Sample records for observed mineral assemblages

  1. Heavy mineral assemblages of the Storegga tsunami deposit

    NASA Astrophysics Data System (ADS)

    Cascalho, J.; Costa, P.; Dawson, S.; Milne, F.; Rocha, A.

    2016-04-01

    This study applies heavy mineral analysis to the Storegga tsunami deposit across a range of locations (Whale Firth, Maggie's Kettle Loch and Scatsta Voe) in Shetland (Scotland). The usefulness of this proxy is tested in the identification and characterization of these palaeotsunami units. Furthermore, provenance relationships are established based on the mineralogical content of tsunami deposits and their potential source. Finally, the capability of identifying different phases of tsunami inundation in an 8200 years old tsunami deposit is attempted. Our results show that, overall, tsunamigenic samples presented a clear dominance of garnets and amphiboles. While Whale Firth presented a more balanced distribution between these two mineral groups, in Maggie's Kettle Loch and Scatsta Voe the tsunamigenic samples are dominated by amphiboles (> 90% of transparent heavy minerals). Focusing on the two dominant heavy minerals (garnets and amphiboles) and their vertical variation, one could observe that garnets mimic the heavy mineral concentration variability - higher values at the base and decreasing values to the top. This effect of concentration of the heaviest of the heavy minerals assemblage presents similarities with the formation of beach placer deposits. In fact, based on the heavy mineral vertical variation of the tsunami deposits in Maggie's Kettle Loch, Scatsta Voe and Whale Firth it is possible to conclude that hornblende (most likely amphibole of the assemblage) has the lowest concentration factor indicating that its transport process is more efficient and consequently most of its particles eventually may have moved offshore in the backwash phase of the tsunami. Furthermore, the more platy shape of amphiboles also favours a slower deposition. The opposite can be observed for garnets, which require more energy to be transported (i.e. they are more difficult to entrain by the tsunami waves) and tend to be more easily preserved in the formation of a tsunamigenic

  2. Evidence for low-grade metamorphism, hydrothermal alteration, and diagenesis on Mars from phyllosilicate mineral assemblages

    USGS Publications Warehouse

    Ehlmann, Bethany L.; Mustard, John F; Clark, Roger N.; Swayze, Gregg A.; Murchie, Scott L.

    2011-01-01

    The enhanced spatial and spectral resolution provided by the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) on the Mars Reconnaissance Orbiter (MRO) has led to the discovery of numerous hydrated silicate minerals on Mars, particularly in the ancient, cratered crust comprising the southern highlands. Phases recently identified using visible/near-infrared spectra include: smectite, chlorite, prehnite, high-charge phyllosilicates (illite or muscovite), the zeolite analcime, opaline silica, and serpentine. Some mineral assemblages represent the products of aqueous alteration at elevated temperatures. Geologic occurrences of these mineral assemblages are described using examples from west of the Isidis basin near the Nili Fossae and with reference to differences in implied temperature, fluid composition, and starting materials during alteration. The alteration minerals are not distributed homogeneously. Rather, certain craters host distinctive alteration assemblages: (1) prehnite-chlorite-silica, (2) analcime-silica-Fe,Mg-smectite-chlorite, (3) chlorite-illite (muscovite), and (4) serpentine, which furthermore has been found in bedrock units. These assemblages contrast with the prevalence of solely Fe,Mg-smectites in most phyllosilicate-bearing terrains on Mars, and they represent materials altered at depth then exposed by cratering. Of the minerals found to date, prehnite provides the clearest evidence for subsurface, hydrothermal/metamorphic alteration, as it forms only under highly restricted conditions (T = 200–400ºC). Multiple mechanisms exist for forming the other individual minerals; however, the most likely formation mechanisms for the characteristic mineralogic assemblages observed are, for (1) and (2), low-grade metamorphism or hydrothermal (<400ºC) circulation of fluids in basalt; for (3), transformation of trioctahedral smectites to chlorite and dioctahedral smectites to illite during diagenesis; and for (4), low-grade metamorphism or

  3. Fate of organo-mineral particles in streams: Microbial degradation by streamwater & biofilm assemblages

    NASA Astrophysics Data System (ADS)

    Hunter, W. R.; Raich, M.; Wanek, W.; Battin, T. J.

    2013-12-01

    Inland waters are of global biogeochemical importance. They receive carbon inputs of ~ 4.8 Pg C/ y of which, 12 % is buried, 18 % transported to the oceans, and 70 % supports aquatic secondary production. However, the mechanisms that determine the fate of organic matter (OM) in these systems are poorly defined. One aspect of this is the formation of organo-mineral complexes in aquatic systems and their potential as a route for OM transport and burial vs. their use as carbon (C) and nitrogen (N) sources within aquatic systems. Organo-mineral particles form by sorption of dissolved OM to freshly eroded mineral surfaces and may contribute to ecosystem-scale particulate OM fluxes. We experimentally tested the availability of mineral-sorbed OM as a C & N source for streamwater microbial assemblages and streambed biofilms. Organo-mineral particles were constructed in vitro by sorption of 13C:15N-labelled amino acids to hydrated kaolin particles, and microbial degradation of these particles compared with equivalent doses of 13C:15N-labelled free amino acids. Experiments were conducted in 120 ml mesocosms over 7 days using biofilms and water sampled from the Oberer Seebach stream (Austria). Each incubation experienced a 16:8 light:dark regime, with metabolism monitored via changes in oxygen concentrations between photoperiods. The relative fate of the organo-mineral particles was quantified by tracing the mineralization of the 13C and 15N labels and their incorporation into microbial biomass. Here we present the initial results of 13C-label mineralization, incorporation and retention within dissolved organic carbon pool. The results indicate that 514 (× 219) μmol/ mmol of the 13:15N labeled free amino acids were mineralized over the 7-day incubations. By contrast, 186 (× 97) μmol/ mmol of the mineral-sorbed amino acids were mineralized over a similar period. Thus, organo-mineral complexation reduced amino acid mineralization by ~ 60 %, with no differences observed

  4. Sediment transport mechanisms inferred from heavy mineral assemblages on the 2010 Chilean tsunami deposit

    NASA Astrophysics Data System (ADS)

