Transport processes of the legume symbiosome membrane

PubMed Central

Clarke, Victoria C.; Loughlin, Patrick C.; Day, David A.; Smith, Penelope M. C.

2014-01-01

The symbiosome membrane (SM) is a physical barrier between the host plant and nitrogen-fixing bacteria in the legume:rhizobia symbiosis, and represents a regulated interface for the movement of solutes between the symbionts that is under plant control. The primary nutrient exchange across the SM is the transport of a carbon energy source from plant to bacteroid in exchange for fixed nitrogen. At a biochemical level two channels have been implicated in movement of fixed nitrogen across the SM and a uniporter that transports monovalent dicarboxylate ions has been characterized that would transport fixed carbon. The aquaporin NOD26 may provide a channel for ammonia, but the genes encoding the other transporters have not been identified. Transport of several other solutes, including calcium and potassium, have been demonstrated in isolated symbiosomes, and genes encoding transport systems for the movement of iron, nitrate, sulfate, and zinc in nodules have been identified. However, definitively matching transport activities with these genes has proved difficult and many further transport processes are expected on the SM to facilitate the movement of nutrients between the symbionts. Recently, work detailing the SM proteome in soybean has been completed, contributing significantly to the database of known SM proteins. This represents a valuable resource for the identification of transporter protein candidates, some of which may correspond to transport processes previously described, or to novel transport systems in the symbiosis. Putative transporters identified from the proteome include homologs of transporters of sulfate, calcium, peptides, and various metal ions. Here we review current knowledge of transport processes of the SM and discuss the requirements for additional transport routes of other nutrients exchanged in the symbiosis, with a focus on transport systems identified through the soybean SM proteome. PMID:25566274

Wildfire Effects on In-stream Nutrient Processing and Hydrologic Transport

NASA Astrophysics Data System (ADS)

Rhea, A.; Covino, T. P.; Rhoades, C.; Fegel, T.

2017-12-01

In many forests throughout the Western U.S., drought, climate change, and growing fuel loads are contributing to increased fire frequency and severity. Wildfires can influence watershed nutrient retention as they fundamentally alter the biological composition and physical structure in upland landscapes, riparian corridors, and stream channels. While numerous studies have documented substantial short-term increases in stream nutrient concentrations and export (particularly reactive nitrogen, N) following forest fires, the long-term implications for watershed nutrient cycling remain unclear. For example, recent work indicates that nitrate concentrations and export can remain elevated for a decade or more following wildfire, yet the controls on these processes are unknown. In this research, we use empirical observations from nutrient tracer injections, nutrient diffusing substrates, and continuous water quality monitoring to isolate biological and physical controls on nutrient export across a burn-severity gradient. Tracer results demonstrate substantial stream-groundwater exchange, but little biological nutrient uptake in burned streams. This in part explains patterns of elevated nutrient export. Paired nutrient diffusing substrate experiments allow us to further investigate shifts in N, phosphorus, and carbon limitation that may suppress post-fire stream nutrient uptake. By isolating the mechanisms that reduce the capacity of fire-affected streams to retain and transform nutrient inputs, we can better predict dynamics in post-fire water quality and help prioritize upland and riparian restoration.

The placenta. Not just a conduit for maternal fuels.

PubMed

Hay, W W

1991-12-01

The placenta is a specialized organ of exchange that provides nutrients to and excretes waste products from the fetus. The exchange of nutrients between placenta and fetus involves three major mechanisms: 1) direct transfer of nutrients from the maternal to the fetal plasma, 2) placental consumption of nutrients, and 3) placental conversion of nutrients to alternate substrate forms. Although direct transfer has been considered the primary means by which placental-fetal exchange controls the supply of nutrients to the fetus and thereby fetal metabolism and growth, the considerable metabolic activity of the placenta provides a large and fundamentally important contribution to both the quality and quantity of nutrient substrates supplied to the fetus; e.g., placental O2 and glucose consumption rates approach or even exceed those of brain and tumor tissue. Other placental metabolic activities include glycolysis, gluconeogenesis, glycogenesis, oxidation, protein synthesis, amino acid interconversion, triglyceride synthesis, and chain lengthening or shortening of individual fatty acids. Thus, consideration of the metabolism of the placenta is essential for a more complete understanding of how the placenta regulates nutrient transfer to the fetus, fetal energy balance, and fetal growth.

Dynamics of nutrient cycling and related benthic nutrient and oxygen fluxes during a spring phytoplankton bloom in South San Francisco Bay (USA)

USGS Publications Warehouse

Grenz, C.; Cloern, J.E.; Hager, S.W.; Cole, B.E.

2000-01-01

Benthic oxygen uptake and nutrient releases of N, P and Si were measured weekly at 2 sites in South San Francisco Bay around the 1996 spring bloom. Exchanges across the sediment-water interface were estimated from whole core incubations performed in the laboratory at in situ temperature and in dark. Fluxes changed significantly on a weekly time scale. Over a period of 15 wk the fluxes of dissolved inorganic N, P and Si ranged from -40 to +200, 0 to 13 and from 30 to 400 ??mol m-2 h-1 respectively. Sediment oxygen demand increased from 10 before to 64 mg O2 m-2 h-1 just after the bloom period. During the bloom, nutrient fluxes represented about 20, 16 and 9% of the Si, P and N requirements for primary production. Before and after the bloom period, Si fluxes contributed up to 30 and > 100% of this requirement and P and N fluxes up to 15 and 50% respectively. Simple empirical models explain most of the spatial-temporal variability of benthic fluxes of Si, P and NH4 (but not NO3) from 3 predictor variables: sediment porosity, nutrient concentration in bottom waters and chlorophyll content of surficial sediments. These models show that algal blooms influence benthic-pelagic nutrient exchange through 2 processes: (1) depletion of nutrients from the water column (which enhances gradient-driven transports across the sediment-water interface) and (2) sedimentation of labile phytodetritus (which promotes remineralization in or on the surficial sediments). Rates and patterns of nutrient cycling were very different at the shallow and deep study sites, illustrating the challenge of extrapolating measurements of coupled algae-nutrient dynamics to whole ecosystems.

Comparison of ion-exchange resin counterions in the nutrient measurement of calcareous soils: implications for correlative studies of plant-soil relationships

USGS Publications Warehouse

Sherrod, S.K.; Belnap, Jayne; Miller, M.E.

2003-01-01

For more than 40 years, ion-exchange resins have been used to characterize nutrient bioavailability in terrestrial and aquatic ecosystems. To date, however, no standardized methodology has been developed, particularly with respect to the counterions that initially occupy resin exchange sites. To determine whether different resin counterions yield different measures of soil nutrients and rank soils differently with respect to their measured nutrient bioavailability, we compared nutrient measurements by three common counterion combinations (HCl, HOH, and NaHCO3). Five sandy calcareous soils were chosen to represent a range of soil characteristics at Canyonlands National Park, Utah, and resin capsules charged with the different counterions equilibrated in saturated pastes of these soils for one week. Data were converted to proportions of total ions of corresponding charge for ANOVA. Results from the different methods were not comparable with respect to any nutrient. Of eleven nutrients measured, all but iron (Fe2+), manganese (Mn2+), and zinc (Zn2+) differed significantly (pa??0.05) as a function of soilcounterion interactions; Fe2+ and Zn2+ varied as functions of counterion alone. Of the counterion combinations, HCl-resins yielded the most net ion exchange with all measured nutrients except Na+, and the three of which desorbed in the greatest quantities from HOH-resins. Conventional chemical extractions using ammonium acetate generally yielded high proportional values of Ca2+, K+, and Na+. Further, among-soil rankings of nutrient bioavailability varied widely among methods. This study highlights the fact that various ion-exchange resin techniques for measuring soil nutrients may have differential effects on the soil-resin environment and yield data that should not be compared nor considered interchangeable. The most appropriate methods for characterizing soil-nutrient bioavailability depends on soil characteristics and likely on the physiological uptake mechanisms of plants or functional groups of interest. The effects of different extraction techniques on nutrient measures should be understood before selecting an extraction method. For example, in the calcareous soils used for this experiment, nutrient extraction methods that alter soil carbonates through dissolution or precipitation could compromise the accurate measurement of plant-available nutrients. The implications of this study emphasize the universal importance of understanding the differential effects of alternate methods on soil chemistry.

Comparison of ion-exchange resin counterions in the nutrient measurement of calcareous soils: Implications for correlative studies of plant-soil relationships

USGS Publications Warehouse

Sherrod, S.K.; Belnap, J.; Miller, M.E.

2003-01-01

For more than 40 years, ion-exchange resins have been used to characterize nutrient bioavailability in terrestrial and aquatic ecosystems. To date, however, no standardized methodology has been developed, particularly with respect to the counterions that initially occupy resin exchange sites. To determine whether different resin counterions yield different measures of soil nutrients and rank soils differently with respect to their measured nutrient bioavailability, we compared nutrient measurements by three common counterion combinations (HCl, HOH, and NaHCO3). Five sandy calcareous soils were chosen to represent a range of soil characteristics at Canyonlands National Park, Utah, and resin capsules charged with the different counterions equilibrated in saturated pastes of these soils for one week. Data were converted to proportions of total ions of corresponding charge for ANOVA. Results from the different methods were not comparable with respect to any nutrient. Of eleven nutrients measured, all but iron (Fe2+), manganese (Mn2+), and zinc (Zn2+) differed significantly (p ??? 0.05) as a function of soil x counterion interactions; Fe2+ and Zn2+ varied as functions of counterion alone. Of the counterion combinations, HCl-resins yielded the most net ion exchange with all measured nutrients except Na+, NH4+, and HPO42-, the three of which desorbed in the greatest quantities from HOH-resins. Conventional chemical extractions using ammonium acetate generally yielded high proportional values of Ca2+, K+, and Na+. Further, among-soil rankings of nutrient bioavailability varied widely among methods. This study highlights the fact that various ion-exchange resin techniques for measuring soil nutrients may have differential effects on the soil-resin environment and yield data that should not be compared nor considered interchangeable. The most appropriate methods for characterizing soil-nutrient bioavailability depends on soil characteristics and likely on the physiological uptake mechanisms of plants or functional groups of interest. The effects of different extraction techniques on nutrient measures should be understood before selecting an extraction method. For example, in the calcareous soils used for this experiment, nutrient extraction methods that alter soil carbonates through dissolution or precipitation could compromise the accurate measurement of plant-available nutrients. The implications of this study emphasize the universal importance of understanding the differential effects of alternate methods on soil chemistry.

Tracing Cationic Nutrients from Xylem into Stem Tissue of French Bean by Stable Isotope Tracers and Cryo-Secondary Ion Mass Spectrometry[W][OA

PubMed Central

Metzner, Ralf; Schneider, Heike Ursula; Breuer, Uwe; Thorpe, Michael Robert; Schurr, Ulrich; Schroeder, Walter Heinz

2010-01-01

Fluxes of mineral nutrients in the xylem are strongly influenced by interactions with the surrounding stem tissues and are probably regulated by them. Toward a mechanistic understanding of these interactions, we applied stable isotope tracers of magnesium, potassium, and calcium continuously to the transpiration stream of cut bean (Phaseolus vulgaris) shoots to study their radial exchange at the cell and tissue level with stem tissues between pith and phloem. For isotope localization, we combined sample preparation with secondary ion mass spectrometry in a completely cryogenic workflow. After 20 min of application, tracers were readily detectable to various degrees in all tissues. The xylem parenchyma near the vessels exchanged freely with the vessels, its nutrient elements reaching a steady state of strong exchange with elements in the vessels within 20 min, mainly via apoplastic pathways. A slow exchange between vessels and cambium and phloem suggested that they are separated from the xylem, parenchyma, and pith, possibly by an apoplastic barrier to diffusion for nutrients (as for carbohydrates). There was little difference in these distributions when tracers were applied directly to intact xylem via a microcapillary, suggesting that xylem tension had little effect on radial exchange of these nutrients and that their movement was mainly diffusive. PMID:19965970

Cooperation through Competition-Dynamics and Microeconomics of a Minimal Nutrient Trade System in Arbuscular Mycorrhizal Symbiosis.

PubMed

Schott, Stephan; Valdebenito, Braulio; Bustos, Daniel; Gomez-Porras, Judith L; Sharma, Tripti; Dreyer, Ingo

2016-01-01

In arbuscular mycorrhizal (AM) symbiosis, fungi and plants exchange nutrients (sugars and phosphate, for instance) for reciprocal benefit. Until now it is not clear how this nutrient exchange system works. Here, we used computational cell biology to simulate the dynamics of a network of proton pumps and proton-coupled transporters that are upregulated during AM formation. We show that this minimal network is sufficient to describe accurately and realistically the nutrient trade system. By applying basic principles of microeconomics, we link the biophysics of transmembrane nutrient transport with the ecology of organismic interactions and straightforwardly explain macroscopic scenarios of the relations between plant and AM fungus. This computational cell biology study allows drawing far reaching hypotheses about the mechanism and the regulation of nutrient exchange and proposes that the "cooperation" between plant and fungus can be in fact the result of a competition between both for the same resources in the tiny periarbuscular space. The minimal model presented here may serve as benchmark to evaluate in future the performance of more complex models of AM nutrient exchange. As a first step toward this goal, we included SWEET sugar transporters in the model and show that their co-occurrence with proton-coupled sugar transporters results in a futile carbon cycle at the plant plasma membrane proposing that two different pathways for the same substrate should not be active at the same time.

Soil nutrient-landscape relationships in a lowland tropical rainforest in Panama

USGS Publications Warehouse

Barthold, F.K.; Stallard, R.F.; Elsenbeer, H.

2008-01-01

Soils play a crucial role in biogeochemical cycles as spatially distributed sources and sinks of nutrients. Any spatial patterns depend on soil forming processes, our understanding of which is still limited, especially in regards to tropical rainforests. The objective of our study was to investigate the effects of landscape properties, with an emphasis on the geometry of the land surface, on the spatial heterogeneity of soil chemical properties, and to test the suitability of soil-landscape modeling as an appropriate technique to predict the spatial variability of exchangeable K and Mg in a humid tropical forest in Panama. We used a design-based, stratified sampling scheme to collect soil samples at 108 sites on Barro Colorado Island, Panama. Stratifying variables are lithology, vegetation and topography. Topographic variables were generated from high-resolution digital elevation models with a grid size of 5 m. We took samples from five depths down to 1 m, and analyzed for total and exchangeable K and Mg. We used simple explorative data analysis techniques to elucidate the importance of lithology for soil total and exchangeable K and Mg. Classification and Regression Trees (CART) were adopted to investigate importance of topography, lithology and vegetation for the spatial distribution of exchangeable K and Mg and with the intention to develop models that regionalize the point observations using digital terrain data as explanatory variables. Our results suggest that topography and vegetation do not control the spatial distribution of the selected soil chemical properties at a landscape scale and lithology is important to some degree. Exchangeable K is distributed equally across the study area indicating that other than landscape processes, e.g. biogeochemical processes, are responsible for its spatial distribution. Lithology contributes to the spatial variation of exchangeable Mg but controlling variables could not be detected. The spatial variation of soil total K and Mg is mainly influenced by lithology. ?? 2007 Elsevier B.V. All rights reserved.

Cumulative Significance of Hyporheic Exchange and Biogeochemical Processing in River Networks

NASA Astrophysics Data System (ADS)

Harvey, J. W.; Gomez-Velez, J. D.

2014-12-01

Biogeochemical reactions in rivers that decrease excessive loads of nutrients, metals, organic compounds, etc. are enhanced by hydrologic interactions with microbially and geochemically active sediments of the hyporheic zone. The significance of reactions in individual hyporheic flow paths has been shown to be controlled by the contact time between river water and sediment and the intrinsic reaction rate in the sediment. However, little is known about how the cumulative effects of hyporheic processing in large river basins. We used the river network model NEXSS (Gomez-Velez and Harvey, submitted) to simulate hyporheic exchange through synthetic river networks based on the best available models of network topology, hydraulic geometry and scaling of geomorphic features, grain size, hydraulic conductivity, and intrinsic reaction rates of nutrients and metals in river sediment. The dimensionless reaction significance factor, RSF (Harvey et al., 2013) was used to quantify the cumulative removal fraction of a reactive solute by hyporheic processing. SF scales reaction progress in a single pass through the hyporheic zone with the proportion of stream discharge passing through the hyporheic zone for a specified distance. Reaction progress is optimal where the intrinsic reaction timescale in sediment matches the residence time of hyporheic flow and is less efficient in longer residence time hyporheic flow as a result of the decreasing proportion of river flow that is processed by longer residence time hyporheic flow paths. In contrast, higher fluxes through short residence time hyporheic flow paths may be inefficient because of the repeated surface-subsurface exchanges required to complete the reaction. Using NEXSS we found that reaction efficiency may be high in both small streams and large rivers, although for different reasons. In small streams reaction progress generally is dominated by faster pathways of vertical exchange beneath submerged bedforms. Slower exchange beneath meandering river banks mainly has importance only in large rivers. For solutes entering networks in proportion to water inputs it is the lower order streams that tend to dominate cumulative reaction progress.

Cooperation through Competition—Dynamics and Microeconomics of a Minimal Nutrient Trade System in Arbuscular Mycorrhizal Symbiosis

PubMed Central

Schott, Stephan; Valdebenito, Braulio; Bustos, Daniel; Gomez-Porras, Judith L.; Sharma, Tripti; Dreyer, Ingo

2016-01-01

In arbuscular mycorrhizal (AM) symbiosis, fungi and plants exchange nutrients (sugars and phosphate, for instance) for reciprocal benefit. Until now it is not clear how this nutrient exchange system works. Here, we used computational cell biology to simulate the dynamics of a network of proton pumps and proton-coupled transporters that are upregulated during AM formation. We show that this minimal network is sufficient to describe accurately and realistically the nutrient trade system. By applying basic principles of microeconomics, we link the biophysics of transmembrane nutrient transport with the ecology of organismic interactions and straightforwardly explain macroscopic scenarios of the relations between plant and AM fungus. This computational cell biology study allows drawing far reaching hypotheses about the mechanism and the regulation of nutrient exchange and proposes that the “cooperation” between plant and fungus can be in fact the result of a competition between both for the same resources in the tiny periarbuscular space. The minimal model presented here may serve as benchmark to evaluate in future the performance of more complex models of AM nutrient exchange. As a first step toward this goal, we included SWEET sugar transporters in the model and show that their co-occurrence with proton-coupled sugar transporters results in a futile carbon cycle at the plant plasma membrane proposing that two different pathways for the same substrate should not be active at the same time. PMID:27446142

Energy efficient reconcentration of diluted human urine using ion exchange membranes in bioelectrochemical systems.

PubMed

Tice, Ryan C; Kim, Younggy

2014-11-01

Nutrients can be recovered from source separated human urine; however, nutrient reconcentration (i.e., volume reduction of collected urine) requires energy-intensive treatment processes, making it practically difficult to utilize human urine. In this study, energy-efficient nutrient reconcentration was demonstrated using ion exchange membranes (IEMs) in a microbial electrolysis cell (MEC) where substrate oxidation at the MEC anode provides energy for the separation of nutrient ions (e.g., NH4(+), HPO4(2-)). The rate of nutrient separation was magnified with increasing number of IEM pairs and electric voltage application (Eap). Ammonia and phosphate were reconcentrated from diluted human urine by a factor of up to 4.5 and 3.0, respectively (Eap = 1.2 V; 3-IEM pairs). The concentrating factor increased with increasing degrees of volume reduction, but it remained stationary when the volume ratio between the diluate (urine solution that is diluted in the IEM stack) and concentrate (urine solution that is reconcentrated) was 6 or greater. The energy requirement normalized by the mass of nutrient reconcentrated was 6.48 MJ/kg-N (1.80 kWh/kg-N) and 117.6 MJ/kg-P (32.7 kWh/kg-P). In addition to nutrient separation, the examined MEC reactor with three IEM pairs showed 54% removal of COD (chemical oxygen demand) in 47-hr batch operation. The high sulfate concentration in human urine resulted in substantial growth of both of acetate-oxidizing and H2-oxidizing sulfate reducing bacteria, greatly diminishing the energy recovery and Coulombic efficiency. However, the high microbial activity of sulfate reducing bacteria hardly affected the rate of nutrient reconcentration. With the capability to reconcentrate nutrients at a minimal energy consumption and simultaneous COD removal, the examined bioelectrochemical treatment method with an IEM application has a potential for practical nutrient recovery and sustainable treatment of source-separated human urine. Copyright © 2014 Elsevier Ltd. All rights reserved.

FISH-MEDIATED NUTRIENT AND ENERGY EXCHANGE BETWEEN A LAKE SUPERIOR COASTAL WETLAND AND ITS ADJACENT BAY

EPA Science Inventory

Little has been done to quantify fluxes of organisms, nutrients, and energy between freshwater coastal habitats and adjacent offshore waters or to evaluate the ecological implications of these exchanges on a whole-lake basis. To test the hypothesis that fish-mediated transport m...

Evidence for self-organization in determining spatial patterns of stream nutrients, despite primacy of the geomorphic template

PubMed Central

Dong, Xiaoli; Grimm, Nancy B.

2017-01-01

Nutrients in freshwater ecosystems are highly variable in space and time. Nevertheless, the variety of processes contributing to nutrient patchiness, and the wide range of spatial and temporal scales at which these processes operate, obfuscate how this spatial heterogeneity is generated. Here, we describe the spatial structure of stream nutrient concentration, quantify the relative importance of the physical template and biological processes, and detect and evaluate the role of self-organization in driving such patterns. We examined nutrient spatial patterns in Sycamore Creek, an intermittent desert stream in Arizona that experienced an ecosystem regime shift [from a gravel/algae-dominated to a vascular plant-dominated (hereafter, “wetland”) system] in 2000 when cattle grazing ceased. We conducted high-resolution nutrient surveys in surface water along a 10-km stream reach over four visits spanning 18 y (1995–2013) that represent different successional stages and prewetland stage vs. postwetland state. As expected, groundwater upwelling had a major influence on nutrient spatial patterns. However, self-organization realized by the mechanism of spatial feedbacks also was significant and intensified over ecosystem succession, as a resource (nitrogen) became increasingly limiting. By late succession, the effects of internal spatial feedbacks and groundwater upwelling were approximately equal in magnitude. Wetland establishment influenced nutrient spatial patterns only indirectly, by modifying the extent of surface water/groundwater exchange. This study illustrates that multiple mechanisms interact in a dynamic way to create spatial heterogeneity in riverine ecosystems, and provides a means to detect spatial self-organization against physical template heterogeneity as a dominant driver of spatial patterns. PMID:28559326

Evidence for self-organization in determining spatial patterns of stream nutrients, despite primacy of the geomorphic template.

PubMed

Dong, Xiaoli; Ruhí, Albert; Grimm, Nancy B

2017-06-13

Nutrients in freshwater ecosystems are highly variable in space and time. Nevertheless, the variety of processes contributing to nutrient patchiness, and the wide range of spatial and temporal scales at which these processes operate, obfuscate how this spatial heterogeneity is generated. Here, we describe the spatial structure of stream nutrient concentration, quantify the relative importance of the physical template and biological processes, and detect and evaluate the role of self-organization in driving such patterns. We examined nutrient spatial patterns in Sycamore Creek, an intermittent desert stream in Arizona that experienced an ecosystem regime shift [from a gravel/algae-dominated to a vascular plant-dominated (hereafter, "wetland") system] in 2000 when cattle grazing ceased. We conducted high-resolution nutrient surveys in surface water along a 10-km stream reach over four visits spanning 18 y (1995-2013) that represent different successional stages and prewetland stage vs. postwetland state. As expected, groundwater upwelling had a major influence on nutrient spatial patterns. However, self-organization realized by the mechanism of spatial feedbacks also was significant and intensified over ecosystem succession, as a resource (nitrogen) became increasingly limiting. By late succession, the effects of internal spatial feedbacks and groundwater upwelling were approximately equal in magnitude. Wetland establishment influenced nutrient spatial patterns only indirectly, by modifying the extent of surface water/groundwater exchange. This study illustrates that multiple mechanisms interact in a dynamic way to create spatial heterogeneity in riverine ecosystems, and provides a means to detect spatial self-organization against physical template heterogeneity as a dominant driver of spatial patterns.

A gradient of nutrient enrichment reveals nonlinear impacts of fertilization on Arctic plant diversity and ecosystem function.

PubMed

Prager, Case M; Naeem, Shahid; Boelman, Natalie T; Eitel, Jan U H; Greaves, Heather E; Heskel, Mary A; Magney, Troy S; Menge, Duncan N L; Vierling, Lee A; Griffin, Kevin L

2017-04-01

Rapid environmental change at high latitudes is predicted to greatly alter the diversity, structure, and function of plant communities, resulting in changes in the pools and fluxes of nutrients. In Arctic tundra, increased nitrogen (N) and phosphorus (P) availability accompanying warming is known to impact plant diversity and ecosystem function; however, to date, most studies examining Arctic nutrient enrichment focus on the impact of relatively large (>25x estimated naturally occurring N enrichment) doses of nutrients on plant community composition and net primary productivity. To understand the impacts of Arctic nutrient enrichment, we examined plant community composition and the capacity for ecosystem function (net ecosystem exchange, ecosystem respiration, and gross primary production) across a gradient of experimental N and P addition expected to more closely approximate warming-induced fertilization. In addition, we compared our measured ecosystem CO 2 flux data to a widely used Arctic ecosystem exchange model to investigate the ability to predict the capacity for CO 2 exchange with nutrient addition. We observed declines in abundance-weighted plant diversity at low levels of nutrient enrichment, but species richness and the capacity for ecosystem carbon uptake did not change until the highest level of fertilization. When we compared our measured data to the model, we found that the model explained roughly 30%-50% of the variance in the observed data, depending on the flux variable, and the relationship weakened at high levels of enrichment. Our results suggest that while a relatively small amount of nutrient enrichment impacts plant diversity, only relatively large levels of fertilization-over an order of magnitude or more than warming-induced rates-significantly alter the capacity for tundra CO 2 exchange. Overall, our findings highlight the value of measuring and modeling the impacts of a nutrient enrichment gradient, as warming-related nutrient availability may impact ecosystems differently than single-level fertilization experiments.

Hyporheic Passive Flux Meters Reveal Inverse Vertical Zonation and High Seasonality of Nitrogen Processing in an Anthropogenically Modified Stream (Holtemme, Germany)

NASA Astrophysics Data System (ADS)

Kunz, Julia Vanessa; Annable, Michael D.; Rao, Suresh; Rode, Michael; Borchardt, Dietrich

2017-12-01

Transformation and retention of nitrogen and other biologically reactive solutes in the hyporheic zones of running water contribute to an essential ecosystem service. However, the synoptic impact of intense agricultural or urban land-uses, elevated nutrient loading, flow alterations, riparian clear-cutting, and channelization on the source-sink behavior of solutes in hyporheic zones remains largely uncharacterized and unquantified. Therefore, we studied nutrient dynamics in a hydromorphologically and chemically modified stream reach using a new monitoring approach allowing the simultaneous measurement of nutrient and water flux through a screened area in the subsurface of rivers (hyporheic passive flux meter, HPFM). With HPFMs we directly assessed time-integrated lateral hyporheic nitrate fluxes during early spring and midsummer covering different temperature and discharge regimes. Contrary to our expectations, higher stream discharge coincided with substantially lower hyporheic exchange rates. While in streams featuring a natural morphology, bed form induced exchange commonly increases with surface flow, the influence of groundwater level was dominant in this reach. Furthermore, in contrast to less impacted environments, where progressive substrate depletion with depths reduces metabolic rates in the subsurface, we identified not the upper, but the intermediate layer of the hyporheic zone as hot spot of nutrient turnover. Overall, the hyporheic zone at the study site functioned partly as nitrate source, partly as a sink. Neither of the commonly used determinants redox state and residence time could explain this source or sink function. Our results give clear evidence to carefully transfer the knowledge of hyporheic zone processes from "natural" systems to anthropologically modified streams.

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools

PubMed Central

Garcia-Robledo, Emilio; Bohorquez, Julio; Corzo, Alfonso; Jimenez-Arias, Juan L.; Papaspyrou, Sokratis

2016-01-01

The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), highlighting the biogeochemical importance of this nutrient pool. Storing nutrients could support the growth of autotrophs when nutrients are not available, and could also provide alternative electron acceptors for dissimilatory processes such as nitrate reduction. Here, we studied the magnitude and relative importance of these three nutrient pools (PW, IC, and EX) and their relation to chlorophylls (used as a proxy for MPB abundance) and organic matter (OM) contents in an intertidal mudflat of Cadiz Bay (Spain). MPB was localized in the first 4 mm of the sediment and showed a clear seasonal pattern; highest chlorophylls content was found during autumn and lowest during spring-summer. The temporal and spatial distribution of nutrients pools and MPB were largely correlated. Ammonium was higher in the IC and EX fractions, representing on average 59 and 37% of the total ammonium pool, respectively. Similarly, phosphate in the IC and EX fractions accounted on average for 40 and 31% of the total phosphate pool, respectively. Nitrate in the PW was low, suggesting low nitrification activity and rapid consumption. Nitrate accumulated in the IC pool during periods of moderate MPB abundance, being up to 66% of the total nitrate pool, whereas it decreased when chlorophyll concentration peaked likely due to a high nitrogen demand. EX-Nitrate accounted for the largest fraction of total sediment nitrate, 66% on average. The distribution of EX-Nitrate was significantly correlated with chlorophyll and OM, which probably indicates a relation of this pool to an increased availability of sites for ionic adsorption. This EX-Nitrate pool could represent an alternative nitrate source with significant concentrations available to the microbial community, deeper in the sediment below the oxic layer. PMID:27303370

Dynamics of Inorganic Nutrients in Intertidal Sediments: Porewater, Exchangeable, and Intracellular Pools.

