. In the first phase of study, we investigated the complexities of various sectionalized trellis diagrams for the proposed (64, 40, 8) RM subcode. We found a specific 8-trellis diagram for this code which requires the least decoding complexity with a high possibility of achieving a decoding speed of 600 M bits per second (Mbps). The combination of a large number of states and a high data rate will be made possible due to the utilization of a high degree of parallelism throughout the architecture. This trellis diagram will be presented and briefly described. In the second phase of study, which was carried out through the past year, we investigated circuit architectures to determine the feasibility of VLSI implementation of a high-speed Viterbi decoder based on this 8-section trellis diagram. We began to examine specific design and implementation approaches to implement a fully custom integrated circuit (IC) which will be a key building block for a decoder system implementation. The key results will be presented in this report. This report will be divided into three primary sections. First, we will briefly describe the system block diagram in which the proposed decoder is assumed to be operating, and present some of the key architectural approaches being used to implement the system at high speed. Second, we will describe details of the 8-trellis diagram we found to best meet the trade-offs between chip and overall system complexity. The chosen approach implements the trellis for the (64, 40, 8) RM subcode with 32 independent sub-trellises. And third, we will describe results of our feasibility study on the implementation of such an IC chip in CMOS technology to implement one of these sub-trellises.

Thickness and composition of ultrathin SiO2 layers on Si

NASA Astrophysics Data System (ADS)

van der Marel, C.; Verheijen, M. A.; Tamminga, Y.; Pijnenburg, R. H. W.; Tombros, N.; Cubaynes, F.

2004-07-01

Ultrathin SiO2 layers are of importance for the semiconductor industry. One of the techniques that can be used to determine the chemical composition and thickness of this type of layers is x-ray photoelectron spectroscopy (XPS). As shown by Seah and Spencer [Surf. Interface Anal. 33, 640 (2002)], it is not trivial to characterize this type of layer by means of XPS in a reliable way. We have investigated a series of ultrathin layers of SiO2 on Si (in the range from 0.3 to 3 nm) using XPS. The samples were also analyzed by means of transmission electron microscopy (TEM), Rutherford backscattering (RBS), and ellipsometry. The thickness of the SiO2 layers (d) was determined from the XPS results using three different approaches: the ``standard'' equation (Seah and Spencer) for d, an overlayer-substrate model calculation, and the QUASES-Tougaard [Surf. Interface Anal. 26, 249 (1998), QUASES-Tougaard: Software package for Quantitative Analysis of Surfaces by Electron Spectroscopy, version 4.4 (2000); http://www.quases.com] method. Good agreement was obtained between the results of XPS analyses using the ``standard'' equation, the overlayer-substrate model calculation, and RBS results. The QUASES-Tougaard results were approximately 62% above the other XPS results. The optical values for the thickness were always slightly higher than the thickness according to XPS or RBS. Using the model calculation, these (relatively small) deviations from the optical results could be explained as being a consequence of surface contaminations with hydrocarbons. For a thickness above 2.5 nm, the TEM results were in good agreement with the results obtained from the other techniques (apart from QUASES-Tougaard). Below 2.5 nm, significant deviations were found between RBS, XPS, and optical data on the one hand and TEM results on the other hand; the deviations became larger as the thickness of the SiO2 decreased. This effect may be related to interface states of oxygen, which have been investigated [D. A. Muller, T. Sorsch, S. Moccio, F. H. Baumann, K. Evans-Lutterodt, and G. Timp, Nature (London) 399, 758 (1999); D. A. Muller and J. B. Neaton, Structure and Energetics of the Interface Between Si and Amorphous SiO2 in Fundamental Aspects of Silicon Oxidation, edited by Y. J. Chabal (Springer, Berlin, 2001), pp. 219-246.] by means of high-resolution electron energy loss spectroscopy measurements of the O K edge in ultrathin gate oxides of SiO2. .

Cavity Ringdown Spectroscopy and Kinetics of HO_2+HCHO: Detection of the ν_1 and {A}- {X} Bands of HOCH_2OOCAVITY Ringdown Spectroscopy and Kinetics of HO_2+HCHO: Detection of the ν_1 and {A}- {X} Bands of HOCH_2OO

NASA Astrophysics Data System (ADS)

Sprague, Matthew K.; Okumura, Mitchio; Sander, Stanley P.

2011-06-01

The reactions of HO_2 with carbonyl compounds are believed to be a sink for carbonyl compounds in the upper troposphere and lower stratosphere. These reactions proceed through a hydrogen bound intermediate before isomerizing. The reaction of HO_2 + formaldehyde (HCHO) serves as a prototype for this class of reactions, forming the isomerization product hydroxymethylperoxy (HOCH_2OO, HMP). Previous studies measured the spectrum and kinetics of HMP using either FTIR detection of the end products or direct detection of HMP by the unstructured tilde{B}-tilde{X} transition. Despite these studies, considerable uncertainty exists in the rate constant of HMP formation (±80%, 2σ). In this talk, we report the first detection of the ν_1 (OH stretch) and tilde{A}-tilde{X} electronic spectra of the HMP radical. The OH stretch spectrum is broad and featureless, while the tilde{A}(0)-tilde{X}(0) origin and combination band with the OOCO torsion tilde{A}(NOOCO=1)-tilde{X}(0) are rotationally resolved. Quantum chemistry calculations have been performed on both the tilde{A} and tilde{X} states as a function of the OOCO and HOCO dihedral angles to estimate the tilde{A}-tilde{X} transition frequency and to assess the coupling between the two torsional modes. We also present kinetics data showing the rates of production and destruction of HMP. I. Hermans, J. F. Muller, T. L. Nguyen, P. A. Jacobs, and J. Peeters. J. Phys. Chem. A 2005, 109, 4303. F. Su, J. G. Calvert, and J. H. Shaw J. Phys. Chem. 1979, 83, 3185. B. Veyret, R. Lesclaux, M. T. Rayez, J. C. Rayez, R. A. Cox, and G. K. Moortgat J. Phys. Chem. 1989, 93, 2368. J. P. Burrows, G. K. Moortgat, G. S. Tyndall, R. A. Cox, M. E. Jenkin, G. D. Hayman, and B. Veyret J. Phys. Chem. 1989, 93, 2375 S. P. Sander, B. J. Finlayson-Pitts, D. M. Golden, R. E. Huie, C. E. Kolb, M. J. Kurylo, M. J. Molina, et al. Chemical Kinetics and Photochemical Data for Use in Atmospheric Studies, Evaluation Number 16, Jet Propulsion Laboratory, 2009 I. Hermans, J. F. Muller, T. L. Nguyen, P. A. Jacobs, and J. Peeters. J. Phys. Chem. A 2005, 109, 4303.

Pereskia aculeata Muller (Cactaceae) Leaves: Chemical Composition and Biological Activities

PubMed Central

Souza, Lucèia Fàtima; Caputo, Lucia; Inchausti De Barros, Ingrid Bergman; Fratianni, Florinda; Nazzaro, Filomena; De Feo, Vincenzo

2016-01-01

The aims of this work were to study the chemical composition of the essential oil from the leaves of Pereskia aculeata and to evaluate some biological activities of three leaf extracts. The phenolic content, antioxidant activity, and in vitro antimicrobial and antifungal activities were determined. The methanol extract showed antioxidant activity (EC50 7.09 mg/mL) and high polyphenols content (15.04 ± 0.31 mg gallic acid equivalents (GAE)/g). The petroleum ether extract exhibited potent antibacterial activity against Escherichia coli, whereas the chloroform extract showed inhibitory activity against Bacillus cereus and Staphylococcus aureus. The petroleum ether and methanol extracts were more effective in inhibiting the growth of Aspergillus versicolor. The possible cytotoxicity of extracts on neuroblastoma SH-SY5Y cancer cell line and the influence on adenylate cyclase (ADCY) expression was also studied. P. aculeata chloroform extract showed antiproliferative activity with an IC50 value of 262.83 µg/mL. Treatments of SH-SY5Y neuroblastoma cells with 100 µg/mL of methanol extract significantly reduced ADCY1 expression. PMID:27598154

Radioactivity in fossils at the Hagerman Fossil Beds National Monument.

PubMed

Farmer, C Neal; Kathren, Ronald L; Christensen, Craig

2008-08-01

Since 1996, higher than background levels of naturally occurring radioactivity have been documented in both fossil and mineral deposits at Hagerman Fossil Beds National Monument in south-central Idaho. Radioactive fossil sites occur primarily within an elevation zone of 900-1000 m above sea level and are most commonly found associated with ancient river channels filled with sand. Fossils found in clay rich deposits do not exhibit discernable levels of radioactivity. Out of 300 randomly selected fossils, approximately three-fourths exhibit detectable levels of natural radioactivity ranging from 1 to 2 orders of magnitude above ambient background levels when surveyed with a portable hand held Geiger-Muller survey instrument. Mineral deposits in geologic strata also show above ambient background levels of radioactivity. Radiochemical lab analysis has documented the presence of numerous natural radioactive isotopes. It is postulated that ancient groundwater transported radioactive elements through sand bodies containing fossils which precipitated out of solution during the fossilization process. The elevated levels of natural radioactivity in fossils may require special precautions to ensure that exposures to personnel from stored or displayed items are kept as low as reasonably achievable (ALARA).

Chemistry and superconductivity in thallium-based cuprates. Technical report No. 56, 1 June 1989-30 May 1990

DOE Office of Scientific and Technical Information (OSTI.GOV)

Greenblatt, M.; Li, S.; McMills, L.E.

1990-06-01

Following the discoveries of high temperature superconductivity in the rare-earth copper oxide systems at 40K bY Bednorz and Muller in 1986 and at 90K by other researchers in 1987, Sheng and Hermann, in 1988, discovered superconductivity in the thallium-alkaline-earth copper oxide systems with critical temperatures as high as 120K. All of the Tl-based compounds can be described by the general formula, TlmA2Can-1CuO2n+m+2, where m=1 or 2; n=5; A=Ba, Sr. For convenience, the names of these compounds are abbreviated as 2223 for TlBa2Ca2Cu3O10, where each number denotes the number of Tl, Ba(Sr), Ca and Cu ions per formula, respectively. The compoundsmore » with m=1 and m=2 are usually referred to as single and double T1-O layered compounds, respectively. The highest superconducting transition temperature known so far was found in Tl2BaCa2Cu3O10 at 125K.« less

A high definition Mueller polarimetric endoscope for tissue characterisation (Conference Presentation)

NASA Astrophysics Data System (ADS)

Qi, Ji; Elson, Daniel

2016-03-01

The mechanism of most medical endoscopes is based on the interaction between light and biological tissue, inclusive of absorption, elastic scattering and fluorescence. In essence, the metrics of those interactions are obtained from the fundamental properties of light as an electro-magnetic waves, namely, the radiation intensity and wavelength. As another fundamental property of light, polarisation can not only reveal tissue scattering and absorption information from a different perspective, but is also able to provide a fresh insight into directional tissue birefringence properties induced by birefringent compositions and anisotropic fibrous structures, such as collagen, elastin, muscle fibre, etc at the same time. Here we demonstrate a low cost high definition Muller polarimetric endoscope with minimal alteration of a rigid endoscope. By imaging birefringent tissue mimicking phantoms and a porcine bladder, we show that this novel endoscopic imaging modality is able to provide different information of interest from unpolarised endoscopic imaging, including linear depolarization, circular depolarization, birefringence, optic axis orientation and dichroism. This endoscope can potentially be employed for better tissue visualisation and benefit endoscopic investigations and intra-operative guidance.

A little bit of sex matters for genome evolution in asexual plants.

PubMed

Hojsgaard, Diego; Hörandl, Elvira

2015-01-01

Genome evolution in asexual organisms is theoretically expected to be shaped by various factors: first, hybrid origin, and polyploidy confer a genomic constitution of highly heterozygous genotypes with multiple copies of genes; second, asexuality confers a lack of recombination and variation in populations, which reduces the efficiency of selection against deleterious mutations; hence, the accumulation of mutations and a gradual increase in mutational load (Muller's ratchet) would lead to rapid extinction of asexual lineages; third, allelic sequence divergence is expected to result in rapid divergence of lineages (Meselson effect). Recent transcriptome studies on the asexual polyploid complex Ranunculus auricomus using single-nucleotide polymorphisms confirmed neutral allelic sequence divergence within a short time frame, but rejected a hypothesis of a genome-wide accumulation of mutations in asexuals compared to sexuals, except for a few genes related to reproductive development. We discuss a general model that the observed incidence of facultative sexuality in plants may unmask deleterious mutations with partial dominance and expose them efficiently to purging selection. A little bit of sex may help to avoid genomic decay and extinction.

Photochemical Water Oxidation Using {PMo12O40@Mo72Fe30}n Based Soft Oxometalate

NASA Astrophysics Data System (ADS)

Das, Santu; Roy, Soumyajit

Finding an alternative energy resource which can produce clean energy at a low cost is one of the major concerns of our times. The conversion of light energy into chemical energy is one key step forward in the direction. With that end in view photochemical water oxidation to produce oxygen plays a crucial role. In the present paper we have synthesized a soft oxometalate {PMo12O40@Mo72Fe30}n(1) from its well-known precursor polyoxometalate constituent [Muller et al., Chem. Commun. 1, 657 (2001)]. It is known that in the matter of catalysis, high surface area, possibility of heterogenization, recoverability makes soft oxometalates (SOMs) attractive as catalytic materials. Here we exploit such advantages of SOMs. The SOM based material acts as an active catalyst for photochemical water oxidation reaction with a maximum turnover number of 20256 and turnover frequency of 24.11min-1. The catalyst material is stable under photochemical reaction conditions and therefore can be reused for multiple photo catalytic water oxidation reaction cycles.

High-field specific heats of A15 V3Si and Nb3Sn

NASA Astrophysics Data System (ADS)

Stewart, G. R.; Brandt, B. L.

1984-04-01

In order to further understand the anomalous behavior of the specific heat of Nb3Sn in an 18-T magnetic field discovered by Stewart, Cort, and Webb

Pereskia aculeata Muller (Cactaceae) Leaves: Chemical Composition and Biological Activities.

PubMed

Souza, Lucèia Fàtima; Caputo, Lucia; Inchausti De Barros, Ingrid Bergman; Fratianni, Florinda; Nazzaro, Filomena; De Feo, Vincenzo

2016-09-03

The aims of this work were to study the chemical composition of the essential oil from the leaves of Pereskia aculeata and to evaluate some biological activities of three leaf extracts. The phenolic content, antioxidant activity, and in vitro antimicrobial and antifungal activities were determined. The methanol extract showed antioxidant activity (EC50 7.09 mg/mL) and high polyphenols content (15.04 ± 0.31 mg gallic acid equivalents (GAE)/g). The petroleum ether extract exhibited potent antibacterial activity against Escherichia coli, whereas the chloroform extract showed inhibitory activity against Bacillus cereus and Staphylococcus aureus. The petroleum ether and methanol extracts were more effective in inhibiting the growth of Aspergillus versicolor. The possible cytotoxicity of extracts on neuroblastoma SH-SY5Y cancer cell line and the influence on adenylate cyclase (ADCY) expression was also studied. P. aculeata chloroform extract showed antiproliferative activity with an IC50 value of 262.83 µg/mL. Treatments of SH-SY5Y neuroblastoma cells with 100 µg/mL of methanol extract significantly reduced ADCY1 expression.

1985 Nuclear Science Symposium, 32nd, and 1985 Symposium on Nuclear Power Systems, 17th, San Francisco, CA, October 23-25, 1985, Proceedings

NASA Technical Reports Server (NTRS)

1986-01-01

The present conference ranges over topics in high energy physics instrumentation, detectors, nuclear medical applications, health physics and environmental monitoring, reactor instrumentation, nuclear spacecraft instrumentation, the 'Fastbus' data acquisition system, circuits and systems for nuclear research facilities, and the development status of nuclear power systems. Specific attention is given to CCD high precision detectors, a drift chamber preamplifier, a Cerenkov ring imaging detector, novel scintillation glasses and scintillating fibers, a modular multidrift vertex detector, radial wire drift chambers, liquid argon polarimeters, a multianode photomultiplier, the reliability of planar silicon detectors, the design and manufacture of wedge and strip anodes, ultrafast triode photodetectors, photomultiplier tubes, a barium fluoride plastic scintillator, a fine grained neutron hodoscope, the stability of low leakage silicon photodiodes for crystal calorimeters, and X-ray proportional counters. Also considered are positron emission tomography, single photon emission computed tomography, nuclear magnetic resonance imaging, Geiger-Muller detectors, nuclear plant safeguards, a 32-bit Fastbus computer, an advanced light water reactor, and nuclear plant maintenance.

Ionizing Radiation Measurement Solution in a Hospital Environment

PubMed Central

Garcia-Sanchez, Antonio-Javier; Garcia Angosto, Enrique Angel; Moreno Riquelme, Pedro Antonio; Serna Berna, Alfredo; Ramos-Amores, David

2018-01-01

Ionizing radiation is one of the main risks affecting healthcare workers and patients worldwide. Special attention has to be paid to medical staff in the vicinity of radiological equipment or patients undergoing radioisotope procedures. To measure radiation values, traditional area meters are strategically placed in hospitals and personal dosimeters are worn by workers. However, important drawbacks inherent to these systems in terms of cost, detection precision, real time data processing, flexibility, and so on, have been detected and carefully detailed. To overcome these inconveniences, a low cost, open-source, portable radiation measurement system is proposed. The goal is to deploy devices integrating a commercial Geiger-Muller (GM) detector to capture radiation doses in real time and to wirelessly dispatch them to a remote database where the radiation values are stored. Medical staff will be able to check the accumulated doses first hand, as well as other statistics related to radiation by means of a smartphone application. Finally, the device is certified by an accredited calibration center, to later validate the entire system in a hospital environment. PMID:29419769

A laboratory activity for teaching natural radioactivity

NASA Astrophysics Data System (ADS)

Pilakouta, M.; Savidou, A.; Vasileiadou, S.

2017-01-01

This paper presents an educational approach for teaching natural radioactivity using commercial granite samples. A laboratory activity focusing on the topic of natural radioactivity is designed to develop the knowledge and understanding of undergraduate university students on the topic of radioactivity, to appreciate the importance of environmental radioactivity and familiarize them with the basic technology used in radioactivity measurements. The laboratory activity is divided into three parts: (i) measurements of the count rate with a Geiger-Muller counter of some granite samples and the ambient background radiation rate, (ii) measurement of one of the samples using gamma ray spectrometry with a NaI detector and identification of the radioactive elements of the sample, (iii) using already recorded 24 h gamma ray spectra of the samples from the first part (from the Granite Gamma-Ray Spectrum Library (GGRSL) of our laboratory) and analyzing selected peaks in the spectrum, students estimate the contribution of each radioactive element to the total specific activity of each sample. A brief description of the activity as well as some results and their interpretation are presented.

Improved non-destructive method for 90Sr activity determination in aqueous solutions using Monte Carlo simulation.

PubMed

Samardžić, Selena; Milošević, Miodrag; Todorović, Nataša; Lakatoš, Robert

2018-04-04

The development of new methods and improvements of existing methods for the specific activity determination of 90 Sr and other distinct beta emitters has been of considerable interest. The reason for this interest is that the notably small number of methods that are able to meet all the set criteria, such as reliability of the results, measurement uncertainty and time, and minimum production of radioactive waste, as well as applicability to various samples with reference to their nature, geometry and composition. In this paper, two methods for rapid 90 Sr activity determination based on Monte Carlo simulations are used, one for a Si semiconductor detector for beta spectrometric measurements and the other for the Geiger-Muller (GM) ionization probe. To improve the reliability of the measurement results, samples with high and low strontium activity solutions were prepared in the form of dry residues. The results of the proposed methodology were verified with a standard method using a liquid scintillation counter, and notably good agreements are achieved. Copyright © 2018 Elsevier Ltd. All rights reserved.

Epistasis among Drosophila persimilis factors conferring hybrid male sterility with D. pseudoobscura bogotana.

PubMed

Chang, Audrey S; Bennett, Sarah M; Noor, Mohamed A F

2010-10-27

The Bateson-Dobzhansky-Muller model posits that hybrid incompatibilities result from genetic changes that accumulate during population divergence. Indeed, much effort in recent years has been devoted to identifying genes associated with hybrid incompatibilities, often with limited success, suggesting that hybrid sterility and inviability are frequently caused by complex interactions between multiple loci and not by single or a small number of gene pairs. Our previous study showed that the nature of epistasis between sterility-conferring QTL in the Drosophila persimilis-D. pseudoobscura bogotana species pair is highly specific. Here, we further dissect one of the three QTL underlying hybrid male sterility between these species and provide evidence for multiple factors within this QTL. This result indicates that the number of loci thought to contribute to hybrid dysfunction may have been underestimated, and we discuss how linkage and complex epistasis may be characteristic of the genetics of hybrid incompatibilities. We further pinpoint the location of one locus that confers hybrid male sterility when homozygous, dubbed "mule-like", to roughly 250 kilobases.

Epistasis among Drosophila persimilis Factors Conferring Hybrid Male Sterility with D. pseudoobscura bogotana

PubMed Central

Chang, Audrey S.; Bennett, Sarah M.; Noor, Mohamed A. F.

2010-01-01

The Bateson-Dobzhansky-Muller model posits that hybrid incompatibilities result from genetic changes that accumulate during population divergence. Indeed, much effort in recent years has been devoted to identifying genes associated with hybrid incompatibilities, often with limited success, suggesting that hybrid sterility and inviability are frequently caused by complex interactions between multiple loci and not by single or a small number of gene pairs. Our previous study showed that the nature of epistasis between sterility-conferring QTL in the Drosophila persimilis-D. pseudoobscura bogotana species pair is highly specific. Here, we further dissect one of the three QTL underlying hybrid male sterility between these species and provide evidence for multiple factors within this QTL. This result indicates that the number of loci thought to contribute to hybrid dysfunction may have been underestimated, and we discuss how linkage and complex epistasis may be characteristic of the genetics of hybrid incompatibilities. We further pinpoint the location of one locus that confers hybrid male sterility when homozygous, dubbed “mule-like”, to roughly 250 kilobases. PMID:21060872

Ultrastructural and clinical evidence of subretinal debris accumulation in type 2 macular telangiectasia.

PubMed

Cherepanoff, Svetlana; Killingsworth, Murray C; Zhu, Meidong; Nolan, Timothy; Hunyor, Alex P; Young, Stephanie H; Hageman, Gregory S; Gillies, Mark C

2012-11-01

To describe subretinal debris found on ultrastructural examination in an eye with macular telangiectasia (MacTel) type 2 and on optical coherence tomography (OCT) in a subset of patients with MacTel type 2. Blocks from the mid-periphery and temporal perifovea of an eye with clinically documented MacTel type 2 were examined with electron microscopy (EM). Cases came from the Sydney centre of the MacTel project and the practices of the authors. On EM examination, subretinal debris was found in the perifovea with accumulation of degenerate photoreceptor elements in the subretinal space. Despite the substantial subretinal debris, there was minimal retinal pigment epithelial (RPE) reaction. Focal defects were seen in the inner limiting membrane in the perifovea. Of the 65 Sydney MacTel project participants, three (5%) had prominent yellow material at the fovea. OCT revealed smooth mounds between the RPE and the ellipsoid region. The material was hyperautofluorescent. This study suggests that subretinal accumulation of photoreceptor debris may be a feature of MacTel type 2. Ultrastructural and OCT evidence of disease beyond the vasculature, involving photoreceptors and Muller cells, is presented.

Learning about evolution from sequence data

NASA Astrophysics Data System (ADS)

Dayarian, Adel; Shraiman, Boris

2012-02-01

Recent advances in sequencing and in laboratory evolution experiments have made possible to obtain quantitative data on genetic diversity of populations and on the dynamics of evolution. This dynamics is shaped by the interplay between selection acting on beneficial and deleterious mutations and recombination which reshuffles genotypes. Mounting evidence suggests that natural populations harbor extensive fitness diversity, yet most of the currently available tools for analyzing polymorphism data are based on the neutral theory. Our aim is to develop methods to analyze genomic data for populations in the presence of the above-mentioned factors. We consider different evolutionary regimes - Muller's ratchet, mutation-recombination-selection balance and positive adaption rate - and revisit a number of observables considered in the nearly-neutral theory of evolution. In particular, we examine the coalescent structure in the presence of recombination and calculate quantities such as the distribution of the coalescent times along the genome, the distribution of haplotype block sizes and the correlation between ancestors of different loci along the genome. In addition, we characterize the probability and time of fixation of mutations as a function of their fitness effect.

Decision Making in the Management of Extracapsular Fractures of the Proximal Femur – is the Dynamic Hip Screw the Prevailing Gold Standard?

PubMed Central

Jacob, Joshua; Desai, Ankit; Trompeter, Alex

2017-01-01

Currently, approximately half of all hip fractures are extracapsular, with an incidence as high as 50 in 100,000 in some countries. The common classification systems fail to explain the logistics of fracture classification and whether they all behave in the same manner. The Muller AO classification system is a useful platform to delineate stable and unstable fractures. The Dynamic hip screw (DHS) however, has remained the ‘gold standard’ implant of choice for application in all extracapsular fractures. The DHS relies on the integrity and strength of the lateral femoral wall as well as the postero-medial fragment. An analysis of several studies indicates significant improvements in design and techniques to ensure a better outcome with intramedullary nails. This article reviews the historical trends that helped to evolve the DHS implant as well as discussing if the surgeon should remain content with this implant. We suggest that the gold standard surgical management of extracapsular fractures can, and should, evolve. PMID:29290858

Indoor External Radiation Risk in Densely Populated Regions of Southern Nigeria

NASA Astrophysics Data System (ADS)

Ife-Adediran, Oluwatobi O.; Uwadiae, Iyobosa B.

2018-02-01

It is known that certain types of building materials contain significant concentrations of natural radionuclides; consequently, exposure to indoor background radiation is from the combined radioactivity from the soil as well as building materials; indoor exposures therefore have higher radiation hazard potentials than outdoor exposures in this regard and hence, need to be monitored. In this paper, an evaluation of background ionizing radiation from different buildings in Lagos and Ibadan, Southwestern Nigeria was carried out to determine the exposure rate of the general public to indoor ionizing radiation. 630 in situ measurements from the different buildings were taken using a Geiger Muller counter (model GQ-320 Plus). The indoor dose rates (i.e., 50-120 nGy/h) were within the world average values while the Annual Effective Dose for most of the buildings were above the world average AED for indoor gamma exposure from building materials. The mean AED for Lagos and Ibadan due to indoor exposures were 0.37 and 0.39 mSv/y with Excess Lifetime Cancer Risk of 0.99E-3 and 1.05E-3, respectively.

First attempt of at-cavity cryogenic X-ray detection in a CEBAF cryomodule for field emission monitoring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Geng, Rongli; Daly, Edward; Drury, Michael

2015-09-01

We report on the first result of at-cavity X-ray detection in a CEBAF cryomodule for field emission monitoring. In the 8-cavity cryomodule F100, two silicon diodes were installed near the end flange of each cavity. Each cavity was individually tested during the cryomodule test in JLab’s cryomodule test facility. The behaviors of these at-cavity cryogenic X-ray detectors were compared with those of the standard ‘in air’ Geiger-Muller (G-M) tubes. Our initial experiments establish correlation between X-ray response of near diodes and the field emission source cavity in the 8-cavity string. For two out of these eight cavities, we also carriedmore » out at-cavity X-ray detection experiment during their vertical testing. The aim is to track field emission behavior uniquely from vertical cavity testing to horizontal cavity testing in the cryomodule. These preliminary results confirmed our expectation and warrant further effort toward the establishment of permanent at-cavity cryogenic X-ray detection for SRF development and operation.« less

Indoor External Radiation Risk in Densely Populated Regions of Southern Nigeria

NASA Astrophysics Data System (ADS)

Ife-Adediran, Oluwatobi O.; Uwadiae, Iyobosa B.

2018-05-01

It is known that certain types of building materials contain significant concentrations of natural radionuclides; consequently, exposure to indoor background radiation is from the combined radioactivity from the soil as well as building materials; indoor exposures therefore have higher radiation hazard potentials than outdoor exposures in this regard and hence, need to be monitored. In this paper, an evaluation of background ionizing radiation from different buildings in Lagos and Ibadan, Southwestern Nigeria was carried out to determine the exposure rate of the general public to indoor ionizing radiation. 630 in situ measurements from the different buildings were taken using a Geiger Muller counter (model GQ-320 Plus). The indoor dose rates (i.e., 50-120 nGy/h) were within the world average values while the Annual Effective Dose for most of the buildings were above the world average AED for indoor gamma exposure from building materials. The mean AED for Lagos and Ibadan due to indoor exposures were 0.37 and 0.39 mSv/y with Excess Lifetime Cancer Risk of 0.99E-3 and 1.05E-3, respectively.

Differential cellular and subcellular distribution of glutamate transporters in the cat retina.

PubMed

Fyk-Kolodziej, Bozena; Qin, Pu; Dzhagaryan, Arturik; Pourcho, Roberta G

2004-01-01

Retrieval of glutamate from extracellular sites in the retina involves at least five excitatory amino acid transporters. Immunocytochemical analysis of the cat retina indicates that each of these transporters exhibits a selective distribution which may reflect its specific function. The uptake of glutamate into Muller cells or astrocytes appears to depend upon GLAST and EAAT4, respectively. Staining for EAAT4 was also seen in the pigment epithelium. The remaining transporters are neuronal with GLT-1alpha localized to a number of cone bipolar, amacrine, and ganglion cells and GLT-1v in cone photoreceptors and several populations of bipolar cells. The EAAC1 transporter was found in horizontal, amacrine, and ganglion cells. Staining for EAAT5 was seen in the axon terminals of both rod and cone photoreceptors as well as in numerous amacrine and ganglion cells. Although some of the glutamate transporter molecules are positioned for presynaptic or postsynaptic uptake at glutamatergic synapses, others with localizations more distant from such contacts may serve in modulatory roles or provide protection against excitoxic or oxidative damage.

A low-complexity and high performance concatenated coding scheme for high-speed satellite communications

NASA Technical Reports Server (NTRS)

Lin, Shu; Rhee, Dojun; Rajpal, Sandeep

1993-01-01

This report presents a low-complexity and high performance concatenated coding scheme for high-speed satellite communications. In this proposed scheme, the NASA Standard Reed-Solomon (RS) code over GF(2(exp 8) is used as the outer code and the second-order Reed-Muller (RM) code of Hamming distance 8 is used as the inner code. The RM inner code has a very simple trellis structure and is decoded with the soft-decision Viterbi decoding algorithm. It is shown that the proposed concatenated coding scheme achieves an error performance which is comparable to that of the NASA TDRS concatenated coding scheme in which the NASA Standard rate-1/2 convolutional code of constraint length 7 and d sub free = 10 is used as the inner code. However, the proposed RM inner code has much smaller decoding complexity, less decoding delay, and much higher decoding speed. Consequently, the proposed concatenated coding scheme is suitable for reliable high-speed satellite communications, and it may be considered as an alternate coding scheme for the NASA TDRS system.

The EO-1 hyperion and advanced land imager sensors for use in tundra classification studies within the Upper Kuparuk River Basin, Alaska

NASA Astrophysics Data System (ADS)

Hall-Brown, Mary

The heterogeneity of Arctic vegetation can make land cover classification vey difficult when using medium to small resolution imagery (Schneider et al., 2009; Muller et al., 1999). Using high radiometric and spatial resolution imagery, such as the SPOT 5 and IKONOS satellites, have helped arctic land cover classification accuracies rise into the 80 and 90 percentiles (Allard, 2003; Stine et al., 2010; Muller et al., 1999). However, those increases usually come at a high price. High resolution imagery is very expensive and can often add tens of thousands of dollars onto the cost of the research. The EO-1 satellite launched in 2002 carries two sensors that have high specral and/or high spatial resolutions and can be an acceptable compromise between the resolution versus cost issues. The Hyperion is a hyperspectral sensor with the capability of collecting 242 spectral bands of information. The Advanced Land Imager (ALI) is an advanced multispectral sensor whose spatial resolution can be sharpened to 10 meters. This dissertation compares the accuracies of arctic land cover classifications produced by the Hyperion and ALI sensors to the classification accuracies produced by the Systeme Pour l' Observation de le Terre (SPOT), the Landsat Thematic Mapper (TM) and the Landsat Enhanced Thematic Mapper Plus (ETM+) sensors. Hyperion and ALI images from August 2004 were collected over the Upper Kuparuk River Basin, Alaska. Image processing included the stepwise discriminant analysis of pixels that were positively classified from coinciding ground control points, geometric and radiometric correction, and principle component analysis. Finally, stratified random sampling was used to perform accuracy assessments on satellite derived land cover classifications. Accuracy was estimated from an error matrix (confusion matrix) that provided the overall, producer's and user's accuracies. This research found that while the Hyperion sensor produced classfication accuracies that were equivalent to the TM and ETM+ sensor (approximately 78%), the Hyperion could not obtain the accuracy of the SPOT 5 HRV sensor. However, the land cover classifications derived from the ALI sensor exceeded most classification accuracies derived from the TM and ETM+ senors and were even comparable to most SPOT 5 HRV classifications (87%). With the deactivation of the Landsat series satellites, the monitoring of remote locations such as in the Arctic on an uninterupted basis thoughout the world is in jeopardy. The utilization of the Hyperion and ALI sensors are a way to keep that endeavor operational. By keeping the ALI sensor active at all times, uninterupted observation of the entire Earth can be accomplished. Keeping the Hyperion sensor as a "tasked" sensor can provide scientists with additional imagery and options for their studies without overburdening storage issues.

The potential of hydrodynamic analysis for the interpretation of Martian fluvial activities

NASA Astrophysics Data System (ADS)

Kim, Jungrack; Schumann, Guy; Neal, Jeffrey; Lin, Shih-Yuan

2014-05-01

After liquid water was identified as the agent of ancient Martian fluvial activities, the valley and channels on the Martian surface were investigated by a number of remote sensing and in-situ measurements. In particular, the stereo DTMs and ortho images from various successful orbital sensors are being effectively used to trace the origin and consequences of Martian hydrological channels. For instance, to analyze the Martian fluvial activities more quantitatively using the topographic products, Burr et al. (2003) employed 1D hydrodynamic models such as HEC-RAS together with the topography by MOLA to derive water flow estimates for the Athabasca Valles area on Mars [1]. Where extensive floodplain flows or detailed 2D bathymetry for the river channel exist, it may be more accurate to simulate flows in two dimensions, especially if the direction of flow is unclear a priori. Thus in this study we demonstrated a quantitative modeling method utilizing multi-resolution Martian DTMs, constructed in line with Kim and Muller's (2009) [2] approach, and an advanced hydraulics model LISFLOOD-FP (Bates et al., 2010) [3], which simulates in-channel dynamic wave behavior by solving for 2D shallow water equations without advection. Martian gravitation and manning constants were adjusted in the hydraulic model and the inflow values were iteratively refined from the outputs of the coarser to the finer model. Then we chose the target areas among Martian fluvial geomorphologies and tested the effectiveness of high resolution hydraulic modeling to retrieve the characteristics of fluvial systems. Test sites were established in the Athabasca Valles, Bahram Vallis, and Naktong Vallis respectively. Since those sites are proposed to be originated by different fluvial mechanisms, it is expected that the outputs from hydraulics modeling will provide important clues about the evolution of each fluvial system. Hydraulics modeling in the test areas with terrestrial simulation parameters was also conducted to explore the different characteristics of two planets' fluvial activities. Ultimately, this study proved the effectiveness of multi-resolution modeling using 150-1.2m DTMs and 2D hydraulics to study the Martian fluvial system. In future study, we will elaborate the hydrodynamic model to investigate the sediment transformation mechanism in Martian fluvial activities using hydrodynamic properties such as flow speed. References: [1] Burr, D.M. (2003).Hydraulic modelling of Athabasca Vallis, Mars. Hydrological Sciences Journal, 48(4), 655-664. [2] Kim, J.R. & Muller, J-P.,(2009).Multi resolution topographic data extraction from Martian stereo imagery.Planetary and Space Science. 57, 2095-2112. [3] Bates, P.D., Horritt, M.S., & Fewtrell, T.J. (2010). A simple inertial formulation of the shallow water equations for efficient two-dimensional flood inundation modelling. Journal of Hydrology, 387(1), 33-45.

DNA transposon dynamics in populations of Daphnia pulex with and without sex.

PubMed

Schaack, Sarah; Pritham, Ellen J; Wolf, Abby; Lynch, Michael

2010-08-07

We investigate the role of recombination in transposable element (TE) proliferation in the cyclical parthenogen, Daphnia pulex. Recombination provides a mechanism by which the rate of both TE gain and loss can be accelerated, a duality that has long intrigued many biologists interested in the influence of sex on mutation accumulation. We compared TE loads among populations of D. pulex where sex occurs regularly (cyclical parthenogens or 'sexuals') with those in which the ability to reproduce sexually has been completely lost (obligate 'asexuals') for six different families of DNA transposons. Transposon display assays showed that sexuals have more TEs than asexuals, contrary to the expectations under Muller's ratchet but consistent with the idea that sex facilitates TE spread. Sexuals also exhibit higher insertion site polymorphism among lineages, as predicted because recombination accelerates rates of loss and gain. Asexuals, however, have proportionally more singletons (loci occupied in a single isolate), which differs from previous studies where selfing and outcrossing were used as a proxy for high and low recombination. Our multi-element survey reveals that the impact of sex on TE proliferation is consistent among different Class II TE families and we discuss the genomic consequences of different reproductive strategies over long time periods.

Preliminary study of tin slag concrete mixture

NASA Astrophysics Data System (ADS)

Hashim, Mohd Jamil; Mansor, Ishak; Pauzi Ismail, Mohamad; Sani, Suhairy; Azmi, Azhar; Sayuti, Shaharudin; Zaidi Ibrahim, Mohd; Adli Anuar, Abul; Rahim, Abdul Adha Abdul

2018-01-01

The study focuses on practices to facilitate tin smelting industry to reduce radioactive waste product (Tin Slag) by diluting its radioactivity to a safe level and turning it to a safer infrastructural building product. In the process the concrete mix which include Portland cement, sand, tin slag, water and plasticizer are used to produce interlocking brick pavements, piles and other infrastructural products. The mixing method follows DOE (UK) standard method of mixing targeted at in selected compressive strength suitable for its function and durability. A batching machine is used in the mixing and six test cubes are produced for the test. The testing equipment used are a compressional machine, ultrasonic measurement and a Geiger Muller counter to evaluate of the concrete mix to find the lowest emission of radiation surface dose without compromising the strength of concrete mix. The result obtained indicated the radioactivity of tin slag in the mixing process has reduced to background level that is 0.5μSv/h while the strength and workability of the concrete has not been severely affected. In conclusion, the concrete mix with tin slag has shown the potential it can be turned into a safe beneficial infrastructural product with good strength.

Tissue polarimetry: concepts, challenges, applications, and outlook.

PubMed

Ghosh, Nirmalya; Vitkin, I Alex

2011-11-01

Polarimetry has a long and successful history in various forms of clear media. Driven by their biomedical potential, the use of the polarimetric approaches for biological tissue assessment has also recently received considerable attention. Specifically, polarization can be used as an effective tool to discriminate against multiply scattered light (acting as a gating mechanism) in order to enhance contrast and to improve tissue imaging resolution. Moreover, the intrinsic tissue polarimetry characteristics contain a wealth of morphological and functional information of potential biomedical importance. However, in a complex random medium-like tissue, numerous complexities due to multiple scattering and simultaneous occurrences of many scattering and polarization events present formidable challenges both in terms of accurate measurements and in terms of analysis of the tissue polarimetry signal. In order to realize the potential of the polarimetric approaches for tissue imaging and characterization/diagnosis, a number of researchers are thus pursuing innovative solutions to these challenges. In this review paper, we summarize these and other issues pertinent to the polarized light methodologies in tissues. Specifically, we discuss polarized light basics, Stokes-Muller formalism, methods of polarization measurements, polarized light modeling in turbid media, applications to tissue imaging, inverse analysis for polarimetric results quantification, applications to quantitative tissue assessment, etc.

Uniparental Inheritance Promotes Adaptive Evolution in Cytoplasmic Genomes.

PubMed

Christie, Joshua R; Beekman, Madeleine

2017-03-01

Eukaryotes carry numerous asexual cytoplasmic genomes (mitochondria and plastids). Lacking recombination, asexual genomes should theoretically suffer from impaired adaptive evolution. Yet, empirical evidence indicates that cytoplasmic genomes experience higher levels of adaptive evolution than predicted by theory. In this study, we use a computational model to show that the unique biology of cytoplasmic genomes-specifically their organization into host cells and their uniparental (maternal) inheritance-enable them to undergo effective adaptive evolution. Uniparental inheritance of cytoplasmic genomes decreases competition between different beneficial substitutions (clonal interference), promoting the accumulation of beneficial substitutions. Uniparental inheritance also facilitates selection against deleterious cytoplasmic substitutions, slowing Muller's ratchet. In addition, uniparental inheritance generally reduces genetic hitchhiking of deleterious substitutions during selective sweeps. Overall, uniparental inheritance promotes adaptive evolution by increasing the level of beneficial substitutions relative to deleterious substitutions. When we assume that cytoplasmic genome inheritance is biparental, decreasing the number of genomes transmitted during gametogenesis (bottleneck) aids adaptive evolution. Nevertheless, adaptive evolution is always more efficient when inheritance is uniparental. Our findings explain empirical observations that cytoplasmic genomes-despite their asexual mode of reproduction-can readily undergo adaptive evolution. © The Author 2016. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

The cyanobacterial thioredoxin gene is required for both photoautotrophic and heterotrophic growth.

PubMed Central

Navarro, F; Florencio, F J

1996-01-01

The gene encoding thioredoxin in the facultative heterotrophic cyanobacterium Synechocytis sp. PCC 6803 (trxA) has been cloned by heterologous hybridization using the corresponding gene trxM from the cyanobacterium Anacystis nidulans as a probe. The deduced amino acid sequence of trxA predicts a protein of relative molecular weight of 11,750 and has strong identity with its cyanobacterial counterparts and other m-type thioredoxins of photo-synthetic eukaryotes. The trxA gene has been expressed Escherichia coli as a functional protein of 12 kD and has been shown by western blot analysis to be the same size as in Synechocystis. The trxA gene is transcribed in Synechocystis as a single transcript of 450 nucleotides and accumulates to the same level under photosynthetic and heterotrophic growth conditions. The trxA gene was inactivated with a kanamycin-resistant cassette, and total segregation of the disrupted trxA gene was obtained only when the trxM gene from A. nidulans (E.D.G. Muller, B.B. Buchanan [1989] J Biol Chem 264: 4008-4014) was simultaneously expressed in Synechocytis. Our results suggest an essential role of thioredoxin not only when cells grow photosynthetically but also under heterotrophic conditions. PMID:8756494

Evolution of branched regulatory genetic pathways: directional selection on pleiotropic loci accelerates developmental system drift.

PubMed

Johnson, Norman A; Porter, Adam H

2007-01-01

Developmental systems are regulated by a web of interacting loci. One common and useful approach in studying the evolution of development is to focus on classes of interacting elements within these systems. Here, we use individual-based simulations to study the evolution of traits controlled by branched developmental pathways involving three loci, where one locus regulates two different traits. We examined the system under a variety of selective regimes. In the case where one branch was under stabilizing selection and the other under directional selection, we observed "developmental system drift": the trait under stabilizing selection showed little phenotypic change even though the loci underlying that trait showed considerable evolutionary divergence. This occurs because the pleiotropic locus responds to directional selection and compensatory mutants are then favored in the pathway under stabilizing selection. Though developmental system drift may be caused by other mechanisms, it seems likely that it is accelerated by the same underlying genetic mechanism as that producing the Dobzhansky-Muller incompatibilities that lead to speciation in both linear and branched pathways. We also discuss predictions of our model for developmental system drift and how different selective regimes affect probabilities of speciation in the branched pathway system.

Evolution of Fitness in Experimental Populations of Vesicular Stomatitis Virus

PubMed Central

Elena, S. F.; Gonzalez-Candelas, F.; Novella, I. S.; Duarte, E. A.; Clarke, D. K.; Domingo, E.; Holland, J. J.; Moya, A.

1996-01-01

The evolution of fitness in experimental clonal populations of vesicular stomatitis virus (VSV) has been compared under different genetic (fitness of initial clone) and demographic (population dynamics) regimes. In spite of the high genetic heterogeneity among replicates within experiments, there is a clear effect of population dynamics on the evolution of fitness. Those populations that went through strong periodic bottlenecks showed a decreased fitness in competition experiments with wild type. Conversely, mutant populations that were transferred under the dynamics of continuous population expansions increased their fitness when compared with the same wild type. The magnitude of the observed effect depended on the fitness of the original viral clone. Thus, high fitness clones showed a larger reduction in fitness than low fitness clones under dynamics with included periodic bottleneck. In contrast, the gain in fitness was larger the lower the initial fitness of the viral clone. The quantitative genetic analysis of the trait ``fitness'' in the resulting populations shows that genetic variation for the trait is positively correlated with the magnitude of the change in the same trait. The results are interpreted in terms of the operation of MULLER's ratchet and genetic drift as opposed to the appearance of beneficial mutations. PMID:8849878

Mitochondrial introgression suggests extensive ancestral hybridization events among Saccharomyces species.

PubMed

Peris, David; Arias, Armando; Orlić, Sandi; Belloch, Carmela; Pérez-Través, Laura; Querol, Amparo; Barrio, Eladio

2017-03-01

Horizontal gene transfer (HGT) in eukaryotic plastids and mitochondrial genomes is common, and plays an important role in organism evolution. In yeasts, recent mitochondrial HGT has been suggested between S. cerevisiae and S. paradoxus. However, few strains have been explored given the lack of accurate mitochondrial genome annotations. Mitochondrial genome sequences are important to understand how frequent these introgressions occur, and their role in cytonuclear incompatibilities and fitness. Indeed, most of the Bateson-Dobzhansky-Muller genetic incompatibilities described in yeasts are driven by cytonuclear incompatibilities. We herein explored the mitochondrial inheritance of several worldwide distributed wild Saccharomyces species and their hybrids isolated from different sources and geographic origins. We demonstrated the existence of several recombination points in mitochondrial region COX2-ORF1, likely mediated by either the activity of the protein encoded by the ORF1 (F-SceIII) gene, a free-standing homing endonuclease, or mostly facilitated by A+T tandem repeats and regions of integration of GC clusters. These introgressions were shown to occur among strains of the same species and among strains of different species, which suggests a complex model of Saccharomyces evolution that involves several ancestral hybridization events in wild environments. Copyright © 2017 Elsevier Inc. All rights reserved.

Attachment style as a mediator between childhood maltreatment and the experience of betrayal trauma as an adult.

PubMed

Hocking, Elise C; Simons, Raluca M; Surette, Renata J

2016-02-01

Previous research has demonstrated a positive association between child maltreatment and adult interpersonal trauma (Arata, 2000; Crawford & Wright, 2007). From a betrayal trauma theory perspective, evidence suggests that the experience of trauma high in betrayal (e.g., child maltreatment by parents or guardians) increases ones risk of betrayal trauma as an adult (Gobin & Freyd, 2009). However, the mechanisms explaining these associations are not well understood; attachment theory could provide further insight. Child maltreatment is associated with insecure attachment (Baer & Martinez, 2006; Muller et al., 2000). Insecure attachment is also associated with deficits in interpersonal functioning and risk for intimate partner violence, suggesting insecure attachment may mediate the relationship between child maltreatment and the experience of betrayal trauma as an adult. The current study tested this hypothesis in a sample of 601 college students. Participants completed online questionnaires including the Child Abuse and Trauma Scale (CATS), the Experiences in Close Relationships - Revised (ECR-R) and the Brief Betrayal Trauma Survey (BBTS). Results indicated that child maltreatment is associated with adult betrayal trauma and anxious attachment partially mediates this relationship. Copyright © 2016 Elsevier Ltd. All rights reserved.

The genetic basis of developmental abnormalities in interpopulation hybrids of the moss Ceratodon purpureus.

PubMed

McDaniel, Stuart F; Willis, John H; Shaw, A Jonathan

2008-07-01

Divergent populations are intrinsically reproductively isolated when hybrids between them either fail to develop properly or do not produce viable offspring. Intrinsic isolation may result from Dobzhansky-Muller (DM) incompatibilities, in which deleterious interactions among genes or gene products lead to developmental problems or underdominant chromosome structure differences between the parents. These mechanisms can be tested by studying marker segregation patterns in a hybrid mapping population. Here we examine the genetic basis of abnormal development in hybrids between two geographically distant populations of the moss Ceratodon purpureus. Approximately half of the hybrid progeny exhibited a severely reduced growth rate in early gametophyte development. We identified four unlinked quantitative trait loci (QTL) that interacted asymmetrically to cause the abnormal development phenotype. This pattern is consistent with DM interactions. We also found an excess of recombination between three marker pairs in the abnormally developing progeny, relative to that estimated in the normal progeny. This suggests that structural differences in these regions contribute to hybrid breakdown. Two QTL coincided with inferred structural differences, consistent with recent theory suggesting that rearrangements may harbor population divergence alleles. These observations suggest that multiple complex genetic factors contribute to divergence among populations of C. purpureus.

Accurate quantum Z rotations with less magic

NASA Astrophysics Data System (ADS)

Landahl, Andrew; Cesare, Chris

2013-03-01

We present quantum protocols for executing arbitrarily accurate π /2k rotations of a qubit about its Z axis. Unlike reduced instruction set computing (RISC) protocols which use a two-step process of synthesizing high-fidelity ``magic'' states from which T = Z (π / 4) gates can be teleported and then compiling a sequence of adaptive stabilizer operations and T gates to approximate Z (π /2k) , our complex instruction set computing (CISC) protocol distills magic states for the Z (π /2k) gates directly. Replacing this two-step process with a single step results in substantial reductions in the number of gates needed. The key to our construction is a family of shortened quantum Reed-Muller codes of length 2 k + 2 - 1 , whose distillation threshold shrinks with k but is greater than 0.85% for k <= 6 . AJL and CC were supported in part by the Laboratory Directed Research and Development program at Sandia National Laboratories. Sandia National Laboratories is a multi-program laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

Particle shape inhomogeneity and plasmon-band broadening of solar-control LaB6 nanoparticles

NASA Astrophysics Data System (ADS)

Machida, Keisuke; Adachi, Kenji

2015-07-01

An ensemble inhomogeneity of non-spherical LaB6 nanoparticles dispersion has been analyzed with Mie theory to account for the observed broad plasmon band. LaB6 particle shape has been characterized using small-angle X-ray scattering (SAXS) and electron tomography (ET). SAXS scattering intensity is found to vary exponentially with exponent -3.10, indicating the particle shape of disk toward sphere. ET analysis disclosed dually grouped distribution of nanoparticle dispersion; one is large-sized at small aspect ratio and the other is small-sized with scattered high aspect ratio, reflecting the dual fragmentation modes during the milling process. Mie extinction calculations have been integrated for 100 000 particles of varying aspect ratio, which were produced randomly by using the Box-Muller method. The Mie integration method has produced a broad and smooth absorption band expanded towards low energy, in remarkable agreement with experimental profiles by assuming a SAXS- and ET-derived shape distribution, i.e., a majority of disks with a little incorporation of rods and spheres for the ensemble. The analysis envisages a high potential of LaB6 with further-increased visible transparency and plasmon peak upon controlled particle-shape and its distribution.

New, rare or remarkable microfungi in the Italian Alps (Carnic Alps)--part I--ascomycotina.