    Cascalho, João; Costa, Pedro; Lario, Javier

    2017-04-01

    Characterization of heavy mineral (HM) assemblages in tsunami deposits has been applied to infer inundation and backwash phases and to establish sediment sources. In ideal conditions and due to their specific density (>2.9 g/cm3), heavy minerals are the most suitable component of a sediment assemblage that can provide information regarding flow competence. Having these features in consideration, sandy tsunamigenic samples from Arauco and Mataquito areas (central Chile) were retrieved after the 27th of February 2010 tsunami that affected the Chilean coastline. Twenty seven samples (a total of 54 thin sections) tsunamigenic and beach samples were prepared to observe HM under the petrographic microscope. After dividing the samples in 4 fractions (<63 µm, 63- 125 µm, 125-500µm and >500 µm), HM were separated using bromoform and two fractions (63- 125 µm and 125-500µm) were individually mounted using Canada balsam resin on glass slides. About 300 heavy minerals per slide were identified and counted. Both assemblages were mainly composed of magnetite, pyrrhotite, amphiboles, pyroxenes, olivine, micas and zircon (this specie particularly abundant in the finer fraction analyzed). In Arauco (Ar), average HM percentages in the 125-500 µm fraction was 17.9% while in Mataquito (Ma) it was 25.7%. In the 63-125 µm fraction HM average percentages were 36.9% and 56.1%, for Ar and Ma respectively. In the 125-500 µm fraction the percentage of magnetic minerals (the densest of the denser HM) correspond to 13.2% in Ar and 2.7% in Ma. While in the finer fraction these percentages are of 0.24% and 0.1% In Ar it was possible to perceive that the highest concentration in HM and magnetic minerals was observed in the NE sector (Llico) of the embayment, where the highest run-up was observed. In this specific sector an inland decrease of HM and magnetic minerals was detected along a 300m profile, with HM percentages varying from 27% to 9% and magnetic minerals from 16% to 5%, thus

  5. Heavy Minerals in Palaeotsunami Deposits: Assemblages, Spatial Distribution and Microtextural Imprints

    NASA Astrophysics Data System (ADS)

    Costa, P. J.; Andrade, C.; Cascalho, J.; Dawson, A. G.; Freitas, M. C.; Dawson, S.; Mahaney, W. C.

    2013-12-01

    The sedimentological record provides a database useful to characterize and evaluate recurrence of tsunamis, which contributes to assessing the vulnerability of any coastal area to this natural hazard. Thus, the enhancement of our ability to recognize signatures specific of tsunami activity imprinted in coastal sediments is of unquestionable interest. The aim of this study is to discuss and further contribute to the improvement of the characterization of (palaeo)tsunami deposits, and of their source materials. With that purpose the vertical and horizontal distribution of heavy mineral (HM) assemblages in sand-sized tsunamigenic deposits from six locations exhibiting a varied suite of coastal contexts and corresponding to three inundation events -(8200yrs BP - Scotland, 1500yrs BP - Scotland, AD 1755 - Portugal) were studied. In general, results from paleotsunami sediments show that site-specific effects prevent 'blind' extrapolations; instead, the bulk of the HM assemblages reflect local specificities related with the regional geology. In the Portuguese sediments (Martinhal, Boca do Rio and Salgados) ca. 90% of the non-opaque HM population consists of tourmaline, andalusite and staurolite, whereas amphiboles are dominant (> 90% of the assemblage) in the Scottish sediments (Scasta Voe, Basta Voe and Whale Firth). Principal Components Analyses revealed that the first 2 components explain more than 2/3 of the total variance found in each site. Horizontal and vertical variations in the HM were observed and especially in the heavier mineral species. Although, in some of the studied cases, the deposit was macroscopically massive, data on HM allowed the distinction of backwash layer(s), related with incorporation of inland materials. In what concerns sources, results indicate that palaeotsunami sediments share fewer compositional similarities with present-day inshore and offshore materials and more resemblances with dune and beach sediment, thus indicating these as the

  6. A study of the trace sulfide mineral assemblages in the Stillwater Complex, Montana, USA

    NASA Astrophysics Data System (ADS)

    Aird, Hannah M.; Ferguson, Katherine M.; Lehrer, Malia L.; Boudreau, Alan E.

    2017-03-01

    The sulfide assemblages of the Stillwater Complex away from the well-studied ore zones are composed mainly of variable proportions of pyrrhotite, chalcopyrite, pentlandite, and ±pyrite. Excluding vein assemblages and those affected by greenschist and lower temperature alteration, the majority can be classified into two broad assemblages, defined here as pristine (multiphase, often globular in shape) or volatile-bearing (multiphase, high-temperature, volatile-rich minerals such as biotite, hornblende, or an unmixed calcite-dolomite assemblage). The volatile-bearing assemblages are mainly found within and below the J-M reef, where native copper and sphalerite are also locally present. Pristine sulfides are found throughout the stratigraphy. Both groups can be affected by apparent S loss in the form of pyrite being converted to magnetite and chalcopyrite to a Cu-Fe-oxide (delafossite), with little to no silicate alteration. An upward trend from pentlandite-rich to pyrrhotite-rich to pyrite-rich assemblages is observed in the footwall rocks in upper GN-I, and the same trend repeats from just below the reef and continues into the overlying N-II and GN-II. Modeling suggests that the sulfide Ni in the Peridotite Zone is largely controlled by silicate Ni. When taken together, observations are most readily explained by the remobilization of selected elements by a high-temperature fluid with the apparent loss of S > Cu > Ni. This could concentrate ore metals by vapor refining, eventually producing a platinum group element-enriched sulfide ore zone, such as the J-M reef.

  7. Borate mineral assemblages in the system Na2OCaOMgOB2O3H2O

    USGS Publications Warehouse

    Christ, C.L.; Truesdell, A.H.; Erd, Richard C.