PubMed

Garcia-Robledo, Emilio; Bohorquez, Julio; Corzo, Alfonso; Jimenez-Arias, Juan L; Papaspyrou, Sokratis

2016-01-01

The study of inorganic nutrients dynamics in shallow sediments usually focuses on two main pools: porewater (PW) nutrients and exchangeable (EX) ammonium and phosphate. Recently, it has been found that microphytobenthos (MPB) and other microorganisms can accumulate large amounts of nutrients intracellularly (IC), highlighting the biogeochemical importance of this nutrient pool. Storing nutrients could support the growth of autotrophs when nutrients are not available, and could also provide alternative electron acceptors for dissimilatory processes such as nitrate reduction. Here, we studied the magnitude and relative importance of these three nutrient pools (PW, IC, and EX) and their relation to chlorophylls (used as a proxy for MPB abundance) and organic matter (OM) contents in an intertidal mudflat of Cadiz Bay (Spain). MPB was localized in the first 4 mm of the sediment and showed a clear seasonal pattern; highest chlorophylls content was found during autumn and lowest during spring-summer. The temporal and spatial distribution of nutrients pools and MPB were largely correlated. Ammonium was higher in the IC and EX fractions, representing on average 59 and 37% of the total ammonium pool, respectively. Similarly, phosphate in the IC and EX fractions accounted on average for 40 and 31% of the total phosphate pool, respectively. Nitrate in the PW was low, suggesting low nitrification activity and rapid consumption. Nitrate accumulated in the IC pool during periods of moderate MPB abundance, being up to 66% of the total nitrate pool, whereas it decreased when chlorophyll concentration peaked likely due to a high nitrogen demand. EX-Nitrate accounted for the largest fraction of total sediment nitrate, 66% on average. The distribution of EX-Nitrate was significantly correlated with chlorophyll and OM, which probably indicates a relation of this pool to an increased availability of sites for ionic adsorption. This EX-Nitrate pool could represent an alternative nitrate source with significant concentrations available to the microbial community, deeper in the sediment below the oxic layer.

Quantifying Km-scale Hydrological Exchange Flows under Dynamic Flows and Their Influences on River Corridor Biogeochemistry

NASA Astrophysics Data System (ADS)

Chen, X.; Song, X.; Shuai, P.; Hammond, G. E.; Ren, H.; Zachara, J. M.

2017-12-01

Hydrologic exchange flows (HEFs) in rivers play vital roles in watershed ecological and biogeochemical functions due to their strong capacity to attenuate contaminants and process significant quantities of carbon and nutrients. While most of existing HEF studies focus on headwater systems with the assumption of steady-state flow, there is lack of understanding of large-scale HEFs in high-order regulated rivers that experience high-frequency stage fluctuations. The large variability of HEFs is a result of interactions between spatial heterogeneity in hydrogeologic properties and temporal variation in river discharge induced by natural or anthropogenic perturbations. Our 9-year spatially distributed dataset (water elevation, specific conductance, and temperature) combined with mechanistic hydrobiogeochemical simulations have revealed complex spatial and temporal dynamics in km-scale HEFs and their significant impacts on contaminant plume mobility and hyporheic biogeochemical processes along the Hanford Reach. Extended multidirectional flow behaviors of unconfined, river corridor groundwater were observed hundreds of meters inland from the river shore resulting from discharge-dependent HEFs. An appropriately sized modeling domain to capture the impact of regional groundwater flow as well as knowledge of subsurface structures controlling intra-aquifer hydrologic connectivity were essential to realistically model transient storage in this large-scale river corridor. This work showed that both river water and mobile groundwater contaminants could serve as effective tracers of HEFs, thus providing valuable information for evaluating and validating the HEF models. Multimodal residence time distributions with long tails were resulted from the mixture of long and short exchange pathways, which consequently impact the carbon and nutrient cycling within the river corridor. Improved understanding of HEFs using integrated observational and modeling approaches sheds light on developing fundamental understanding of the influences of HEFs on water quality, nutrient dynamics, and ecosystem health in dynamic river corridor systems.

Pore-Water Chemistry and Hydrology in a Spring-Fed River: Implications for Hyporheic Control of Nutrient Cycling and Speleogenesis

NASA Astrophysics Data System (ADS)

Kurz, M. J.; Martin, J. B.; Cohen, M. J.

2010-12-01

Hyporheic exchange is important for nutrient cycling in rivers, but little is known about the magnitude of this process in karst systems or its influence on speleogenesis and the formation of river channels. We use four pore-water depth profiles to assess nutrient and carbonate processing in the hyporheic zone (HZ) of the Ichetucknee River (north-central, Florida). Co-located pairs of stilling wells equipped with conductivity, temperature, depth (CTD) sensors are used to continuously monitor the hydraulic gradients within the HZ to determine flow directions and temporal variability of groundwater exchange. The Ichetucknee River is sourced from six major and numerous small springs which discharge from the karstic Floridan Aquifer. Downstream and diel variations in nitrate concentrations, specific conductivity and calcite saturation state reflect in-stream processing, but hyporheic exchange should also influence the overall dynamics of nutrient and carbonate fluxes in the river. Our depth profiles and stilling wells are located at four sites in a cross-channel transect and extend through unconsolidated sediment to the solid carbonate of the Floridan Aquifer 35-156 cm below the river bed. Decreasing DOC, pH, and DO concentrations and increased DIC are indicative of organic carbon remineralization in the shallow sediments. Increasing alkalinity, Ca concentrations, specific conductivity and decreasing calcite saturation state indicate carbonate dissolution being driven by the decreasing pH. Decreasing nitrate concentrations indicate denitrification and increasing phosphate concentration could be a result of carbonate dissolution or OC remineralization. Most of these changes appear to occur in the upper 60cm of sediment, below which many concentrations return to values observed in the groundwater, suggesting water discharges from the Floridan Aquifer at the base of the sediment. Hydraulic head is higher in the pore waters than the river indicating groundwater then discharges to the river. Initial modeling of the system indicates that flow through the channel sediment moves horizontally and discharges into the river through the incised channel rather than upwards through the most reactive hyporheic sediments. While differences in chemical composition between the pore water and river water suggest the chemically altered pore water could affect chemical composition of the river it remains unclear the relative fractions of ground water and chemically altered pore water that flow into the river. Future work will attempt to quantify the magnitude of these exchanges over a range of hydrologic conditions.

Comparison of methods for nutrient measurement in calcareous soils: Ion-exchange resin bag, capsule, membrane, and chemical extractions

USGS Publications Warehouse

Sherrod, S.K.; Belnap, J.; Miller, M.E.

2002-01-01

Four methods for measuring quantities of 12 plant-available nutrients were compared using three sandy soils in a series of three experiments. Three of the methods use different ion-exchange resin forms—bags, capsules, and membranes—and the fourth was conventional chemical extraction. The first experiment compared nutrient extraction data from a medium of sand saturated with a nutrient solution. The second and third experiments used Nakai and Sheppard series soils from Canyonlands National Park, which are relatively high in soil carbonates. The second experiment compared nutrient extraction data provided by the four methods from soils equilibrated at two temperatures, “warm” and “cold.” The third experiment extracted nutrients from the same soils in a field equilibration. Our results show that the four extraction techniques are not comparable. This conclusion is due to differences among the methods in the net quantities of nutrients extracted from equivalent soil volumes, in the proportional representation of nutrients within similar soils and treatments, in the measurement of nutrients that were added in known quantities, and even in the order of nutrients ranked by net abundance. We attribute the disparities in nutrient measurement among the different resin forms to interacting effects of the inherent differences in resin exchange capacity, differences among nutrients in their resin affinities, and possibly the relatively short equilibration time for laboratory trials. One constraint for measuring carbonate-related nutrients in high-carbonate soils is the conventional ammonium acetate extraction method, which we suspect of dissolving fine CaCO3 particles that are more abundant in Nakai series soils, resulting in erroneously high Ca2+ estimates. For study of plant-available nutrients, it is important to identify the nutrients of foremost interest and understand differences in their resin sorption dynamics to determine the most appropriate extraction method.

Synthesis, characterization and application of ion exchange resin as a slow-release fertilizer for wheat cultivation in space

NASA Astrophysics Data System (ADS)

Li, Bowei; Dong, Chen; Chu, Zhengpei; Zhang, Weizhe; Wang, Minjuan; Liu, Hong; Xie, Beizhen

2016-10-01

In addition to the bio-regenerative air revitalization, water recycling and waste management systems and their associated challenges, enhancing the crop yield with less fertilizer input for sustainable food production in space is also a challenge that needs to be overcome. The purpose of this study is to investigate the feasibility of applying ion exchange resin as a slow-release fertilizer for wheat cultivation in space. Strong-acid cationic exchange resins and weak-base anion exchange resins soaked in 1X, 5X, 10X and 15X Hoagland nutrient solutions, respectively, were used as fertilizers in clinoptilolite to cultivate wheat plants, and the morphological and physiological characteristics of the wheat plants were studied and compared with that of the wheat planted in vermiculite and nutrient solutions. The results showed that more ions were attached on the surface of the ion exchange resins as the solution concentration increased. After 14 days, the fresh weight of wheat planted in the ion exchange resin-clinoptilolite (IER-clinoptilolite) treated with 10X and 15X solutions were 190% and 192% higher than that of wheat planted in nutrient solution with the same concentration. Chlorophyll content of wheat plants cultivated in the two kinds of solid medium is significantly higher than that of liquid cultivation. The lowest peroxidase (POD) activity and malondialdehyde (MDA) contents of wheat plants cultivated in the IER-clinoptilolite appeared on the 14th day. According to all the experimental data, it's promising to produce slow-release nutrient fertilizer by using strong-acid cationic exchange resins and weak-base anion exchange resins for wheat cultivation in space.

The influence of particles recycling on the geochemistry of sediments in a large tropical dam lake in the Amazonian region, Brazil

NASA Astrophysics Data System (ADS)

Fonseca, Rita; Pinho, Catarina; Oliveira, Manuela

2016-12-01

As a result of over-erosion of soils, the fine particles, which contain the majority of nutrients, are easily washed away from soils, which become deficient in a host of components, accumulating in lakes. On one hand, the accumulation of nutrients-rich sediments are a problem, as they affect the quality of the overlying water and decrease the water storage capacity of the system; on the other hand, sediments may constitute an important resource, as they are often extremely rich in organic and inorganic nutrients in readily available forms. In the framework of an extensive work on the use of rock related materials to enhance the fertility of impoverish soils, this study aimed to evaluate the role on the nutrients cycle, of particles recycling processes from the watershed to the bottom of a large dam reservoir, at a wet tropical region under high weathering conditions. The study focus on the mineralogical transformations that clay particles undergo from the soils of the drainage basin to their final deposition within the reservoir and their influence in terms of the geochemical characteristics of sediments. We studied the bottom sediments that accumulate in two distinct seasonal periods in Tucuruí reservoir, located in the Amazonian Basin, Brazil, and soils from its drainage basin. The surface layers of sediments in twenty sampling points with variable depths, are representative of the different morphological sections of the reservoir. Nineteen soil samples, representing the main soil classes, were collected near the margins of the reservoir. Sediments and soils were subjected to the same array of physical, mineralogical and geochemical analyses: (1) texture, (2) characterization and semi-quantification of the clay fraction mineralogy and (3) geochemical analysis of the total concentration of major elements, organic compounds (organic C and nitrogen), soluble fractions of nutrients (P and K), exchangeable fractions (cation exchange capacity, exchangeable bases and acidity) and pH(H2O). There is a remarkable homogeneity in the sedimentary distribution along the reservoir in terms of the texture and mineralogy of the clay fraction and of the chemistry of the total, soluble and exchangeable phases. These observations contrast with the physical, morphological and chemical heterogeneity of the soils and the setting lithology. Most of the sediments has a higher contribution of fine-grained material and the mineralogy of the clay fraction is dominated by kaolinite in soils and kaolinite and illite in sediments, followed by lesser amounts of gibbsite, goethite, and metahaloisite and by small/vestigial contents of chlorite and smectite. The sediments are mainly inherited from the watershed but there exist marked differences between the accumulated sediments and their parent materials. These differences mainly come from the selective erosion of fine-grained particles and the extreme climatic conditions which enhance complex transformations of mineralogical and chemical nature. Compared with the parental soils, the reservoir sediments show the following differences: (1) enrichment in fine-grained and less dense inorganic particles, (2) aggradative mineralogical transformations, including enrichment in clay minerals with higher cationic adsorption and exchange capacity, (3) degradation of the crystalline structure of Fe- and Al-oxides (goethite, gibbsite), (4) increase in easily leached elements (Mg, Ca, P, K, Na) and decrease in chemically less mobile elements (Si, Fe) and (5) higher contents of organic carbon, nitrogen, and soluble forms of P and K, mainly concentrated in the clay fraction. These transformations are extremely important in the nutrients cycle, denoting that sediments represent an efficient sink for nutrients from the over-erosion of soils. Mineral and organic compounds can permanently or temporarily sequester these nutrients, recycling them and enhancing their availability through the slow release of components from relatively loose crystal structures. These processes can easily explain the enrichment in soluble and exchangeable forms of elements such as P, K, Ca or Mg. This study conclude that the particles recycling in a large tropical dam reservoir which receives high fluxes of allochthonous nutrients, has an important role in the good quality of sediments for agricultural use and in the profitable use of this technology to recover depleted soils in remediation projects in regions near large hydroelectric plants.

Molecular dissection of nutrient exchange at the insect-microbial interface.

PubMed

Douglas, Angela E

2014-10-01

Genome research is transforming our understanding of nutrient exchange between insects and intracellular bacteria. A key characteristic of these bacteria is their small genome size and gene content. Their fastidious and inflexible nutritional requirements are met by multiple metabolites from the insect host cell. Although the bacteria have generally retained genes coding the synthesis of nutrients required by the insect, some apparently critical genes have been lost, and compensated for by shared metabolic pathways with the insect host or supplementary bacteria with complementary metabolic capabilities. Copyright © 2014 Elsevier Inc. All rights reserved.

Wildfire and post-fire erosion impacts on forest ecosystem carbon and nitrogen: An analysis

Treesearch

D. G. Neary; S. T. Overby

2006-01-01

Many ecosystem processes occurring in soils depend upon the presence of organic matter. Soil organic matter is particularly important for nutrient supply, cation exchange capacity, and water retention, hence its importance in long-term site productivity. However, wildfires consume large amounts of aboveground organic material, and soil heating can consume soil organic...

Cross-Shelf Exchange.

PubMed

Brink, K H

2016-01-01

Cross-shelf exchange dominates the pathways and rates by which nutrients, biota, and materials on the continental shelf are delivered and removed. This follows because cross-shelf gradients of most properties are usually far greater than those in the alongshore direction. The resulting transports are limited by Earth's rotation, which inhibits flow from crossing isobaths. Thus, cross-shelf flows are generally weak compared with alongshore flows, and this leads to interesting observational issues. Cross-shelf flows are enabled by turbulent mixing processes, nonlinear processes (such as momentum advection), and time dependence. Thus, there is a wide range of possible effects that can allow these critical transports, and different natural settings are often governed by different combinations of processes. This review discusses examples of representative transport mechanisms and explores possible observational and theoretical paths to future progress.

Effects of moisture and nitrogen stress on gas exchange and nutrient resorption in Quercus rubra seedlings

Treesearch

K. Francis Salifu; Douglass F. Jacobs

2008-01-01

The effects of simulated soil fertility at three levels (poor, medium, and rich soils) and moisture stress at two levels (well watered versus moisture stressed) on gas exchange and foliar nutrient resorption in 1+0 bareroot northern red oak (Quercus rubra) seedlings were evaluated. Current nitrogen (N) uptake was labeled with the stable isotope

A 3D parameterization of nutrients atmospheric deposition to the global ocean

NASA Astrophysics Data System (ADS)

Myriokefalitakis, S.; Nenes, A.; Baker, A. R.; Mihalopoulos, N.; Kanakidou, M.

2016-12-01

Atmospheric deposition of trace constituents, both of natural and anthropogenic origin, can act as a nutrient source into the open ocean and affect marine ecosystem functioning and subsequently the exchange of CO2 between the atmosphere and the global ocean. Dust is known as a major source of nutrients (such as iron and phosphorus) to the global ocean, but only a fraction of these nutrients is released in soluble form that can be assimilated by the ecosystems. The global atmospheric iron (Fe) and phosphorus (P) cycles are here parameterized in a global 3-D chemical transport model. Both primary emissions of total and soluble Fe and P associated with dust and combustion processes are taken into account. The impact of atmospheric acidity on nutrient solubility is parameterised based on experimental findings and model results are evaluated by comparison with available observations. The effect of air-quality changes on soluble nutrient deposition is studied by performing sensitivity simulations using preindustrial, present and future emission scenarios. The link between the soluble Fe and P atmospheric deposition and anthropogenic sources is also investigated. Overall, the response of the chemical composition of nutrient-containing aerosols to environmental changes is demonstrated and quantified.

Drainage and fertilization effects on nutrient availability in an ombrotrophic peatland.

PubMed

Wang, Meng; Talbot, Julie; Moore, Tim R

2018-04-15

Nutrient availability is an important control on the vegetation distribution, productivity and functioning of peatland ecosystems and we examined spatial and temporal patterns of nutrient availability through ion exchange at Mer Bleue bog, southeast Ontario, Canada. We installed ion exchange probes at 5-15cm for 4weeks and determined nutrient sorption at undisturbed sites as well as those affected by nitrogen (N), phosphorus (P), potassium (K) fertilization and drainage. Under undisturbed conditions, the bog had very small amount of available nutrients, especially N (ammonium>nitrate) and P, and exhibited small variations in nutrient availability during the growing season (May to October). The increase in NPK availability upon fertilization was short-lived over the season and the stoichiometry of available NPK captured by the probes was mismatched with the vegetation. The increase in nutrient availability with drainage was confounded by substantial changes in vegetation. We compare these results with data from other Canadian bogs and fens to provide baseline data on nutrient availability in peatlands. Copyright © 2017 Elsevier B.V. All rights reserved.

Environmental and biogeochemical changes following a decade's reclamation in the Dapeng (Tapong) Bay, southwestern Taiwan

NASA Astrophysics Data System (ADS)

Hung, J.-J.; Huang, W.-C.; Yu, C.-S.

2013-09-01

This study examines the environmental and biogeochemical changes in Dapeng (formerly spelled Tapong) Bay, a semi-enclosed coastal lagoon in southwestern Taiwan, after two major reclamation works performed between 1999 and 2010. The lagoon was largely occupied by oyster culture racks and fish farming cages before December, 2002. Substantial external inputs of nutrients and organic carbon and the fairly long water exchange time (τ) (10 ± 2 days) caused the lagoon to enter a eutrophic state, particularly at the inner lagoon, which directly received nutrient inputs. However, the entire lagoon showed autotrophic, and the estimated net ecosystem production (NEP) during the first stage was 5.8 mol C m-2 yr-1. After January, 2003, the aquaculture structures were completely removed, and the τ decreased to 6 ± 2 days. The annual mean concentrations of dissolved oxygen increased, and nutrients decreased substantially, likely due to improved water exchange, absence of feeding and increased biological utilization. The NEP increased 37% to 7.7 mol C m-2 yr-1 after structure removal. The second reclamation work beginning from July, 2006, focused on establishing artificial wetlands for wastewater treatment and on dredging bottom sediment. Although the τ did not change significantly (8 ± 3 days), substantial decreases in nutrient concentrations and dissolved organic matter continued. The NEP (14.3 mol C m-2 yr-1) increased 85% compared to that in the second stage. The data suggest that the reclamations substantially improved water quality, carbon and nutrient biogeochemical processes and budgets in this semi-enclosed ecosystem.

[Changes of soil nutrient contents after prescribed burning of forestland in Heshan City, Guangdong Province].

PubMed

Sun, Yu-xin; Wu, Jian-ping; Zhou, Li-xia; Lin, Yong-biao; Fu, Sheng-lei

2009-03-01

A comparative study was conducted to analyze the changes of soil nutrient contents in Eucalyptus forestland and in shrubland after three years of prescribed burning. In Eucalyptus forestland, soil organic carbon, total nitrogen, available potassium contents and soil pH decreased significantly; soil available phosphorus and exchangeable magnesium contents, net nitrogen mineralization rate and ammonification rate also decreased but showed no significant difference. In shrubland, soil exchangeable calcium content increased significantly, but the contents of other nutrients had no significant change. The main reason of the lower soil net nitrogen mineralization rate in Eucalyptus forest could be the decrease of available substrates and the uptake of larger amount of soil nutrients by the fast growth of Eucalyptus. The soil nutrients in shrubland had a quick restoration rate after burning.

Changes in water mass exchange between the NW shelf areas and the North Atlantic and their impact on nutrient/carbon cycling

NASA Astrophysics Data System (ADS)

Gröger, Matthias; Maier-Reimer, Ernst; Mikolajewicz, Uwe; Segschneider, Joachim; Sein, Dimitry

2010-05-01

Despite their comparatively small extension on a global scale, shelf areas are of interest for several economic reasons and climatic processes related to nutrient cycling, sea food supply, and biological productivity. Moreover, they constitute an important interface for nutrients, pollutants and freshwater on their pathway from the continents to the open ocean. This modelling study aims to investigate the spatial and temporal variability of water mass exchange between the North Atlantic and the NW European shelf and their impact on nutrient/carbon cycling and biological productivity. For this, a new modeling approach has been set up which bridges the gap between pure shelf models where water mass transports across the model domain too strongly depend on the formulation of open boundaries and global models suffering under their too coarse resolution in shelf regions. The new model consists of the global ocean and carbon cycle model MPIOM/HAMOCC with strongly increased resolution in the North Sea and the North Atlantic coupled to the regional atmosphere model REMO. The model takes the full luni-solar tides into account. It includes further a 12 layer sediment module with the relevant pore water chemistry. The main focus lies on the governing mechanisms of water mass exchange across the shelf break and the imprint on shelf biogeochemistry. For this, artificial tracers with a prescribed decay rate have been implemented to distinguish waters arriving from polar and shelf regions and those that originate from the tropics. Experiments were carried out for the years 1948 - 2007. The relationship to larger scale circulation patterns like the position and variability of the subtropical and subpolar gyres is analyzed. The water mass exchange is analyzed with respect to the nutrient concentration and productivity on the European shelf areas. The implementation of tides leads to an enhanced vertical mixing which causes lower sea surface temperatures compared to simulations without tidal forcing. The simulated tidal currents exceed velocities of 30cm per second in the near bottom layer which leads to a strong resuspension of sediment particles. These effects are most pronounced along narrow and shallow topographic structures like e.g. the English Channel. Experiments with artificial tracers show that the composition of water column changes along with the induced climate warming.

Repeated use of ion-exchange resin membranes in calcareous soils

USGS Publications Warehouse

Sherrod, S.K.; Belnap, Jayne; Miller, M.E.

2003-01-01

This study compared the consistency of nutrient extraction among repeated cycles of ion-exchange resin membrane use. Two sandy calcareous soils and different equilibration temperatures were tested. No single nutrient retained consistent values from cycle to cycle in all treatments, although both soil source and temperature conferred some influence. It was concluded that the most conservative use of resin membranes is single-use.

SPRUCE Plant-Available Nutrients Assessed with Ion-Exchange Resins in Experimental Plots, Beginning in 2013

DOE Data Explorer

Iversen, C. M. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A; Latimer, J. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A; Burnham, A. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A; Brice, D. J. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A; Childs, J. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A; Vander Stel, H. M. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A

2017-01-01

This data set consists of observations of plant-available nutrients assessed using ion-exchange resin capsules incubated serially in aerobic and anaerobic peat layers beginning in 2013 in the SPRUCE experimental plots at four depths in hummock microtopography and two depths in hollow microtopography. Data will be periodically added to until the conclusion of the SPRUCE experiment.

Radiation-use efficiency and gas exchange responses to water and nutrient availability in irrigated and fertilized stands of sweetgum and sycamore

Treesearch

Christopher B. Allen; Rodney E. Will; Robert C. McGravey; David R. Coyle; Mark D. Coleman

2005-01-01

We investigated how water and nutrient availability affect radiation-use effeciency (e) and assessed leaf gas exchange as a possible mechanism for shifts in e. We measured aboveground net primary production (ANPP) and annual photosynthetically active radiation (PAR) capture to calculate e as well as leaf-level physiological variables (light-saturated net photosynthesis...

Phosphate addition enhanced soil inorganic nutrients to a large extent in three tropical forests.

PubMed

Zhu, Feifei; Lu, Xiankai; Liu, Lei; Mo, Jiangming

2015-01-21

Elevated nitrogen (N) deposition may constrain soil phosphorus (P) and base cation availability in tropical forests, for which limited evidence have yet been available. In this study, we reported responses of soil inorganic nutrients to full factorial N and P treatments in three tropical forests different in initial soil N status (N-saturated old-growth forest and two less-N-rich younger forests). Responses of microbial biomass, annual litterfall production and nutrient input were also monitored. Results showed that N treatments decreased soil inorganic nutrients (except N) in all three forests, but the underlying mechanisms varied depending on forests: through inhibition on litter decomposition in the old-growth forest and through Al(3+) replacement of Ca(2+) in the two younger forests. In contrast, besides great elevation in soil available P, P treatments induced 60%, 50%, 26% increases in sum of exchangeable (K(+)+Ca(2+)+Mg(2+)) in the old-growth and the two younger forests, respectively. These positive effects of P were closely related to P-stimulated microbial biomass and litter nutrient input, implying possible stimulation of nutrient return. Our results suggest that N deposition may result in decreases in soil inorganic nutrients (except N) and that P addition can enhance soil inorganic nutrients to support ecosystem processes in these tropical forests.

Phosphate addition enhanced soil inorganic nutrients to a large extent in three tropical forests

PubMed Central

Zhu, Feifei; Lu, Xiankai; Liu, Lei; Mo, Jiangming

2015-01-01

Elevated nitrogen (N) deposition may constrain soil phosphorus (P) and base cation availability in tropical forests, for which limited evidence have yet been available. In this study, we reported responses of soil inorganic nutrients to full factorial N and P treatments in three tropical forests different in initial soil N status (N-saturated old-growth forest and two less-N-rich younger forests). Responses of microbial biomass, annual litterfall production and nutrient input were also monitored. Results showed that N treatments decreased soil inorganic nutrients (except N) in all three forests, but the underlying mechanisms varied depending on forests: through inhibition on litter decomposition in the old-growth forest and through Al3+ replacement of Ca2+ in the two younger forests. In contrast, besides great elevation in soil available P, P treatments induced 60%, 50%, 26% increases in sum of exchangeable (K++Ca2++Mg2+) in the old-growth and the two younger forests, respectively. These positive effects of P were closely related to P-stimulated microbial biomass and litter nutrient input, implying possible stimulation of nutrient return. Our results suggest that N deposition may result in decreases in soil inorganic nutrients (except N) and that P addition can enhance soil inorganic nutrients to support ecosystem processes in these tropical forests. PMID:25605567

The Role of Placental Nutrient Sensing in Maternal-Fetal Resource Allocation1

PubMed Central

Díaz, Paula; Powell, Theresa L.; Jansson, Thomas

2014-01-01

ABSTRACT The placenta mediates maternal-fetal exchange and has historically been regarded as a passive conduit for nutrients. However, emerging evidence suggests that the placenta actively responds to nutritional and metabolic signals from the mother and the fetus. We propose that the placenta integrates a multitude of maternal and fetal nutritional cues with information from intrinsic nutrient-sensing signaling pathways to match fetal demand with maternal supply by regulating maternal physiology, placental growth, and nutrient transport. This process, which we have called placental nutrient sensing, ensures optimal allocation of resources between the mother and the fetus to maximize the chances for propagation of parental genes without jeopardizing maternal health. We suggest that these mechanisms have evolved because of the evolutionary pressures of maternal undernutrition, which result in decreased placental growth and down-regulation of nutrient transporters, thereby limiting fetal growth to ensure maternal survival. These regulatory loops may also function in response to maternal overnutrition, leading to increased placental growth and nutrient transport in cases of maternal obesity or gestational diabetes. Thus, placental nutrient sensing modulates maternal-fetal resource allocation to increase the likelihood of reproductive success. This model implies that the placenta plays a critical role in mediating fetal programming and determining lifelong health. PMID:25122064

The performance of ammonium exchanged zeolite for the biodegradation of petroleum hydrocarbons migrating in soil water.