PubMed

Feige, G B; Ale-Agha, N; Jensen, M; Christiaans, B; Kricke, R

2004-01-01

During our observations in the SE part of the Carnic Alps in the year 2003 we were able to collect and identify 35 ascomycetes on trees and dead wood. Among these one can find numerous ascomycetes of different orders e.g. Pyrenomycetes, Loculoascomycetes and Discomycetes. Some species like Botryosphaeria ribis GROSENLUCHER & DUGGAR on Ribes alpinum L., Dothiora pyrenophora (FR.) FR. on Sorbus aucuparia L., Gemmamyces piceae (BORTH.) CASAGO. on Picea excelsa (LAM.) LINK, Glomerella montana (SACC.) v. ARX & E. MULLER on Sesleria caerulea (L.) ARD, Hymenoscyphus immutabilis (Fuck.) Dennis on Alnus incana (L.) Moench, Hysterographium fraxini (PERS. Ex. FR.) de Not. on Fraxinus ornus L., Lachnellula willkommii (Hartig) DENNIS [= Trichascyphella willkommii (Hartig) NANNF.] on Larix decidua MILL.,Leptosphaeria lycopodina (Mont.) SACC. on Lycopodium annotinum L., Mollisia adenostylidis REHM. on Adenostyles glabra (MILL.) DC., Pezicula cinnamomea (DC.)SACC. [ana: Cryptosporiopsis quercina PETRAK] on Quercus robur L., Pyrenopeziza petiolaris (A. & S. Ex FR.) NANNF. on Acer pseudoplatanus L., Tapesia rosae (PERS.) FUCKEL on Rosa canina L., are new for this area. All specimen are deposited in the Herbarium ESS Mycotheca Parva, Collection G.B. Feige/N. Ale-Agha.

Talua SINE biology in the genome of the Reticulitermes subterranean termites (Isoptera, Rhinotermitidae).

PubMed

Luchetti, Andrea; Mantovani, Barbara

2009-12-01

Studies on transposable elements in termites are of interest because their genome is in a permanent condition of inbreeding. In this situation, an increase in transposon copy number should be mainly due to a Muller's ratchet effect, with selection against deleterious insertions playing a major role. Short INterspersed Elements (SINEs) are non-autonomous retrotransposons, known to be stable components of eukaryotic genomes. The SINE Talua, first isolated from Reticulitermes lucifugus (Rhinotermitidae), is the only mobile element described so far in termites. In the present survey, Talua has been found widespread in the Isoptera order. In comparison with other non-termite SINEs, Talua diversity and distribution in the Reticulitermes genome demonstrate that Talua is an ancient component of termite genome and that it is significantly associated with other repeats. In particular, the element is found to be involved with microsatellite motifs either as their generator or because inserted in their nearby. Further, two new SINEs and a putative retrotranscriptase-like sequence were found linked to Talua. Talua's genomic distribution is discussed in the light of the available models on transposable element dynamics within inbred genomes, also taking into account SINE role as drivers of genetic diversity in counteracting inbreeding depression.

AREA MONITORING OF AMBIENT DOSE RATES IN PARTS OF SOUTH-WESTERN NIGERIA USING A GPS-INTEGRATED RADIATION SURVEY METER.

PubMed

Okeyode, I C; Rabiu, J A; Alatise, O O; Makinde, V; Akinboro, F G; Al-Azmi, D; Mustapha, A O

2017-04-01

A radiation monitoring system comprising a Geiger-Muller counter connected to a smart phone via Bluetooth was used for a dose rate survey in some parts of south-western Nigeria. The smart phone has the Geographical Positioning System, which provides the navigation information and saves it along with the dose rate data. A large number of data points was obtained that shows the dose rate distribution within the region. The results show that the ambient dose rates in the region range from 60 to 520 nSv -1 and showed a bias that is attributable to the influence of geology on the ambient radiation dose in the region. The geology influence was demonstrated by superimposing the dose rate plot and the geological map of the area. The potential applications of the device in determining baseline information and in area monitoring, e.g. for lost or abandoned sources, radioactive materials stockpiles, etc., were discussed in the article, particularly against the background of Nigeria's plan to develop its nuclear power program. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Online fault diagnostics and testing of area gamma radiation monitor using wireless network

NASA Astrophysics Data System (ADS)

Reddy, Padi Srinivas; Kumar, R. Amudhu Ramesh; Mathews, M. Geo; Amarendra, G.

2017-07-01

Periodical surveillance, checking, testing, and calibration of the installed Area Gamma Radiation Monitors (AGRM) in the nuclear plants are mandatory. The functionality of AGRM counting electronics and Geiger-Muller (GM) tube is to be monitored periodically. The present paper describes the development of online electronic calibration and testing of the GM tube from the control room. Two electronic circuits were developed, one for AGRM electronic test and another for AGRM detector test. A dedicated radiation data acquisition system was developed using an open platform communication server and data acquisition software. The Modbus RTU protocol on ZigBee based wireless communication was used for online monitoring and testing. The AGRM electronic test helps to carry out the three-point electronic calibration and verification of accuracy. The AGRM detector test is used to verify the GM threshold voltage and the plateau slope of the GM tube in-situ. The real-time trend graphs generated during these tests clearly identified the state of health of AGRM electronics and GM tube on go/no-go basis. This method reduces the radiation exposures received by the maintenance crew and facilitates quick testing with minimum downtime of the instrument.

[Procedure of breech presentation delivery in correlation with newborns vitality during period 2002-2005].

PubMed

Izetbegović, Sebija

2006-01-01

This retrospective study conducted on the basis of 2002 -2005 history of disease protocol of the delivery room aiming to present a vitality of newborns with breech presentation with regards to the manner of completing deliveries as well as number of mother's previous deliveries. In a two year period, there was a total of 7017 deliveries, out of which 245 (3.49%) were breech presentation cases. Out of these 245 deliveries, 9 pregnant women were admitted with foetus mortus in utero, therefore, for the purpose of further observation we used the figure of 236 pregnant women with breech presentation. Out of that number, 129 pregnancies (54.66%) were delivered by operation, whereas 107 (45.33%) pregnancies were vaginal, supported manually. Vaginal deliveries with some kind of manual support (Bracht, Veit-Smellie-Muller were presented with total of 107 pregnant women of which 50 (46.72%) were cases of first delivery, 44 (41.12%) were second delivery, 6 (5.6%) were third delivery, 2 (1.86%) were fourth delivery, 3 (2.8%) fifth delivery, 1 (0.93%) was sixth delivery and 1 (0.93%) was seventh delivery.

Topical formic acid puncture technique for the treatment of common warts.

PubMed

Bhat, R M; Vidya, K; Kamath, G

2001-06-01

Warts are a common chronic skin disorder that can be cosmetically disfiguring and, depending on the location, cause inhibition of function. The presence of dozens of topical and systemic treatments for warts is a testament to the lack of a rapid, simple, uniformly effective, inexpensive, nonscarring, and painless treatment. The purpose of this study was to determine the efficacy and safety of 85% formic acid application, an inexpensive therapy, for the treatment of warts. A placebo-controlled, nonrandomized, open trial was performed in 100 patients with common warts attending Father Muller's Medical College Hospital, Mangalore. Fifty patients received 85% formic acid application and 50 patients received placebo (water) using a topical application/needle puncture technique every other day. Ninety-two per cent of patients who received formic acid application showed complete disappearance of warts after a 3-4-week treatment period, compared to 6% in the placebo group. The results show that 85% formic acid application is a safe, economical, and effective alternative in the treatment of common warts with few side-effects and good compliance. A multicenter trial is needed to examine the efficacy and safety of this treatment.

The real code of leonardo da vinci.

PubMed

Ose, Leiv

2008-02-01

Leonardo da Vinci was born in Italy. Among the researchers and scientists, he is favourably known for his remarkable efforts in scientific work. His investigations of atherosclerosis judiciously combine three separate fields of research. In 1506, he finished his masterpiece, painting of Mona Lisa. A careful clinical examination of the famous painting reveals a yellow irregular leather-like spot at the inner end of the left upper eyelid and a soft bumpy well-defined swelling of the dorsum of the right hand beneath the index finger about 3 cm long. This is probably the first case of familial hypercholesterolemia (FH). The FH code of Leonardo da Vinci was given immense consideration by scientists like Carl Muller, who described the xanthomas tuberosum and angina pectoris. On the contrary, Akira Endo searched for microbial metabolites that would inhibit HMG-CoA reductase, the rate-limiting enzyme in the synthesis of cholesterol and finally, Michael Brown and Joseph Goldstein published a remarkable series of elegant and insightful papers in the 70s and 80s. They established that the cellular uptake of low-density lipoprotein (LDL) essentially requires the LDL receptor. this was the real Code of Leonardo da Vinci.

Arikan and Alamouti matrices based on fast block-wise inverse Jacket transform

NASA Astrophysics Data System (ADS)

Lee, Moon Ho; Khan, Md Hashem Ali; Kim, Kyeong Jin

2013-12-01

Recently, Lee and Hou (IEEE Signal Process Lett 13: 461-464, 2006) proposed one-dimensional and two-dimensional fast algorithms for block-wise inverse Jacket transforms (BIJTs). Their BIJTs are not real inverse Jacket transforms from mathematical point of view because their inverses do not satisfy the usual condition, i.e., the multiplication of a matrix with its inverse matrix is not equal to the identity matrix. Therefore, we mathematically propose a fast block-wise inverse Jacket transform of orders N = 2 k , 3 k , 5 k , and 6 k , where k is a positive integer. Based on the Kronecker product of the successive lower order Jacket matrices and the basis matrix, the fast algorithms for realizing these transforms are obtained. Due to the simple inverse and fast algorithms of Arikan polar binary and Alamouti multiple-input multiple-output (MIMO) non-binary matrices, which are obtained from BIJTs, they can be applied in areas such as 3GPP physical layer for ultra mobile broadband permutation matrices design, first-order q-ary Reed-Muller code design, diagonal channel design, diagonal subchannel decompose for interference alignment, and 4G MIMO long-term evolution Alamouti precoding design.

Mitigating Mitochondrial Genome Erosion Without Recombination.

PubMed

Radzvilavicius, Arunas L; Kokko, Hanna; Christie, Joshua R

2017-11-01

Mitochondria are ATP-producing organelles of bacterial ancestry that played a key role in the origin and early evolution of complex eukaryotic cells. Most modern eukaryotes transmit mitochondrial genes uniparentally, often without recombination among genetically divergent organelles. While this asymmetric inheritance maintains the efficacy of purifying selection at the level of the cell, the absence of recombination could also make the genome susceptible to Muller's ratchet. How mitochondria escape this irreversible defect accumulation is a fundamental unsolved question. Occasional paternal leakage could in principle promote recombination, but it would also compromise the purifying selection benefits of uniparental inheritance. We assess this tradeoff using a stochastic population-genetic model. In the absence of recombination, uniparental inheritance of freely-segregating genomes mitigates mutational erosion, while paternal leakage exacerbates the ratchet effect. Mitochondrial fusion-fission cycles ensure independent genome segregation, improving purifying selection. Paternal leakage provides opportunity for recombination to slow down the mutation accumulation, but always at a cost of increased steady-state mutation load. Our findings indicate that random segregation of mitochondrial genomes under uniparental inheritance can effectively combat the mutational meltdown, and that homologous recombination under paternal leakage might not be needed. Copyright © 2017 by the Genetics Society of America.

Response of the gut neuroendocrine system of Leuciscus cephalus (L.) to the presence of Pomphorhynchus laevis Müller, 1776 (Acanthocephala).

PubMed

Bosi, G; Domeneghini, C; Arrighi, S; Giari, L; Simoni, E; Dezfuli, B S

2005-04-01

Immunohistochemical tests were applied to sections of intestine of uninfected and Pomphorhynchus laevis Muller-infected chub, Leuciscus cephalus (L.) using 15 different antisera. Nerve cell bodies and fibres immunoreactive (IR) to the anti-bombesin, -Cholecystokinin-8 (CCK-8), -galanin, -Gastrin-Releasing Peptide (-GRP), -Nitric Oxide Synthase (-NOS), -Substance P (-SP), and -Vasoactive Intestinal Peptide (-VIP) sera were observed in the myenteric plexus of uninfected chub. The density of nerve components immunoreactive to these antisera was high in the intestine of the infected fish, especially near the site of attachment. Moreover, numerous nerve fibres, immunoreactive to anti-bombesin, -GRP, -galanin, -SP, and -VIP sera, were encountered in the connective tissue capsule surrounding the bulb and proboscis of P. laevis. The occurrence of P. laevis in the chub gut significantly increased the number of endocrine cells per intestinal fold immunoreactive to galanin, met-enkephalin and leu-enkephalin antisera. CCK-8, Neuropeptide Y and glucagon-like immunoreactive cells were less numerous in the intestine of infected chub. A large number of cells in the tunica propria-submucosa of L. cephalus infected with P. laevis were immunoreactive to anti-serotonin and -leu-enkephalin sera.

The Real Code of Leonardo da Vinci

PubMed Central

Ose, Leiv

2008-01-01

Leonardo da Vinci was born in Italy. Among the researchers and scientists, he is favourably known for his remarkable efforts in scientific work. His investigations of atherosclerosis judiciously combine three separate fields of research. In 1506, he finished his masterpiece, painting of Mona Lisa. A careful clinical examination of the famous painting reveals a yellow irregular leather-like spot at the inner end of the left upper eyelid and a soft bumpy well-defined swelling of the dorsum of the right hand beneath the index finger about 3 cm long. This is probably the first case of familial hypercholesterolemia (FH). The FH code of Leonardo da Vinci was given immense consideration by scientists like Carl Muller, who described the xanthomas tuberosum and angina pectoris. On the contrary, Akira Endo searched for microbial metabolites that would inhibit HMG-CoA reductase, the rate-limiting enzyme in the synthesis of cholesterol and finally, Michael Brown and Joseph Goldstein published a remarkable series of elegant and insightful papers in the 70s and 80s. They established that the cellular uptake of low-density lipoprotein (LDL) essentially requires the LDL receptor. In conclusion: this was the real Code of Leonardo da Vinci. PMID:19924278

Distillation with Sublogarithmic Overhead

NASA Astrophysics Data System (ADS)

Hastings, Matthew B.; Haah, Jeongwan

2018-02-01

It has been conjectured that, for any distillation protocol for magic states for the T gate, the number of noisy input magic states required per output magic state at output error rate ɛ is Ω [log (1 /ɛ )] . We show that this conjecture is false. We find a family of quantum error correcting codes of parameters ⟦ ∑ i =w +1 m (m i ),∑ i =0 w (m i ),∑ i =w +1 r +1 (r +1 i )⟧ for any integers m >2 r , r >w ≥0 , by puncturing quantum Reed-Muller codes. When m >ν r , our code admits a transversal logical gate at the ν th level of Clifford hierarchy. In a distillation protocol for magic states at the level ν =3 (T gate), the ratio of input to output magic states is O (logγ(1 /ɛ )) , where γ =log (n /k )/log (d )<0.678 for some m , r , w . The smallest code in our family for which γ <1 is on ≈258 qubits.

Age of the Australasian Tektite Strewn Field

NASA Astrophysics Data System (ADS)

Izokh, E. P.

1993-07-01

As Fig. 1 shows, the widespread belief that the age of the Australasian tektite strewn field (AATSF) is ~0.7 m.y. appeared to be conventional. Tektites of different fission-track ages were found within the AATSF: 0.83 m.y. [1], 3.54-4.25 m.y. [2], and ~11 m.y. [3]. The first systematic investigation of the tektites, which were collected from a single stratigraphic layer in Vietnam, revealed three statistically discrete tektite age groups: 0.4, 0.6, and 0.8 m.y. [4]. Similar tektites 0.75 m.y. and 1.1 m.y. in age are typical of the Zhamanshin impact crater, which represents an eminent part of the AATSF [5]. Fig. 1, which appears here in the hard copy, shows radiogenic dating: 1-2: AATSF; 3-4: Zhamanshin; 1,3: data with known annealing correction. Compiled after Zahringer, 1963; Fleischer and Price, 1964; Gentner et al., 1969; McDougal and Lovering, 1969; Fleischer et al., 1969; Storzer and Wagner, 1979, 1980; Watanabe et al., 1985; Virk, 1985; Shukolukov et al., 1986; Kashkarov et al, 1986, 1987; Kolesnikov et al., 1987; Storzer and Muller-Sonhius, 1986; Arakelyants et al., 1988; etc. The very young geological age of the AATSF was established in Australia, and was confirmed by the author in Vietnam and in the Zhamanshin impact crater. This well-known tektite age paradox strongly supports an extraterrestrial origin of tektites. The paradox is fatal to the currently dominating Earth- impact theory of tektite origin, and we are not surprised that there are no continued attempts to either silence or disavow its significance. As a matter of fact, the formation of the gigantic AATSF can be considered as the main reason for the abrupt catastrophic climatic global changes and mass extinction of species on the Pleistocene/Holocene boundary 10,000 years ago [5,6]. The age-paradox scope dictates that tektites have been periodically formed and accumulated somewhere on an as-yet-unknown planetary body and then delivered to the Earth. The extraterrestrial volcanic eruptions seem to be the most appropriate process of the tektite formation and launching [7]. The frequent shift of the K-Ar ages relative to the fission-track ages of tektites can be explained by the presence of an extra argon inherited from some older crystalline inclusions foreign to the tektite glass. These inclusions are most common to the Muong Nong-type layered tektites and to flanges of the button-shape australites, and can be considered as an extraterrestrial environmental dust peppering. References: [1] Storzer and Wagner (1980) Meteoritics, 15, 372. [2] Fleischer et al. (1969) EPSL, 7, 51-52. [3] Storzer and Muller-Sonhius (1986) Meteoritics, 21, 518-519. [4] Kashkarov et al. (1986) Meteoritika, 45, 105-170. [5] Izokh (1991) Soviet Geol. and Geophys., 32, 1-10. [6] Tollman and Tollmann (1992) Mitt. Osterr. Geol. Ges., 84. [7] Izokh and Le duc An (1983) Meteoritika, 42, 158-169.

Noise Estimation and Adaptive Encoding for Asymmetric Quantum Error Correcting Codes

NASA Astrophysics Data System (ADS)

Florjanczyk, Jan; Brun, Todd; CenterQuantum Information Science; Technology Team

We present a technique that improves the performance of asymmetric quantum error correcting codes in the presence of biased qubit noise channels. Our study is motivated by considering what useful information can be learned from the statistics of syndrome measurements in stabilizer quantum error correcting codes (QECC). We consider the case of a qubit dephasing channel where the dephasing axis is unknown and time-varying. We are able to estimate the dephasing angle from the statistics of the standard syndrome measurements used in stabilizer QECC's. We use this estimate to rotate the computational basis of the code in such a way that the most likely type of error is covered by the highest distance of the asymmetric code. In particular, we use the [ [ 15 , 1 , 3 ] ] shortened Reed-Muller code which can correct one phase-flip error but up to three bit-flip errors. In our simulations, we tune the computational basis to match the estimated dephasing axis which in turn leads to a decrease in the probability of a phase-flip error. With a sufficiently accurate estimate of the dephasing axis, our memory's effective error is dominated by the much lower probability of four bit-flips. Aro MURI Grant No. W911NF-11-1-0268.

What does it mean to go public? The American response to Lysenkoism, reconsidered.

PubMed

Wolfe, Audra J

2010-01-01

The American response to Lysenkoism took place at a crucial moment in the evolving relationship between science and the public. Like many professional scientific organizations in the early Cold War, the Genetics Society of America (GSA) resisted involvement in political issues. In contrast to similar societies in the physical sciences, however, the geneticists' silence cannot be explained solely by the fear of financial or political repercussions. Rather, the GSA's reluctance to engage in political discussion reflected an ongoing debate within the scientific community on the proper role for professional societies in political controversy. Those geneticists who did become embroiled in the controversy did so as individuals rather than as emissaries of the profession. Geneticists H.J. Muller, L.C. Dunn, and Theodosius Dobzhansky attempted to reach the public through a variety of outlets, including books, magazines, newspapers, and the radio, but their interventions were shaped by their individual personal and political commitments. The GSA, in contrast, attempted to combat the spread of Lysenkoism with the help of a public relations firm and a Golden Jubilee celebration of the rediscovery of Mendel's laws. The messy story of the American response to the Lysenko crisis demonstrates the limits of scientists' political involvement during the early Cold War.

The role of drug-induced sleep endoscopy in surgical planning for obstructive sleep apnea syndrome.

PubMed

Aktas, Ozturk; Erdur, Omer; Cirik, Ahmet Adnan; Kayhan, Fatma Tulin

2015-08-01

This study investigated the role of drug-induced sleep endoscopy (DISE) in the surgical treatment planning of patients with obstructive sleep apnea syndrome (OSAS). This study was conducted using patients diagnosed with OSAS between January 2007 and March 2009, who were scheduled for surgical treatment. DISE was performed using propofol in patients considered to have upper respiratory tract obstruction as indicated by Muller's maneuver. After completing the sleep endoscopy, the patient was intubated and surgery was performed (tonsillectomy and uvulopalatopharyngoplasty). A successful operation was defined as a decrease in the respiratory disturbance index to below 5 or a decrease of ≥50 % following the operation. The study included 20 patients (4 female and 16 male) aged 19-57 years. No statistically significant correlation between modified Mallampati class and operation success or between the polysomnographic stage of disease and operation success was identified. A significantly high operation success rate was found in the group with obstruction of the upper airway according to DISE (p < 0.05), whereas a significantly low operation success rate was found in the group with obstruction of the lower airway according to DISE (p < 0.01). DISE may be used to identify the localization of obstruction for diagnostic purposes, and it can be helpful in selecting the treatment method.

Hybrid incompatibilities are affected by dominance and dosage in the haplodiploid wasp Nasonia

PubMed Central

Beukeboom, Leo W.; Koevoets, Tosca; Morales, Hernán E.; Ferber, Steven; van de Zande, Louis

2015-01-01

Study of genome incompatibilities in species hybrids is important for understanding the genetic basis of reproductive isolation and speciation. According to Haldane's rule hybridization affects the heterogametic sex more than the homogametic sex. Several theories have been proposed that attribute asymmetry in hybridization effects to either phenotype (sex) or genotype (heterogamety). Here we investigate the genetic basis of hybrid genome incompatibility in the haplodiploid wasp Nasonia using the powerful features of haploid males and sex reversal. We separately investigate the effects of heterozygosity (ploidy level) and sex by generating sex reversed diploid hybrid males and comparing them to genotypically similar haploid hybrid males and diploid hybrid females. Hybrid effects of sterility were more pronounced than of inviability, and were particularly strong in haploid males, but weak to absent in diploid males and females, indicating a strong ploidy level but no sex specific effect. Molecular markers identified a number of genomic regions associated with hybrid inviability in haploid males that disappeared under diploidy in both hybrid males and females. Hybrid inviability was rescued by dominance effects at some genomic regions, but aggravated or alleviated by dosage effects at other regions, consistent with cytonuclear incompatibilities. Dosage effects underlying Bateson–Dobzhansky–Muller (BDM) incompatibilities need more consideration in explaining Haldane's rule in diploid systems. PMID:25926847

Dissecting the genetic architecture of F1 hybrid sterility in house mice.

PubMed

Dzur-Gejdosova, Maria; Simecek, Petr; Gregorova, Sona; Bhattacharyya, Tanmoy; Forejt, Jiri

2012-11-01

Hybrid sterility as a postzygotic reproductive isolation mechanism has been studied for over 80 years, yet the first identifications of hybrid sterility genes in Drosophila and mouse are quite recent. To study the genetic architecture of F(1) hybrid sterility between young subspecies of house mouse Mus m. domesticus and M. m. musculus, we conducted QTL analysis of a backcross between inbred strains representing these two subspecies and probed the role of individual chromosomes in hybrid sterility using the intersubspecific chromosome substitution strains. We provide direct evidence that the asymmetry in male infertility between reciprocal crosses is conferred by the middle region of M. m. musculus Chr X, thus excluding other potential candidates such as Y, imprinted genes, and mitochondrial DNA. QTL analysis identified strong hybrid sterility loci on Chr 17 and Chr X and predicted a set of interchangeable autosomal loci, a subset of which is sufficient to activate the Dobzhansky-Muller incompatibility of the strong loci. Overall, our results indicate the oligogenic nature of F(1) hybrid sterility, which should be amenable to reconstruction by proper combination of chromosome substitution strains. Such a prefabricated model system should help to uncover the gene networks and molecular mechanisms underlying hybrid sterility. © 2012 The Author(s). Evolution© 2012 The Society for the Study of Evolution.

Polyploidy in animals: effects of gene expression on sex determination, evolution and ecology.

PubMed

Wertheim, B; Beukeboom, L W; van de Zande, L

2013-01-01

Polyploidy is rarer in animals than in plants. Why? Since Muller's observation in 1925, many hypotheses have been proposed and tested, but none were able to completely explain this intriguing fact. New genomic technologies enable the study of whole genomes to explain the constraints on or consequences of polyploidization, rather than focusing on specific genes or life history characteristics. Here, we review a selection of old and recent literature on polyploidy in animals, with emphasis on the consequences of polyploidization for gene expression patterns and genomic network interactions. We propose a conceptual model to contrast various scenarios for changes in genomic networks, which may serve as a framework to explain the different evolutionary dynamics of polyploidy in animals and plants. We also present new insights of genetic sex determination in animals and our emerging understanding of how animal sex determination systems may hamper or enable polyploidization, including some recent data on haplodiploids. We discuss the role of polyploidy in evolution and ecology, using a gene regulation perspective, and conclude with a synopsis regarding the effects of whole genome duplications on the balance of genomic networks. See also the sister articles focusing on plants by Ashman et al. and Madlung and Wendel in this themed issue. Copyright © 2013 S. Karger AG, Basel.

Rates and Patterns of Chromosomal Evolution in Drosophila pseudoobscura and D. miranda

PubMed Central

Bartolomé, Carolina; Charlesworth, Brian

2006-01-01

Comparisons of gene orders between species permit estimation of the rate of chromosomal evolution since their divergence from a common ancestor. We have compared gene orders on three chromosomes of Drosophila pseudoobscura with its close relative, D. miranda, and the distant outgroup species, D. melanogaster, by using the public genome sequences of D. pseudoobscura and D. melanogaster and ∼50 in situ hybridizations of gene probes in D. miranda. We find no evidence for extensive transfer of genes among chromosomes in D. miranda. The rates of chromosomal rearrangements between D. miranda and D. pseudoobscura are far higher than those found before in Drosophila and approach those for nematodes, the fastest rates among higher eukaryotes. In addition, we find that the D. pseudoobscura chromosome with the highest level of inversion polymorphism (Muller's element C) does not show an unusually fast rate of evolution with respect to chromosome structure, suggesting that this classic case of inversion polymorphism reflects selection rather than mutational processes. On the basis of our results, we propose possible ancestral arrangements for the D. pseudoobscura C chromosome, which are different from those in the current literature. We also describe a new method for correcting for rearrangements that are not detected with a limited set of markers. PMID:16547107

Beyond eugenics: the forgotten scandal of hybridizing humans and apes.

PubMed

Etkind, Alexander

2008-06-01

This paper examines the available evidence on one of the most radical ideas in the history of eugenics and utopianism. In the mid-1920s, the zoology professor Ilia Ivanov submitted to the Soviet government a project for hybridizing humans and apes by means of artificial insemination. He received substantial financing and organized expeditions to Africa to catch apes for his experiments. His project caused an international sensation. The American Association for the Advancement of Atheism announced its fund-raising campaign to support Ivanov's project but gave it a scandalously racist interpretation. Ivanov's own motivation remained unclear, as did the motivation of those in the Bolshevik government who supported Ivanov until his arrest in 1930. This paper discusses three hypothetical reasons for Ivanov's adventure: first, hybridization between humans and apes, should it be successful, would support the atheist propaganda of the Bolsheviks; second, regardless of the success of hybridization, Ivanov would catch and bring to Russia apes, which were necessary for the rejuvenation programs that were fashionable among the Bolshevik elite; and third, hybridization, should it be successful, would pave the way to the New Socialist Man whose 'construction by scientific means' was the official purpose of the Bolsheviks. Ivanov's ideas were arguably important for the American proponent of reform eugenics, Herman Muller, and for the Soviet anthropologist Boris Porshnev.

Assessing the Increase in Specific Surface Area for Electrospun Fibrous Network due to Pore Induction.

PubMed

Katsogiannis, Konstantinos Alexandros G; Vladisavljević, Goran T; Georgiadou, Stella; Rahmani, Ramin

2016-10-26

The effect of pore induction on increasing electrospun fibrous network specific surface area was investigated in this study. Theoretical models based on the available surface area of the fibrous network and exclusion of the surface area lost due to fiber-to-fiber contacts were developed. The models for calculation of the excluded area are based on Hertzian, Derjaguin-Muller-Toporov (DMT), and Johnson-Kendall-Roberts (JKR) contact models. Overall, the theoretical models correlated the network specific surface area to the material properties including density, surface tension, Young's modulus, Poisson's ratio, as well as network physical properties, such as density and geometrical characteristics including fiber radius, fiber aspect ratio and network thickness. Pore induction proved to increase the network specific surface area up to 52%, compared to the maximum surface area that could be achieved by nonporous fiber network with the same physical properties and geometrical characteristics. The model based on Johnson-Kendall-Roberts contact model describes accurately the fiber-to-fiber contact area under the experimental conditions used for pore generation. The experimental results and the theoretical model based on Johnson-Kendall-Roberts contact model show that the increase in network surface area due to pore induction can reach to up to 58%.

Development of autonomous gamma dose logger for environmental monitoring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jisha, N. V.; Krishnakumar, D. N.; Surya Prakash, G.

2012-03-15

Continuous monitoring and archiving of background radiation levels in and around the nuclear installation is essential and the data would be of immense use during analysis of any untoward incidents. A portable Geiger Muller detector based autonomous gamma dose logger (AGDL) for environmental monitoring is indigenously designed and developed. The system operations are controlled by microcontroller (AT89S52) and the main features of the system are software data acquisition, real time LCD display of radiation level, data archiving at removable compact flash card. The complete system operates on 12 V battery backed up by solar panel and hence the system ismore » totally portable and ideal for field use. The system has been calibrated with Co-60 source (8.1 MBq) at various source-detector distances. The system is field tested and performance evaluation is carried out. This paper covers the design considerations of the hardware, software architecture of the system along with details of the front-end operation of the autonomous gamma dose logger and the data file formats. The data gathered during field testing and inter comparison with GammaTRACER are also presented in the paper. AGDL has shown excellent correlation with energy fluence monitor tuned to identify {sup 41}Ar, proving its utility for real-time plume tracking and source term estimation.« less

Unraveling the non-senescence phenomenon in Hydra.

PubMed

Dańko, Maciej J; Kozłowski, Jan; Schaible, Ralf

2015-10-07

Unlike other metazoans, Hydra does not experience the distinctive rise in mortality with age known as senescence, which results from an increasing imbalance between cell damage and cell repair. We propose that the Hydra controls damage accumulation mainly through damage-dependent cell selection and cell sloughing. We examine our hypothesis with a model that combines cellular damage with stem cell renewal, differentiation, and elimination. The Hydra individual can be seen as a large single pool of three types of stem cells with some features of differentiated cells. This large stem cell community prevents "cellular damage drift," which is inevitable in complex conglomerate (differentiated) metazoans with numerous and generally isolated pools of stem cells. The process of cellular damage drift is based on changes in the distribution of damage among cells due to random events, and is thus similar to Muller's ratchet in asexual populations. Events in the model that are sources of randomness include budding, cellular death, and cellular damage and repair. Our results suggest that non-senescence is possible only in simple Hydra-like organisms which have a high proportion and number of stem cells, continuous cell divisions, an effective cell selection mechanism, and stem cells with the ability to undertake some roles of differentiated cells. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Clostridium difficile in retail baskets, trolleys, conveyor belts, and plastic bags in Saudi Arabia.

PubMed

Alqumber, Mohammed A

2014-10-01

To determine Clostridium difficile (C. difficile) prevalence on retail surfaces and shoppers plastic bags. From 20 June to 10 August 2011, in a cross-sectional epidemiological study, 17 supermarkets from 2 cities, Albaha and Altaif, Saudi Arabia were sampled. A total of 800 samples, which comprised 200 samples per surveyed surface, were studied. These included baskets, trolleys, conveyer belts, and outgoing shoppers' plastic bags. Clostridium difficile strains were isolated. The isolates were characterized using ribotyping and  polymerase chain reaction for the detection of toxin A (tcdA), toxin B (tcdB), binary toxin (cdtB), and toxin C (tcdC) genes. Susceptibility to antibiotics was determined on a Muller-Hinton agar with 5% sheep blood agar using E-tests. Overall, the C. difficile prevalence on sampled surfaces was 0.75%. The highest prevalence was found on retail baskets and trolleys, followed by plastic bags. A total of 5 different ribotypes were identified. Alterations in tcdC were detected in ribotype 027 and BT1. All the identified isolates were susceptible to vancomycin, but resistant to levofloxacin. In this study, C. difficile was present at a rate of 0.75% on supermarket surfaces. Spore disinfection of implicated surfaces may be necessary to control any community-acquired infections caused by this pathogen. 

Genetic variation and co-variation for fitness between intra-population and inter-population backgrounds in the red flour beetle, Tribolium castaneum

PubMed Central

Drury, Douglas W.; Wade, Michael J.

2010-01-01

Hybrids from crosses between populations of the flour beetle, Tribolium castaneum, express varying degrees of inviability and morphological abnormalities. The proportion of allopatric population hybrids exhibiting these negative hybrid phenotypes varies widely, from 3% to 100%, depending upon the pair of populations crossed. We crossed three populations and measured two fitness components, fertility and adult offspring numbers from successful crosses, to determine how genes segregating within populations interact in inter-population hybrids to cause the negative phenotypes. With data from crosses of 40 sires from each of three populations to groups of 5 dams from their own and two divergent populations, we estimated the genetic variance and covariance for breeding value of fitness between the intra- and inter-population backgrounds and the sire × dam-population interaction variance. The latter component of the variance in breeding values estimates the change in genic effects between backgrounds owing to epistasis. Interacting genes with a positive effect, prior to fixation, in the sympatric background but a negative effect in the hybrid background cause reproductive incompatibility in the Dobzhansky-Muller speciation model. Thus, the sire × dam-population interaction provides a way to measure the progress toward speciation of genetically differentiating populations on a trait by trait basis using inter-population hybrids. PMID:21044199

Antimicrobial susceptibility pattern in nosocomial infections caused by Acinetobacter species in Asir Region, Saudi Arabia.

PubMed

Abdalla, Nazar M; Osman, Amani A; Haimour, Waleed O; Sarhan, Mohammed A A; Mohammed, Mohammed N; Zyad, Eyhab M; Al-Ghtani, Abdalla M

2013-03-15

This study aimed at evaluating the sensitivity of antibiotics towards nosocomial infections caused by Acinetobacter species. The study took place during the period Dec. 2011- Dec. 2012 at Assir Central Hospital in collaboration with the department of microbiology, college of medicine, King Khalid University, Abha. A prospective study involving 150 patients presented with nosocomial infections due to Acinetobacter species detected by bacteriological tests; direct microscopy, culture in blood agar media, fermentation test in MacConkey media and MIC (minimum inhibitory concentration) for antibiotics sensitivity using Muller Hinton media and Chemical test using API 20. A 150 nosocomial infections in this study showed gram-negative coccobacilli, non motile, glucose-negative fermentor and oxidase negative. All isolates showed 100% sensitivity to: Imipramine, Meropenem, Colistin. From the rest of tested antibiotics the higher resistant ones were; Nitrofurantoin 87% and Cefoxitin 85%. The least resistant antibiotics; Imipenem 3% and Ticarcillin 7%. While variable resistance in the rest of tested antimicrobials. A 47 patients (31.3%) have used antibiotics prior to this study. The high rate of usage occurred in elder patients. The frequency of Acinetobacter calcoaceticus baumannii complex multi-drugs resistance ABCMDR is rising including almost all commonly used antibiotics. Only few antibiotics exert 100% sensitivity towards these bacteria.

A hybrid molecular dynamics study on the non-Newtonian rheological behaviors of shear thickening fluid.

PubMed

Chen, Kaihui; Wang, Yu; Xuan, Shouhu; Gong, Xinglong

2017-07-01

To investigate the microstructural evolution dependency on the apparent viscosity in shear-thickening fluids (STFs), a hybrid mesoscale model combined with stochastic rotation dynamics (SRD) and molecular dynamics (MD) is used. Muller-Plathe reverse perturbation method is adopted to analyze the viscosities of STFs in a two-dimensional model. The characteristic of microstructural evolution of the colloidal suspensions under different shear rate is studied. The effect of diameter of colloidal particles and the phase volume fraction on the shear thickening behavior is investigated. Under low shear rate, the two-atom structure is formed, because of the strong particle attractions in adjacent layers. At higher shear rate, the synergetic pair structure extends to layered structure along flow direction because of the increasing hydrodynamics action. As the shear rate rises continuously, the layered structure rotates and collides with other particles, then turned to be individual particles under extension or curve string structure under compression. Finally, at the highest shear rate, the strings curve more severely and get into two-dimensional cluster. The apparent viscosity of the system changes from shear-thinning behavior to the shear-thickening behavior. This work presents valuable information for further understanding the shear thickening mechanism. Copyright © 2017 Elsevier Inc. All rights reserved.

Development of autonomous gamma dose logger for environmental monitoring

NASA Astrophysics Data System (ADS)

Jisha, N. V.; Krishnakumar, D. N.; Surya Prakash, G.; Kumari, Anju; Baskaran, R.; Venkatraman, B.

2012-03-01

Continuous monitoring and archiving of background radiation levels in and around the nuclear installation is essential and the data would be of immense use during analysis of any untoward incidents. A portable Geiger Muller detector based autonomous gamma dose logger (AGDL) for environmental monitoring is indigenously designed and developed. The system operations are controlled by microcontroller (AT89S52) and the main features of the system are software data acquisition, real time LCD display of radiation level, data archiving at removable compact flash card. The complete system operates on 12 V battery backed up by solar panel and hence the system is totally portable and ideal for field use. The system has been calibrated with Co-60 source (8.1 MBq) at various source-detector distances. The system is field tested and performance evaluation is carried out. This paper covers the design considerations of the hardware, software architecture of the system along with details of the front-end operation of the autonomous gamma dose logger and the data file formats. The data gathered during field testing and inter comparison with GammaTRACER are also presented in the paper. AGDL has shown excellent correlation with energy fluence monitor tuned to identify 41Ar, proving its utility for real-time plume tracking and source term estimation.

Morphofunctional evaluation of the testicle and the spermatogenic process of adult white-eyed parakeets (Aratinga leucophthalma MULLER, 1776) during the different seasons of the year.

PubMed

Peixoto, J V; Paula, T A R; Balarini, M K; Matta, S L P; Santos, J A D; Lima, C B; Peixoto, G V

2012-08-01

In this experiment, testicle fragments of 14 adult White-eyed Parakeets (Aratinga leucophthalma) were evaluated as for their seasonal reproductive activities using the following quantitative parameters: average thickness of the testicular tunica albuginea, volumetric proportion of tubular and extratubular compartments, average diameter of the seminiferous tubules and corporal weight. Parameters were created for qualitative evaluations of the degree of spermatogenic development. In this experiment, all the animals were distributed into four groups, and their testicular fragments were collected during the middle of summer, fall, winter and spring. The animals were submitted to volatile general anaesthesia, and a biopsy was made by celioscopy. The fragments collected were processed histologically. The slides were prepared and later evaluated by using an optical microscope. The average seasonal values of the corporal weight increased, starting in the winter and reaching the peak during the spring. A seasonal testicle cycle was observed, because, in the spring, the testicles showed values for the quantitative and qualitative parameters of spermatic production compatible with the period of greater activity, while the opposite thing happened during the fall. Our data indicate that the parameters of sperm production may be correlated with daily light rather than with air humidity. © 2012 Blackwell Verlag GmbH.

Evolutionary Role of Interspecies Hybridization and Genetic Exchanges in Yeasts

PubMed Central

Dujon, Bernard

2012-01-01

Summary: Forced interspecific hybridization has been used in yeasts for many years to study speciation or to construct artificial strains with novel fermentative and metabolic properties. Recent genome analyses indicate that natural hybrids are also generated spontaneously between yeasts belonging to distinct species, creating lineages with novel phenotypes, varied genetic stability, or altered virulence in the case of pathogens. Large segmental introgressions from evolutionarily distant species are also visible in some yeast genomes, suggesting that interspecific genetic exchanges occur during evolution. The origin of this phenomenon remains unclear, but it is likely based on weak prezygotic barriers, limited Dobzhansky-Muller (DM) incompatibilities, and rapid clonal expansions. Newly formed interspecies hybrids suffer rapid changes in the genetic contribution of each parent, including chromosome loss or aneuploidy, translocations, and loss of heterozygosity, that, except in a few recently studied cases, remain to be characterized more precisely at the genomic level by use of modern technologies. We review here known cases of natural or artificially formed interspecies hybrids between yeasts and discuss their potential importance in terms of genome evolution. Problems of meiotic fertility, ploidy constraint, gene and gene product compatibility, and nucleomitochondrial interactions are discussed and placed in the context of other known mechanisms of yeast genome evolution as a model for eukaryotes. PMID:23204364

[The consolidation of memory, one century on].

PubMed

Prado-Alcala, R A; Quirarte, G L

The theory of memory consolidation, based on the work published by Georg Elias Muller and Alfons Pilzecker over a century ago, continues to guide research into the neurobiology of memory, either directly or indirectly. In their classic monographic work, they concluded that fixing memory requires the passage of time (consolidation) and that memory is vulnerable during this period of consolidation, as symptoms of amnesia appear when brain functioning is interfered with before the consolidation process is completed. Most of the experimental data concerning this phenomenon strongly support the theory. In this article we present a review of experiments that have made it possible to put forward a model that explains the amnesia produced in conventional learning conditions, as well as another model related to the protection of memory when the same instances of learning are submitted to a situation involving intensive training. Findings from relatively recent studies have shown that treatments that typically produce amnesia when they are administered immediately after a learning experience (during the period in which the memory would be consolidating itself) no longer have any effect when the instances of learning involve a relatively large number of trials or training sessions, or relatively high intensity aversive events. These results are not congruent with the prevailing theories about consolidation.

Age of metamorphic events : petrochronology and hygrochronology

NASA Astrophysics Data System (ADS)

Bosse, Valerie; Villa, Igor M.

2017-04-01

Geodynamic models of the lithosphere require quantitative data from natural samples. Time is a key parameter: it allows to calculate rates and duration of geological processes and provides informations about the involved physical processes (Vance et al. 2003). Large-scale orogenic models require linking geochronological data with other parameters: structures, kinematics, magmatic and metamorphic petrology (P-T-A-X conditions), thermobarometric evolution of the lithosphere, chemical dynamics (Muller, 2003). This requires geochronometers that are both powerful chemical and petrological tracers. In-situ techniques allow dating a mineral in its petrological-microstructural environment. Getting a "date" has become quite easy... But what do we date in the end ? What is the link between the numbers obtained from the mass spectrometer and the age of the metamorphic event we are trying to date ? How can we transform the date into a geological meaningful age ? What do we learn about the behavior of the geochronometer minerals? Now that we can perform precise dating on very small samples directly in the studied rock, it is important to improve the way we interpret the ages to give them more pertinence in the geodynamic context. We propose to discuss the Th/U/Pb system isotopic closure in various metamorphic contexts using our published examples of in situ dating on monazite and zircon (Bosse et al. 2009; Didier et al. 2014, 2015). The studied examples show that (i) fluid assisted dissolution-precipitation processes rather than temperature-dependent solid diffusion predominantly govern the closure of the Th/U/Pb system (ii) monazite and zircon are sensitive to the interaction with fluids of specific composition (F, CO2, K ...), even at low temperature (iii) in the absence of fluids, monazite is able to record HT events and to retain this information in poly-orogenic contexts or during partial melting events (iv) complex chemical and isotopic zonations, well known in monazite, reflect the interaction with the surrounding mineral assemblages. An often neglected observation is that the K-Ar chronometer minerals show similar patterns of isotopic inheritance closely tied to relict patches and heterochemical retrogression phases (Villa and Williams 2013). Isotopic closure in the U-Pb and K-Ar systems follows the same principle: thermal diffusion is very slow, dissolution and reprecipitation are several orders of magnitude faster. This means that both U-Pb and K-Ar mineral chronometers are hygrochronometers. The interpretation of the ages of the different domains cannot be decoupled from the geochemical and petrological context. The focus on petrology also requires, following Villa (1998, 2016), that the ages measured in metamorphic rocks no longer can be used in geodynamic models according to the "closure temperature" concept as originally defined by Dodson (1973). Bosse et al. (2009) Chem Geol 261: 286 Didier et al. (2014) Chem Geol 381: 206 Didier et al. (2015) Contrib Mineral Petrol 170: 45 Dodson (1973) Contrib Mineral Petrol 40: 259 Muller (2003) EPSL, 206: 237 Villa (1998) Terra Nova 10: 42 Villa (2016) Chem Geol 420: 1 Villa & Williams (2013) In: Harlov & Austrheim (eds.), Metasomatism and the Chemical Transformation of Rock. Springer, p171

The Origin of Apollo Objects

DOE Office of Scientific and Technical Information (OSTI.GOV)

Perlmutter, Saul

1984-03-29

The source of the Earth-orbit-crossing asteroids has been much debated. (This class of asteroidal bodies includes the Apollo, Aten, and some Amor objects, each with its own orbital characteristics; we shall use the term Apollo objects to mean all Earth-crossers.) It is difficult to find a mechanism which would create new Apollo objects at a sufficient rate to balance the loss due to collision with planets and ejection from the solar system, and thus explain the estimated steady-state number. A likely source is the main asteroid belt, since it has similar photometric characteristics. There are gaps in the main beltmore » which correspond to orbits resonant with the orbits of Jupiter and Saturn, and it has been shown that the resonances can perturb a body into an Earth-crossing orbit. Apollo objects could thus be generated when random collisions between asteroids in the main belt sent fragments into these resonant orbits. Calculations of the creation rate from these random collisions, however, yielcl numbers too low by a factor of four. This rate could be significantly lower given the uncertainty in the efficiency of the resonance mechanism. As an alternative, it was suggested that the evaporation of a comet's volatile mantle as it passes near the sun could provide enough non-gravitational force to move the comet into an orbit with aphelion inside of Jupiter's orbit, and thus safe from ejection from the solar system. The probability of such an event occurring is unknown, although the recent discovery of the 'asteroid' 1983 TB, with an orbit matching that of the Geminid meteor shower, suggests that such a mechanism has occurred at least once. New evidence from paleontology and geophysics, however, suggests a better solution to the problem of the source of the Apollos. M. Davis, P. Hut, and R. A. Muller recently proposed that an unseen companion to the sun passes through the Oort cloud every 28 million years, sending a shower of comets to the Earth; this provides an explanation for the periodicity of the fossil record of extinctions found by D. M. Raup and J. J. Sepkoski. W. Alvarez and R. A. Muller have shown that the craters on the earth have an age distribution with a periodicity and phase consistent with this hypothesis. These periodic comet showers would of course pass through the entire solar system, colliding with other bodies besides the earth. When the target is the asteroid belt, many small comets will have sufficient kinetic energy to disrupt large asteroids. This will generate many more fragments in the resonant orbits than would be generated by random collisions of asteroids with each other, and hence more Apollo objects. In this report, we shall calculate approximately (A) the number of comets per shower which cross the asteroid belt, (B) the probability of collisions with a single asteroid per shower, (C) the number of fragments with radius > 0.5 km which reach Apollo orbits, and (D) the current expected number of Apollos derived from comet/asteroid collisions. Given conservative assumptions, the calculated number is in agreement with observations.« less

Towards a feminist global bioethics: addressing women's health concerns worldwide.

PubMed

Tong, R

2001-01-01

In this paper I argue that a global bioethics is possible. Specifically, I present the view that there are within feminist approaches to bioethics some conceptual and methodological tools necessary to forge a bioethics that embraces the health-related concerns of both developing and developed nations equally. To support my argument I discuss some of the challenges that have historically confronted feminists. If feminists accept the idea that women are entirely the same, then feminists present as fact the fiction of the essential "Woman." Not only does "Woman" not exist, -she" obscures important racial, ethnic, cultural, and class differences among women. However, if feminists stress women's differences too much, feminists lose the power to speak coherently and cogently about gender justice, women's rights, and sexual equality in general. Analyzing the ways in which the idea of difference as well as the idea of sameness have led feminists astray, I ask whether it is possible to avoid the Scylla of absolutism (imperialism, colonialism, hegemony) on the one hand and the Charybdis of relativism (postmodernism, fragmentation, Balkanization) on the other. Finally, after reflecting upon the work of Uma Narayan, Susan Muller Okin, and Martha Nussbaum, I conclude that there is a way out of this ethical bind. By focusing on women's, children's, and men's common human needs, it is possible to lay the foundation for a just and caring global bioethics.

Using Pool-seq to Search for Genomic Regions Affected by Hybrid Inviability in the copepod T. californicus.

PubMed

Lima, Thiago G; Willett, Christopher S

2018-05-11

The formation of reproductive barriers between allopatric populations involves the accumulation of incompatibilities that lead to intrinsic postzygotic isolation. The evolution of these incompatibilities is usually explained by the Dobzhansky-Muller model, where epistatic interactions that arise within the diverging populations, lead to deleterious interactions when they come together in a hybrid genome. These incompatibilities can lead to hybrid inviability, killing individuals with certain genotypic combinations, and causing the population's allele frequency to deviate from Mendelian expectations. Traditionally, hybrid inviability loci have been detected by genotyping individuals at different loci across the genome. However, this method becomes time consuming and expensive as the number of markers or individuals increases. Here, we test if a Pool-seq method can be used to scan the genome of F2 hybrids to detect genomic regions that are affected by hybrid inviability. We survey the genome of hybrids between 2 populations of the copepod Tigriopus californicus, and show that this method has enough power to detect even small changes in allele frequency caused by hybrid inviability. We show that allele frequency estimates in Pool-seq can be affected by the sampling of alleles from the pool of DNA during the library preparation and sequencing steps and that special considerations must be taken when aligning hybrid reads to a reference when the populations/species are divergent.

Distribution and structure of efferent synapses in the chicken retina

PubMed Central

Lindstrom, SH; Nacsa, N; Blankenship, T; Fitzgerald, PG; Weller, C; Vaney, DI; Wilson, M

2012-01-01

The visual system of birds includes an efferent projection from a visual area, the isthmooptic nucleus in the midbrain, back to the retina. Using a combination of anterograde labeling of efferent fibers, reconstruction of dye-filled neurons, NADPH-diaphorase staining, and transmission electron microscopy we have examined the distribution of efferent fibers and their synaptic structures in the chicken retina. We show that efferent fibers terminate strictly within the ventral retina. In 2 completely mapped retinas, only 2 fibers from a total of 15,359 terminated in the dorsal retina. The major synapse made by each efferent fiber is with a single Efferent Target Amacrine Cell (TC). This synapse consists of 5-25 boutons of 2μm diameter, each with multiple active zones, pressed into the TC soma or synapsing with a basketwork of rudimentary TC dendrites in the inner nuclear layer (INL). This basketwork, which is sheathed by Muller cells processes, defines a private neuropil in the INL within which TCs were also seen to receive input from retinal neurons. In addition to the major synapse, efferent fibers typically produce several very thin processes that terminate nearby in single small boutons and for which the soma of a local amacrine cell is one of the likely postsynaptic partners. A minority of efferent fibers also give rise to a thicker process terminating in a strongly diaphorase positive ball about 5μm in diameter. PMID:19439107

Assessing exposure to granite countertops--Part 2: Radon.

PubMed

Allen, Joseph G; Minegishi, Taeko; Myatt, Theodore A; Stewart, James H; McCarthy, John F; Macintosh, David L

2010-05-01

Radon gas ((222)Rn) is a natural constituent of the environment and a risk factor for lung cancer that we are exposed to as a result of radioactive decay of radium ((226)Ra) in stone and soil. Granite countertops, in particular, have received recent media attention regarding their potential to emit radon. Radon flux was measured on 39 full slabs of granite from 27 different varieties to evaluate the potential for exposure and examine determinants of radon flux. Flux was measured at up to six pre-selected locations on each slab and also at areas identified as potentially enriched after a full-slab scan using a Geiger-Muller detector. Predicted indoor radon concentrations were estimated from the measured radon flux using the CONTAM indoor air quality model. Whole-slab average emissions ranged from less than limit of detection to 79.4 Bq/m(2)/h (median 3.9 Bq/m(2)/h), similar to the range reported in the literature for convenience samples of small granite pieces. Modeled indoor radon concentrations were less than the average outdoor radon concentration (14.8 Bq/m(3); 0.4 pCi/l) and average indoor radon concentrations (48 Bq/m(3); 1.3 pCi/l) found in the United States. Significant within-slab variability was observed for stones on the higher end of whole slab radon emissions, underscoring the limitations of drawing conclusions from discrete samples.