    1967-01-01

    he significant known hydrated borate mineral assemblages (principally of the western United States) in the system Na2OCaOz.sbnd;MgOB2O3H2O are expressible in three ternary composition diagrams. Phase rule interpretation of the diagrams is consistent with observation, if the activity of H2O is generally considered to be determined by the geologic environment. The absence of conflicting tie-lines on a diagram indicates that the several mineral assemblages of the diagram were formed under relatively narrow ranges of temperature and pressure. The known structural as well as empirical formulas for the minerals are listed, and the more recent (since 1960) crystal structure findings are discussed briefly. Schematic Gibbs free energy-composition diagrams based on known solubility-temperature relations in the systems Na2B4O7-H2O and Na2B4O7-NaCl-H2O, are highly useful in the interpretation and prediction of the stability relations in these systems; in particular these diagrams indicate clearly that tincalconite, although geologically important, is everywhere a metastable phase. Crystal-chemical considerations indicate that the same thermodynamic and kinetic behavior observed in the Na2B4O7-H2O system will hold in the Ca2B6O11-H2O system. This conclusion is confirmed by the petrologic evidence. The chemical relations among the mineral assemblages of a ternary diagram are expressed by a schematic "activity-activity" diagram. These activity-activity diagrams permit the tracing-out of the paragenetic sequences as a function of changing cation and H2O activities. ?? 1967.

  8. Organo-mineral complexation alters carbon and nitrogen cycling in stream microbial assemblages

    NASA Astrophysics Data System (ADS)

    Hunter, William Ross; Wanek, Wolfgang; Prommer, Judith; Mooshammer, Maria; Battin, Tom

    2014-05-01

    Inland waters are of global biogeochemical importance receiving carbon inputs of ~ 4.8 Pg C y-1. Of this 12 % is buried, 18 % transported to the oceans, and 70 % supports aquatic secondary production. However, the mechanisms that determine the fate of organic matter (OM) in these systems are poorly defined. One important aspect is the formation of organo-mineral complexes in aquatic systems and their potential as a route for OM transport and burial vs. microbial utilization as organic carbon (C) and nitrogen (N) sources. Organo-mineral particles form by sorption of dissolved OM to freshly eroded mineral surfaces and may contribute to ecosystem-scale particulate OM fluxes. We tested the availability of mineral-sorbed OM as a C & N source for streamwater microbial assemblages and streambed biofilms. Organo-mineral particles were constructed in vitro by sorption of 13C:15N-labelled amino acids to hydrated kaolin particles, and microbial degradation of these particles compared with equivalent doses of 13C:15N-labelled free amino acids. Experiments were conducted in 120 ml mesocosms over 7 days using biofilms and streamwater sampled from the Oberer Seebach stream (Austria), tracing assimilation and mineralization of 13C and 15N labels from mineral-sorbed and dissolved amino acids. Here we present data on the effects of organo-mineral sorption upon amino acid mineralization and its C:N stoichiometry. Organo-mineral sorption had a significant effect upon microbial activity, restricting C and N mineralization by both the biofilm and streamwater treatments. Distinct differences in community response were observed, with both dissolved and mineral-stabilized amino acids playing an enhanced role in the metabolism of the streamwater microbial community. Mineral-sorption of amino acids differentially affected C & N mineralization and reduced the C:N ratio of the dissolved amino acid pool. The present study demonstrates that organo-mineral complexes restrict microbial degradation

  9. Clay-mineral assemblages from some levels of K-118 drill core of Maha Sarakham evaporites, northeastern Thailand

    NASA Astrophysics Data System (ADS)

    Suwanich, Parkorn

    Clay-mineral assemblages in Middle Clastic, Middle Salt, Lower Clastic, Potash Zone, and Lower Salt, totalling 13 samples from K-118 drill core, in the Maha Sarakham Formation, Khorat Basin, northeastern Thailand were studied. The clay-size particles were separated from the water-soluble salt by water leaching. Then the samples were leached again in the EDTA solution and separated into clay-size particles by using the timing sedimentation. The EDTA-clay residues were divided and analyzed by using the XRD and XRF method. The XRD peaks show that the major-clay minerals are chlorite, illite, and mixed-layer corrensite including traces of rectorite? and paragonite? The other clay-size particles are quartz and potassium feldspar. The XRF results indicate Mg-rich values and moderate MgAl atom ratio values in those clay minerals. The variable Fe, Na, and K contents in the clay-mineral assemblages can explain the environment of deposition compared to the positions of the samples from the core. Hypothetically, mineralogy and the chemistry of the residual assemblages strongly indicate that severe alteration and Mg-enrichment of normal clay detritus occurred in the evaporite environment through brine-sediment interaction. The various Mg-enrichment varies along the various members reflecting whether sedimentation is near or far from the hypersaline brine.

  10. Minerals and clay minerals assemblages in organic-rich facies: the case study of the Sinemurian-Pliensbachian carbonate deposits of the western Lusitanian Basin (Portugal)

    NASA Astrophysics Data System (ADS)

    Caniço, Ana; Duarte, Luís V.; Silva, Ricardo L.; Rocha, Fernando; Graciano Mendonça Filho, João

    2015-04-01

    The uppermost Sinemurian-Pliensbachian series of the western part of the Lusitanian Basin is composed by hemipelagic carbonates particularly enriched in organic matter. Great part of this succession, considered to be one of the most important potential source rock intervals of Portugal, crops out in the S. Pedro de Moel and Peniche sectors, belonging to the Água de Madeiros and Vale das Fontes formations. In this study, supported by a detailed and integrated stratigraphic framework, we analyzed 98 marly samples (whole-rock mineralogy and clay minerals assemblages) from the aforementioned formations in the S. Pedro de Moel and Peniche sectors. X-ray Diffraction analysis followed the standard procedures and the semi-quantification of the different mineral phases was calculated using MacDiff 4.2.6. The goals of this work are to demonstrate the vertical variability of the mineral composition of these two units and investigate the relationship between the clay minerals assemblages and the content in organic matter (Total organic carbon: TOC). Besides the abundance of calcite and phyllosilicates, whole-rock mineralogy revealed the presence of quartz, potassium feldspar, dolomite, and pyrite (trace amounts). Other minerals like anhydrite, barite and gypsum occur sporadically. The clay minerals assemblages are dominated by illite+illite/smectite mixed-layers (minimum of 59%), always associated with kaolinite (maximum of 37%) and chlorite (maximum of 25%); sporadically smectite occurs in trace amounts. Generally, high TOC levels (i.e., black shale facies with TOC reaching up to 22 wt.% in both units, see Duarte et al., 2010), show a major increase in chlorite and kaolinite (lower values of illite+illite/smectite mixed layers). A kaolinite enrichment is also observed just above the Sinemurian-Pliensbachian boundary (base of Praia da Pedra Lisa Member of Água de Madeiros Formation; values varying between 30 and 37%). This event is associated with a second-order regressive