PubMed

Freidman, Benjamin L; Gras, Sally L; Snape, Ian; Stevens, Geoff W; Mumford, Kathryn A

2016-08-05

Nitrogen deficiency has been identified as the main inhibiting factor for biodegradation of petroleum hydrocarbons in low nutrient environments. This study examines the performance of ammonium exchanged zeolite to enhance biodegradation of petroleum hydrocarbons migrating in soil water within laboratory scale flow cells. Biofilm formation and biodegradation were accelerated by the exchange of cations in soil water with ammonium in the pores of the exchanged zeolite when compared with natural zeolite flow cells. These results have implications for sequenced permeable reactive barrier design and the longevity of media performance within such barriers at petroleum hydrocarbon contaminated sites deficient in essential soil nutrients. Copyright © 2016 Elsevier B.V. All rights reserved.

Short-term impacts of nutrient manipulations on leaf gas exchange and biomass partitioning in contrasting 2-year-old Pinus taeda clones during seedling establishment

Treesearch

Michael C. Tyree; John R. Seiler; Chris A. Maier

2009-01-01

We conducted a 1-year greenhouse experiment to assess the impact of nutrient manipulations on seedling growth, biomass partitioning, and leaf gas exchange between two fast growing Pinus taeda clones that differed in growth efficiency. After 1 year we observed significant treatment and treatment by clone effects on growth, biomass partitioning, and...

3D numerical modeling of hyporheic exchange processes in fractal riverbed

NASA Astrophysics Data System (ADS)

Lee, A.; Aubeneau, A.

2017-12-01

The subsurface region receiving stream water is known as the hyporheic zone and the flow of water in and out of this zone is called hyporheic exchange. The hyporheic zone is populated by biofilms and is a hotspot for nutrient uptake and contaminant transformation. Traditionally, pumping models predicting the head distribution over the riverbed boundary are used to obtain the velocity field in the subsurface. However, past research has largely overlooked the nonlinearity of the turbulent flow above the bumpy riverbed. The main objective of this research is to investigate the effect of spatial and temporal heterogeneity created by turbulent flow on hyporheic exchange and residence time distribution in fractal channel beds. The 3-D fractal riverbed is created from the power spectrum. Large-Eddy Simulation is used to provide the pressure field over the benthic boundary. Finally, Darcian fluxes in the sub-surface are calculated and hyporheic travel times computed using random walks. Surface and subsurface transport processes are represented explicitly and can be studied in detail. Our results suggest that (1) Eddies and wakes around the dunes force the exchange (2) The bigger the dunes, the greater the influence of turbulence (3) Turbulence induces more exchange than pumping predicts.

Measuring nutrient flux in Pacific Coast salt marshes using fluctuating water-level chambers

EPA Science Inventory

Nutrient removal from the water column is an important ecosystem function that contributes to the production of clean water, a final valued ecosystem service of wetlands. However, little data is currently available for nutrient exchange in Pacific Northwest tidal ecosystems. We h...

Manufactured soils for plant growth at a lunar base

NASA Technical Reports Server (NTRS)

Ming, Douglas W.

1989-01-01

Advantages and disadvantages of synthetic soils are discussed. It is pointed out that synthetic soils may provide the proper physical and chemical properties necessary to maximize plant growth, such as a toxic-free composition and cation exchange capacities. The importance of nutrient retention, aeration, moisture retention, and mechanical support as qualities for synthetic soils are stressed. Zeoponics, or the cultivation of plants in zeolite substrates that both contain essential plant-growth cations on their exchange sites and have minor amounts of mineral phases and/or anion-exchange resins that supply essential plant growth ions, is discussed. It is suggested that synthetic zeolites at lunar bases could provide adsorption media for separation of various gases, act as catalysts and as molecular sieves, and serve as cation exchangers in sewage-effluent treatment, radioactive-waste disposal, and pollution control. A flow chart of a potential zeoponics system illustrates this process.

SPRUCE S1 Bog Plant-Available Nutrients Assessed with Ion-Exchange Resins from 2011-2012 in the Southern End of the S1 Bog

DOE Office of Scientific and Technical Information (OSTI.GOV)

Iversen, C. M.; Ontl, T. A.; Brice, D. J.

This data set consists of observations of plant-available nutrients assessed using ion-exchange resin capsules incubated serially in aerobic and anaerobic peat layers beginning in 2011. Data were collected from 2011 to 2012 (prior to the construction of the SPRUCE experimental plots) at the southern end of the S1 Bog at three depths in hollow microtopography only.

ESTUARINE-OCEAN EXCHANGE IN A NORTH PACIFIC ESTUARY: COMPARISON OF STEADY STATE AND DYNAMIC MODELS

EPA Science Inventory

Nutrient levels in coastal waters must be accurately assessed to determine the nutrient effects of increasing populations on coastal ecosystems. To accomplish this goal, in-field data with sufficient temporal resolution are required to define nutrient sources and sinks, and to ul...

ESTIMATING NITROGEN AND TIDAL EXCHANGE IN A NORTH PACIFIC ESTUARY WITH EPA'S VISUAL PLUMES PDSW MODEL

EPA Science Inventory

Accurate assessments of nutrient levels in coastal waters are required to determine the nutrient effects of increasing population pressure on coastal ecosystems. To accomplish this goal, in-field data with sufficient temporal resolution are required to define nutrient sources an...

ESTIMATING NITROGEN AND TIDAL EXCHANGE IN A NORTH PACIFIC ESTUARY WITH EPA'S VISUAL PLUMES PDSW MODEL

EPA Science Inventory

Accurate assessments of nutrient levels in coastal waters are required to determine the nutrient effects of increasing population pressure on coastal ecosystems. To accomplish this goal, in-field data with sufficient temporal resolution are required to define nutrient sources and...

Long-term trends in nutrient budgets of the western Dutch Wadden Sea (1976-2012)

NASA Astrophysics Data System (ADS)

Jung, A. S.; Brinkman, A. G.; Folmer, E. O.; Herman, P. M. J.; van der Veer, H. W.; Philippart, C. J. M.

2017-09-01

Long-term field observations of nitrogen [N] and phosphorus [P] concentrations were used to construct nutrient budgets for the western Dutch Wadden Sea between 1976 and 2012. Nutrients come into the western Dutch Wadden Sea via river runoff, through exchange with the coastal zone of the North Sea, neighbouring tidal basins and through atmospheric deposition (for N). The highest concentrations in phosphorus and nitrogen were observed in the mid-1980s. Improved phosphorus removal at waste water treatment plants, management of fertilization in agriculture and removal of phosphates from detergents led to reduced riverine nutrient inputs and, consequently, reduced nutrient concentrations in the Wadden Sea. The budgets suggest that the period of the initial net import of phosphorus and nitrogen switched to a net export in 1981 for nitrogen and in 1992 for phosphorus. Such different behaviour in nutrient budgets during the rise and fall of external nutrient concentrations may be the result of different sediment-water exchange dynamics for P and N. It is hypothesized that during the period of increasing eutrophication (1976-1981) P, and to a lesser degree N, were stored in sediments as organic and inorganic nutrients. In the following period (1981-1992) external nutrient concentrations (especially in the North Sea) decreased, but P concentrations in the Wadden Sea remained high due to prolonged sediment release, whilst denitrification removed substantial amounts of N. From 1992 onwards, P and N budgets were closed by net loss, most probably because P stores were then depleted and denitrification continued. Under the present conditions (lower rates of sediment import and depleted P stores), nutrient concentrations in this area are expected to be more strongly influenced by wind-driven exchange with the North Sea and precipitation-driven discharge from Lake IJssel. This implies that the consequences of climate change will be more important, than during the 1970s and 1980s.

Oxygen, carbon, and nutrient exchanges at the sediment-water interface in the Mar Piccolo of Taranto (Ionian Sea, southern Italy).

PubMed

De Vittor, Cinzia; Relitti, Federica; Kralj, Martina; Covelli, Stefano; Emili, Andrea

2016-07-01

In the shallow environment, the nutrient and carbon exchanges at the sediment-water interface contribute significantly to determine the trophic status of the whole water column. The intensity of the allochthonous input in a coastal environment subjected to strong anthropogenic pressures determines an increase in the benthic oxygen demand leading to depressed oxygen levels in the bottom waters. Anoxic conditions resulting from organic enrichment can enhance the exchange of nutrients between sediments and the overlying water. In the present study, carbon and nutrient fluxes at the sediment-water interface were measured at two experimental sites, one highly and one moderately contaminated, as reference point. In situ benthic flux measurements of dissolved species (O2, DIC, DOC, N-NO3 (-), N-NO2 (-), N-NH4 (+), P-PO4 (3-), Si-Si(OH)4, H2S) were conducted using benthic chambers. Furthermore, undisturbed sediment cores were collected for analyses of total and organic C, total N, and biopolymeric carbon (carbohydrates, proteins, and lipids) as well as of dissolved species in porewaters and supernatant in order to calculate the diffusive fluxes. The sediments were characterized by suboxic to anoxic conditions with redox values more negative in the highly contaminated site, which was also characterized by higher biopolymeric carbon content (most of all lipids), lower C/N ratios and generally higher diffusive fluxes, which could result in a higher release of contaminants. A great difference was observed between diffusive and in situ benthic fluxes suggesting the enhancing of fluxes by bioturbation and the occurrence of biogeochemically important processes at the sediment-water interface. The multi-contamination of both inorganic and organic pollutants, in the sediments of the Mar Piccolo of Taranto (declared SIN in 1998), potentially transferable to the water column and to the aquatic trophic chain, is of serious concern for its ecological relevance, also considering the widespread fishing and mussel farming activities in the area.

NutriSonic web expert system for meal management and nutrition counseling with nutrient time-series analysis, e-food exchange and easy data transition.

PubMed

Hong, Soon-Myung; Cho, Jee-Ye; Lee, Jin-Hee; Kim, Gon; Kim, Min-Chan

2008-01-01

This study was conducted to develop the NutriSonic Web Expert System for Meal Management and Nutrition Counseling with Analysis of User's Nutritive Changes of selected days and food exchange information with easy data transition. This program manipulates a food, menu and meal and search database that has been developed. Also, the system provides a function to check the user's nutritive change of selected days. Users can select a recommended general and therapeutic menu using this system. NutriSonic can analyze nutrients and e-food exchange ("e" means the food exchange data base calculated by a computer program) in menus and meals. The expert can insert and store a meal database and generate the synthetic information of age, sex and therapeutic purpose of disease. With investigation and analysis of the user's needs, the meal planning program on the internet has been continuously developed. Users are able to follow up their nutritive changes with nutrient information and ratio of 3 major energy nutrients. Also, users can download another data format like Excel files (.xls) for analysis and verify their nutrient time-series analysis. The results of analysis are presented quickly and accurately. Therefore it can be used by not only usual people, but also by dietitians and nutritionists who take charge of making a menu and experts in the field of food and nutrition. It is expected that the NutriSonic Web Expert System can be useful for nutrition education, nutrition counseling and expert meal management.

Vortical ciliary flows actively enhance mass transport in reef corals.

PubMed

Shapiro, Orr H; Fernandez, Vicente I; Garren, Melissa; Guasto, Jeffrey S; Debaillon-Vesque, François P; Kramarsky-Winter, Esti; Vardi, Assaf; Stocker, Roman

2014-09-16

The exchange of nutrients and dissolved gasses between corals and their environment is a critical determinant of the growth of coral colonies and the productivity of coral reefs. To date, this exchange has been assumed to be limited by molecular diffusion through an unstirred boundary layer extending 1-2 mm from the coral surface, with corals relying solely on external flow to overcome this limitation. Here, we present direct microscopic evidence that, instead, corals can actively enhance mass transport through strong vortical flows driven by motile epidermal cilia covering their entire surface. Ciliary beating produces quasi-steady arrays of counterrotating vortices that vigorously stir a layer of water extending up to 2 mm from the coral surface. We show that, under low ambient flow velocities, these vortices, rather than molecular diffusion, control the exchange of nutrients and oxygen between the coral and its environment, enhancing mass transfer rates by up to 400%. This ability of corals to stir their boundary layer changes the way that we perceive the microenvironment of coral surfaces, revealing an active mechanism complementing the passive enhancement of transport by ambient flow. These findings extend our understanding of mass transport processes in reef corals and may shed new light on the evolutionary success of corals and coral reefs.

The interplay between estuarine transport and biogeochemical processes in determining the nutrient conditions in bottom layers of non-tidal Gulf of Finland

NASA Astrophysics Data System (ADS)

Kõuts, Mariliis; Raudsepp, Urmas; Maljutenko, Ilja

2017-04-01

In coastal areas, especially estuaries, spatial distribution and seasonal cycling of chemical and biological variables is largely determined by local biogeochemical processes and water transport of different properties. In tidal estuaries, however, biogeochemical processes are affected by tides as frequent water exchange alters nutrient and oxygen concentrations. In wide and deep non-tidal estuary-type marginal seas spatial distribution and seasonal cycling are determined by the mixture of water transport and local biogeochemistry. The Baltic Sea is a stratified water basin where halocline divides the water column into two parts: upper layer, which is horizontally uniform in terms of distribution of chemical and biological parameters, and has clear seasonal cycle; and bottom part, where nutrient and oxygen dynamics is more complex. There water transport and sediment-water interface fluxes play a major role. Our prime focus is the Gulf of Finland in the Baltic Sea. It is a wide, non-tidal and stratified sub-basin known for its high nutrient concentrations and severe oxygen deficiency in summer. We modelled the Baltic Sea (including Gulf of Finland) using ERGOM, a biogeochemical model coupled with circulation model GETM. Seasonal cycling and water circulation were observed with a 40-year simulation from 1966 to 2006. Our results show that in shallow areas above halocline the seasonal cycle of phytoplankton, nutrients and oxygen concentrations is uniform in space. Water circulation does not create inhomogeneous distribution pattern of biogeochemical parameters and their seasonal cycle. The circulation in the Gulf of Finland is strongly modulated by the seasonality of estuarine transport. Below the halocline saline low-oxygen and nutrient-rich water is transported from the open Baltic Proper to the Gulf of Finland in spring and early summer. This results in the highest nutrient concentrations and the poorest oxygen conditions by the end of August. In the shallow area nutrients have high concentrations in March-April before the spring bloom of diatoms starts. Low oxygen and nutrient concentrations are observed at the end of August. There is a qualitative difference of nutrient dynamics between shallow and deep layers but quantification of the role of transport and local biogeochemical processes is still challenging.

Increased fluxes of shelf-derived materials to the central Arctic Ocean

PubMed Central

Kipp, Lauren E.; Charette, Matthew A.; Moore, Willard S.; Henderson, Paul B.; Rigor, Ignatius G.

2018-01-01

Rising temperatures in the Arctic Ocean region are responsible for changes such as reduced ice cover, permafrost thawing, and increased river discharge, which, together, alter nutrient and carbon cycles over the vast Arctic continental shelf. We show that the concentration of radium-228, sourced to seawater through sediment-water exchange processes, has increased substantially in surface waters of the central Arctic Ocean over the past decade. A mass balance model for 228Ra suggests that this increase is due to an intensification of shelf-derived material inputs to the central basin, a source that would also carry elevated concentrations of dissolved organic carbon and nutrients. Therefore, we suggest that significant changes in the nutrient, carbon, and trace metal balances of the Arctic Ocean are underway, with the potential to affect biological productivity and species assemblages in Arctic surface waters. PMID:29326980

Nutrient Exchange through Hyphae in Intercropping Systems Affects Yields

ERIC Educational Resources Information Center

Thun, Tim Von

2013-01-01

Arbuscular mycorrhizae fungi (AMF) play a large role in the current understanding of the soil ecosystem. They increase nutrient and water uptake, improve soil structure, and form complex hyphal networks that transfer nutrients between plants within an ecosystem. Factors such as species present, the physiological balance between the plants in the…

High nutrient pulses, tidal mixing and biological response in a small California estuary: Variability in nutrient concentrations from decadal to hourly time scales

USGS Publications Warehouse

Caffrey, J.M.; Chapin, T.P.; Jannasch, H.W.; Haskins, J.C.

2007-01-01

Elkhorn Slough is a small estuary in Central California, where nutrient inputs are dominated by runoff from agricultural row crops, a golf course, and residential development. We examined the variability in nutrient concentrations from decadal to hourly time scales in Elkhorn Slough to compare forcing by physical and biological factors. Hourly data were collected using in situ nitrate analyzers and water quality data sondes, and two decades of monthly monitoring data were analyzed. Nutrient concentrations increased from the mid 1970s to 1990s as pastures and woodlands were converted to row crops and population increased in the watershed. Climatic variability was also a significant factor controlling interannual nutrient variability, with higher nutrient concentrations during wet than drought years. Elkhorn Slough has a Mediterranean climate with dry and rainy seasons. Dissolved inorganic nitrogen (DIN) concentrations were relatively low (10-70 ??mol L-1) during the dry season and high (20-160 ??mol L-1) during the rainy season. Dissolved inorganic phosphorus (DIP) concentrations showed the inverse pattern, with higher concentrations during the dry season. Pulsed runoff events were a consistent feature controlling nitrate concentrations during the rainy season. Peak nitrate concentrations lagged runoff events by 1 to 6 days. Tidal exchange with Monterey Bay was also an important process controlling nutrient concentrations, particularly near the mouth of the Slough. Biological processes had the greatest effect on nitrate concentrations during the dry season and were less important during the rainy season. While primary production was enhanced by nutrient pulses, chlorophyll a concentrations were not. We believe that the generally weak biological response compared to the strong physical forcing in Elkhorn Slough occurred because the short residence time and tidal mixing rapidly diluted nutrient pulses. ?? 2006 Elsevier Ltd. All rights reserved.

The Coupling of Solution Chemistry to Plant Nutrient Demand in an on Demand Nutrient Delivery System

NASA Technical Reports Server (NTRS)

Savage, Wayne

1998-01-01

The goal of the proposal will be to determine the suitability of the DASI instrument in providing a signal that can be recognized and be utilized as an indicator of plant stress. The method to be utilized for evaluating stress is the presentation of an every increasing level of nutrient deficiency and salinity stress (addition of salt (NACl) or increasing concentration of balanced nutrient) while simultaneously recording spectral reflectance using the DASI instrument and monitoring the traditional processes of gas exchange and nutrient uptake parameters. In this manner, we will be able to directly compare the DASI measurements with known stresses as determined by the traditional gas exchange and nutrient uptake measures of stress. We anticipate that the DASI will provide a sensitive identifier of plant stress; recording signals of the resulting changes in plant metabolism in real time, far before any visible effects of stress could be observed. Thus, there is a potential for very early management intervention to correct a stress condition before damage could develop. The present response time for the observation of visual symptoms of plant stress is considerable and only provides an indication that a stress is present after it has been present for an extended period of time. Thus, the impact of a plant-based life support function will have already been significant. An additional benefit of this research to regenerative life support will be the characterization of a potential recovery scenario from various degrees of stress. The experimental approach to be employed includes the removal of the stress at various points in the stress gradient and the characterization of plant performance and reflectance spectra during recovery from various degrees of stress. Spectral reflectance imaging techniques have been developed and used to measure the biochemical composition of plants and relate these characteristics to the fluxes of biochemical elements within the ecosystem.

Cost-effective treatment of swine wastes through recovery of energy and nutrients.

PubMed

Amini, Adib; Aponte-Morales, Veronica; Wang, Meng; Dilbeck, Merrill; Lahav, Ori; Zhang, Qiong; Cunningham, Jeffrey A; Ergas, Sarina J

2017-11-01

Wastes from concentrated animal feeding operations (CAFOs) are challenging to treat because they are high in organic matter and nutrients. Conventional swine waste treatment options in the U.S., such as uncovered anaerobic lagoons, result in poor effluent quality and greenhouse gas emissions, and implementation of advanced treatment introduces high costs. Therefore, the purpose of this paper is to evaluate the performance and life cycle costs of an alternative system for treating swine CAFO waste, which recovers valuable energy (as biogas) and nutrients (N, P, K + ) as saleable fertilizers. The system uses in-vessel anaerobic digestion (AD) for methane production and solids stabilization, followed by struvite precipitation and ion exchange (IX) onto natural zeolites (chabazite or clinoptilolite) for nutrient recovery. An alternative approach that integrated struvite recovery and IX into a single reactor, termed STRIEX, was also investigated. Pilot- and bench-scale reactor experiments were used to evaluate the performance of each stage in the treatment train. Data from these studies were integrated into a life cycle cost analysis (LCCA) to assess the cost-effectiveness of various process alternatives. Significant improvement in water quality, high methane production, and high nutrient recovery (generally over 90%) were observed with both the AD-struvite-IX process and the AD-STRIEX process. The LCCA showed that the STRIEX system can provide considerable financial savings compared to conventional systems. AD, however, incurs high capital costs compared to conventional anaerobic lagoons and may require larger scales to become financially attractive. Copyright © 2017 Elsevier Ltd. All rights reserved.

Underestimation of boreal soil carbon stocks by mathematical soil carbon models linked to soil nutrient status

NASA Astrophysics Data System (ADS)

Ťupek, Boris; Ortiz, Carina A.; Hashimoto, Shoji; Stendahl, Johan; Dahlgren, Jonas; Karltun, Erik; Lehtonen, Aleksi

2016-08-01

Inaccurate estimate of the largest terrestrial carbon pool, soil organic carbon (SOC) stock, is the major source of uncertainty in simulating feedback of climate warming on ecosystem-atmosphere carbon dioxide exchange by process-based ecosystem and soil carbon models. Although the models need to simplify complex environmental processes of soil carbon sequestration, in a large mosaic of environments a missing key driver could lead to a modeling bias in predictions of SOC stock change.We aimed to evaluate SOC stock estimates of process-based models (Yasso07, Q, and CENTURY soil sub-model v4) against a massive Swedish forest soil inventory data set (3230 samples) organized by a recursive partitioning method into distinct soil groups with underlying SOC stock development linked to physicochemical conditions.For two-thirds of measurements all models predicted accurate SOC stock levels regardless of the detail of input data, e.g., whether they ignored or included soil properties. However, in fertile sites with high N deposition, high cation exchange capacity, or moderately increased soil water content, Yasso07 and Q models underestimated SOC stocks. In comparison to Yasso07 and Q, accounting for the site-specific soil characteristics (e. g. clay content and topsoil mineral N) by CENTURY improved SOC stock estimates for sites with high clay content, but not for sites with high N deposition.Our analysis suggested that the soils with poorly predicted SOC stocks, as characterized by the high nutrient status and well-sorted parent material, indeed have had other predominant drivers of SOC stabilization lacking in the models, presumably the mycorrhizal organic uptake and organo-mineral stabilization processes. Our results imply that the role of soil nutrient status as regulator of organic matter mineralization has to be re-evaluated, since correct SOC stocks are decisive for predicting future SOC change and soil CO2 efflux.

Temporal and spatial distributions of nutrients under the influence of human activities in Sishili Bay, northern Yellow Sea of China.

PubMed

Wang, Yujue; Liu, Dongyan; Dong, Zhijun; Di, Baoping; Shen, Xuhong

2012-12-01

The temporal and spatial distributions of dissolved inorganic nitrogen (DIN), dissolved organic nitrogen (DON), soluble reactive phosphorus (SRP) and dissolved reactive silica (DRSi) together with chlorophyll-a, temperature and salinity were analyzed monthly from December 2008 to March 2010 at four zones in Sishili Bay located in the northern Yellow Sea. The nutrient distribution was impacted by seasonal factors (biotic factors, temperature and wet deposition), physical factors (water exchange) and anthropogenic loadings. The seasonal variations of nutrients were mainly determined by the seasonal factors and the spatial distribution of nutrients was mainly related to water exchange. Anthropogenic loadings for DIN, SRP and DRSi were mainly from point sources, but for DON, non-point sources were also important. Nutrient limitation has changed from DIN in 1997 to SRP and DRSi in 2010, and this has resulted in changes in the dominant red tide species from diatom to dinoflagellates. Copyright © 2012 Elsevier Ltd. All rights reserved.

Rapid alkalization in Lake Inawashiro, Fukushima, Japan: implications for future changes in the carbonate system of terrestrial waters

NASA Astrophysics Data System (ADS)

Manaka, T.; Ushie, H.; Araoka, D.; Inamura, A.; Suzuki, A.; Kawahata, H.

2013-12-01

The global carbon cycle, one of the important biogeochemical cycles controlling the surface environment of the Earth, has been greatly affected by human activity. Anthropogenic nutrient loading from urban sewage and agricultural runoff has caused eutrophication of aquatic systems. The impact of this eutrophication and consequent photosynthetic activity on CO2 exchange between freshwater systems and the atmosphere is unclear. In this study, we focused on how nutrient loading to lakes affects their carbonate system. Here, we report results of surveys of lakes in Japan at different stages of eutrophication. Alkalization due to photosynthetic activity and decreases in PCO2 had occurred in eutrophic lakes (e.g., Lake Kasumigaura), whereas in an acidotrophic lake (Lake Inawashiro) that was impacted by volcanic hot springs, nutrient loading was changing the pH and carbon cycling. When the influence of volcanic activity was stronger in the past in Lake Inawashiro, precipitation of volcanic-derived iron and aluminum had removed nutrients by co-precipitation. During the last three decades, volcanic activity has weakened and the lake water has become alkalized. We inferred that this rapid alkalization did not result just from the reduction in acid inputs but was also strongly affected by increased photosynthetic activity during this period. Human activities affect many lakes in the world. These lakes may play an important part in the global carbon cycle through their influence on CO2 exchange between freshwater and the atmosphere. Biogeochemical changes and processes in these systems have important implications for future changes in aquatic carbonate systems on land.

Effects of river-floodplain exchange on water quality and nutrient export in the dam-impacted Kafue River (Zambia)

NASA Astrophysics Data System (ADS)

Zurbrugg, R.; Wamulume, J.; Blank, N.; Nyambe, I.; Wehrli, B.; Senn, D. B.

2010-12-01

Biogeochemical processes in river-floodplain ecosystems are strongly influenced by hydrology and, in particular, river-floodplain exchange. In tropical systems, where the hydrology is dominated by distinct dry and rainy seasons, annual flood waters trigger organic matter mineralization within and nutrient export from the dried and rewetted floodplain, and the magnitude of hydrological exchange between a river and its floodplain has the potential to substantially influence nutrient and carbon exports and water quality in the river. In this study we examined the extent and the effects of hydrological river-floodplain exchange in the Kafue River and its floodplain, the Kafue Flats, in Zambia. The Kafue Flats is a 7000 km2 seasonal wetland whose hydrological regime has been impacted by upstream and downstream large dams constructed in the 1970s, leading to changes in the flooding pattern in this high-biodiversity ecosystem. Field campaigns, carried out during flood recession (May 2008, 2009, 2010) and covering a ~400 km river stretch, revealed a steep decline in dissolved oxygen from 6 mg/L to 1 mg/L over a ~20 km stretch of river beginning approximately 200 km downstream from the first dam, with low oxygen persisting for an additional 150 km downstream. To further explore this phenomenon discharge measurements (ADCP) were conducted in May 2009 and May 2010. River discharge decreased from ~600 m3/s at the upstream dam to 100 m3/s midway through the Kafue Flats, and increased to >800 m3/s towards the end of the floodplain (400 km downstream). River cross section data indicate that the dramatic decrease in discharge occured primarily because of variations in channel area and channel carrying capacity, with channel constrictions forcing ~85% of the discharge out of the river channel and into the floodplain. Using specific conductivity and δ18O-H2O as tracers for floodplain water, we estimate that the downstream increases in flow occur through lateral inflows of receding floodplain waters, induced by an expansion of the river channel, and that 80% of the downstream flow came from the floodplain. Model calculations indicate that intense exchange between river and floodplain and the introduction of low-oxygen floodplain water into the river was the primary cause of the low dissolved oxygen levels observed in the river during flood recession in May 2008-2010. This exchange also appears to play an important role in nutrient and carbon export, with the floodplain acting as a net source of phosphate (220 tons/yr), total nitrogen (1300 tons/yr, of which ~90% was organic nitrogen) and total organic carbon (50,000 tons/yr) to downstream systems.

The architecture of Norway spruce ectomycorrhizae: three-dimensional models of cortical cells, fungal biomass, and interface for potential nutrient exchange.

PubMed

Stögmann, Bernhard; Marth, Andreas; Pernfuß, Barbara; Pöder, Reinhold

2013-08-01

Gathering realistic data on actual fungal biomass in ectomycorrhized fine root systems is still a matter of concern. Thus far, observations on architecture of ectomycorrhizae (ECMs) have been limited to analyses of two-dimensional (2-D) images of tissue sections. This unavoidably causes stereometrical problems that lead to inadequate assumptions about actual size of cells and their arrangement within ECM's functional compartments. Based on extensive morphological investigations of field samples, we modeled the architectural components of an average-sized Norway spruce ECM. In addition to our comprehensive and detailed quantitative data on cell sizes, we studied actual shape and size, in vivo arrangement, and potential nutrient exchange area of plant cortical cells (CCs) using computer-aided three-dimensional (3-D) reconstructions based on semithin serial sections. We extrapolated a factual fungal biomass in ECMs (Hartig net (HN) included) of 1.71 t ha(-1) FW (0.36 t ha(-1) DW) for the top 5 cm of soil for an autochthonous, montane, optimum Norway spruce stand in the Tyrolean Alps. The corresponding potential nutrient exchange area in ECMs including main axes of ECM systems, which is defined as the sum of interfaces between plant CCs and the HN, amounts to at least 3.2 × 10(5) m(2) ha(-1). This is the first study that determines the contribution of the HN to the total fungal biomass in ECMs as well as the quantification of its contact area. Our results may stimulate future research on fungal below-ground processes and their impact on the global carbon cycle.