Joseph A. Burton Forum Award Talk: Remembering our Humanity: the deep impact of the Russell-Einstein Manifesto

NASA Astrophysics Data System (ADS)

Lewis, Patricia M.

2009-05-01

``There lies before us, if we choose, continual progress in happiness, knowledge, and wisdom. Shall we, instead, choose death, because we cannot forget our quarrels? We appeal as human beings to human beings: Remember your humanity, and forget the rest.'' Days before his death, Albert Einstein joined Bertrand Russell and other notable scientists and philosophers in issuing a statement calling for the abolition of war and for governments to ``find peaceful means for the settlement of all matters of dispute between them." As a first step, they called for the renunciation of nuclear weapons. The initiative led to the establishment of the Pugwash Conferences on Science and World Affairs, which bring together influential scholars and public figures concerned with reducing the danger of armed conflict and seeking cooperative solutions for global problems. The Russell-Einstein Manifesto has had a major impact on the way in which people discuss the issues of peace and war. The paper traces the growing awareness of the meaning of war, ways in which violent conflict can be prevented, particularly in the nuclear age, and the humanitarian imperative for so doing. From the Russell-Einstein Manifesto, London, 9 July 1955, signed also by Max Born, Percy W. Bridgman, Leopold Infeld, Frederic Joliot-Curie, Herman J. Muller, Linus Pauling, Cecil F. Powell, Joseph Rotblat and Hideki Yukawa

Sex speeds adaptation by altering the dynamics of molecular evolution.

PubMed

McDonald, Michael J; Rice, Daniel P; Desai, Michael M

2016-03-10

Sex and recombination are pervasive throughout nature despite their substantial costs. Understanding the evolutionary forces that maintain these phenomena is a central challenge in biology. One longstanding hypothesis argues that sex is beneficial because recombination speeds adaptation. Theory has proposed several distinct population genetic mechanisms that could underlie this advantage. For example, sex can promote the fixation of beneficial mutations either by alleviating interference competition (the Fisher-Muller effect) or by separating them from deleterious load (the ruby in the rubbish effect). Previous experiments confirm that sex can increase the rate of adaptation, but these studies did not observe the evolutionary dynamics that drive this effect at the genomic level. Here we present the first, to our knowledge, comparison between the sequence-level dynamics of adaptation in experimental sexual and asexual Saccharomyces cerevisiae populations, which allows us to identify the specific mechanisms by which sex speeds adaptation. We find that sex alters the molecular signatures of evolution by changing the spectrum of mutations that fix, and confirm theoretical predictions that it does so by alleviating clonal interference. We also show that substantially deleterious mutations hitchhike to fixation in adapting asexual populations. In contrast, recombination prevents such mutations from fixing. Our results demonstrate that sex both speeds adaptation and alters its molecular signature by allowing natural selection to more efficiently sort beneficial from deleterious mutations.

Studies on the mechanism of functional cooperativity between progesterone and estrogen receptors.

PubMed

Bradshaw, M S; Tsai, S Y; Leng, X H; Dobson, A D; Conneely, O M; O'Malley, B W; Tsai, M J

1991-09-05

Steroid response elements (SREs) cooperate with many different cis-acting elements including NF-1 sites, CACCC boxes, and other SREs to induce target gene expression (Schule, R., Muller, M., Otsuka-Murakami, H., and Renkawitz, R. (1988) Nature 332, 87-90; Strahle, U., Schmid, W., and Schutz, G. (1988) EMBO J. 7, 3389-3395). Induction of gene expression can be additive or synergistic with respect to the level of activation by either transactivators. Two mechanisms have been proposed for how synergism occurs: 1) cooperative binding of transcriptional activators to DNA or 2) simultaneous interaction of individually bound activators with a common target protein. We have shown previously that cooperative binding of receptors is important for synergism between two progesterone response elements (PREs). Here we showed that an estrogen response element (ERE) and a PRE can also functionally cooperate and this synergism between an ERE and a PRE is not contributed by cooperative DNA binding. Furthermore, we have demonstrated that the activation domains of the progesterone receptor (PR) (C1Act) are required for synergism between two PREs and sufficient for confirming cooperative binding. However these two activation domains of PR are not sufficient for synergism between an ERE and a PRE. Additional regions within the NH2-terminal and COOH-terminal domains are also required for synergistic interaction between two heterologous SREs.

The mechanisms underlying the ASD advantage in visual search

PubMed Central

Kaldy, Zsuzsa; Giserman, Ivy; Carter, Alice S.; Blaser, Erik

2013-01-01

A number of studies have demonstrated that individuals with Autism Spectrum Disorders (ASD) are faster or more successful than typically developing control participants at various visual-attentional tasks (for reviews, see Dakin & Frith, 2005; Simmons, et al., 2009). This “ASD advantage” was first identified in the domain of visual search by Plaisted and colleagues (Plaisted, O’Riordan, & Baron-Cohen, 1998). Here we survey the findings of visual search studies from the past 15 years that contrasted the performance of individuals with and without ASD. Although there are some minor caveats, the overall consensus is that - across development and a broad range of symptom severity - individuals with ASD reliably outperform controls on visual search. The etiology of the ASD advantage has not been formally specified, but has been commonly attributed to ‘enhanced perceptual discrimination’, a superior ability to visually discriminate between targets and distractors in such tasks (e.g. O’Riordan, 2000). As well, there is considerable evidence for impairments of the attentional network in ASD (for a review, see Keehn, Muller, & Townsend, 2013). We discuss some recent results from our laboratory that support an attentional, rather than perceptual explanation for the ASD advantage in visual search. We speculate that this new conceptualization may offer a better understanding of some of the behavioral symptoms associated with ASD, such as over-focusing and restricted interests. PMID:24091470

How theories became knowledge: Morgan's chromosome theory of heredity in America and Britain.

PubMed

Brush, Stephen G

2002-01-01

T. H. Morgan, A. H. Sturtevant, H. J. Muller and C. B. Bridges published their comprehensive treatise The Mechanism of Mendelian Heredity in 1915. By 1920 Morgan's "Chromosome Theory of Heredity" was generally accepted by geneticists in the United States, and by British geneticists by 1925. By 1930 it had been incorporated into most general biology, botany, and zoology textbooks as established knowledge. In this paper, I examine the reasons why it was accepted as part of a series of comparative studies of theory-acceptance in the sciences. In this context it is of interest to look at the persuasiveness of confirmed novel predictions, a factor often regarded by philosophers of science as the most important way to justify a theory. Here it turns out to play a role in the decision of some geneticists to accept the theory, but is generally less important than the CTH's ability to explain Mendelian inheritance, sex-linked inheritance, non-disjunction, and the connection between linkage groups and the number of chromosome pairs; in other words, to establish a firm connection between genetics and cytology. It is remarkable that geneticists were willing to accept the CTH as applicable to all organisms at a time when it had been confirmed only for Drosophila. The construction of maps showing the location on the chromosomes of genes for specific characters was especially convincing for non-geneticists.

A selfish gene chastened: Tribolium castaneum Medea M4 is silenced by a complementary gene.

PubMed

Thomson, M Scott

2014-04-01

Maternal-effect dominant embryonic arrest (Medea) of Tribolium castaneum are autosomal factors that act maternally to cause the death of any progeny that do not inherit them. This selfish behavior is thought to result from a maternally expressed poison and zygotically expressed antidote. Medea factors and the hybrid incompatibility factor, H, have a negative interaction consistent with complementary genes of the Dobzhansky-Muller model for post-zygotic isolation. This negative interaction may result from H suppression of Medea zygotic antidote, leaving zygotes incompletely protected from maternal poison. I report here a test of the hypothesis that H also suppresses the Medea maternal poison. Viable F1 females were generated from a cross of Medea M4 strain males to H strain females. These females, heterozygous for both M4 and H, failed to express M4 maternal lethal activity when crossed to their male sibs. Transmission of non-M4 homologues from these females was confirmed using a dominant transgenic enhanced green fluorescent protein eye color marker, tightly linked in cis to M4. M4 beetles, lacking H, were selected from the F2 population. Female descendants of these clearly expressed M4 maternal lethal activity, indicating restoration of this activity after H was segregated away. I conclude that H, or a factor tightly linked to H, suppresses Medea M4 maternal poison.

The Red Queen in mitochondria: cyto-nuclear co-evolution, hybrid breakdown and human disease

PubMed Central

Chou, Jui-Yu; Leu, Jun-Yi

2015-01-01

Cyto-nuclear incompatibility, a specific form of Dobzhansky-Muller incompatibility caused by incompatible alleles between mitochondrial and nuclear genomes, has been suggested to play a critical role during speciation. Several features of the mitochondrial genome (mtDNA), including high mutation rate, dynamic genomic structure, and uniparental inheritance, make mtDNA more likely to accumulate mutations in the population. Once mtDNA has changed, the nuclear genome needs to play catch-up due to the intimate interactions between these two genomes. In two populations, if cyto-nuclear co-evolution is driven in different directions, it may eventually lead to hybrid incompatibility. Although cyto-nuclear incompatibility has been observed in a wide range of organisms, it remains unclear what type of mutations drives the co-evolution. Currently, evidence supporting adaptive mutations in mtDNA remains limited. On the other hand, it has been known that some mutations allow mtDNA to propagate more efficiently but compromise the host fitness (described as selfish mtDNA). Arms races between such selfish mtDNA and host nuclear genomes can accelerate cyto-nuclear co-evolution and lead to a phenomenon called the Red Queen Effect. Here, we discuss how the Red Queen Effect may contribute to the frequent observation of cyto-nuclear incompatibility and be the underlying driving force of some human mitochondrial diseases. PMID:26042149

Heterogeneity in macular corneal dystrophy.

PubMed

Edward, D P; Yue, B Y; Sugar, J; Thonar, E J; SunderRaj, N; Stock, E L; Tso, M O

1988-11-01

Macular corneal dystrophy is an autosomal recessive disorder in which abnormal deposits in the corneal stroma have been identified. We examined the corneal buttons of 12 patients, who had clinical features of macular dystrophy, by histochemical staining, transmission electron microscopy, and immunohistochemical techniques. All corneas exhibited positive staining with Muller Mowry's colloidal iron. Using monoclonal antibodies 1/20/5-D-4, J-10, J-19, and J-36 that recognize specific sites on the sulfated keratan sulfate molecule, we stained corneal sections by an avidin-biotin-peroxidase complex method and identified two groups of macular corneal dystrophy. One group consisting of four corneas reacted positively with all four antibodies, and the other group consisting of eight corneas did not react with any of the antibodies used. These results confirmed those recently presented by Yang et al that there may be subgroups of macular dystrophy that can be identified by immunohistochemical methods. Also, serum levels of sulfated keratan sulfate were determined in seven patients. One patient who displayed a normal level of serum keratan sulfate had positive corneal immunoreactivity. Of the six patients who lacked serum keratan sulfate, four showed negative and two had positive corneal immunostaining, suggesting at least three subgroups in the disease. An attempt was made to correlate the clinical features, histochemical-staining characteristics, and ultrastructural morphology with the immunoreactivity to keratan sulfate antibodies, but no correlations could be made.

Non-contact assessment of obstructive sleep apnea cardiovascular biomarkers using photoplethysmography imaging

NASA Astrophysics Data System (ADS)

Amelard, Robert; Pfisterer, Kaylen J.; Jagani, Shubh; Clausi, David A.; Wong, Alexander

2018-02-01

Obstructive sleep apnea (OSA) affects 20% of the adult population, and is associated with cardiovascular and cognitive morbidities. However, it is estimated that up to 80% of treatable OSA cases remain undiagnosed. Cur- rent methods for diagnosing OSA are expensive, labor-intensive, and involve uncomfortable wearable sensors. This study explored the feasibility of non-contact biophotonic assessment of OSA cardiovascular biomarkers via photoplethysmography imaging (PPGI). In particular, PPGI was used to monitor the hemodynamic response to obstructive respiratory events. Sleep apnea onset was simulated using Muller's maneuver in which breathing was obstructed by a respiratory clamp. A custom PPGI system, coded hemodynamic imaging (CHI), was positioned 1 m above the bed and illuminated the participant's head with 850 nm light, providing non-intrusive illumination for night-time monitoring. A video was recorded before, during and following an apnea event at 60 fps, yielding 17 ms temporal resolution. Per-pixel absorbance signals were extracted using a Beer-Lambert derived light transport model, and subsequently denoised. The extracted hemodynamic signal exhibited dynamic temporal modulation during and following the apnea event. In particular, the pulse wave amplitude (PWA) decreased during obstructed breathing, indicating vasoconstriction. Upon successful inhalation, the PWA gradually increased toward homeostasis following a temporal phase delay. This temporal vascular tone modulation provides insight into autonomic and vascular response, and may be used to assess sleep apnea using non-contact biophotonic imaging.

An assessment of absorbed dose and radiation hazard index from soil around repository facility at Bukit Kledang, Perak, Malaysia

NASA Astrophysics Data System (ADS)

Adziz, M. I. Abdul; Khoo, K. S.

2018-01-01

The process of natural decay of radionuclides that emit gamma rays can infect humans and other living things. In this study, soil samples were taken at various locations which have been identified around the Long Term Storage Facility (LTSF) in Bukit Kledang, Perak. In addition, the respective dose rates in the sampling sites were measured at 5cm and 1m above the ground using a survey meter with Geiger Muller (GM) detector. Soil samples were taken using a hand Auger and then brought back to the laboratory for sample prepreparation process. The measuring of radioactivity concentration in soil samples were carried out using gamma spectrometer counting system equipped with HPGe detector. The obtained results show, the radioactivity concentration ranged from 11.98 - 29.93 Bq/kg for Radium-226 (226Ra), 20.97 - 41.45 Bq/kg for Thorium-232 (232Th) and 5.73 - 59.41 Bq/kg for Potassium-40 (40K), with mean values of 20.83 ± 5.88 Bq/kg, 32.87 ± 5.88 Bq/kg and 21.50 ± 2.79 Bq/kg, respectively. To assess the radiological hazards of natural radioactivity, radium equivalent activity (Raeq), the rate of absorption dose (D), the annual effective dose and external hazard index (Hex) was calculated and compared to the world average values.

Nuclear Research Reactor IEA-R1 - A Study of the Preparing for Decommissioning

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lopes, Valdir Maciel; Filho, Tufic Madi; Ricci, Walter

2015-07-01

The Institute of Energy and Nuclear Research (IPEN), Sao Paulo, according to the assignments given by the National Commission of Nuclear Energy (CNEN), enabled the development of this study, especially operational reports about refurbishing carried out on 2013, involving the production of radioisotopes and research in the areas of Radiochemistry and Nuclear Physics. These reports are made in accordance with established standard procedures to meet the requirements of CNEN (National Nuclear Energy Commission, the regulator the nuclear area activities in Brazil) and IAEA (International Atomic Energy Agency). This study presents an assessment of the procedures and methods of treatments formore » decontamination of the refrigeration primary circuit and changes parts, equipment and tubes of the of the IEA-R1 nuclear research reactor, pool type, power between 3,5 and 4,5 MW. In order to have a sequence in the work, the well-known contaminant radioisotopes were evaluated firstly, using Geiger- Muller equipment. In the second phase, the decontamination was done manually together with the ultrasound cleaning and washing equipment. From the several water solutions of citric acid assessment, the concentration with better confidence was obtained; in order to achieve the best results for decontamination. This study intends to define the best process for decontamination with low taxes of waste and without expensive costs. (authors)« less

Decision making for position-dependent obstructive sleep apnea syndrome on the basis of patient information and physical examinations of the upper airway, acquired on an outpatient basis.

PubMed

Endo, Minoru; Kondo, Takahito; Shimada, Rie; Tsukahara, Kiyoaki

2018-06-01

Patients with body mass index (BMI) < 25 kg/m 2 and obstructive sleep apnea syndrome (OSAS) are highly suspicious for position-dependent OSAS. Diagnosis of position-dependent/position-independent OSAS can be difficult in patients satisfying both 'BMI >25 kg/m 2 ' and 'any of tongue enlargement (TE), palatine tonsil hypertrophy (PTH) and obstruction by Muller's maneuver (OMM)'. Polysomnography is warranted in such patients. The objective was to retrospectively elucidate criteria for differentiating position-dependent OSAS on the basis of patient information and physical examinations of the upper airway obtainable in clinics. The 643 patients were categorized as positional patients (PPs) or non-positional patients (NPPs). The patient background factors examined were sex, age, BMI, and hypertension. TE, PTH, pharyngeal tonsil hypertrophy, and OMM were evaluated. Cross-validation was performed using even-numbered registrations as the training set group (Group A) and odd-numbered registrations as the test case group (Group B). In Group A, patients with BMI <25 kg/m 2 were clearly more frequent among PP than among NPP. In Group A with BMI ≥25 kg/m 2 , significant differences were found for TE, PTH and OMM. Significant differences were found between 0 and 1/2/3 for number of factors. Results generated from Group A were validated in Group B.

Differences by Gender in Predictors of Motivation Among Substance Abuse Treatment Participants.

PubMed

Taylor, Liana R; Caudy, Michael; Blasko, Brandy L; Taxman, Faye S

2017-03-21

Substance-involved females tend to have different clinical profiles than men (Adams, Leukefeld, & Peden, 2008 ); yet they do not appear to have worse treatment outcomes (Green, 2006 ; Hser, Huang, Teruya, & Anglin, 2003 ). As motivation for treatment is considered essential in the substance abuse treatment context (Cahill, Adinoff, Hosig, Muller, & Pulliam, 2003 ; Longshore & Teruya, 2006 ), it is possible that higher motivation among females could potentially counteract the negative effect of more risk factors. The purpose of the current study was to examine if females differ from males in their motivation for treatment using the Texas Christian University Motivation Form scales: desire for help, problem recognition, treatment readiness, pressure for treatment, and treatment needs; and whether factors predicting motivation for treatment differed between male and female participants of substance abuse treatment. The sample included 2,989 substance-involved males and 982 substance-involved females who were referred to substance abuse treatment through a case management program. Linear regression models predicting each motivation scale were analyzed, followed by gender-specific models. Overall, the results did not demonstrate a significant gender difference in the motivation scales. However, among male participants, the findings did show that Hispanic significantly predicted desire for help and alcohol as a primary drug of choice predicted treatment readiness. Findings suggest that motivation for treatment may be a gender-neutral construct, and that there is a need to better understand sociodemographic predictors of motivation.

Diet induced differences in carbon isotope fractionation between sirenians and terrestrial ungulates

USGS Publications Warehouse

Clementz, M.T.; Koch, P.L.; Beck, C.A.

2007-01-01

Carbon isotope differences (??13C) between bioapatite and diet, collagen and diet, and bioapatite and collagen were calculated for four species of sirenians, Dugong dugon (Mu??ller), Trichechus manatus (Linnaeus), Trichechus inunguis (Natterer), and the extinct Hydrodamalis gigas (Zimmerman). Bone and tooth samples were taken from archived materials collected from populations during the mid eighteenth century (H. gigas), between 1978 and 1984 (T. manatus, T. inunguis), and between 1997 and 1999 (D. dugon). Mean ??13C values were compared with those for terrestrial ungulates, carnivores, and six species of carnivorous marine mammals (cetaceans = 1; pinnipeds = 4; mustelids = 1). Significant differences in mean ??13C values among species for all tissue types were detected that separated species or populations foraging on freshwater plants or attached marine macroalgae (??13C values -4???; ??13Cbioapatite-diet ???11???). Likewise, ??13Cbioapatite-collagen values for freshwater and algal-foraging species (???7???) were greater than those for seagrass-foraging species (???5???). Variation in ??13C values calculated between tissues and between tissues and diet among species may relate to the nutritional composition of a species' diet and the extent and type of microbial fermentation that occurs during digestion of different types of plants. These results highlight the complications that can arise when making dietary interpretations without having first determined species-specific ??13Ctissue-diet values. ?? 2007 Springer-Verlag.

HISTOCHEMICAL INVESTIGATIONS OF GLYCOGEN IN EYEBALL TISSUE IN RADIATION SICKNESS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abdullaev, V.M.

1964-03-01

Dogs and rabbits were irradiated with x-ray doses of 692 and 792 r, respectively. The animals were sacrificed at different periods following irradiation and the enucleated eyeballs embedded in celloidin and paraffin for histochemical study. Glycogen was nonuniformaly distributed as granules, lumps, powder, or a homogeneous mass in the normal coats of the eye. A high glycogen content was found in the eye muscles, conjunctival epithelium, sustentacular fibers of Muller, and vessels, especially those of the iris. There was a medium amount of glycogen in the corneal epithelium, rod and cone layer, ciliary muscles, and muscle bundles of the iris.more » Little glycogen was found in the outer plexiform and inner nuclear layers of the retina and in the substantia propria. Glycogen was lacking in the endothelium of Descemet's membrane and of the iris, the epithelium of the crystalline lens, and the glial cells of the optic nerve. The content and distribution of glycogen changed, depending on the severity and stage of radiation sickness. Increased glycogen content was noted in the eye muscles, outer layers of the retina, and vitreous body. A decrease was noted in the inner layers of the retina, the conjunctival epithelium, and in the nuclei of the crystalline lens. Glycogen disappeared in the crystalline lens in the areas of homogenation and fibrogenesis. (auth)« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strait, R.S.; Pearson, P.K.; Sengupta, S.K.

A password system comprises a set of codewords spaced apart from one another by a Hamming distance (HD) that exceeds twice the variability that can be projected for a series of biometric measurements for a particular individual and that is less than the HD that can be encountered between two individuals. To enroll an individual, a biometric measurement is taken and exclusive-ORed with a random codeword to produce a reference value. To verify the individual later, a biometric measurement is taken and exclusive-ORed with the reference value to reproduce the original random codeword or its approximation. If the reproduced valuemore » is not a codeword, the nearest codeword to it is found, and the bits that were corrected to produce the codeword to it is found, and the bits that were corrected to produce the codeword are also toggled in the biometric measurement taken and the codeword generated during enrollment. The correction scheme can be implemented by any conventional error correction code such as Reed-Muller code R(m,n). In the implementation using a hand geometry device an R(2,5) code has been used in this invention. Such codeword and biometric measurement can then be used to see if the individual is an authorized user. Conventional Diffie-Hellman public key encryption schemes and hashing procedures can then be used to secure the communications lines carrying the biometric information and to secure the database of authorized users.« less

Antimicrobial activity of lactic acid bacteria isolated from bekasam against staphylococcus aureus ATCC 25923, escherichia coli ATCC 25922, and salmonella sp

NASA Astrophysics Data System (ADS)

Sari, Melia; Suryanto, Dwi; Yurnaliza

2018-03-01

Bekasam is an Indonesian fermented food made of fish. As a fermented food, this food may contain some beneficial bacteria like lactic acid bacteria (LAB), which usually have antimicrobial properties such as organic acid, hydrogen peroxide, and a bacteriocin. A study on antimicrobial activity of LAB isolated from bekasam against some pathogenic bacteria has been conducted. The purpose of this study was to know the ability of crude bacteriocin produced LAB of bekasam against Staphylococcus aureus ATCC 25923, Escherichia coli ATCC 25922, and Salmonella sp. Bekasam sample was taken from South Sumatera. LAB isolation was done using de Man Rogosa and Sharpe agar. A bacterial colony with clear zone was selected and purified to get a single colony. The antagonistic assay of the LAB was conducted in Muller-Hinton agar Selected isolates with higher clearing zone were assayed for antibacterial effect of their crude bacteriocin of different culture incubation time of 6, 9, and 12 hours. The results showed that the crude extract bacteriocin of isolate MS2 of 9 hours culture incubation time inhibited more in Staphylococcus aureus ATCC 25923 with inhibition zone of 13.1 mm, whereas isolate MS9 of 9 hours culture incubation time inhibited more in Escherichia coli ATCC 25922 and Salmonella sp. with inhibition zone of 12.7 and 7.3 mm, respectively.

Transgressive Hybrids as Hopeful Monsters.

PubMed

Dittrich-Reed, Dylan R; Fitzpatrick, Benjamin M

2013-06-01

The origin of novelty is a critical subject for evolutionary biologists. Early geneticists speculated about the sudden appearance of new species via special macromutations, epitomized by Goldschmidt's infamous "hopeful monster". Although these ideas were easily dismissed by the insights of the Modern Synthesis, a lingering fascination with the possibility of sudden, dramatic change has persisted. Recent work on hybridization and gene exchange suggests an underappreciated mechanism for the sudden appearance of evolutionary novelty that is entirely consistent with the principles of modern population genetics. Genetic recombination in hybrids can produce transgressive phenotypes, "monstrous" phenotypes beyond the range of parental populations. Transgressive phenotypes can be products of epistatic interactions or additive effects of multiple recombined loci. We compare several epistatic and additive models of transgressive segregation in hybrids and find that they are special cases of a general, classic quantitative genetic model. The Dobzhansky-Muller model predicts "hopeless" monsters, sterile and inviable transgressive phenotypes. The Bateson model predicts "hopeful" monsters with fitness greater than either parental population. The complementation model predicts both. Transgressive segregation after hybridization can rapidly produce novel phenotypes by recombining multiple loci simultaneously. Admixed populations will also produce many similar recombinant phenotypes at the same time, increasing the probability that recombinant "hopeful monsters" will establish true-breeding evolutionary lineages. Recombination is not the only (or even most common) process generating evolutionary novelty, but might be the most credible mechanism for sudden appearance of new forms.

2012 best practices for repositories collection, storage, retrieval, and distribution of biological materials for research international society for biological and environmental repositories.

PubMed

2012-04-01

Third Edition [Formula: see text] [Box: see text] Printed with permission from the International Society for Biological and Environmental Repositories (ISBER) © 2011 ISBER All Rights Reserved Editor-in-Chief Lori D. Campbell, PhD Associate Editors Fay Betsou, PhD Debra Leiolani Garcia, MPA Judith G. Giri, PhD Karen E. Pitt, PhD Rebecca S. Pugh, MS Katherine C. Sexton, MBA Amy P.N. Skubitz, PhD Stella B. Somiari, PhD Individual Contributors to the Third Edition Jonas Astrin, Susan Baker, Thomas J. Barr, Erica Benson, Mark Cada, Lori Campbell, Antonio Hugo Jose Froes Marques Campos, David Carpentieri, Omoshile Clement, Domenico Coppola, Yvonne De Souza, Paul Fearn, Kelly Feil, Debra Garcia, Judith Giri, William E. Grizzle, Kathleen Groover, Keith Harding, Edward Kaercher, Joseph Kessler, Sarah Loud, Hannah Maynor, Kevin McCluskey, Kevin Meagher, Cheryl Michels, Lisa Miranda, Judy Muller-Cohn, Rolf Muller, James O'Sullivan, Karen Pitt, Rebecca Pugh, Rivka Ravid, Katherine Sexton, Ricardo Luis A. Silva, Frank Simione, Amy Skubitz, Stella Somiari, Frans van der Horst, Gavin Welch, Andy Zaayenga 2012 Best Practices for Repositories: Collection, Storage, Retrieval and Distribution of Biological Materials for Research INTERNATIONAL SOCIETY FOR BIOLOGICAL AND ENVIRONMENTAL REPOSITORIES (ISBER) INTRODUCTION T he availability of high quality biological and environmental specimens for research purposes requires the development of standardized methods for collection, long-term storage, retrieval and distribution of specimens that will enable their future use. Sharing successful strategies for accomplishing this goal is one of the driving forces for the International Society for Biological and Environmental Repositories (ISBER). For more information about ISBER see www.isber.org . ISBER's Best Practices for Repositories (Best Practices) reflect the collective experience of its members and has received broad input from other repository professionals. Throughout this document effective practices are presented for the management of specimen collections and repositories. The term "Best Practice" is used in cases where a level of operation is indicated that is above the basic recommended practice or more specifically designates the most effective practice. It is understood that repositories in certain locations or with particular financial constraints may not be able to adhere to each of the items designated as "Best Practices". Repositories fitting into either of these categories will need to decide how they might best adhere to these recommendations within their particular circumstances. While adherence to ISBER Best Practices is strictly on a voluntary basis, it is important to note that some aspects of specimen management are governed by national/federal, regional and local regulations. The reader should refer directly to regulations for their national/federal, regional and local requirements, as appropriate. ISBER has strived to include terminology appropriate to the various specimen types covered under these practices, but here too, the reader should take steps to ensure the appropriateness of the recommendations to their particular repository type prior to the implementation of any new approaches. Important terms within the document are italicized when first used in a section and defined in the glossary. The ISBER Best Practices are periodically reviewed and revised to reflect advances in research and technology. The third edition of the Best Practices builds on the foundation established in the first and second editions which were published in 2005 and 2008, respectively.

Genome-scale analysis of positionally relocated genes

PubMed Central

Bhutkar, Arjun; Russo, Susan M.; Smith, Temple F.; Gelbart, William M.

2007-01-01

During evolution, genome reorganization includes large-scale events such as inversions, translocations, and segmental or even whole-genome duplications, as well as fine-scale events such as the relocation of individual genes. This latter category, which we will refer to as positionally relocated genes (PRGs), is the subject of this report. Assessment of the magnitude of such PRGs and of possible contributing mechanisms is aided by a comparative analysis of related genomes, where conserved chromosomal organization can aid in identifying genes that have acquired a new location in a lineage of these genomes. Here we utilize two methods to comprehensively identify relocated protein-coding genes in the recently sequenced genomes of 12 species of genus Drosophila. We use exceptions to the general rule of maintenance of chromosome arm (Muller element) association for most Drosophila genes to identify one major class of PRGs. We also identify a partially overlapping set of PRGs among “embedded genes,” located within the extents of other surrounding genes. We provide evidence that PRG movements have at least two different origins: Some events occur via retrotransposition of processed RNAs and others via a DNA-based transposition mechanism. Overall, we identify several hundred PRGs that arose within a lineage of the genus Drosophila phylogeny and provide suggestive evidence that a few thousand such events have occurred within the radiation of the insect order Diptera, thereby illustrating the magnitude of the contribution of PRG movement to chromosomal reorganization during evolution. PMID:17989252

James C. McGroddy Prize Lecutre: Iron-Based Superconductors: Discovery and Progress

NASA Astrophysics Data System (ADS)

Hosono, Hideo

2015-03-01

The largest breakthrough in the history is the discovery of high Tc Cuprates by G.Bednorz and A.Muller in 1986 and the maximum Tc exceeded 77K, boiling temperature of liquid nitrogen in 1987. However, no new superconductors with high Tc had been reported since then except MgB2 (Tc =39K) discovered by J.Akimitsu in 2001.We found LaFePO superconductor with Tc =3K in 2006 and LaFeAsO1-xFx with Tc =26K (42K at under high pressure of 5GPa) in early 2008. The latter discovery rekindled the extensive superconductivity research globally, and more than 10,000 papers have been published to now. This excitement originates from disprovement of a widely accepted belief that iron with a large magnetic moment is harmful for emergence of superconductivity and relatively high Tc. Extensive research on iron-based superconductors pushed up the maximal Tc to 56K, which is next to high Tc cuprates and has led to the discovery of more than 50 new iron-based superconducting materials to date. Seen are so many advances in elucidation of superconducting properties and pairing mechanism. In this talk, I introduce a tale to the discovery and show the current status by reviewing progresses in materials, properties, mechanism and the application covering the recent hot topics. Emphases are placed on the unique characteristics arising from multi-orbital nature which totally differs from high Tc cuprates.

MRP1 and glucosylceramide are coordinately over expressed and enriched in rafts during multidrug resistance acquisition in colon cancer cells.

PubMed

Klappe, Karin; Hinrichs, John W J; Kroesen, Bart-Jan; Sietsma, Hannie; Kok, Jan Willem

2004-07-01

Previously we have described a novel multidrug-resistant cell line, HT29(col), which displayed over expression of the multidrug-resistance protein 1 (MRP1) and an altered sphingolipid composition, including enhanced levels of glucosylceramide (GlcCer; Kok JW, Veldman RJ, Klappe K, Koning H, Filipeanu C, Muller M. Int J Cancer 2000;87:172-8). In our study, long-term screening revealed that, during colchicine-induced acquisition of multidrug resistance in a new HT29(col) cell line, increases in GlcCer occurred concomitantly with upregulation of MRP1 expression. Both MRP1 and GlcCer were found enriched in Lubrol-insoluble membrane domains. The expression of MRP1 and GlcCer were tightly correlated, as indicated also by a reversal of both at the later stage of colchicine consolidation. Resistance to colchicine was determined by MRP1, while glucosylceramide synthase (GCS) did not contribute: 1). Resistance was fully inhibited by MK571. 2). GCS expression and activity were not upregulated in HT29(col) cells. 3). Inhibition of GCS did not affect MRP1-mediated efflux function or sensitivity to colchicine. Instead, overall sphingolipid metabolism was upregulated through an increased rate of ceramide biosynthesis. In conclusion, upregulation of MRP1 occurs in concert with upregulation of GlcCer during multidrug-resistance acquisition, and both are enriched in rafts. The increased GlcCer pool does not directly modulate MRP1 function and cell survival. Copyright 2004 Wiley-Liss, Inc.

Endosymbiotic gene transfer from prokaryotic pangenomes: Inherited chimerism in eukaryotes.

PubMed

Ku, Chuan; Nelson-Sathi, Shijulal; Roettger, Mayo; Garg, Sriram; Hazkani-Covo, Einat; Martin, William F

2015-08-18

Endosymbiotic theory in eukaryotic-cell evolution rests upon a foundation of three cornerstone partners--the plastid (a cyanobacterium), the mitochondrion (a proteobacterium), and its host (an archaeon)--and carries a corollary that, over time, the majority of genes once present in the organelle genomes were relinquished to the chromosomes of the host (endosymbiotic gene transfer). However, notwithstanding eukaryote-specific gene inventions, single-gene phylogenies have never traced eukaryotic genes to three single prokaryotic sources, an issue that hinges crucially upon factors influencing phylogenetic inference. In the age of genomes, single-gene trees, once used to test the predictions of endosymbiotic theory, now spawn new theories that stand to eventually replace endosymbiotic theory with descriptive, gene tree-based variants featuring supernumerary symbionts: prokaryotic partners distinct from the cornerstone trio and whose existence is inferred solely from single-gene trees. We reason that the endosymbiotic ancestors of mitochondria and chloroplasts brought into the eukaryotic--and plant and algal--lineage a genome-sized sample of genes from the proteobacterial and cyanobacterial pangenomes of their respective day and that, even if molecular phylogeny were artifact-free, sampling prokaryotic pangenomes through endosymbiotic gene transfer would lead to inherited chimerism. Recombination in prokaryotes (transduction, conjugation, transformation) differs from recombination in eukaryotes (sex). Prokaryotic recombination leads to pangenomes, and eukaryotic recombination leads to vertical inheritance. Viewed from the perspective of endosymbiotic theory, the critical transition at the eukaryote origin that allowed escape from Muller's ratchet--the origin of eukaryotic recombination, or sex--might have required surprisingly little evolutionary innovation.

Antimicrobial activity of Carpolobia lutea extracts and fractions.

PubMed

Nwidu, Lucky L; Nwafor, Paul A; Vilegas, Wagner

2012-01-01

Carpolobia lutea (G. Don) (Polygalaceae) is a tropical medicinal plant putative in traditional medicines against gonorrhea, gingivitis, infertility, antiulcer and malaria. The present study evaluated the antimicrobial, antifungal and antihelicobacter effects of extracts C. lutea leaf, stem and root. The extracts were examined using the disc-diffusion and Microplates of 96 wells containing Muller-Hinton methods against some bacterial strains: Eschericia coli (ATCC 25922), E. coli (ATCC10418), Pseudomonas aeruginosa (ATCC 27853), Staphylococcus aureus (ATCC 25923), Staphyllococus aureus (ATCC 6571), Enterococcus faecalis (ATCC 29212) and Bacillus subtilis (NCTC 8853) and four clinical isolates: one fungi (Candida albican) and three bacteria (Salmonella, Sheigella and staphylococcus aureus). The Gram-positive bacteria: Staphylococcus aureus (ATCC 25923), Enterococcus faecalis (ATCC 29212), Bacillus subtilis (ATCC 19659) and the Gram-negative bacteria: Escherichia coli (ATCC 25922), Pseudomonas aeruginosa (ATCC 27853), Cândida albicans (ATCC 18804) and Helicobacter pylori (ATCC 43504). Some of these extracts were found to be active against some tested strains but activity against H. pylori was >1000mg/ml and good fungistatic activity against C. albican. The MIC against C. albican is in the order n-HF > CHF > ETF= EAF.The order of potency of fraction was the ethanol root > n-HF leaf > ethanol fraction stem > chloroform fraction leaf = ethyl acetate fraction leaf. Polyphenols were demonstrated in ethanol fraction, ethyl acetate fraction, crude ethyl acetate extract and ethanol extract, respectively. These polyphenols isolated may partly explain and support the use of C. lutea for the treatment of infectious diseases in traditional Ibibio medicine of Nigeria.

Mechanistic basis of infertility of mouse intersubspecific hybrids

PubMed Central

Bhattacharyya, Tanmoy; Gregorova, Sona; Mihola, Ondrej; Anger, Martin; Sebestova, Jaroslava; Denny, Paul; Simecek, Petr; Forejt, Jiri

2013-01-01

According to the Dobzhansky–Muller model, hybrid sterility is a consequence of the independent evolution of related taxa resulting in incompatible genomic interactions of their hybrids. The model implies that the incompatibilities evolve randomly, unless a particular gene or nongenic sequence diverges much faster than the rest of the genome. Here we propose that asynapsis of heterospecific chromosomes in meiotic prophase provides a recurrently evolving trigger for the meiotic arrest of interspecific F1 hybrids. We observed extensive asynapsis of chromosomes and disturbance of the sex body in >95% of pachynemas of Mus m. musculus × Mus m. domesticus sterile F1 males. Asynapsis was not preceded by a failure of double-strand break induction, and the rate of meiotic crossing over was not affected in synapsed chromosomes. DNA double-strand break repair was delayed or failed in unsynapsed autosomes, and misexpression of chromosome X and chromosome Y genes was detected in single pachynemas and by genome-wide expression profiling. Oocytes of F1 hybrid females showed the same kind of synaptic problems but with the incidence reduced to half. Most of the oocytes with pachytene asynapsis were eliminated before birth. We propose the heterospecific pairing of homologous chromosomes as a preexisting condition of asynapsis in interspecific hybrids. The asynapsis may represent a universal mechanistic basis of F1 hybrid sterility manifested by pachytene arrest. It is tempting to speculate that a fast-evolving subset of the noncoding genomic sequence important for chromosome pairing and synapsis may be the culprit. PMID:23329330

Mechanistic basis of infertility of mouse intersubspecific hybrids.

PubMed

Bhattacharyya, Tanmoy; Gregorova, Sona; Mihola, Ondrej; Anger, Martin; Sebestova, Jaroslava; Denny, Paul; Simecek, Petr; Forejt, Jiri

2013-02-05

According to the Dobzhansky-Muller model, hybrid sterility is a consequence of the independent evolution of related taxa resulting in incompatible genomic interactions of their hybrids. The model implies that the incompatibilities evolve randomly, unless a particular gene or nongenic sequence diverges much faster than the rest of the genome. Here we propose that asynapsis of heterospecific chromosomes in meiotic prophase provides a recurrently evolving trigger for the meiotic arrest of interspecific F1 hybrids. We observed extensive asynapsis of chromosomes and disturbance of the sex body in >95% of pachynemas of Mus m. musculus × Mus m. domesticus sterile F1 males. Asynapsis was not preceded by a failure of double-strand break induction, and the rate of meiotic crossing over was not affected in synapsed chromosomes. DNA double-strand break repair was delayed or failed in unsynapsed autosomes, and misexpression of chromosome X and chromosome Y genes was detected in single pachynemas and by genome-wide expression profiling. Oocytes of F1 hybrid females showed the same kind of synaptic problems but with the incidence reduced to half. Most of the oocytes with pachytene asynapsis were eliminated before birth. We propose the heterospecific pairing of homologous chromosomes as a preexisting condition of asynapsis in interspecific hybrids. The asynapsis may represent a universal mechanistic basis of F1 hybrid sterility manifested by pachytene arrest. It is tempting to speculate that a fast-evolving subset of the noncoding genomic sequence important for chromosome pairing and synapsis may be the culprit.

Method and system for normalizing biometric variations to authenticate users from a public database and that ensures individual biometric data privacy

DOEpatents

Strait, Robert S.; Pearson, Peter K.; Sengupta, Sailes K.

2000-01-01

A password system comprises a set of codewords spaced apart from one another by a Hamming distance (HD) that exceeds twice the variability that can be projected for a series of biometric measurements for a particular individual and that is less than the HD that can be encountered between two individuals. To enroll an individual, a biometric measurement is taken and exclusive-ORed with a random codeword to produce a "reference value." To verify the individual later, a biometric measurement is taken and exclusive-ORed with the reference value to reproduce the original random codeword or its approximation. If the reproduced value is not a codeword, the nearest codeword to it is found, and the bits that were corrected to produce the codeword to it is found, and the bits that were corrected to produce the codeword are also toggled in the biometric measurement taken and the codeword generated during enrollment. The correction scheme can be implemented by any conventional error correction code such as Reed-Muller code R(m,n). In the implementation using a hand geometry device an R(2,5) code has been used in this invention. Such codeword and biometric measurement can then be used to see if the individual is an authorized user. Conventional Diffie-Hellman public key encryption schemes and hashing procedures can then be used to secure the communications lines carrying the biometric information and to secure the database of authorized users.

Gendered role of appraisals of safety in psychological outcome in relation to trauma.

PubMed

Padmanabhanunni, Anita; Campbell, Jerome; Pretorius, Tyrone B

2017-09-01

This study investigated gender differences in the role of appraisals of safety in the relationship between exposure to violence and trauma-related symptoms among South African adolescents living in low socioeconomic settings. Limited research exists in developing contexts on the role of cognitive appraisals in mitigating outcome following exposure to violence. Given the prevalence of violence in South Africa and the vulnerability of youth, this type of research is valuable in identifying adolescents at risk of negative psychological outcome following exposure, and in informing intervention efforts. Adolescents (N = 498) completed an adapted version of the Harvard Trauma Questionnaire (Mollica et al., 1992) and the Safety Index (Ward, Flisher, Zissis, Muller, & Lombard, 2001). The results indicate a significant positive relationship between all violence subscales and trauma-related symptoms, whereas a significant negative relationship was found between sense of safety and trauma-related symptoms. Important gender differences were identified in the role of appraisals of safety, with more effects noted for women than men. For men, the obtained results only demonstrated a health-sustaining role. For women, the results indicated a health-sustaining role, an indirect effect, and a stress-reducing role. These findings stress the necessity of gender-specific interventions. Assessment of psychological trauma, particularly among female adolescents, needs to include measures of cognitive appraisals related to safety. Therapeutic techniques that may be particularly beneficial to adolescent girls are those focusing on promoting sense of safety and targeting dysfunctional threat appraisals. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Understanding the links between resilience and type-2 diabetes self-management: a qualitative study in South Australia.

PubMed

Wilson, A L; McNaughton, D; Meyer, S B; Ward, P R

2017-01-01

Research conducted by Ward, Muller, Tsourtos, et al. (Soc Sci Med 72(7):1140-1148, 2011) has led to the development of the psycho-social interactive model of resilience, which reveals the interaction between individual resilience factors (i.e. coping, confidence and self esteem) and external resilience environments (i.e. employment, supportive family environments and health promoting policies) in facilitating the development of resilience. This present study explored the utility of this model of resilience for understanding how people self-manage type-2 diabetes. Data were collected via 14 semi-structured life-history interviews with women and men living with type-2 diabetes mellitus (T2DM). Participants varied according to socio-demographics (gender, age, education level, income) and were recruited based on their self-reported management (or lack thereof) of T2DM. The inter-play of internal traits and external resources with additive and subtractive resilience strategies were consistent with the psycho-social interactive model of resilience. Self-management was influenced by life history. Differences in self-management and material disadvantage were also identified. Alongside increased disadvantage are higher levels of external barriers to self-management practices. This paper supports the concepts of additive and subtractive resilience strategies for use with diabetes populations; providing health professionals and policy makers with an increased understanding of how to recognize and foster patient resilience for the improvement of self-care, disease management and ultimately health outcomes.

The beginnings of radio astronomy in the Netherlands

NASA Astrophysics Data System (ADS)

van Woerden, Hugo; Strom, Richard G.

2006-06-01

The birth of Dutch radio astronomy can be rather precisely dated to 15 April 1944, when H.C. van de Hulst presented the results of his theoretical research into the origin of radio waves from space. We have investigated the events leading up to the momentous suggestion that hydrogen emission at 21 cm ought to be detectable. Both published material and letters from the Oort Archive have been consulted. Not having direct access to either radar technology or trained engineers, as was the case in countries like England and Australia, Jan Oort had to turn to a diversity of organizations: Philips Electronics Company, the Post Office, and academic colleagues in other disciplines. It was the Post Office's head of radio, A.H. de Voogt, who provided a 7.5 m Würzburg radar reflector and technical support at the Kootwijk station, starting in 1948. We trace the events leading up to the 21 cm line's detection in 1951, and discuss the early results. After a year spent rebuilding and thereby improving the receiver, C.A. Muller, together with Oort, Van de Hulst and others, was able to initiate an extensive HI survey of the Galaxy. The results fully justified the year's wait: a map of the Galaxy, spiral arms, the first rotation curve, and a much improved system of Galactic coordinates. We also present a discussion of Würzburg antennas used for research in the Netherlands, and a brief biography of A.H. de Voogt.

Unsteady sedimentation of a sphere in wormlike micellar fluids

NASA Astrophysics Data System (ADS)

Zhang, Yiran; Muller, Susan J.

2018-04-01

The unsteady sedimentation of a sphere in wormlike micellar fluids is studied experimentally through shear and extensional rheometry, sphere trajectory tracking, and particle image velocimetry. Unsteady sphere sedimentation characterized by fluctuations in the sphere settling velocity was observed for a range of sphere size and density in two non-shear-banding wormlike micellar solutions, a cetylpyridinium chloride (CpCl)-sodium salicylate (NaSal) solution and a cetyltrimethylammonium p-toluenesulfonate (CTAT)-NaCl solution. The onset of the transition from steady to unsteady sphere motion is characterized by an extensional Deborah number, D eext , defined locally in the negative wake of the falling sphere. This instability criterion is in agreement with previous findings by Mohammadigoushki and Muller [J. Rheol. 60, 587 (2016), 10.1122/1.4948800] in the wormlike micelle system of cetyltrimethylammonium bromide (CTAB) and NaSal, and appears to be universally valid independent of micelle chemistry or solution rheology (e.g., shear banding or not). Moreover, the frequency at which the sphere velocity fluctuates is found to be linearly correlated with an average shear Deborah number D es , which is a measure of the overall flow strength. This suggests that a constant critical strain is accumulated before the flow instability takes place in each velocity oscillation. The velocity fluctuations are found to become increasingly disordered with increasing elastic Mach number, M ae , indicating that the interactions between the flow instability and elastic wave propagation result in more chaotic velocity fluctuations.

Macroscopic models for shape memory alloy characterization and design

NASA Astrophysics Data System (ADS)

Massad, Jordan Elias

Shape memory alloys (SMAs) are being considered for a number of high performance applications, such as deformable aircraft wings, earthquake-resistant structures, and microdevices, due to their capability to achieve very high work densities, produce large deformations, and generate high stresses. In general, the material behavior of SMAs is nonlinear and hysteresic. To achieve the full potential of SMA actuators, it is necessary to develop models that characterize the nonlinearities and hysteresis inherent in the constituent materials. Additionally, the design of SMA actuators necessitates the development of control algorithms based on those models. We develop two models that quantify the nonlinearities and hysteresis inherent to SMAs, each in formulations suitable for subsequent control design. In the first model, we employ domain theory to quantify SMA behavior under isothermal conditions. The model involves a single first-order, nonlinear ordinary differential equation and requires as few as seven parameters that are identifiable from measurements. We develop the second model using the Muller-Achenbach-Seelecke framework where a transition state theory of nonequilibrium processes is used to derive rate laws for the evolution of material phase fractions. The fully thermomechanical model predicts rate-dependent, polycrystalline SMA behavior, and it accommodates heat transfer issues pertinent to thin-film SMAs. Furthermore, the model admits a low-order formulation and has a small number of parameters which can be readily identified using attributes of measured data. We illustrate aspects of both models through comparison with experimental bulk and thin-film SMA data.

Observations of NEA 1998 QE2 with the SMA and VLA

NASA Astrophysics Data System (ADS)

Butler, Bryan J.; Gurwell, M. A.; Moullet, A.

2013-10-01

Long wavelength (submm to cm) observations of NEAs are an important tool in their physical characterization. Such observations offer a unique probe into the subsurfaces of these bodies, to depths of 10's of cm, and reveal the surface and near-surface temperatures. These temperatures are critical in constraining the magnitude of the Yarkovsky effect, which is important for these small bodies in the inner solar system as it forces orbital drift [1]. Such observations also probe the physical state of the material in the upper layer of the NEAs; notably the thermal inertia. This is a strong indicator of bulk surface properties and can be utilized to distinguish rocky from porous surfaces. Very low thermal inertia may also indicate "rubble pile" type internal structure in NEAs [2]. Asteroid 1998 QE2 approached to within 0.04 AU on June 1, 2013; its closest approach in two centuries. With a diameter of ~2.5 km [3], it was a relatively bright target for radio wavelength observations, even given the weakness of the emission at those wavelengths (10's of microJy in the cm to 100's of milliJy in the submm). We used the SubMillimeter Array (SMA) and Very Large Array (VLA) to observe the asteroid from wavelengths of 1 mm to 7 cm. We will present the observed brightness temperatures as a function of wavelength, and implications for temperature and physical state of the surface and near-surface. [1] Delbo et al. 2007, Icarus, 190, 236. [2] Muller et al. 2007, IAUS 236, 261. [3] Trilling et al. 2010, AJ, 140, 770.

Realization of Intrinsically Stretchable Organic Solar Cells Enabled by Charge-Extraction Layer and Photoactive Material Engineering.

PubMed

Hsieh, Yun-Ting; Chen, Jung-Yao; Fukuta, Seijiro; Lin, Po-Chen; Higashihara, Tomoya; Chueh, Chu-Chen; Chen, Wen-Chang

2018-06-12

The rapid development of wearable electronic devices has prompted a strong demand to develop stretchable organic solar cells (OSCs) to serve as the advanced powering systems. However, to realize an intrinsically stretchable OSC is challenging because it requires all the constituent layers to possess certain elastic properties. It thus necessitates a combined engineering of charge-transporting layers and photoactive materials. Herein, we first describe a stretchable electron-extraction layer using a blend of poly[(9,9-bis(3'-( N, N-dimethylamino)propyl)-2,7-fluorene)- alt-2,7-(9,9-dioctylfluorene)] (PFN) and nitrile butadiene rubber (NBR, Nipol 1072). This hybrid PFN/NBR layer exhibits a much lower Derjaguin-Muller-Toporov modulus (0.45 GPa) than the value (1.25 GPa) of the pristine PFN and could withstand a high strain (60% strain) without showing any cracks. Moreover, besides enriching the stretchability of PFN, the terminal carboxyl groups of NBR can ionize PFN to promote its solution-processability in polar solvents and to ensure the interfacial dipole formation at the corresponding interface in the device, as evidenced by the Fourier transform infrared and ultraviolet photoelectron spectroscopy analyses. By further coupling the replacement of [6,6]-phenyl-C 61 -butyric acid methyl ester (PCBM) with nonfullerene acceptors owing to better mechanical stretchability in the photoactive layer, OSCs with improved intrinsically stretchability and performance were demonstrated. An all-polymer OSC can exhibit a power conversion efficiency of 2.82% after 10% stretching, surpassing the PCBM-based device that can only withstand 5% strain.