  11. Diagenesis and clay mineral formation at Gale Crater, Mars

    PubMed Central

    Bridges, J C; Schwenzer, S P; Leveille, R; Westall, F; Wiens, R C; Mangold, N; Bristow, T; Edwards, P; Berger, G

    2015-01-01

    The Mars Science Laboratory rover Curiosity found host rocks of basaltic composition and alteration assemblages containing clay minerals at Yellowknife Bay, Gale Crater. On the basis of the observed host rock and alteration minerals, we present results of equilibrium thermochemical modeling of the Sheepbed mudstones of Yellowknife Bay in order to constrain the formation conditions of its secondary mineral assemblage. Building on conclusions from sedimentary observations by the Mars Science Laboratory team, we assume diagenetic, in situ alteration. The modeling shows that the mineral assemblage formed by the reaction of a CO2-poor and oxidizing, dilute aqueous solution (Gale Portage Water) in an open system with the Fe-rich basaltic-composition sedimentary rocks at 10–50°C and water/rock ratio (mass of rock reacted with the starting fluid) of 100–1000, pH of ∽7.5–12. Model alteration assemblages predominantly contain phyllosilicates (Fe-smectite, chlorite), the bulk composition of a mixture of which is close to that of saponite inferred from Chemistry and Mineralogy data and to that of saponite observed in the nakhlite Martian meteorites and terrestrial analogues. To match the observed clay mineral chemistry, inhomogeneous dissolution dominated by the amorphous phase and olivine is required. We therefore deduce a dissolving composition of approximately 70% amorphous material, with 20% olivine, and 10% whole rock component. PMID:26213668

  12. Diagenesis and clay mineral formation at Gale Crater, Mars

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bridges, J. C.; Schwenzer, S. P.; Leveille, R.

    The Mars Science Laboratory rover Curiosity found host rocks of basaltic composition and alteration assemblages containing clay minerals at Yellowknife Bay, Gale Crater. On the basis of the observed host rock and alteration minerals, we present results of equilibrium thermochemical modeling of the Sheepbed mudstones of Yellowknife Bay in order to constrain the formation conditions of its secondary mineral assemblage. Building on conclusions from sedimentary observations by the Mars Science Laboratory team, we assume diagenetic, in situ alteration. The modeling shows that the mineral assemblage formed by the reaction of a CO₂-poor and oxidizing, dilute aqueous solution (Gale Portage Water)more » in an open system with the Fe-rich basaltic-composition sedimentary rocks at 10–50°C and water/rock ratio (mass of rock reacted with the starting fluid) of 100–1000, pH of ~7.5–12. Model alteration assemblages predominantly contain phyllosilicates (Fe-smectite, chlorite), the bulk composition of a mixture of which is close to that of saponite inferred from Chemistry and Mineralogy data and to that of saponite observed in the nakhlite Martian meteorites and terrestrial analogues. To match the observed clay mineral chemistry, inhomogeneous dissolution dominated by the amorphous phase and olivine is required. We therefore deduce a dissolving composition of approximately 70% amorphous material, with 20% olivine, and 10% whole rock component.« less

  13. Diagenesis and clay mineral formation at Gale Crater, Mars

    DOE PAGES

    Bridges, J. C.; Schwenzer, S. P.; Leveille, R.; ...

    2015-01-18

    The Mars Science Laboratory rover Curiosity found host rocks of basaltic composition and alteration assemblages containing clay minerals at Yellowknife Bay, Gale Crater. On the basis of the observed host rock and alteration minerals, we present results of equilibrium thermochemical modeling of the Sheepbed mudstones of Yellowknife Bay in order to constrain the formation conditions of its secondary mineral assemblage. Building on conclusions from sedimentary observations by the Mars Science Laboratory team, we assume diagenetic, in situ alteration. The modeling shows that the mineral assemblage formed by the reaction of a CO₂-poor and oxidizing, dilute aqueous solution (Gale Portage Water)more » in an open system with the Fe-rich basaltic-composition sedimentary rocks at 10–50°C and water/rock ratio (mass of rock reacted with the starting fluid) of 100–1000, pH of ~7.5–12. Model alteration assemblages predominantly contain phyllosilicates (Fe-smectite, chlorite), the bulk composition of a mixture of which is close to that of saponite inferred from Chemistry and Mineralogy data and to that of saponite observed in the nakhlite Martian meteorites and terrestrial analogues. To match the observed clay mineral chemistry, inhomogeneous dissolution dominated by the amorphous phase and olivine is required. We therefore deduce a dissolving composition of approximately 70% amorphous material, with 20% olivine, and 10% whole rock component.« less

  14. Metamorphic mineral assemblages of slightly calcic pelitic rocks in and around the Taconic Allochthon, southwestern Massachusetts and adjacent Connecticut and New York

    USGS Publications Warehouse

    Zen, E-an

    1981-01-01

    definite interval of prograde metamorphism. 2. Biotite-chloritoid does not constitute an alternative assemblage to garnet-chlorite-muscovite, because the former combination is found predominantly in the presence of the latter combination. Because the garnet contains lime, all five phases are stable together in lowlime pelitic rocks. 3. The first appearance of staurolite in the area does not correspond to the reaction leading to the first intrinsic stable existence of this phase. Inasmuch as the first appearanc,e of staurolite is always in chlorite-bearing as semblages, I suggest that the mapped staurolite zone marker corresponds to a reaction whereby staurolitechlorite becomes stable. The probable lower grade chemical equivalent, for example, chloritoid-aluminum silicate, however, has not been found in the area of study. Several staurolite-forming reactions discussed in the literature are ruled out because of the relative siderophility of the minerals. A second staurolite isograd involves the reaction, chloritoid+chlorite+muscovite= staurolite+biotite. A third isograd involves staurolite+ chlorite=biotite+kyanite; this reaction is postulated on the basis of the observed assemblage biotite-kyanitesta urolite-garnet-muscoviteplagioclase-quartzilmenite. 4. In low-grade rocks, epidote is stable considerably before the first appearance of chloritoid. The nature of the high-aluminum phase in low-grade rocks that leads to the formation of chloritoid remains obscure. The epidote is always rich in ferric iron (pistacite content of about 1/ 4 to 1/3). Garnet-bearing assemblages (with or without epidote) are formed next as metamorphic grade increases. The next more calcium-rich silicate is hornblende, and despite the meager data on assemblages that include hornblende, the first intrinsic appearance of this phase has probably been recorded. At highstaurolite grade, the most calcium-rich assemblage in pelitic rocks is hornblende-garnet-biotite-plagioclase (bytownit

  15. Heterogeneous mineral assemblages in martian meteorite Tissint as a result of a recent small impact event on Mars

    NASA Astrophysics Data System (ADS)

    Walton, E. L.; Sharp, T. G.; Hu, J.; Filiberto, J.