A Data Base of Nutrient Use, Water Use, CO2 Exchange, and Ethylene Production by Soybeans in a Controlled Environment

NASA Technical Reports Server (NTRS)

Wheeler, R. M.; Mackowiak, C. L.; Peterson, B. V.; Sager, J. C.; Knott, W. M.; Berry, W. L.; Sharifi, M. R.

1998-01-01

A data set is given describing daily nutrient and water uptake, carbon dioxide (CO2) exchange, ethylene production, and carbon and nutrient partitioning from a 20 sq m stand of soybeans (Glycine max (L.) Merr. cv. McCall] for use in bioregenerative life support systems. Stand CO2 exchange rates were determined from nocturnal increases in CO2 (respiration) and morning drawdowns (net photosynthesis) to a set point of 1000 micromol/ mol each day (i.e., a closed system approach). Atmospheric samples were analyzed throughout growth for ethylene using gas chromatography with photoionization detection (GC/PH)). Water use was monitored by condensate production from the humidity control system, as well as water uptake from the nutrient solution reservoirs each day. Nutrient uptake data were determined from daily additions of stock solution and acid to maintain an EC of 0.12 S/m and pH of 5.8. Dry mass yields of seeds, pods (without seeds), leaves, stems, and roots are provided, as well as elemental and proximate nutritional compositions of the tissues. A methods section is included to qualify any assumptions that might be required for the use of the data in plant growth models, along with a daily event calendar documenting set point adjustments and the occasional equipment or sensor failure.

A program in global biology. [biota-environment interaction important to life

NASA Technical Reports Server (NTRS)

Mooneyhan, D. W.

1983-01-01

NASA's Global Biology Research Program and its goals for greater understanding of planetary biological processes are discussed. Consideration is given to assessing major pathways and rates of exchange of elements such as carbon and nitrogen, extrapolating local rates of anaerobic activities, determining exchange rates of ocean nutrients, and developing models for the global cycles of carbon, nitrogen, sulfur, and phosphorus. Satellites and sensors operating today are covered: the Nimbus, NOAA, and Landsat series. Block diagrams of the software and hardware for a typical ground data processing and analysis system are provided. Samples of the surface cover data achieved with the Advanced Very High Resolution Radiometer, the Multispectral Scanner, and the Thematic Mapper are presented, as well as a productive capacity model for coastal wetlands. Finally, attention is given to future goals, their engineering requirements, and the necessary data analysis system.

New insights into carbon acquisition and exchanges within the coral–dinoflagellate symbiosis under NH4+ and NO3− supply

PubMed Central

Ezzat, Leïla; Maguer, Jean-François; Grover, Renaud; Ferrier-Pagès, Christine

2015-01-01

Anthropogenic nutrient enrichment affects the biogeochemical cycles and nutrient stoichiometry of coastal ecosystems and is often associated with coral reef decline. However, the mechanisms by which dissolved inorganic nutrients, and especially nitrogen forms (ammonium versus nitrate) can disturb the association between corals and their symbiotic algae are subject to controversial debate. Here, we investigated the coral response to varying N : P ratios, with nitrate or ammonium as a nitrogen source. We showed significant differences in the carbon acquisition by the symbionts and its allocation within the symbiosis according to nutrient abundance, type and stoichiometry. In particular, under low phosphate concentration (0.05 µM), a 3 µM nitrate enrichment induced a significant decrease in carbon fixation rate and low values of carbon translocation, compared with control conditions (N : P = 0.5 : 0.05), while these processes were significantly enhanced when nitrate was replaced by ammonium. A combined enrichment in ammonium and phosphorus (N : P = 3 : 1) induced a shift in nutrient allocation to the symbionts, at the detriment of the host. Altogether, these results shed light into the effect of nutrient enrichment on reef corals. More broadly, they improve our understanding of the consequences of nutrient loading on reef ecosystems, which is urgently required to refine risk management strategies. PMID:26203006

Tidal exchange between a freshwater tidal marsh and an impacted estuary: the Scheldt estuary, Belgium

NASA Astrophysics Data System (ADS)

Van Damme, Stefan; Frank, Dehairs; Micky, Tackx; Olivier, Beauchard; Eric, Struyf; Britta, Gribsholt; Oswald, Van Cleemput; Patrick, Meire

2009-11-01

Tidal marsh exchange studies are relatively simple tools to investigate the interaction between tidal marshes and estuaries. They have mostly been confined to only a few elements and to saltwater or brackish systems. This study presents mass-balance results of an integrated one year campaign in a freshwater tidal marsh along the Scheldt estuary (Belgium), covering oxygen, nutrients (N, P and Si), carbon, chlorophyll, suspended matter, chloride and sulfate. The role of seepage from the marsh was also investigated. A ranking between the parameters revealed that oxygenation was the strongest effect of the marsh on the estuarine water. Particulate parameters showed overall import. Export of dissolved silica (DSi) was more important than exchange of any other nutrient form. Export of DSi and import of total dissolved nitrogen (DIN) nevertheless contributed about equally to the increase of the Si:N ratio in the seepage water. The marsh had a counteracting effect on the long term trend of nutrient ratios in the estuary.

Veggie Passive Orbital Nutrient Delivery System (PONDS)

NASA Image and Video Library

2018-02-27

Project scientists, place seeds in Veggie Passive Orbital Nutrient Delivery System (PONDS) units inside a laboratory at the Space Station Processing Facility at NASA’s Kennedy Space Center in Florida. Veggie PONDS is a direct follow-on to the Veg-01 and Veg-03 hardware and plant growth validation tests. The primary goal of this newly developed plant growing system, Veggie PONDS, is to demonstrate uniform plant growth. PONDS units have features that are designed to mitigate microgravity effects on water distribution, increase oxygen exchange and provide sufficient room for root zone growth. PONDS is planned for use during Veg-04 and Veg-05 on the International Space Station after the Veggie PONDS Validation flights on SpaceX-14 and OA-9.

A Non-Equilibrium Sediment Transport Model for Coastal Inlets and Navigation Channels

DTIC Science & Technology

2011-01-01

exchange of water , sediment, and nutrients between estuaries and the ocean. Because of the multiple interacting forces (waves, wind, tide, river...in parallel using OpenMP. The CMS takes advantage of the Surface- water Modeling System (SMS) interface for grid generation and model setup, as well...as for plotting and post- processing (Zundel, 2000). The circulation model in the CMS (called CMS-Flow) computes the unsteady water level and

Advanced nutrient root feeding system for conveyer-type cylindrical plant growth facilities developed for microgravity

NASA Astrophysics Data System (ADS)

Berkovich, Yuliy A.; Smolyanina, Svetlana O.; Krivobok, Anna; Krivobok, Nikolay

A new brand of cylindrical conveyer-type space plant growth facilities (PGF) has been created to improve of cosmonauts’ diet in the microgravity conditions. Up to date several ground prototypes of the space PGF have been made and tested: “Phytocycle”, “Vitacycle”, “Phytocycle-LED”, “Phytoconveyer”; now the space PGF “Vitacycle-T” for the Russian segment of the ISS is under developing. In the PGFs the ion-exchange salt-saturated fibrous artificial soil (AS) is used as a root medium. We have proposed the system for enrichment of irrigation water by nutrients to decrease of the AS store required for PGF working during the long space mission. The system includes root modules filled in fibrous ion-exchange AS, the enrichment column with crumble salt-saturation ion-exchange resin and the cassette with slow releasing fertilizer (SRF). Both substrates (ion-exchange resin and SRF) are necessary because of the SRF contains mostly N, P and K but another three essential elements S, Ca, Mg are provided by the ion-exchange resin. In the system water goes throw the enrichment column with ion-exchange resin fertilizing by the nutrients and comes into the mixer cell fertilize equipped with the electrical conductivity sensor. When the signal of the conductivity sensor is coming to the controller it turns on the pump directed the water flow throw the cassette with SRF until the electric conductivity of the solution in the mixer cell will reach the setpoint. The nutrient root feeding system was tested during 88 days when Chinese cabbage grew in PGF “Phytocycle-LED”. The crop has been continuously illuminated by red and blue LEDs in the PPF ratio 7 to 1; an integral PPF level has been (240 ± 10) µmol/(m2×s). There was no renewal of the used fibrous AS during the experiment. The PGF total electric power consumption was of 0,45 kW. The average fresh biomass productivity of the PGF during steady state working mode was equal 135×g/day per m2 of the illuminated crop area and specific productivity was 4,15 g per 1 g of ion-exchange resin “BIONA-312” and SRF “Osmocote 14-14-14” total mass. The solution pH in the pores of the moistened fibrous AS “BIONA-V3” persisted inside diapason of 6,0 - 6,6 which was favorable for the most greens. The data permits to hope that the nutrient root feeding system could be able to stabilize the nutrient solution in microgravity automatically and minimize the required supply of a fibrous AS.

H(+)/solute-induced intracellular acidification leads to selective activation of apical Na(+)/H(+) exchange in human intestinal epithelial cells.

PubMed

Thwaites, D T; Ford, D; Glanville, M; Simmons, N L

1999-09-01

The intestinal absorption of many nutrients and drug molecules is mediated by ion-driven transport mechanisms in the intestinal enterocyte plasma membrane. Clearly, the establishment and maintenance of the driving forces - transepithelial ion gradients - are vital for maximum nutrient absorption. The purpose of this study was to determine the nature of intracellular pH (pH(i)) regulation in response to H(+)-coupled transport at the apical membrane of human intestinal epithelial Caco-2 cells. Using isoform-specific primers, mRNA transcripts of the Na(+)/H(+) exchangers NHE1, NHE2, and NHE3 were detected by RT-PCR, and identities were confirmed by sequencing. The functional profile of Na(+)/H(+) exchange was determined by a combination of pH(i), (22)Na(+) influx, and EIPA inhibition experiments. Functional NHE1 and NHE3 activities were identified at the basolateral and apical membranes, respectively. H(+)/solute-induced acidification (using glycylsarcosine or beta-alanine) led to Na(+)-dependent, EIPA-inhibitable pH(i) recovery or EIPA-inhibitable (22)Na(+) influx at the apical membrane only. Selective activation of apical (but not basolateral) Na(+)/H(+) exchange by H(+)/solute cotransport demonstrates that coordinated activity of H(+)/solute symport with apical Na(+)/H(+) exchange optimizes the efficient absorption of nutrients and Na(+), while maintaining pH(i) and the ion gradients involved in driving transport.

Comparative Model Evaluation Studies of Biogenic Trace Gas Fluxes in Tropical Forests

NASA Technical Reports Server (NTRS)

Potter, C. S.; Peterson, David L. (Technical Monitor)

1997-01-01

Simulation modeling can play a number of important roles in large-scale ecosystem studies, including synthesis of patterns and changes in carbon and nutrient cycling dynamics, scaling up to regional estimates, and formulation of testable hypotheses for process studies. Recent comparative studies have shown that ecosystem models of soil trace gas exchange with the atmosphere are evolving into several distinct simulation approaches. Different levels of detail exist among process models in the treatment of physical controls on ecosystem nutrient fluxes and organic substrate transformations leading to gas emissions. These differences are is in part from distinct objectives of scaling and extrapolation. Parameter requirements for initialization scalings, boundary conditions, and time-series driven therefore vary among ecosystem simulation models, such that the design of field experiments for integration with modeling should consider a consolidated series of measurements that will satisfy most of the various model requirements. For example, variables that provide information on soil moisture holding capacity, moisture retention characteristics, potential evapotranspiration and drainage rates, and rooting depth appear to be of the first order in model evaluation trials for tropical moist forest ecosystems. The amount and nutrient content of labile organic matter in the soil, based on accurate plant production estimates, are also key parameters that determine emission model response. Based on comparative model results, it is possible to construct a preliminary evaluation matrix along categories of key diagnostic parameters and temporal domains. Nevertheless, as large-scale studied are planned, it is notable that few existing models age designed to simulate transient states of ecosystem change, a feature which will be essential for assessment of anthropogenic disturbance on regional gas budgets, and effects of long-term climate variability on biosphere-atmosphere exchange.

Inorganic N and P dynamics of Antarctic glacial meltwater streams as controlled by hyporheic exchange and benthic autotrophic communities

USGS Publications Warehouse

McKnight, Diane M.; Runkel, R.L.; Tate, C.M.; Duff, J.H.; Moorhead, D.L.

2004-01-01

The McMurdo Dry Valleys of South Victoria Land, Antarctica, contain numerous glacial meltwater streams that drain into lakes on the valley floors. Many of the streams have abundant perennial mats of filamentous cyanobacteria. The algal mats grow during streamflow in the austral summer and are in a dormant freeze-dried state during the rest of the year. NO3 and soluble reactive P (SRP) concentrations were lower in streams with abundant algal mats than in streams with sparse algal mats. NO3 and SRP concentrations were higher in the hyporheic zone of a stream with abundant algal mats than in the stream itself. An experimental injection of LiCl, NaNO3, and K3PO4 was conducted in Green Creek, which has abundant algal mats. Substantial hyporheic exchange occurred. The NO3 and PO4 concentrations at 50 m below the injection were 55 ??M and 18 ??M, respectively, during the experiment. NO3 and PO4 concentrations were below the detection limit of 1 to 2 ??M at a site 497 m below the injection during the Cl tracer arrival, indicating a high capacity for nutrient uptake by algal communities. NO2 and NH4 were present at sites 226 and 327 m below the injection, indicating that, in addition to denitrification and algal uptake, dissimilatory NO3 reduction to NO2 and NH4 may be a NO3 sink during transport. Transport modelling with nutrient uptake represented as a 1st-order process yielded reach-scale parameters of 4.3 ?? 10-5 to 3.9 ?? 10-4/s and 1.4 ?? 10-4 to 3.8 ?? 10 -4/s for uptake of NO3 and PO4, respectively. The best match with the observed data was a model in which PO4 uptake occurred only in the main channel and NO3 uptake occurred in the main channel and in the hyporheic zone. Hyporheic NO3 uptake was 7 to 16% of the total uptake for the different stream reaches. These results demonstrate that nutrient flux to the lakes is controlled by hyporheic exchange and nutrient uptake by algal mats in dry valley streams. Streams without algal mats contribute more nutrients to the lakes than streams with algal mats.

A Dynamic Nutrient Budget of Subsystem Interactions in a Salt Marsh Estuary

NASA Astrophysics Data System (ADS)

Childers, Daniel L.; McKellar, Henry N.; Dame, Richard F.; Sklar, Fred H.; Blood, Elizabeth R.

1993-02-01

In tidal salt marsh estuaries, the different habitats of the ecosystem interact primarily through the tidal creek water column. These interactions include nutrient and materials exchanges with the salt marsh, oyster reefs, creek bottoms, and adjacent uplands. Nutrient budgets are often used to synthesize these kinds of subsystem exchange data, and are usually based on annual totals without accounting for nutrient variability at finer temporal resolutions. In this paper, we present a dynamic budget of carbon (C), nitrogen (N), and phosphorus (P) for the North Inlet estuary, South Carolina that synthesizes subsystem flux data in a new way. We have developed a dynamic budget that uses a tidal hydrology model to generate daily areas of inundated intertidal habitat (i.e. vegetated marsh and oyster reef) from tidal heights calculated hourly and combines them with flux data to determine a net daily input to, or removal from, the water column. Daily surpluses or deficits of each nutrient were compared with daily rates of change in observed tidally-averaged nutrient concentrations. Particular emphasis was placed on evaluating budget output from the intertidal subsystems. We compared our total annual budgets to values from syntheses of two North Inlet flux studies. Although areas of marsh inundated were 150-200 times greater than areas of oyster reef inundated, interactions per unit volume of estuarine water column were comparable in magnitude for soluble reactive P (SRP), particulate organic C (POC), and dissolved organic C (DOC). The marsh dominated the ammonium (NH +4) and nitrate + nitrite (NN) exchanges in the summer but the NH +4 and POC output were particularly sensitive to changes in oyster reef area. Winter and spring DOC release by the marsh coincided closely (in timing and magnitude) with the peak in DOC concentrations observed in the North Inlet estuary, suggesting that forest stream inputs of DOC are not nearly as important as has been hypothesized. Comparison of our budget predictions to a previous synthesis of the same subsytem flux data confirmed the power of using tidal hydrology to estimate subsystem interactions between sampling times. These comparisons also emphasized the importance of (1) water column processes to NH +4 dynamics (2) subtidal benthic fluxes to DOC dynamics, and (3) external inputs to NN dynamics. By incorporating our best current knowledge of estuary-wide subsystem areas, the dynamic budget also allowed us to link subsystem flux data to the results of a study quantifying exchanges between the estuary and the coastal ocean. That comparison indicated the shortcomings of any site-specific extrapolation to whole-system conclusions where a homogeneous ecosystem must be assumed. We used the differences between our total annual C, N, and P budgets and reported exports of those constituents from the system to generate hypotheses and suggest future research efforts both at North Inlet and southeastern salt marsh estuaries in general.

Element exchange in a water-and gas-closed biological life support system

NASA Astrophysics Data System (ADS)

1997-01-01

Liquid human wastes and household water used for nutrition of wheat made possible to realize 24% closure for the mineral exchange in an experiment with a 2-component version of ``Bios-3'' life support system (LSS) Input-output balances of revealed, that elements (primarily trace elements) within the system. The structural materials (steel, titanium), expanded clay aggregate, and catalytic furnace catalysts. By the end of experiment, the permanent nutrient solution, plants, and the human diet gradually built up Ni, Cr, Al, Fe, V, Zn, Cu, and Mo. Thorough selection and pretreatment of materials can substantially reduce this accumulation. To enhance closure of the mineral exchange involves processing of human- metabolic wastes and inedible biomes inside LSS. An efficient method to oxidize wastes by hydrogen peroxide in a quartz reactor at the temperature of 80°C controlled electromagnetic field is proposed.

Element exchange in a water-and gas-closed biological life support system

NASA Astrophysics Data System (ADS)

Gribovskaya, I. V.; Kudenko, Yu. A.; Gitelson, J. I.

1997-01-01

Liquid human wastes and household water used for nutrition of wheat made possible to realize 24% closure for the mineral exchange in an experiment with a 2-component version of ``Bios-3'' life support system (LSS) Input-output balances of revealed, that elements (primarily trace elements) within the system. The structural materials (steel, titanium), expanded clay aggregate, and catalytic furnace catalysts. By the end of experiment, the permanent nutrient solution, plants, and the human diet gradually built up Ni, Cr, Al, Fe, V, Zn, Cu, and Mo. Thorough selection and pretreatment of materials can substantially reduce this accumulation. To enhance closure of the mineral exchange involves processing of human- metabolic wastes and inedible biomes inside LSS. An efficient method to oxidize wastes by hydrogen peroxide in a quartz reactor at the temperature of 80 degC controlled electromagnetic field is proposed.

Using a Spectral Method to Evaluate Hyporheic Exchange and its Effect on Reach Scale Nitrate Removal.

NASA Astrophysics Data System (ADS)

Moren, I.; Worman, A. L. E.; Riml, J.

2017-12-01

Previous studies have shown that hyporheic exchange processes can be of great importance for the transport, retention and mass removal of nutrients in streams. Specifically, the flow of surface water through the hyporheic zone enhances redox-sensitive reactions such as coupled nitrification-denitrification. This self-cleaning capacity of streams can be utilized in stream restoration projects aiming to improve water quality by reconstructing the geomorphology of the streams. To optimize the effect of restoration actions we need quantitative understanding of the linkage between stream geomorphology, hyporheic exchange processes and the desired water quality targets. Here we propose an analytical, spectral methodology to evaluate how different stream geomorphologies induce hyporheic exchange on a wide range of spatial and temporal scales. Measurements of streambed topographies and surface water profiles from agricultural streams were used to calculate the average hyporheic exchange velocity and residence times and the result was compared with in-stream tracer test. Furthermore, the hyporheic exchange induced by steps in the surface water profile was derived as a comparison of the theoretical capacity of the system. Based on differences in hyporheic exchange, the mass removal of nitrate could be derived for the different geomorphologies. The maximum nitrate mass removal was found to be related to a specific Damkhöler number, which reflects that the mass removal can be either reaction or transport controlled. Therefore, although hyporheic exchange induced by steps in the surface water profile was generally larger than the hyporheic exchange in the observed natural reaches, this would not necessarily lead a larger nitrate mass removal provided that the hyporheic residence times are not long enough to facilitate denitrification processes. The study illustrates the importance to investigate a stream thoroughly before any remediation actions are implemented, specifically to evaluate if the mass removal is reaction or transport controlled.

Hydrological heterogeneity, nutrient dynamics and water quality of a non-tidal lentic ecosystem (Lesina Lagoon, Italy)

NASA Astrophysics Data System (ADS)

Roselli, Leonilde; Fabbrocini, Adele; Manzo, Cristina; D'Adamo, Raffaele

2009-10-01

The dynamics of the Lesina coastal lagoon (Italy) in terms of nutrients, phytoplankton and chemical-physical parameters were evaluated, together with their functional relationships with freshwater inputs, in order to identify ecosystem responses to changes in driving forces in a Mediterranean non-tidal lentic environment. Lesina Lagoon is a shallow coastal environment characterised by limited exchange with coastal waters, which favours enrichment of nutrients and organic matter and benthic fluxes within the system. Lagoon-sea exchanges are influenced by human management. There is a steep salinity gradient from East to West. High nitrogen and silica values were found close to freshwater inputs, indicating wastewater discharges and agricultural runoff, especially in winter. Dissolved oxygen was well below saturation (65%) near sewage and runoff inputs in the western part of the lagoon during summer. Classification in accordance with EEA (2001) guidelines suggests the system is of "poor" or "bad" quality in terms of nitrogen concentrations in the eastern zone during the winter rainy period. In terms of phosphate concentrations, the majority of the stations fall into the "good" category, with only two stations (close to the sewage and runoff inputs) classed as "bad". In both cases, the raw nitrogen levels make the lagoon a P-limited system, especially in the eastern part. There was wide space-time variability in chlorophyll a concentrations, which ranged from 0.25 to 56 μg l -1. No relationships between chlorophyll a and nutrients were found, suggesting that autotrophic biomass may be controlled by a large number of internal and external forcing factors driving eutrophication processes. Water quality for this type of environment depends heavily on pressure from human activities but also on the management of sewage treatment plants, agricultural practices and the channels connecting the lagoon with the sea.

Transcriptome analysis of the Populus trichocarpa-Rhizophagus irregularis Mycorrhizal Symbiosis: Regulation of Plant and Fungal Transportomes under Nitrogen Starvation.

PubMed

Calabrese, Silvia; Kohler, Annegret; Niehl, Annette; Veneault-Fourrey, Claire; Boller, Thomas; Courty, Pierre-Emmanuel

2017-06-01

Nutrient transfer is a key feature of the arbuscular mycorrhizal (AM) symbiosis. Valuable mineral nutrients are transferred from the AM fungus to the plant, increasing its fitness and productivity, and, in exchange, the AM fungus receives carbohydrates as an energy source from the plant. Here, we analyzed the transcriptome of the Populus trichocarpa-Rhizophagus irregularis symbiosis using RNA-sequencing of non-mycorrhizal or mycorrhizal fine roots, with a focus on the effect of nitrogen (N) starvation. In R. irregularis, we identified 1,015 differentially expressed genes, whereby N starvation led to a general induction of gene expression. Genes of the functional classes of cell growth, membrane biogenesis and cell structural components were highly abundant. Interestingly, N starvation also led to a general induction of fungal transporters, indicating increased nutrient demand upon N starvation. In non-mycorrhizal P. trichocarpa roots, 1,341 genes were differentially expressed under N starvation. Among the 953 down-regulated genes in N starvation, most were involved in metabolic processes including amino acids, carbohydrate and inorganic ion transport, while the 342 up-regulated genes included many defense-related genes. Mycorrhization led to the up-regulation of 549 genes mainly involved in secondary metabolite biosynthesis and transport; only 24 genes were down-regulated. Mycorrhization specifically induced expression of three ammonium transporters and one phosphate transporter, independently of the N conditions, corroborating the hypothesis that these transporters are important for symbiotic nutrient exchange. In conclusion, our data establish a framework of gene expression in the two symbiotic partners under high-N and low-N conditions. © The Author 2017. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Fronts and eddies: Engines for biogeochemical variability of the Central Red Sea during winter-spring periods

NASA Astrophysics Data System (ADS)

Zarokanellos, Nikolaos; Jones, Burton

2017-04-01

The central Red Sea (CRS) has been shown to be characterized by significant eddy activity throughout the year. In winter, weakened stratification may lead to enhanced vertical exchange contributing to physical and biogeochemical processes. In winter 2014-2015 we began an extended glider time series to monitor a region in the northern CRS where eddy activity is significant. Remote sensing and glider observations that include CTD, oxygen, CDOM and chlorophyll fluorescence, and multi-wavelength optical backscatter, have been used to characterize the effects of winter mixing and eddy activity in this region. During winter, deep mixing driven by surface cooling and strong winds combined with eddy features, can supply nutrients into the upper layer dramatically modifies the environment from its typically stratified conditions. These mixing events disperse the phytoplankton from the deep chlorophyll maximum throughout the upper mixed layer, and increase the chlorophyll signature detected by ocean color imagery. In addition to the mixing, cyclonic eddies in the region can enhance the vertical displacement of deeper, nutrient containing water toward the euphotic zone contributing to increased chlorophyll concentration and biological productivity. Remote sensing analyses indicate that these eddies also contribute to significant horizontal dispersion including the exchange between the open sea and coastal coral reef ecosystems. During the winter mixing periods, diel fluctuations in phytoplankton biomass have been observed indicative of solar driven plankton dynamics. The biogeochemical response to the subsurface physical processes provides a sensitive indicator to the processes that result from the mixing and eddy dynamics - processes that are not necessarily detectable via remote sensing. In order to understand the seasonal responses, but also the interannual influences on these processes, sustained in situ autonomous platform measurements are essential.

Non-invasive monitoring and modelling of the root active zones: progresses, caveats and outlook.

NASA Astrophysics Data System (ADS)

Cassiani, G.; Putti, M.; Boaga, J.; Busato, L.; Vanella, D.; Consoli, S.

2016-12-01

Roots play a fundamental role in soil-plant-atmosphere interactions as they not only control water and nutrient exchanges necessary for plant sustenance, but also largely contribute, through the plant system, to the mass and energy exchanges between soil and atmosphere. Therefore understanding root zone processes is of major importance not only for crop management but also for wider scale catchment and global issues. Geophysical methods can greatly contribute to imaging the root zone geometry and processes, provided that high-resolution, time-lapse measurements are set up, and provided that the survey design takes into due considerations the expected processes to be imaged. In this respect, modelling and monitoring go hand in hand not only a-posteriori to try and interpret the data, but also a-priori in the attempt to optimise monitoring strategies. In this work we present a few case studies concerning root monitoring using ERT with the support of ancillary data of hydrological and physiological nature. Different degrees of integration with modelling will be presented, with the aim of showing how a full Data Assimilation scheme can be built. In addition, the results will help address fundamental questions such as: (a) is root growth controlled by optimality principles under the constraints posed by soil hydraulic and mechanical properties, by water and nutrient availability and by plant competition? (b) is the optimality above also controlling the dynamic processing of root adaptation to changing constraints? (c) to what extent can these processes of soil-plant interaction be monitored in controlled conditions as well as in true-life environments? These questions, and the availability of ever advancing modelling and monitoring capabilities, are likely to develop into a growing and exciting field of research.

A data base of crop nutrient use, water use, and carbon dioxide exchange in a 2O square meter growth chamber: I. Wheat as a case study

NASA Technical Reports Server (NTRS)

Wheeler, R. M.; Berry, W. L.; Mackowiak, C.; Corey, K. A.; Sager, J. C.; Heeb, M. M.; Knott, W. M.

1993-01-01

A data set is given describing the daily nutrient uptake, gas exchange, environmental conditions, and carbon (C), and nutrient partitioning at harvest for the entire canopy and root system of a wheat crop (Triticum aestivum, cv. Yecora Rojo). The data were obtained from a 20 m2 stand of wheat plants grown from planting to maturity in a closed, controlled environment, and include daily nutrient uptake [macronutrients, nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), and sulfur (S); and micronutrients, iron (Fe), boron (B), manganese (Mn), zinc (Zn), copper (Cu), and molybdenum (Mo)], canopy carbon dioxide (CO2) exchange rates, and transpiration. Environmental factors such as relative humidity, air temperature, nutrient solution temperature, pH and electrical conductivity, and photoperiod were controlled in the chamber to specific set points. A detailed description of biomass yield for each of the 64 plant growth trays comprising the 20 m2 of growth area is also provided, and includes dry weights of grain, straw, chaff, and roots, along with the concentration of nutrients in different plant tissues and the percent carbohydrate, fat, and protein. To our knowledge, this information represents one of the most extensive data sets available for a canopy of wheat grown from seed to maturity under controlled environmental and nutritional conditions, and thus may provide useful information for model development and validation. A methods section is included to qualify any assumptions that might be required for the use of the data in plant growth models, along with a daily event calendar indicating when adjustments in set points and occasional equipment or sensor failures occurred.