Good Trellises for IC Implementation of Viterbi Decoders for Linear Block Codes

NASA Technical Reports Server (NTRS)

Moorthy, Hari T.; Lin, Shu; Uehara, Gregory T.

1997-01-01

This paper investigates trellis structures of linear block codes for the integrated circuit (IC) implementation of Viterbi decoders capable of achieving high decoding speed while satisfying a constraint on the structural complexity of the trellis in terms of the maximum number of states at any particular depth. Only uniform sectionalizations of the code trellis diagram are considered. An upper-bound on the number of parallel and structurally identical (or isomorphic) subtrellises in a proper trellis for a code without exceeding the maximum state complexity of the minimal trellis of the code is first derived. Parallel structures of trellises with various section lengths for binary BCH and Reed-Muller (RM) codes of lengths 32 and 64 are analyzed. Next, the complexity of IC implementation of a Viterbi decoder based on an L-section trellis diagram for a code is investigated. A structural property of a Viterbi decoder called add-compare-select (ACS)-connectivity which is related to state connectivity is introduced. This parameter affects the complexity of wire-routing (interconnections within the IC). The effect of five parameters namely: (1) effective computational complexity; (2) complexity of the ACS-circuit; (3) traceback complexity; (4) ACS-connectivity; and (5) branch complexity of a trellis diagram on the very large scale integration (VISI) complexity of a Viterbi decoder is investigated. It is shown that an IC implementation of a Viterbi decoder based on a nonminimal trellis requires less area and is capable of operation at higher speed than one based on the minimal trellis when the commonly used ACS-array architecture is considered.

Occurrence and antibacterial susceptibility pattern of bacterial pathogens isolated from diarrheal patients in Pakistan.

PubMed

Rasool, Muhammad H; Siddique, Abu B; Saqalein, Muhammad; Asghar, Muhammad J; Zahoor, Muhammad A; Aslam, Bilal; Shafiq, Humerah B; Nisar, Muhammad A

2016-03-01

To determine the occurrence of bacterial pathogens responsible for diarrhea and to engender information regarding the effectiveness of commonly used antibiotic against diarrhea. This cross-sectional study was conducted between April and July 2014. Samples were collected from the Divisional Headquarter and Allied Hospital, Faisalabad, Pakistan. The differential and selective media were used to isolate bacterial pathogens, which were identified through cultural characteristics, microscopy, and biochemical tests. Disc diffusion assay was carried out using Muller Hinton agar medium, and minimum inhibitory concentration was determined using broth dilution method against isolated pathogens. One hundred and forty-one (100%) samples were positive for some bacteria. Frequency of occurrence was Bacillus cereus (B. cereus) (66%), Escherichia coli (E.coli) (48.5%), Salmonella typhi (S. Typhi) (27.7%), Pseudomonas aeruginosa (P. aeruginosa) (8.5%), and Staphylococcus aureus (S. aureus) (4.3%). Single pathogen was detected in 20 (14.2%) samples whereas combinations were found in 121 (85.8%) samples. Bacillus cereus and E.coli were the most frequently detected pathogens followed by the S. Typhi, P. aeruginosa, and Staph. aureus. The percentage occurrence of isolated pathogens was 31% in B. cereus, 31% in E. coli, 18% in S. Typhi, 5% in P. aeruginosa, and 3% in Staph. aureus. Pseudomonas aeruginosa showed resistance against Amoxicillin and Cefotaxime, whereas S. aureus was found resistant against Cefotaxime. Statistical analysis using one way Analysis of Variance revealed that Ofloxacin and Gentamicin had significant (p less than 0.05) differences against all isolates as compared with other antibiotics used in this study.

A proposed experimental test to distinguish waves from 2-D turbulence

NASA Technical Reports Server (NTRS)

Dewan, E. M.

1986-01-01

A theory of buoyancy range turbulence that leads to a unique scale, K sub B, that allows one to differentiate between waves and turbulence for the special case of theta = 0 (i.e., horizontally propagating waves) is discussed. The theory does not seem to lead to a practical empirical distinction for the general situation. This is due to the fact that, as theta is increased, one has the ever-increasing presence of BRT for longer wavelengths. The fact that the numerical values of epsilon prime are not yet available compounds the difficulty. In addition, it does not appear possible to encompass true 2-D turbulence in the theory. We are thus driven to a test which circumvents all these difficulties. A proposed test is based on the idea that waves are coherent and propagate, while in turbulence we have the opposite situation. In particular, the test is suggested by the following quotation from MULLER (1984), on the nature of such turbulence: The turbulence in each horizontal plane is independent from the turbulence in the other planes. If this statement were to be taken literally, it would imply that the temporal coherence between horizontal speeds, separated only in altitude, would be zero. Any vertical separation would be forced to take into account the effects of viscosity: that is to say, a specific finite vertical separation would be needed to destroy coherence. In order to estimate this distance, L, one can use L = C(v/S) (1/2) were v is the kinematic viscosity, S is the shear scale, and C is a constant of order unity.

Genome scan of hybridizing sunflowers from Texas (Helianthus annuus and H. debilis) reveals asymmetric patterns of introgression and small islands of genomic differentiation.

PubMed

Scascitelli, M; Whitney, K D; Randell, R A; King, Matthew; Buerkle, C A; Rieseberg, L H

2010-02-01

Although the sexual transfer of genetic material between species (i.e. introgression) has been documented in many groups of plants and animals, genome-wide patterns of introgression are poorly understood. Is most of the genome permeable to interspecific gene flow, or is introgression typically restricted to a handful of genomic regions? Here, we assess the genomic extent and direction of introgression between three sunflowers from the south-central USA: the common sunflower, Helianthus annuus ssp. annuus; a near-endemic to Texas, Helianthus debilis ssp. cucumerifolius; and their putative hybrid derivative, thought to have recently colonized Texas, H. annuus ssp. texanus. Analyses of variation at 88 genetically mapped microsatellite loci revealed that long-term migration rates were high, genome-wide and asymmetric, with higher migration rates from H. annuus texanus into the two parental taxa than vice versa. These results imply a longer history of intermittent contact between H. debilis and H. annuus than previously believed, and that H. annuus texanus may serve as a bridge for the transfer of alleles between its parental taxa. They also contradict recent theory suggesting that introgression should predominantly be in the direction of the colonizing species. As in previous studies of hybridizing sunflower species, regions of genetic differentiation appear small, whether estimated in terms of FST or unidirectional migration rates. Estimates of recent immigration and admixture were inconsistent, depending on the type of analysis. At the individual locus level, one marker showed striking asymmetry in migration rates, a pattern consistent with tight linkage to a Bateson-Dobzhansky-Muller incompatibility.

Color in present culture of European architecture

NASA Astrophysics Data System (ADS)

Schindler, Verena M.

2002-06-01

The influential architect Le Corbusier (1887 - 1965) was also involved in the adventure of contemporary painting, and color occupied half of his day, during twenty years, as he revealed in a study entitled 'Architectural Polychromy' written in the early thirties and recently published in 1997. In the present, contemporary architects in Central Europe are dealing with color in quite a different and exceptional way: most of them engage the artist to collaborate with them in their architectural projects. If painting is concerned with the interaction of color in the two-dimensional plane, architecture is deeply dependent on light and space, and deals entirely with the three- dimensional environment and its human perception. In the 1990s, the way architects and artists employed color in architecture was so striking that color offered a key to larger discussions and opened up an interesting aspect of architectural practice. It must be remembered that recent housing projects, such as the housing estate Pilotengasse in Vienna, Gigon & Guyer's Broelberg in Kilchberg (with Harald F. Muller), next to Zurich, and their Sport Center in Davos (with Adrian Schiess), Jean Nouvel's Cultural and Congress Center in Lucerne, or Sauerbruch & Hutton's Photonic Center and their GSW office building in Berlin have all been contributing to free color from its unconscious and dormant role. These works all impart qualities to color in architecture that were hitherto reserved to other materials and fields: they define the aspects of the interaction of visual and physical space, of materialization of volumes, and of the expression of wealth and luxury.

Anatomy and development of the macula: specialisation and the vulnerability to macular degeneration.

PubMed

Provis, Jan M; Penfold, Philip L; Cornish, Elisa E; Sandercoe, Trent M; Madigan, Michele C

2005-09-01

The central retina in primates is adapted for high acuity vision. The most significant adaptations to neural retina in this respect are: 1. The very high density of cone photoreceptors on the visual axis; 2. The dominance of Midget pathways arising from these cones and 3. The diminishment of retinal blood supply in the macula, and its absence on the visual axis. Restricted blood supply to the part of the retina that has the highest density of neural elements is paradoxical. Inhibition of vascular growth and proliferation is evident during foetal life and results in metabolic stress in ganglion cells and Muller cells, which is resolved during formation of the foveal depression. In this review we argue that at the macula stressed retinal neurons adapt during development to a limited blood supply from the choriocapillaris, which supplies little in excess of metabolic demand of the neural retina under normal conditions. We argue also that while adaptation of the choriocapillaris underlying the foveal region may initially augment the local supply of oxygen and nutrients by diffusion, in the long term these adaptations make the region more vulnerable to age-related changes, including the accumulation of insoluble material in Bruch's membrane and beneath the retinal pigment epithelium. These changes eventually impact on delivery of oxygen and nutrients to the RPE and outer neural retina because of reduced flow in the choriocapillaris and the increasing barriers to effective diffusion. Both the inflammatory response and the sequelae of oxidative stress are predictable outcomes in this scenario.

Ir-192 HDR transit dose and radial dose function determination using alanine/EPR dosimetry

NASA Astrophysics Data System (ADS)

Guzmán Calcina, Carmen S.; de Almeida, Adelaide; Oliveira Rocha, José R.; Abrego, Felipe Chen; Baffa, Oswaldo

2005-03-01

Source positioning close to the tumour in high dose rate (HDR) brachytherapy is not instantaneous. An increment of dose will be delivered during the movement of the source in the trajectory to its static position. This increment is the transit dose, often not taken into account in brachytherapeutic treatment planning. The transit dose depends on the prescribed dose, number of treatment fractions, velocity and activity of the source. Combining all these factors, the transit dose can be 5% higher than the prescribed absorbed dose value (Sang-Hyun and Muller-Runkel, 1994 Phys. Med. Biol. 39 1181 8, Nath et al 1995 Med. Phys. 22 209 34). However, it cannot exceed this percentage (Nath et al 1995). In this work, we use the alanine-EPR (electron paramagnetic resonance) dosimetric system using analysis of the first derivative of the signal. The transit dose was evaluated for an HDR system and is consistent with that already presented for TLD dosimeters (Bastin et al 1993 Int. J. Radiat. Oncol. Biol. Phys. 26 695 702). Also using the same dosimetric system, the radial dose function, used to evaluate the geometric dose degradation around the source, was determined and its behaviour agrees better with those obtained by Monte Carlo simulations (Nath et al 1995, Williamson and Nath 1991 Med. Phys. 18 434 48, Ballester et al 1997 Med. Phys. 24 1221 8, Ballester et al 2001 Phys. Med. Biol. 46 N79 90) than with TLD measurements (Nath et al 1990 Med. Phys. 17 1032 40).

Ir-192 HDR transit dose and radial dose function determination using alanine/EPR dosimetry.

PubMed

Calcina, Carmen S Guzmán; de Almeida, Adelaide; Rocha, José R Oliveira; Abrego, Felipe Chen; Baffa, Oswaldo

2005-03-21

Source positioning close to the tumour in high dose rate (HDR) brachytherapy is not instantaneous. An increment of dose will be delivered during the movement of the source in the trajectory to its static position. This increment is the transit dose, often not taken into account in brachytherapeutic treatment planning. The transit dose depends on the prescribed dose, number of treatment fractions, velocity and activity of the source. Combining all these factors, the transit dose can be 5% higher than the prescribed absorbed dose value (Sang-Hyun and Muller-Runkel, 1994 Phys. Med. Biol. 39 1181-8, Nath et al 1995 Med. Phys. 22 209-34). However, it cannot exceed this percentage (Nath et al 1995). In this work, we use the alanine-EPR (electron paramagnetic resonance) dosimetric system using analysis of the first derivative of the signal. The transit dose was evaluated for an HDR system and is consistent with that already presented for TLD dosimeters (Bastin et al 1993 Int. J. Radiat. Oncol. Biol. Phys. 26 695-702). Also using the same dosimetric system, the radial dose function, used to evaluate the geometric dose degradation around the source, was determined and its behaviour agrees better with those obtained by Monte Carlo simulations (Nath et al 1995, Williamson and Nath 1991 Med. Phys. 18 434-48, Ballester et al 1997 Med. Phys. 24 1221-8, Ballester et al 2001 Phys. Med. Biol. 46 N79-90) than with TLD measurements (Nath et al 1990 Med. Phys. 17 1032-40).

Assessment of a topical product based on a mixture of polysulfated galactosaminoglycan in the topical treatment of postoperative blood extravasation (ecchymosis-hematoma) in phlebology.

PubMed

Izzo, Marcello; Coscia, Vincenzo

2018-08-01

The onset of bruising in surgery is a frequent event that can be a source of complications and delays in the patient's healing process (pigmentations, fibrosis, etc.). Having the help of an effective topical product that speeds up the resorption of blood extravasation can be an advantage in phlebological surgery and surgery in general. Twenty-three patients both male and female (age range: 30-72 years) were enrolled. Twenty-two of them completed the study, all underwent venous surgery of the lower extremities (invagination stripping of the internal or external saphenous and Muller's ambulatory phlebectomy). The 22 patients were divided into 2 groups of 11 each and in a single blind study received topical daily therapy (every 12 hours) either in the form of a medication cream (active ingredient), or a placebo cream. All patients wore compression one-leg tights immediately after surgery, following measurement of the lower limb (Struva® 35 mmHg, Medi Italia, Zola Predosa, Bologna, Italy). The 30-day observational study was carried out using a standard photographic survey procedure. The topical application of polysulfated galactosaminoglycan showed a significantly higher rate of resorption of blood extravasations than in patients in the single blind study receiving topical therapy with the placebo (Fisher's Exact Test, dichotomous variable outcome, N.=22, with result P=0.0001<0.05). Topical therapy with a mixture of polysulfated galactosaminoglycans provides valid protection in the therapy of blood extravasations in phlebology and general surgery.

The internal gravity wave spectrum in two high-resolution global ocean models

NASA Astrophysics Data System (ADS)

Arbic, B. K.; Ansong, J. K.; Buijsman, M. C.; Kunze, E. L.; Menemenlis, D.; Müller, M.; Richman, J. G.; Savage, A.; Shriver, J. F.; Wallcraft, A. J.; Zamudio, L.

2016-02-01

We examine the internal gravity wave (IGW) spectrum in two sets of high-resolution global ocean simulations that are forced concurrently by atmospheric fields and the astronomical tidal potential. We analyze global 1/12th and 1/25th degree HYCOM simulations, and global 1/12th, 1/24th, and 1/48th degree simulations of the MITgcm. We are motivated by the central role that IGWs play in ocean mixing, by operational considerations of the US Navy, which runs HYCOM as an ocean forecast model, and by the impact of the IGW continuum on the sea surface height (SSH) measurements that will be taken by the planned NASA/CNES SWOT wide-swath altimeter mission. We (1) compute the IGW horizontal wavenumber-frequency spectrum of kinetic energy, and interpret the results with linear dispersion relations computed from the IGW Sturm-Liouville problem, (2) compute and similarly interpret nonlinear spectral kinetic energy transfers in the IGW band, (3) compute and similarly interpret IGW contributions to SSH variance, (4) perform comparisons of modeled IGW kinetic energy frequency spectra with moored current meter observations, and (5) perform comparisons of modeled IGW kinetic energy vertical wavenumber-frequency spectra with moored observations. This presentation builds upon our work in Muller et al. (2015, GRL), who performed tasks (1), (2), and (4) in 1/12th and 1/25th degree HYCOM simulations, for one region of the North Pacific. New for this presentation are tasks (3) and (5), the inclusion of MITgcm solutions, and the analysis of additional ocean regions.

Eugenics--a side effect of progressivism? analysis of the role of scientific and medical elites in the rise and fall of eugenics in pre-war Poland.

PubMed

Blach, Olga

2010-06-01

The eminent geneticist, Benno Muller-Hill, described eugenics as"explosive mixture between something we might call hard science, that is, human genetics, and the sphere of political action. On the one hand, geneticists needed politicians to implement their ideas. On the other hand, Hitler and the Nazis needed scientists who could say that anti-Semitism has scientific theoretical foundations." For some Polish eugenicists, the Third Reich was not the home of the Nuremberg Laws, but a country that "boldly embarked on racial hygiene." This enthusiastic attitude of Polish intellectual circles towards Nazi eugenic laws was characteristic of the status of pre-war science in Poland, which in many areas, such as anthropology and psychiatry, remained strongly influenced by the paradigm of German science. While the professional and scientific context of the day promoted eugenic and racist ideas within the framework of the academic milieu and the curriculum of the medical and scientific community, eugenicists in Poland tended to refrain from anti-Semitic and racist phraseology. Indeed, the Polish eugenic movement was class- rather than race-orientated. The hybrid language of eugenics, combining social sensitivity with repulsion and contempt for the sick and the weak, illustrated the ambiguous stance of the Polish eugenicists on politics and science in Nazi Germany, for the Third Reich provided the German eugenicists with what had always been an unfulfilled dream to the Polish eugenicists--political power and the ability to implement their ideas.

High accuracy operon prediction method based on STRING database scores.

PubMed

Taboada, Blanca; Verde, Cristina; Merino, Enrique

2010-07-01

We present a simple and highly accurate computational method for operon prediction, based on intergenic distances and functional relationships between the protein products of contiguous genes, as defined by STRING database (Jensen,L.J., Kuhn,M., Stark,M., Chaffron,S., Creevey,C., Muller,J., Doerks,T., Julien,P., Roth,A., Simonovic,M. et al. (2009) STRING 8-a global view on proteins and their functional interactions in 630 organisms. Nucleic Acids Res., 37, D412-D416). These two parameters were used to train a neural network on a subset of experimentally characterized Escherichia coli and Bacillus subtilis operons. Our predictive model was successfully tested on the set of experimentally defined operons in E. coli and B. subtilis, with accuracies of 94.6 and 93.3%, respectively. As far as we know, these are the highest accuracies ever obtained for predicting bacterial operons. Furthermore, in order to evaluate the predictable accuracy of our model when using an organism's data set for the training procedure, and a different organism's data set for testing, we repeated the E. coli operon prediction analysis using a neural network trained with B. subtilis data, and a B. subtilis analysis using a neural network trained with E. coli data. Even for these cases, the accuracies reached with our method were outstandingly high, 91.5 and 93%, respectively. These results show the potential use of our method for accurately predicting the operons of any other organism. Our operon predictions for fully-sequenced genomes are available at http://operons.ibt.unam.mx/OperonPredictor/.

A clinical, dermoscopic, and histopathological study of Dermatosis Papulosa Nigra (DPN) - An Indian perspective.

PubMed

Bhat, Ramesh M; Patrao, Ninon; Monteiro, Rochelle; Sukumar, D

2017-09-01

Dermatosis papulosa nigra (DPN) is a benign cutaneous condition which commonly occurs in dark-skinned people, especially Asians and African Americans. Owing to its benign nature and rarity, very few studies have been conducted to date, and dermoscopic studies are practically nonexistent. To study the clinical and epidemiological characteristics of patients with dermatosis papulosa nigra (DPN) and to correlate the clinical findings with dermoscopic and histopathological findings in DPN. A total of 100 patients attending the Dermatology outpatient department at Father Muller Medical College, Mangalore, India, with clinically diagnosed dermatosis papulosa nigra were included in the study. Histopathology and dermoscopic evaluation of the lesions were done, and the characteristics seen were noted. Earlier onset of lesions was noted in our study, i.e. onset in the 4th decade as compared to the 6th decade in most other studies. A female preponderance, positive family history, history of sun exposure, and involvement of the head and neck were other significant associations. Histopathology revealed an acanthotic variant in all the lesions that were biopsied. The predominant dermoscopic finding was fissures and ridges of the cerebriform pattern followed by comedo-like openings. Dermatosis papulosa nigra is a benign unaesthetic condition seen in Fitzpatrick skin types IV-VI. The diagnosis is mainly clinical; however, in a few cases histopathology and dermoscopy aid in differentiating it from other benign and malignant tumors. Dermoscopy, in particular, being a noninvasive investigative moiety is a rapid and accurate diagnostic tool. © 2017 The International Society of Dermatology.

Good trellises for IC implementation of viterbi decoders for linear block codes

NASA Technical Reports Server (NTRS)

Lin, Shu; Moorthy, Hari T.; Uehara, Gregory T.

1996-01-01

This paper investigates trellis structures of linear block codes for the IC (integrated circuit) implementation of Viterbi decoders capable of achieving high decoding speed while satisfying a constraint on the structural complexity of the trellis in terms of the maximum number of states at any particular depth. Only uniform sectionalizations of the code trellis diagram are considered. An upper bound on the number of parallel and structurally identical (or isomorphic) subtrellises in a proper trellis for a code without exceeding the maximum state complexity of the minimal trellis of the code is first derived. Parallel structures of trellises with various section lengths for binary BCH and Reed-Muller (RM) codes of lengths 32 and 64 are analyzed. Next, the complexity of IC implementation of a Viterbi decoder based on an L-section trellis diagram for a code is investigated. A structural property of a Viterbi decoder called ACS-connectivity which is related to state connectivity is introduced. This parameter affects the complexity of wire-routing (interconnections within the IC). The effect of five parameters namely: (1) effective computational complexity; (2) complexity of the ACS-circuit; (3) traceback complexity; (4) ACS-connectivity; and (5) branch complexity of a trellis diagram on the VLSI complexity of a Viterbi decoder is investigated. It is shown that an IC implementation of a Viterbi decoder based on a non-minimal trellis requires less area and is capable of operation at higher speed than one based on the minimal trellis when the commonly used ACS-array architecture is considered.

VizieR Online Data Catalog: Spectroscopically Identified Hot Subdwarf Stars (Kilkenny+ 1988)

NASA Astrophysics Data System (ADS)

Kilkenny, D.; Heber, U.; Drilling, J. S.

1996-05-01

Prior to 1986 there were around 200 spectroscopically classified hot subdwarf stars. The Palomar-Green survey (Green et al., 1986ApJS...61..305G) detected over 900 hot subdwarfs, mostly in the North Galactic Cap and mostly previously unknown objects; the Kitt-Peak_Downes survey found another 60 near the Galactic Plane (Downes, 1986ApJS...61..569D). These form the basis of the present catalog but new subdwarfs are continually being found by spectroscopic surveys of photographically discovered faint blue star samples; examples are the work of Wegner and his co-workers on the Kiso survey (Wegner et al., 1985AJ.....90.1511W, 1986AJ.....91..139W, 1987AJ.....94.1271W) and of Kilkenny and Muller (1987) on southern discoveries by Luyten and collaborators (e.g. Haro and Luyten, 1962, Cat. III/74; Luyten and Anderson, 1958, 1959, 1967, "A Search for Faint Blue Stars"). Only stars for which a spectroscopic classification exists have been included. There is a significant probability that stars with only photometric classifications can be normal high-latitude B stars, white dwarfs or cataclysmic variable, for example. Hot subdwarfs in binary systems have been included but not planetary nebulae nuclei classified 'sd' since the latter have been catalogued elsewhere. Although there is not a universally accepted classification scheme for hot subdwarfs, it is fairly clear that the main criterion is a surface gravity higher than that of hot main sequence stars but less than that of hot white dwarfs. Also, hot subdwarf stars typically show helium abundance anomalies. (3 data files).

Microwave-assisted generation of standard gas mixtures.

PubMed

Xiong, Guohua; Pawliszyn, Janusz

2002-05-15

Microwave heating was employed for preparation of the standard gas of volatile organic compounds (VOCs) and semivolatile organic compounds (semi-VOCs) by using a 1000 W commercial domestic microwave oven and 1 L gas-sampling bulbs. The VOCs investigated were benzene, chloroform, 1,3-dichlorobenzene, tetrachloroethylene, toluene, and 1,1,2-trichloroethane, and the semi-VOCs used were the polychlorinated biphenyls (PCBs) PCB 1016 and PCB 1248. Since these weakly or nonpolar molecules are very poor absorbers of microwave energy, an appropriate amount of water was introduced to accept microwave radiation and act as the thermal source to accelerate their evaporation. The glass bulb may also contribute thermal energy to the VOCs/semi-VOCs by accepting microwave energy to a small degree. For 0.5 microL of liquid VOCs on 10 mg of glass wool, it was shown that 15 microL of H2O and 60 s of microwave heating yielded a very efficient evaporation [97.2-106.4%, compared with a classic method (Muller, L; Gorecki, T.; Pawliszyn, J. Fresenius' J. Anal. Chem. 1999, 364, 610-616)]. For 1 microL of PCB solution (1000 microg/mL in hexane), 15 microL of H2O and 90 s of microwave heating also provided a complete evaporation. The addition of water was particularly significant for microwave-assisted evaporation of PCBs because semi-VOCs are much more difficult to evaporate than VOCs. This developed microwave technique proved to be quite simple, powerful, rapid, accurate, and safe for the preparation of VOC/semi-VOC standard gas. Solid- phase microextraction combined with gas chromatography was used for the gas analysis.

[Autolytinae, Eusyllinae an Exogoninae (Syllidae: Polychaeta) from Coiba National Park, Panama)].

PubMed

Capa, M; San Martín, G; López, E

2001-06-01

This is the second paper on the Syllidae (Polychaeta) from hard substrata of the Coiba National Park (Pacific coast of Panama) (the first paper treated Syllinae). On this second paper nineteen species belonging to eleven genera of the subfamilies Autolytinae, Eusyllinae and Exogoninae (Syllidae: Polychaeta) are reported. The samples were collected by SCUBA diving, either by removing 4 kg blocks of dead coral (Pocillopora spp.) or scraping off 25 x 25 cm quadrats of Telesto multiflora or algae (Dyctiota cf. flavellata, Padina cf. durvillaei and another currently unidentified species). They were collected during four expeditions carried out between 1996 and 1998. Four species are newly reported for the Eastern Pacific: Eusyllis lamelligera Marion & Bobretzky, 1875, Exogone exmouthensis Hartmann-Schröder, 1980, Proceraea cf. cornuta (Agassiz, 1863) and Sphaerosyllis (S.) magnidentata Perkins, 1981. Ten species are reported for the first time from the Central America Pacific coast: Amblyosyllis cf. granosa Ehlers, 1897 (sensu Westheide 1974), Amblyosyllis speciosa Izuka, 1912, Autolytus multidenticulatus Westheide, 1974, Exogone naidinoides Westheide, 1974, Grubeosyllis concinna (Westheide, 1974), Odontosyllis fulgurans (Audouin & Milne Edward, 1833), Opisthodonta mitchelli Kudenov & Harris, 1995, Pionosyllis articulata Kudenov & Harris, 1995, Sphaerosyllis (S.) californiensis Hartman, 1966 and Syllides cf. reishi Dorsey, 1978. The family Syllidae is represented in the Coiba National Park by 14% of cosmopolitan species, 14% of circumtropical species, 22% of Atlantic and Pacific species and 25% of Pacific species restricted to warm waters. In samples of dead coral the dominant species are S. armillaris (Muller, 1771) and S. gracilis (Campoy, 1982); in samples of telestaceans Grubeosyllis concinna dominates.

Ascus dysgenesis in hybrid crosses of Neurospora and Sordaria (Sordariaceae).

PubMed

Kasbekar, Durgadas P

2017-07-01

When two lineages derived from a common ancestor become reproductively isolated (e.g. Neurospora crassa and N. tetrasperma), genes that have undergone mutation and adaptive evolution in one lineage can potentially become dysfunctional when transferred into the other, since other genes have undergone mutation and evolution in the second lineage, and the derived alleles were never 'tested' together before hybrid formation. Bateson (1909), Dobzhansky (1936), and Muller (1942) recognized that incompatibility between the derived alleles could potentially make the hybrid lethal, sterile, or display some other detriment. Alternatively, the detrimental effects seen in crosses with the hybrids may result from the silencing of ascus-development genes by meiotic silencing by unpaired DNA (MSUD). Aberrant transcripts from genes improperly paired in meiosis are processed into single-stranded MSUD-associated small interfering RNA (masiRNA), which is used to degrade complementary mRNA. Recently, backcrosses of N. crassa / N. tetrasperma hybrid translocation strains with wild-type N. tetrasperma were found to elicit novel ascus dysgenesis phenotypes. One was a transmission ratio distortion that apparently disfavoured the homokaryotic ascospores formed following alternate segregation. Another was the production of heterokaryotic ascospores in eight-spored asci. Lewis (1969) also had reported sighting rare eight-spored asci with heterokaryotic ascospores in interspecific crosses in Sordaria, a related genus. Ordinarily, in both Neurospora and Sordaria, the ascospores are partitioned at the eight-nucleus stage, and ascospores in eight-spored asci are initially uninucleate. Evidently, in hybrid crosses of the family Sordariaceae, ascospore partitioning can be delayed until after one or more mitoses following the postmeiotic mitosis.

Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Polyethylene Reflected Pulse of the CEA Valduc SILENE Critical Assembly

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Thomas Martin; Celik, Cihangir; McMahan, Kimberly L.

This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 19, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). Themore » goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube and the Rocky Flats detects neutrons via charged particles produced in a thin 6LiF disc depositing energy in a Si solid state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.« less

Neutron Activation Foil and Thermoluminescent Dosimeter Responses to a Lead Reflected Pulse of the CEA Valduc SILENE Critical Assembly

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Thomas Martin; Celik, Cihangir; Isbell, Kimberly McMahan

This benchmark experiment was conducted as a joint venture between the US Department of Energy (DOE) and the French Commissariat à l'Energie Atomique (CEA). Staff at the Oak Ridge National Laboratory (ORNL) in the US and the Centre de Valduc in France planned this experiment. The experiment was conducted on October 13, 2010 in the SILENE critical assembly facility at Valduc. Several other organizations contributed to this experiment and the subsequent evaluation, including CEA Saclay, Lawrence Livermore National Laboratory (LLNL), the Y-12 National Security Complex (NSC), Babcock International Group in the United Kingdom, and Los Alamos National Laboratory (LANL). Themore » goal of this experiment was to measure neutron activation and thermoluminescent dosimeter (TLD) doses from a source similar to a fissile solution critical excursion. The resulting benchmark can be used for validation of computer codes and nuclear data libraries as required when performing analysis of criticality accident alarm systems (CAASs). A secondary goal of this experiment was to qualitatively test performance of two CAAS detectors similar to those currently and formerly in use in some US DOE facilities. The detectors tested were the CIDAS MkX and the Rocky Flats NCD-91. The CIDAS detects gammas with a Geiger-Muller tube, and the Rocky Flats detects neutrons via charged particles produced in a thin 6LiF disc, depositing energy in a Si solid-state detector. These detectors were being evaluated to determine whether they would alarm, so they were not expected to generate benchmark quality data.« less

Benefits of a Recombination-Proficient Escherichia coli System for Adaptive Laboratory Evolution.

PubMed

Peabody, George; Winkler, James; Fountain, Weston; Castro, David A; Leiva-Aravena, Enzo; Kao, Katy C

2016-11-15

Adaptive laboratory evolution typically involves the propagation of organisms asexually to select for mutants with the desired phenotypes. However, asexual evolution is prone to competition among beneficial mutations (clonal interference) and the accumulation of hitchhiking and neutral mutations. The benefits of horizontal gene transfer toward overcoming these known disadvantages of asexual evolution were characterized in a strain of Escherichia coli engineered for superior sexual recombination (genderless). Specifically, we experimentally validated the capacity of the genderless strain to reduce the mutational load and recombine beneficial mutations. We also confirmed that inclusion of multiple origins of transfer influences both the frequency of genetic exchange throughout the chromosome and the linkage of donor DNA. We built a simple kinetic model to estimate recombination frequency as a function of transfer size and relative genotype enrichment in batch transfers; the model output correlated well with the experimental data. Our results provide strong support for the advantages of utilizing the genderless strain over its asexual counterpart during adaptive laboratory evolution for generating beneficial mutants with reduced mutational load. Over 80 years ago Fisher and Muller began a debate on the origins of sexual recombination. Although many aspects of sexual recombination have been examined at length, experimental evidence behind the behaviors of recombination in many systems and the means to harness it remain elusive. In this study, we sought to experimentally validate some advantages of recombination in typically asexual Escherichia coli and determine if a sexual strain of E. coli can become an effective tool for strain development. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Benefits of a Recombination-Proficient Escherichia coli System for Adaptive Laboratory Evolution

PubMed Central

Peabody, George; Winkler, James; Fountain, Weston; Castro, David A.; Leiva-Aravena, Enzo

2016-01-01

ABSTRACT Adaptive laboratory evolution typically involves the propagation of organisms asexually to select for mutants with the desired phenotypes. However, asexual evolution is prone to competition among beneficial mutations (clonal interference) and the accumulation of hitchhiking and neutral mutations. The benefits of horizontal gene transfer toward overcoming these known disadvantages of asexual evolution were characterized in a strain of Escherichia coli engineered for superior sexual recombination (genderless). Specifically, we experimentally validated the capacity of the genderless strain to reduce the mutational load and recombine beneficial mutations. We also confirmed that inclusion of multiple origins of transfer influences both the frequency of genetic exchange throughout the chromosome and the linkage of donor DNA. We built a simple kinetic model to estimate recombination frequency as a function of transfer size and relative genotype enrichment in batch transfers; the model output correlated well with the experimental data. Our results provide strong support for the advantages of utilizing the genderless strain over its asexual counterpart during adaptive laboratory evolution for generating beneficial mutants with reduced mutational load. IMPORTANCE Over 80 years ago Fisher and Muller began a debate on the origins of sexual recombination. Although many aspects of sexual recombination have been examined at length, experimental evidence behind the behaviors of recombination in many systems and the means to harness it remain elusive. In this study, we sought to experimentally validate some advantages of recombination in typically asexual Escherichia coli and determine if a sexual strain of E. coli can become an effective tool for strain development. PMID:27613685

A Chromosome-Scale Assembly of the Bactrocera cucurbitae Genome Provides Insight to the Genetic Basis of white pupae

PubMed Central

Sim, Sheina B.; Geib, Scott M.

2017-01-01

Genetic sexing strains (GSS) used in sterile insect technique (SIT) programs are textbook examples of how classical Mendelian genetics can be directly implemented in the management of agricultural insect pests. Although the foundation of traditionally developed GSS are single locus, autosomal recessive traits, their genetic basis are largely unknown. With the advent of modern genomic techniques, the genetic basis of sexing traits in GSS can now be further investigated. This study is the first of its kind to integrate traditional genetic techniques with emerging genomics to characterize a GSS using the tephritid fruit fly pest Bactrocera cucurbitae as a model. These techniques include whole-genome sequencing, the development of a mapping population and linkage map, and quantitative trait analysis. The experiment designed to map the genetic sexing trait in B. cucurbitae, white pupae (wp), also enabled the generation of a chromosome-scale genome assembly by integrating the linkage map with the assembly. Quantitative trait loci analysis revealed SNP loci near position 42 MB on chromosome 3 to be tightly linked to wp. Gene annotation and synteny analysis show a near perfect relationship between chromosomes in B. cucurbitae and Muller elements A–E in Drosophila melanogaster. This chromosome-scale genome assembly is complete, has high contiguity, was generated using a minimal input DNA, and will be used to further characterize the genetic mechanisms underlying wp. Knowledge of the genetic basis of genetic sexing traits can be used to improve SIT in this species and expand it to other economically important Diptera. PMID:28450369

Production of Arctic Sea-ice Albedo by fusion of MISR and MODIS data

NASA Astrophysics Data System (ADS)

Kharbouche, Said; Muller, Jan-Peter

2017-04-01

We have combined data from the NASA MISR and MODIS spectro-radiometers to create a cloud-free albedo dataset specifically for sea-ice. The MISR (Multi-Angular Spectro-Radiometer) instrument on board Terra satellite has a unique ability to create high-quality Bidirectional Reflectance (BRF) over a 7 minute time interval per single overpass, thanks to its 9 cameras of different view angles (±70°,±60°,±45°,±26°). However, as MISR is limited to narrow spectral bands (443nm, 555nm, 670nm, 865nm), which is not sufficient to mask cloud effectively and robustly, we have used the sea-ice mask MOD09 product (Collection 6) from MODIS (Moderate resolution Imaging Spectoradiometer) instrument, which is also on board Terra satellite and acquiring data simultaneously. Only We have created a new and consistent sea-ice (for Arctic) albedo product that is daily, from 1st March to 22nd September for each and every year between 2000 to 2016 at two spatial grids, 1km x 1km and 5km x 5km in polar stereographic projection. Their analysis is described in a separate report [1]. References [1] Muller & Kharbouche, Variation of Arctic's Sea-ice Albedo between 2000 and 2016 by fusion of MISR and MODIS data. This conference. Acknowledgements This work was supported by www.QA4ECV.eu, a project of European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 607405. We thank our colleagues at JPL and NASA LaRC for processing these data, especially Sebastian Val and Steve Protack.

High resolution CCD spectra of stars in globular clusters. Part 2: Metals and CNO in M71

NASA Technical Reports Server (NTRS)

Leep, E. M.; Oke, J. B.; Wallerstein, G.

1986-01-01

Palomar coude CCD spectra of resolution 0.3 and 0.6 has been used to redetermine abundances in five stars of the relatively metal rich globular cluster M71. The (Fe/H) value is restricted to the limits of -0.6 to -1.0. The largest source of uncertainty is a systematic difference in f-values between those derived via the Holweger-Muller (1974) solar model and the Bell et al. (1976) solar model. If we use absolute f-values measured by the Oxford group (Blackwell et al. 1982) we find Fe/H to lie in the range of -0.6 to -0.75, i.e., as given by using the Bell et al. solar model. The relative abundances of the light elements, i.e., Na through Ca and probably including Ti show an average excess relative to iron of 0.4 dex. The effect of this difference on metal indices derived from broad- and narrow- band photometry is discussed. For three stars we find O/H = -0.6 using absolute f-values. For CN an analysis of individual rotational lines of the 2-0 band of the red system yields lines in the (C/H,N/H) plane that are consistent with either an original C/Fe = N/Fe = 0 or a modest increase in N relative to C due to CN burning and mixing. A search for C-13N was not successful and an uncertain lower limit of C-12/C-13 near 10 was obtained.

EU-FP7-iMARS: analysis of Mars multi-resolution images using auto-coregistration, data mining and crowd source techniques: A Final Report on the very variable surface of Mars

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter; Sidiropoulos, Panagiotis; Tao, Yu; Putri, Kiky; Campbell, Jacqueline; Xiong, Si-Ting; Gwinner, Klaus; Willner, Konrad; Fanara, Lida; Waehlisch, Marita; Walter, Sebastian; Schreiner, Bjoern; Steikert, Ralf; Ivanov, Anton; Cantini, Federico; Wardlaw, Jessica; Sprinks, James; Houghton, Robert; Kim, Jung-Rack

2017-04-01

There has been a revolution in 3D surface imaging of Mars over the last 12 years with systematic stereoscopy from HRSC. Digital Terrain Models (DTMs) and OrthoRectified Images (ORIs) have been produced for almost 50% of the Martian surface. DLR, together with the HRSC science team, produced 3D HRSC mosaic products for large regions comprising around 100 individual strips per region (MC-11E/W). UCL processed full coverage of DTMs over the South Polar Residual Cap (SPRC) and started work on the North Polar Layered Deposits (NPLD). The iMars project has been exploiting this unique set of 3D products as a basemap to co-register NASA imagery going back to the 1970s. UCL have developed an automated processing chain for CTX and HiRISE 3D processing to densify the global HRSC dataset with DTMs down to 18m and 75cm respectively using a modification of the open source NASA Ames Stereo Pipeline [1]. 1542 CTX DTMs + ORIs were processed using the Microsoft Azure® cloud and an in-house linux cluster. It is planned to process around 10% of the total HiRISE stereo-DTMs before the end of the project. A fully Automated Co-Registration and Orthorectification (ACRO) system has been developed at UCL and applied to the production of around some 15,000 NASA images. These were co-registered co-registered to a HRSC pixel (typically 12.5m/pixel) and orthorectified to HRSC DTMs of 50-150m spacing [2] over MC-11E/W. All of these new products images are viewable through an OGC-compliant webGIS developed at FUB,. This includes tools for viewing temporal sequences of co-registered ORIs over the same area [3]. Corresponding MARSIS and SHARAD data can be viewed through a QGIS plugin made publicly available [4]. An automated data mining system has been developed at UCL [5] for change detection to search and classify features in images going back to Viking Orbiter of IFoV ≤100m. In parallel, a citizen science project at Nottingham University [6] has defined training samples for classification of change features and eventually for verification of change [7]. Scientific applications include change mapping over MC11E/W, the SPRC [8], mass movements near the North Pole [9]; dark streaks [10] CRISM mapping of mineralogy of dust in the SPRC "Swiss cheese" layers [11] and mapping of dune movement [12]. Examples of some of these will be shown. [1] Tao, Y. & J.-P. Muller LPSC16-2074; [2] Gwinner, K. et al. EPSC15-672; [3] Walter, S. et al. LPSC17-508; [4] Ivanov, A. & Cantini, F. EPSC16; [5] Sidiropoulos, P. & J.-P. Muller EPSC16; [6] Sprinks et al. EPSC16; [7] Wardlaw et al. EPSC16; [8] Putri et al., EPSC16;[9] Fanara, L. et al. LPSC16-2710; [10] Schreiner, B. et al., EPSC16; [11] Campbell, J.et al., EPSC16;[12] Kim, J-R., et al., EPSC16; Acknowledgements This research has received funding from the EU's FP7 Programme under iMars 607379. Partial support is also provided from the STFC Grant ST/K000977/1. iMars thanks the HRSC Experiment team at DLR, Institute of Planetary Research, Berlin, and at Freie Universität Berlin, the HRSC Science Team, as well as the Mars Express Project teams at ESTEC, ESOC, and ESAC for their successful planning, acquisition, and release of image data to the community.

Unus pro omnibus, omnes pro uno: A novel, evidence-based, unifying theory for the pathogenesis of endometriosis.

PubMed

Laganà, Antonio Simone; Vitale, Salvatore Giovanni; Salmeri, Francesca Maria; Triolo, Onofrio; Ban Frangež, Helena; Vrtačnik-Bokal, Eda; Stojanovska, Lily; Apostolopoulos, Vasso; Granese, Roberta; Sofo, Vincenza

2017-06-01

The theory of retrograde menstruation as aetiopathogenesis of endometriosis formulated by John Sampson in 1927 shows clear shortcomings: this does not explain why retrograde menstruation is a physiological process that affects 90% of women, while endometriosis occurs in only 10% of cases; it also does not explain the endometriotic foci distant from the pelvis, nor explains the cases of endometriosis in male patients. The immunological alterations of the peritoneal fluid explains the effects of disease, such as the inhibition of the physiological processes of cytolysis, but does not explain the cause. There is evidence to support the hypothesis that ectopic müllerian remnants of the endometrium, endocervix and endosalpinx are items from the genital ridge leaked during organogenesis. It is known that tissues derived from coelomatic epithelial and mesenchymal cells have the potential to metaplastically differentiate into epithelium and stroma. In addition, the phenotype of the ectopic endometrial cells is significantly different from those ectopic. There is scientific evidence that, during organogenesis, the genes of the Homeobox and Wingless family play a fundamental role in the differentiation of the ducts of Muller and development of the anatomical structure of the urogenital tract. We present here a hypothesis that deregulation of genes and the Wnt signaling pathway Wnt/β-catenin leads to aberrations and deregulation within the mesoderm, thus, may cause aberrant placement of stem cells. In addition, immune cells, adhesion molecules, extracellular matrix metalloproteinase and pro-inflammatory cytokines activate/alter peritoneal microenvironment, creating the conditions for differentiation, adhesion, proliferation and survival of ectopic endometrial cells. Copyright © 2017 Elsevier Ltd. All rights reserved.

[Treatment of eyelid retraction in Grave's disease by recession of the levator complex].

PubMed

Fichter, N; Schittkowski, M; Guthoff, R F

2004-11-01

The chronic stage in Grave's orbitopathy is characterised by fibrotic changes within the orbital soft tissues, especially the extraocular muscles. Retraction of the eyelids is a common clinical feature of this phenomenon. To solve this problem several techniques for lengthening the upper eyelid have been described with variable rates of success. In this report we describe our modified Harvey's technique for the correction of upper eyelid retraction which includes a complete recession of the Muller's muscle/levator complex from the tarsal plate without the interposition of a spacer. Finally only the skin and the superficial orbicularis muscle are sutured. We also report about our results with this procedure. 8 patients (1 male, 7 female) with lid retraction in Grave's ophthalmopathy were recorded who had undergone the modified lengthening technique by an external approach between 2001 and 2004. Four patients underwent a bilateral procedure and 1 patient showed a significant under-correction, necessitating reoperation. So a total of 13 procedures were included in this follow-up study. Beside the common ophthalmological examination, special interest was put in the difference of the two eyelid apertures in primary position pre- and postoperatively. Within a follow-up period of at least 3 months we recorded an averaged lengthening of the upper eyelid of 3.1 mm. The difference of the two eyelid apertures in primary position improved from 2.2 mm preoperatively to 1.0 mm postoperatively. Only 1 patient needed reoperation because of a significant under-correction. There were no late over-corrections observed. The modified Harvey's technique to lengthen the upper eyelid is a safe and effective method to reduce upper eyelid retraction in Grave's disease. An eventually required orbital decompression or extraocular muscle surgery has to be done before the lid surgery.

Correlation of AO and Lauge-Hansen classification systems for ankle fractures to the mechanism of injury.

PubMed

Rodriguez, Edward K; Kwon, John Y; Herder, Lindsay M; Appleton, Paul T

2013-11-01

Our aim was to assess whether the Lauge-Hansen (LH) and the Muller AO classification systems for ankle fractures radiographically correlate with in vivo injuries based on observed mechanism of injury. Videos of potential study candidates were reviewed on YouTube.com. Individuals were recruited for participation if the video could be classified by injury mechanism with a high likelihood of sustaining an ankle fracture. Corresponding injury radiographs were obtained. Injury mechanism was classified using the LH system as supination/external rotation (SER), supination/adduction (SAD), pronation/external rotation (PER), or pronation/abduction (PAB). Corresponding radiographs were classified by the LH system and the AO system. Thirty injury videos with their corresponding radiographs were collected. Of the video clips reviewed, 16 had SAD mechanisms and 14 had PER mechanisms. There were 26 ankle fractures, 3 nonfractures, and 1 subtalar dislocation. Twelve fractures with SAD mechanisms had corresponding SAD fracture patterns. Five PER mechanisms had PER fracture patterns. Eight PER mechanisms had SER fracture patterns and 1 had SAD fracture pattern. When the AO classification was used, all 12 SAD type injuries had a 44A type fracture, whereas the 14 PER injuries resulted in nine 44B fractures, two 44C fractures, and three 43A fractures. When injury video clips of ankle fractures were matched to their corresponding radiographs, the LH system was 65% (17/26) consistent in predicting fracture patterns from the deforming injury mechanism. When the AO classification system was used, consistency was 81% (21/26). The AO classification, despite its development as a purely radiographic system, correlated with in vivo injuries, as based on observed mechanism of injury, more closely than did the LH system. Level IV, case series.

Atomic-scale simulation of dust grain collisions: Surface chemistry and dissipation beyond existing theory

NASA Astrophysics Data System (ADS)

Quadery, Abrar H.; Doan, Baochi D.; Tucker, William C.; Dove, Adrienne R.; Schelling, Patrick K.

2017-10-01

The early stages of planet formation involve steps where submicron-sized dust particles collide to form aggregates. However, the mechanism through which millimeter-sized particles aggregate to kilometer-sized planetesimals is still not understood. Dust grain collision experiments carried out in the environment of the Earth lead to the prediction of a 'bouncing barrier' at millimeter-sizes. Theoretical models, e.g., Johnson-Kendall-Roberts and Derjaguin-Muller-Toporov theories, lack two key features, namely the chemistry of dust grain surfaces, and a mechanism for atomic-scale dissipation of energy. Moreover, interaction strengths in these models are parameterized based on experiments done in the Earth's environment. To address these issues, we performed atomic-scale simulations of collisions between nonhydroxylated and hydroxylated amorphous silica nanoparticles. We used the ReaxFF approach which enables modeling chemical reactions using an empirical potential. We found that nonhydroxylated nanograins tend to adhere with much higher probability than suggested by existing theories. By contrast, hydroxylated nanograins exhibit a strong tendency to bounce. Also, the interaction between dust grains has the characteristics of a strong chemical force instead of weak van der Waals forces. This suggests that the formation of strong chemical bonds and dissipation via internal atomic vibration may result in aggregation beyond what is expected based on our current understanding. Our results also indicate that experiments should more carefully consider surface conditions to mimic the space environment. We also report results of simulations with molten silica nanoparticles. It is found that molten particles are more likely to adhere due to viscous dissipation, which supports theories that suggest aggregation to kilometer scales might require grains to be in a molten state.

Effect of juvenile hormone and serotonin (5-HT) on mixis induction of the rotifer Brachionus plicatilis Muller.

PubMed

Gallardo; Hagiwara; Snell

2000-09-05

Juvenile hormone (JH) and serotonin (5-HT) were previously shown to enhance mictic (sexual) female production of the rotifer Brachionus plicatilis in batch cultures. To explore the basis of these effects, experiments were conducted on isolated individuals. JH treatment of maternal rotifers with 5 and 50 µgml(-1) (18.8 and 187.7 µM) resulted in significantly higher (P<0.05) mictic female production in the second (F(2)) and third (F(3)) generations. JH treatment was effective even at a lower food concentration of 7x10(5) cellsml(-1), but it was not effective when free ammonia was added at 2.4 and 3.1 µgml(-1). Mictic female production was not increased with exposure to 5-HT up to 50 µgml(-1) (129.1 µM) concentrations. When food level was reduced to 7x10(5) cellsml(-1), however, 5-HT-treated rotifers produced significantly (P<0.05) more mictic females than the control, particularly in F(3) generation. Mictic female production of 5-HT-treated rotifers did not differ from that of the control with or without free ammonia, but the intrinsic rate of natural increase (r) of 5-HT-treated rotifers at 3.1 µgml(-1) free ammonia was significantly higher than the control. These results show that juvenile hormone increases mictic female production under optimum and sub-optimum food levels, whereas 5-HT increases both mictic female production at low food level and population growth rate at high free ammonia concentrations. These compounds could be used to manage rotifer cultures and probe the mechanisms controlling the rotifer life cycle as it switches to mictic reproduction.