    2014-09-01

    The microtexture and mineralogy of shock melts in the Tissint martian meteorite were investigated using scanning electron microscopy, Raman spectroscopy, transmission electron microscopy and synchrotron micro X-ray diffraction to understand shock conditions and duration. Distinct mineral assemblages occur within and adjacent to the shock melts as a function of the thickness and hence cooling history. The matrix of thin veins and pockets of shock melt consists of clinopyroxene + ringwoodite ± stishovite embedded in glass with minor Fe-sulfide. The margins of host rock olivine in contact with the melt, as well as entrained olivine fragments, are now amorphosed silicate perovskite + magnesiowüstite or clinopyroxene + magnesiowüstite. The pressure stabilities of these mineral assemblages are ∼15 GPa and >19 GPa, respectively. The ∼200-μm-wide margin of a thicker, mm-size (up to 1.4 mm) shock melt vein contains clinopyroxene + olivine, with central regions comprising glass + vesicles + Fe-sulfide spheres. Fragments of host rock within the melt are polycrystalline olivine (after olivine) and tissintite + glass (after plagioclase). From these mineral assemblages the crystallization pressure at the vein edge was as high as 14 GPa. The interior crystallized at ambient pressure. The shock melts in Tissint quench-crystallized during and after release from the peak shock pressure; crystallization pressures and those determined from olivine dissociation therefore represent the minimum shock loading. Shock deformation in host rock minerals and complete transformation of plagioclase to maskelynite suggest the peak shock pressure experienced by Tissint ⩾ 29-30 GPa. These pressure estimates support our assessment that the peak shock pressure in Tissint was significantly higher than the minimum 19 GPa required to transform olivine to silicate perovskite plus magnesiowüstite. Small volumes of shock melt (<100 μm) quench rapidly (0.01 s), whereas thermal equilibration will

  16. Analysis of Mineral Assemblages Containing Unstable Hydrous Phases

    NASA Astrophysics Data System (ADS)

    Vaniman, D. T.; Wilson, S. A.; Bish, D. L.; Chipera, S.

    2011-12-01

    for sampling cold-environment deposits at the lunar poles, at the poles of Mercury, on icy satellites, and on many other bodies that may host hydrous minerals. The problem of adequate in situ analysis of such mutable assemblages extends to Earth as well, for example in the need for improved understanding of polar and permafrost regions, deep sea clathrates, cave minerals, and mine dump efflorescence. Advanced methods of in situ analysis are needed, including but not limited to contact instruments and instrumentation that can be inserted by probe or operated within a borehole that could be advanced with minimal thermal disturbance. One of the lessons of robotic analysis is that field instruments, which by necessity are less capable than laboratory equivalents, provide greatly improved interpretations if data from several different instruments can be compared.

  17. Soil mineral assemblage influences on microbial communities and carbon cycling under fresh organic matter input

    NASA Astrophysics Data System (ADS)

    Finley, B. K.; Schwartz, E.; Koch, B.; Dijkstra, P.; Hungate, B. A.

    2017-12-01

    The interactions between soil mineral assemblages and microbial communities are important drivers of soil organic carbon (SOC) cycling and storage, although the mechanisms driving these interactions remain unclear. There is increasing evidence supporting the importance of associations with poorly crystalline, short-range order (SRO) minerals in protection of SOC from microbial utilization. However, how the microbial processing of SRO-associated SOC may be influenced by fresh organic matter inputs (priming) remains poorly understood. The influence on SRO minerals on soil microbial community dynamics is uncertain as well. Therefore, we conducted a priming incubation by adding either a simulated root exudate mixture or conifer needle litter to three soils from a mixed-conifer ecosystem. The parent material of the soils were andesite, basalt, and granite and decreased in SRO mineral content, respectively. We also conducted a parallel quantitative stable isotope probing incubation by adding 18O-labelled water to the soils to isotopically label microbial DNA in situ. This allowed us to characterize and identify the active bacterial and archaeal community and taxon-specific growth under fresh organic matter input. While the granite soil (lowest SRO content), had the largest total mineralization, the least priming occurred. The andesite and basalt soils (greater SRO content) had lower total respiration, but greater priming. Across all treatments, the granite soil, while having the lowest species richness of the entire community (249 taxa, both active and inactive), had a larger active community (90%) in response to new SOC input. The andesite and basalt soils, while having greater total species richness of the entire community at 333 and 325 taxa, respectively, had fewer active taxa in response to new C compared to the granite soil (30% and 49% taxa, respectively). These findings suggest that the soil mineral assemblage is an important driver on SOC cycling under fresh

  18. Approaches to modelling uranium (VI) adsorption on natural mineral assemblages

    USGS Publications Warehouse

    Waite, T.D.; Davis, J.A.; Fenton, B.R.; Payne, T.E.

    2000-01-01

    Component additivity (CA) and generalised composite (GC) approaches to deriving a suitable surface complexation model for description of U(VI) adsorption to natural mineral assemblages are pursued in this paper with good success. A single, ferrihydrite-like component is found to reasonably describe uranyl uptake to a number of kaolinitic iron-rich natural substrates at pH > 4 in the CA approach with previously published information on nature of surface complexes, acid-base properties of surface sites and electrostatic effects used in the model. The GC approach, in which little pre-knowledge about generic surface sites is assumed, gives even better fits and would appear to be a method of particular strength for application in areas such as performance assessment provided the model is developed in a careful, stepwise manner with simplicity and goodness of fit as the major criteria for acceptance.