A Data Base of Crop Nutrient Use, Water Use, and Carbon Dioxide Exchange in a 20 Square Meter Growth Chamber. Part 1; Wheat as a Case Study

NASA Technical Reports Server (NTRS)

Wheeler, Raymond M.; Berry, Wade L.; Mackowiak, Cheryl; Corey, Kenneth A.; Sager, John C.; Heeb, Margaret M.; Knott, William M.

1993-01-01

A data set is given describing the daily nutrient uptake, gas exchange, environmental conditions, and carbon (C), and nutrient partitioning at harvest for the entire canopy and root system of a wheat crop (Triticum aestivum, cv. Yecora Rojo). The data were obtained from a 20 sq m stand of wheat plants grown from planting to maturity in a closed, controlled environment, and include daily nutrient uptake [macronutrients, nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), and sulfur (S); and micronutrients, iron (Fe), boron (B), manganese (Mn), zinc (Zn), copper (Cu), and molybdenum (Mo)], canopy carbon dioxide (CO2) exchange rates, and transpiration. Environmental factors such as relative humidity, air temperature, nutrient solution temperature, pH and electrical conductivity, and photoperiod were controlled in the chamber to specific set points. A detailed description of biomass yield for each of the 64 plant growth trays comprising the 20 sq m of growth area is also provided, and includes dry weights of grain, straw, chaff, and roots, along with the concentration of nutrients in different plant tissues and the percent carbohydrate, fat, and protein. To our knowledge, this information represents one of the most extensive data sets available for a canopy of wheat grown from seed to maturity under controlled environmental and nutritional conditions, and thus may provide useful information for model development and validation. A methods section is included to qualify any assumptions that might he required for the use of the data in plant growth models, along with a daily event calendar indicating when adjustments in set points and occasional equipment or sensor failures occurred.

Modeling brine and nutrient dynamics in Antarctic sea ice: the case of dissolved silica

NASA Astrophysics Data System (ADS)

Vancoppenolle, M.; Goosse, H.; de Montety, A.; Fichefet, T.; Tremblay, B.; Tison, J.

2009-12-01

Sea ice ecosystems are characterized by micro-algae living in brine inclusions. The growth rate of ice algae depends on light and nutrient supply. Here, the interactions between nutrients and brine dynamics under the influence of algae are investigated using a one-dimensional model. The model includes snow and ice thermodynamics with brine physics and an idealized sea ice biological component, characterized by one nutrient, namely dissolved silica (DSi). In the model, DSi follows brine motion and is consumed by ice algae. Depending on physical ice characteristics, the brine flow is either advective, diffusive or turbulent. The vertical profiles of ice salinity and DSi concentration are solutions of advection-diffusion equations. The model is configured to simulate the typical thermodynamic regimes of first-year Antarctic pack ice. The simulated vertical profiles of salinity and DSi qualitatively reproduce observations. Analysis of results highlights the role of convection in the lowermost 5-10 cm of ice. Convection mixes saline, nutrient-poor brine with comparatively fresh, nutrient-rich seawater. This implies a rejection of salt to the ocean and a flux of DSi to the ice. In presence of growing algae, the simulated ocean-to-ice DSi flux increases by 0-115% compared to an abiotic situation. In turn, primary production and brine convection act in synergy to form a nutrient pump. The other important processes are the flooding of the surface by seawater and the percolation of meltwater. The former refills nutrients near the ice surface in spring. The latter, if present, tends to expell nutrients from the ice in summer. Sketch of salt (left) and nutrient (right) exchanges at the ice-ocean interface proposed in this paper.

The seasonal sea-ice zone in the glacial Southern Ocean as a carbon sink.

PubMed

Abelmann, Andrea; Gersonde, Rainer; Knorr, Gregor; Zhang, Xu; Chapligin, Bernhard; Maier, Edith; Esper, Oliver; Friedrichsen, Hans; Lohmann, Gerrit; Meyer, Hanno; Tiedemann, Ralf

2015-09-18

Reduced surface-deep ocean exchange and enhanced nutrient consumption by phytoplankton in the Southern Ocean have been linked to lower glacial atmospheric CO2. However, identification of the biological and physical conditions involved and the related processes remains incomplete. Here we specify Southern Ocean surface-subsurface contrasts using a new tool, the combined oxygen and silicon isotope measurement of diatom and radiolarian opal, in combination with numerical simulations. Our data do not indicate a permanent glacial halocline related to melt water from icebergs. Corroborated by numerical simulations, we find that glacial surface stratification was variable and linked to seasonal sea-ice changes. During glacial spring-summer, the mixed layer was relatively shallow, while deeper mixing occurred during fall-winter, allowing for surface-ocean refueling with nutrients from the deep reservoir, which was potentially richer in nutrients than today. This generated specific carbon and opal export regimes turning the glacial seasonal sea-ice zone into a carbon sink.

The seasonal sea-ice zone in the glacial Southern Ocean as a carbon sink

PubMed Central

Abelmann, Andrea; Gersonde, Rainer; Knorr, Gregor; Zhang, Xu; Chapligin, Bernhard; Maier, Edith; Esper, Oliver; Friedrichsen, Hans; Lohmann, Gerrit; Meyer, Hanno; Tiedemann, Ralf

2015-01-01

Reduced surface–deep ocean exchange and enhanced nutrient consumption by phytoplankton in the Southern Ocean have been linked to lower glacial atmospheric CO2. However, identification of the biological and physical conditions involved and the related processes remains incomplete. Here we specify Southern Ocean surface–subsurface contrasts using a new tool, the combined oxygen and silicon isotope measurement of diatom and radiolarian opal, in combination with numerical simulations. Our data do not indicate a permanent glacial halocline related to melt water from icebergs. Corroborated by numerical simulations, we find that glacial surface stratification was variable and linked to seasonal sea-ice changes. During glacial spring–summer, the mixed layer was relatively shallow, while deeper mixing occurred during fall–winter, allowing for surface-ocean refueling with nutrients from the deep reservoir, which was potentially richer in nutrients than today. This generated specific carbon and opal export regimes turning the glacial seasonal sea-ice zone into a carbon sink. PMID:26382319

How membranes shape plant symbioses: signaling and transport in nodulation and arbuscular mycorrhiza

PubMed Central

Bapaume, Laure; Reinhardt, Didier

2012-01-01

As sessile organisms that cannot evade adverse environmental conditions, plants have evolved various adaptive strategies to cope with environmental stresses. One of the most successful adaptations is the formation of symbiotic associations with beneficial microbes. In these mutualistic interactions the partners exchange essential nutrients and improve their resistance to biotic and abiotic stresses. In arbuscular mycorrhiza (AM) and in root nodule symbiosis (RNS), AM fungi and rhizobia, respectively, penetrate roots and accommodate within the cells of the plant host. In these endosymbiotic associations, both partners keep their plasma membranes intact and use them to control the bidirectional exchange of signaling molecules and nutrients. Intracellular accommodation requires the exchange of symbiotic signals and the reprogramming of both interacting partners. This involves fundamental changes at the level of gene expression and of the cytoskeleton, as well as of organelles such as plastids, endoplasmic reticulum (ER), and the central vacuole. Symbiotic cells are highly compartmentalized and have a complex membrane system specialized for the diverse functions in molecular communication and nutrient exchange. Here, we discuss the roles of the different cellular membrane systems and their symbiosis-related proteins in AM and RNS, and we review recent progress in the analysis of membrane proteins involved in endosymbiosis. PMID:23060892

Toward a universal mass-momentum transfer relationship for predicting nutrient uptake and metabolite exchange in benthic reef communities

NASA Astrophysics Data System (ADS)

Falter, James L.; Lowe, Ryan J.; Zhang, Zhenlin

2016-09-01

Here we synthesize data from previous field and laboratory studies describing how rates of nutrient uptake and metabolite exchange (mass transfer) are related to form drag and bottom stresses (momentum transfer). Reanalysis of this data shows that rates of mass transfer are highly correlated (r2 ≥ 0.9) with the root of the bottom stress (τbot0.4) under both waves and currents and only slightly higher under waves (~10%). The amount of mass transfer that can occur per unit bottom stress (or form drag) is influenced by morphological features ranging anywhere from millimeters to meters in scale; however, surface-scale roughness (millimeters) appears to have little effect on actual nutrient uptake by living reef communities. Although field measurements of nutrient uptake by natural reef communities agree reasonably well with predictions based on existing mass-momentum transfer relationships, more work is needed to better constrain these relationships for more rugose and morphologically complex communities.

Common mycorrhizal networks and their effect on the bargaining power of the fungal partner in the arbuscular mycorrhizal symbiosis.

PubMed

Bücking, Heike; Mensah, Jerry A; Fellbaum, Carl R

2016-01-01

Arbuscular mycorrhizal (AM) fungi form mutualistic interactions with the majority of land plants, including some of the most important crop species. The fungus takes up nutrients from the soil, and transfers these nutrients to the mycorrhizal interface in the root, where these nutrients are exchanged against carbon from the host. AM fungi form extensive hyphal networks in the soil and connect with their network multiple host plants. These common mycorrhizal networks (CMNs) play a critical role in the long-distance transport of nutrients through soil ecosystems and allow the exchange of signals between the interconnected plants. CMNs affect the survival, fitness, and competitiveness of the fungal and plant species that interact via these networks, but how the resource transport within these CMNs is controlled is largely unknown. We discuss the significance of CMNs for plant communities and for the bargaining power of the fungal partner in the AM symbiosis.

Relationships among net primary productivity, nutrients and climate in tropical rain forest: A pan-tropical analysis

USGS Publications Warehouse

Cleveland, Cory C.; Townsend, Alan R.; Taylor, Philip; Alvarez-Clare, Silvia; Bustamante, Mercedes M.C.; Chuyong, George; Dobrowski, Solomon Z.; Grierson, Pauline; Harms, Kyle E.; Houlton, Benjamin Z.; Marklein, Alison; Parton, William; Porder, Stephen; Reed, Sasha C.; Sierra, Carlos A.; Silver, Whendee L.; Tanner, Edmund V.J.; Wieder, William R.

2011-01-01

Tropical rain forests play a dominant role in global biosphere-atmosphere CO2 exchange. Although climate and nutrient availability regulate net primary production (NPP) and decomposition in all terrestrial ecosystems, the nature and extent of such controls in tropical forests remain poorly resolved. We conducted a meta-analysis of carbon-nutrient-climate relationships in 113 sites across the tropical forest biome. Our analyses showed that mean annual temperature was the strongest predictor of aboveground NPP (ANPP) across all tropical forests, but this relationship was driven by distinct temperature differences between upland and lowland forests. Within lowland forests (< 1000 m), a regression tree analysis revealed that foliar and soil-based measurements of phosphorus (P) were the only variables that explained a significant proportion of the variation in ANPP, although the relationships were weak. However, foliar P, foliar nitrogen (N), litter decomposition rate (k), soil N and soil respiration were all directly related with total surface (0–10 cm) soil P concentrations. Our analysis provides some evidence that P availability regulates NPP and other ecosystem processes in lowland tropical forests, but more importantly, underscores the need for a series of large-scale nutrient manipulations – especially in lowland forests – to elucidate the most important nutrient interactions and controls.

Transport properties and regulatory roles of nitrogen in arbuscular mycorrhizal symbiosis.

PubMed

Chen, Aiqun; Gu, Mian; Wang, Shuangshuang; Chen, Jiadong; Xu, Guohua

2018-02-01

Many terrestrial plants can form root symbiosis with beneficial microorganisms for enhancing uptake of mineral nutrients or increasing fitness to adverse environmental challenges. Arbuscular mycorrhizal (AM) symbiosis that is formed by AM fungi and the roots of vascular flowering plants is the most widespread mutualistic associations in nature. As a typical endosymbiosis, AM interactions involves the differentiation of both symbionts to create novel symbiotic interfaces within the root cells, and requires a continuous nutrient exchange between the two partners. AM plants have two pathways for nutrient uptake, either direct uptake via the root hairs and root epidermis at the plant-soil interface, or indirectly through the AM fungal hyphae at the plant-fungus interface. Over the last few years, great progress has been made in deciphering the mechanisms underlying the AM-mediated modulation of nutrient uptake processes, and an increasing number of plant and fungal genes responsible for transporting nutrients from the soil or across the intraradical symbiotic interfaces have been identified and functionally characterized. Here, we summarize the recent advances in the nitrogen uptake, assimilation and translocation in the AM symbiosis, and also explore the current understanding of how the N status and interplay with C and P in modulating the development of AM associations. Copyright © 2017. Published by Elsevier Ltd.

Biomass production, anaerobic digestion, and nutrient recycling of small benthic or floating seaweeds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ryther, J.H.

1982-02-01

A number of experiments have been carried out supporting the development of a seaweed-based ocean energy farm. Beginning in 1976, forty-two species of seaweed indigenous to the coastal waters of Central Florida were screened for high biomass yields in intensive culture. Gracilaria tikvahiae achieved the highest annual yield of 34.8 g dry wt/m/sup 2/ day. Yield has been found to vary inversely with seawater exchange rate, apparently because of carbon dioxide limitation at low exchange rates. Gracilaria was anaerobically digested in 120 liter and 2 liter reactors. Gas yields in the large digesters averaged 0.4 1/g volatile solids (.24 1more » CH/sub 4//gv.s.) with a bioconversion efficiency of 48%. Studies of the suitability of digester residue as a nutrient source for growing Gracilaria have been conducted. Nitrogen recycling efficiency from harvested plant through liquid digestion residue to harvested plant approached 75%. Studies of nutrient uptake and storage by Gracilaria, Ascophyllum, and Sargassum showed that nutrient starved plants are capable of rapidly assimilating and storing inorganic nutrients which may be used later for growth when no nutrients are present in the medium. A shallow water seaweed farm was proposed which would produce methane from harvested seaweed and use digester residues as a concentrated source of nutrients for periodic fertilizations.« less

Removing Constraints on the Biomass Production of Freshwater Macroalgae by Manipulating Water Exchange to Manage Nutrient Flux

PubMed Central

Cole, Andrew J.; de Nys, Rocky; Paul, Nicholas A.

2014-01-01

Freshwater macroalgae represent a largely overlooked group of phototrophic organisms that could play an important role within an industrial ecology context in both utilising waste nutrients and water and supplying biomass for animal feeds and renewable chemicals and fuels. This study used water from the intensive aquaculture of freshwater fish (Barramundi) to examine how the biomass production rate and protein content of the freshwater macroalga Oedogonium responds to increasing the flux of nutrients and carbon, by either increasing water exchange rates or through the addition of supplementary nitrogen and CO2. Biomass production rates were highest at low flow rates (0.1–1 vol.day−1) using raw pond water. The addition of CO2 to cultures increased biomass production rates by between 2 and 25% with this effect strongest at low water exchange rates. Paradoxically, the addition of nitrogen to cultures decreased productivity, especially at low water exchange rates. The optimal culture of Oedogonium occurred at flow rates of between 0.5–1 vol.day−1, where uptake rates peaked at 1.09 g.m−2.day−1 for nitrogen and 0.13 g.m−2.day−1 for phosphorous. At these flow rates Oedogonium biomass had uptake efficiencies of 75.2% for nitrogen and 22.1% for phosphorous. In this study a nitrogen flux of 1.45 g.m−2.day−1 and a phosphorous flux of 0.6 g.m−2.day−1 was the minimum required to maintain the growth of Oedogonium at 16–17 g DW.m−2.day−1 and a crude protein content of 25%. A simple model of minimum inputs shows that for every gram of dry weight biomass production (g DW.m−2.day−1), Oedogonium requires 0.09 g.m−2.day−1 of nitrogen and 0.04 g.m−2.day−1 of phosphorous to maintain growth without nutrient limitation whilst simultaneously maintaining a high-nutrient uptake rate and efficiency. As such the integrated culture of freshwater macroalgae with aquaculture for the purposes of nutrient recovery is a feasible solution for the bioremediation of wastewater and the supply of a protein resource. PMID:25000501

Removing constraints on the biomass production of freshwater macroalgae by manipulating water exchange to manage nutrient flux.

PubMed

Cole, Andrew J; de Nys, Rocky; Paul, Nicholas A

2014-01-01

Freshwater macroalgae represent a largely overlooked group of phototrophic organisms that could play an important role within an industrial ecology context in both utilising waste nutrients and water and supplying biomass for animal feeds and renewable chemicals and fuels. This study used water from the intensive aquaculture of freshwater fish (Barramundi) to examine how the biomass production rate and protein content of the freshwater macroalga Oedogonium responds to increasing the flux of nutrients and carbon, by either increasing water exchange rates or through the addition of supplementary nitrogen and CO2. Biomass production rates were highest at low flow rates (0.1-1 vol.day-1) using raw pond water. The addition of CO2 to cultures increased biomass production rates by between 2 and 25% with this effect strongest at low water exchange rates. Paradoxically, the addition of nitrogen to cultures decreased productivity, especially at low water exchange rates. The optimal culture of Oedogonium occurred at flow rates of between 0.5-1 vol.day-1, where uptake rates peaked at 1.09 g.m-2.day-1 for nitrogen and 0.13 g.m-2.day-1 for phosphorous. At these flow rates Oedogonium biomass had uptake efficiencies of 75.2% for nitrogen and 22.1% for phosphorous. In this study a nitrogen flux of 1.45 g.m-2.day-1 and a phosphorous flux of 0.6 g.m-2.day-1 was the minimum required to maintain the growth of Oedogonium at 16-17 g DW.m-2.day-1 and a crude protein content of 25%. A simple model of minimum inputs shows that for every gram of dry weight biomass production (g DW.m-2.day-1), Oedogonium requires 0.09 g.m-2.day-1 of nitrogen and 0.04 g.m-2.day-1 of phosphorous to maintain growth without nutrient limitation whilst simultaneously maintaining a high-nutrient uptake rate and efficiency. As such the integrated culture of freshwater macroalgae with aquaculture for the purposes of nutrient recovery is a feasible solution for the bioremediation of wastewater and the supply of a protein resource.

Carbon, nutrient and trace metal cycling in sandy sediments: A comparison of high-energy beaches and backbarrier tidal flats

NASA Astrophysics Data System (ADS)

Reckhardt, Anja; Beck, Melanie; Seidel, Michael; Riedel, Thomas; Wehrmann, Achim; Bartholomä, Alexander; Schnetger, Bernhard; Dittmar, Thorsten; Brumsack, Hans-Jürgen

2015-06-01

In order to evaluate the importance of coastal sandy sediments and their contribution to carbon, nutrient and metal cycling we investigated two beach sites on Spiekeroog Island, southern North Sea, Germany, and a tidal flat margin, located in Spiekeroog's backbarrier area. We also analyzed seawater and fresh groundwater on Spiekeroog Island, to better define endmember concentrations, which influence our study sites. Intertidal sandy flats and beaches are characterized by pore water advection. Seawater enters the sediment during flood and pore water drains out during ebb and at low tide. This pore water circulation leads to continuous supply of fresh organic substrate to the sediments. Remineralization products of microbial degradation processes, i.e. nutrients, and dissolved trace metals from the reduction of particulate metal oxides, are enriched in the pore water compared to open seawater concentrations. The spatial distribution of dissolved organic carbon (DOC), nutrients (PO43-, NO3-, NO2-, NH4+, Si(OH)4 and total alkalinity), trace metals (dissolved Fe and Mn) as well as sulfate suggests that the exposed beach sites are subject to relatively fast pore water advection, which leads to organic matter and oxygen replenishment. Frequent pore water exchange further leads to comparatively low nutrient concentrations. Sulfate reduction does not appear to play a major role during organic matter degradation. High nitrate concentrations indicate that redox conditions are oxic within the duneward freshwater influenced section, while ammonification, denitrification, manganese and iron reduction seem to prevail in the ammonium-dominated seawater circulation zone. In contrast, the sheltered tidal flat margin site exhibits a different sedimentology (coarser beach sands versus finer tidal flat sands) and nutrients, dissolved manganese and DOC accumulate in the pore water. Ammonium is the dominant pore water nitrogen species and intense sulfate reduction leads to the formation of sulfide, which precipitates dissolved iron as iron sulfide. These findings are due to slower advective pore water exchange in the tidal flat sediments. This study illustrates how different energy regimes affect biogeochemical cycling in intertidal permeable sediments.

Influences of Coupled Hydrologic and Microbial Processes on River Corridor Biogeochemistry and Ecology

NASA Astrophysics Data System (ADS)

Scheibe, T. D.; Song, H. S.; Stegen, J.; Graham, E.; Bao, J.; Goldman, A.; Zhou, T.; Crump, A.; Hou, Z.; Hammond, G. E.; Chen, X.; Huang, M.; Zhang, X.; Nelson, W. C.; Garayburu-Caruso, V. A.

2017-12-01

The exchange of water between rivers and surrounding subsurface environments (hydrologic exchange flows or HEFs) is a vital aspect of river ecology and watershed function. HEFs play a key role in water quality, nutrient cycling, and ecosystem health, and they modulate water temperatures and enhance exchange of terrestrial and aquatic nutrients, which lead to elevated biogeochemical activity. However, these coupled hydrologic and microbiological processes are not well understood, particularly in the context of large managed river systems with highly variable discharge, and are poorly represented in system-scale quantitative models. Using the 75 km Hanford Reach of the Columbia River as the research domain, we apply high-resolution flow simulations supported by field observations to understand how variable river discharge interacts with hydromorphic and hydrogeologic structures to generate HEFs and distributions of subsurface residence times. We combine this understanding of hydrologic processes with microbiological activity measurements and reactive transport models to elucidate the holistic impacts of variable discharge on river corridor (surface and subsurface) ecosystems. In particular, our project seeks to develop and test new conceptual and numerical models that explicitly incorporate i) the character (chemical speciation and thermodynamics) of natural organic matter as it varies along flow paths and through mixing of groundwater and surface water, and ii) the history-dependent response of microbial communities to varying time scales of inundation associated with fluctuations in river discharge. The results of these high-resolution mechanistic models are guiding formulation and parameterization of reduced-order models applicable at reach to watershed scales. New understanding of coupled hydrology and microbiology in the river corridor will play a key role in reduction of uncertainties associated with major Earth system biogeochemical fluxes, improving predictions of environmental and human impacts on water quality and riverine ecosystems, and supporting environmentally responsible management of linked energy-water systems.

Unity in diversity: structural and functional insights into the ancient partnerships between plants and fungi.

PubMed

Field, Katie J; Pressel, Silvia

2018-04-26

Contents I. II. III. IV. V. VI. VII. VIII. References SUMMARY: Mycorrhizal symbiosis is an ancient and widespread mutualism between plants and fungi that facilitated plant terrestrialisation > 500 million years ago, with key roles in ecosystem functioning at multiple scales. Central to the symbiosis is the bidirectional exchange of plant-fixed carbon for fungal-acquired nutrients. Within this unifying role of mycorrhizas, considerable diversity in structure and function reflects the diversity of the partners involved. Early diverging plants form mutualisms not only with arbuscular mycorrhizal Glomeromycotina fungi, but also with poorly characterised Mucoromycotina, which may also colonise the roots of 'higher' plants as fine root endophytes. Functional diversity in these symbioses depends on both fungal and plant life histories and is influenced by the environment. Recent studies have highlighted the roles of lipids/fatty acids in plant-to-fungus carbon transport and potential contributions of Glomeromycotina fungi to plant nitrogen nutrition. Together with emerging appreciation of mycorrhizal networks as multi-species resource-sharing systems, these insights are broadening our views on mycorrhizas and their roles in nutrient cycling. It is crucial that the diverse array of biotic and abiotic factors that together shape the dynamics of carbon-for-nutrient exchange between plants and fungi are integrated, in addition to embracing the unfolding and potentially key role of Mucoromycotina fungi in these processes. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Developing and using artificial soils to analyze soil microbial processes

NASA Astrophysics Data System (ADS)

Gao, X.; Cheng, H. Y.; Boynton, L.; Masiello, C. A.; Silberg, J. J.

2017-12-01

Microbial diversity and function in soils are governed by soil characteristics such as mineral composition, particles size and aggregations, soil organic matter (SOM), and availability of nutrients and H2O. The spatial and temporal heterogeneity of soils creates a range of niches (hotspots) differing in the availability of O2, H2O, and nutrients, which shapes microbial activities at scales ranging from nanometer to landscape. Synthetic biologists often examine microbial response trigged by their environment conditions in nutrient-rich aqueous media using single strain microbes. While these studies provided useful insight in the role of soil microbes in important soil biogeochemical processes (e.g., C cycling, N cycling, etc.), the results obtained from the over-simplified model systems are often not applicable natural soil systems. On the contrary, soil microbiologists examine microbial processes in natural soils using longer incubation time. However, due to its physical, chemical and biological complexity of natural soils, it is often difficult to examine soil characteristics independently and understand how each characteristic influences soil microbial activities and their corresponding soil functioning. Therefore, it is necessary to bridge the gap and develop a model matrix to exclude unpredictable influences from the environment while still reliably mimicking real environmental conditions. The objective of this study is to design a range of ecologically-relevant artificial soils with varying texture (particle size distribution), structure, mineralogy, SOM content, and nutrient heterogeneity. We thoroughly characterize the artificial soils for pH, active surface area and surface morphology, cation exchange capacity (CEC), and water retention curve. We demonstrate the effectiveness of the artificial soils as useful matrix for microbial processes, such as microbial growth and horizontal gene transfer (HGT), using the gas-reporting biosensors recently developed in our lab.

Changes in biogeochemical cycling following forest defoliation by pine wilt disease in Kiryu experimental catchment in Japan

NASA Astrophysics Data System (ADS)

Tokuchi, Naoko; Ohte, Nobuhito; Hobara, Satoru; Kim, Su-Jin; Masanori, Katsuyama

2004-10-01

Changes in nutrient budgets and hydrological processes due to the natural disturbance of pine wilt disease (PWD) were monitored in a small, forested watershed in Japan. The disturbance caused changes in soil nitrogen transformations. Pre-disturbance, mineralized nitrogen remained in the form of NH4+, whereas in disturbed areas most mineralized nitrogen was nitrified. Stream NO3- concentrations increased following PWD. There was a delay between time of disturbance and the increase of NO3- in ground and stream waters. Stream concentrations of NO3- and cations (Ca2+ + Mg2+) were significantly correlated from 1994 to 1996, whereas the correlation among NO3-, H+, and SO42- was significant only in 1995. Although both cation exchange and SO42- adsorption buffered protons, cation exchange was the dominant and continuous mechanism for acid buffering. SO42- adsorption was variable and highly pH dependent. The disturbance also resulted in slight delayed changes of input-output nutrient balances. The nitrogen contribution to PWD litter inputs was 7.39 kmol ha-1, and nitrogen loss from streamwater was less than 0.5 kmol ha-1 year-1 throughout the observation period. This large discrepancy suggested substantial nitrogen immobilization.

Tidal pumping drives nutrient and dissolved organic matter dynamics in a Gulf of Mexico subterranean estuary

NASA Astrophysics Data System (ADS)

Santos, Isaac R.; Burnett, William C.; Dittmar, Thorsten; Suryaputra, I. G. N. A.; Chanton, Jeffrey

2009-03-01

We hypothesize that nutrient cycling in a Gulf of Mexico subterranean estuary (STE) is fueled by oxygen and labile organic matter supplied by tidal pumping of seawater into the coastal aquifer. We estimate nutrient production rates using the standard estuarine model and a non-steady-state box model, separate nutrient fluxes associated with fresh and saline submarine groundwater discharge (SGD), and estimate offshore fluxes from radium isotope distributions. The results indicate a large variability in nutrient concentrations over tidal and seasonal time scales. At high tide, nutrient concentrations in shallow beach groundwater were low as a result of dilution caused by seawater recirculation. During ebb tide, the concentrations increased until they reached a maximum just before the next high tide. The dominant form of nitrogen was dissolved organic nitrogen (DON) in freshwater, nitrate in brackish waters, and ammonium in saline waters. Dissolved organic carbon (DOC) production was two-fold higher in the summer than in the winter, while nitrate and DON production were one order of magnitude higher. Oxic remineralization and denitrification most likely explain these patterns. Even though fresh SGD accounted for only ˜5% of total volumetric additions, it was an important pathway of nutrients as a result of biogeochemical inputs in the mixing zone. Fresh SGD transported ˜25% of DOC and ˜50% of total dissolved nitrogen inputs into the coastal ocean, with the remainder associated with a one-dimensional vertical seawater exchange process. While SGD volumetric inputs are similar seasonally, changes in the biogeochemical conditions of this coastal plain STE led to higher summertime SGD nutrient fluxes (40% higher for DOC and 60% higher for nitrogen in the summer compared to the winter). We suggest that coastal primary production and nutrient dynamics in the STE are linked.

Nutrient Exchange and Regulation in Arbuscular Mycorrhizal Symbiosis.