Localization of laminin B1 mRNA in retinal ganglion cells by in situ hybridization

PubMed Central

1990-01-01

In the nervous system, neuronal migration and axonal growth are dependent on specific interactions with extracellular matrix proteins. During development of the vertebrate retina, ganglion cell axons extend along the internal limiting (basement) membrane and form the optic nerve. Laminin, a major component of basement membranes, is known to be present in the internal limiting membrane, and might be involved in the growth of ganglion cell axons. The identity of the cells that produce retinal laminin, however, has not been established. In the present study, we have used in situ hybridization to localize the sites of laminin B1 mRNA synthesis in the developing mouse retina. Our results show that there are at least two principal sites of laminin B1 mRNA synthesis: (a) the hyaloid vessels and the lens during the period of major axonal outgrowth, and (b) the retinal ganglion cells at later development stages. Muller (glial) cells, the major class of nonneuronal cells in the retina, do not appear to express laminin B1 mRNA either during development or in the adult retina. In Northern blots, we found a single transcript of approximately 6-kb size that encodes the laminin B1 chain in the retina. Moreover, laminin B1 mRNA level was four- to fivefold higher in the postnatal retina compared to that in the adult. Our results show that in addition to nonneuronal cells, retinal ganglion cells also synthesize laminin. The function of laminin in postnatal retinas, however, remains to be elucidated. Nevertheless, our findings raise the possibility that neurons in other parts of the nervous system might also synthesize extracellular matrix proteins. PMID:2351694

Determination of gross alpha and gross beta in soil around repository facility at Bukit Kledang, Perak, Malaysia

NASA Astrophysics Data System (ADS)

Adziz, Mohd Izwan Abdul; Siong, Khoo Kok

2018-04-01

Recently, the Long Term Storage Facility (LTSF) in Bukit Kledang, Perak, Malaysia, has been upgraded to repository facility upon the completion of decontamination and decommissioning (D&D) process. Thorium waste and contaminated material that may contain some minor amounts of thorium hydroxide were disposed in this facility. This study is conducted to determine the concentrations of gross alpha and gross beta radioactivities in soil samples collected around the repository facility. A total of 12 soil samples were collected consisting 10 samples from around the facility and 2 samples from selected residential area near the facility. In addition, the respective dose rates were measured 5 cm and 1 m above the ground by using survey meter with Geiger Muller (GM) detector and Sodium Iodide (NaI) detector. Soil samples were collected using hand auger and then were taken back to the laboratory for further analysis. Samples were cleaned, dried, pulverized and sieved prior to analysis. Gross alpha and gross beta activity measurements were carried out using gas flow proportional counter, Canberra Series 5 XLB - Automatic Low Background Alpha and Beta Counting System. The obtained results show that, the gross alpha and gross beta activity concentration ranged from 1.55 to 5.34 Bq/g with a mean value of 3.47 ± 0.09 Bq/g and 1.64 to 5.78 Bq/g with a mean value of 3.49 ± 0.09 Bq/g, respectively. These results can be used as an additional data to represent terrestrial radioactivity baseline data for Malaysia environment. This estimation will also serve as baseline for detection of any future related activities of contamination especially around the repository facility area.

Characteristics of Induced and Tectonic Seismicity in Oklahoma Based on High-precision Earthquake Relocations and Focal mechanisms

NASA Astrophysics Data System (ADS)

Aziz Zanjani, F.; Lin, G.

2016-12-01

Seismic activity in Oklahoma has greatly increased since 2013, when the number of wastewater disposal wells associated with oil and gas production was significantly increased in the area. An M5.8 earthquake at about 5 km depth struck near Pawnee, Oklahoma on September 3, 2016. This earthquake is postulated to be related with the anthropogenic activity in Oklahoma. In this study, we investigate the seismic characteristics in Oklahoma by using high-precision earthquake relocations and focal mechanisms. We acquire the seismic data between January 2013 and October 2016 recorded by the local and regional (within 200 km distance from the Pawnee mainshock) seismic stations from the Incorporated Research Institutions for Seismology (IRIS). We relocate all the earthquakes by applying the source-specific station term method and a differential time relocation method based on waveform cross-correlation data. The high-precision earthquake relocation catalog is then used to perform full-waveform modeling. We use Muller's reflection method for Green's function construction and the mtinvers program for moment tensor inversion. The sensitivity of the solution to the station and component distribution is evaluated by carrying out the Jackknife resampling. These earthquake relocation and focal mechanism results will help constrain the fault orientation and the earthquake rupture length. In order to examine the static Coulomb stress change due to the 2016 Pawnee earthquake, we utilize the Coulomb 3 software in the vicinity of the mainshock and compare the aftershock pattern with the calculated stress variation. The stress change in the study area can be translated into probability of seismic failure on other parts of the designated fault.

Recurrent loss of sex is associated with accumulation of deleterious mutations in Oenothera.

PubMed

Hollister, Jesse D; Greiner, Stephan; Wang, Wei; Wang, Jun; Zhang, Yong; Wong, Gane Ka-Shu; Wright, Stephen I; Johnson, Marc T J

2015-04-01

Sexual reproduction is nearly universal among eukaryotes. Theory predicts that the rarity of asexual eukaryotic species is in part caused by accumulation of deleterious mutations and heightened extinction risk associated with suppressed recombination and segregation in asexual species. We tested this prediction with a large data set of 62 transcriptomes from 29 species in the plant genus Oenothera, spanning ten independent transitions between sexual and a functionally asexual genetic system called permanent translocation heterozygosity. Illumina short-read sequencing and de novo transcript assembly yielded an average of 16.4 Mb of sequence per individual. Here, we show that functionally asexual species accumulate more deleterious mutations than sexual species using both population genomic and phylogenetic analysis. At an individual level, asexual species exhibited 1.8 × higher heterozygosity than sexual species. Within species, we detected a higher proportion of nonsynonymous polymorphism relative to synonymous variation within asexual compared with sexual species, indicating reduced efficacy of purifying selection. Asexual species also exhibited a greater proportion of transcripts with premature stop codons. The increased proportion of nonsynonymous mutations was also positively correlated with divergence time between sexual and asexual species, consistent with Muller's ratchet. Between species, we detected repeated increases in the ratio of nonsynonymous to synonymous divergence in asexual species compared with sexually reproducing sister taxa, indicating increased accumulation of deleterious mutations. These results confirm that an important advantage of sex is that it facilitates selection against deleterious alleles, which might help to explain the dearth of extant asexual species. © The Author 2014. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

The emergence and evolution of swine viral diseases: to what extent have husbandry systems and global trade contributed to their distribution and diversity?

PubMed

Drew, T W

2011-04-01

Over the last 20 years, pig production has been characterised by a rapid increase in the volume of pig meat produced, greater intensification of the pig-rearing process and much greater international movement of products. There have also been many novel viral diseases that challenge the industry. Are these two developments linked and, if so, how? To understand how changes in the industry may influence the evolution of viruses, it is important to understand something of evolutionary theory. For RNA viruses, the concept of 'quasispecies' has moved solidly from theory to fact. Such viruses do not exist as a single entity, but as a 'cloud' of viruses, whose degree of diversity is influenced by a number of factors. Chief among these are the size and rate of the replicating population, along with the availability and diversity of susceptible hosts. A feature of RNA viruses is a high level of mutation, due to lack of capability to correct errors on the part of the host cell. Both in vivo and in vitro, RNA viruses have been shown to accumulate and fix these mutations, leading to bottleneck events and fitness loss, the phenomenon known as'Muller's ratchet'. Likewise, the opposite effect, fitness gain, can be achieved in an environment providing for high levels of replication and the generation of large populations of virus. This has been shown to be possible in vitro by high-volume passage. It is possible that the regular introduction of diverse viruses within large-scale pig production provides an in vivo equivalent that could drive quasispecies populations to increased fitness, and may explain why emergent viruses, either new to science or with new synergies and presentation, seem to be appearing more commonly.

Naringin attenuates diabetic retinopathy by inhibiting inflammation, oxidative stress and NF-κB activation in vivo and in vitro

PubMed Central

Liu, Lihua; Zuo, Zhongfu; Lu, Sijing; Liu, Aihua; Liu, Xuezheng

2017-01-01

Objective(s): Naringin, an essential flavonoid, inhibits inflammatory response and oxidative stress in diabetes. However, whether naringin has beneficial effects on diabetic retinopathy (DR) remains unknown. Materials and Methods: Streptozotocin (STZ, 65 mg/kg) was intraperitoneally injected into male rats (8 weeks old weighting 200-250 g) to establish diabetic model, then naringin (20, 40 or 80 mg/kg/day) was intraperitoneally injected into the diabetic rats for twelve weeks. Glial fibrillary acidic protein (GFAP) level, thickness of ganglion cell layer (GCL) and ganglion cell counts were assessed in diabetic retina in vivo. Naringin (50 μM) that significantly inhibited high glucose (HG, 25 mM)-induced cell proliferation was used to treat rat Muller cell line (rMC1) in vitro. Inflammatory response, oxidative stress and activation of nuclear factor kappa B (NF-κB) p65 were evaluated in retina in vivo and in rMC1 cells in vitro. Results: Naringin alleviated DR symptoms as evidenced by the increased retinal ganglion cells and decreased GFAP level in rat retina. Naringin exhibited anti-inflammatory and antioxidative effects as confirmed by the down-regulated pro-inflammatory cytokines, tumor necrosis factor alpha (TNF-α), interleukin-1β (IL-1β) and interleukin-6 (IL-6), and the up-regulated antioxidants, glutathione (GSH), superoxide dismutase (SOD) and catalase (CAT) in DR rats. Moreover, we found that naringin inhibited HG-induced proliferation, abnormal inflammatory response and oxidative stress in rMC1 cells. In addition, the enhanced nuclear translocation of NF-κB p65 in diabetic rat retina and HG-induced rMC1 cells was suppressed by naringin. Conclusion: Naringin attenuates inflammatory response, oxidative stress and NF-κB activation in experimental models of DR. PMID:28852447

Discrete Element Method Modeling of Bedload Transport: Towards a physics-based link between bed surface variability and particle entrainment statistics

NASA Astrophysics Data System (ADS)

Ghasemi, A.; Borhani, S.; Viparelli, E.; Hill, K. M.

2017-12-01

The Exner equation provides a formal mathematical link between sediment transport and bed morphology. It is typically represented in a discrete formulation where there is a sharp geometric interface between the bedload layer and the bed, below which no particles are entrained. For high temporally and spatially resolved models, this is strictly correct, but typically this is applied in such a way that spatial and temporal fluctuations in the bed surface (bedforms and otherwise) are not captured. This limits the extent to which the exchange between particles in transport and the sediment bed are properly represented, particularly problematic for mixed grain size distributions that exhibit segregation. Nearly two decades ago, Parker (2000) provided a framework for a solution to this dilemma in the form of a probabilistic Exner equation, partially experimentally validated by Wong et al. (2007). We present a computational study designed to develop a physics-based framework for understanding the interplay between physical parameters of the bed and flow and parameters in the Parker (2000) probabilistic formulation. To do so we use Discrete Element Method simulations to relate local time-varying parameters to long-term macroscopic parameters. These include relating local grain size distribution and particle entrainment and deposition rates to long- average bed shear stress and the standard deviation of bed height variations. While relatively simple, these simulations reproduce long-accepted empirically determined transport behaviors such as the Meyer-Peter and Muller (1948) relationship. We also find that these simulations reproduce statistical relationships proposed by Wong et al. (2007) such as a Gaussian distribution of bed heights whose standard deviation increases with increasing bed shear stress. We demonstrate how the ensuing probabilistic formulations provide insight into the transport and deposition of both narrow and wide grain size distribution.

A verification strategy for web services composition using enhanced stacked automata model.

PubMed

Nagamouttou, Danapaquiame; Egambaram, Ilavarasan; Krishnan, Muthumanickam; Narasingam, Poonkuzhali

2015-01-01

Currently, Service-Oriented Architecture (SOA) is becoming the most popular software architecture of contemporary enterprise applications, and one crucial technique of its implementation is web services. Individual service offered by some service providers may symbolize limited business functionality; however, by composing individual services from different service providers, a composite service describing the intact business process of an enterprise can be made. Many new standards have been defined to decipher web service composition problem namely Business Process Execution Language (BPEL). BPEL provides an initial work for forming an Extended Markup Language (XML) specification language for defining and implementing business practice workflows for web services. The problems with most realistic approaches to service composition are the verification of composed web services. It has to depend on formal verification method to ensure the correctness of composed services. A few research works has been carried out in the literature survey for verification of web services for deterministic system. Moreover the existing models did not address the verification properties like dead transition, deadlock, reachability and safetyness. In this paper, a new model to verify the composed web services using Enhanced Stacked Automata Model (ESAM) has been proposed. The correctness properties of the non-deterministic system have been evaluated based on the properties like dead transition, deadlock, safetyness, liveness and reachability. Initially web services are composed using Business Process Execution Language for Web Service (BPEL4WS) and it is converted into ESAM (combination of Muller Automata (MA) and Push Down Automata (PDA)) and it is transformed into Promela language, an input language for Simple ProMeLa Interpreter (SPIN) tool. The model is verified using SPIN tool and the results revealed better recital in terms of finding dead transition and deadlock in contrast to the existing models.

Actively Learning about the Active Sun: Using JHelioviewer in Undergraduate Astronomy

NASA Astrophysics Data System (ADS)

Stage, Michael D.

2018-06-01

Solar phenomena of the chromosphere, corona and photosphere are only truly revealed through multi-wavelength and time-dependent study. While one can show slides of models of the solar convection zone, videos of granulation, and magnetogram and UV images, it is now possible to engage students much more fully in learning about dynamic solar phenomena such as the evolution of sunspots and the magentic field. JHelioviewer is professional solar visualization tool developed by an international team as part of the ESA/NASA Helioviewer project (Muller et al., 2017, A&A 606, A10), which allows users to select and overlay movies of solar data from multiple instruments of multiple satellite and ground-based observatories, with complete control over time-sequencing, image overlays, solar coordinate grids, rotational tracking, and export functions. I developed materials using the viewer for my sophomore-level undergraduate solar astronomy course to introduce students to the dynamics of the solar surface and atmosphere. The lab-like projects, suitable for in-class, labs, or home-work assignments, allow students to watch the formation, strengthening, movement, and dissipation of sunspots; to classify spots; to study the magnetic flux tubes connecting spots; to see reconnection; to learn about the solar coordinate systems (Stonyhurst, Carrington, etc.); to see how line emission (H-alpha, C, Fe and He UV lines from SDO, etc.) traces the structure of the atmosphere at different heights and temperatures; to observe the Wilson effect; and to measure motions such as moat flow and photospheric flow by tracking individual elements in magnetograms. In this presentation I share my activities and approach, which can be tailored to suit gen-ed, intermediate, or advanced astrophysics majors. (The author has no connection with the JHelioviewer project or team.)

Investigating Environmental Tectonics in Northern Alpine Foreland of Europe

NASA Astrophysics Data System (ADS)

Cloetingh, Sierd; Ziegler, Peter; Cornu, Tristan; Ustaszewski, K.; Schmid, S.; Dezes, P.; Hinsch, R.; Decker, K.; Lopes Cardozo, G.; Granet, M.; Bertrand, G.; Behrmann, J.; Michon, L.; Pagnier, H.; van Wees, J. D.; Rozsa, S.; Heck, B.; Verdun, J.; Kahle, H. G.; Fracassi, U.; Winter, T.; Burov, E.

Until now, research on neotectonics and related seismicity has mostly focused on active plate boundaries characterized by a generally high level of earthquake activity. Current seismic hazard estimates for intraplate areas are commonly based on probabilistic analyses of historical and instrumental earthquake data. The accuracy of these hazard estimates is limited by the nature of the data (e.g., ambiguous historical sources), and by the restriction of available earthquake catalogues to time scales of only few hundred years. Both of these are geologically insignificant and unsuitable for describing tectonic processes causing earthquakes. This is especially relevant to intraplate regions, where faults show low slip rates resulting in long average recurrence times for large earthquakes (103 to 106 yrs), such as the devastating Basel earthquake of 1356, with an estimated magnitude of 6.5. The Alpine orogen and the intraplate sedimentary basins and rifts of its northern foreland are associated with a much higher level of neotectonic activity than hitherto assumed. Seismicity and stress indicator data, combined with geodetic and geomorphologic observations, demonstrate that the Northern Alpine foreland is being actively deformed [Cloetingh, 2000; Ziegler et al., 2002; Behrmann et al., 2003]. This has major implications for the assessment of their natural hazards and environmental degradation. The northwest European lithosphere has undergone a polyphase evolution, in which the interplay between upper mantle thermal perturbations [Goes et al., 2000; Ritter et al., 2001] and stress-induced intraplate deformation [Muller et al., 1992; Ziegler et al., 2002] played an important role. A number of recent findings point to an important role of lithospheric folding in thermally weakened lithosphere of the northwestern European foreland [Cloetingh et al., 1999].

Terbinafine-loaded wound dressing for chronic superficial fungal infections.

PubMed

Paskiabi, Farnoush Asghari; Bonakdar, Shahin; Shokrgozar, Mohammad Ali; Imani, Mohammad; Jahanshiri, Zahra; Shams-Ghahfarokhi, Masoomeh; Razzaghi-Abyaneh, Mehdi

2017-04-01

In spite of developing new drugs and modern formulations, the treatments of chronic fungal infections are still challenging. Fibrous wound dressings are new suggestions for the treatment of chronic superficial infections. In the present study, we formulated an antifungal agent, terbinafine hydrochloride (TFH), which is a hydrophobic drug, in wound dressings prepared by electrospun polycaprolactone, polycaprolactone/gelatin (50:50 w/w) and gelatin. To obtain more water-stable meshes, the preparations were treated by glutaraldehyde and their properties were determined before and after treatment. The morphology of fibrous meshes was observed by scanning electron microscopy. Drug loading efficiency and release rate were measured by high performance liquid chromatography (HPLC) and the release rate was monitored for 144h. Antifungal tests were performed on Trichophyton mentagrophytes, Aspergillus fumigatus and Candida albicans cultured on Muller-Hinton agar. The toxicity of the meshes was measured after 24h and 14days by MTT assay. Terbinafine loading of polycaprolactone/gelatin (50:50) was 100% and it released the highest amount of TFH too. In antifungal tests, all samples were able to hinderT. mentagrophytes and A. fumigatus but not C. albicans growth among them, polycaprolactone fibers made the largest inhibition zone. In MTT assay, none of prepared samples showed toxicity against L929 cells. Teken together, the prepared TFH-loaded PCL/gelatin electrospun meshes were able to release TFH slowly and in a steady state in time. With respect to no obvious cytotoxicity in MTT assay and stong antifungal activity toward T. mentagrophytesin vitro, these TFH-based meshes could be considered as potential candidates in clinical application as wound dressing for treatment of chronic dermatophytosis. Copyright © 2016 Elsevier B.V. All rights reserved.

Sympatric bromeliad species (Pitcairnia spp.) facilitate tests of mechanisms involved in species cohesion and reproductive isolation in Neotropical inselbergs.

PubMed

Palma-Silva, C; Wendt, T; Pinheiro, F; Barbará, T; Fay, Michael F; Cozzolino, S; Lexer, C

2011-08-01

The roles of intra- and interspecific gene flow in speciation and species evolution are topics of great current interest in molecular ecology and evolutionary biology. Recent modelling studies call for new empirical data to test hypotheses arising from the recent shift from a 'whole-genome reproductive isolation' view to a 'genic' view of species and speciation. Particularly scarce (and thus of particular interest) are molecular genetic data on recently radiated, naturally hybridizing species in strongly structured and species-rich environments. Here, we studied four sympatric plant species (Pitcairnia spp.; Bromeliaceae) adapted to Neotropical inselbergs (isolated outcrops resembling habitat 'islands' in tropical rainforests) using nuclear and plastid DNA. Patterns of plastid DNA haplotype sharing and nuclear genomic admixture suggest the presence of both, incomplete lineage sorting and interspecific gene flow over extended periods of time. Integrity and cohesion of inselberg species of Pitcairnia are maintained despite introgression and in the face of extremely low within-species migration rates (N(e)m < 1 migrant per generation). Cross-evaluation of our genetic data against published pollination experiments indicate that species integrity is maintained by the simultaneous action of multiple prezygotic barriers, including flowering phenology, pollinator isolation and divergent mating systems. Postzygotic Bateson-Dobzhansky-Muller incompatibilities appear to contribute to isolation, as suggested by asymmetric introgression rates of single loci. Our results suggest that incomplete lineage sorting, hybridization and introgression form integral aspects of adaptive radiation in Neotropical inselberg 'archipelagos'. Inselbergs with multiple closely related co-occurring species should be of special interest to students of speciation in mountain systems, and to ongoing conservation programmes in the Atlantic Rainforest biodiversity hotspot. © 2011 Blackwell Publishing Ltd.

The Hack's law applied to young volcanic basin: the Tahiti case

NASA Astrophysics Data System (ADS)

Ye, F.; Sichoix, L.; Barriot, J.; Serafini, J.

2010-12-01

We study the channel morphology over the Tahiti island from the Hack’s law perspective. The Hack’s law is an empirical power relationship between basin drainage area and the length of its main channel. It had also been shown that drainage area becomes more elongate with increasing basin size. For typical continental basins, the exponent value lies between 0.47 for basins larger than 260,000 km2 and 0.7 for those spanning less than 20,720 km2 (Muller, 1973). In Tahiti, we extracted 27 principal basins ranging from 7 km2 to 90 km2 from a Digital Terrain Model of the island with a 5 m-resolution. We demonstrate that the Hack’s law still apply for such small basins (correlation coefficient R2=0.7) with an exponent value being approximately 0.5. It appears that the exponent value is influenced by the local geomorphic condition, and does not follow the previous study results (the exponent value decreases with increasing drainage area.) Our exponent value matches the result found w.r.t. debris-flow basins of China for drainage areas less than 100 km2 (Li et al., 2008). Otherwise, the young volcanic basins of Tahiti do not become longer and narrower with increasing basin size (R2=0.1). Besides, there is no correlation between the basin area and the basin convexity (R2=0). This means that there is no statistical change in basin shape with basin size. We present also the drainage area-slope relationship with respect to sediment or transport-limited processes. Key words: Hack’s law, channel morphology, DTM

A Comparative Analysis of Antimicrobial Property of Wine and Ozone with Calcium Hydroxide and Chlorhexidine

PubMed Central

Ebenezar, A. V. Rajesh; Anand, Nirupa; Mary, A.Vinita; Mony, Bejoy

2015-01-01

Background The antibacterial properties of wine and ozone have been established but their antibacterial efficacies against endodontic pathogens are yet to be ascertained. Aim The purpose of this study is to comparatively evaluate the antibacterial property of ozonated water, white wine (14%) and de-alcoholised white wine. Materials and Methods S.mutans and E.faecalis were subcultured and inoculated in a nutrient broth for 24 hours. The following groups were formulated: Group 1A:2% Chlorhexidine (Control group); Group 1B:White wine; Group 1C:Dealcoholised white wine; Group 1D:Ozonated water; Group 2A: Ca(OH)2 + Chlorhexidine (Control group); Group 2B: White wine + Ca(OH)2; Group 2C:De-alcoholised White wine + Ca(OH)2 + chlorhexidine; Group 2D:White wine + Ca(OH)2 + chlorhexidine and group 2E: Dealcoholised white wine + Ca(OH)2 + chlorhexidine. The samples were allowed to diffuse into the culture medium for two hours, later the S. mutans were streaked on to the blood agar medium and the E. faecalis were streaked on to the Muller Hilton agar medium and incubated for 48 hours at 370C the zone of inhibition was measured after 48 hours. Results There was no growth of microorganisms seen with ozonated water. Chlorhexidine showed large zone of inhibition compared to the other groups. White wine has better antimicrobial property than de-alcoholised white wine, but when mixed with calcium hydroxide the dealcoholised white wine has better action against the microorganisms. Conclusion Ozonated water has the best antibacterial property and the antibacterial action of Calcium hydroxide is enhanced when it is mixed with de-alcoholised white wine. PMID:26266206

Some case studies of skewed (and other ab-normal) data distributions arising in low-level environmental research.

PubMed

Currie, L A

2001-07-01

Three general classes of skewed data distributions have been encountered in research on background radiation, chemical and radiochemical blanks, and low levels of 85Kr and 14C in the atmosphere and the cryosphere. The first class of skewed data can be considered to be theoretically, or fundamentally skewed. It is typified by the exponential distribution of inter-arrival times for nuclear counting events for a Poisson process. As part of a study of the nature of low-level (anti-coincidence) Geiger-Muller counter background radiation, tests were performed on the Poisson distribution of counts, the uniform distribution of arrival times, and the exponential distribution of inter-arrival times. The real laboratory system, of course, failed the (inter-arrival time) test--for very interesting reasons, linked to the physics of the measurement process. The second, computationally skewed, class relates to skewness induced by non-linear transformations. It is illustrated by non-linear concentration estimates from inverse calibration, and bivariate blank corrections for low-level 14C-12C aerosol data that led to highly asymmetric uncertainty intervals for the biomass carbon contribution to urban "soot". The third, environmentally, skewed, data class relates to a universal problem for the detection of excursions above blank or baseline levels: namely, the widespread occurrence of ab-normal distributions of environmental and laboratory blanks. This is illustrated by the search for fundamental factors that lurk behind skewed frequency distributions of sulfur laboratory blanks and 85Kr environmental baselines, and the application of robust statistical procedures for reliable detection decisions in the face of skewed isotopic carbon procedural blanks with few degrees of freedom.

Natural variation for a hybrid incompatibility between two species of Mimulus.

PubMed

Sweigart, Andrea L; Mason, Amanda R; Willis, John H

2007-01-01

Understanding the process by which hybrid incompatibility alleles become established in natural populations remains a major challenge to evolutionary biology. Previously, we discovered a two-locus Dobzhansky-Muller incompatibility that causes severe hybrid male sterility between two inbred lines of the incompletely isolated wildflower species, Mimulus guttatus and M. nasutus. An interspecific cross between these two inbred lines revealed that the M. guttatus (IM62) allele at hybrid male sterility 1 (hms1) acts dominantly in combination with recessive M. nasutus (SF5) alleles at hybrid male sterility 2 (hms2) to cause nearly complete hybrid male sterility. In this report, we extend these genetic analyses to investigate intraspecific variation for the hms1-hms2 incompatibility in natural populations of M. nasutus and M. guttatus, performing a series of interspecific crosses between individuals collected from a variety of geographic locales. Our results suggest that hms2 incompatibility alleles are common and geographically widespread within M. nasutus, but absent or rare in M. guttatus. In contrast, the hms1 locus is polymorphic within M. guttatus and the incompatibility allele appears to be extremely geographically restricted. We found evidence for the presence of the hms1 incompatibility allele in only two M. guttatus populations that exist within a few kilometers of each other. The restricted distribution of the hms1 incompatibility allele might currently limit the potential for the hms1-hms2 incompatibility to act as a species barrier between sympatric populations of M. guttatus and M. nasutus. Extensive sampling within a single M. guttatus population revealed that the hms1 locus is polymorphic and that the incompatibility allele appears to segregate at intermediate frequency, a pattern that is consistent with either genetic drift or natural selection.

The Influence of Biogenic Emissions on Tropospheric Composition over Africa during 2006

NASA Astrophysics Data System (ADS)

Williams, J. E.; Scheele, R.; van Velthoven, P. F. J.; Cammas, J.-P.; Galy-Lacaux, C.; Thouret, V.

2009-04-01

Biogenic emissions of NO and Volatile Organic Compounds (BVOC's) play an important role in determining the oxidizing capacity of the troposphere near tropical regions which have sparse populations. Here we use a 3D global CTM (TM4) for the purpose of examining the effect of using a recent climatology of biogenic emissions from the ORCHIDEE model (Lathiére et al, 2006) on the distribution and concentrations of trace gas species over equatorial Africa during the AMMA measurement year of 2006. We compare the results against simulations which adopt an older biogenic inventory compiled during the POET project (Granier et al, 2005). Sensitivity studies are conducted to determine the effect of both NO emitted from soils and BVOC's emitted from vegetation (namely the cumulative effect of CO, HCHO, ethanol, acetic acid, acetone and CH3CHO) on tropospheric ozone, NOx and the nitrogen reservoir species PAN and HNO3. Comparisons with a host of measurements have been performed to assess the impact on model performance. Finally an analysis of the tropical O3 budget is performed to quantify differences introduced for the oxidizing capacity of the tropical troposphere. Granier, C., Guether, A., Lamarque, J. F., Mieville, A., Muller, J.F., Olivier, J., Orlando, J., Peters, J., Petron, G., Tyndall, G., amd Wallens, S., POET - a database of surface emissions of ozone precursors, available at: http://www.aero.jussieu.fr/project/ACCENT/POET.php, 2005. Lathiére, J., Hauglustaine, D. A., Friend, A. D., De Noblet-Ducoudré, N., Viovy, N., and Folberth, G. A., Impact of climate variability and land use changes on global biogenic volatile organic compound emissions, Atms. Chem. Phys., 6, 2129-2146, 2006.

Naringin attenuates diabetic retinopathy by inhibiting inflammation, oxidative stress and NF-κB activation in vivo and in vitro.

PubMed

Liu, Lihua; Zuo, Zhongfu; Lu, Sijing; Liu, Aihua; Liu, Xuezheng

2017-07-01

Naringin, an essential flavonoid, inhibits inflammatory response and oxidative stress in diabetes. However, whether naringin has beneficial effects on diabetic retinopathy (DR) remains unknown. Streptozotocin (STZ, 65 mg/kg) was intraperitoneally injected into male rats (8 weeks old weighting 200-250 g) to establish diabetic model, then naringin (20, 40 or 80 mg/kg/day) was intraperitoneally injected into the diabetic rats for twelve weeks. Glial fibrillary acidic protein (GFAP) level, thickness of ganglion cell layer (GCL) and ganglion cell counts were assessed in diabetic retina in vivo . Naringin (50 μM) that significantly inhibited high glucose (HG, 25 mM)-induced cell proliferation was used to treat rat Muller cell line (rMC1) in vitro . Inflammatory response, oxidative stress and activation of nuclear factor kappa B (NF-κB) p65 were evaluated in retina in vivo and in rMC1 cells in vitro . Naringin alleviated DR symptoms as evidenced by the increased retinal ganglion cells and decreased GFAP level in rat retina. Naringin exhibited anti-inflammatory and antioxidative effects as confirmed by the down-regulated pro-inflammatory cytokines, tumor necrosis factor alpha (TNF-α), interleukin-1β (IL-1β) and interleukin-6 (IL-6), and the up-regulated antioxidants, glutathione (GSH), superoxide dismutase (SOD) and catalase (CAT) in DR rats. Moreover, we found that naringin inhibited HG-induced proliferation, abnormal inflammatory response and oxidative stress in rMC1 cells. In addition, the enhanced nuclear translocation of NF-κB p65 in diabetic rat retina and HG-induced rMC1 cells was suppressed by naringin. Naringin attenuates inflammatory response, oxidative stress and NF-κB activation in experimental models of DR.

Combined visual illusion effects on the perceived index of difficulty and movement outcomes in discrete and continuous fitts' tapping.

PubMed

Alphonsa, Sushma; Dai, Boyi; Benham-Deal, Tami; Zhu, Qin

2016-01-01

The speed-accuracy trade-off is a fundamental movement problem that has been extensively investigated. It has been established that the speed at which one can move to tap targets depends on how large the targets are and how far they are apart. These spatial properties of the targets can be quantified by the index of difficulty (ID). Two visual illusions are known to affect the perception of target size and movement amplitude: the Ebbinghaus illusion and Muller-Lyer illusion. We created visual images that combined these two visual illusions to manipulate the perceived ID, and then examined people's visual perception of the targets in illusory context as well as their performance in tapping those targets in both discrete and continuous manners. The findings revealed that the combined visual illusions affected the perceived ID similarly in both discrete and continuous judgment conditions. However, the movement outcomes were affected by the combined visual illusions according to the tapping mode. In discrete tapping, the combined visual illusions affected both movement accuracy and movement amplitude such that the effective ID resembled the perceived ID. In continuous tapping, none of the movement outcomes were affected by the combined visual illusions. Participants tapped the targets with higher speed and accuracy in all visual conditions. Based on these findings, we concluded that distinct visual-motor control mechanisms were responsible for execution of discrete and continuous Fitts' tapping. Although discrete tapping relies on allocentric information (object-centered) to plan for action, continuous tapping relies on egocentric information (self-centered) to control for action. The planning-control model for rapid aiming movements is supported.

An infrastructure for accurate characterization of single-event transients in digital circuits.

PubMed

Savulimedu Veeravalli, Varadan; Polzer, Thomas; Schmid, Ulrich; Steininger, Andreas; Hofbauer, Michael; Schweiger, Kurt; Dietrich, Horst; Schneider-Hornstein, Kerstin; Zimmermann, Horst; Voss, Kay-Obbe; Merk, Bruno; Hajek, Michael

2013-11-01

We present the architecture and a detailed pre-fabrication analysis of a digital measurement ASIC facilitating long-term irradiation experiments of basic asynchronous circuits, which also demonstrates the suitability of the general approach for obtaining accurate radiation failure models developed in our FATAL project. Our ASIC design combines radiation targets like Muller C-elements and elastic pipelines as well as standard combinational gates and flip-flops with an elaborate on-chip measurement infrastructure. Major architectural challenges result from the fact that the latter must operate reliably under the same radiation conditions the target circuits are exposed to, without wasting precious die area for a rad-hard design. A measurement architecture based on multiple non-rad-hard counters is used, which we show to be resilient against double faults, as well as many triple and even higher-multiplicity faults. The design evaluation is done by means of comprehensive fault injection experiments, which are based on detailed Spice models of the target circuits in conjunction with a standard double-exponential current injection model for single-event transients (SET). To be as accurate as possible, the parameters of this current model have been aligned with results obtained from 3D device simulation models, which have in turn been validated and calibrated using micro-beam radiation experiments at the GSI in Darmstadt, Germany. For the latter, target circuits instrumented with high-speed sense amplifiers have been used for analog SET recording. Together with a probabilistic analysis of the sustainable particle flow rates, based on a detailed area analysis and experimental cross-section data, we can conclude that the proposed architecture will indeed sustain significant target hit rates, without exceeding the resilience bound of the measurement infrastructure.

Coping profiles, perceived stress and health-related behaviors: a cluster analysis approach.

PubMed

Doron, Julie; Trouillet, Raphael; Maneveau, Anaïs; Ninot, Grégory; Neveu, Dorine

2015-03-01

Using cluster analytical procedure, this study aimed (i) to determine whether people could be differentiated on the basis of coping profiles (or unique combinations of coping strategies); and (ii) to examine the relationships between these profiles and perceived stress and health-related behaviors. A sample of 578 French students (345 females, 233 males; M(age)= 21.78, SD(age)= 2.21) completed the Perceived Stress Scale-14 ( Bruchon-Schweitzer, 2002), the Brief COPE ( Muller and Spitz, 2003) and a series of items measuring health-related behaviors. A two-phased cluster analytic procedure (i.e. hierarchical and non-hierarchical-k-means) was employed to derive clusters of coping strategy profiles. The results yielded four distinctive coping profiles: High Copers, Adaptive Copers, Avoidant Copers and Low Copers. The results showed that clusters differed significantly in perceived stress and health-related behaviors. High Copers and Avoidant Copers displayed higher levels of perceived stress and engaged more in unhealthy behavior, compared with Adaptive Copers and Low Copers who reported lower levels of stress and engaged more in healthy behaviors. These findings suggested that individuals' relative reliance on some strategies and de-emphasis on others may be a more advantageous way of understanding the manner in which individuals cope with stress. Therefore, cluster analysis approach may provide an advantage over more traditional statistical techniques by identifying distinct coping profiles that might best benefit from interventions. Future research should consider coping profiles to provide a deeper understanding of the relationships between coping strategies and health outcomes and to identify risk groups. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

1H, 13C, and 15N backbone assignment and secondary structure of the receptor-binding domain of vascular endothelial growth factor.

PubMed Central

Fairbrother, W. J.; Champe, M. A.; Christinger, H. W.; Keyt, B. A.; Starovasnik, M. A.

1997-01-01

Nearly complete sequence-specific 1H, 13C, and 15N resonance assignments are reported for the backbone atoms of the receptor-binding domain of vascular endothelial growth factor (VEGF), a 23-kDa homodimeric protein that is a major regulator of both normal and pathological angiogenesis. The assignment strategy relied on the use of seven 3D triple-resonance experiments [HN(CO)CA, HNCA, HNCO, (HCA)CONH, HN(COCA)HA, HN(CA)HA, and CBCA-(CO)NH] and a 3D 15N-TOCSY-HSQC experiment recorded on a 0.5 mM (12 mg/mL) sample at 500 MHz, pH 7.0, 45 degrees C. Under these conditions, 15N relaxation data show that the protein has a rotational correlation time of 15.0 ns. Despite this unusually long correlation time, assignments were obtained for 94 of the 99 residues; 8 residues lack amide 1H and 15N assignments, presumably due to rapid exchange of the amide 1H with solvent under the experimental conditions used. The secondary structure of the protein was deduced from the chemical shift indices of the 1H alpha, 13C alpha, 13C beta, and 13CO nuclei, and from analysis of backbone NOEs observed in a 3D 15N-NOESY-HSQC spectrum. Two helices and a significant amount of beta-sheet structure were identified, in general agreement with the secondary structure found in a recently determined crystal structure of a similar VEGF construct [Muller YA et al., 1997, Proc Natl Acad Sci USA 94:7192-7197]. PMID:9336848

Norrin mediates neuroprotective effects on retinal ganglion cells via activation of the Wnt/beta-catenin signaling pathway and the induction of neuroprotective growth factors in Muller cells.

PubMed

Seitz, Roswitha; Hackl, Simon; Seibuchner, Thomas; Tamm, Ernst R; Ohlmann, Andreas

2010-04-28

Norrin is a secreted protein that binds to frizzled 4 and controls development of capillaries in retina and inner ear. We provide evidence that Norrin has distinct neuroprotective properties that are independent from its effects on vascular development. The function of Norrin was investigated in a mouse model of excitotoxic retinal ganglion cell (RGC) damage after intravitreal injection of NMDA, and in cultured Müller glia or immortalized RGC-5 cells. Intravitreal injection of Norrin significantly increased the number of surviving RGC axons in the optic nerve and decreased apoptotic death of retinal neurons following NMDA-mediated damage. This effect could be blocked by adding dickkopf (DKK)-1, an inhibitor of the Wnt/beta-catenin signaling pathway. Treatment of eyes with combined Norrin/NMDA activated Wnt/beta-catenin signaling and increased the retinal expression of leukemia inhibitory factor and endothelin-2, as well as that of neurotrophic growth factors such as fibroblast growth factor-2, brain-derived neurotrophic factor, lens epithelium-derived growth factor, and ciliary neurotrophic factor. A similar activation of Wnt/beta-catenin signaling and an increased expression of neurotrophic factors was observed in cultured Müller cells after treatment with Norrin, effects that again could be blocked by adding DKK-1. In addition, conditioned cell culture medium of Norrin-treated Müller cells increased survival of differentiated RGC-5 cells. We conclude that Norrin has pronounced neuroprotective properties on retinal neurons with the distinct potential to decrease the damaging effects of NMDA-induced RGC loss. The effects of Norrin involve activation of Wnt/beta-catenin signaling and subsequent induction of neurotrophic growth factors in Müller cells.

A Comparative Study of the Efficacy of 4% Hydroquinone vs 0.75% Kojic Acid Cream in the Treatment of Facial Melasma.

PubMed

Monteiro, Rochelle C; Kishore, B Nanda; Bhat, Ramesh M; Sukumar, D; Martis, Jacintha; Ganesh, H Kamath

2013-03-01

Melasma is a common acquired cause of facial hyperpigmentation seen predominantly among females with significant psychological and social impact. It is often recalcitrant to treatment. Several topical hypopigmenting agents have been used to combat melasma. Hydroquinone and Kojic Acid are well established monotherapeutic agents for treating melasma. This study focuses mainly on the efficacy of once daily application of 4% Hydroquinone and 0.75% Kojic Acid cream (containing 0.75% Kojic acid and 2.5% vitamin C) so as to determine an effective modality of treatment for facial melasma. A total number of 60 patients with facial melasma attending the Out-patient department of Dermatology, Venerology and Leprosy, Fr. Muller Medical College Hospital, Mangalore from Oct 2008-April 2010 were studied. Patients were allocated alternately to group A and group B. Group A patients received 4% Hydroquinone cream and group B patient received a Kojic Acid cream (which contained 0.75% Kojic acid and 2.5% vitamin C) and were advised to apply topically once daily at night. Patients were followed up on 4(th), 8(th) and 12(th) week. At each visit side effects were noted and clinical response to treatment was calculated using the MASI score. Chi square test, student 't' test. At the 4(th) week post treatment evaluation, facial hyperpigmentation responded early to 4% Hydroquinone cream than to 0.75% Kojic Acid cream. At the end of 12 week treatment period, 4% Hydroquinone cream had an overall superiority to 0.75% Kojic Acid cream as a topical hypopigmenting agent. The results of the study show that 4% Hydroquinone cream is a better topical hypopigmenting agent with rapid rate of clinical improvement when compared to 0.75% Kojic Acid cream.

An infrastructure for accurate characterization of single-event transients in digital circuits☆

PubMed Central

Savulimedu Veeravalli, Varadan; Polzer, Thomas; Schmid, Ulrich; Steininger, Andreas; Hofbauer, Michael; Schweiger, Kurt; Dietrich, Horst; Schneider-Hornstein, Kerstin; Zimmermann, Horst; Voss, Kay-Obbe; Merk, Bruno; Hajek, Michael

2013-01-01

We present the architecture and a detailed pre-fabrication analysis of a digital measurement ASIC facilitating long-term irradiation experiments of basic asynchronous circuits, which also demonstrates the suitability of the general approach for obtaining accurate radiation failure models developed in our FATAL project. Our ASIC design combines radiation targets like Muller C-elements and elastic pipelines as well as standard combinational gates and flip-flops with an elaborate on-chip measurement infrastructure. Major architectural challenges result from the fact that the latter must operate reliably under the same radiation conditions the target circuits are exposed to, without wasting precious die area for a rad-hard design. A measurement architecture based on multiple non-rad-hard counters is used, which we show to be resilient against double faults, as well as many triple and even higher-multiplicity faults. The design evaluation is done by means of comprehensive fault injection experiments, which are based on detailed Spice models of the target circuits in conjunction with a standard double-exponential current injection model for single-event transients (SET). To be as accurate as possible, the parameters of this current model have been aligned with results obtained from 3D device simulation models, which have in turn been validated and calibrated using micro-beam radiation experiments at the GSI in Darmstadt, Germany. For the latter, target circuits instrumented with high-speed sense amplifiers have been used for analog SET recording. Together with a probabilistic analysis of the sustainable particle flow rates, based on a detailed area analysis and experimental cross-section data, we can conclude that the proposed architecture will indeed sustain significant target hit rates, without exceeding the resilience bound of the measurement infrastructure. PMID:24748694

Improved Spectroscopy of Molecular Ions in the Mid-Infrared with Up-Conversion Detection

NASA Astrophysics Data System (ADS)

Markus, Charles R.; Perry, Adam J.; Hodges, James N.; McCall, Benjamin J.

2016-06-01

Heterodyne detection, velocity modulation, and cavity enhancement are useful tools for observing rovibrational transitions of important molecular ions. We have utilized these methods to investigate a number of molecular ions, such as H_3^+, CH_5^+, HeH^+, and OH^+. In the past, parasitic etalons and the lack of fast and sensitive detectors in the mid-infrared have limited the number of transitions we could measure with MHz-level precision. Recently, we have significantly reduced the amplitude of unwanted interference fringes with a Brewster-plate spoiler. We have also developed a detection scheme which up-converts the mid-infrared light with difference frequency generation which allows the use of a faster and more sensitive avalanche photodetector. The higher detection bandwidth allows for optimized heterodyne detection at higher modulation frequencies. The overall gain in signal-to-noise from both improvements will enable extensive high-precision line lists of molecular ions and searches for previously unobserved transitions. K.N. Crabtree, J.N. Hodges, B.M. Siller, A.J. Perry, J.E. Kelly, P.A. Jenkins II, and B.J. McCall, Chem. Phys. Lett. 551 (2012) 1-6. A.J. Perry, J.N. Hodges, C.R. Markus, G.S. Kocheril, and B.J. McCall, J. Mol. Spec. 317 (2015) 71-73. J.N. Hodges, A.J. Perry, P.A. Jenkins II, B.M. Siller, and B.J. McCall, J. Chem. Phys. 139 (2013) 164291. A.J. Perry, J.N. Hodges, C.R. Markus, G.S. Kocheril, and B.J. McCall. 2014, J. Chem. Phys. 141, 101101 C.R. Markus, J.N. Hodges, A.J. Perry, G.S. Kocheril, H.S.P. Muller, and B.J. McCall, Astrophys. J. 817 (2016) 138.

Patterns of Reproductive Isolation in Eucalyptus-A Phylogenetic Perspective.

PubMed

Larcombe, Matthew J; Holland, Barbara; Steane, Dorothy A; Jones, Rebecca C; Nicolle, Dean; Vaillancourt, René E; Potts, Brad M

2015-07-01

We assess phylogenetic patterns of hybridization in the speciose, ecologically and economically important genus Eucalyptus, in order to better understand the evolution of reproductive isolation. Eucalyptus globulus pollen was applied to 99 eucalypt species, mainly from the large commercially important subgenus, Symphyomyrtus. In the 64 species that produce seeds, hybrid compatibility was assessed at two stages, hybrid-production (at approximately 1 month) and hybrid-survival (at 9 months), and compared with phylogenies based on 8,350 genome-wide DArT (diversity arrays technology) markers. Model fitting was used to assess the relationship between compatibility and genetic distance, and whether or not the strength of incompatibility "snowballs" with divergence. There was a decline in compatibility with increasing genetic distance between species. Hybridization was common within two closely related clades (one including E. globulus), but rare between E. globulus and species in two phylogenetically distant clades. Of three alternative models tested (linear, slowdown, and snowball), we found consistent support for a snowball model, indicating that the strength of incompatibility accelerates relative to genetic distance. Although we can only speculate about the genetic basis of this pattern, it is consistent with a Dobzhansky-Muller-model prediction that incompatibilities should snowball with divergence due to negative epistasis. Different rates of compatibility decline in the hybrid-production and hybrid-survival measures suggest that early-acting postmating barriers developed first and are stronger than later-acting barriers. We estimated that complete reproductive isolation can take up to 21-31 My in Eucalyptus. Practical implications for hybrid eucalypt breeding and genetic risk assessment in Australia are discussed. © The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Life Beyond Earth and the Evolutionary Synthesis

NASA Astrophysics Data System (ADS)

Vakoch, Douglas A.

For many astronomers, the progressive development of life has been seen as a natural occurrence given proper environmental conditions on a planet: even though such beings would not be identical to humans, there would be significant parallels. A striking contrast is seen in writings of nonphysical scientists, who have held more widely differing views. But within this diversity, reasons for differences become more apparent when we see how views about extraterrestrials can be related to the differential emphasis placed on modern evolutionary theory by scientists of various disciplines. One clue to understanding the differences between the biologists, paleontologists, and anthropologists who speculated on extraterrestrials is suggested by noting who wrote on the subject. Given the relatively small number of commentators on the topic, it seems more than coincidental that four of the major contributors to the evolutionary synthesis in the 1930s and 1940s are among them. Upon closer examination it is evident that the exobiological arguments of Theodosius Dobzhansky and George Gaylord Simpson and, less directly, of H. J. Muller and Ernst Mayr are all related to their earlier work in formulating synthetic evolution. By examining the variety of views held by nonphysical scientists, we can see that there were significant disagreements between them about evolution into the 1960s. By the mid-1980s, many believed that "higher" life, particularly intelligent life, probably occurs quite infrequently in the universe; nevertheless, some held out the possibility that convergence of intelligence could occur across worlds. Regardless of the final conclusions these scientists reached about the likely prevalence of extraterrestrial intelligence, the use of evolutionary arguments to support their positions became increasingly common.

Novel polymer carriers and gene constructs for treatment of myocardial ischemia and infarction.

PubMed

Yockman, James W; Kastenmeier, Andrew; Erickson, Harold M; Brumbach, Jonathan G; Whitten, Matthew G; Albanil, Aida; Li, Dean Y; Kim, Sung Wan; Bull, David A

2008-12-18

The number one cause of mortality in the US is cardiovascular related disease. Future predictions do not see a reduction in this rate especially with the continued rise in obesity [P. Poirier, et al., Obesity and cardiovascular disease: pathophysiology, evaluation, and effect of weight loss, Arterioscler Thromb Vasc Biol. 26(5), (2006) 968-976.; K. Obunai, S. Jani, G.D. Dangas, Cardiovascular morbidity and mortality of the metabolic syndrome, Med.Clin. North Am., 91(6), (2007) 1169-1184]. Even so, potential molecular therapeutic targets for cardiac gene delivery are in no short supply thanks to continuing advances in molecular cardiology. However, efficient and safe delivery remains a bottleneck in clinical gene therapy [O.J. Muller, H.A. Katus, R. Bekeredjian, Targeting the heart with gene therapy-optimized gene delivery methods, Cardiovasc Res, 73(3), (2007) 453-462]. Viral vectors are looked upon favorably for their high transduction efficiency, although their ability to elicit toxic immune responses remains [C.F. McTiernan, et al., Myocarditis following adeno-associated viral gene expression of human soluble TNF receptor (TNFRII-Fc) in baboon hearts, Gene Ther, 14(23), (2007) 1613-1622]. However, this high transduction does not necessarily translate into improved efficacy [X. Hao, et al., Myocardial angiogenesis after plasmid or adenoviral VEGF-A(165) gene transfer in rat myocardial infarction model, Cardiovasc Res., 73(3), (2007) 481-487]. Naked DNA remains the preferred method of DNA delivery to cardiac myocardium and has been explored extensively in clinical trials. The results from these trials have demonstrated efficacy in regard to secondary end-points of reduced symptomatology and perfusion, but have failed to establish significant angiogenesis or an increase in myocardial function [P.B. Shah, D.W. Losordo, Non-viral vectors for gene therapy: clinical trials in cardiovascular disease, Adv Genet, 54, (2005) 339-361]. This may be due in part to reduced transfection efficiency but can also be attributed to use of suboptimal candidate genes. Currently, polymeric non-viral gene delivery to cardiac myocardium remains underrepresented. In the past decade several advances in non-viral vector development has demonstrated increased transfection efficiency [O.J. Muller, H.A. Katus, R. Bekeredjian, Targeting the heart with gene therapy-optimized gene delivery methods, Cardiovasc Res, 73(3), (2007) 453-462]. Of these polymers, those that employ lipid modifications to improve transfection or target cardiovascular tissues have proven themselves to be extremely beneficial. Water-soluble lipopolymer (WSLP) consists of a low molecular weight branched PEI (1800) and cholesterol. The cholesterol moiety adds extra condensation by forming stable micellular complexes and was later employed for myocardial gene therapy to exploit the high expression of lipoprotein lipase found within cardiac tissue. Use of WSLP to deliver hypoxia-responsive driven expression of hVEGF to ischemic rabbit myocardium has proven to provide for even better expression in cardiovascular cells than Terplex and has demonstrated a significant reduction in infarct size (13+/-4%, p<0.001) over constitutive VEGF expression (32+/-7%, p=0.007) and sham-injected controls (48+/-7%). A significant reduction in apoptotic values and an increase in capillary growth were also seen in surrounding tissue. Recently, investigations have begun using bioreducible polymers made of poly(amido polyethylenimines) (SS-PAEI). SS-PAEIs breakdown within the cytoplasm through inherent redox mechanisms and provide for high transfection efficiencies (upwards to 60% in cardiovascular cell types) with little to no demonstrable toxicity. In vivo transfections in normoxic and hypoxic rabbit myocardium have proven to exceed those results of WSLP transfections by 2-5 fold [L.V. Christensen, et al., Reducible poly(amido ethylenediamine) for hypoxia-inducible VEGF delivery, J Control Release, 118(2), (2007) 254-261]. This new breed of polymer(s) may allow for decreased doses and use of new molecular mechanisms not previously available due to low transfection efficiencies. Little development has been seen in the use of new gene agents for treatment of myocardial ischemia and infarction. Current treatment consists of using mitogenic factors, described decades earlier, alone or in combination to spur angiogenesis or modulating intracellular Ca2+ homeostasis through SERCA2a but to date, failed to demonstrate clinical efficacy. Recent data suggests that axonal guidance cues also act on vasculature neo-genesis and provide a new means of investigation for treatment.

[Communicative and social behavior of speech disordered children].