  19. Mineral assemblage transformation of a metakaolin-based waste form after geopolymer encapsulation

    NASA Astrophysics Data System (ADS)

    Williams, Benjamin D.; Neeway, James J.; Snyder, Michelle M. V.; Bowden, Mark E.; Amonette, James E.; Arey, Bruce W.; Pierce, Eric M.; Brown, Christopher F.; Qafoku, Nikolla P.

    2016-05-01

    Mitigation of hazardous and radioactive waste can be improved through conversion of existing waste to a more chemically stable and physically robust waste form. One option for waste conversion is the fluidized bed steam reforming (FBSR) process. The resulting FBSR granular material was encapsulated in a geopolymer matrix referred to here as Geo-7. This provides mechanical strength for ease in transport and disposal. However, it is necessary to understand the phase assemblage evolution as a result of geopolymer encapsulation. In this study, we examine the mineral assemblages formed during the synthesis of the multiphase ceramic waste form. The FBSR granular samples were created from waste simulant that was chemically adjusted to resemble Hanford tank waste. Another set of samples was created using Savannah River Site Tank 50 waste simulant in order to mimic a blend of waste collected from 68 Hanford tank. Waste form performance tests were conducted using the product consistency test (PCT), the Toxicity Characteristic Leaching Procedure (TCLP), and the single-pass flow-through (SPFT) test. X-ray diffraction analyses revealed the structure of a previously unreported NAS phase and indicate that monolith creation may lead to a reduction in crystallinity as compared to the primary FBSR granular product.

  20. Mineral assemblage transformation of a metakaolin-based waste form after geopolymer encapsulation

    DOE PAGES

    Williams, Benjamin D.; Neeway, James J.; Snyder, Michelle M. V.; ...

    2015-12-23

    We can improve mitigation of hazardous and radioactive waste through conversion of existing waste to a more chemically stable and physically robust waste form. One option for waste conversion is the fluidized bed steam reforming (FBSR) process. The resulting FBSR granular material was encapsulated in a geopolymer matrix referred to here as Geo-7. This provides mechanical strength for ease in transport and disposal. But, it is necessary to understand the phase assemblage evolution as a result of geopolymer encapsulation. In this study, we examine the mineral assemblages formed during the synthesis of the multiphase ceramic waste form. The FBSR granularmore » samples were created from waste simulant that was chemically adjusted to resemble Hanford tank waste. Another set of samples was created using Savannah River Site Tank 50 waste simulant in order to mimic a blend of waste collected from 68 Hanford tank. Waste form performance tests were conducted using the product consistency test (PCT), the Toxicity Characteristic Leaching Procedure (TCLP), and the single-pass flow-through (SPFT) test. Finally, X-ray diffraction analyses revealed the structure of a previously unreported NAS phase and indicate that monolith creation may lead to a reduction in crystallinity as compared to the primary FBSR granular product.« less

  1. INDICES OF TAXON-BY-TAXON DISAGREEMENT BETWEEN OBSERVED AND EXPECTED ASSEMBLAGES

    EPA Science Inventory

    RIVPACS-type models infer impairment from the level of disagreement between observed and expected assemblages. The popular O/E index measures the disagreement between the observed and expected number of taxa. Thus, O/E ignores the additional information offered by a taxon-by-taxo...

  2. On protolith-, metamorphic overprint, microstructure and rheology of mineral assemblages in orogenic peridotites of the central Scandinavian Caledonides

    NASA Astrophysics Data System (ADS)

    Gilio, Mattia; Clos, Frediano; Van Roermund, Herman L. M.

    2013-04-01

    The Scandinavian Caledonides (SC) are a deeply eroded Alpine-type orogenic belt formed by closure of the Iapetus ocean and collision between Baltica and Laurentia (500-380 Ma). The SC consists of a stack of Nappe Complexes (from bottom to top called Lower, Middle, Upper and Uppermost Allochthons) thrusted to the east over the Baltic Shield (Brueckner and Van Roermund, 2004; Gee et al., 2008). Fossil lithospheric mantle fragments, called orogenic peridotites, have been found within the (upper part of) middle, upper and uppermost Allochthons, as well as in the reworked basement gneisses (a.o Western Gneiss Complex (WGC)) along the Norwegian west coast. They occur as isolated lenses that contain diverse mineral parageneses and/or bulk rock compositions. Crustal incorporation of orogenic peridotite is classically interpreted to be the result of plate collisional processes related to orogeny (Brueckner and Medaris, 2000). The WGC and parts of the upper part of the Middle Allochthon (a.o. Seve Nappe Complex (SNC) in N Jämtland/S Västerbotten, central Sweden), are well known for the occurrence of high (HP) and ultrahigh pressure (UHP) metamorphic terranes (of Caledonian age). The (U)HPM evidence clearly demonstrates the deep metamorphic origin of these rocks interpreted to be caused by continental subduction and/or collision. Other metamorphic rocks (of Caledonian age) exposed in allochthonous nappes are solely characterised by greenschist-, amphibolite- and/or MP granulite "facies" mineral assemblages that can be interpreted, in the absence of retrogression, to have formed in less deeply subducted (and/or metamorphic) environments. This duality in metamorphic "facies" allows for a discrimination (at least theoretically) between "deep" versus "shallow" rooted nappes (in central parts of the Scandinavian Caledonides). Conform this reasoning, this duality should also be present within the Caledonian mineral assemblages (= metamorphic overprint) of orogenic peridotites (in

  3. AN INDEX OF COMPOSITIONAL DISSIMILARITY BETWEEN OBSERVED AND EXPECTED ASSEMBLAGES

    EPA Science Inventory

    The reference-condition approach to bioassessment often uses the observed/expected (O/E) ratio to indicate anthropogenic alteration of aquatic macroinvertebrates, fish, or periphyton assemblages. Given a list of taxa found at 1 or more minimally disturbed reference sites, E is t...