PubMed

Wang, Wanxiao; Shi, Jincai; Xie, Qiujin; Jiang, Yina; Yu, Nan; Wang, Ertao

2017-09-12

Most land plants form symbiotic associations with arbuscular mycorrhizal (AM) fungi. These are the most common and widespread terrestrial plant symbioses, which have a global impact on plant mineral nutrition. The establishment of AM symbiosis involves recognition of the two partners and bidirectional transport of different mineral and carbon nutrients through the symbiotic interfaces within the host root cells. Intriguingly, recent discoveries have highlighted that lipids are transferred from the plant host to AM fungus as a major carbon source. In this review, we discuss the transporter-mediated transfer of carbon, nitrogen, phosphate, potassium and sulfate, and present hypotheses pertaining to the potential regulatory mechanisms of nutrient exchange in AM symbiosis. Current challenges and future perspectives on AM symbiosis research are also discussed. Copyright © 2017 The Author. Published by Elsevier Inc. All rights reserved.

Associations between maternal early pregnancy body mass index (BMI) and placental DNA methylation at term

USDA-ARS?s Scientific Manuscript database

The placenta serves as the definitive maternal-fetal interface and mediates exchange of nutrients, gases, and waste between mother and the developing fetus. The placenta integrates signals from both mother and baby, coordinating maternal nutrient supply with fetal demand and development. In epidemio...

The effect of fire on soil properties

Treesearch

Leonard F. DeBano

1991-01-01

Fire affects nutrient cycling and the physical, chemical, and biological properties of soils occupied by western montane forests. Combustion of litter and soil organic matter (OM) increases the availability of some nutrients, although others are volatilized (for example, N, P, S). Soil OM loss also affects cation exchange capacity, organic chelation, aggregate...

Coupled ocean-shelf ecosystem modelling of northern North Atlantic

NASA Astrophysics Data System (ADS)

Harle, J.; Holt, J. T.; Butenschön, M.; Allen, J. I.

2016-02-01

The biogeochemistry and ecosystems of the open-ocean and shelf seas are intimately connected. For example Northwest European continental shelf receives a substantial fraction of its nutrients from the wider North Atlantic and exports carbon at depth, sequestering it from atmospheric exchange. In the EC FP7 EuroBasin project (Holt et al 2014) we have developed a 1/12 degree basin-scale NEMO-ERSEM model with specific features relevant to shelf seas (e.g. tides and advanced vertical mixing schemes). This model is eddy resolving in the open-ocean, and resolves barotropic scales on-shelf. We use this model to explore the interaction between finely resolved physical processes and the ecosystem. Here we focus on shelf-sea processes and the connection between the shelf seas and open-ocean, and compare results with a 1/4 degree (eddy permitting) model that does not include shelf sea processes. We find tidal mixing fronts and river plume are well represented in the 1/12 degree model. Using approaches developed for the NW Shelf (Holt et al 2012), we provide estimates of across-shelf break nutrient fluxes to the seas surrounding this basin, and relate these fluxes and their interannual variability to the physical processes driving ocean-shelf exchange. Holt, J., et al, 2012. Oceanic controls on the primary production of the northwest European continental shelf: model experiments under recent past conditions and a potential future scenario. Biogeosciences 9, 97-117. Holt, J., et al, 2014. Challenges in integrative approaches to modelling the marine ecosystems of the North Atlantic: Physics to Fish and Coasts to Ocean. Progress in Oceanography doi:10.1016/j.pocean.2014.04.024.

Groundwater flow, nutrient, and stable isotope dynamics in the parafluvial-hyporheic zone of the regulated Lower Colorado River (Texas, USA) over the course of a small flood

NASA Astrophysics Data System (ADS)

Briody, Alyse C.; Cardenas, M. Bayani; Shuai, Pin; Knappett, Peter S. K.; Bennett, Philip C.

2016-06-01

Periodic releases from an upstream dam cause rapid stage fluctuations in the Lower Colorado River near Austin, Texas, USA. These daily pulses modulate fluid exchange and residence times in the hyporheic zone where biogeochemical reactions are typically pronounced. The effects of a small flood pulse under low-flow conditions on surface-water/groundwater exchange and biogeochemical processes were studied by monitoring and sampling from two dense transects of wells perpendicular to the river. The first transect recorded water levels and the second transect was used for water sample collection at three depths. Samples were collected from 12 wells every 2 h over a 24-h period which had a 16-cm flood pulse. Analyses included nutrients, carbon, major ions, and stable isotopes of water. The relatively small flood pulse did not cause significant mixing in the parafluvial zone. Under these conditions, the river and groundwater were decoupled, showed potentially minimal mixing at the interface, and did not exhibit any discernible denitrification of river-borne nitrate. The chemical patterns observed in the parafluvial zone can be explained by evaporation of groundwater with little mixing with river water. Thus, large pulses may be necessary in order for substantial hyporheic mixing and exchange to occur. The large regulated river under a low-flow and small flood pulse regime functioned mainly as a gaining river with little hydrologic connectivity beyond a narrow hyporheic zone.

A dynamic leaf gas-exchange strategy is conserved in woody plants under changing ambient CO2: evidence from carbon isotope discrimination in paleo and CO2 enrichment studies

EPA Science Inventory

Rising atmospheric [CO2], ca, is expected to affect stomatal regulation of leaf gas-exchange of woody plants, thus influencing energy fluxes as well as carbon (C), water and nutrient cycling of forests. Researchers have reported that stomata regulate leaf gas-exchange around “set...

Long-term Nutrient Fertilization Increases CO2 Loss in Arctic Tundra

NASA Astrophysics Data System (ADS)

Graham, L. M.; Natali, S.; Rastetter, E. B.; Shaver, G. R.; Risk, D. A.; Loranty, M. M.; Jastrow, J. D.

2015-12-01

As anthropogenic climate change warms the Arctic, organic carbon (C) trapped in permafrost is at an increased risk of being released to the atmosphere as carbon dioxide (CO2). At the same time, higher rates of decomposition may increase nutrient availability and enhance plant growth, leading to an uptake of C that may offset respiratory losses. Arctic tundra ecosystems are highly nitrogen (N) limited, and the indirect effects of warming on nutrient availability will be the most likely outcome of increased temperature on plant productivity. This study aims to understand the effects of nutrient addition on arctic CO2 and H2O exchange in a tundra ecosystem at Toolik Lake Field Station, Alaska. The nutrient addition experiment, which began in 2006, is comprised of 7 fertilization treatments: 0.5, 1, 2, 5, and 10 g m-2 of N as NO3- and NH4+ (1:1) with 0.25, 0.5, 1, 2.5, and 5 g m-2 of phosphorus as PO43-; 5 g m-2 of N as NO3-; 5 g m-2 of N as NH4+, and one control plot. Plot-level CO2 and H2O exchange was measured at 5 light levels 7 times over a four-week period in June and July 2015. We measured ecosystem CO2 and H2O exchange using a rectangular plexiglass chamber (0.49 m2) that was connected to an infrared gas analyzer (LI-840). Other ecosystem variables measured include thaw depth, soil moisture and temperature, and normalized difference vegetation index. After 10 years of nutrient addition, fertilization significantly altered ecosystem C cycling. Soil respiration was greatest in the highest fertilization treatment (2.97 μmol m-2 s-1), increasing linearly with nutrient level at a rate of 0.133 μmol m-2 s-1 per g m-2 of N added (R2=0.914). Net CO2 uptake was greatest under highest fertilization (-2.06 μmol m-2 s-1), decreasing linearly with nutrient addition at a rate of -0.068 μmol m-2 s-1 per g m-2 of N added (R2=0.687). These results suggest that as nutrients become more available under a warmer climate, plant productivity increases may not offset respiratory losses, leading to a positive feedback to global climate.

Ambient groundwater flow diminishes nitrate processing in the hyporheic zone of streams

NASA Astrophysics Data System (ADS)

Azizian, Morvarid; Boano, Fulvio; Cook, Perran L. M.; Detwiler, Russell L.; Rippy, Megan A.; Grant, Stanley B.

2017-05-01

Modeling and experimental studies demonstrate that ambient groundwater reduces hyporheic exchange, but the implications of this observation for stream N-cycling is not yet clear. Here we utilize a simple process-based model (the Pumping and Streamline Segregation or PASS model) to evaluate N-cycling over two scales of hyporheic exchange (fluvial ripples and riffle-pool sequences), ten ambient groundwater and stream flow scenarios (five gaining and losing conditions and two stream discharges), and three biogeochemical settings (identified based on a principal component analysis of previously published measurements in streams throughout the United States). Model-data comparisons indicate that our model provides realistic estimates for direct denitrification of stream nitrate, but overpredicts nitrification and coupled nitrification-denitrification. Riffle-pool sequences are responsible for most of the N-processing, despite the fact that fluvial ripples generate 3-11 times more hyporheic exchange flux. Across all scenarios, hyporheic exchange flux and the Damköhler Number emerge as primary controls on stream N-cycling; the former regulates trafficking of nutrients and oxygen across the sediment-water interface, while the latter quantifies the relative rates of organic carbon mineralization and advective transport in streambed sediments. Vertical groundwater flux modulates both of these master variables in ways that tend to diminish stream N-cycling. Thus, anthropogenic perturbations of ambient groundwater flows (e.g., by urbanization, agricultural activities, groundwater mining, and/or climate change) may compromise some of the key ecosystem services provided by streams.

Mechanism of charged pollutants removal in an ion exchange membrane bioreactor: drinking water denitrification.

PubMed

Velizarov, S; Rodrigues, C M; Reis, M A; Crespo, J G

The mechanism of anionic pollutant removal in an ion exchange membrane bioreactor (IEMB) was studied for drinking water denitrification. This hybrid process combines continuous ion exchange transport (Donnan dialysis) of nitrate and its simultaneous bioreduction to gaseous nitrogen. A nonporous mono-anion permselective membrane precludes direct contact between the polluted water and the denitrifying culture and prevents secondary pollution of the treated water with dissolved nutrients and metabolic products. Complete denitrification may be achieved without accumulation of NO3(-) and NO2(-) ions in the biocompartment. Focus was given to the effect of the concentration of co-ions, counterions, and ethanol on the IEMB performance. The nitrate overall mass transfer coefficient in this hybrid process was found to be 2.8 times higher compared to that in a pure Donnan dialysis process without denitrification. Furthermore, by adjusting the ratio of co-ions between the biocompartment and the polluted water compartment, the magnitude and direction of each individual anion flux can be easily regulated, allowing for flexible process operation and control. Synthetic groundwater containing 135-350 mg NO3(-) L(-1) was treated in the IEMB system. A surface denitrification rate of 33 g NO3(-) per square meter of membrane per day was obtained at a nitrate loading rate of 360 g NO3(-) m(-3)d(-1), resulting in a nitrate removal efficiency of 85%.

Are patterns in nutrient limitation belowground consistent with those aboveground: Results from a 4 million year chronosequence

USGS Publications Warehouse

Reed, S.C.; Vitousek, P.M.; Cleveland, C.C.

2011-01-01

Accurately predicting the effects of global change on net carbon (C) exchange between terrestrial ecosystems and the atmosphere requires a more complete understanding of how nutrient availability regulates both plant growth and heterotrophic soil respiration. Models of soil development suggest that the nature of nutrient limitation changes over the course of ecosystem development, transitioning from nitrogen (N) limitation in 'young' sites to phosphorus (P) limitation in 'old' sites. However, previous research has focused primarily on plant responses to added nutrients, and the applicability of nutrient limitation-soil development models to belowground processes has not been thoroughly investigated. Here, we assessed the effects of nutrients on soil C cycling in three different forests that occupy a 4 million year substrate age chronosequence where tree growth is N limited at the youngest site, co-limited by N and P at the intermediate-aged site, and P limited at the oldest site. Our goal was to use short-term laboratory soil C manipulations (using 14C-labeled substrates) and longer-term intact soil core incubations to compare belowground responses to fertilization with aboveground patterns. When nutrients were applied with labile C (sucrose), patterns of microbial nutrient limitation were similar to plant patterns: microbial activity was limited more by N than by P in the young site, and P was more limiting than N in the old site. However, in the absence of C additions, increased respiration of native soil organic matter only occurred with simultaneous additions of N and P. Taken together, these data suggest that altered nutrient inputs into ecosystems could have dissimilar effects on C cycling above- and belowground, that nutrients may differentially affect of the fate of different soil C pools, and that future changes to the net C balance of terrestrial ecosystems will be partially regulated by soil nutrient status. ?? 2010 US Government.

Soluble dust as source of nutrients to the oceans and the role of humans

NASA Astrophysics Data System (ADS)

Tsigaridis, K.; Kanakidou, M.; Myriokefalitakis, S.; Nikolaou, P.; Daskalakis, N.; Theodosi, C.; Nenes, A.; Mihalopoulos, N.

2014-12-01

Atmospheric deposition of trace constituents, both of natural and anthropogenic origin, can act as a nutrient source into the open ocean and affect marine ecosystem functioning and subsequently the exchange of CO2 between the atmosphere and the global ocean. Dust is known as a major source of nutrients (Fe and P) into the atmosphere, but only a fraction of these nutrients is released in soluble form that can be assimilated by the ecosystems. Dust is also known to enhance N deposition by interacting with anthropogenic pollutants and neutralisation of part of the acidity of the atmosphere by crustal alkaline species. The link between the soluble iron (Fe) and phosphorus (P) atmospheric deposition and atmospheric acidity, as well as anthropogenic sources, is investigated. The global atmospheric Fe, P and N cycle are parameterized in the global 3-D chemical transport model TM4-ECPL. Both primary emissions of total and soluble Fe and P associated with dust and combustion processes are taken into account, as well as inorganic and organic N emissions. The impact of atmospheric acidity on nutrient solubility is parameterised based on experimental findings. The model results are evaluated by comparison with available observations. The impact of air-quality changes on soluble nutrient deposition is studied by performing sensitivity simulations using preindustrial, present and future emission scenarios. The response of the chemical composition of nutrient-containing aerosols to environmental changes is demonstrated and quantified. This work has been supported by ARISTEIA - PANOPLY grant co-financed by European Union (ESF) and Greek national funds NSRF.

Solubility and Cation Exchange Properties of Synthetic Hydroxyapatite and Clinoptilolite Mixtures

NASA Technical Reports Server (NTRS)

Beiersdorfer, Raymond E.; Ming, Douglas W.

2003-01-01

A zeoponic plant growth system is defined as the cultivation of plants in artificial soils, which have zeolites as a major component. These systems: 1) can serve as a controllable and renewable fertilization system to provide plant growth nutrients; 2) can mitigate the adverse effects of contamination due to leaching of highly soluble and concentrated fertilizers; and 3) are being considered as substrates for plant growth in regenerative life-support systems for long-duration space missions. Batch-equilibrium studies of the dissolution and ion-exchange properties of mixtures of naturally-occurring Wyoming clinoptilolite (a zeolite) exchanged with K(+) or NH4(+); and synthetic hydroxyapatite were conducted to determine: 1) the plant availability of the macro-nutrients NH4-N, P, K, Ca, and Mg and 2) the effects of varying the clinoptilolite to hydroxyapatite ratio and the ratio of exchangeable cations (K(+) vs. NH4(+)) on clinoptilolite extraframework sites. The nutrients NH4-N (19.7 to 73.6 mg L(sup -1), P (0.57 to 14.99 mg L(sup- 1), K (14.8 to 104.9 mg L(sup -1), and Mg (0.11 to 6.68mg L(sup -1) are available to plants at sufficient levels. Solution Ca concentrations (0.47 to 3.40 mg L(sup -1) are less than optimal. Solution concentrations of NH4(+), K(+), Ca(2+), and Mg(2+) all decreased with increasing clinoptilolite to hydroxyapatite ratio in the sample. Solution concentrations of phosphorous initially increased, reached a maximum value and then decreased with increasing clinoptilolite to hydroxyapatite ratio in the sample. The NH4(+) -exchanged clinoptilolite is more efficient in dissolving synthetic hydroxyapatite than the K(+) -exchanged clinoptilolite. This suggests that NH4(+), which is less selective at clinoptilolite extraframework sites than K(+) is exchanged more readily by Ca(2+) and thereby enhances the dissolution of the synthetic hydroxyapatite.

The Viking gas exchange experiment results from Chryse and Utopia surface samples

NASA Technical Reports Server (NTRS)

Oyama, V. I.; Berdahl, B. J.

1977-01-01

Immediate gas changes occurred when untreated Martian surface samples were humidified and/or wet by an aqueous nutrient medium in the Viking lander gas exchange experiment. The evolutions of N2, CO2, and Ar are mainly associated with soil surface desorption caused by water vapor, while O2 evolution is primarily associated with decomposition of superoxides inferred to be present on Mars. On recharges with fresh nutrient and test gas, only CO2 was given off, and its rate of evolution decreased with each recharge. This CO2 evolution is thought to come from the oxidation of organics present in the nutrient by gamma Fe2O3 in the surface samples. Atmospheric analyses were also performed at both sites. The mean atmospheric composition from four analyses is N2, 2.3%; O2, not greater than 0.15%; Ar, 1.5% and CO2, 96.2%.

Tidal Mixing Box Submodel for Tampa Bay: Calibration of Tidal Exchange Flows with the Parameter Estimation Tool (PEST)

EPA Science Inventory

In the mid-1990s the Tampa Bay Estuary Program proposed a nutrient reduction strategy focused on improving water clarity to promote seagrass expansion within Tampa Bay. A System Dynamics Model is being developed to evaluate spatially and temporally explicit impacts of nutrient r...

Numerical modeling of the fetal blood flow in the placental circulatory system

NASA Astrophysics Data System (ADS)

Shannon, Alexander; Gallucci, Sergio; Mirbod, Parisa

2015-11-01

The placenta is a unique organ of exchange between the growing fetus and the mother. It incorporates almost all functions of the adult body, acting as the fetal lung, digestive and immune systems, to mention a few. The exchange of oxygen and nutrients takes place at the surface of the villous tree. Using an idealized geometry of the fetal villous trees in the mouse placenta, in this study we performed 3D computational analysis of the unsteady fetal blood flow, gas, and nutrient transport over the chorionic plate. The fetal blood was treated as an incompressible Newtonian fluid, and the oxygen and nutrient were treated as a passive scalar dissolved in blood plasma. The flow was laminar, and a commercial CFD code (COMSOL Multiphysics) has been used for the simulation. COMSOL has been selected because it is multi-physics FEM software that allows for the seamless coupling of different physics represented by partial differential equations. The results clearly illustrate that the specific branching pattern and the in-plane curvature of the fetal villous trees affect the delivery of blood, gas and nutrient transport to the whole placenta.

Nitrogen and organic carbon cycling processes in tidal marshes and shallow estuarine habitats

NASA Astrophysics Data System (ADS)

Bergamaschi, B. A.; Downing, B. D.; Pellerin, B. A.; Kraus, T. E. C.; Fleck, J.; Fujii, R.

2016-02-01

Tidal wetlands and shallow water habitats can be sites of high aquatic productivity, and they have the potential of exchanging this newly produced organic carbon with adjacent deeper habitats. Indeed, export of organic carbon from wetlands and shallow water habitats to pelagic food webs is one of the primary ecosystem functions targeted in tidal wetland restorations. Alternatively, wetlands and shallow water habitats can function as retention areas for nutrients due to the nutrient demand of emergent macrophytes and denitrification in anoxic zones. They can also remove phytoplankton and non-algal particles from the aquatic food webs because the shallower waters can result in higher rates of benthic grazing and higher settling due to lower water velocities. We conducted studies in wetland and channel sites in the San Francisco estuary (USA) to investigate the dynamics of nutrients and carbon production at a variety of temporal scales. We collected continuous time series of nutrients, oxygen, chlorophyll and pH in conjunction with continuous acoustic measurement of water velocity and discharge to provide mass controls and used simple biogeochemical models to assess rates. We found a high degree of temporal variability in individual systems, corresponding to, for example, changes in nutrient supply, water level, light level, wind, wind direction, and other physical factors. There was also large variability among the different systems, probably due to differences in flows and geomorphic features. We compare the aquatic productivity of theses environments and speculate as to the formative elements of each. Our findings demonstrate the complex interaction between physical, chemical, and biological factors that determine the type of production and degree of export from tidal wetlands and shallow water habitats, suggesting that a clearer picture of these processes is important for guiding future large scale restoration efforts.

Impact of seasonality on the nutrient concentrations in Gautami-Godavari Estuarine Mangrove Complex, Andhra Pradesh, India.

PubMed

Rao, Karuna; Priya, Namrata; Ramanathan, A L

2018-04-01

Spatiotemporal variations of dissolved nutrients were studied along Gautami-Godavari mangrove ecosystem to delineate their sources and fate. Average values of nitrate (NO 3 - ), dissolved silica (DSi) and phosphate (PO 4 3- ) is 2.09 mg/l, 12.7 mg/l and 0.16 mg/l in wet season and 0.47 mg/l, 6.96 mg/l and 0.29 mg/l in dry season respectively. In wet season river discharge has significant influence on NO 3 - and DSi. In dry season, NO 3 - and PO 4 3- are controlled by groundwater discharge, benthic exchange and various in situ processes owing to sediment redox condition. Mixing model shows net addition of phosphate in Coringa mangroves (95%) and Lower estuary (13%) and net removal of nitrate (24.79%) in Coringa mangrove and in estuary (58.9%). Thus present mangrove acts as net source for phosphate and net sink for nitrate and DSi. Nutrient ratio shows seasonal switching between potential Phosphorus and Nitrogen limitation in wet and dry season respectively. Copyright © 2018 Elsevier Ltd. All rights reserved.

Dynamic control of nutrient-removal from industrial wastewater in a sequencing batch reactor, using common and low-cost online sensors.

PubMed

Dries, Jan

2016-01-01

On-line control of the biological treatment process is an innovative tool to cope with variable concentrations of chemical oxygen demand and nutrients in industrial wastewater. In the present study we implemented a simple dynamic control strategy for nutrient-removal in a sequencing batch reactor (SBR) treating variable tank truck cleaning wastewater. The control system was based on derived signals from two low-cost and robust sensors that are very common in activated sludge plants, i.e. oxidation reduction potential (ORP) and dissolved oxygen. The amount of wastewater fed during anoxic filling phases, and the number of filling phases in the SBR cycle, were determined by the appearance of the 'nitrate knee' in the profile of the ORP. The phase length of the subsequent aerobic phases was controlled by the oxygen uptake rate measured online in the reactor. As a result, the sludge loading rate (F/M ratio), the volume exchange rate and the SBR cycle length adapted dynamically to the activity of the activated sludge and the actual characteristics of the wastewater, without affecting the final effluent quality.

Seawater-groundwater exchange and nutrients carried by submarine groundwater discharge in different types of wetlands at Jiaozhou Bay, China

NASA Astrophysics Data System (ADS)

Qu, Wenjing; Li, Hailong; Huang, Hao; Zheng, Chunmiao; Wang, Chaoyue; Wang, Xuejing; Zhang, Yan

2017-12-01

In Jiaozhou Bay, there are four wetland types, including sandy beaches, mud flats, tidal marshes, and estuarine intertidal zones. Four typical transects representing each of the wetland types were selected to investigate the flow dynamics, seawater-groundwater exchange and nutrients carried by submarine groundwater discharge (SGD). Based on field measurements of groundwater heads and salinity along each transect, the SGD averaged over the observation period was estimated using generalized Darcy's law. The SGD along the four transects ranges from 3.6 × 10-3 to 7.6 cm/d with the maximum occurring at the sandy beach. The SGD rate has a good correlation with the hydraulic conductivities of the wetland sediments. There is a positive correlation between the ratio of NO3-N/DIN and SGD rates. The SGD-associated nutrient output rate ranges from 3.3 × 10-2 to 9.5 mmol/m2/d for DIN (dissolved inorganic nitrogen), and from 6.2 × 10-5 to 1.8 × 10-2 mmol/m2/d for DIP (dissolved inorganic phosphorus). Compared to the nutrients delivered by the river, nutrients carried by SGD provide a more important source for the phosphate-limited environment to plankton in Jiaozhou Bay.

Optimizing T Cell Expansion in a Hollow-Fiber Bioreactor.

PubMed

Nankervis, Brian; Jones, Mark; Vang, Boah; Brent Rice, R; Coeshott, Claire; Beltzer, Jim

2018-01-01

Recent developments in regenerative medicine have precipitated the need to expand gene-modified human T cells to numbers that exceed the capacity of well-plate-based, and flask-based processes. This review discusses the changes in process development that are needed to meet the cell expansion requirements by utilizing hollow-fiber bioreactors . Maintenance of cell proliferation over long periods can become limited by unfilled demands for nutrients and oxygen and by the accumulation of waste products in the local environment. Perfusion feeding, improved gas exchange, and the efficient removal of lactate can increase the yield of T cells from an average of 10.8E +09 to more than 28E +09 in only 10 days. Aggressively feeding cells and actively keeping cells in the bioreactor improves gas exchange and metabolite management over semi-static methods. The ability to remove the environmental constraints that can limit cell expansion by using a two-chamber hollow-fiber bioreactor will be discussed.

Assessment of forest nutrient pools in view of biomass potentials - a case study from Austria oak stands

NASA Astrophysics Data System (ADS)

Yan, S.; Bruckman, V. J.; Glatzel, G.; Hochbichler, E.

2012-04-01

As one of the renewable energy forms, bio-energy could help to relieve the pressure which is caused by growing global energy demand. In Austria, large area of forests, traditional utilization of biomass and people's desire to live in a sound environment have supported the positive development of bio-energy. Soil nutrient status is in principle linked with the productivity of the aboveground biomass. This study focuses on K, Ca and Mg pools in soils and aboveground biomass in order to learn more on the temporal dynamics of plant nutrients as indicators for biomass potentials in Quercus dominated forests in northeastern Austria. Three soil types (according to WRB: eutric cambisol, calcic chernozem and haplic luvisol) were considered representative for the area and sampled. We selected nine Quercus petraea dominated permanent plots for this study. Exchangeable cations K, Ca and Mg in the soils were quantified in our study plots. Macronutrients pools of K, Ca and Mg in aboveground biomass were calculated according to inventory data and literature review. The exchangeable cations pool in the top 50 cm of the soil were 882 - 1,652 kg ha-1 for K, 2,661 to 16,510 kg ha-1 for Ca and 320 - 1,850 kg ha-1 for Mg. The nutrient pool in aboveground biomass ranged from 29 to 181 kg ha-1 for K, from 56 to 426 kg ha-1 for Ca and from 4 to 26 kg ha-1 for Mg. The underground exchangeable pools of K, Ca and Mg are generally 10, 22 and 58 times higher than aboveground biomass nutrient pools. Our results showed that the nutrient pools in the mineral soil are sufficient to support the tree growth. The levels of soil nutrients in particular K, Ca and Mg in our study areas are reasonably high and do not indicate the necessity for additional fertilization under current silvicultural practices and biomass extraction rate. The forest in our study areas is in favorable condition to supply biomass as raw material for energy utilization.

Transformations of Heavy Metals and Plant Nutrients in Dredged Sediments as Affected by Oxidation Reduction Potential and pH. Volume 1. Literature Review

DTIC Science & Technology

1977-05-01

895-896 (1974). 191. Fagerstrom, T., and Jernelov, A. "Formation of Methyl Mercury from Pure Mercuric Sulphide in Aerobic Organic Sediment." Water...was available. The toxic and nutrient elements included are lead, cadmium, mercury , arsenic, selenium, copper, zinc, manganese, iron, nitrogen...on the exchange of these materials between sediment and water. The toxic and nutrient elements included are lead, cadmium, mercury , ar- senic

Ambient groundwater flow diminishes nitrogen cycling in streams

NASA Astrophysics Data System (ADS)

Azizian, M.; Grant, S. B.; Rippy, M.; Detwiler, R. L.; Boano, F.; Cook, P. L. M.

2017-12-01

Modeling and experimental studies demonstrate that ambient groundwater reduces hyporheic exchange, but the implications of this observation for stream N-cycling is not yet clear. We utilized a simple process-based model (the Pumping and Streamline Segregation or PASS model) to evaluate N- cycling over two scales of hyporheic exchange (fluvial ripples and riffle-pool sequences), ten ambient groundwater and stream flow scenarios (five gaining and losing conditions and two stream discharges), and three biogeochemical settings (identified based on a principal component analysis of previously published measurements in streams throughout the United States). Model-data comparisons indicate that our model provides realistic estimates for direct denitrification of stream nitrate, but overpredicts nitrification and coupled nitrification-denitrification. Riffle-pool sequences are responsible for most of the N-processing, despite the fact that fluvial ripples generate 3-11 times more hyporheic exchange flux. Across all scenarios, hyporheic exchange flux and the Damkohler Number emerge as primary controls on stream N-cycling; the former regulates trafficking of nutrients and oxygen across the sediment-water interface, while the latter quantifies the relative rates of organic carbon mineralization and advective transport in streambed sediments. Vertical groundwater flux modulates both of these master variables in ways that tend to diminish stream N-cycling. Thus, anthropogenic perturbations of ambient groundwater flows (e.g., by urbanization, agricultural activities, groundwater mining, and/or climate change) may compromise some of the key ecosystem services provided by streams.