PubMed

Eiberger, W; Hügel, H

1978-07-01

The spheres covering behaviour disorders, social behaviour and communicative behaviour of speech impaired pupils which until now have been analyzed on a more theoretical level, ought to be studied using psychometric testing procedures and an esperimental observational situation in order to gain base data with which to set up a concrete catalogue of aims (learning program) based on the deficits thereby obtained. The study took place at the special school in Esslinger-Berkheim (Baden-Wurttemberg). By taking into account relevant specialized literature and the results of other studies, the following general hypotheses were advanced, namely, that the communication of speech handicapped children is troubled in respect of its content and relation, and that their social behaviour shows more egoistic than cooperative features. In order to determine social motivations and attitudes, we used Muller's "Social Motivation Test" (SMT) and Jorger's "Group test for the social attitude" (S-E-T). Due to the inconsistency between the attitudes measured by means of psychometric methods and the sbusequent free and genuine behaviour, an observational situation was developed during which the pupils, either in pairs or in groups of four and using puppets, took turns in thinking up a story, discussing the plot, roles, etc. and finally putting on the play. The whole was then analyzed by means of tape recordings and film shots, the interaction of the communicating partners being analyzed and categorized in two separate assessment stages: communicative behaviour and social behaviour. The pragmatic axioms of P. Watzlawick, the communication researcher, functioned as theoretical background. Flanders's linear time diagram was used as assessment system. Communicative and social learning aims were prepared in accordance with confirming hypotheses to enable a "preliminary area" for the practical work in (special) education to be defined. In addition, a rough outline was made of the conditional areas pertaining to social and communicative education of the speech impaired for the purpose of carrying out a systematic change.

Introducing a boreal wetland model within the Earth System model framework

NASA Astrophysics Data System (ADS)

Getzieh, R. J.; Brovkin, V.; Reick, C.; Kleinen, T.; Raddatz, T.; Raivonen, M.; Sevanto, S.

2009-04-01

Wetlands of the northern high latitudes with their low temperatures and waterlogged conditions are prerequisite for peat accumulation. They store at least 25% of the global soil organic carbon and constitute currently the largest natural source of methane. These boreal and subarctic peat carbon pools are sensitive to climate change since the ratio of carbon sequestration and emission is closely dependent on hydrology and temperature. Global biogeochemistry models used for simulations of CO2 dynamics in the past and future climates usually ignore changes in the peat storages. Our approach aims at the evaluation of the boreal wetland feedback to climate through the CO2 and CH4 fluxes on decadal to millennial time scales. A generic model of organic matter accumulation and decay in boreal wetlands is under development in the MPI for Meteorology in cooperation with the University of Helsinki. Our approach is to develop a wetland model which is consistent with the physical and biogeochemical components of the land surface module JSBACH as a part of the Earth System model framework ECHAM5-MPIOM-JSBACH. As prototypes, we use modelling approach by Frolking et al. (2001) for the peat dynamics and the wetland model by Wania (2007) for vegetation cover and plant productivity. An initial distribution of wetlands follows the GLWD-3 map by Lehner and Döll (2004). First results of the modelling approach will be presented. References: Frolking, S. E., N. T. Roulet, T. R. Moore, P. J. H. Richard, M. Lavoie and S. D. Muller (2001): Modeling Northern Peatland Decomposition and Peat Accumulation, Ecosystems, 4, 479-498. Lehner, B., Döll P. (2004): Development and validation of a global database of lakes, reservoirs and wetlands. Journal of Hydrology 296 (1-4), 1-22. Wania, R. (2007): Modelling northern peatland land surface processes, vegetation dynamics and methane emissions. PhD thesis, University of Bristol, 122 pp.

Percolation on fitness landscapes: effects of correlation, phenotype, and incompatibilities

PubMed Central

Gravner, Janko; Pitman, Damien; Gavrilets, Sergey

2009-01-01

We study how correlations in the random fitness assignment may affect the structure of fitness landscapes, in three classes of fitness models. The first is a phenotype space in which individuals are characterized by a large number n of continuously varying traits. In a simple model of random fitness assignment, viable phenotypes are likely to form a giant connected cluster percolating throughout the phenotype space provided the viability probability is larger than 1/2n. The second model explicitly describes genotype-to-phenotype and phenotype-to-fitness maps, allows for neutrality at both phenotype and fitness levels, and results in a fitness landscape with tunable correlation length. Here, phenotypic neutrality and correlation between fitnesses can reduce the percolation threshold, and correlations at the point of phase transition between local and global are most conducive to the formation of the giant cluster. In the third class of models, particular combinations of alleles or values of phenotypic characters are “incompatible” in the sense that the resulting genotypes or phenotypes have zero fitness. This setting can be viewed as a generalization of the canonical Bateson-Dobzhansky-Muller model of speciation and is related to K- SAT problems, prominent in computer science. We analyze the conditions for the existence of viable genotypes, their number, as well as the structure and the number of connected clusters of viable genotypes. We show that analysis based on expected values can easily lead to wrong conclusions, especially when fitness correlations are strong. We focus on pairwise incompatibilities between diallelic loci, but we also address multiple alleles, complex incompatibilities, and continuous phenotype spaces. In the case of diallelic loci, the number of clusters is stochastically bounded and each cluster contains a very large sub-cube. Finally, we demonstrate that the discrete NK model shares some signature properties of models with high correlations. PMID:17692873

Cryogenic two-phase flow during chilldown: Flow transition and nucleate boiling heat transfer

NASA Astrophysics Data System (ADS)

Jackson, Jelliffe Kevin

The recent interest in space exploration has placed a renewed focus on rocket propulsion technology. Cryogenic propellants are the preferred fuel for rocket propulsion since they are more energetic and environmentally friendly compared with other storable fuels. Voracious evaporation occurs while transferring these fluids through a pipeline that is initially in thermal equilibrium with the environment. This phenomenon is referred to as line chilldown. Large temperature differences, rapid transients, pressure fluctuations and the transition from the film boiling to the nucleate boiling regime characterize the chilldown process. Although the existence of the chilldown phenomenon has been known for decades, the process is not well understood. Attempts have been made to model the chilldown process; however the results have been fair at best. A major shortcoming of these models is the use of correlations that were developed for steady, non-cryogenic flows. The development of reliable correlations for cryogenic chilldown has been hindered by the lack of experimental data. An experimental facility was constructed that allows the flow structure, the temperature history and the pressure history to be recorded during the line chilldown process. The temperature history is then utilized in conjunction with an inverse heat conduction procedure that was developed, which allows the unsteady heat transfer coefficient on the interior of the pipe wall to be extracted. This database is used to evaluate present predictive models and correlations for flow regime transition and nucleate boiling heat transfer. It is found that by calibrating the transition between the stratified-wavy and the intermittent/annular regimes of the Taitel and Dukler flow regime map, satisfactory predictions are obtained. It is also found that by utilizing a simple model that includes the effect of flow structure and incorporating the enhancement provided by the local heat flux, significant improvement in the predictive capabilities of the Muller-Steinhagen and Jamialahmadi correlation for nucleate flow boiling is achieved.

[Comparative studies of methods of salmonella enrichment (author's transl)].

PubMed

Pietzsch, O; Kretschmer, F J; Bulling, E

1975-07-01

Eight different methods of salmonella enrichment were compared in two series of experiments involving 100 samples of whole-egg powder and 80 samples of frozen whole liquid egg, respectively. 66 out of a total of 100 samples of whole-egg powder had been artificially infected with varying numbers of S. typhi-murium; 60 out of 80 samples of frozen whole liquid egg were found to be naturally infected with various salmonella species. 3 of the 8 methods (Table 1) were compared within an international collaborative study with 14 laboratories in 11 countries participating. A reduction of the pre-enrichment period from 18 to 6 hours and of volumes used in pre-enrichment and selective enrichment from 10 and 100 ml, respectively to 1 and 10 ml, respectively were found to have adverse influence upon the result of isolations, in particular in the case of weakly infected samples. In contrast, extended incubation over 48 hours as well as preparation of two sub-cultures on solid selective media following incubation of enrichment cultures over 18-24 hours and 42-48 hours, respectively always resulted in a certain increase of salmonella yield which, however, exhibited gradual differences for the individual methods examined. Preparation of a 2nd sub-culture meant, in particular, a decisive improvement of the result of isolations from artificially infected samples if selenite-cystine enrichment volumes were 10 and 100 ml, respectively. The best results could be obtained by means of the following methods of enrichment: Pre-enrichment of material in buffered peptone water at 37 degrees C over 18 hours; pipetting of 10 ml inoculated and incubated pre-enriched material into 100 ml selenite-cystine or tetrathionate enrichment medium according to MULLER-KAUFFMANN; onward incubation of the enrichment culture at 43 degrees C over 48 hours; and preparation of sub-cultures on solid selective media after 24 and 48 hours. The method using tetrathionate enrichment medium was found to be most expensive, results, however, were the most consistent ones.

Genomic networks of hybrid sterility.

PubMed

Turner, Leslie M; White, Michael A; Tautz, Diethard; Payseur, Bret A

2014-02-01

Hybrid dysfunction, a common feature of reproductive barriers between species, is often caused by negative epistasis between loci ("Dobzhansky-Muller incompatibilities"). The nature and complexity of hybrid incompatibilities remain poorly understood because identifying interacting loci that affect complex phenotypes is difficult. With subspecies in the early stages of speciation, an array of genetic tools, and detailed knowledge of reproductive biology, house mice (Mus musculus) provide a model system for dissecting hybrid incompatibilities. Male hybrids between M. musculus subspecies often show reduced fertility. Previous studies identified loci and several X chromosome-autosome interactions that contribute to sterility. To characterize the genetic basis of hybrid sterility in detail, we used a systems genetics approach, integrating mapping of gene expression traits with sterility phenotypes and QTL. We measured genome-wide testis expression in 305 male F2s from a cross between wild-derived inbred strains of M. musculus musculus and M. m. domesticus. We identified several thousand cis- and trans-acting QTL contributing to expression variation (eQTL). Many trans eQTL cluster into eleven 'hotspots,' seven of which co-localize with QTL for sterility phenotypes identified in the cross. The number and clustering of trans eQTL-but not cis eQTL-were substantially lower when mapping was restricted to a 'fertile' subset of mice, providing evidence that trans eQTL hotspots are related to sterility. Functional annotation of transcripts with eQTL provides insights into the biological processes disrupted by sterility loci and guides prioritization of candidate genes. Using a conditional mapping approach, we identified eQTL dependent on interactions between loci, revealing a complex system of epistasis. Our results illuminate established patterns, including the role of the X chromosome in hybrid sterility. The integrated mapping approach we employed is applicable in a broad range of organisms and we advocate for widespread adoption of a network-centered approach in speciation genetics.

Seasonal variations of alkenones and UK37 in the Chesapeake Bay water column

USGS Publications Warehouse

Mercer, J.L.; Zhao, M.; Colman, Steven M.

2005-01-01

Alkenone unsaturation indices (UK37 and U K???37) have long been used as proxies for surface water temperature in the open ocean. Recent studies have suggested that in other marine environments, variables other than temperature may affect both the production of alkenones and the values of the indices. Here, we present the results of a reconnaissance field study in which alkenones were extracted from particulate matter filtered from the water column in Chesapeake Bay during 2000 and 2001. A multivariate analysis shows a strong positive correlation between UK37 (and UK???37) values and temperature, and a significant negative correlation between UK37 (and UK???37) values and nitrate concentrations. However, temperature and nitrate concentrations also co-vary significantly. The temperature vs. UK37 relationships (UK37=0.018 (T)-0.162, R2=0.84, UK???37=0.013 (T)-0.04, R2=0.80) have lower slopes than the open-ocean equations of Prahl et al. [1988. Further evaluation of long-chain alkenones as indicators of paleoceanographic conditions. Geochimica et Cosmochimica Acta 52, 2303-2310] and Mu??ller et al. [1998. Calibration of the alkenone paleotemperature index UK???37 based on core-tops from the eastern South Atlantic and the global ocean (60??N-60??S). Geochimica et Cosmochimica Acta 62, 1757-1772], but are similar to the relationships found in controlled studies with elevated nutrient levels and higher nitrate:phosphate (N:P) ratios. This implies that high nutrient levels in Chesapeake Bay have either lowered the UK37 vs. temperature slope, or nutrient levels are the main controller of the U K37 index. In addition, particularly high abundances (>5% of total C37 alkenones) of the tetra-unsaturated ketone, C37:4, were found when water temperatures reached 25??C or higher, thus posing further questions about the controls on alkenone production as well as the biochemical roles of alkenones. ?? 2005 Elsevier Ltd. All rights reserved.

Comparative evaluation of MRSA nasal colonization epidemiology in the urban and rural secondary school community of Kurdistan, Iraq.

PubMed

Hussein, Nawfal R; Basharat, Zarrin; Muhammed, Ary H; Al-Dabbagh, Samim A

2015-01-01

To study the nasal carriage rate of Staphylococcus aureus (S. aureus) (including methicillin-resistant strains) in secondary school community of the urban and rural districts of the Kurdistan region of Iraq, a cross-sectional population based survey was carried out in the city Duhok and rural areas of Amedya, Akre and Zakho. Nasal swabs were obtained from nostrils of 509 students aged 14-23 years. Resistance to methicillin was assessed by Kirby-Bauer disk diffusion and agar dilution assay. Vancomycin sensitivity was also tested on Muller-Hinton agar. It was found that the frequency of overall S. aureus nasal carriage (SANC) was 17.75% (90/509, CI95, 14.58-21.42%). In urban areas, the carriage rate was 20.59% (49/239, CI95, 15.64-26.29%), whereas it was 15.24% (41/270, CI95, 11.17-20.10%) in rural districts. The frequency of methicillin-resistant S. aureus (MRSA) among the isolated strains was found to be 2.04% (1/49) and 21.95% (9/41) in urban and rural areas respectively. It was found that in urban residents, the odd ratio (OR) of acquiring SANC was 1.44 (CI95, 0.91-2.27%) and risk ratio (RR) was at least 1.35 (CI95, 0.92-1.96%) while OR decreased to 0.12 (CI95, 0.01-0.96%) for MRSA carriage. Hence, the S. aureus carriage rate was higher in urban districts compared to rural areas while more MRSA were found in rural areas compared to urban districts. All studied strains were sensitive to vancomycin. This study provided baseline information for S. aureus nasal colonization in the region. Also, it showed that living in rural areas increased the odds of MRSA colonization. More attention should be paid to control MRSA colonization in rural communities.

The Effectiveness of TAG or Guard-Gates in SET Suppression Using Delay and Dual-Rail Configurations at 0.35 microns

NASA Technical Reports Server (NTRS)

Shuler, Robert L.; Balasubramanian, Anupama; Narasimham, Balaji; Bhuva, Bharat; O'Neill, Patrick M.; Kouba, Coy

2006-01-01

Design options for decreasing the susceptibility of integrated circuits to Single Event Upset (SEU) fall into two categories: (1) increasing the critical charge to cause an upset at a particular node, and (2) employing redundancy to mask or correct errors. With decreasing device sizes on an Integrated Circuit (IC), the amount of charge required to represent a logic state has steadily reduced. Critical charge methods such as increasing drive strength or increasing the time required to change state as in capacitive or resistive hardening or delay based approaches extract a steadily increasing penalty as a percentage of device resources and performance. Dual redundancy is commonly assumed only to provide error detection with Triple Modular Redundancy (TMR) required for correction, but less well known methods employ dual redundancy to achieve full error correction by voting two inputs with a prior state to resolve ambiguity. This requires special circuits such as the Whitaker latch [1], or the guard-gate [2] which some of us have called a Transition AND Gate (TAG) [3]. A 2-input guard gate is shown in Figure 1. It is similar to a Muller Completion Element [4] and relies on capacitance at node "out" to retain the prior state when inputs disagree, while eliminating any output buffer which would be susceptible to radiation strikes. This paper experimentally compares delay based and dual rail flip-flop designs wherein both types of circuits employ guard-gates to optimize layout and performance, and draws conclusions about design criteria and suitability of each option. In both cases a design goal is protection against Single Event Transients (SET) in combinational logic as well as SEU in the storage elements. For the delay based design, it is also a goal to allow asynchronous clear or preset inputs on the storage elements, which are often not available in radiation tolerant designs.

The origin of modern plant virology.

PubMed

Pennazio, S; Conti, M

2002-10-01

Plant virology, born with Mayer's work, saw a first (embryonic) phase of development during two decades (1900-1920) with outstanding contributions from Dimitri Ivanovski, Martinus Beijerinck, Erwin Baur and Harry Allard. Between 1920 and 1930 a second phase saw the elaboration of surprising hypotheses concerning the enigmatic nature of viruses and experimental evidence of great stress was obtained. Revolutionary renewal began from the mid-1930s on the basis of a body of knowledge which was organically assembled into the first textbook of plant virology published by Kenneth Smith in 1933. In 1922, the geneticist Hermann Muller put forward the hypothesis that considered viruses as possible genes. The theory was resumed in an apparently independent way by Benjamin Duggar and Joanne Karrer Armstrong in 1923, who considered TMV a biocolloidal self-reproducing protein, like genes appeared to be. This hypothesis, even if neglected by virologists, anticipated by some decades the functional nature of viruses and represented the first conceptual response to virus enigma. Considerable experimental results were obtained by James Johnson, who showed that plants could be infected by different viruses and who introduced a first rational system of plant virus classification. Harold McKinney showed that TMV could mutate. Harold Storey, Kenneth Smith and Harry Severin demonstrated that several viruses could be transmitted by insects and supplied the first interpretation of the relationship between virus and insect. Mayme Dvorak and Helen Purdy obtained the first experimental evidence of the antigenic power of plant viruses. Virus purification, first tentatively accomplished with physical methods, was brilliantly performed by chemical means. Finally, Francis Holmes elaborated the first suitable test to estimate virus infectivity. The evolution of plant virology from an empirical discipline to a biological science took place thanks to the work of one group of American and English scientists who must be regarded as the fathers of modern plant virology.

Complex fold and thrust belt structural styles: Examples from the Greater Juha area of the Papuan Fold and Thrust Belt, Papua New Guinea

NASA Astrophysics Data System (ADS)

Mahoney, Luke; Hill, Kevin; McLaren, Sandra; Hanani, Amanda

2017-07-01

The remote and inhospitable Papuan Fold Belt in Papua New Guinea is one of the youngest yet least well-documented fold and thrust belts on Earth. Within the frontal Greater Juha area we have carried out >100 km of geological traverses and associated analyses that have added significantly to the contemporary geological and geophysical dataset. Our structural analysis provides evidence of major inversion, detachment and triangle zone faults within the uplifted Eastern Muller Ranges. We have used the dataset to develop a quasi-3D model for the Greater Juha area, with associated cross-sections revealing that the exposed Cenozoic Darai Limestone is well-constrained with very low shortening of 12.6-21.4% yet structures are elevated up to 7 km above regional. We suggest the inversion of pre-existing rift architecture is the primary influence on the evolution of the area and that structures link to the surface via triangle zones and detachment faults within the incompetent Mesozoic passive-margin sedimentary sequence underlying competent Darai Limestone. Arc-normal oriented structures, dominantly oblique dextral, up-to-the-southeast, are pervasive across a range of scales and are here interpreted to relate at depth to weakened pre-existing basement cross-structures. It is proposed that Palaeozoic basement fabric controlled the structural framework of the basin during Early Mesozoic rifting forming regional-scale accommodation zones and related local-scale transfer structures that are now expressed as regional-scale arc-normal lineaments and local-scale arc-normal structures, respectively. Transfer structures, including complexly breached relay ramps, utilise northeast-southwest striking weaknesses associated with the basement fabric, as a mechanism for accommodating displacement along major northwest-southeast striking normal faults. These structures have subsequently been inverted to form arc-normal oriented zones of tear faulting that accommodate laterally variable displacement along inversion faults and connected thrust structures.

Evaluation of Radiation Exposure to Staff and Environment Dose from [18F]-FDG in PET/CT and Cyclotron Center using Thermoluminescent Dosimetry

PubMed Central

Zargan, S.; Ghafarian, P.; Shabestani Monfared, A.; Sharafi, A.A.; Bakhshayeshkaram, M.; Ay, M.R.

2017-01-01

Background: PET/CT imaging using [18F]-FDG is utilized in clinical oncology for tumor detecting, staging and responding to therapy procedures. Essential consideration must be taken for radiation staff due to high gamma radiation in PET/CT and cyclotron center. The aim of this study was to assess the staff exposure regarding whole body and organ dose and to evaluate environment dose in PET/CT and cyclotron center. Materials and Methods: 80 patients participated in this study. Thermoluminescence, electronic personal dosimeter and Geiger-Muller dosimeter were also utilized for measurement purpose. Results: The mean annual equivalent organ dose for scanning operator with regard to lens of eyes, thyroid, breast and finger according to mean±SD value, were 0.262±0.044, 0.256±0.046, 0.257±0.040 and 0.316±0.118, respectively. The maximum and minimum estimated annual whole body doses were observed for injector and the chemist group with values of (3.98±0.021) mSv/yr and (1.64±0.014) mSv/yr, respectively. The observed dose rates were 5.67 µSv/h in uptake room at the distance of 0.5 meter from the patient whereas the value 4.94 and 3.08 µSv/h were recorded close to patient’s head in PET/CT room and 3.5 meter from the reception desk. Conclusion: In this study, the injector staff and scanning operator received the first high level and second high level of radiation. This study confirmed that low levels of radiation dose were received by all radiation staff during PET/CT procedure using 18F-FDG due to efficient shielding and using trained radiation staff in PET/CT and cyclotron center of Masih Daneshvari hospital. PMID:28451574

Comparative Evaluation of MRSA Nasal Colonization Epidemiology in the Urban and Rural Secondary School Community of Kurdistan, Iraq

PubMed Central

Hussein, Nawfal R.; Basharat, Zarrin; Muhammed, Ary H.; Al-Dabbagh, Samim A.

2015-01-01

Background To study the nasal carriage rate of Staphylococcus aureus (S. aureus) (including methicillin-resistant strains) in secondary school community of the urban and rural districts of the Kurdistan region of Iraq, a cross-sectional population based survey was carried out in the city Duhok and rural areas of Amedya, Akre and Zakho. Methods Nasal swabs were obtained from nostrils of 509 students aged 14-23 years. Resistance to methicillin was assessed by Kirby-Bauer disk diffusion and agar dilution assay. Vancomycin sensitivity was also tested on Muller-Hinton agar. Results It was found that the frequency of overall S. aureus nasal carriage (SANC) was 17.75% (90/509, CI95, 14.58–21.42%). In urban areas, the carriage rate was 20.59% (49/239, CI95, 15.64–26.29%), whereas it was 15.24% (41/270, CI95, 11.17–20.10%) in rural districts. The frequency of methicillin-resistant S. aureus (MRSA) among the isolated strains was found to be 2.04% (1/49) and 21.95% (9/41) in urban and rural areas respectively. It was found that in urban residents, the odd ratio (OR) of acquiring SANC was 1.44 (CI95, 0.91-2.27%) and risk ratio (RR) was at least 1.35 (CI95, 0.92-1.96%) while OR decreased to 0.12 (CI95, 0.01-0.96%) for MRSA carriage. Hence, the S. aureus carriage rate was higher in urban districts compared to rural areas while more MRSA were found in rural areas compared to urban districts. All studied strains were sensitive to vancomycin. Conclusion This study provided baseline information for S. aureus nasal colonization in the region. Also, it showed that living in rural areas increased the odds of MRSA colonization. More attention should be paid to control MRSA colonization in rural communities. PMID:25932644

Patterns of spiral wave attenuation by low-frequency periodic planar fronts

NASA Astrophysics Data System (ADS)

de la Casa, Miguel A.; de la Rubia, F. Javier; Ivanov, Plamen Ch.

2007-03-01

There is evidence that spiral waves and their breakup underlie mechanisms related to a wide spectrum of phenomena ranging from spatially extended chemical reactions to fatal cardiac arrhythmias [A. T. Winfree, The Geometry of Biological Time (Springer-Verlag, New York, 2001); J. Schutze, O. Steinbock, and S. C. Muller, Nature 356, 45 (1992); S. Sawai, P. A. Thomason, and E. C. Cox, Nature 433, 323 (2005); L. Glass and M. C. Mackey, From Clocks to Chaos: The Rhythms of Life (Princeton University Press, Princeton, 1988); R. A. Gray et al., Science 270, 1222 (1995); F. X. Witkowski et al., Nature 392, 78 (1998)]. Once initiated, spiral waves cannot be suppressed by periodic planar fronts, since the domains of the spiral waves grow at the expense of the fronts [A. N. Zaikin and A. M. Zhabotinsky, Nature 225, 535 (1970); A. T. Stamp, G. V. Osipov, and J. J. Collins, Chaos 12, 931 (2002); I. Aranson, H. Levine, and L. Tsimring, Phys. Rev. Lett. 76, 1170 (1996); K. J. Lee, Phys. Rev. Lett. 79, 2907 (1997); F. Xie, Z. Qu, J. N. Weiss, and A. Garfinkel, Phys. Rev. E 59, 2203 (1999)]. Here, we show that introducing periodic planar waves with long excitation duration and a period longer than the rotational period of the spiral can lead to spiral attenuation. The attenuation is not due to spiral drift and occurs periodically over cycles of several fronts, forming a variety of complex spatiotemporal patterns, which fall into two distinct general classes. Further, we find that these attenuation patterns only occur at specific phases of the descending fronts relative to the rotational phase of the spiral. We demonstrate these dynamics of phase-dependent spiral attenuation by performing numerical simulations of wave propagation in the excitable medium of myocardial cells. The effect of phase-dependent spiral attenuation we observe can lead to a general approach to spiral control in physical and biological systems with relevance for medical applications.

Genomic Networks of Hybrid Sterility

PubMed Central

Turner, Leslie M.; White, Michael A.; Tautz, Diethard; Payseur, Bret A.

2014-01-01

Hybrid dysfunction, a common feature of reproductive barriers between species, is often caused by negative epistasis between loci (“Dobzhansky-Muller incompatibilities”). The nature and complexity of hybrid incompatibilities remain poorly understood because identifying interacting loci that affect complex phenotypes is difficult. With subspecies in the early stages of speciation, an array of genetic tools, and detailed knowledge of reproductive biology, house mice (Mus musculus) provide a model system for dissecting hybrid incompatibilities. Male hybrids between M. musculus subspecies often show reduced fertility. Previous studies identified loci and several X chromosome-autosome interactions that contribute to sterility. To characterize the genetic basis of hybrid sterility in detail, we used a systems genetics approach, integrating mapping of gene expression traits with sterility phenotypes and QTL. We measured genome-wide testis expression in 305 male F2s from a cross between wild-derived inbred strains of M. musculus musculus and M. m. domesticus. We identified several thousand cis- and trans-acting QTL contributing to expression variation (eQTL). Many trans eQTL cluster into eleven ‘hotspots,’ seven of which co-localize with QTL for sterility phenotypes identified in the cross. The number and clustering of trans eQTL—but not cis eQTL—were substantially lower when mapping was restricted to a ‘fertile’ subset of mice, providing evidence that trans eQTL hotspots are related to sterility. Functional annotation of transcripts with eQTL provides insights into the biological processes disrupted by sterility loci and guides prioritization of candidate genes. Using a conditional mapping approach, we identified eQTL dependent on interactions between loci, revealing a complex system of epistasis. Our results illuminate established patterns, including the role of the X chromosome in hybrid sterility. The integrated mapping approach we employed is applicable in a broad range of organisms and we advocate for widespread adoption of a network-centered approach in speciation genetics. PMID:24586194

Using appreciative inquiry to help students identify strategies to overcome handicaps of their learning styles.

PubMed

Kumar, Latha Rajendra; Chacko, Thomas Vengail

2012-01-01

In India, as in some other neighboring Asian countries, students and teachers are generally unaware of the differences in the learning styles among learners, which can handicap students with learning styles alien to the common teaching/learning modality within the institution. This study aims to find out whether making students aware of their learning styles and then using the Appreciative Inquiry approach to help them discover learning strategies that worked for them and others with similar learning styles within the institution made them perceive that this experience improved their learning and performance in exams. The visual, auditory, read-write, and kinesthetic (VARK) inventory of learning styles questionnaire was administered to all 100 first-year medical students of the Father Muller's Medical College in Mangalore India to make them aware of their individual learning styles. An Appreciate Inquiry intervention was administered to 62 student volunteers who were counseled about the different learning styles and their adaptive strategies. Pre and post intervention change in student's perception about usefulness of knowing learning styles on their learning, learning behavior, and performance in examinations was collected from the students using a prevalidated questionnaire. Post intervention mean scores showed a significant change (P < 0.0001) in student's self-perceptions about usefulness of knowing one's learning style and discovering strategies that worked within the institutional environment. There was agreement among students that the intervention helped them become more confident in learning (84%), facilitating learning in general (100%), and in understanding concepts (100%). However, only 29% of the students agreed that the intervention has brought about their capability improvement in application of learning and 31% felt it improved their performance in exams. Appreciate Inquiry was perceived as useful in helping students discover learning strategies that work for different individual learning styles and sharing them within the group helped students choose strategies to help overcome the handicap presented by the school's teaching methods.

Mechanisms of ripple migration on a natural sand bed under waves

NASA Astrophysics Data System (ADS)

Carlson, E.; Foster, D. L.

2016-02-01

In nearshore environments, the wave bottom boundary layer is of particular importance to bedform migration and evolution as it is the location of energy transfer from the water column to the bed. This effort examines the mechanisms responsible for bedform evolution and migration. In a field scale laboratory study, sand ripple dynamics were measured using particle image velocimetry. Both monotonic (T = 4 s, 8 s), bimodal (wave pair T = 3.7, 4.3 s), and solitary wave cases were examined. Bedform states included orbital and anorbital rippled beds with wavelengths ranging from 5 to 15 cm. During cases of moderately high energy, time series of instantaneous ripple migration rates oscillated with the same frequency as the surface waves. The oscillatory ripple migration signature was asymmetric, with higher amplitudes during onshore directed movement. This asymmetry leads to a net onshore migration, ranging from 0.1 to 0.6 cm/min in the wave conditions mentioned. The cyclic motion of the ripple field was compared to concomitant transfer mechanisms affecting the boundary layer dynamics including: bed shear stress, coherent structure generation, and free stream velocity. Coherent structures were identified using the swirling strength criterion, and were present during each half wave developing in the ripple troughs. Two estimates of bed shear stress were made: 1) Meyer-Peter Muller method using the bed migration to determine the necessary stress and 2) double averaging of the velocity field and partitioning into components of stress, following the methods of Rodriguez-Abudo and Foster (2014). Peak ripple migration rates occurred during strengthening onshore flow, which coincides with peak bed shear stresses and the onset of coherent structure formation. Higher energy bimodal wave groups caused periods of high suspension which were coincident with peak onshore migrations, during the low velocity periods of the bimodal forcing the bed did not migrate.

BCL2 oncogene translocation is mediated by a chi-like consensus

PubMed Central

1992-01-01

Examination of 64 translocations involving the major breakpoint region (mbr) of the BCL2 oncogene and the immunoglobulin heavy chain locus identified three short (14, 16, and 18 bp) segments within the mbr at which translocations occurred with very high frequency. Each of these clusters was associated with a 15-bp region of sequence homology, the principal one containing an octamer related to chi, the procaryotic activator of recombination. The presence of short deletions and N nucleotide additions at the breakpoints, as well as involvement of JH and DH coding regions, suggested that these sequences served as signals capable of interacting with the VDJ recombinase complex, even though no homology with the traditional heptamer/spacer/nonamer (IgRSS) existed. Furthermore, the BCL2 signal sequences were employed in a bidirectional fashion and could mediate recombination of one mbr region with another. Segments homologous to the BCL2 signal sequences flanked individual members of the XP family of diversity gene segments, which were themselves highly overrepresented in the reciprocal products (18q-) of BCL2 translocation. We propose that the chi-like signal sequences of BCL2 represent a distinct class of recognition sites for the recombinase complex, responsible for initiating interactions between regions of DNA separated by great distances, and that BCL2 translocation begins by a recombination event between mbr and DXP chi signals. Since recombinant joints containing chi, not IgRSS, occur in brain cells expressing RAG-1 (Matsuoka, M., F. Nagawa, K. Okazaki, L. Kingsbury, K. Yoshida, U. Muller, D. T. Larue, J. A. Winer, and H. Sakano. 1991. Science [Wash. DC]. 254:81; reference 1), we further suggest that the product of this gene could mediate both BCL2 translocation and the first step of normal DJ assembly through the creation of chi joints, rather than signal or coding joints. PMID:1588282

Expression, subcellular localization, and regulation of sigma receptor in retinal muller cells.

PubMed

Jiang, Guoliang; Mysona, Barbara; Dun, Ying; Gnana-Prakasam, Jaya P; Pabla, Navjotsin; Li, Weiguo; Dong, Zheng; Ganapathy, Vadivel; Smith, Sylvia B

2006-12-01

Sigma receptors (sigmaRs) are nonopioid, nonphencyclidine binding sites with robust neuroprotective properties. Type 1 sigmaR1 (sigmaR1) is expressed in brain oligodendrocytes, but its expression and binding capacity have not been analyzed in retinal glial cells. This study examined the expression, subcellular localization, binding activity, and regulation of sigmaR1 in retinal Müller cells. Primary mouse Müller cells (MCs) were analyzed by RT-PCR, immunoblotting, and immunocytochemistry for the expression of sigmaR1, and data were compared with those of the rat Müller cell line (rMC-1) and the rat ganglion cell line (RGC-5). Confocal microscopy was used to determine the subcellular sigmaR1 location in primary mouse MCs. Membranes prepared from these cells were used for binding assays with [3H]-pentazocine (PTZ). The kinetics of binding, the ability of various sigmaR1 ligands to compete with sigmaR1 binding, and the effects of donated nitric oxide (NO) and reactive oxygen species (ROS) on binding were examined. sigmaR1 is expressed in primary mouse MCs and is localized to the nuclear and endoplasmic reticulum membranes. Binding assays showed that in primary mouse MCs, rMC-1, and RGC-5, the binding of PTZ was saturable. [3H]-PTZ bound with high affinity in RGC-5 and rMC-1 cells, and the binding was similarly robust in primary mouse MCs. Competition studies showed marked inhibition of [3H]-PTZ binding in the presence of sigmaR1-specific ligands. Incubation of cells with NO and ROS donors markedly increased sigmaR1 binding activity. MCs express sigmaR1 and demonstrate robust sigmaR1 binding activity, which is inhibited by sigmaR1 ligands and is stimulated during oxidative stress. The potential of Müller cells to bind sigmaR1 ligands may prove beneficial in retinal degenerative diseases such as diabetic retinopathy.

Bacterial isolates and their antimicrobial susceptibility patterns among pediatric patients with urinary tract infections.

PubMed

Ayelign, Birhanu; Abebe, Betelehem; Shibeshi, Adugna; Meshesha, Sosina; Shibabaw, Tewodros; Addis, Zelalem; Gelaw, Aschalew; Dagnew, Mulat

2018-01-01

Urinary tract infection is a common pediatric problem with the potential to produce long-term morbidity. Therefore, appropriate diagnosis and prompt treatment is required. However, studies about magnitude of uropathogenicity and antimicrobial resistance pattern of pediatric urinary tract infection (UTI) are lacking in resource limited countries including Ethiopia. This study was aimed to determine bacterial isolates, antimicrobial susceptibility pattern among pediatric patients with UTI. A cross- sectional study was conducted. Pathogenic bacterial isolates were identified by culture and biochemical methods following standard procedures. Antimicrobial susceptibility testing of the isolates for commonly used antibiotics was done using the standard disc diffusion method on Muller Hinton agar. Associations between dependent and independent variables were measured using chi-square test and within 95% confidence interval. P values <0.05 were considered as statistically significant. A total of 310 pediatric patients were included in the study, and 82 (26.45%) bacterial isolates were detected. Gram- negative bacteria were predominant etiologic agents of UTI in this study. E. coli was the most frequently occurring pathogen (n=45; 54.88%) followed by S. aureus and P.aeruginosa (n=8; 9.75% for both), P. vulgaris , P.aeruginosa (n=4; 4.88%, for both) and Enterococcus species (n=3; 3.66%). All K. pneumoniae , P. mirabilis , and K. ozanae straines were 100% resistance to ampicillin, followed by P. aeruginosa (87.5%) and E. coli (69%). While all Gram- positive bacterial isolates were 100% sensitive to ciprofloxacin. Malnutrition, history of catherization and previous history of UTI were independently associated with UTI (p=0.000). There was a high prevalence of uropathogenic bacteria and drug resistance particularly to ampicillin (72%) and tetracycline (37.80%). This condition indicates that antibiotic selection should be based on knowledge of the local prevalence of bacterial organisms and antibiotic sensitivities rather than empirical treatment.

A refined age grid for the Central North Atlantic

NASA Astrophysics Data System (ADS)

Luis, J. M.; Miranda, J.

2012-12-01

We present a digital model for the age of the Central North Atlantic as a geographical grid with 1 arc minute resolution. Our seafloor isochrons are identified following the 'grid procedure' described in the work of Luis and Miranda (2008). The grid itself, which was initially a locally improved version of the Verhoef et al. (1996) compilation, was improved in 2011 (Luis and Miranda, 2011) and further refined with the inclusion of Russian data north of Charlie Gibbs FZ (personal communication, S. Mercuriev). The location and geometry of the Mid-Atlantic Ridge is now very well constrained by both magnetic anomalies and swath bathymetry data down to ~10 degrees N. We identified an extensive set of chrons 0, 2A, 3, 3A, 4, 4A, 5, 6, 6C, 11-12, 13, 18, 20, 21, 22, 23, 24, 25, 26, 28, 29, 30, 32, 33r, M0, M2, M4, M10, M16, M21 and M25. The ages at each grid node are computed by linear interpolation of adjacent isochrons along the direction of the flow-lines. As a pre-processing step each conjugate pair of isochrones was simplified by rotating one of them about the finite pole of that anomaly and use both, original picks plus rotated ones, to calculate an average segment. Fractures zones are used to constrain the chron's shape. These procedures minimize the uncertainties in locations where on one side of the basin one has good identifications but the other is poorly defined as is typical of many of the old isochrones. Care has also taken to account for locations where significant ridge jumps were found. Ages of the ocean floor between the oldest identified magnetic anomalies and continental crust are interpolated using the oldest ages of the Muller at al. (2008), which were themselves estimated from the ages of passive continental margin segments. This is a contribution to MAREKH project (PTDC/MAR/108142/2008) funded by the Portuguese Science Foundation.

Historical Development of Origins Research

PubMed Central

Lazcano, Antonio

2010-01-01

Following the publication of the Origin of Species in 1859, many naturalists adopted the idea that living organisms were the historical outcome of gradual transformation of lifeless matter. These views soon merged with the developments of biochemistry and cell biology and led to proposals in which the origin of protoplasm was equated with the origin of life. The heterotrophic origin of life proposed by Oparin and Haldane in the 1920s was part of this tradition, which Oparin enriched by transforming the discussion of the emergence of the first cells into a workable multidisciplinary research program. On the other hand, the scientific trend toward understanding biological phenomena at the molecular level led authors like Troland, Muller, and others to propose that single molecules or viruses represented primordial living systems. The contrast between these opposing views on the origin of life represents not only contrasting views of the nature of life itself, but also major ideological discussions that reached a surprising intensity in the years following Stanley Miller’s seminal result which showed the ease with which organic compounds of biochemical significance could be synthesized under putative primitive conditions. In fact, during the years following the Miller experiment, attempts to understand the origin of life were strongly influenced by research on DNA replication and protein biosynthesis, and, in socio-political terms, by the atmosphere created by Cold War tensions. The catalytic versatility of RNA molecules clearly merits a critical reappraisal of Muller’s viewpoint. However, the discovery of ribozymes does not imply that autocatalytic nucleic acid molecules ready to be used as primordial genes were floating in the primitive oceans, or that the RNA world emerged completely assembled from simple precursors present in the prebiotic soup. The evidence supporting the presence of a wide range of organic molecules on the primitive Earth, including membrane-forming compounds, suggests that the evolution of membrane-bounded molecular systems preceded cellular life on our planet, and that life is the evolutionary outcome of a process, not of a single, fortuitous event. PMID:20534710

Encyclopédie scientifique de l'universe: les étoiles - le système solaire.

NASA Astrophysics Data System (ADS)

This book is a revised, extended and updated edition of the volume published in 1979 (27.003.156).Contents: Première partie - le système solaire: 1. Astronomie des positions (J. Lévy). 2. Le système des constantes astronomiques; les données fondamentales (A. Bec-Borsenberger, F. Chollet). 3. Mécanique du système solaire (B. Morando). 4. Relief et structure des planètes telluriques et des satellites (A. Cazenave, P. Masson, P. Thomas). 5. Physique des atmosphères planétaires denses (D. Gautier, M. Combes,G. Moreels, J. P. Parisot, O. Tallagrand). 6. Les anneaux entourant les planètes (N. Borderies, A. Dollfus). 7. Les comètes et les météorites (A. Levasseur-Regourd). 8. L'environnement du Soleil et de la Terre (J.-L. Steinberg, J.-P. Bibring, A. Boischot, P. Couturier, R. Dumont, T. Encrenaz, P. Lamy).Deuxième partie - le Soleil et les bases de la physique stellaire: 9. Théorie des atmosphères du Soleil et des étoiles (R. Michard). 10. Physique de l'atmosphère solaire {non perturbée} (P. Mein). 11. Les centres actifs (J.-C. Hénoux, J.-C. Vial). 12. Éruptions solaires et phénomènes transitoires (J.-C. Hénoux, M. Pick, G. Trottet). 13. Le cycle solaire (J. Latour, P. Simon).Troisième partie - physique des étoiles: 14. Acquisition des données fondamentales (F. Spite). 15. Les étoiles doubles (R. Bouigue, P. Muller). 16. Les étoiles variables (M. Auvergne, A. Baglin, D. Ducatel, J.-M. Le Contel, J. C. Valtier). 17. Structure interne et évolution des étoiles (J.-P. Zahn). 18. Les familles physiques d'étoiles (G. Cayrel).

Extended-spectrum beta-lactamase- and carbapenemase-producing Enterobacteriaceae among Ethiopian children

PubMed Central

Legese, Melese Hailu; Weldearegay, Gebru Mulugeta; Asrat, Daniel

2017-01-01

Background Infections by extended-spectrum beta-lactamase- (ESBL) and carbapenem-resistant Enterobacteriaceae (CRE) are an emerging problem in children nowadays. Hence, the aim of this study was to determine the prevalence of ESBL- and carbapenemase-producing Enterobacteriaceae among children suspected of septicemia and urinary tract infections (UTIs). Methods A cross-sectional study was conducted from January to March 2014. A total of 322 study participants suspected of septicemia and UTIs were recruited. All blood and urine samples were cultured on blood and MacConkey agar. All positive cultures were characterized by colony morphology, Gram stain, and standard biochemical tests. Antimicrobial susceptibility test was performed on Muller-Hinton agar using disk diffusion. ESBL was detected using combination disk and double-disk synergy methods, and the results were compared. Carbapenemase was detected by modified Hodge method using meropenem. Data were analyzed using SPSS version 20. Results The overall prevalence of ESBL- and carbapenemase-producing Enterobacteriaceae was 78.57% (n=22/28) and 12.12%, respectively. Among the Enterobacteriaceae tested, Klebsiella pneumoniae (84.2%, n=16/19), Escherichia coli (100%, n=5/5), and Klebsiella oxytoca (100%, n=1/1) were positive for ESBL. Double-disk synergy method showed 90.9% sensitivity, 66.7% specificity, 95.2% positive predictive value, and 50% negative predictive value. Carbapenemase-producing Enterobacteriaceae were K. pneumoniae (9.09%, n=3/33) and Morganella morganii (3.03%, n=1/33). Conclusion Screening Enterobacteriaceae for ESBL production is essential for better antibiotics selection and preventing its further emergence and spread. In resource-limited settings, double-disk synergy method can be implemented for screening and confirming ESBL production. Moreover, occurrence of CRE in countries where no carbapenems are sold is worrying microbiologists as well as clinicians. Hence, identifying factors that induce carbapenemase production in the absence of carbapenems prescription is essential for control of CRE dissemination within the community. PMID:28182124

Managing the Moon Program: Lessons Learned from Project Apollo

NASA Technical Reports Server (NTRS)

1999-01-01

There have been many detailed historical studies of the process of deciding on and executing the Apollo lunar landing during the 1960s and early 1970s. From the announcement of President John F Kennedy on May 25, 1961, of his decision to land an American on the Moon by the end of the decade, through the first lunar landing on July 20, 1969, on to the last of six successful Moon landings with Apollo 17 in December 1972, NASA carried out Project Apollo with enthusiasm and aplomb. While there have been many studies recounting the history of Apollo, at the time of the 30th anniversary of the first lunar landing by Apollo 11, it seems appropriate to revisit the process of large-scale technological management as it related to the lunar mission. Consequently, the NASA History Office has chosen to publish this monograph containing the recollections of key partcipants in the management process. The collective oral history presented here was recorded in 1989 at the Johnson Space Center's Gilruth Recreation Center in Houston, Texas. It includes the recollections of key participants in Apollo's administration, addressing issues such as communication between field centers, the prioritization of technological goals, and the delegation of responsibility. The following people participated: George E. Muller, Owen W. Morris, Maxime A. Faget, Robert R. Gilruth, Christopher C. Kraft, and Howard W. (Bill) Tindall. The valuable perspectives of these individuals deepen and expand our understanding of this important historical event. This is the 14th in a series of special studies prepared by the NASA History Office. The Monographs in Aerospace History series is designed to provide a wide variety of investigations relative to the history of aeronautics and space. These publications are intended to be tightly focused in terms of subject, relatively short in length, and reproduced in an inexpensive format to allow timely and broad dissemination to researchers in aerospace history.

Post-zygotic sterility and cytonuclear compatibility limits in S. cerevisiae xenomitochondrial cybrids

PubMed Central

Špírek, Mário; Poláková, Silvia; Jatzová, Katarína; Sulo, Pavol

2015-01-01

Nucleo-mitochondrial interactions, particularly those determining the primary divergence of biological species, can be studied by means of xenomitochondrial cybrids, which are cells where the original mitochondria are substituted by their counterparts from related species. Saccharomyces cerevisiae cybrids are prepared simply by the mating of the ρ0 strain with impaired karyogamy and germinating spores from other Saccharomyces species and fall into three categories. Cybrids with compatible mitochondrial DNA (mtDNA) from Saccharomyces paradoxus CBS 432 and Saccharomyces cariocanus CBS 7994 are metabolically and genetically similar to cybrids containing mtDNA from various S. cerevisiae. Cybrids with mtDNA from other S. paradoxus strains, S. cariocanus, Saccharomyces kudriavzevii, and Saccharomyces mikatae require a period of adaptation to establish efficient oxidative phosphorylation. They exhibit a temperature-sensitive phenotype, slower growth rate on a non-fermentable carbon source and a long lag phase after the shift from glucose. Their decreased respiration capacity and reduced cytochrome aa3 content is associated with the inefficient splicing of cox1I3β, the intron found in all Saccharomyces species but not in S. cerevisiae. The splicing defect is compensated in cybrids by nuclear gain-of-function and can be alternatively suppressed by overexpression of MRP13 gene for mitochondrial ribosomal protein or the MRS2, MRS3, and MRS4 genes involved in intron splicing. S. cerevisiae with Saccharomyces bayanus mtDNA is unable to respire and the growth on ethanol–glycerol can be restored only after mating to some mit− strains. The nucleo-mitochondrial compatibility limit of S. cerevisiae and other Saccharomyces was set between S. kudriavzevii and S. bayanus at the divergence from S. cerevisiae about 15 MYA. The MRS1-cox1 S. cerevisiae/S. paradoxus cytonuclear Dobzhansky–Muller pair has a neglible impact on the separation of species since its imperfection is compensated for by gain-of-function mutation. PMID:25628643

Mitotic chromosome condensation in vertebrates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Vagnarelli, Paola, E-mail: P.Vagnarelli@ed.ac.uk

2012-07-15

Work from several laboratories over the past 10-15 years has revealed that, within the interphase nucleus, chromosomes are organized into spatially distinct territories [T. Cremer, C. Cremer, Chromosome territories, nuclear architecture and gene regulation in mammalian cells, Nat. Rev. Genet. 2 (2001) 292-301 and T. Cremer, M. Cremer, S. Dietzel, S. Muller, I. Solovei, S. Fakan, Chromosome territories-a functional nuclear landscape, Curr. Opin. Cell Biol. 18 (2006) 307-316]. The overall compaction level and intranuclear location varies as a function of gene density for both entire chromosomes [J.A. Croft, J.M. Bridger, S. Boyle, P. Perry, P. Teague,W.A. Bickmore, Differences in themore » localization and morphology of chromosomes in the human nucleus, J. Cell Biol. 145 (1999) 1119-1131] and specific chromosomal regions [N.L. Mahy, P.E. Perry, S. Gilchrist, R.A. Baldock, W.A. Bickmore, Spatial organization of active and inactive genes and noncoding DNA within chromosome territories, J. Cell Biol. 157 (2002) 579-589] (Fig. 1A, A'). In prophase, when cyclin B activity reaches a high threshold, chromosome condensation occurs followed by Nuclear Envelope Breakdown (NEB) [1]. At this point vertebrate chromosomes appear as compact structures harboring an attachment point for the spindle microtubules physically recognizable as a primary constriction where the two sister chromatids are held together. The transition from an unshaped interphase chromosome to the highly structured mitotic chromosome (compare Figs. 1A and B) has fascinated researchers for several decades now; however a definite picture of how this process is achieved and regulated is not yet in our hands and it will require more investigation to comprehend the complete process. From a biochemical point of view a vertebrate mitotic chromosomes is composed of DNA, histone proteins (60%) and non-histone proteins (40%) [6]. I will discuss below what is known to date on the contribution of these two different classes of proteins and their co-operation in establishing the final mitotic chromosome structure.« less

Estuarine biodiversity as an indicator of groundwater discharge

NASA Astrophysics Data System (ADS)

Silva, A. C. F.; Tavares, P.; Shapouri, M.; Stigter, T. Y.; Monteiro, J. P.; Machado, M.; Cancela da Fonseca, L.; Ribeiro, L.

2012-01-01

Communities located in the interface between marine/brackish and freshwater habitats are likely to be early responders to climatic changes as they are exposed to both saline and freshwater conditions, and thus are expected to be sensitive to any change in their environmental conditions. Climatic effects are predicted to reduce the availability of groundwater, altering the hydrological balance on estuarine-aquifer interfaces. Here, we aimed to characterise the estuarine faunal community along a gradient dependent on groundwater input, under a predicted climatic scenario of reduction in groundwater discharge into the estuary. Sediment macrofauna was sampled along a salinity gradient following both the wet and dry seasons in 2009. Results indicated that species abundance varied significantly with the salinity gradient created by the groundwater discharge into the estuarine habitat and with sampling time. The isopode Cyathura carinata (Krøyer, 1847) and the polychaetes Heteromastus filiformis (Claparède, 1864) and Hediste diversicolor O.F. Muller, 1776 were associated with the more saline locations, while oligochaeta and Spionidae were more abundant in areas of lower salinity. The polychaete Alkmaria romijni Horst, 1919 was the dominant species and ubiquitous throughout sampling stations. This study provides evidence for estuarine fauna to be considered as a potentially valuable indicator of variation in the input of groundwater into marine-freshwater interface habitats, expected from climatic pressures on aquifer levels, condition and recharge rates. For instance, a reduction in the abundance of some polychaete species, found here to be more abundant in freshwater conditions, and increasing Oligochaeta found here on higher salinities, can potentially be early warnings of a reduction in the input of groundwater into estuaries. Estuarine benthic species are often the main prey for commercially important fish predators such as in our case study, making it important to monitor the aquatic habitat interfaces taking into consideration the estuarine macrobenthos and groundwater availability in the system.

Variation of Arctic's Sea-ice Albedo between 2000 and 2016 by fusion of MISR and MODIS data

NASA Astrophysics Data System (ADS)

Muller, Jan-Peter; Kharbouche, Said

2017-04-01

Many research studies have demonstrated that sea-ice plays a key role in climate change and global warming. Most of these studies are based either on ground in-situ data or on remotely sensed data. The latter data are provided mainly by active (SAR and LiDAR) sensors such as Cryosat2, ERS1/2, ENVISAT, Radarsat1/2, ICESat as well as passive sensors such as SSM/I. Nevertheless, the contribution of such active optical sensors data is limited to parameters such as thickness and sea-ice concentration from which albedo may be inferred. The creation of high quality albedo for sea-ice using optical satellites is confronted with two main obstacles: 1) the Arctic is a very cloudy region and, high quality albedo requires multi-angle observations over a relatively short period; 2) cloud masking over sea-ice is a very difficult task, especially for sensor with low spectral resolution. To overcome the above two obstacles, we discuss in a separate report the generation of this fused daily, weekly, fortnightly and monthly product at 1km and 5km resolution on a polar stereographic grid [1]. The limited swath (380km) of MISR means that not all of the Arctic is covered on a daily basis so composites on different time-steps were produced. The results show that sea-ice albedo has been in continuous decline since 2000 with thinner sea-ice and greater leads and open water as well as more ponding at earlier times in the year. The implications of these results are discussed in terms of the sea-ice climate feedback. Animated visualisations of the albedo patterns each year, the decline in average and the increase in standard deviation in albedo for every single day for all 17 years will be shown to demonstrate the effects of climate change over sea-ice albedo. References [1] Kharbouche & Muller, Production of Arctic sea-ice albedo by fusion of MISR and MODIS data. This conference. Acknowledgements This work was supported by www.QA4ECV.eu, a project of European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement no. 607405.