  4. Discrimination of hydrothermal alteration mineral assemblages at Virginia City, Nevada, using the airborne imaging spectrometer

    NASA Technical Reports Server (NTRS)

    Hutsinpiller, Amy

    1988-01-01

    The purpose of this study is to use airborne imaging spectrometer data to discriminate hydrothermal alteration mineral assemblages associated with silver and gold mineralization at Virginia City, NV. The data is corrected for vertical striping and sample gradients, and converted to flat-field logarithmic residuals. Log residual spectra from areas known to be altered are compared to field spectra for kaolinitic, illitic, sericitic, and propylitic alteration types. The areal distributions of these alteration types are estimated using a spectral matching technique. Both visual examination of spectra and the matching techniques are effective in distinguishing kaolinitic, illitic, and propylitic alteration types from each other. However, illitic and sericitic alteration cannot be separated using these techniques because the spectra of illite and sericite are very similar. A principal components analysis of 14 channels in the 2.14-2.38 micron wavelength region is also successful in discriminating and mapping illitic, kaolinitic, and propylitic alteration types.

  5. Alteration minerals in impact-generated hydrothermal systems - Exploring host rock variability

    NASA Astrophysics Data System (ADS)

    Schwenzer, Susanne P.; Kring, David A.

    2013-09-01

    Impact-generated hydrothermal systems have been previously linked to the alteration of Mars’ crust and the production of secondary mineral assemblages seen from orbit. The sensitivity of the resultant assemblages has not yet been evaluated as a function of precursor primary rock compositions. In this work, we use thermochemical modeling to explore the variety of minerals that could be produced by altering several known lithologies based on martian meteorite compositions. For a basaltic host rock lithology (Dhofar 378, Humphrey) the main alteration phases are feldspar, zeolite, pyroxene, chlorite, clay (nontronite, kaolinite), and hematite; for a lherzolithic host rock lithology (LEW 88516) the main alteration phases are amphibole, serpentine, chlorite, clay (nontronite, kaolinite), and hematite; and for an ultramafic host rock lithology (Chassigny) the main minerals are secondary olivine, serpentine, magnetite, quartz, and hematite. These assemblages and proportions of phases in each of those cases depend on W/R and temperature. Integrating geologic, hydrologic and alteration mineral evidence, we have developed a model to illustrate the distribution of alteration assemblages that occur in different levels of an impact structure. At the surface, hot, hydrous alteration affects the ejecta and melt sheet producing clay and chlorite. Deeper in the subsurface and depending on the permeability of the rock, a variety of minerals - smectite, chlorite, serpentine, amphiboles and hematite - are produced in a circulating hydrothermal system. These modeled mineral distributions should assist with interpretation of orbital observations and help guide surface exploration by rovers and sample return assets.

  6. Syn- and post-sedimentary controls on clay mineral assemblages in a tectonically active basin, Andean Argentinean foreland

    NASA Astrophysics Data System (ADS)

    Do Campo, Margarita; Nieto, Fernando; del Papa, Cecilia; Hongn, Fernando

    2014-07-01

    In the northern part of the Calchaquí Valley (NW Argentina), Palaeogene Andean foreland sediments are represented by a 1400-metre-thick continental succession (QLC: Quebrada de Los Colorados Formation) consisting of claystones, siltstones, sandstones, and conglomerates representing sedimentation in fluvial-alluvial plains and alluvial fan settings. To understand the main syn- and postsedimentary variables controlling the clay mineral assemblages of this succession, we have studied the fine-grained clastic sediments by X-ray diffraction and electron microscopy, along with a detailed sedimentary facies analysis, for two representative sections. In the northern section, the whole succession was sampled and analysed by XRD, whereas in the second section, a control point 15 km to the south, only the basal levels were analysed. The XRD study revealed a strong contrast in clay mineral assemblages between these two sections as well as with sections in the central Calchaquí Valley studied previously. In the northernmost part of the study area, a complete evolution from smectite at the top to R3 illite/smectite mixed-layers plus authigenic kaolinite at the bottom, through R1-type mixed-layers in between, has been recognized, indicating the attainment of late diagenesis. In contrast, the clay mineral assemblages of equivalent foreland sediments cropping out only 15 km to the south contain abundant smectite and micas, subordinate kaolinite and chlorite, and no I/S mixed-layers to the bottom of the sequence. Early diagenetic conditions were also inferred in a previous study for equivalent sediments of the QLC Formation cropping out to the south, in the central Calchaquí Valley, as smectite occurs in basal strata. Burial depths of approximately 3000 m were estimated for the QLC Formation in the central and northern Calchaquí Valley; in addition, an intermediate to slightly low geothermal gradient can be considered likely for both areas as foreland basins are regarded as

  7. Direct Visualization of Aggregate Morphology and Dynamics in a Model Soil Organic–Mineral System

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hufschmid, Ryan; Newcomb, Christina J.; Grate, Jay W.

    Interactions between mineral surfaces and organic matter are ubiquitous in soils and the environment. Through both physical and chemical mechanisms, organic-mineral assemblages prevent decomposition of soil organic matter by limiting accessibility or reducing efficacy of enzymes and microbes. To understand the mechanisms underlying organic-mineral interactions, researchers have begun to interrogate these systems at smaller length scales. Current techniques that maintain a hydrated state and allow researchers to characterize nanometer length scales are limited. Here we chose a model organic-mineral system and performed complementary imaging techniques that enable direct nanoscale observations in environmentally relevant conditions: cryogenic TEM and in-situ liquid cellmore » TEM. We observed a three-fold increase in aggregate size of goethite nanoparticles upon addition of a model organic phosphate ligand and quantification of nanoparticle orientation reveals a preference for side-to-side interactions independent of the addition of an organic ligand. Additionally, in-situ liquid cell TEM experiments provides a dynamic view of the interactions allowing us to report velocities of mineral assemblages during aggregation and disaggregation, which could potentially provide binding energetics and kinetic parameters about organic-mineral and mineral-mineral systems.« less

  8. Eudialyte Composition and Decomposition Assemblage of the Sushina Syenite Gneisss, India

    NASA Astrophysics Data System (ADS)

    Chakrabarty, A.; Ren, M.