A dynamic leaf gas-exchange strategy is conserved in woody plants under changing ambient CO2 : evidence from carbon isotope discrimination in paleo and CO2 enrichment studies

Treesearch

Steven L. Voelker; J. Renee Brooks; Frederick C. Meinzer; Rebecca Anderson; Martin K.-F. Bader; Giovanna Battipaglia; Katie M. Becklin; David Beerling; Didier Bert; Julio L. Betancourt; Todd E. Dawson; Jean-Christophe Domec; Richard P. Guyette; Christian K??rner; Steven W. Leavitt; Sune Linder; John D. Marshall; Manuel Mildner; Jerome Ogee; Irina Panyushkina; Heather J. Plumpton; Kurt S. Pregitzer; Matthias Saurer; Andrew R. Smith; Rolf T. W. Siegwolf; Michael C. Stambaugh; Alan F. Talhelm; Jacques C. Tardif; Peter K. Van de Water; Joy K. Ward; Lisa Wingate

2016-01-01

Rising atmospheric [CO2], ca, is expected to affect stomatal regulation of leaf gas-exchange of woody plants, thus influencing energy fluxes as well as carbon (C), water, and nutrient cycling of forests. Researchers have proposed various strategies for stomatal regulation of leaf gas-exchange that include maintaining a constant leaf internal [CO...

A new generic plant growth model framework (PMF): Simulating distributed dynamic interaction of biomass production and its interaction with water and nutrients fluxes

NASA Astrophysics Data System (ADS)

Multsch, Sebastian; Kraft, Philipp; Frede, Hans-Georg; Breuer, Lutz

2010-05-01

Today, crop models have a widespread application in natural sciences, because plant growth interacts and modifies the environment. Transport processes involve water and nutrient uptake from the saturated and unsaturated zone in the pedosphere. Turnover processes include the conversion of dead root biomass into organic matter. Transpiration and the interception of radiation influence the energy exchange between atmosphere and biosphere. But many more feedback mechanisms might be of interest, including erosion, soil compaction or trace gas exchanges. Most of the existing crop models have a closed structure and do not provide interfaces or code design elements for easy data transfer or process exchange with other models during runtime. Changes in the model structure, the inclusion of alternative process descriptions or the implementation of additional functionalities requires a lot of coding. The same is true if models are being upscaled from field to landscape or catchment scale. We therefore conclude that future integrated model developments would benefit from a model structure that has the following requirements: replaceability, expandability and independency. In addition to these requirements we also propose the interactivity of models, which means that models that are being coupled are highly interacting and depending on each other, i.e. the model should be open for influences from other independent models and react on influences directly. Hence, a model which consists of building blocks seems to be reasonable. The aim of the study is the presentation of the new crop model type, the plant growth model framework, PMF. The software concept refers to an object-oriented approach, which is developed with the Unified Modeling Language (UML). The model is implemented with Python, a high level object-oriented programming language. The integration of the models with a setup code enables the data transfer on the computer memory level and direct exchange of information about changing boundary conditions. The crop model concept refers to two main elements. A plant model, which represents an abstract network of plant organs and processes and a process library, which holds mathematical solutions for the growth processes. Growth processes were mainly taken from existing, well known crop models such as SUCROS and CERES. The crop specific properties of root architecture are described based on a maximum rooting depth and a vertical growth rate. The biomass distribution depends on an interactive allocation process due to the soil layers with a daily time step. In order to show the performance and capabilities of PMF, the model is coupled with the Catchment Modeling Framework (CMF) and the simple nitrogen mineralization model DeComp. The main feature of the integrated model set up is the interaction between root growth, water uptake and nitrogen supply of the soil. We show a virtual case study on the hillslope scale and spatially dependence of water and nitrogen stress based on topographic position and seasonal development.

The Benthic Exchange of O2, N2 and Dissolved Nutrients Using Small Core Incubations.

PubMed

Owens, Michael S; Cornwell, Jeffrey C

2016-08-03

The measurement of sediment-water exchange of gases and solutes in aquatic sediments provides data valuable for understanding the role of sediments in nutrient and gas cycles. After cores with intact sediment-water interfaces are collected, they are submerged in incubation tanks and kept under aerobic conditions at in situ temperatures. To initiate a time course of overlying water chemistry, cores are sealed without bubbles using a top cap with a suspended stirrer. Time courses of 4-7 sample points are used to determine the rate of sediment water exchange. Artificial illumination simulates day-time conditions for shallow photosynthetic sediments, and in conjunction with dark incubations can provide net exchanges on a daily basis. The net measurement of N2 is made possible by sampling a time course of dissolved gas concentrations, with high precision mass spectrometric analysis of N2:Ar ratios providing a means to measure N2 concentrations. We have successfully applied this approach to lakes, reservoirs, estuaries, wetlands and storm water ponds, and with care, this approach provides valuable information on biogeochemical balances in aquatic ecosystems.

Effect of interactions on the nutrient status of a tropical soil treated with green manures and inorganic phosphate fertilizers.

PubMed

Bah, Abdul R; Rahman, Zaharah A; Hussin, Aminuddin

2004-06-08

Integrated nutrient management systems using plant residues and inorganic P fertilizers have high potential for increasing crop production and ensuring sustainability in the tropics, but their adoption requires in-depth understanding of nutrient dynamics in such systems. This was examined in a highly weathered tropical soil treated with green manures (GMs) and P fertilizers in two experiments conducted in the laboratory and glasshouse. The treatments were factorial combinations of the GMs (Calopogonium caeruleum, Gliricidia sepium, and Imperata cylindrica) and P fertilizers (phosphate rocks [PRs] from North Carolina, China, and Algeria, and triple superphosphate) replicated thrice. Olsen P, mineral N, pH, and exchangeable K, Ca, and Mg were monitored in a laboratory incubation study for 16 months. The change in soil P fractions and available P was also determined at the end of the study. Phosphorus available from the amendments was quantified at monthly intervals for 5 months by 33P-32P double isotopic labeling in the glasshouse using Setaria sphacelata as test crop. The GMs were labeled with 33P to determine their contribution to P taken up by Setaria, while that from the P fertilizers was indirectly measured by labeling the soil with 32P. The P fertilizers hardly changed Olsen P and exchangeable cations during 16 months of incubation. The legume GMs and legume GM+P did not change Olsen P, lowered exchangeable Ca, and increased exchangeable K about threefold (4.5 cmol[+]kg(-1) soil) in the first 4 months, even as large amounts of NH4-N accumulated (approximately 1000 mg kg soil(-1)) and soil pH increased to more than 6.5. Afterwards, Olsen P and exchangeable Ca and Mg increased (threefold) as NH4+-N and soil pH declined. The legume GMs also augmented reversibly sorbed P in Al-P and Fe-P fractions resulting in high residual effect in the soil, while fertilizer-P was irreversibly retained. The GMs increased PR-P utilization by 40 to over 80%, mobilized soil P, and markedly enhanced uptake of N, K, Ca, and Mg. Thus GMs+PRs is an appropriate combination for correcting nutrient deficiencies in tropical soils.

Biofilm-induced bioclogging produces sharp interfaces in hyporheic flow, redox conditions, and microbial community structure

NASA Astrophysics Data System (ADS)

Caruso, Alice; Boano, Fulvio; Ridolfi, Luca; Chopp, David L.; Packman, Aaron

2017-05-01

Riverbed sediments host important biogeochemical processes that play a key role in nutrient dynamics. Sedimentary nutrient transformations are mediated by bacteria in the form of attached biofilms. The influence of microbial metabolic activity on the hydrochemical conditions within the hyporheic zone is poorly understood. We present a hydrobiogeochemical model to assess how the growth of heterotrophic and autotrophic biomass affects the transport and transformation of dissolved nitrogen compounds in bed form-induced hyporheic zones. Coupling between hyporheic exchange, nitrogen metabolism, and biomass growth leads to an equilibrium between permeability reduction and microbial metabolism that yields shallow hyporheic flows in a region with low permeability and high rates of microbial metabolism near the stream-sediment interface. The results show that the bioclogging caused by microbial growth can constrain rates and patterns of hyporheic fluxes and microbial transformation rate in many streams.

Atmosphere-Forest Exchange: Important Questions Regarding the Atmosphere's Role in the Delivery of Nutrient Nitrogen and Impacts on Nitrogen and Carbon Cycling

NASA Astrophysics Data System (ADS)

Carroll, M.; Shepson, P. B.; Bertman, S. B.; Sparks, J. P.; Holland, E. A.

2002-12-01

Atmosphere-Forest Exchange: Important Questions Regarding the Atmosphere's Role in the Delivery of Nutrient Nitrogen and Impacts on Nitrogen and Carbon Cycling Atmospheric composition and chemistry directly affect ecosystem nitrogen cycling and indirectly affect ecosystem carbon cycling and storage. Current understanding of atmosphere-forest nitrogen exchange and subsequent impacts is based almost exclusively on nitrogen deposition data obtained from networks using buckets placed in open areas, studies involving inorganic nitrogen, frequently with enhanced N deposition inputs applied only to soils, and that ignore multiple stresses (e.g., the combined effects of aerosols, ozone exposure, elevated CO2, and drought). Current models of nitrogen cycling treat deposited nitrogen (e.g., HNO3 and NO3-) as a permanent sink whereas data appear to indicate that photolytic and heterogeneous chemical processes occurring on surfaces and in dew can result in the re-evolution of gaseous species such as NO and HONO. Similarly, the direct uptake of gaseous nitrogen compounds by foliage has been neglected, compromising conclusions drawn from deposition experiments and ignoring a mechanism that may significantly affect nitrogen cycling and carbon storage, one that may become more significant with future atmospheric and climate change. We hypothesize that the atmosphere plays a significant role in the delivery of nutrient nitrogen to the N-limited mixed hardwood forest at the PROPHET research site at the University of Michigan Biological Station. We assert that a complete understanding of atmosphere- biosphere interactions and feedbacks is required to develop a predictive capability regarding forest response to increasing atmospheric CO2, reactive nitrogen, oxidants, and aerosols, increasing nitrogen and acidic deposition, and anticipated climate change. We further assert that conclusions drawn from studies that are limited to inorganic nitrogen, fertilization of soils, and/or that neglect the role of the canopy (in N uptake and/or remobilization) may not produce a complete understanding of N and C cycling in terrestrial ecosystems, including atmosphere-biosphere interactions and feedbacks. Here, as part of a new PROPHET focus on Biosphere Exchange of Atmospheric Carbon and Odd Nitrogen (BEACON), we identify a number of issues associated with nitrogen limited forest ecosystems and nitrogen saturation and important science questions that require collaborative studies involving the atmospheric and biospheric science communities.

Improving the phytoremediation of heavy metals contaminated soil by use of sewage sludge

PubMed Central

Placek, Agnieszka; Grobelak, Anna; Kacprzak, Malgorzata

2016-01-01

ABSTRACT Sewage sludge, in particular from the food industry, is characterized by fertilizing properties, due to the high content of organic matter and nutrients. The application of sewage sludge causes an improvement of soil parameters as well as increase in cation exchange capacity, and thus stronger binding of cations in the soil environment, which involves the immobilization of nutrients and greater resistance to contamination. In a field experiment sewage sludge has been used as an additive to the soil supporting the phytoremediation process of land contaminated with heavy metals (Cd, Zn, and Pb) using trees species: Scots pine (Pinus silvestris L.), Norway spruce (Picea abies L.), and oak (Quercus robur L.). The aim of the research was to determine how the application of sewage sludge into the soil surface improves the phytoremediation process. The conducted field experiment demonstrated that selected trees like Scots pine and Norway spruce, because of its excellent adaptability, can be used in the remediation of soil. Oak should not be used in the phytoremediation process of soils contaminated with high concentrations of trace elements in the soil, because a significant amount of heavy metals was accumulated in the leaves of oak causing a risk of recontamination. PMID:26368503

Improving the phytoremediation of heavy metals contaminated soil by use of sewage sludge.

PubMed

Placek, Agnieszka; Grobelak, Anna; Kacprzak, Malgorzata

2016-01-01

Sewage sludge, in particular from the food industry, is characterized by fertilizing properties, due to the high content of organic matter and nutrients. The application of sewage sludge causes an improvement of soil parameters as well as increase in cation exchange capacity, and thus stronger binding of cations in the soil environment, which involves the immobilization of nutrients and greater resistance to contamination. In a field experiment sewage sludge has been used as an additive to the soil supporting the phytoremediation process of land contaminated with heavy metals (Cd, Zn, and Pb) using trees species: Scots pine (Pinus silvestris L.), Norway spruce (Picea abies L.), and oak (Quercus robur L.). The aim of the research was to determine how the application of sewage sludge into the soil surface improves the phytoremediation process. The conducted field experiment demonstrated that selected trees like Scots pine and Norway spruce, because of its excellent adaptability, can be used in the remediation of soil. Oak should not be used in the phytoremediation process of soils contaminated with high concentrations of trace elements in the soil, because a significant amount of heavy metals was accumulated in the leaves of oak causing a risk of recontamination.

Nutrient inputs through submarine groundwater discharge in an embayment: A radon investigation in Daya Bay, China

NASA Astrophysics Data System (ADS)

Wang, Xuejing; Li, Hailong; Yang, Jinzhong; Zheng, Chunmiao; Zhang, Yan; An, An; Zhang, Meng; Xiao, Kai

2017-08-01

Daya Bay, a semi-closed bay of the South China Sea, is famous for its aquaculture, agriculture and tourism. Although routine environmental investigations in the bay have been conducted since the early 1980s, evaluations of submarine groundwater discharge (SGD), an important process in exchange between groundwater and coastal seawater, and its environmental impacts have never been reported. In this study, naturally occurring radon isotope (222Rn) was measured continuously at two sites (north-west and middle-east sites) and used as a tracer to estimate SGD and associated nutrient inputs into the bay. The SGD rates estimated based on the 222Rn mass balance model were, on average, 28.2 cm/d at north-west site and 30.9 cm/d at middle-east site. The large SGD rate at middle-east site may be due to the large tidal amplitude and the sandy component with high permeability in sediments. The SGD-driven nutrient fluxes, which were calculated as the product of SGD flux and the difference of nutrient concentrations between coastal groundwater and seawater, were 3.28 × 105 mol/d for dissolved nitrates (NO3-N), 5.84 × 103 mol/d for dissolved inorganic phosphorous (DIP), and 8.97 × 105 mol/d for reactive silicate (Si). These nutrient inputs are comparable to or even higher than those supplied by local rivers. In addition, these SGD-driven nutrients have a nitrogen-phosphorous ratio as high as ∼43, which may significantly affect the ecology of coastal waters and lead to frequent occurrence of harmful algal blooms.

Nutrient and pollutant metals within earthworm residues are immobilized in soil during decomposition

PubMed Central

Richardson, J.B; Renock, D.J; Görres, J.H; Jackson, B.P; Webb, S.M; Friedland, A.J

2016-01-01

Earthworms are known to bioaccumulate metals, making them a potential vector for metal transport in soils. However, the fate of metals within soil upon death of earthworms has not been characterized. We compared the fate of nutrient (Ca, Mg, Mn) and potentially toxic (Cu, Zn, Pb) metals during decomposition of Amynthas agrestis and Lumbricus rubellus in soil columns. Cumulative leachate pools, exchangeable pools (0.1 M KCl + 0.01 M acetic acid extracted), and stable pools (16 M HNO3 + 12 M HCl extracted) were quantified in the soil columns after 7, 21, and 60 days of decomposition. Soil columns containing A. agrestis and L. rubellus had significantly higher cumulative leachate pools of Ca, Mn, Cu, and Pb than Control soil columns. Exchangeable and stable pools of Cu, Pb, and Zn were greater for A. agrestis and L. rubellus soil columns than Control soil columns. However, we estimated that > 98 % of metals from earthworm residues were immobilized in the soil in an exchangeable or stable form over the 60 days using a mass balance approach. Micro-XRF images of longitudinal thin sections of soil columns after 60 days containing A. agrestis confirm metals immobilization in earthworm residues. Our research demonstrates that nutrient and toxic metals are stabilized in soil within earthworm residues. PMID:28163331

Examining Dehydration and Hypoxic Stress in Wheat Plants Using a Porous Tube Plant Nutrient Delivery System Developed for Microgravity

NASA Technical Reports Server (NTRS)

Dreschel, T. W.; Hall, C. R.; Foster, T. E.; Salganic, M.; Warren, L.; Corbett, M.

2005-01-01

The Porous Tube Plant Nutrient Delivery System (PTPNDS) was designed for NASA to grow plants in microgravity of space. The system utilizes a controlled fluid loop to supply nutrients and water to plant roots growing on a ceramic surface moistened by capiflary action. A PTPNDS test bed was developed and utilizing remote sensing systems, spectral analyses procedures, gas-exchange, and fluorescence measurements, we examined differences in plant water status for wheat plants (Triticum aestivum, cv. Perigee) grown in a modified growth chamber during the summers of 2003 and 2004. Some differences in plant performance were detectable in the gas-exchange and fluorescence measurements. For instance, in both years the plants grown with the most available water had the lowest rates of photosynthesis and exhibited higher proportions of non-photochemical quenching particularly under low light levels. In addition, small differences in mean leaf water content between treatments were detected using spectral reflectance analyses.

A 3D parameterization of iron atmospheric deposition to the global ocean

NASA Astrophysics Data System (ADS)

Myriokefalitakis, Stelios; Krol, Maarten C.; van Noije, Twan P. C.; Le Sager, Philippe

2017-04-01

Atmospheric deposition of trace constituents, both of natural and anthropogenic origin, can act as a nutrient source into the open ocean and affect marine ecosystem functioning and subsequently the exchange of CO2 between the atmosphere and the global ocean. Dust is known as a major source of nutrients to the global ocean, but only a fraction of these nutrients is released in soluble form that can be assimilated by the ecosystems. Iron (Fe) is a key micronutrient that significantly modulates gross primary production in High-Nutrient-Low-Chlorophyll (HNLC) oceans, where macronutrients like nitrate are abundant but primary production is limited by Fe scarcity. The global atmospheric Fe cycle is here parameterized in the state-of-the-art global Earth System Model EC-Earth. The model takes into account the primary emissions of both insoluble and soluble Fe, associated with dusts and combustion processes. The impact of atmospheric acidity on mineral solubility is parameterized based on updated experimental and theoretical findings, and model results are evaluated against available observations. The link between the soluble Fe atmospheric deposition and anthropogenic sources is also investigated. Overall, the response of the chemical composition of nutrient containing aerosols to atmospheric composition changes is demonstrated and quantified. This work has been financed by the Marie-Curie H2020-MSCA-IF-2015 grant (ID 705652) ODEON (Online DEposition over OceaNs: Modeling the effect of air pollution on ocean bio-geochemistry in an Earth System Model).

Water mass interaction in the confluence zone of the Daning River and the Yangtze River--a driving force for algal growth in the Three Gorges Reservoir.

PubMed

Holbach, Andreas; Wang, Lijing; Chen, Hao; Hu, Wei; Schleicher, Nina; Zheng, Binghui; Norra, Stefan

2013-10-01

Increasing eutrophication and algal bloom events in the Yangtze River Three Gorges Reservoir, China, are widely discussed with regard to changed hydrodynamics and nutrient transport and distribution processes. Insights into water exchange and interaction processes between water masses related to large-scale water level fluctuations in the reservoir are crucial to understand water quality and eutrophication dynamics. Therefore, confluence zones of tributaries with the Yangtze River main stream are dedicated key interfaces. In this study, water quality data were recorded in situ and on-line in varying depths with the MINIBAT towed underwater multi-sensor system in the confluence zone of the Daning River and the Yangtze River close to Wushan City during 1 week in August 2011. Geostatistical evaluation of the water quality data was performed, and results were compared to phosphorus contents of selective water samples. The strongly rising water level throughout the measurement period caused Yangtze River water masses to flow upstream into the tributary and supply their higher nutrient and particulate loads into the tributary water body. Rapid algal growth and sedimentation occurred immediately when hydrodynamic conditions in the confluence zone became more serene again. Consequently, water from the Yangtze River main stream can play a key role in providing nutrients to the algal bloom stricken water bodies of its tributaries.

Nutrient Effects on Belowground Organic Matter in a ...

EPA Pesticide Factsheets

Belowground structure and carbon dioxide emission rates were examined in minerogenic marshes of the North Inlet estuary, a system dominated by depositional processes and typical of the southeastern USA. Three areas were sampled: a long-term nutrient enrichment experiment (Goat Island); a fringing marsh that only receives drainage from an entirely forested watershed (upper Crab Haul Creek); and three locations along a creek basin that receives drainage from a residential and golf course development situated at its headwaters (Debidue Creek). Responses to fertilization at Goat Island were an increase in soil organic matter, an increase in number of rhizomes, enlarged rhizome diameters, decreased fine root mass, and increased carbon dioxide emission rates. At the Crab Haul Creek, the greatest abundances of coarse roots and rhizomes were observed in the high marsh compared to the low marsh and creekbank. The upper and mid Debidue Creek, which may be influenced by nutrient inputs associated with land development, had significantly fewer rhizomes compared to the mouth, which was dominated by exchange with bay waters. Carbon dioxide emission rates at the fertilized Goat Island plots were similar in magnitude to the upper Debidue Creek and significantly greater than the Goat Island control plots and the Crab Haul Creek. Inputs of sediment and particulates in marshes dominated by depositional processes such as the North Inlet may buffer the system from adverse effects of

Effects of flooding on ion exchange rates in an Upper Mississippi River floodplain forest impacted by herbivory, invasion, and restoration

USGS Publications Warehouse

Kreiling, Rebecca; DeJager, Nathan R.; Whitney Swanson,; Eric A. Strauss,; Meredith Thomsen,

2015-01-01

We examined effects of flooding on supply rates of 14 nutrients in floodplain areas invaded by Phalaris arundinacea (reed canarygrass), areas restored to young successional forests (browsed by white-tailed deer and unbrowsed), and remnant mature forests in the Upper Mississippi River floodplain. Plant Root Simulator ion-exchange probes were deployed for four separate 28-day periods. The first deployment occurred during flooded conditions, while the three subsequent deployments were conducted during progressively drier periods. Time after flooding corresponded with increases in NO3 −-N, K+ and Zn+2, decreases in H2PO4 −-P, Fe+3, Mn+2, and B(OH)4-B, a decrease followed by an increase in NH4 +-N, Ca+2, Mg+2 and Al+3, and an increase followed by a decrease for SO4 −2-S. Plant community type had weak to no effects on nutrient supply rates compared to the stronger effects of flooding duration. Our results suggest that seasonal dynamics in floodplain nutrient availability are similarly driven by flood pulses in different community types. However, reed canarygrass invasion has potential to increase availability of some nutrients, while restoration of forest cover may promote recovery of nutrient availability to that observed in reference mature forests.

Chemical restrictions of roots in Ultisol subsoils lessened by long-term management

NASA Technical Reports Server (NTRS)

Hardy, D. H.; Raper, C. D. Jr; Miner, G. S.; Raper CD, J. r. (Principal Investigator)

1990-01-01

Exchangeable Al in subsoils of Ultisols in the southeastern USA can restrict rooting depth. Downward movement of basic cations (Ca, Mg, and K), applied as lime and fertilizer, may diminish that restriction over time. Materials from the argillic horizon were collected from three paired sites, having managed (long-term cropping) and nonmanaged topsoils (Typic Paleudults and Hapludults). One managed site was cropped continuously for 15 yr while the others were cultivated for more than 30 yr. Concentrations of extractable cations and other nutrients from the paired sites were compared to determine the magnitude of change due to management. The ability of the subsoils to support plant growth was evaluated in a missing-nutrient greenhouse experiment with sorghum [Sorghum bicolor (L.) Moench]. Subsoils of managed sites had greater effective cation-exchange capacity (CEC) and base saturation than those of non-managed sites. While availabilities of Ca, Mg, and K in subsoils of nonmanaged sites were inadequate to support maximal plant growth, they were adequate in subsoils of managed sites. Compared with nonmanaged sites, KCl-exchangeable Al in subsoils of managed sites was 23% lower at the 15-yr location and 65 and 100% lower at the two other locations. In the absence of lime, sorghum growth was almost totally inhibited on nonmanaged subsoils amended with optimum nutrients. On the managed subsoils, where 100, 65, and 23% of the nonmanaged exchangeable Al had been neutralized by topsoil fertilization and liming, growth reductions under the same conditions were 0, 50, and 100%, respectively. Thus, relatively long-term management had improved these Ultisol subsoils for root growth and development.

Ecophysiology of a Mangrove Forest in Jobos Bay, Puerto Rico

Treesearch

ARIEL E. LUGO; ERNESTO MEDINA; ELVIRA CUEVAs; CINTR& #211; GILBERTO N; EDDIE N. LABOY NIEVES; SCH& #196; YARA EFFER NOVELLI

2007-01-01

We studied gas exchange, leaf dimensions, litter production, leaf and litterfall chemistry, nutrient flux to the forest floor, retranslocation rates, and nutrient use efficiency of mangroves in Jobos Bay, Puerto Rico. The fringe forest had a salinity gradient from the ocean (35‰) to a salt flat (100‰) and a basin (about 80‰). Red (Rhizophora mangle), white (...

Effect of land use on the spatial variability of organic matter and nutrient status in an Oxisol

NASA Astrophysics Data System (ADS)

Paz-Ferreiro, Jorge; Alves, Marlene Cristina; Vidal Vázquez, Eva

2013-04-01

Heterogeneity is now considered as an inherent soil property. Spatial variability of soil attributes in natural landscapes results mainly from soil formation factors. In cultivated soils much heterogeneity can additionally occur as a result of land use, agricultural systems and management practices. Organic matter content (OMC) and nutrients associated to soil exchange complex are key attribute in the maintenance of a high quality soil. Neglecting spatial heterogeneity in soil OMC and nutrient status at the field scale might result in reduced yield and in environmental damage. We analyzed the impact of land use on the pattern of spatial variability of OMC and soil macronutrients at the stand scale. The study was conducted in São Paulo state, Brazil. Land uses were pasture, mango orchard and corn field. Soil samples were taken at 0-10 cm and 10-20 cm depth in 84 points, within 100 m x 100 m plots. Texture, pH, OMC, cation exchange capacity (CEC), exchangeable cations (Ca, Mg, K, H, Al) and resin extractable phosphorus were analyzed.. Statistical variability was found to be higher in parameters defining the soil nutrient status (resin extractable P, K, Ca and Mg) than in general soil properties (OMC, CEC, base saturation and pH). Geostatistical analysis showed contrasting patterns of spatial dependence for the different soil uses, sampling depths and studied properties. Most of the studied data sets collected at two different depths exhibited spatial dependence at the sampled scale and their semivariograms were modeled by a nugget effect plus a structure. The pattern of soil spatial variability was found to be different between the three study soil uses and at the two sampling depths, as far as model type, nugget effect or ranges of spatial dependence were concerned. Both statistical and geostatistical results pointed out the importance of OMC as a driver responsible for the spatial variability of soil nutrient status.

Gas Exchange of Algae

PubMed Central

Ammann, Elizabeth C. B.; Lynch, Victoria H.

1967-01-01

The oxygen production of a photosynthetic gas exchanger containing Chlorella pyrenoidosa (1% packed cell volume) was measured when various concentrations of carbon dioxide were present within the culture unit. The internal carbon dioxide concentrations were obtained by manipulating the entrance gas concentration and the flow rate. Carbon dioxide percentages were monitored by means of electrodes placed directly in the nutrient medium. The concentration of carbon dioxide in the nutrient medium which produced maximal photosynthesis was in the range of 1.5 to 2.5% by volume. Results were unaffected by either the level of carbon dioxide in the entrance gas or the rate of gas flow. Entrance gases containing 2% carbon dioxide flowing at 320 ml/min, 3% carbon dioxide at 135 ml/min, and 4% carbon dioxide at 55 ml/min yielded optimal carbon dioxide concentrations in the particular unit studied. By using carbon dioxide electrodes implanted directly in the gas exchanger to optimize the carbon dioxide concentration throughout the culture medium, it should be possible to design more efficient large-scale units. PMID:4382391

Effects of vegetation structure on soil carbon, nutrients and greenhouse gas exchange in a savannah ecosystem of Mount Kilimanjaro Region

NASA Astrophysics Data System (ADS)

Becker, J.

2015-12-01

The savannah biome is a hotspot for biodiversity and wildlife conservation in Africa and recently got in the focus of research on carbon sequestration. Savannah ecosystems are under strong pressure from climate and land-use change, especially around populous areas like the Mt. Kilimanjaro region. Savannah vegetation consists of grassland with isolated trees and is therefore characterized by high spatial variation of canopy cover, aboveground biomass and root structure. The canopy structure is a major regulator for soil ecological parameters and soil-atmospheric trace gas exchange (CO2, N2O, CH4) in water limited environments. The spatial distribution of these parameters and the connection between above and belowground processes are important to understand and predict ecosystem changes and estimate its vulnerability. Our objective was to determine spatial trends and changes of soil parameters and relate their variability to the vegetation structure. We chose three trees from each of the two most dominant species (Acacia nilotica and Balanites aegyptiaca) in our research area. For each tree, we selected transects with nine sampling points of the same relative distances to the stem. At these each sampling point a soil core was taken and separated in 0-10 cm and 10-30 cm depth. We measured soil carbon (C) and nitrogen (N) storage, microbial biomass C and N, Natural δ13C, soil respiration, available nutrients, pH, cation exchange capacity (CEC) as well as root biomass and -density, soil temperature and soil water content. Concentrations and stocks of C and N fractions, CEC and K+ decreased up to 50% outside the crown covered area. Microbial C:N ratio and CO2 efflux was about 30% higher outside the crown. This indicates N limitation and low C use efficiency in soil outside the crown area. We conclude that the spatial structure of aboveground biomass in savanna ecosystems leads to a spatial variance in nutrient limitation. Therefore, the capability of a savanna ecosystem to act as a C sink is directly and indirectly dependent on the vegetation structure.