A Peep into the Uncertainty-Complexity-Relevance Modeling Trilemma through Global Sensitivity and Uncertainty Analysis

NASA Astrophysics Data System (ADS)

Munoz-Carpena, R.; Muller, S. J.; Chu, M.; Kiker, G. A.; Perz, S. G.

2014-12-01

Model Model complexity resulting from the need to integrate environmental system components cannot be understated. In particular, additional emphasis is urgently needed on rational approaches to guide decision making through uncertainties surrounding the integrated system across decision-relevant scales. However, in spite of the difficulties that the consideration of modeling uncertainty represent for the decision process, it should not be avoided or the value and science behind the models will be undermined. These two issues; i.e., the need for coupled models that can answer the pertinent questions and the need for models that do so with sufficient certainty, are the key indicators of a model's relevance. Model relevance is inextricably linked with model complexity. Although model complexity has advanced greatly in recent years there has been little work to rigorously characterize the threshold of relevance in integrated and complex models. Formally assessing the relevance of the model in the face of increasing complexity would be valuable because there is growing unease among developers and users of complex models about the cumulative effects of various sources of uncertainty on model outputs. In particular, this issue has prompted doubt over whether the considerable effort going into further elaborating complex models will in fact yield the expected payback. New approaches have been proposed recently to evaluate the uncertainty-complexity-relevance modeling trilemma (Muller, Muñoz-Carpena and Kiker, 2011) by incorporating state-of-the-art global sensitivity and uncertainty analysis (GSA/UA) in every step of the model development so as to quantify not only the uncertainty introduced by the addition of new environmental components, but the effect that these new components have over existing components (interactions, non-linear responses). Outputs from the analysis can also be used to quantify system resilience (stability, alternative states, thresholds or tipping points) in the face of environmental and anthropogenic change (Perz, Muñoz-Carpena, Kiker and Holt, 2013), and through MonteCarlo mapping potential management activities over the most important factors or processes to influence the system towards behavioral (desirable) outcomes (Chu-Agor, Muñoz-Carpena et al., 2012).

Interallelic and Intergenic Incompatibilities of the Prdm9 (Hst1) Gene in Mouse Hybrid Sterility

PubMed Central

Flachs, Petr; Mihola, Ondřej; Šimeček, Petr; Gregorová, Soňa; Schimenti, John C.; Matsui, Yasuhisa; Baudat, Frédéric; de Massy, Bernard; Piálek, Jaroslav; Forejt, Jiří; Trachtulec, Zdenek

2012-01-01

The Dobzhansky-Muller model of incompatibilities explains reproductive isolation between species by incorrect epistatic interactions. Although the mechanisms of speciation are of great interest, no incompatibility has been characterized at the gene level in mammals. The Hybrid sterility 1 gene (Hst1) participates in the arrest of meiosis in F1 males of certain strains from two Mus musculus subspecies, e.g., PWD from M. m. musculus and C57BL/6J (henceforth B6) from M. m. domesticus. Hst1 has been identified as a meiotic PR-domain gene (Prdm9) encoding histone 3 methyltransferase in the male offspring of PWD females and B6 males, (PWD×B6)F1. To characterize the incompatibilities underlying hybrid sterility, we phenotyped reproductive and meiotic markers in males with altered copy numbers of Prdm9. A partial rescue of fertility was observed upon removal of the B6 allele of Prdm9 from the azoospermic (PWD×B6)F1 hybrids, whereas removing one of the two Prdm9 copies in PWD or B6 background had no effect on male reproduction. Incompatibility(ies) not involving Prdm9B6 also acts in the (PWD×B6)F1 hybrids, since the correction of hybrid sterility by Prdm9B6 deletion was not complete. Additions and subtractions of Prdm9 copies, as well as allelic replacements, improved meiotic progression and fecundity also in the progeny-producing reciprocal (B6×PWD)F1 males. Moreover, an increased dosage of Prdm9 and reciprocal cross enhanced fertility of other sperm-carrying male hybrids, (PWD×B6-C3H.Prdm9)F1, harboring another Prdm9 allele of M. m. domesticus origin. The levels of Prdm9 mRNA isoforms were similar in the prepubertal testes of all types of F1 hybrids of PWD with B6 and B6-C3H.Prdm9 despite their different prospective fertility, but decreased to 53% after removal of Prdm9B6. Therefore, the Prdm9B6 allele probably takes part in posttranscriptional dominant-negative hybrid interaction(s) absent in the parental strains. PMID:23133405

A X-Ray Absorption Study of Transition Metal Oxides

NASA Astrophysics Data System (ADS)

Bunker, Grant Byrd

This work is an experimental and theoretical study of the x-ray absorption near-edge structure of selected 3d transition metal compounds. The goal is to understand the physical mechanisms of XANES, using the competing multiple scattering (MS) and single scattering formalisms of Durham et al, and of Muller and Schaich, respectively. Careful experimental measurements of the K edge absorption of Mn oxides and KMnO(,4) at 300(DEGREES)K, 140(DEGREES)K and 80(DEGREES)K were made. These materials were chosen because they exhibit a variety of structures and oxidation states. Computer simulations of the XANES using the formalisms above were also performed. The experimental results show that atoms beyond the first coordination shell significantly affect the XANES near and above the edge; in particular the temperature dependent XANES and the "white line" in MnO establish this. We conclude that XANES, like EXAFS, is primarily sensitive to geometrical structure, except within about 1 Rydberg of the Fermi level. Two types of MS are distinguished: type 1 (forward scattering) is important in both XANES and EXAFS regions; type 2 (large angle scattering) is important only at and below the edge. MS of the photoelectron among the first shell Oxygen atoms in KMnO(,4) is observed experimentally, and found to become negligible above (DBLTURN) 1 Rydberg past the edge. The sharp features in XANES are primarily due to scattering from distant atoms, rather than localized states, except below the edge. This is supported by the observation that (alpha)-Mn(,2)O(,3) and Mn(,3)O(,4) spectra are nearly identical; their structures are the same, but the average oxidation states are different. We find the bond length strongly affects the edge position and the intensity of the 3d absorption in tetrahedrally coordinated transition metals. Other new results are the first shell EXAFS amplitude in MnO shows an anomalous energy dependence, which apparently cannot be explained by current theory. A new deconvolution algorithm is proposed to minimize truncation effects in Fourier filtering.

Vancomycin tolerance in enterococci.

PubMed

Saribas, Suat; Bagdatli, Yasar

2004-11-01

Tolerance can be defined as the ability of bacteria to grow in the presence of high concentrations of bactericide antimicrobics, so that the killing action of the drug is avoided but the minimal inhibitory concentration (MIC) remains the same. We investigated vancomycin tolerance in the Enterococcus faecium and Enterococcus faecalis strains isolated from different clinical specimens. Vancomycin was obtained from Sigma Chemical Co. We studied 100 enterococci strains. Fifty-six and 44 of Enterococcus strains were idendified as E. feacalis and E. faecium, respectively. To determine MICs and minimal bactericidal concentration (MBC), we inoculated strains from an overnight agar culture to Muller-Hinton broth and incubated them for 4-6 h at 37 degrees C with shaking to obtain a logarithmic phase culture. The inoculum was controlled by performing a colony count for each test. We determined MBC values and MBC/MIC ratios to study tolerance to vancomycin. Vancomycin tolerance was defined as a high MBC value and an MBC/MIC ratio > or =32. Fifty-six and 44 of the Enterococcus strains were identified as E. faecium and E. faecalis, respectively. Thirty-one E. faecium and 48 E. faecalis were found to be susceptible to vancomycin and these susceptible strains were included in this study. The MICs of susceptible strains ranged from < or =1 to 4 mg/l, the MBCs were > or =512 mg/l. Tolerance was detected in all E. faecalis and E. faecium strains. The standard E. faecalis 21913 strain also exhibited tolerance according to the high MBC value and the MBC/MIC ratio. We defined the tolerant strains as having no bactericidal effect and MBC/MIC > or =32. We found that a 100% tolerance was present in susceptible strains. One of the hypotheses for tolerance is that tolerant cells fail to mobilize or create the autolysins needed for enlargement and division. Our data suggests that tolerance may compromise glycopeptide therapy of serious enterococci infections. To add an aminoglycoside to the glycopeptide therapy unless MBCs are unavailable can be useful in the effective treatment of serious Enterococcus infections.

VizieR Online Data Catalog: FARGO_THORIN 1.0 hydrodynamic code (Chrenko+, 2017)

NASA Astrophysics Data System (ADS)

Chrenko, O.; Broz, M.; Lambrechts, M.

2017-07-01

This archive contains the source files, documentation and example simulation setups of the FARGO_THORIN 1.0 hydrodynamic code. The program was introduced, described and used for simulations in the paper. It is built on top of the FARGO code (Masset, 2000A&AS..141..165M, Baruteau & Masset, 2008ApJ...672.1054B) and it is also interfaced with the REBOUND integrator package (Rein & Liu, 2012A&A...537A.128R). THORIN stands for Two-fluid HydrOdynamics, the Rebound integrator Interface and Non-isothermal gas physics. The program is designed for self-consistent investigations of protoplanetary systems consisting of a gas disk, a disk of small solid particles (pebbles) and embedded protoplanets. Code features: I) Non-isothermal gas disk with implicit numerical solution of the energy equation. The implemented energy source terms are: Compressional heating, viscous heating, stellar irradiation, vertical escape of radiation, radiative diffusion in the midplane and radiative feedback to accretion heating of protoplanets. II) Planets evolved in 3D, with close encounters allowed. The orbits are integrated using the IAS15 integrator (Rein & Spiegel, 2015MNRAS.446.1424R). The code detects the collisions among planets and resolve them as mergers. III) Refined treatment of the planet-disk gravitational interaction. The code uses a vertical averaging of the gravitational potential, as outlined in Muller & Kley (2012A&A...539A..18M). IV) Pebble disk represented by an Eulerian, presureless and inviscid fluid. The pebble dynamics is affected by the Epstein gas drag and optionally by the diffusive effects. We also implemented the drag back-reaction term into the Navier-Stokes equation for the gas. Archive summary: ------------------------------------------------------------------------- directory/file Explanation ------------------------------------------------------------------------- /in_relax Contains setup of the first example simulation /in_wplanet Contains setup of the second example simulation /srcmain Contains the source files of FARGOTHORIN /src_reb Contains the source files of the REBOUND integrator package to be linked with THORIN GUNGPL3 GNU General Public License, version 3 LICENSE License agreement README Simple user's guide UserGuide.pdf Extended user's guide refman.pdf Programer's guide ----------------------------------------------------------------------------- (1 data file).

Multivariate singular spectrum analysis and the road to phase synchronization

NASA Astrophysics Data System (ADS)

Groth, Andreas; Ghil, Michael

2010-05-01

Singular spectrum analysis (SSA) and multivariate SSA (M-SSA) are based on the classical work of Kosambi (1943), Loeve (1945) and Karhunen (1946) and are closely related to principal component analysis. They have been introduced into information theory by Bertero, Pike and co-workers (1982, 1984) and into dynamical systems analysis by Broomhead and King (1986a,b). Ghil, Vautard and associates have applied SSA and M-SSA to the temporal and spatio-temporal analysis of short and noisy time series in climate dynamics and other fields in the geosciences since the late 1980s. M-SSA provides insight into the unknown or partially known dynamics of the underlying system by decomposing the delay-coordinate phase space of a given multivariate time series into a set of data-adaptive orthonormal components. These components can be classified essentially into trends, oscillatory patterns and noise, and allow one to reconstruct a robust "skeleton" of the dynamical system's structure. For an overview we refer to Ghil et al. (Rev. Geophys., 2002). In this talk, we present M-SSA in the context of synchronization analysis and illustrate its ability to unveil information about the mechanisms behind the adjustment of rhythms in coupled dynamical systems. The focus of the talk is on the special case of phase synchronization between coupled chaotic oscillators (Rosenblum et al., PRL, 1996). Several ways of measuring phase synchronization are in use, and the robust definition of a reasonable phase for each oscillator is critical in each of them. We illustrate here the advantages of M-SSA in the automatic identification of oscillatory modes and in drawing conclusions about the transition to phase synchronization. Without using any a priori definition of a suitable phase, we show that M-SSA is able to detect phase synchronization in a chain of coupled chaotic oscillators (Osipov et al., PRE, 1996). Recently, Muller et al. (PRE, 2005) and Allefeld et al. (Intl. J. Bif. Chaos, 2007) have demonstrated the usefulness of principal component analysis in detecting phase synchronization from multivariate time series. The present talk provides a generalization of this idea and presents a robust implementation thereof via M-SSA.

Considerations on photochemical genotoxicity. II: report of the 2009 International Workshop on Genotoxicity Testing Working Group.

PubMed

Lynch, Anthony M; Guzzie, Peggy J; Bauer, Daniel; Gocke, Elmar; Itoh, Satoru; Jacobs, Abby; Krul, Cyrille A M; Schepky, Andreas; Tanaka, Noriho; Kasper, Peter

2011-08-16

A workshop to reappraise the previous IWGT recommendations for photogenotoxicity testing [E. Gocke, L. Muller, P.J. Guzzie, S. Brendler-Schwaab, S. Bulera, C.F. Chignell, L.M. Henderson, A. Jacobs, H. Murli, R.D. Snyder, N. Tanaka, Considerations on photochemical genotoxicity: report of the International Workshop on Genotoxicity Test Procedures working group, Environ. Mol. Mutagen., 35 (2000) 173-184] was recently held as part of the 5th International Workshop on Genotoxicity Testing (IWGT) meeting in Basel, Switzerland (August 17-19, 2009). An Expert Panel was convened from regulatory, academic and industrial scientists (with several members serving on the original panel) and chaired by Dr Peter Kasper (BfArM, Germany). The aim of the workshop was to review progress made in photo(geno)toxicity testing over the past decade; a period which saw the introduction of several regulatory photosafety guidances in particular in Europe and the USA. Based on current regulatory guidelines a substantial proportion of compounds trigger the requirements for photosafety testing. Moreover, there has been growing concern within industry about the performance of the in vitro photosafety tests in the "real world" of compound development. Therefore, the expert group reviewed the status of the current regulatory guidance's and the impact these have had on compound development in the context of the various triggers for photosafety testing. In addition, the performance of photogenotoxicity assays (old and new) was discussed, particularly in view of reports of pseudophotoclastogencity. The Expert Panel finished with an assessment of the positioning of photogenotoxicity testing within a photosafety testing strategy. The most significant conclusion made by the Expert Panel was that photogenotoxicity testing should no longer be recommended as part of the standard photosafety testing strategy. In addition, progress was made on the refinement of triggers for photosafety testing. For example, there was support for harmonisation of methods to determine the Molar Extinction Coefficient (MEC) and a consensus agreement that there should be no requirement for testing of compounds with a MEC<1000Lmol(-1)cm(-1). Copyright © 2011 Elsevier B.V. All rights reserved.

Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility.

PubMed

Flachs, Petr; Mihola, Ondřej; Simeček, Petr; Gregorová, Soňa; Schimenti, John C; Matsui, Yasuhisa; Baudat, Frédéric; de Massy, Bernard; Piálek, Jaroslav; Forejt, Jiří; Trachtulec, Zdenek

2012-01-01

The Dobzhansky-Muller model of incompatibilities explains reproductive isolation between species by incorrect epistatic interactions. Although the mechanisms of speciation are of great interest, no incompatibility has been characterized at the gene level in mammals. The Hybrid sterility 1 gene (Hst1) participates in the arrest of meiosis in F(1) males of certain strains from two Mus musculus subspecies, e.g., PWD from M. m. musculus and C57BL/6J (henceforth B6) from M. m. domesticus. Hst1 has been identified as a meiotic PR-domain gene (Prdm9) encoding histone 3 methyltransferase in the male offspring of PWD females and B6 males, (PWD×B6)F(1). To characterize the incompatibilities underlying hybrid sterility, we phenotyped reproductive and meiotic markers in males with altered copy numbers of Prdm9. A partial rescue of fertility was observed upon removal of the B6 allele of Prdm9 from the azoospermic (PWD×B6)F(1) hybrids, whereas removing one of the two Prdm9 copies in PWD or B6 background had no effect on male reproduction. Incompatibility(ies) not involving Prdm9(B6) also acts in the (PWD×B6)F(1) hybrids, since the correction of hybrid sterility by Prdm9(B6) deletion was not complete. Additions and subtractions of Prdm9 copies, as well as allelic replacements, improved meiotic progression and fecundity also in the progeny-producing reciprocal (B6×PWD)F(1) males. Moreover, an increased dosage of Prdm9 and reciprocal cross enhanced fertility of other sperm-carrying male hybrids, (PWD×B6-C3H.Prdm9)F(1), harboring another Prdm9 allele of M. m. domesticus origin. The levels of Prdm9 mRNA isoforms were similar in the prepubertal testes of all types of F(1) hybrids of PWD with B6 and B6-C3H.Prdm9 despite their different prospective fertility, but decreased to 53% after removal of Prdm9(B6). Therefore, the Prdm9(B6) allele probably takes part in posttranscriptional dominant-negative hybrid interaction(s) absent in the parental strains.

Automated science target selection for future Mars rovers: A machine vision approach for the future ESA ExoMars 2018 rover mission

NASA Astrophysics Data System (ADS)

Tao, Yu; Muller, Jan-Peter

2013-04-01

The ESA ExoMars 2018 rover is planned to perform autonomous science target selection (ASTS) using the approaches described in [1]. However, the approaches shown to date have focused on coarse features rather than the identification of specific geomorphological units. These higher-level "geoobjects" can later be employed to perform intelligent reasoning or machine learning. In this work, we show the next stage in the ASTS through examples displaying the identification of bedding planes (not just linear features in rock-face images) and the identification and discrimination of rocks in a rock-strewn landscape (not just rocks). We initially detect the layers and rocks in 2D processing via morphological gradient detection [1] and graph cuts based segmentation [2] respectively. To take this further requires the retrieval of 3D point clouds and the combined processing of point clouds and images for reasoning about the scene. An example is the differentiation of rocks in rover images. This will depend on knowledge of range and range-order of features. We show demonstrations of these "geo-objects" using MER and MSL (released through the PDS) as well as data collected within the EU-PRoViScout project (http://proviscout.eu). An initial assessment will be performed of the automated "geo-objects" using the OpenSource StereoViewer developed within the EU-PRoViSG project (http://provisg.eu) which is released in sourceforge. In future, additional 3D measurement tools will be developed within the EU-FP7 PRoViDE2 project, which started on 1.1.13. References: [1] M. Woods, A. Shaw, D. Barnes, D. Price, D. Long, D. Pullan, (2009) "Autonomous Science for an ExoMars Rover-Like Mission", Journal of Field Robotics Special Issue: Special Issue on Space Robotics, Part II, Volume 26, Issue 4, pages 358-390. [2] J. Shi, J. Malik, (2000) "Normalized Cuts and Image Segmentation", IEEE Transactions on Pattern Analysis and Machine Intelligence, Volume 22. [3] D. Shin, and J.-P. Muller (2009), Stereo workstation for Mars rover image analysis, in EPSC (Europlanets), Potsdam, Germany, EPSC2009-390

Divergent adaptation promotes reproductive isolation among experimental populations of the filamentous fungus Neurospora

PubMed Central

2008-01-01

Background An open, focal issue in evolutionary biology is how reproductive isolation and speciation are initiated; elucidation of mechanisms with empirical evidence has lagged behind theory. Under ecological speciation, reproductive isolation between populations is predicted to evolve incidentally as a by-product of adaptation to divergent environments. The increased genetic diversity associated with interspecific hybridization has also been theorized to promote the development of reproductive isolation among independent populations. Using the fungal model Neurospora, we founded experimental lineages from both intra- and interspecific crosses, and evolved them in one of two sub-optimal, selective environments. We then measured the influence that initial genetic diversity and the direction of selection (parallel versus divergent) had on the evolution of reproductive isolation. Results When assayed in the selective environment in which they were evolved, lineages typically had greater asexual fitness than the progenitors and the lineages that were evolved in the alternate, selective environment. Assays for reproductive isolation showed that matings between lineages that were adapted to the same environment had greater sexual reproductive success than matings between lineages that were adapted to different environments. Evidence of this differential reproductive success was observed at two stages of the sexual cycle. For one of the two observed incompatibility phenotypes, results from genetic analyses were consistent with a two-locus, two-allele model with asymmetric (gender-specific), antagonistic epistasis. The effects of divergent adaptation on reproductive isolation were more pronounced for populations with greater initial genetic variation. Conclusion Divergent selection resulted in divergent adaptation and environmental specialization, consistent with fixation of different alleles in different environments. When brought together by mating, these alleles interacted negatively and had detrimental effects on sexual reproductive success, in agreement with the Dobzhansky-Muller model of genetic incompatibilities. As predicted by ecological speciation, greater reproductive isolation was observed among divergent-adapted lineages than among parallel-adapted lineages. These results support that, given adequate standing genetic variation, divergent adaptation can indirectly cause the evolution of reproductive isolation, and eventually lead to speciation. PMID:18237415

Modeling Convective Injection of Water Vapor into the Lower Stratosphere in the Mid-Latitudes over North America

NASA Astrophysics Data System (ADS)

Clapp, C.; Leroy, S. S.; Anderson, J. G.

2015-12-01

Water vapor in the upper troposphere and lower stratosphere (UTLS) from the tropics to the poles is important both radiatively and chemically. Water vapor is the most important greenhouse gas, and increases in water vapor concentrations in the UTLS lead to cooling at these levels and induce warming at the surface [Forster and Shine, 1999; 2002;Solomon et al., 2010]. Water vapor is also integral to stratospheric chemistry. It is the dominant source of OH in the lower stratosphere [ Hanisco et al. , 2001], and increases in water vapor concentrations promote stratospheric ozone loss by raising the reactivity of several key heterogeneous reactions as well as by promoting the growth of reactive surface area [Anderson et al., 2012; Carslaw et al., 1995; Carslaw et al., 1997; Drdla and Muller , 2012; Kirk-Davidoff et al., 1999; Shi et al., 2001]. However, the processes that control the distribution and phase of water in this region of the atmosphere are not well understood. This is especially true at mid-latitudes where several different dynamical mechanisms are capable of influencing UTLS water vapor concentrations. The contribution by deep convective storm systems that penetrate into the lower stratosphere is the least well understood and the least well represented in global models because of the small spatial scales and short time scales over which convection occurs. To address this issue, we have begun a modeling study to investigate the convective injection of water vapor from the troposphere into the stratosphere in the mid-latitudes. Fine-scale models have been previously used to simulate convection from the troposphere to the stratosphere [e.g., Homeyer et al., 2014]. Here we employ the Advanced Research Weather and Research Forecasting model (ARW) at 3-km resolution to resolve convection over the eastern United States during August of 2007 and August of 2013. We conduct a comparison of MERRA, the reanalysis used to initialize ARW, and the model output to assess the dependence of ARW on boundary conditions and its independence as a climate model. We also observe structured trapped gravity wave phenomena near the tropopause.

Modeling Convection of Water Vapor into the Mid-latitude Summer Stratosphere

NASA Astrophysics Data System (ADS)

Clapp, C.; Leroy, S. S.; Anderson, J. G.

2016-12-01

Water vapor in the upper troposphere and lower stratosphere (UTLS) from the tropics to the poles is important both radiatively and chemically. Water vapor is the most important greenhouse gas, and increases in water vapor concentrations in the UTLS lead to cooling at these levels and induce warming at the surface [Forster and Shine, 1999; 2002; Solomon et al., 2010]. Water vapor is also integral to stratospheric chemistry. It is the dominant source of OH in the lower stratosphere [Hanisco et al., 2001], and increases in water vapor concentrations promote stratospheric ozone loss by raising the reactivity of several key heterogeneous reactions as well as by promoting the growth of reactive surface area [Anderson et al., 2012; Carslaw et al., 1995; Carslaw et al., 1997; Drdla and Muller , 2012; Kirk-Davidoff et al., 1999; Shi et al., 2001]. However, the processes that control the distribution and phase of water in this region of the atmosphere are not well understood. This is especially true at mid-latitudes where several different dynamical mechanisms are capable of influencing UTLS water vapor concentrations. The contribution by deep convective storm systems that penetrate into the lower stratosphere is the least well understood and the least well represented in global models because of the small spatial scales and short time scales over which convection occurs. To address this issue, we have begun a modeling study to investigate the convective injection of water vapor from the troposphere into the stratosphere in the mid-latitudes. Fine-scale models have been previously used to simulate convection from the troposphere to the stratosphere [e.g., Homeyer et al., 2014]. Here we employ the Advanced Research Weather and Research Forecasting model (ARW) at 3-km resolution to resolve convection over the mid-western United States during August of 2013 including a storm system observed by SEAC4RS. We assess the transport of water vapor into the stratosphere over the model run and specifically from deep convection. We also analyze the distribution of water vapor within the stratosphere after convective events in comparison to flight observations.

Middle East emissions of VOCs estimated using OMI HCHO observations and the MAGRITTE regional model

NASA Astrophysics Data System (ADS)

Müller, Jean-Francois; Stavrakou, Trisevgeni; Bauwens, Maite; De Smedt, Isabelle; Van Roozendael, Michel

2017-04-01

Air quality in the Middle East has considerably deteriorated in the last decades. In particular tropospheric ozone reaches very high levels during summer due to the combination of high solar irradiances with often very high and rapidly evolving anthropogenic emissions of NOx and VOCs associated to oil/gas exploitation and fast urbanisation. In addition, high biogenic VOC emissions are expected in non-desert areas, in particular during summer due to scorching temperatures and high solar irradiances. Both anthropogenic and biogenic VOC emissions are poorly known, however, due to near-absence of experimental constraints on emission factors for local vegetation and industrial and extraction processes. Furthermore, the dependence of emissions on environmental conditions (e.g. soil moisture in the case of biogenic isoprene emissions) is only very crudely parameterized in emission models. Here we use spaceborne (OMI) observations of formaldehyde, a known product of anthropogenic and biogenic VOC oxidation, as constraint in an inversion framework built on a regional model, MAGRITTE (Model of Atmospheric composition at Global and Regional scales using Inversion Techniques for Trace Gas Emissions). MAGRITTE is run at 0.5x0.5 degree resolution, with lateral boundary conditions provided by the global CTM IMAGESv2 (Bauwens et al., 2016). The global and regional models share essentially the same chemistry and physical parameterizations. Emission inversion with MAGRITTE is performed using an adjoint-based iterative procedure, similar to previous inversions using IMAGES. Biogenic VOC emissions are calculated using MEGAN (Muller et al., 2008; Stavrakou et al., 2015), whereas the HTAPv2 emission dataset is used for anthropogenic emissions, with several adjustments for oil/gas exploitation and traffic emissions. The OMI data are regridded onto the model resolution and averaged seasonally in order to reduce noise. Preliminary results indicate that biogenic isoprene emissions are a major VOC source in summertime throughout the "Fertile Crescent" from the Nile Valley to Iraq. Anthropogenic emissions from many large cities (e.g. Bagdad and Cairo) as well as from known oil extraction/refining/handling sites are well detected, while other cities (such as Riyadh) are elusive.

Video change detection for fixed wing UAVs

NASA Astrophysics Data System (ADS)

Bartelsen, Jan; Müller, Thomas; Ring, Jochen; Mück, Klaus; Brüstle, Stefan; Erdnüß, Bastian; Lutz, Bastian; Herbst, Theresa

2017-10-01

In this paper we proceed the work of Bartelsen et al.1 We present the draft of a process chain for an image based change detection which is designed for videos acquired by fixed wing unmanned aerial vehicles (UAVs). From our point of view, automatic video change detection for aerial images can be useful to recognize functional activities which are typically caused by the deployment of improvised explosive devices (IEDs), e.g. excavations, skid marks, footprints, left-behind tooling equipment, and marker stones. Furthermore, in case of natural disasters, like flooding, imminent danger can be recognized quickly. Due to the necessary flight range, we concentrate on fixed wing UAVs. Automatic change detection can be reduced to a comparatively simple photogrammetric problem when the perspective change between the "before" and "after" image sets is kept as small as possible. Therefore, the aerial image acquisition demands a mission planning with a clear purpose including flight path and sensor configuration. While the latter can be enabled simply by a fixed and meaningful adjustment of the camera, ensuring a small perspective change for "before" and "after" videos acquired by fixed wing UAVs is a challenging problem. Concerning this matter, we have performed tests with an advanced commercial off the shelf (COTS) system which comprises a differential GPS and autopilot system estimating the repetition accuracy of its trajectory. Although several similar approaches have been presented,23 as far as we are able to judge, the limits for this important issue are not estimated so far. Furthermore, we design a process chain to enable the practical utilization of video change detection. It consists of a front-end of a database to handle large amounts of video data, an image processing and change detection implementation, and the visualization of the results. We apply our process chain on the real video data acquired by the advanced COTS fixed wing UAV and synthetic data. For the image processing and change detection, we use the approach of Muller.4 Although it was developed for unmanned ground vehicles (UGVs), it enables a near real time video change detection for aerial videos. Concluding, we discuss the demands on sensor systems in the matter of change detection.

Fusion and Visualization of HiRISE Super-Resolution, Shape-from-Shading DTM with MER Stereo 3D Reconstructions

NASA Astrophysics Data System (ADS)

Gupta, S.; Paar, G.; Muller, J. P.; Tao, Y.; Tyler, L.; Traxler, C.; Hesina, G.; Huber, B.; Nauschnegg, B.

2014-12-01

The FP7-SPACE project PRoViDE has assembled a major portion of the imaging data gathered so far from rover vehicles, landers and probes on extra-terrestrial planetary surfaces into a unique database, bringing them into a common planetary geospatial context and providing access to a complete set of 3D vision products. One major aim of PRoViDE is the fusion between orbiter and rover image products. To close the gap between HiRISE imaging resolution (down to 25cm for the OrthoRectified image (ORI), down to 1m for the DTM) and surface vision products, images from multiple HiRISE acquisitions are combined into a super resolution data set (Tao & Muller, 2014), increasing to 5cm resolution the Ortho images. Furthermore, shape-from-shading is applied to one of the ORIs at its original resolution for refinement of the HiRISE DTM, leading to DTM ground resolutions of up to 25 cm. After texture-based co-registration with these refined orbiter 3D products, MER PanCam and NavCam 3D image products can be smoothly pasted into a multi-resolution 3D data representation. Typical results from the MER mission are presented by a dedicated real-time rendering tool which is fed by a hierarchical 3D data structure that is able to cope with all involved scales from global planetary scale down to close-up reconstructions in the mm range. This allows us to explore and analyze the geological characteristics of rock outcrops, for example the detailed geometry and internal features of sedimentary rock layers, to aid paleoenvironmental interpretation. This integrated approach enables more efficient development of geological models of martian rock outcrops. The rendering tool also provides measurement tools to obtain geospatial data of surface points and distances between them. We report on novel scientific use cases and the added value potential of the resultant high-quality data set and presentation means to support further geologic investigations. The research leading to these results has received funding from the EC's 7th Framework Programme (FP7/2007-2013) under grant agreement n° 312377.

Cultivable bacterial diversity along the altitudinal zonation and vegetation range of tropical Eastern Himalaya.

PubMed

Lyngwi, Nathaniel A; Koijam, Khedarani; Sharma, D; Joshi, S R

2013-03-01

The Northeastern part of India sprawls over an area of 262 379km2 in the Eastern Himalayan range. This constitutes a biodiversity hotspot with high levels of biodiversity and endemism; unfortunately, is also a poorly known area, especially on its microbial diversity. In this study, we assessed cultivable soil bacterial diversity and distribution from lowlands to highlands (34 to 3 990m.a.s.l.). Soil physico-chemical parameters and forest types across the different altitudes were characterized and correlated with bacterial distribution and diversity. Microbes from the soil samples were grown in Nutrient, Muller Hinton and Luria-Bertani agar plates and were initially characterized using biochemical methods. Parameters like dehydrogenase and urease activities, temperature, moisture content, pH, carbon content, bulk density of the sampled soil were measured for each site. Representative isolates were also subjected to 16S rDNA sequence analysis. A total of 155 cultivable bacterial isolates were characterized which were analyzed for richness, evenness and diversity indices. The tropical and sub-tropical forests supported higher bacterial diversity compared to temperate pine, temperate conifer, and sub-alpine rhododendron forests. The 16S rRNA phylogenetic analysis revealed that Firmicutes was the most common group followed by Proteobacreria and Bacteroidetes. Species belonging to the genera Bacillus and Pseudomonas were the most abundant. Bacterial CFU showed positive but insignificant correlation with soil parameters like pH (r=0.208), soil temperature (r=0.303), ambient temperature (r=0.443), soil carbon content (r=0.525), soil bulk density (r=0.268), soil urease (r=0.549) and soil dehydrogenase (r=0.492). Altitude (r=-0.561) and soil moisture content (r=-0.051) showed negative correlation. Altitudinal gradient along with the vegetation and soil physico-chemical parameters were found to influence bacterial diversity and distribution. This study points out that this is a biome with a vast reservoir of bacteria which decrease with increasing altitudes, and highlights the microbiological importance of the poorly studied Eastern Himalayan range, justifying efforts to explore the prevalence of novel species in the biome.

Hybrid incompatibility arises in a sequence-based bioenergetic model of transcription factor binding.

PubMed

Tulchinsky, Alexander Y; Johnson, Norman A; Watt, Ward B; Porter, Adam H

2014-11-01

Postzygotic isolation between incipient species results from the accumulation of incompatibilities that arise as a consequence of genetic divergence. When phenotypes are determined by regulatory interactions, hybrid incompatibility can evolve even as a consequence of parallel adaptation in parental populations because interacting genes can produce the same phenotype through incompatible allelic combinations. We explore the evolutionary conditions that promote and constrain hybrid incompatibility in regulatory networks using a bioenergetic model (combining thermodynamics and kinetics) of transcriptional regulation, considering the bioenergetic basis of molecular interactions between transcription factors (TFs) and their binding sites. The bioenergetic parameters consider the free energy of formation of the bond between the TF and its binding site and the availability of TFs in the intracellular environment. Together these determine fractional occupancy of the TF on the promoter site, the degree of subsequent gene expression and in diploids, and the degree of dominance among allelic interactions. This results in a sigmoid genotype-phenotype map and fitness landscape, with the details of the shape determining the degree of bioenergetic evolutionary constraint on hybrid incompatibility. Using individual-based simulations, we subjected two allopatric populations to parallel directional or stabilizing selection. Misregulation of hybrid gene expression occurred under either type of selection, although it evolved faster under directional selection. Under directional selection, the extent of hybrid incompatibility increased with the slope of the genotype-phenotype map near the derived parental expression level. Under stabilizing selection, hybrid incompatibility arose from compensatory mutations and was greater when the bioenergetic properties of the interaction caused the space of nearly neutral genotypes around the stable expression level to be wide. F2's showed higher hybrid incompatibility than F1's to the extent that the bioenergetic properties favored dominant regulatory interactions. The present model is a mechanistically explicit case of the Bateson-Dobzhansky-Muller model, connecting environmental selective pressure to hybrid incompatibility through the molecular mechanism of regulatory divergence. The bioenergetic parameters that determine expression represent measurable properties of transcriptional regulation, providing a predictive framework for empirical studies of how phenotypic evolution results in epistatic incompatibility at the molecular level in hybrids. Copyright © 2014 by the Genetics Society of America.

THE DIAGNOSIS OF FEMALE GENITAL TUMORS WITH RADIOISOTOPES (in Italian)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Paroli, G.; Zacutti, A.; Turchetti, G.

1963-04-01

The use of radioactive tracer substances for demonstrating the early stages of tumors of the genital organs is considered. As regards the external genital organs, patients with acute or chronic vulvitis, kraurosis vulvar with or without leukoplakia, and cancer were examined by measuring the radioactivity with a Geiger-Muller counter 6, 24, and 48 hr after the injection of 3 C of P/sup 32/ per kg of body weight. The results indicate that investigation of the uptake of radiophorphorus in the vulva can yield valuable information as to the nature of the various conditions considered. Measurements were made with a Geiger-Mullermore » probe counter over the portio in normal cases and in patients with different types of disease (erosions, polyps, cancer) at various intervals after the injection of the same dose of P/sup 32/ intravenously. It was shown that a high uptake can be demonstrated in vivo in the neoplastic tissues as compared with the normal tissues. The difference is most significant between the 48th and 72nd hr, when the values measured over erosions and polyps remain within the range of normal. The method therefore makes it possible to identify areas of neoplastic tissue in the portio and to establish their boundaries faily well. The uptake of P/sup 32/ was investigated in cases of cancer of the neck of the uterus before and after radium therapy. It was found that the method is valuable in establishing the prognosis and as a method for controlling the effects of irradiation. Finally, the results obtained in the field of the diagnosis of ovarian tumors with the use of gamma-emitting tracer substances (radioiodinated human serum albumin and I/sup 131/-labeled diiodofluorescein) and those of intra- operative investigation of lymph nodes containing metastases in cases of cancer of the cervix after the administration of P/sup 32/ are presented. The importance of the method, especially as regards the possibilities of completely removing all lymph nodes involved by the tumor, is discussed. (auth)« less

Nestin expression in the retina of rats with inherited retinal degeneration.

PubMed

Valamanesh, Fatemeh; Monnin, Julie; Morand-Villeneuve, Nadège; Michel, Germaine; Zaher, Murhaf; Miloudi, Sofiane; Chemouni, Deborah; Jeanny, Jean-Claude; Versaux-Botteri, Claudine

2013-05-01

Nestin is found in radial glia and neuronal/glial progenitor cells during retinal development, and is re-expressed after acute damage in the retina of adult mammals. We have investigated nestin expression in the retina of the Royal College of Surgeons (RCS) rat model of human inherited blindness, Retinitis pigmentosa (RP). During the first postnatal week, nestin immunoreactivity was located in elongated processes resembling radial glia in both control and dystrophic animals. During the second postnatal week, the density of nestin immunoreactive radial processes decreased progressively starting in the outer retina. At postnatal day 20 (PNd20), Nestin immunoreactive radial processes were no longer visible, with immunoreactivity restricted to structures resembling Müller end-feet and/or astrocytes located in the ganglion cell layer (GCL) in both control and dystrophic rats. These morphological results were confirmed by Western blotting and qPCR analysis. The level of nestin remained low in control animals at different time points up to 1 year, but we observed a re-expression of this protein from PNd30 in the dystrophic animals. The morphology of cells re-expressing nestin resembled that of radial glia and/or Muller cells, but co-localization of nestin and glutamine synthetase (GS: a marker of mature Müller cells) was only partial. Interestingly, whereas Western blot analysis confirmed the increase in protein levels from PNd30 onwards, mRNA levels remained low in dystrophic rats. Additional studies demonstrated that the discrepancy between protein and mRNA contents could be due to a dysfunction in proteasome activity as often observed in neurodegenerative pathologies. In conclusion, because of its localization in astrocytes and in radial processes resembling radial glia in the pathologic adult retina, nestin may be involved in mechanisms such as cell migration, generation of new neurons or glial cells and/or in retinal (re)modeling in dystrophic adult animals. The lack of concomitant up-regulation of mRNAs in adult dystrophic animals suggests that the pathology could lead to transcriptional and/or metabolic changes involving the stabilization of the half-life and/or dysregulation of degradation processes of nestin protein. Copyright © 2013 Elsevier Ltd. All rights reserved.

Supporting lander and rover operation: a novel super-resolution restoration technique

NASA Astrophysics Data System (ADS)

Tao, Yu; Muller, Jan-Peter

2015-04-01

Higher resolution imaging data is always desirable to critical rover engineering operations, such as landing site selection, path planning, and optical localisation. For current Mars missions, 25cm HiRISE images have been widely used by the MER & MSL engineering team for rover path planning and location registration/adjustment. However, 25cm is not high enough resolution to be able to view individual rocks (≤2m in size) or visualise the types of sedimentary features that rover onboard cameras might observe. Nevertheless, due to various physical constraints (e.g. telescope size and mass) from the imaging instruments themselves, one needs to be able to tradeoff spatial resolution and bandwidth. This means that future imaging systems are likely to be limited to resolve features larger than 25cm. We have developed a novel super-resolution algorithm/pipeline to be able to restore higher resolution image from the non-redundant sub-pixel information contained in multiple lower resolution raw images [Tao & Muller 2015]. We will demonstrate with experiments performed using 5-10 overlapped 25cm HiRISE images for MER-A, MER-B & MSL to resolve 5-10cm super resolution images that can be directly compared to rover imagery at a range of 5 metres from the rover cameras but in our case can be used to visualise features many kilometres away from the actual rover traverse. We will demonstrate how these super-resolution images together with image understanding software can be used to quantify rock size-frequency distributions as well as measure sedimentary rock layers for several critical sites for comparison with rover orthorectified image mosaic to demonstrate optimality of using our super-resolution resolved image to better support future lander and rover operation in future. We present the potential of super-resolution for virtual exploration to the ˜400 HiRISE areas which have been viewed 5 or more times and the potential application of this technique to all of the ESA ExoMars Trace Gas orbiter CaSSiS stereo, multi-angle and colour camera images from 2017 onwards. Acknowledgements: The research leading to these results has received funding from the European Community's Seventh Framework Programme (FP7/2007-2013) under grant agreement No.312377 PRoViDE.

The cell clone ecology hypothesis and the cell fusion model of cancer progression and metastasis (II): three pathways for spontaneous cell-cell fusion and escape from the intercellular matrix.

PubMed

Parris, George

2006-01-01

The two-stage initiation-progression model of cancer is widely accepted. Initiation appears to result most often from accumulation of damage to the DNA expressed as multiple mutations in the phenotype. Unsymmetrical chromosome segregation during mitosis of normal or mutated cells produces aneuploid cells and also contributes to the evolution of neoplasia. However, it has been pointed out (Parris GE. Med Hypotheses 2005;65:993-4 and 2006;66:76-83) that DNA damage and loss of chromosomes are much more likely to lead the mutant clones of cells to extinction than to successful expansion (e.g., an example of Muller's Ratchet). It was argued that aneuploid neoplasia represent new parasite species that successfully evolve to devour their hosts by incorporating sex-like redistribution of chromosomes through spontaneous or virus-catalyzed cell-cell fusion into their life-cycle. Spontaneous cell-cell fusion is generally blocked by the intercellular matrix to which the cells are bound via surface adhesion molecules (frequently glycoproteins, e.g., CD44). In order for progression of matrix-contained neoplasia toward clinically significant cancer to occur, the parasite cells must escape from the matrix and fuse. Release from the matrix also allows the parasite cells to invade adjacent tissues and metastasize to remote locations. Both invasion and metastasis likely involve fusion of the migrating parasite cells with fusion-prone blast cells. There are at least three pathways through which parasite cells can be liberated from the confining matrix: (i) Their adhesion molecules may be modified (e.g., by hyper-glycosylation) so that they can no longer grip the matrix. (ii) Their adhesion molecules or matrix may be saturated with other ligands (e.g., polyamines). (iii) Their adhesion molecules may be cleaved from the cell surface or the matrix itself may be cleaved (e.g., by MMPs or ADAMs). It is hypothesized that mobilization of parasite cells and cell-cell fusion go hand-in-hand in the progression of neoplasia to clinically significant cancer through invasion and metastasis. The latency between tumor recognition and exposure to mutagens and the increased incidence of cancer with age can probably be related to slow breakdown of the intercellular matrix that provides a barrier to cell-cell fusion.

Growth Rates and Mechanisms of Magmatic Orbicule Formation: Insights from Calcium Isotopes

NASA Astrophysics Data System (ADS)

Antonelli, M. A.; Watkins, J. M.; DePaolo, D. J.

2017-12-01

Orbicular diorites and granites are rare plutonic rock textures that remain enigmatic despite a century of study. Orbicules consist of a rounded core (xenolith, xenocryst, or autolith) surrounded by a variable number of concentric rings defined by different modal mineralogies and textures. Recent work suggests that the alternating layers of mineral growth are a consequence of either changes in external conditions of the magma (e.g. temperature, magma composition due to mixing, changes in volatile abundances), or rapid growth of one mineral phase (e.g plagioclase) creating a depleted boundary layer that then promotes precipitation of an alternative mineral phase (e.g. pyroxene). This process can be repeated to produce multiple layers. The rates at which orbicules grow is also of interest and relates to the mechanisms. Studies of orbicular diorites from the northern Sierra Nevada suggest exceptionally high growth rates (McCarthy et al., 2016). Ca isotopes can offer a unique perspective on orbicule formation, as diffusive isotope fractionation should be substantial when growth rates are high, and they are also sensitive to the nature of the growth medium (silicate liquid or supercritical fluid phase). We present δ44Ca measurements and chemistry for a transect of a dioritic orbicule collected from Emerald Lake, California (Sierra Nevada), where the growth layers are defined by variations in plagioclase/pyroxene ratio, grain size, and texture. Ca concentration varies from 5-13 wt%, and d44Ca values oscillate between -0.5 to 0.0‰ relative to BSE, correlating with changes in mineralogy and texture. Zones of plagioclase comb texture are associated with negative δ44Ca excursions of -0.2 to -0.4‰, consistent with diffusive isotope fractionation during rapid mineral growth. Assuming a 10‰ difference in diffusivity for 44Ca vs. 40Ca in dioritic liquids (Watson et al., 2016), and using the models of Watson and Muller (2009) as a guide, these small fractionations indicate relatively fast plagioclase growth rates, of order 10 cm/yr, or growth from an aqueous medium where diffusive fractionation would be smaller. The growth rates suggested by our models imply that the mineralogical layering is likely to represent changes in external conditions of the host magma.

Identifying Surface Changes on HRSC Images of the Mars South Polar Residual CAP (sprc)

NASA Astrophysics Data System (ADS)

Putri, Alfiah Rizky Diana; Sidiropoulos, Panagiotis; Muller, Jan-Peter

2016-06-01

The surface of Mars has been an object of interest for planetary research since the launch of Mariner 4 in 1964. Since then different cameras such as the Viking Visual Imaging Subsystem (VIS), Mars Global Surveyor (MGS) Mars Orbiter Camera (MOC), and Mars Reconnaissance Orbiter (MRO) Context Camera (CTX) and High Resolution Imaging Science Experiment (HiRISE) have been imaging its surface at ever higher resolution. The High Resolution Stereo Camera (HRSC) on board of the European Space Agency (ESA) Mars Express, has been imaging the Martian surface, since 25th December 2003 until the present-day. HRSC has covered 100 % of the surface of Mars, about 70 % of the surface with panchromatic images at 10-20 m/pixel, and about 98 % at better than 100 m/pixel (Neukum et. al., 2004), including the polar regions of Mars. The Mars polar regions have been studied intensively recently by analysing images taken by the Mars Express and MRO missions (Plaut et al., 2007). The South Polar Residual Cap (SPRC) does not change very much in volume overall but there are numerous examples of dynamic phenomena associated with seasonal changes in the atmosphere. In particular, we can examine the time variation of layers of solid carbon dioxide and water ice with dust deposition (Bibring, 2004), spider-like channels (Piqueux et al., 2003) and so-called Swiss Cheese Terrain (Titus et al., 2004). Because of seasonal changes each Martian year, due to the sublimation and deposition of water and CO2 ice on the Martian south polar region, clearly identifiable surface changes occur in otherwise permanently icy region. In this research, good quality HRSC images of the Mars South Polar region are processed based on previous identification as the optimal coverage of clear surfaces (Campbell et al., 2015). HRSC images of the Martian South Pole are categorized in terms of quality, time, and location to find overlapping areas, processed into high quality Digital Terrain Models (DTMs) and Orthorectified Images (ORIs) and projected into polar stereographic projection using DLR (Deutsches Zentrum für Luft- und Raumfahrt; German Aerospace Center)'s VICAR and GIS software with modifications developed by Kim & Muller (2009). Surface changes are identified in the Mars SPRC region and analysed based on their appearance in the HRSC images.

Evaluation on radiation protection aspect and radiological risk at Mukim Belanja repository

NASA Astrophysics Data System (ADS)

Azmi, Siti Nur Aisyah; Kenoh, Hamiza; Majid, Amran Ab.

2016-01-01

Asian Rare Earth (ARE) is a locally incorporated company that operated a mineral processing operation to extract rare earth element. ARE has received much attention from the public since the beginning of their operation until the work of decommissioning and decontamination of the plant. Due to the existence of Naturally Occurring Radioactive Material (NORM) in the residue, the decommissioning and disposal was done by the company in collaboration with the Perak State Government and the Atomic Energy Licensing Board (AELB). The main objective of this study is to review the level of compliance of the existing Radiation Protection Regulations enforced by AELB particularly in the achievement of allowed exposure dose limit. The next objective was to study the impact of the construction of the Mukim Belanja Repository to workers and public. This study was conducted by analyzing documents that were issued and conducting the area monitoring using a Geiger Muller detector (GM) and Sodium Iodide (NaI(Tl)) survey meters. The measurements were made at 5 cm and 1 m from the ground surface at 27 measurement stations. The external doses measured were within the background levels of the surrounding area. The annual effective dose using the highest reading at 5 cm and 1 m from ground surface by GM detector was calculated to be 1.36 mSv/year and 1.21 mSv/year respectively. Whereas the annual effective dose using the highest reading at 5 cm and 1 m from ground surface by using NaI(Tl) detector was calculated to be 3.31 mSv/year and 2.83 mSv/year respectively. The calculated cancer risks from the study showed that the risk is small compared with the risks derived from natural radiation based on global annual radiation dose to humans. This study therefore indicated that the repository is able to constrain the dose exposure from the disposed NORM waste. The study also revealed that the construction of the repository has complied with all the rules and regulations subjected to it. The exposed dose received by the radiation and the public workers during the construction of the repository were below the annual limit i.e. 20 mSv/year and 1mSv/year respectively.

A Promising Tool in Retina Regeneration: Current Perspectives and Challenges When Using Mesenchymal Progenitor Stem Cells in Veterinary and Human Ophthalmological Applications.

PubMed

Cislo-Pakuluk, Anna; Marycz, Krzysztof

2017-10-01

Visual impairment is a common ailment of the current world population, with more exposure to CCD screens and fluorescent lighting, approximately 285 billion people suffer from this deficiency and 13% of those are considered clinically blind. More common causes for visual impairment include age-related macular degeneration (AMD), glaucoma and diabetic retinopathy (Zhu et al. Molecular Medicine Reports, 2015; Kolb et al. 2007; Machalińska et al. Current Eye Research, 34(9),748-760, 2009) among a few. As cases of retinal and optic nerve diseases rise, it is vital to find a treatment, which has led to investigation of the therapeutic potential of various stem cells types (Bull et al. Investigative Opthalmology & Visual Science, 50(9), 4244, 2009; Bull et al. Investigative Opthalmology & Visual Science, 49(8), 3449, 2008; Yu et al. Biochemical and Biophysical Research Communications, 344(4), 1071-1079, 2006; Na et al. Graefe's Archive for Clinical and Experimental Ophthalmology, 247(4), 503-514, 2008). In previous studies, some of the stem cell variants used include human Muller SCs and bone marrow derived SCs. Some of the regenerative potential characteristics of mesenchymal progenitor stem cells (MSCs) include their multilineage differentiation potential, their immunomodulatory effects, their high proliferative activity, they can be easily cultured in vitro, and finally their potential to synthesize and secrete membrane derived vesicles rich in growth factors, mRNA and miRNA which possibly aid in regulation of tissue damage regeneration. These facts alone, explain why MSCs are so widely used in clinical trials, 350 up to date (Switonski, Reproductive Biology, 14(1), 44-50, 2014). Animal studies have demonstrated that sub-retinal transplantation of MSCs delays retinal degeneration and preserves retinal function through trophic response (Inoue et al. Experimental Eye Research, 85(2), 234-241, 2007). Umbilical cord derived MSCs (UC/MSCs) have also been shown to contain neuroprotective features of ganglion cells in rat studies (Zwart et al. Experimental Neurology, 216(2), 439-448, 2009). This review aims to present current MSC therapies in practice, as well as their retinal regeneration potential in animal models, and their innovative prospects for treatment of human retinal diseases.

Decoding mass-independent fractionation of sulfur isotopes in modern atmosphere using cosmogenic 35S: A five-isotope approach and possible implications for Archean sulfur isotope records

NASA Astrophysics Data System (ADS)

Lin, M.; Thiemens, M. H.; Shen, Y.; Zhang, X.; Huang, X.; Chen, K.; Zhang, Z.; Tao, J.

2017-12-01

The signature of sulfur isotopic mass-independent fractionation (S-MIF) observed in Archean sediments have been interpreted as a proxy of the origins and evolution of atmospheric oxygen and early life on Earth [1]. Photochemistry of SOx in the short (< 290 nm) wavelength region accounts for much of the Archean record, but the S-MIF widely observed in modern tropospheric sulfate aerosols remains unexplained, indicating embedded uncertainties in interpreting Archean S-MIF records [2]. Here we present combined measurements of cosmogenic 35S (a stratospheric tracer) [3] and all four stable sulfur isotopes in the same modern atmospheric sulfate samples to define the mechanisms. The five-sulfur-isotope approach reveals that an altitude-dependent process (probably SOx photochemistry) mainly contributes to a positive Δ33S and a combustion-related process mainly leads to a negative Δ36S. After eliminating combustion impacts, the obtained Δ36S/Δ33S slope of -4.0 in the modern atmosphere is close to the Δ36S/Δ33S slope (-3.6) in some records from Paleoarchean [4], an era probably with active volcanism [5]. The significant role of volcanic OCS in the Archean atmosphere has been called for in terms of its ability to provide a continual SO2 high altitude source for photolysis [2]. The strong but previously underappreciated stratospheric signature of S-MIF in tropospheric sulfates suggests that a more careful investigation of wavelength-dependent sulfur isotopic fractionation at different altitudes are required. The combustion-induced negative Δ36S may be linked to recombination reactions of elemental sulfur [6], and relevant experiments are being conducted to test the isotope effect. Although combustion is unlikely in Archean, recombination reactions may occur in other previously unappreciated processes such as volcanism and may contribute in part to the heavily depleted 36S in some Paleoarchean records [5,7]. The roles of both photochemical and non-photochemical reactions in the variability of Archean S-MIF records require further analysis in the future. Refs: [1] Farquhar et al., Science 2000; [2] Shaheen et al., PNAS 2014; [3] Lin et al., PNAS 2016; [4] Wacey et al., Precambrian Res 2015; [5] Muller et al., PNAS 2016; [6] Babikov, PNAS 2017; [7] Shen et al., EPSL, 2009.

Evaluation on radiation protection aspect and radiological risk at Mukim Belanja repository

DOE Office of Scientific and Technical Information (OSTI.GOV)

Azmi, Siti Nur Aisyah, E-mail: nuclear.aisyahazmi@gmail.com; Kenoh, Hamiza; Majid, Amran Ab.

2016-01-22

Asian Rare Earth (ARE) is a locally incorporated company that operated a mineral processing operation to extract rare earth element. ARE has received much attention from the public since the beginning of their operation until the work of decommissioning and decontamination of the plant. Due to the existence of Naturally Occurring Radioactive Material (NORM) in the residue, the decommissioning and disposal was done by the company in collaboration with the Perak State Government and the Atomic Energy Licensing Board (AELB). The main objective of this study is to review the level of compliance of the existing Radiation Protection Regulations enforcedmore » by AELB particularly in the achievement of allowed exposure dose limit. The next objective was to study the impact of the construction of the Mukim Belanja Repository to workers and public. This study was conducted by analyzing documents that were issued and conducting the area monitoring using a Geiger Muller detector (GM) and Sodium Iodide (NaI(Tl)) survey meters. The measurements were made at 5 cm and 1 m from the ground surface at 27 measurement stations. The external doses measured were within the background levels of the surrounding area. The annual effective dose using the highest reading at 5 cm and 1 m from ground surface by GM detector was calculated to be 1.36 mSv/year and 1.21 mSv/year respectively. Whereas the annual effective dose using the highest reading at 5 cm and 1 m from ground surface by using NaI(Tl) detector was calculated to be 3.31 mSv/year and 2.83 mSv/year respectively. The calculated cancer risks from the study showed that the risk is small compared with the risks derived from natural radiation based on global annual radiation dose to humans. This study therefore indicated that the repository is able to constrain the dose exposure from the disposed NORM waste. The study also revealed that the construction of the repository has complied with all the rules and regulations subjected to it. The exposed dose received by the radiation and the public workers during the construction of the repository were below the annual limit i.e. 20 mSv/year and 1mSv/year respectively.« less

Experimental Investigation and Analysis of HEC-6 River Morphological Model

NASA Astrophysics Data System (ADS)

Tingsanchali, Tawatchai; Supharatid, Seree

1996-05-01

Only comparatively few experimental studies have been carried out to investigate the performance of the HEC-6 river morphological model. The model was developed by the Hydrologic Engineering Center of the US Army Corps of Engineers. In this study, experiments were carried out in a 20 m long concrete flume 0.6 m wide with varying rectangular cross-sections. The channel bed is paved with uniform sand of D50 = 0.9 mm and D90 = 1.2 mm within the test reach of 12 m. Two types of experiments were carried out with sediment transport, one under steady uniform flow and another under steady non-uniform flow conditions. Nine steady uniform flow experiments were carried out to compare the measured equilibrium relationship of flow and sediment transport rate with two bedload formulae, namely, Du Boys and Meyer-Peter and Muller, and with three total load formulae, namely, Toffaleti, Laursen and Yang. It was found that even though the sediment transport consists of a certain portion of bedload, the total load formulae give satisfactory results and better agreement than the two bedload formulae. Five steady non-uniform flow experiments were carried out under various conditions of varying bed profile and channel width and also with sediment addition and withdrawal. The measured transient water surface and bed profiles are compared with the computed results from the HEC-6 model. It was found that the Toffaleti and Yang total load formulae used in the HEC-6 model give the most satisfactory prediction of actual bed profiles under various conditions of non-uniform flow and sediment transport. The effects of Manning's n, variations of sediment inflow, various sediment transport formulae, sediment grain size and the model numerical parameters, i.e. distance interval x and numerical weighting factor, on the computed water surface and bed profiles were determined. It was found that the selection of the sediment transport formulae has the most significant effect on the computed results. It can be concluded that the HEC-6 model can predict satisfactorily a long-term average pattern of local scour and deposition along a channel with either a small abrupt change in geometry or gradually varying cross-sections. However, the accuracy of the model prediction is reduced in the regions where highly non-uniform flow occurs.

Spatial orientation of the vestibular system

NASA Technical Reports Server (NTRS)

Raphan, T.; Dai, M.; Cohen, B.

1992-01-01

1. A simplified three-dimensional state space model of visual vestibular interaction was formulated. Matrix and dynamical system operators representing coupling from the semicircular canals and the visual system to the velocity storage integrator were incorporated into the model. 2. It was postulated that the system matrix for a tilted position was a composition of two linear transformations of the system matrix for the upright position. One transformation modifies the eigenvalues of the system matrix while another rotates the pitch and roll eigenvectors with the head, while maintaining the yaw axis eigenvector approximately spatially invariant. Using this representation, the response characteristics of the pitch, roll, and yaw eye velocity were obtained in terms of the eigenvalues and associated eigenvectors. 3. Using OKAN data obtained from monkeys and comparing to the model predictions, the eigenvalues and eigenvectors of the system matrix were identified as a function of tilt to the side or of tilt to the prone positions, using a modification of the Marquardt algorithm. The yaw eigenvector for right-side-down tilt and for downward pitch cross-coupling was approximately 30 degrees from the spatial vertical. For the prone position, the eigenvector was computed to be approximately 20 degrees relative to the spatial vertical. For both side-down and prone positions, oblique OKN induced along eigenvector directions generated OKAN which decayed to zero along a straight line with approximately a single time constant. This was verified by a spectral analysis of the residual sequence about the straight line fit to the decaying data. The residual sequence was associated with a narrow autocorrelation function and a wide power spectrum. 4. Parameters found using the Marquardt algorithm were incorporated into the model. Diagonal matrices in a head coordinate frame were introduced to represent the direct pathway and the coupling of the visual system to the integrator. Model simulations predicted the behavior of yaw and pitch OKN and OKAN when the animal was upright, as well as the cross-coupling in the tilted position. The trajectories in velocity space were also accurately simulated. 5. There were similarities between the monkey eigenvectors and human perception of the spatial vertical. For side-down tilts and downward eye velocity cross-coupling, there was only an Aubert (A) effect. For upward eye velocity cross-coupling there were both Muller (E) and Aubert (A) effects. The mean of the eigenvectors for upward and downward eye velocities overlay human 1 x g perceptual data.(ABSTRACT TRUNCATED AT 400 WORDS).

Automatic Detection of Changes on Mars Surface from High-Resolution Orbital Images

NASA Astrophysics Data System (ADS)

Sidiropoulos, Panagiotis; Muller, Jan-Peter

2017-04-01

Over the last 40 years Mars has been extensively mapped by several NASA and ESA orbital missions, generating a large image dataset comprised of approximately 500,000 high-resolution images (of <100m resolution). The overall area mapped from orbital imagery is approximately 6 times the overall surface of Mars [1]. The multi-temporal coverage of Martian surface allows a visual inspection of the surface to identify dynamic phenomena, i.e. surface features that change over time, such as slope streaks [2], recurring slope lineae [3], new impact craters [4], etc. However, visual inspection for change detection is a limited approach, since it requires extensive use of human resources, which is very difficult to achieve when dealing with a rapidly increasing volume of data. Although citizen science can be employed for training and verification it is unsuitable for planetwide systematic change detection. In this work, we introduce a novel approach in planetary image change detection, which involves a batch-mode automatic change detection pipeline that identifies regions that have changed. This is tested in anger, on tens of thousands of high-resolution images over the MC11 quadrangle [5], acquired by CTX, HRSC, THEMIS-VIS and MOC-NA instruments [1]. We will present results which indicate a substantial level of activity in this region of Mars, including instances of dynamic natural phenomena that haven't been cataloged in the planetary science literature before. We will demonstrate the potential and usefulness of such an automatic approach in planetary science change detection. Acknowledgments: The research leading to these results has received funding from the STFC "MSSL Consolidated Grant" ST/K000977/1 and partial support from the European Union's Seventh Framework Programme (FP7/2007-2013) under iMars grant agreement n° 607379. References: [1] P. Sidiropoulos and J. - P. Muller (2015) On the status of orbital high-resolution repeat imaging of Mars for the observation of dynamic surface processes. Planetary and Space Science, 117: 207-222. [2] O. Aharonson, et al. (2003) Slope streak formation and dust deposition rates on Mars. Journal of Geophysical Research: Planets, 108(E12):5138 [3] A. McEwen, et al. (2011) Seasonal flows on warm martian slopes. Science, 333 (6043): 740-743. [4] S. Byrne, et al. (2009) Distribution of mid-latitude ground ice on mars from new impact craters. Science, 325(5948):1674-1676. [5] K. Gwinner, et al (2016) The High Resolution Stereo Camera (HRSC) of Mars Express and its approach to science analysis and mapping for Mars and its satellites. Planetary and Space Science, 126: 93-138.

Systematic flood modelling to support flood-proof urban design

NASA Astrophysics Data System (ADS)

Bruwier, Martin; Mustafa, Ahmed; Aliaga, Daniel; Archambeau, Pierre; Erpicum, Sébastien; Nishida, Gen; Zhang, Xiaowei; Pirotton, Michel; Teller, Jacques; Dewals, Benjamin

2017-04-01

Urban flood risk is influenced by many factors such as hydro-meteorological drivers, existing drainage systems as well as vulnerability of population and assets. The urban fabric itself has also a complex influence on inundation flows. In this research, we performed a systematic analysis on how various characteristics of urban patterns control inundation flow within the urban area and upstream of it. An urban generator tool was used to generate over 2,250 synthetic urban networks of 1 km2. This tool is based on the procedural modelling presented by Parish and Müller (2001) which was adapted to generate a broader variety of urban networks. Nine input parameters were used to control the urban geometry. Three of them define the average length, orientation and curvature of the streets. Two orthogonal major roads, for which the width constitutes the fourth input parameter, work as constraints to generate the urban network. The width of secondary streets is given by the fifth input parameter. Each parcel generated by the street network based on a parcel mean area parameter can be either a park or a building parcel depending on the park ratio parameter. Three setback parameters constraint the exact location of the building whithin a building parcel. For each of synthetic urban network, detailed two-dimensional inundation maps were computed with a hydraulic model. The computational efficiency was enhanced by means of a porosity model. This enables the use of a coarser computational grid , while preserving information on the detailed geometry of the urban network (Sanders et al. 2008). These porosity parameters reflect not only the void fraction, which influences the storage capacity of the urban area, but also the influence of buildings on flow conveyance (dynamic effects). A sensitivity analysis was performed based on the inundation maps to highlight the respective impact of each input parameter characteristizing the urban networks. The findings of the study pinpoint which properties of urban networks have a major influence on urban inundation flow, enabling better informed flood-proof urban design. References: Parish, Y. I. H., Muller, P. 2001. Procedural modeling of cities. SIGGRAPH, pp. 301—308. Sanders, B.F., Schubert, J.E., Gallegos, H.A., 2008. Integral formulation of shallow-water equations with anisotropic porosity for urban flood modeling. Journal of Hydrology 362, 19-38. Acknowledgements: The research was funded through the ARC grant for Concerted Research Actions, financed by the Wallonia-Brussels Federation.

Links between the distribution of intermediate depth seismicity and structure of the incoming plate in the Lesser Antilles arc

NASA Astrophysics Data System (ADS)

Bie, L.; Garth, T.; Rietbrock, A.

2017-12-01

The Lesser Antilles subduction zone offers a unique opportunity to study the subduction of oceanic material formed at a slow spreading mid-ocean ridge. The seismicity rates in the Lesser Antilles subduction zone vary strongly along the arc, and low seismicity rates in the Southern part of the Arc have made accurate mapping of the slab at depth difficult. Here we present an innovative method of constraining the slab geometry using global earthquake catalogue data, and a prescribed formula for the geometry of the slab. The global earthquake catalogues are filtered for events of different quality, and the slab fit is weighted to events that are well located by observations at several stations. This allows a series of slab profiles to be fitted to the seismicity within the slab. These profiles are used to produce a smoothed slab geometry for the whole arc. The results confirm the marked difference in the slab geometry between the steeply dipping Northern part (> 14°latitude) of the arc and the more shallow dip of the Southern part of the arc (< 14° latitude). The change in dip at 14° latitude occurs abruptly. We therefore support the hypothesis that the North and South parts of the arc are in fact separate subducting plates with a distinct gap between them. This theory has previously been supported by tele-seismic tomography (Benthem et al., 2013), and shear wave splitting observations in the region. In addition, the subducted slab geometry beneath the Lesser Antilles is used to quantify variations in the thickness of the WBZ (Wadati-Benioff zone) seismicity along strike. We find a significant variation in the WBZ thickness along strike, which cannot be explained by the relatively small variation in age of the incoming plate. We propose that these variations are instead explained by pre-existing structures in the subducting plate. The thickness of the WBZ correlates well with the occurrence of paleo-spreading ridges of the incoming plate, as inferred from global plate age models (Muller et al., 2008). Ridges on the incoming plate, inferred from variations in the gravity anomaly, and related to transform faults at the spreading ridge, correlate with marked changes in the thickness of the WBZ along the arc. These findings support the hypothesis that there is a direct link between WBZ seismicity and hydration of the mantle of the incoming plate.

Projections of long-term changes in solar radiation based on CMIP5 climate models and their influence on energy yields of photovoltaic systems

NASA Astrophysics Data System (ADS)

Wild, Martin; Folini, Doris; Henschel, Florian; Müller, Björn

2015-04-01

Traditionally, for the planning and assessment of solar energy systems, the amount of solar radiation (sunlight) incident on the Earth's surface is assumed to be constant over the years. However, with changing climate and air pollution levels, solar resources may no longer be stable over time and undergo substantial decadal changes. Observational records covering the past decades confirm long-term changes in this quantity. Here we examine, how the latest generation of climate models used for the 5th IPCC report projects potential changes in surface solar radiation over the coming decades, and how this may affect, in combination with the expected greenhouse warming, solar power output from photovoltaic (PV) systems. For this purpose, projections up to the mid 21th century from 39 state of the art climate models from the Coupled Model Intercomparison Project Phase 5 (CMIP5) are analysed globally and for selected key regions with major solar power production capacity. The large model ensemble allows to assess the degree of consistency of their projections. Models are largely consistent in the sign of the projected changes in solar radiation under cloud-free conditions as well as in surface temperatures over most of the globe, while still reasonably consistent over a considerable part of the globe in the sign of changes in cloudiness and associated changes in solar radiation. A first order estimate of the impact of solar radiation and temperature changes on energy yields of PV systems under the RPC8.5 scenario indicates statistically significant decreases in PV outputs in large parts of the world, but notable exceptions with positive trends in parts of Europe and the South-East of China. Projected changes between 2006 and 2049 under the RCP8.5 scenario overall are on the order of 1 % per decade for horizontal planes, but may be larger for tilted or tracked planes as well as on shorter (decadal) timescales. Related References: Wild, M., Folini, D., Henschel, F., and Müller, B. 2015: Projections of long-term changes in solar radiation based on CMIP5 climate models and their influence on energy yields of photovoltaic systems, submitted. Muller, B., Wild, M., Driesse, A., and Behrens, K., 2014: Rethinking solar resource assessments in the context of global dimming and brightening, Solar Energy, 99, 272-282. Wild, M. 2012: Enlightening Global Dimming and Brightening. Bull. Amer. Meteor. Soc., 93, 27-37, doi:10.1175/BAMS-D-11-00074.1

Does using a polyethylene RM press-fit cup modify the preparation of the acetabulum and acetabular offset in primary hip arthroplasty?

PubMed

Erivan, R; Aubret, S; Villatte, G; Mulliez, A; Descamps, S; Boisgard, S

2017-09-01

When performing total hip arthroplasty (THA), it is important to maintain the femoral and acetabular offsets to ensure good joint stability and to restore the function of the hip abductor muscles. In our practice, we mainly use a lateralized stem and hollow out the acetabulum to the quadrilateral plate to accommodate a press-fit polyethylene cup. However, the repercussions of this preparation method, which is driven by the cup's design, are not known. We carried out a retrospective study to assess: (1) the changes in the femoral and acetabular offset; (2) the height of the center of rotation; and (3) the repercussions on wear. We hypothesized there would be no significant differences between the preoperative and postoperative femoral and acetabular offsets. We reviewed 88 primary THA cases performed with the RM Pressfit™ cup that had a minimum of 5 years' follow-up. A lateralized self-locking Muller-type cemented femoral stem was used in 92.0% of cases and a standard stem in 8.0%. Measurements were done on plain radiographs with MHP™ and Mesurim Pro™ software. The average follow-up was 6.5 years (5-8). On average, the acetabular offset was reduced by 2.75mm±5.9 mm (range: -17.5 to +10.6 mm) (P<0.001) and the femoral offset was increased by 0.01mm±5.5 mm (range: -17.8 to +11.0 mm) (P=0.99). In terms of total offset, medialization of 2.74mm±7 mm (range: -17.7 to +18.2mm) was found (P=0.001). The acetabular center of rotation was on average 4.77mm±5.1 mm higher (P<0.001). The mean annual wear at the more recent follow-up (min.: 5 years) was 0.068mm (range: 0.01 to 0.25mm) per year. The wear was not impacted by having more than 5mm change in offset. Measurements of acetabular offset revealed statistically significant medialization due to the type of implant used and the surgical technique. The anatomical technique consists of positioning the cup in subchondral bone without contacting the quadrilateral plate. This preserves bone stock, which may be useful later on if the cup is revised, particularly in younger patients. Conversely, the femoral offset did not change significantly, despite the use of lateralized stems in 92.0% of cases. We measured an annual wear rate of 0.068mm per year, which is lower than in other published studies, possibly because our patient population was older. IV, retrospective study. Copyright © 2017 Elsevier Masson SAS. All rights reserved.

Profil épidémiologique des entérobactéries uropathogènes productrices de bêta-lactamases à spectre élargi

PubMed Central

Sbiti, Mohammed; Lahmadi, khalid; louzi, Lhoussaine

2017-01-01

Résumé Les infections urinaires à entérobactéries productrices de bêtalactamases à spectre élargi (E-BLSE) constituent un risque infectieux, un enjeu thérapeutique de taille et peuvent même conduire dans certains cas à des impasses du fait de leur multi-résistance aux antibiotiques. Le but de ce travail est de préciser le profil épidémiologique des (E-BLSE) uropathogènes et décrire leur niveau actuel de résistance aux antibiotiques pour une meilleure prise en charge des patients selon les données locales. Il s'agit d'une étude rétrospective sur une période de trois ans (du 1er janvier 2013 au 31 décembre 2015) concernant toutes les souches d'E-BLSE isolées de tous les ECBU traités au laboratoire de microbiologie de à l'Hôpital Militaire Moulay Ismail de Meknès. La culture a été faite selon les techniques usuelles, et l'antibiogramme a été réalisé par méthode de disque diffusion sous gélose Muller-Hinton selon les recommandations du Comité de l'antibiogramme de la Société française de microbiologie CA-SFM 2013/2014. Cette étude a permis de noter une importante prévalence globale d'isolement des E-BLSE (12.2%), particulièrement chez les patients hospitalisés (54.8%) dont la plus grande prévalence (72%) a été enregistrée dans le service d'urologie. Parmi ces E-BLSE Escherichia coli constitue la majorité (61%) des isolats, cependant au sein de la même espèce Klebsiella pneumoniae est le plus producteur de BLSE (25.8%). L'étude de l'antibioresistance des E-BLSE durant ces trois ans a mis en évidence des co-résistances à la ciprofloxacine (92.5%), au sulfametoxazole-trimethoprime (88,4%), à la gentamycine (67,2%). Globalement nos résultats sont en accord avec les données des autres pays méditerranéens exception faite pour l'amikacine dont la résistance est très basse (6.1%) dans notre étude. Cette étude a montré que la prévalence des E-BLSE en milieu hospitalier est importante et que sa diffusion en milieu communautaire est un fait préoccupant. Ces E-BLSE sont généralement résistantes aux antibiotiques, notamment des aux molécules utiles en urologie. PMID:29138665

Low temperature magnetic susceptibility behavior of the Neuschwanstein EL6 meteorite and mineral daubreelite (FeCr2S4)

NASA Astrophysics Data System (ADS)

Kohout, T.; Kletetschka, G.; Lehtinen, M.; Pesonen, L. J.; Wasilewski, P. J.

2006-12-01

Neuschwanstein meteorite (enstatite chondrite EL-6) fall occurred on April 6, 2002 close to Neuschwanstein castle in Bavaria, Germany. Total three meteorite bodies were found on the fall site. Two fragments coming from a 1750g body found on July 14, 2002 were obtained to the Division of Geophysics, University of Helsinki. The low temperature magnetic properties were investigated using KLY-3 and KLY-4 kappabridges equipped with low temperature control unit. During the low-temperature susceptibility measurements an unknown kink feature was observed at ~150 K on all measured samples. The closest known magnetic transition is the curie temperature Tc ~170 K of synthetic FeCr2S4 mentioned in Müller et al., 2006. FeCr2S4 is naturally present in enstatite chondrites and iron meteorites in the form of mineral daubreelite and was reported to be present in the Neuschwanstein meteorite in Zipfel and Dreibus, 2003. The extensive study of magnetic susceptibility of Neuschwanstein meteorite and daubreelite extract form Coahuila iron meteorite (hexahedrite, II A) was conducted in order to investigate the low temperature magnetic susceptibility of those materials and its field and frequency dependence. The results indicate Tc of natural daubreelite extract from Coahuila meteorite to be ~160 K what is slightly lower than the Tc of synthetic FeCr2S4 reported in Müller et al., 2006. The magnetic susceptibility of natural daubreelite from Coahuila meteorite and of ~150 K feature in Neuschwanstein meteorite show no field dependence of magnetic susceptibility. Due to the similarity in the low temperature magnetic susceptibility behaviour of Neuschwanstein meteorite and daubreelite extract from Coahuila meteorite we link the Neuschwanstein ~150 K feature to the Tc of daubreelite present in this meteorite. The 10 K difference of the Tc of daubreelite in Neuschwanstein and Coahuila meteorites can be attributed to the presence of impurities or structural deformations in the daubreelite crystals. Daubreelite with its Tc ~160 K may be significant magnetic mineral in cold space environment. However, warming to the terrestrial temperatures results in magnetic unblocking and lost of the magnetic information. The low temperature susceptibility measurements can be used to identify the presence of daubreelite in meteorites. References: C. Muller, V. Zestrea, V. Tsurkan, S. Horn, R. Tidecks and A. Wixforth (2006): SPIN-LATTICE COUPLING IN THE FERRIMAGNETIC SEMICONDUCTOR FeCr2S4 PROBED BY SURFACE ACOUSTIC WAVES. J. Appl. Phys. 99(2), 023906, 2006. J. Zipfel and G. Dreibus (2003): BULK CHEMISTRY OF NEUSCHWANSTEIN (EL6). 66th Annual Meteoritical Society Meeting (2003) Abstract no. A103.

Orientation of human optokinetic nystagmus to gravity: a model-based approach

NASA Technical Reports Server (NTRS)

Gizzi, M.; Raphan, T.; Rudolph, S.; Cohen, B.

1994-01-01

Optokinetic nystagmus (OKN) was induced by having subjects watch a moving display in a binocular, head-fixed apparatus. The display was composed of 3.3 degrees stripes moving at 35 degrees/s for 45 s. It subtended 88 degrees horizontally by 72 degrees vertically of the central visual field and could be oriented to rotate about axes that were upright or tilted 45 degrees or 90 degrees. The head was held upright or was tilted 45 degrees left or right on the body during stimulation. Head-horizontal (yaw axis) and head-vertical (pitch axis) components of OKN were recorded with electro-oculography (EOG). Slow phase velocity vectors were determined and compared with the axis of stimulation and the spatial vertical (gravity axis). With the head upright, the axis of eye rotation during yaw axis OKN was coincident with the stimulus axis and the spatial vertical. With the head tilted, a significant vertical component of eye velocity appeared during yaw axis stimulation. As a result the axis of eye rotation shifted from the stimulus axis toward the spatial vertical. Vertical components developed within 1-2 s of stimulus onset and persisted until the end of stimulation. In the six subjects there was a mean shift of the axis of eye rotation during yaw axis stimulation of approximately 18 degrees with the head tilted 45 degrees on the body. Oblique optokinetic stimulation with the head upright was associated with a mean shift of the axis of eye rotation toward the spatial vertical of 9.2 degrees. When the head was tilted and the same oblique stimulation was given, the axis of eye rotation rotated to the other side of the spatial vertical by 5.4 degrees. This counterrotation of the axis of eye rotation is similar to the "Muller (E) effect," in which the perception of the upright is counterrotated to the opposite side of the spatial vertical when subjects are tilted in darkness. The data were simulated by a model of OKN with a "direct" and "indirect" pathway. It was assumed that the direct visual pathway is oriented in a body, not a spatial frame of reference. Despite the short optokinetic after-nystagmus time constants, strong horizontal to vertical cross-coupling could be produced if the horizontal and vertical time constants were in proper ratio and there were no suppression of nystagmus in directions orthogonal to the stimulus direction. The model demonstrates that the spatial orientation of OKN can be achieved by restructuring the system matrix of velocity storage. We conclude that an important function of velocity storage is to orient slow-phase velocity toward the spatial vertical during movement in a terrestrial environment.

Adhesion and the Lamination/Failure of Stretchable Organic and Composite Organic/Inorganic Electronic Structures

NASA Astrophysics Data System (ADS)

Yu, Deying

Stretchable organic electronics have emerged as interesting technologies for several applications where stretchability is considered important. The easy and low-cost deposition procedures for the fabrication of stretchable organic solar cells and organic light emitting devices reduce the overall cost for the fabrication of these devices. However, the interfacial cracks and defects at the interfaces of the devices, during fabrication, are detrimental to the performance of stretchable organic electronic devices. Also, as the devices are deformed under service conditions, it is possible for cracks to grow. Furthermore, the multilayered structures of the devices can fail due to the delamination and buckling of the layered structures. There is, therefore, a need to study the failure mechanism in the layered structures that are relevant to stretchable organic electronic devices. Hence, in this study, a combined experimental, analytical and computational approach is used to study the effects of adhesion and deformation on the failure mechanisms in structures that are relevant to stretchable electronic devices. First, the failure mechanisms are studied in stretchable inorganic electronic structures. The wrinkles and buckles are formed by the unloading of pre-stretched PDMS/Au structure, after the evaporation of nano-scale Au layers. They are then characterized using atomic force microscopy and scanning electron microscopy. Analytical models are used to determine the critical stresses for wrinkling and buckling. The interfacial cracking and film buckling that can occur are also studied using finite element simulations. The implications of the results are then discussed for the potential applications of micro-wrinkles and micro-buckles in the stretchable electronic structures and biomedical devices. Subsequently, the adhesion between bi-material pairs that are relevant to organic light emitting devices, composite organic/inorganic light emitting devices, organic bulk heterojunction solar cells, and composite organic/inorganic solar cells on flexible substrates, is measured using force microscopy (AFM) techniques. The AFM measurements are incorporated into the Derjaguin-Muller-Toporov model to calculate the adhesion energies. The implications of the results are then discussed for the design of robust organic and composite organic/inorganic electronic devices. Finally, the lamination of organic solar cells and organic light emitting devices is studied using a combination of experimental, computational, and analytical approaches. First, the effects of applied lamination force (on contact between the laminated layers) are studied using experiments and models. The crack driving forces associated with the interfacial cracks that form at the interfaces between layers (at the bi-material interfaces) are estimated along with the critical interfacial crack driving forces associated with the separation of thin films, after layer transfer. The conditions for successful lamination are predicted using a combination of experiments and models. Guidelines are developed for the lamination of low-cost organic electronic structures.

Feeding inhibition in Corbicula fluminea (O.F. Muller, 1774) as an effect criterion to pollutant exposure: Perspectives for ecotoxicity screening and refinement of chemical control.

PubMed

Castro, Bruno Branco; Silva, Carlos; Macário, Inês Patrunilho Efe; Oliveira, Bruno; Gonçalves, Fernando; Pereira, Joana Luísa

2018-03-01

Bivalves are commonly used in biomonitoring programs to track pollutants. Several features, including its filter-feeding abilities, cumulatively argue in favour of the use of the Asian clam (Corbicula fluminea) as a biosentinel and an ecotoxicological model. Filtration in bivalves is very sensitive to external stimuli and its control is dictated by regulation of the opening/closure of the valves, which may be used as an avoidance defence against contaminants. Here, we investigate the filter-feeding behaviour of the Asian clam as an endpoint for assessing exposure to pollutants, driven by two complementary goals: (i) to generate relevant and sensitive toxicological information based on the ability of C. fluminea to clear an algal suspension, using the invasive species as a surrogate for native bivalves; (ii) to gain insight on the potential of exploring this integrative response in the refinement of chemical control methods for this pest. Clearance rates and proportion of algae removed were measured using a simple and reproducible protocol. Despite some variation across individuals and size classes, 50-90% of food particles were generally removed within 60-120 min by clams larger than 20 mm. Removal of algae was sensitive to an array of model contaminants with biocide potential, including fertilizers, pesticides, metals and salts: eight out of nine tested substances were detected at the μg l -1 or mg l -1 range and triggered valve closure, decreasing filter-feeding in a concentration-dependent manner. For most toxicants, a good agreement between mortality (96 h - LC 50 within the range 0.4-5500 mg l -1 ) and feeding (2 h - IC 50 within the range 0.005-2317 mg l -1 ) was observed, demonstrating that a 120-min assay can be used as a protective surrogate of acute toxicity. However, copper sulphate was very strongly avoided by the clams (IC 50  = 5.3 μg l -1 ); on the contrary, dichlorvos (an organophosphate insecticide) did not cause feeding depression, either by being undetected by the clams' chemosensors and/or by interfering with the valve closure mechanism. Such an assay has a large potential as a simple screening tool for industry, environmental agencies and managers. The ability of dichlorvos to bypass the Asian clam's avoidance strategy puts it in the spotlight as a potential agent to be used alone or combined with others in eradication programs of this biofouler in closed or semi-closed industrial settings. Copyright © 2018 Elsevier B.V. All rights reserved.

Higher-order Fourier analysis over finite fields and applications

NASA Astrophysics Data System (ADS)

Hatami, Pooya

Higher-order Fourier analysis is a powerful tool in the study of problems in additive and extremal combinatorics, for instance the study of arithmetic progressions in primes, where the traditional Fourier analysis comes short. In recent years, higher-order Fourier analysis has found multiple applications in computer science in fields such as property testing and coding theory. In this thesis, we develop new tools within this theory with several new applications such as a characterization theorem in algebraic property testing. One of our main contributions is a strong near-equidistribution result for regular collections of polynomials. The densities of small linear structures in subsets of Abelian groups can be expressed as certain analytic averages involving linear forms. Higher-order Fourier analysis examines such averages by approximating the indicator function of a subset by a function of bounded number of polynomials. Then, to approximate the average, it suffices to know the joint distribution of the polynomials applied to the linear forms. We prove a near-equidistribution theorem that describes these distributions for the group F(n/p) when p is a fixed prime. This fundamental fact was previously known only under various extra assumptions about the linear forms or the field size. We use this near-equidistribution theorem to settle a conjecture of Gowers and Wolf on the true complexity of systems of linear forms. Our next application is towards a characterization of testable algebraic properties. We prove that every locally characterized affine-invariant property of functions f : F(n/p) → R with n∈ N, is testable. In fact, we prove that any such property P is proximity-obliviously testable. More generally, we show that any affine-invariant property that is closed under subspace restrictions and has "bounded complexity" is testable. We also prove that any property that can be described as the property of decomposing into a known structure of low-degree polynomials is locally characterized and is, hence, testable. We discuss several notions of regularity which allow us to deduce algorithmic versions of various regularity lemmas for polynomials by Green and Tao and by Kaufman and Lovett. We show that our algorithmic regularity lemmas for polynomials imply algorithmic versions of several results relying on regularity, such as decoding Reed-Muller codes beyond the list decoding radius (for certain structured errors), and prescribed polynomial decompositions. Finally, motivated by the definition of Gowers norms, we investigate norms defined by different systems of linear forms. We give necessary conditions on the structure of systems of linear forms that define norms. We prove that such norms can be one of only two types, and assuming that |F p| is sufficiently large, they essentially are equivalent to either a Gowers norm or Lp norms.

INTRODUCTION: Anticipated changes in the global atmospheric water cycle

NASA Astrophysics Data System (ADS)

Allan, Richard P.; Liepert, Beate G.

2010-06-01

The atmospheric branch of the water cycle, although containing just a tiny fraction of the Earth's total water reserves, presents a crucial interface between the physical climate (such as large-scale rainfall patterns) and the ecosystems upon which human societies ultimately depend. Because of the central importance of water in the Earth system, the question of how the water cycle is changing, and how it may alter in future as a result of anthropogenic changes, present one of the greatest challenges of this century. The recent Intergovernmental Panel on Climate Change report on Climate Change and Water (Bates et al 2008) highlighted the increasingly strong evidence of change in the global water cycle and associated environmental consequences. It is of critical importance to climate prediction and adaptation strategies that key processes in the atmospheric water cycle are precisely understood and determined, from evaporation at the surface of the ocean, transport by the atmosphere, condensation as cloud and eventual precipitation, and run-off through rivers following interaction with the land surface, sub-surface, ice, snow and vegetation. The purpose of this special focus issue of Environmental Research Letters on anticipated changes in the global atmospheric water cycle is to consolidate the recent substantial advances in understanding past, present and future changes in the global water cycle through evidence built upon theoretical understanding, backed up by observations and borne out by climate model simulations. Thermodynamic rises in water vapour provide a central constraint, as discussed in a guest editorial by Bengtsson (2010). Theoretical implications of the Clausius-Clapeyron equation are presented by O'Gorman and Muller (2010) and with reference to a simple model (Sherwood 2010) while observed humidity changes confirm these anticipated responses at the land and ocean surface (Willett et al 2008). Rises in low-level moisture are thought to fuel an intensification of precipitation (O'Gorman and Schneider 2009) and analysis of observed and simulated changes in extreme rainfall for Europe (Lenderink and van Mijgaard 2008) and over tropical oceans by Allan et al (2010) appear to corroborate this. Radiative absorption by water vapour (Previdi 2010, Stephens and Ellis 2008) also provides a thermodynamic feedback on the water cycle, and explains why climate model projections of global precipitation and evaporation of around 1-3% K-1 are muted with respect to the expected 7% K-1 increases in low-level moisture. Climate models achieve dynamical responses through reductions in strength of the Walker circulation (Vecchi et al 2006) and small yet systematic changes in the atmospheric boundary layer over the ocean that modify evaporation (Richter and Xie 2008). A further consequence is anticipated sub-tropical drying (Neelin et al 2006, Chou et al 2007); Allan et al (2010) confirm a decline in dry sub-tropical precipitation while the wet regions become wetter both in model simulations and satellite-based observations. Discrepancies between observed and climate model simulated hydrological response to warming (Wentz et al 2007, Yu and Weller 2007) are of immediate concern in understanding and predicting future responses. Over decadal time-scales it is important to establish whether such discrepancies relate to the observing system, climate modeling deficiencies, or are a statistical artifact of the brevity of the satellite records (Liepert and Previdi 2009). Techniques for extracting information on century-scale changes in precipitation are emerging (Smith et al 2009) but are also subject to severe limitations. Past decadal-scale changes in the water cycle may be further influenced by regionally and temporally varying forcings and resulting feedbacks which must be represented realistically by models (Andrews et al 2009). The radiative impact of aerosols and their indirect effects on clouds and precipitation (Liepert et al 2004) provide an important example. Understanding surface solar 'dimming' and 'brightening' trends in the context of past and current changes in the water cycle are discussed in a guest editorial by Wild and Liepert (2010). The key roles anthropogenic aerosols can play on a regional scale are discussed by Lau et al (2010) through their study of the regional impact of absorbing aerosols on warming and snow melt over the Himalayas. The overarching goal of climate prediction is to provide reliable, probabilistic estimates of future changes. Relating hydrological responses back to a sound physical basis, the motivation for this special focus issue, is paramount in building confidence in anticipated changes, especially in the global water cycle. We are grateful to the reviewers and the journal editorial board for making this focus issue possible. Focus on Anticipated Changes in the Global Atmospheric Water Cycle Contents Editorials The global atmospheric water cycle Lennart Bengtsson The Earth radiation balance as driver of the global hydrological cycle Martin Wild and Beate Liepert Letters Enhanced surface warming and accelerated snow melt in the Himalayas and Tibetan Plateau induced by absorbing aerosols William K M Lau, Maeng-Ki Kim, Kyu-Myong Kim and Woo-Seop Lee Current changes in tropical precipitation Richard P Allan, Brian J Soden, Viju O John, William Ingram and Peter Good Direct versus indirect effects of tropospheric humidity changes on the hydrologic cycle S C Sherwood How closely do changes in surface and column water vapor follow Clausius-Clapeyron scaling in climate change simulations? P A O'Gorman and C J Muller Linking increases in hourly precipitation extremes to atmospheric temperature and moisture changes Geert Lenderink and Erik van Meijgaard Are climate-related changes to the character of global-mean precipitation predictable? Graeme L Stephens and Yongxiang Hu A comparison of large scale changes in surface humidity over land in observations and CMIP3 general circulation models Katharine M Willett, Philip D Jones, Peter W Thorne and Nathan P Gillett Radiative feedbacks on global precipitation Michael Previdi The transient response of global-mean precipitation to increasing carbon dioxide levels Timothy Andrews and Piers M Forster The observed sensitivity of the global hydrological cycle to changes in surface temperature Phillip A Arkin, Thomas M Smith, Mathew R P Sapiano and John Janowiak Precipitation changes within dynamical regimes in a perturbed climate Jonny Williams and Mark A Ringer

New gridded database of clear-sky solar radiation derived from ground-based observations over Europe

NASA Astrophysics Data System (ADS)

Bartok, Blanka; Wild, Martin; Sanchez-Lorenzo, Arturo; Hakuba, Maria Z.

2017-04-01

Since aerosols modify the entire energy balance of the climate system through different processes, assessments regarding aerosol multiannual variability are highly required by the climate modelling community. Because of the scarcity of long-term direct aerosol measurements, the retrieval of aerosol data/information from other type of observations or satellite measurements are very relevant. One approach frequently used in the literature is analyze of the clear-sky solar radiation which offer a better overview of changes in aerosol content. In the study first two empirical methods are elaborated in order to separate clear-sky situations from observed values of surface solar radiation available at the World Radiation Data Center (WRDC), St. Petersburg. The daily data has been checked for temporal homogeneity by applying the MASH method (Szentimrey, 2003). In the first approach, clear sky situations are detected based on clearness index, namely the ratio of the surface solar radiation to the extraterrestrial solar irradiation. In the second approach the observed values of surface solar radiation are compared to the climatology of clear-sky surface solar radiation calculated by the MAGIC radiation code (Muller et al. 2009). In both approaches the clear-sky radiation values highly depend on the applied thresholds. In order to eliminate this methodological error a verification of clear-sky detection is envisaged through a comparison with the values obtained by a high time resolution clear-sky detection and interpolation algorithm (Long and Ackermann, 2000) making use of the high quality data from the Baseline Surface Radiation Network (BSRN). As the consequences clear-sky data series are obtained for 118 European meteorological stations. Next a first attempt has been done in order to interpolate the point-wise clear-sky radiation data by applying the MISH (Meteorological Interpolation based on Surface Homogenized Data Basis) method for the spatial interpolation of surface meteorological elements developed at the Hungarian Meteorological Service (Szentimrey 2007). In this way new gridded database of clear-sky solar radiation is created suitable for further investigations regarding the role of aerosols in the energy budget, and also for validations of climate model outputs. References 1. Long CN, Ackerman TP. 2000. Identification of clear skies from broadband pyranometer measurements and calculation of downwelling shortwave cloud effects, J. Geophys. Res., 105(D12), 15609-15626, doi:10.1029/2000JD900077. 2. Mueller R, Matsoukas C, Gratzki A, Behr H, Hollmann R. 2009. The CM-SAF operational scheme for the satellite based retrieval of solar surface irradiance - a LUT based eigenvector hybrid approach, Remote Sensing of Environment, 113 (5), 1012-1024, doi:10.1016/j.rse.2009. 01.012 3. Szentimrey T. 2014. Multiple Analysis of Series for Homogenization (MASHv3.03), Hungarian Meteorological Service, https://www.met.hu/en/omsz/rendezvenyek/homogenization_and_interpolation/software/ 4. Szentimrey T. Bihari Z. 2014: Meteorological Interpolation based on Surface Homogenized Data Basis (MISHv1.03) https://www.met.hu/en/omsz/rendezvenyek/homogenization_and_interpolation/software/

Carbon limitation reveals allocation priority to defense compounds in peppermint

NASA Astrophysics Data System (ADS)

Forkelova, Lenka; Unsicker, Sybille; Forkel, Matthias; Huang, Jianbei; Trumbore, Susan; Hartmann, Henrik

2016-04-01

Studies of carbon partitioning during insect or pathogen infestation reveal high carbon investment into induced chemical defenses to deter the biotic agent (Baldwin, 1998). However, little is known how carbon investment into chemical defenses changes under abiotic stress such as drought. Drought forces plants to close their stomata to prevent water loss through transpiration while decreasing the amount of assimilated carbon. Furthermore drought hampers carbohydrates translocation due to declining plant hydration and reduced phloem functioning (McDowell, 2011; Hartmann et al., 2013; Sevanto, 2014). Hence long lasting drought can force plants into carbon starvation. The aim of our study was to disentangle carbon allocation priorities between growth, maintenance metabolism, storage and production of defense compounds under carbon limiting conditions using peppermint as our model plant. Drought is not the only method how to manipulate plant carbon metabolism and photosynthetic yield. Exposing plants to reduced [CO2] air is a promising tool simulating drought induced carbon limitation without affecting phloem functioning and so carbohydrate translocation (Hartmann et al., 2015). We exposed peppermint plants to drought (50% of the control irrigation) and to low [CO2] (progressive decrease from 350 ppm to 20 ppm) to disentangle hydraulic failure from carbon starvation effects on carbon allocation. Drought was applied as a cross-treatment yielding four treatments: watered and high [CO2] (W+CO2), drought and high [CO2] (D+CO2), water and low [CO2] (W-CO2), drought and low [CO2] (D-CO2). We analyzed the most abundant terpenoid defense compounds (α-Pinene, sabinene, myrcene, limonene, menthone, menthol and pulegone) and used continuous 13CO2 labelling to trace allocation pattern of new and old assimilated carbon in the four carbon sinks (structural biomass, water soluble sugars, starch and terpenoid defense compounds) in young expanding leaf tissue. This leaf tissue grew after the start of treatments and after the onset of the 13CO2 labelling. Under the control treatment (W+CO2) the relative proportion of new carbon in the four carbon sinks was very similar whereas under the three stress treatments (D+CO2, W-CO2, D-CO2) new carbon was preferentially invested into terpenoid defense compounds. This indicates that also under abiotic stress plants need to invest carbon into defense and so protect immature leaf tissue to secure long-term photosynthetic activity (Massad et al., 2014). Even though the concentration of water soluble sugars under both low [CO2] treatments dramatically dropped, concentration of terpenoid compounds correspondingly change only under the combination of drought and low [CO2] (D-CO2), which was the harshest treatment. Drought alone (D+CO2) caused high investment of old carbon and concentration increase of water soluble sugars as well as starch compared to other treatments. This carbohydrates increase could be explained by the use of water soluble sugars as osmoprotectants (Dichio et al.,2009) and by the fast growth decline as the main carbon sink (Muller et al., 2011).

Simulating Residential Demand in Singapore through Five Decades of Demographic Change

NASA Astrophysics Data System (ADS)

Davis, N. R.; Fernández, J.

2011-12-01

Singapore's rapid and well-documented development over the last half-century provides an ideal case for studying urban metabolism. Extensive data [1, 2] facilitate the modeling of historical dynamics of population and resource consumption. This paper presents an agent-based population model that simulates key demographic factors - number, size, and relative income of households - through fifty years of development in Singapore. This is the first step in a broader study linking demographic factors to residential demand for urban land, materials, water, and energy. Previous studies of the resource demands of housing stock have accounted for demographics by modifying the important population driver with a single, aggregated "lifestyle" term [3, 4]. However, demographic changes that result from development can influence the nature of the residential sector, and warrant a closer look. Increasing levels of education and affluence coupled with decreasing birth rates have yielded an aging population and changing family structures in Singapore [5]. These factors all contribute to an increasingly resource-intense residential sector. Singaporeans' elevated per capita income and life expectancy have created demand for larger household area, which means a growing percentage of available land must be dedicated to residential use [6]. While the majority of Singapore's housing is public - a strategy designed to maximize land use efficiency - residents are increasingly seeking private alternatives [7]. In the private sector, lower density housing puts even greater pressure on the finite supply of undeveloped land. Agent-based modeling is used to study the selected aspects of demography. The population is disaggregated into historical time-series distributions of age, family size, education, and income. We propose a simplified methodology correlating average education level with birth rate, and income to categorize households and establish housing unit demand. Aggregated lifestyle variables have proven useful for simulating past resource consumption in some cases, but demographic shifts are important causal factors in future demand that would not be captured by these simple terms. For this reason disaggregated population modeling provides better insight into the size and income distributions of households that ultimately drive residential resource consumption. References [1] Yearbook of Statistics Singapore. Dept. of Statistics, Ministry of Trade & Industry, 1960-2011. [2] HDB Annual Report. Housing & Development Board, Ministry of National Development, 1960-2011. [3] B. Muller, "Stock dynamics for forecasting material flows-case study for housing in the Netherlands," Ecol Econ, vol. 59, no. 1, pp. 142-156, 2006. [4] H. Bergsdal, et al., "Dynamic material flow analysis for Norway's dwelling stock," Build Res Inf, vol. 35, no. 5, pp. 557-570, 2007. [5] D. Phillips and H. Bartlett, "Aging trends-Singapore," J Cross Cult Gerontol, vol. 10, no. 4, pp. 349-356, 1995. [6] T. Wong and A. Yap, Four decades of transformation: Land use in Singapore, 1960-2000. Eastern University Press, 2004. [7] -, "From universal public housing to meeting the increasing aspiration for private housing in Singapore," Habitat Int, vol. 27, no. 3, pp. 361-380, 2003.

Calcium Carbonate Crystal Growth in Porous Media, in the presence of Water Miscible and Non-Miscible Organic Fluids

NASA Astrophysics Data System (ADS)

Jaho, Sofia; Sygouni, Varvara; Paraskeva, Christakis A.

2015-04-01

The deposition of sparingly soluble salts (scaling) within porous media is a major problem encountered in many industrial and environmental applications. In the oil industry scaling causes severe operational malfunctions and, therefore, increasing the total operating and maintenance cost [1]. The most common types of sparingly soluble salts located in oil fields include carbonate and sulfate salts of calcium, strondium and barium[1,2]. Multiple phase flow and tubing surface properties are some of the factors affecting scale formation [3]. The main purpose of the present work was the investigation of the precipitation mechanisms of calcium carbonate (CaCO3) through in situ mixing of two soluble salt solutions in a flow granular medium, in the presence of water miscible organic fluid (ethylene glycol) or non-miscible organic fluid (n-dodecane). All series of experiments were carried out in a two dimensional porous medium made of Plexiglas. For all solutions used in the experiments, the contact angles with the surface of the porous medium and the interfacial tensions were measured. During the experiments, the calcium carbonate crystal growth was continuously monitored and recorded through an optical microscope equipped with a digital programmed video camera. The snap-shots were taken within specific time intervals and their detailed procession gave information concerning the crystal growth rate and kinetics. The pH of the effluent was measured and fluids samples were collected for calcium analysis using Atomic Absorption Spectroscopy (AAS). In all experiments effluent calcium concentration decreased as a function of time, suggesting that CaCO3 precipitation took place inside the porous medium. Crystals of the precipitated salt were identified using Infrared Spectroscopy (IR) and the morphology of the crystals was examined using Scanning Electron Microscopy (SEM). The induction time for precipitation of CaCO3 crystals in the presence of n-dodecane was significantly reduced compared to the induction time where no oil phase was present. The interface of n-dodecane and supersaturated solutions seems to be very active and favored the formation of the CaCO3 crystalline enhancing the heterogeneous nucleation which generally demands a decreased energy barrier. Acknowledgments This research was partially funded by the European Union (European Social Fund-ESF) and Greek National Funds through the Operational Program "Education and Lifelong Learning" under the action Aristeia II (Code No4420). References 1. Merdhah A. B. and Yassin A. A., Scale formation in oil reservoir during water injection at high-salinity formation water, Journal of Applied Sciences, 7, 3198-3207 (2007). 2. Moghadasi J., Muller-Steinhagen H., Jamialahmadi M. and Sharif A., Model study on the kinetics of oil field formation damage due to salt precipitation from injection, Journal of Petroleum Science and Engineering, 43, 201-217 (2004). 3. Nancollas G. H. and Reddy M. M., The crystallization of calcium carbonate II. Calcite growth mechanism, Journal of Colloid and Interface Science, 37, 824-830 (1971).