Recent directions taken in water, energy, and biogeochemical budgets research

USGS Publications Warehouse

Lins, Harry F.

1994-01-01

Understanding and predicting global change is a major scientific focus of the late 20th century. Although atmospheric scientists have made substantial progress in developing models that account for many components of the climate system, significant progress is needed in understanding processes associated with the exchange of water, energy, and carbon between terrestrial systems and the atmosphere.To strengthen terrestrial process research, especially research associated with the interactions of water, energy, gases, nutrients, and vegetation, the U.S. Geological Survey initiated an intensive study of Water, Energy, and Biogeochemical Budgets (WEBB). WEBB is aimed at improving understanding of processes controlling terrestrial water, energy, and biogeochemical fluxes, their interactions, and their relations to climatic variables; and the ability to predict continental water, energy, and biogeochemical budgets over a range of spatial and temporal scales.

Biofunctionalized Ceramic with Self-Assembled Networks of Nanochannels

PubMed Central

Jang, Hae Lin; Lee, Keunho; Kang, Chan Soon; Lee, Hye Kyoung; Ahn, Hyo-Yong; Jeong, Hui-Yun; Park, Sunghak; Kim, Seul Cham; Jin, Kyoungsuk; Park, Jimin; Yang, Tae-Youl; Kim, Jin Hong; Shin, Seon Ae; Han, Heung Nam; Oh, Kyu Hwan; Lee, Ho-Young; Lim, Jun; Hong, Kug Sun; Snead, Malcolm L.; Xu, Jimmy; Nam, Ki Tae

2015-01-01

Nature designs circulatory systems with hierarchically organized networks of gradually tapered channels ranging from micrometer to nanometer in diameter. In most hard tissues in biological systems, fluid, gasses, nutrients and wastes are constantly exchanged through such networks. Here, we developed a biologically-inspired, hierarchically-organized structure in ceramic to achieve effective permeation with minimum void region, using fabrication methods that create a long-range, highly-interconnected nanochannel system in a ceramic biomaterial. This design of a synthetic model-material was implemented through a novel pressurized sintering process formulated to induce a gradual tapering in channel diameter based on pressure-dependent polymer agglomeration. The resulting system allows long range, efficient transport of fluid and nutrients into sites and interfaces that conventional fluid conduction cannot reach without external force. We demonstrate the ability of mammalian bone-forming cells placed at the distal transport termination of the nanochannel system to proliferate in a manner dependent solely upon the supply of media by the self-powering nanochannels. This approach mimics the significant contribution that nanochannel transport plays in maintaining living hard tissues by providing nutrient supply that facilitates cell growth and differentiation, and thereby makes the ceramic composite ‘alive’. PMID:25827409

Evaluating Spatial Variability in Sediment and Phosphorus Concentration-Discharge Relationships Using Bayesian Inference and Self-Organizing Maps

NASA Astrophysics Data System (ADS)

Underwood, Kristen L.; Rizzo, Donna M.; Schroth, Andrew W.; Dewoolkar, Mandar M.

2017-12-01

Given the variable biogeochemical, physical, and hydrological processes driving fluvial sediment and nutrient export, the water science and management communities need data-driven methods to identify regions prone to production and transport under variable hydrometeorological conditions. We use Bayesian analysis to segment concentration-discharge linear regression models for total suspended solids (TSS) and particulate and dissolved phosphorus (PP, DP) using 22 years of monitoring data from 18 Lake Champlain watersheds. Bayesian inference was leveraged to estimate segmented regression model parameters and identify threshold position. The identified threshold positions demonstrated a considerable range below and above the median discharge—which has been used previously as the default breakpoint in segmented regression models to discern differences between pre and post-threshold export regimes. We then applied a Self-Organizing Map (SOM), which partitioned the watersheds into clusters of TSS, PP, and DP export regimes using watershed characteristics, as well as Bayesian regression intercepts and slopes. A SOM defined two clusters of high-flux basins, one where PP flux was predominantly episodic and hydrologically driven; and another in which the sediment and nutrient sourcing and mobilization were more bimodal, resulting from both hydrologic processes at post-threshold discharges and reactive processes (e.g., nutrient cycling or lateral/vertical exchanges of fine sediment) at prethreshold discharges. A separate DP SOM defined two high-flux clusters exhibiting a bimodal concentration-discharge response, but driven by differing land use. Our novel framework shows promise as a tool with broad management application that provides insights into landscape drivers of riverine solute and sediment export.

Distribution of green algal mats throughout shallow soft bottoms of the Swedish Skagerrak archipelago in relation to nutrient sources and wave exposure

NASA Astrophysics Data System (ADS)

Pihl, Leif; Svenson, Anders; Moksnes, Per-Olav; Wennhage, Håkan

1999-06-01

Distribution and biomass of green algal mats were studied in marine shallow (0-1 m) soft-bottom areas on the Swedish west coast from 1994 to 1996, by combining aerial photography surveys with ground truth sampling. Filamentous green algae, dominated by species of the genera Cladophora and Enteromorpha, were generally present throughout the study area during July and August, and largely absent in late April and early May. These algae occurred at 60 to 90% of the locations investigated during the summer, and were estimated to cover between 30 and 50% of the total area of shallow soft bottoms of the Swedish Skagerrak archipelago. The distributional patterns were similar during the three years of the investigation and appeared unrelated to annual local nutrient inputs from point sources and river discharge. We postulate that the apparent lack of such a relationship is due to an altered state of nutrient dynamics throughout the archipelago. Mechanisms are likely to involve long-term, diffuse elevations in nutrient levels in coastal waters of the Skagerrak and the Kattegat over several decades leading to current eutrophic conditions, exceeding nutrient requirements for abundant filamentous algal growth. Patterns of algal abundance in our study were largely related to physical factors such as exposure to wind, waves and water exchange under conditions where nutrient loads among embayments seemed to be unlimited. Further, our results show that sediments covered by algal mats had higher carbon and nitrogen contents than unvegetated sediments. We hypothesise that sustained high nutrient loads, manifested in extensive biomass of filamentous algae during summer months, are re-mineralised via decay and sedimentation in the benthic realm. Hence, accumulated carbon and nutrients in the sediment could, in turn, constitute the basic pool for future algal mat production overlying soft bottoms in areas where tidal exchange is limited.

Ecosystem attributes related to tidal wetland effects on water quality.

PubMed

Findlay, S; Fischer, D

2013-01-01

Biogeochemical functioning of ecosystems is central to nutrient cycling, carbon balance, and several ecosystem services, yet it is not always clear why levels of function might vary among systems. Wetlands are widely recognized for their ability to alter concentrations of solutes and particles as water moves through them, but we have only general expectations for what attributes of wetlands are linked to variability in these processes. We examined changes in several water quality variables (dissolved oxygen, dissolved organic carbon, nutrients, and suspended particles) to ascertain which constituents are influenced during tidal exchange with a range of 17 tidal freshwater wetlands along the Hudson River, New York, USA. Many of the constituents showed significant differences among wetlands or between flooding and ebbing tidal concentrations, indicating wetland-mediated effects. For dissolved oxygen, the presence of even small proportional cover by submerged aquatic vegetation increased the concentration of dissolved oxygen in water returned to the main channel following a daytime tidal exchange. Nitrate concentrations showed consistent declines during ebbing tides, but the magnitude of decline varied greatly among sites. The proportional cover by graminoid-dominated high intertidal vegetation accounted for over 40% of the variation in nitrate decline. Knowing which water-quality alterations are associated with which attributes helps suggest underlying mechanisms and identifies what functions might be susceptible to change as sea level rise or salinity intrusion drives shifts in wetland vegetation cover.

Soil carbon and nutrient pools in Douglas-fir plantations 5 years after manipulating biomass and competing vegetation in the Pacific Nortwest

Treesearch

Robert A. Slesak; Stephen H. Schoenholtz; Timothy B. Harrington

2011-01-01

We assessed changes in mineral soil total carbon (C) and nutrient (exchangeable Ca, K, Mg, and total N) pools to 60 cm depth 5 years after manipulating biomass and competing vegetation at two contrasting Douglas-fir plantations (Matlock, WA, and Molalla, OR). Biomass treatments included whole-tree (WT) and bole-only (BO) harvest, and competing vegetation control (VC)...

Effects of climate, land management, and sulfur deposition on soil base cation supply in national forests of the southern Appalachian mountains

Treesearch

T.C. McDonnell; T.J. Sullivan; B.J. Cosby; W.A. Jackson; K.J. Elliott

2013-01-01

Forest soils having low exchangeable calcium (Ca) and other nutrient base cation (BC) reserves may induce nutrient deficiencies in acid-sensitive plants and impact commercially important tree species. Past and future depletion of soil BC in response to acidic sulfur (S) deposition, forest management, and climate change alter the health and productivity of forest trees...

[Sediment-water flux and processes of nutrients and gaseous nitrogen release in a China River Reservoir].

PubMed

Chen, Zhu-hong; Chen, Neng-wang; Wu, Yin-qi; Mo, Qiong-li; Zhou, Xing-peng; Lu, Ting; Tian, Yun

2014-09-01

The key processes and fluxes of nutrients (N and P) and gaseous N (N2 and N2O) across the sediment-water interface in a river reservoir (Xipi) of the Jiulong River watershed in southeast China were studied. Intact core sediment incubation of nutrients exchange, in-situ observation and lab incubation of excess dissolved N2 and N2O (products of nitrification, denitrification and Anammox), and determination of physiochemical and microbe parameters were carried out in 2013 for three representative sites along the lacustrine zone of the reservoir. Results showed that ammonium and phosphate were generally released from sediment to overlying water [with averaged fluxes of N (479.8 ± 675.4) mg. (m2. d)-1 and P (4. 56 ± 0.54) mg. (m2 d) -1] , while nitrate and nitrite diffused into the sediment. Flood events in the wet season could introduce a large amount of particulate organic matter that would be trapped by the dam reservoir, resulting in the high release fluxes of ammonium and phosphate observed in the following low-flow season. No clear spatial variation of sediment nutrient release was found in the lacustrine zone of the reservoir. Gaseous N release was dominated by excess dissolved N2 (98% of total), and the N2 flux from sediment was (15.8 ± 12. 5) mg (m2. d) -1. There was a longitudinal and vertical variation of excess dissolved N2, reflecting the combined results of denitrification and Anammox occurring in anoxic sediment and fluvial transport. Nitrification mainly occurred in the lower lacustrine zone, and the enrichment of N2O was likely regulated by the ratio of ammonium to DIN in water.

Biomass, gas exchange, and nutrient contents in upland rice plants affected by application forms of microorganism growth promoters.

PubMed

Nascente, Adriano Stephan; de Filippi, Marta Cristina Corsi; Lanna, Anna Cristina; de Souza, Alan Carlos Alves; da Silva Lobo, Valácia Lemes; da Silva, Gisele Barata

2017-01-01

Microorganisms are considered a genetic resource with great potential for achieving sustainable development of agricultural areas. The objective of this research was to determine the effect of microorganism application forms on the production of biomass, gas exchange, and nutrient content in upland rice. The experiment was conducted under greenhouse conditions in a completely randomized design in a factorial 7 × 3 + 1, with four replications. The treatments consisted of combining seven microorganisms with three application forms (microbiolized seed; microbiolized seed + soil drenched with a microorganism suspension at 7 and 15 days after sowing (DAS); and microbiolized seed + plant sprayed with a microorganism suspension at 7 and 15 DAS) and a control (water). Treatments with Serratia sp. (BRM32114), Bacillus sp. (BRM32110 and BRM32109), and Trichoderma asperellum pool provided, on average, the highest photosynthetic rate values and dry matter biomass of rice shoots. Plants treated with Burkolderia sp. (BRM32113), Serratia sp. (BRM32114), and Pseudomonas sp. (BRM32111 and BRM32112) led to the greatest nutrient uptake by rice shoots. Serratia sp. (BRM 32114) was the most effective for promoting an increase in the photosynthetic rate, and for the greatest accumulation of nutrients and dry matter at 84 DAS, in rice shoots, which differed from the control treatment. The use of microorganisms can bring numerous benefits of rice, such as improving physiological characteristics, nutrient uptake, biomass production, and grain yield.

Bioactive Molecules in Soil Ecosystems: Masters of the Underground

PubMed Central

Zhuang, Xuliang; Gao, Jie; Ma, Anzhou; Fu, Shenglei; Zhuang, Guoqiang

2013-01-01

Complex biological and ecological processes occur in the rhizosphere through ecosystem-level interactions between roots, microorganisms and soil fauna. Over the past decade, studies of the rhizosphere have revealed that when roots, microorganisms and soil fauna physically contact one another, bioactive molecular exchanges often mediate these interactions as intercellular signal, which prepare the partners for successful interactions. Despite the importance of bioactive molecules in sustainable agriculture, little is known of their numerous functions, and improving plant health and productivity by altering ecological processes remains difficult. In this review, we describe the major bioactive molecules present in below-ground ecosystems (i.e., flavonoids, exopolysaccharides, antibiotics and quorum-sensing signals), and we discuss how these molecules affect microbial communities, nutrient availability and plant defense responses. PMID:23615474

Evidence of chronic anthropogenic nutrient within coastal lagoon reefs adjacent to urban and tourism centers, Kenya: A stable isotope approach.

PubMed

Mwaura, Jelvas; Umezawa, Yu; Nakamura, Takashi; Kamau, Joseph

2017-06-30

The source of anthropogenic nutrient and its spatial extent in three fringing reefs with differing human population gradients in Kenya were investigated using stable isotope approaches. Nutrient concentrations and nitrate-δ 15 N in seepage water indicated that population density and tourism contributed greatly to the extent of nutrient loading to adjacent reefs. Although water-column nutrient analyses did not show any significant difference among the reefs, higher δ 15 N and N contents in macrophytes showed terrestrial nutrients affected primary producers in onshore areas in Nyali and Bamburi reefs, but were mitigated by offshore water intrusion especially at Nyali. On the offshore reef flat, where the same species of macroalgae were not available, complementary use of δ 15 N in sedimentary organic matter suggested inputs of nutrients originated from the urban city of Mombasa. If population increases in the future, nutrient conditions in the shallower reef, Vipingo, may be dramatically degraded due to lower water exchange ratio. Copyright © 2017 Elsevier Ltd. All rights reserved.

Coupled eco-hydrology and biogeochemistry algorithms enable the simulation of water table depth effects on boreal peatland net CO2 exchange

NASA Astrophysics Data System (ADS)

Mezbahuddin, Mohammad; Grant, Robert F.; Flanagan, Lawrence B.

2017-12-01

Water table depth (WTD) effects on net ecosystem CO2 exchange of boreal peatlands are largely mediated by hydrological effects on peat biogeochemistry and the ecophysiology of peatland vegetation. The lack of representation of these effects in carbon models currently limits our predictive capacity for changes in boreal peatland carbon deposits under potential future drier and warmer climates. We examined whether a process-level coupling of a prognostic WTD with (1) oxygen transport, which controls energy yields from microbial and root oxidation-reduction reactions, and (2) vascular and nonvascular plant water relations could explain mechanisms that control variations in net CO2 exchange of a boreal fen under contrasting WTD conditions, i.e., shallow vs. deep WTD. Such coupling of eco-hydrology and biogeochemistry algorithms in a process-based ecosystem model, ecosys, was tested against net ecosystem CO2 exchange measurements in a western Canadian boreal fen peatland over a period of drier-weather-driven gradual WTD drawdown. A May-October WTD drawdown of ˜ 0.25 m from 2004 to 2009 hastened oxygen transport to microbial and root surfaces, enabling greater microbial and root energy yields and peat and litter decomposition, which raised modeled ecosystem respiration (Re) by 0.26 µmol CO2 m-2 s-1 per 0.1 m of WTD drawdown. It also augmented nutrient mineralization, and hence root nutrient availability and uptake, which resulted in improved leaf nutrient (nitrogen) status that facilitated carboxylation and raised modeled vascular gross primary productivity (GPP) and plant growth. The increase in modeled vascular GPP exceeded declines in modeled nonvascular (moss) GPP due to greater shading from increased vascular plant growth and moss drying from near-surface peat desiccation, thereby causing a net increase in modeled growing season GPP by 0.39 µmol CO2 m-2 s-1 per 0.1 m of WTD drawdown. Similar increases in GPP and Re caused no significant WTD effects on modeled seasonal and interannual variations in net ecosystem productivity (NEP). These modeled trends were corroborated well by eddy covariance measured hourly net CO2 fluxes (modeled vs. measured: R2 ˜ 0.8, slopes ˜ 1 ± 0.1, intercepts ˜ 0.05 µmol m-2 s-1), hourly measured automated chamber net CO2 fluxes (modeled vs. measured: R2 ˜ 0.7, slopes ˜ 1 ± 0.1, intercepts ˜ 0.4 µmol m-2 s-1), and other biometric and laboratory measurements. Modeled drainage as an analog for WTD drawdown induced by climate-change-driven drying showed that this boreal peatland would switch from a large carbon sink (NEP ˜ 160 g C m-2 yr-1) to carbon neutrality (NEP ˜ 10 g C m-2 yr-1) should the water table deepen by a further ˜ 0.5 m. This decline in projected NEP indicated that a further WTD drawdown at this fen would eventually lead to a decline in GPP due to water limitation. Therefore, representing the effects of interactions among hydrology, biogeochemistry and plant physiological ecology on ecosystem carbon, water, and nutrient cycling in global carbon models would improve our predictive capacity for changes in boreal peatland carbon sequestration under changing climates.

Biochar affected by composting with farmyard manure.

PubMed

Prost, Katharina; Borchard, Nils; Siemens, Jan; Kautz, Timo; Séquaris, Jean-Marie; Möller, Andreas; Amelung, Wulf

2013-01-01

Biochar applications to soils can improve soil fertility by increasing the soil's cation exchange capacity (CEC) and nutrient retention. Because biochar amendment may occur with the applications of organic fertilizers, we tested to which extent composting with farmyard manure increases CEC and nutrient content of charcoal and gasification coke. Both types of biochar absorbed leachate generated during the composting process. As a result, the moisture content of gasification coke increased from 0.02 to 0.94 g g, and that of charcoal increased from 0.03 to 0.52 g g. With the leachate, the chars absorbed organic matter and nutrients, increasing contents of water-extractable organic carbon (gasification coke: from 0.09 to 7.00 g kg; charcoal: from 0.03 to 3.52 g kg), total soluble nitrogen (gasification coke: from not detected to 705.5 mg kg; charcoal: from 3.2 to 377.2 mg kg), plant-available phosphorus (gasification coke: from 351 to 635 mg kg; charcoal: from 44 to 190 mg kg), and plant-available potassium (gasification coke: from 6.0 to 15.3 g kg; charcoal: from 0.6 to 8.5 g kg). The potential CEC increased from 22.4 to 88.6 mmol kg for the gasification coke and from 20.8 to 39.0 mmol kg for the charcoal. There were little if any changes in the contents and patterns of benzene polycarboxylic acids of the biochars, suggesting that degradation of black carbon during the composting process was negligible. The surface area of the biochars declined during the composting process due to the clogging of micropores by sorbed compost-derived materials. Interactions with composting substrate thus enhance the nutrient loads but alter the surface properties of biochars. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Neodymium in the oceans: a global database, a regional comparison and implications for palaeoceanographic research

PubMed Central

Griffiths, Alexander M.; Lambelet, Myriam; Little, Susan H.; Stichel, Torben; Wilson, David J.

2016-01-01

The neodymium (Nd) isotopic composition of seawater has been used extensively to reconstruct ocean circulation on a variety of time scales. However, dissolved neodymium concentrations and isotopes do not always behave conservatively, and quantitative deconvolution of this non-conservative component can be used to detect trace metal inputs and isotopic exchange at ocean–sediment interfaces. In order to facilitate such comparisons for historical datasets, we here provide an extended global database for Nd isotopes and concentrations in the context of hydrography and nutrients. Since 2010, combined datasets for a large range of trace elements and isotopes are collected on international GEOTRACES section cruises, alongside classical nutrient and hydrography measurements. Here, we take a first step towards exploiting these datasets by comparing high-resolution Nd sections for the western and eastern North Atlantic in the context of hydrography, nutrients and aluminium (Al) concentrations. Evaluating those data in tracer–tracer space reveals that North Atlantic seawater Nd isotopes and concentrations generally follow the patterns of advection, as do Al concentrations. Deviations from water mass mixing are observed locally, associated with the addition or removal of trace metals in benthic nepheloid layers, exchange with ocean margins (i.e. boundary exchange) and/or exchange with particulate phases (i.e. reversible scavenging). We emphasize that the complexity of some of the new datasets cautions against a quantitative interpretation of individual palaeo Nd isotope records, and indicates the importance of spatial reconstructions for a more balanced approach to deciphering past ocean changes. This article is part of the themed issue ‘Biological and climatic impacts of ocean trace element chemistry’. PMID:29035258

Front-Eddy Influence on Water Column Properties, Phytoplankton Community Structure, and Cross-Shelf Exchange of Diatom Taxa in the Shelf-Slope Area off Concepción (˜36-37°S)

NASA Astrophysics Data System (ADS)

Morales, Carmen E.; Anabalón, Valeria; Bento, Joaquim P.; Hormazabal, Samuel; Cornejo, Marcela; Correa-Ramírez, Marco A.; Silva, Nelson

2017-11-01

In eastern boundary current systems (EBCSs), submesoscale to mesocale variability contributes to cross-shore exchanges of water properties, nutrients, and plankton. Data from a short-term summer survey and satellite time series (January-February 2014) were used to characterize submesoscale variability in oceanographic conditions and phytoplankton distribution across the coastal upwelling and coastal transition zones north of Punta Lavapié, and to explore cross-shelf exchanges of diatom taxa. A thermohaline front (FRN-1) flanked by a mesoscale anticyclonic intrathermocline eddy (ITE-1), or mode-water eddy, persisted during the time series and the survey was undertaken during a wind relaxation event. At the survey time, ITE-1 contributed to an onshore intrusion of warm oceanic waters (southern section) and an offshore advection of cold coastal waters (northern section), with the latter forming a cold, high chlorophyll-a filament. In situ phytoplankton and diatom biomasses were highest at the surface in FRN-1 and at the subsurface in ITE-1, whereas values in the coastal zone were lower and dominated by smaller cells. Diatom species typical of the coastal zone and species dominant in oceanic waters were both found in the FRN-1 and ITE-1 interaction area, suggesting that this mixture was the result of both offshore and onshore advection. Overall, front-eddy interactions in EBCSs could enhance cross-shelf exchanges of coastal and oceanic plankton, as well as sustain phytoplankton growth in the slope area through localized upward injections of nutrients in the frontal zone, combined with ITE-induced advection and vertical nutrient inputs to the surface layer.

Plant Available Nutrients, Barrow, Alaska, Ver. 1

DOE Data Explorer

Sloan, Victoria; Liebig, Jenny; Curtis, Bryan; Hahn, Melanie; Iversen, Colleen; Siegrist, Julie

2014-02-19

This dataset consists of measurements of plant available nutrients made using Plant Root Simulator probes (Western Ag Innovations Inc.) during 2012 and 2013. In 2012, Ca, Mg, K, P, Fe, Mn, Cu, Zn, B, S, Pb, Al, Cd, NO3-N and NH4-N were measured during spring, summer and winter in the centers, edges and troughs of four polygons in each of four areas of contrasting moisture regime and polygon type. In 2013, probes were installed in centers, edges and troughs of four polygons in each of two areas (high-centered and low-centered polygons) at two-week intervals and at 3 soil depths to capture fine-scale season dynamics of NO3-N and NH4-N. PRS probes are ion exchange resin membranes held in plastic supports that are inserted into soil to measure ion supply in situ. The anion and cation exchange with the membrane is intended to mimic plant uptake and thus provide a relevant measure of soil nutrient bioavailability. Measurements are made per area of probe membrane and cannot be converted to concentrations or related to soil volume.

Basal area growth of sugar maple in relation to acid deposition, stand health, and soil nutrients.

PubMed

Duchesne, Louis; Ouimet, Rock; Houle, Daniel

2002-01-01

Previous studies have shown in noncalcareous soils that acid deposition may have increased soil leaching of basic cations above the input rate from soil weathering and atmospheric depositions. This phenomenon may have increased soil acidity levels, and, as a consequence, may have reduced the availability of these essential nutrients for forest growth. Fourteen plots of the Forest Ecosystem Research and Monitoring Network in Québec were used to examine the relation between post-industrial growth trends of sugar maple (Acer saccharum Marsh.) and acid deposition (N and S), stand decline rate, and soil exchangeable nutrient concentrations. Atmospheric N and S deposition and soil exchangeable acidity were positively associated with stand decline rate, and negatively with the average tree basal area increment trend. The growth rate reduction reached on average 17% in declining stands compared with healthy ones. The results showed a significant sugar maple growth rate reduction since 1960 on acid soils. The appearance of the forest decline phenomenon in Québec can be attributed, at least partially, to soil acidification and acid deposition levels.

Simulations of the Viking Gas Exchange Experiment using palagonite and Fe-rich montmorillonite as terrestrial analogs: implications for the surface composition of Mars.

PubMed

Quinn, R; Orenberg, J

1993-10-01

Simulations of the Gas Exchange Experiment (GEX), one of the Viking Lander Biology Experiments, were run using palagonite and Fe-rich montmorillonite as terrestrial analogs of the Martian soil. These terrestrial analogs were exposed to a nutrient solution of the same composition as that of the Viking Landers under humid (no contact with nutrient) and wet (intimate contact) conditions. The headspace gases in the GEX sample cell were sampled and then analyzed by gas chromatography under both humid and wet conditions. Five gases were monitored: CO2, N2, O2, Ar, and Kr. It was determined that in order to simulate the CO2 gas changes of the Viking GEX experiment, the mixture of soil analog mineral plus nutrient medium must be slightly (pH = 7.4) to moderately basic (pH = 8.7). This conclusion suggests constraints upon the composition of terrestrial analogs to the Mars soil; acidic components may be present, but the overall mixture must be basic in order to simulate the Viking GEX results.

Simulations of the Viking gas exchange experiment using palagonite and Fe-rich montmorillonite as terrestrial analogs - Implications for the surface composition of Mars

NASA Astrophysics Data System (ADS)

Quinn, Richard; Orenberg, James

1993-10-01

Simulations of the Gas Exchange Experiment (GEX), one of the Viking Lander Biology Experiments, were run using palagonite and Fe-rich montmorillonite as terrestrial analogs of the Martian soil. These terrestrial analogs were exposed to a nutrient solution of the same composition as that of the Viking Landers under humid (no contact with nutrient) and wet (intimate contact) conditions. The headspace gases in the GEX sample cell were sampled and then analyzed by gas chromatography under both humid and wet conditions. Five gases were monitored: CO2, N2, O2, Ar, and Kr. It was determined that in order to simulate the CO2 gas changes of the Viking GEX experiment, the mixture of soil analog mineral plus nutrient medium must be slightly (pH = 7.4) to moderately basic (pH = 8.7). This conclusion suggests constraints upon the composition of terrestrial analogs of the Mars soil; acidic components may be present, but the overall mixture must be basic in order to simulate the Viking GEX results.

Reverse Estuarine Circulation Due to Local and Remote Wind Forcing, Enhanced by the Presence of Along-Coast Estuaries

NASA Astrophysics Data System (ADS)

Giddings, S. N.; MacCready, P.

2017-12-01

Estuarine exchange flow governs the interaction between oceans and estuaries and thus plays a large role in their biogeochemical processes. This study investigates the variability in estuarine exchange flow due to offshore oceanic conditions including upwelling/downwelling, and the presence of a river plume offshore (from a neighboring estuary). We address these processes via numerical simulations at the mouth of the Salish Sea, a large estuarine system in the Northeast Pacific. An analysis of the Total Exchange Flow indicates that during the upwelling season, the exchange flow is fairly consistent in magnitude and oriented in a positive (into the estuary at depth and out at the surface) direction. However, during periods of downwelling favorable winds, the exchange flow shows significantly more variability including multiple reversals, consistent with observations, and surface intrusions of the Columbia River plume which originates 250 km to the south. Numerical along-strait momentum budgets show that the exchange flow is forced dominantly by the pressure gradients, particularly the baroclinic. The pressure gradient is modified by Coriolis and sometimes advection, highlighting the importance of geostrophy and local adjustments. In experiments conducted without the offshore river plume, reversals still occur but are weaker, and the baroclinic pressure gradient plays a reduced role. These results suggest that estuaries along strong upwelling coastlines should experience significant modulation in the exchange flow during upwelling versus downwelling conditions. Additionally, they highlight the importance of nearby estuaries impacting one-another, not only in terms of connectivity, but also altering the exchange flow.