    2012-12-01

    Eudialyte group of minerals (EGM) were not recognized from the Indian subcontinent until recently an occurrence of eudialyte bearing nepheline syenite from the Sushina Hill region of West Bengal is made. The rocks of the Sushina hill region had undergone poly-phase post formational magmato-thermal activity and the studied unit of nepheline syenite can be better termed as 'nepheline syenite gneiss' in their present form. This under saturated syenite gneiss is present as intrusive body and hosted by the phyllites and schists of the Proterozoic Chandil Formation covering an area of about 1500m2. There is not much information available on the detailed mineralogy of this nepheline gneiss. The main purpose of this study is to present precise in-depth chemistry of the individual minerals with special emphasis on the EGM along with the decomposition assemblage(s) formed after eudialyte. The ortho-, late- and post-magmatic assemblages were observed throughout the studied unit of syenite gneiss. The ortho-magmatic assemblage is defined by the discrete subhedral grains of albite, orthoclase, nepheline and aegirine. Compositionally all the feldspars represent near end-member compositions. Nepheline compositions are falling well within the range of Morozewicz-Buerger convergence field for plutonic low-temperature nepheline. Eudialyte is the dominant phase associated with the late-magmatic assemblage. Anhedral aegirine grains are frequently present within the complex aggregate of eudialyte and related decomposition assemblages which indicate that the aegirine predates eudialyte during the crystallization history. The studied EGM are essentially Mn-Nb-Ca-Zr rich variety and comparable to the other occurrences of the Ilímaussaq (Greenland), Tamazeght (Morocco), Mont-Saint Hilaire (Canada) and Pilansberg (South Africa). The studied eudialytes are characterized by very high Mn content (6.6-9.7 wt.%) relative to all other eudialyte reported world-wide. Such Mn-rich eudialytes are

  9. Intrinsic qualities of primate bones as predictors of skeletal element representation in modern and fossil carnivore feeding assemblages.

    PubMed

    Carlson, Kristian J; Pickering, Travis Rayne

    2003-04-01

    Plio-Pleistocene faunal assemblages from Swartkrans Cave (South Africa) preserve large numbers of primate remains. Brain, C.K., 1981. The Hunters or the Hunted? An Introduction to African Cave Taphonomy. University of Chicago Press, Chicago suggested that these primate subassemblages might have resulted from a focus by carnivores on primate predation and bone accumulation. Brain's hypothesis prompted us to investigate, in a previous study, this taphonomic issue as it relates to density-mediated destruction of primate bones (J. Archaeol. Sci. 29, 2002, 883). Here we extend our investigation of Brain's hypothesis by examining additional intrinsic qualities of baboon bones and their role as mediators of skeletal element representation in carnivore-created assemblages. Using three modern adult baboon skeletons, we collected data on four intrinsic bone qualities (bulk bone mineral density, maximum length, volume, and cross-sectional area) for approximately 81 bones per baboon skeleton. We investigated the relationship between these intrinsic bone qualities and a measure of skeletal part representation (the percentage minimum animal unit) for baboon bones in carnivore refuse and scat assemblages. Refuse assemblages consist of baboon bones not ingested during ten separate experimental feeding episodes in which individual baboon carcasses were fed to individual captive leopards and a spotted hyena. Scat assemblages consist of those baboon bones recovered in carnivore regurgitations and feces resulting from the feeding episodes. In refuse assemblages, volume (i.e., size) was consistently the best predictor of element representation, while cross-sectional area was the poorest predictor in the leopard refuse assemblage and bulk bone mineral density (i.e., a measure of the proportion of cortical to trabecular bone) was the poorest predictor in the hyena refuse assemblage. In light of previous documentation of carnivore-induced density-mediated destruction to bone assemblages

  10. Calc-silicate mineralization in active geothermal systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bird, D.K.; Schiffman, P.; Elders, W.A.

    The detailed study of calc-silicate mineral zones and coexisting phase relations in the Cerro Prieto geothermal system were used as examples for thermodynamic evaluation of phase relations among minerals of variable composition and to calculate the chemical characteristics of hydrothermal solutions compatible with the observed calc-silicate assemblages. In general there is a close correlation between calculated and observed fluid compositions. Calculated fugacities of O{sub 2} at about 320{degrees}C in the Cerro Prieto geothermal system are about five orders of magnitude less than that at the nearby Salton Sea geothermal system. This observation is consistent with the occurrence of Fe{sup 3+}more » rich epidotes in the latter system and the presence of prehnite at Cerro Prieto.« less

  11. The origin of the Avram Iancu U-Ni-Co-Bi-As mineralization, Băiţa (Bihor) metallogenic district, Bihor Mts., Romania

    NASA Astrophysics Data System (ADS)

    Zajzon, Norbert; Szentpéteri, Krisztián; Szakáll, Sándor; Kristály, Ferenc

    2015-10-01

    -sulfarsenide solid solutions associated with minute but abundant uranium minerals. Within the later arsenide-sulfarsenide mineral assemblage, there is great variation in Ni, Co, and S content with generally increasing arsenic content. Uranium minerals in this late-stage assemblage include very fine euhedral uraninite and brannerite inclusions in arsenide-sulfarsenide minerals. Native bismuth and Bi-sulfosalt krupkaite are observed in this As-S-rich assemblage strongly associated with cobaltite.

  12. The fate of iron on Mars: Mechanism of oxidation of basaltic minerals to ferric-bearing assemblages

    NASA Technical Reports Server (NTRS)

    Burns, Roger G.

    1992-01-01

    Perhaps the most conspicuous indication that chemical weathering has occurred on the surface of Mars is the overall color of the red planet and the spectroscopic features that identify ferric-bearing assemblages in the martian regolith. Apparently, Fe(2+) ions in primary minerals in parent igneous rocks on the martian surface have been oxidized to ferric iron, which occurs in degradation products that now constitute the regolith. The mineralogy of the unweathered igneous rocks prior to weathering on the martian surface is reasonably well constrained, mainly as a result of petrographic studies of the SNC meteorites. However, the alteration products resulting from oxidative weathering of these rocks are less well-constrained. The topics covered include the following: primary rocks subjected to chemical weathering; dissolution processes; oxidation of dissolved Fe(2+); mechanism of polymerization of hydrous ferric oxides; terrestrial occurrences of ferromagnesian smectites; and dehydroxylated Mg-Fe smectites on Mars.

  13. Long-term controls on continental-scale bedrock river terrace deposition from integrated clast and heavy mineral assemblage analysis: An example from the lower Orange River, Namibia

    NASA Astrophysics Data System (ADS)

    Nakashole, Albertina N.; Hodgson, David M.; Chapman, Robert J.; Morgan, Dan J.; Jacob, Roger J.

    2018-02-01

    Establishing relationships between the long-term landscape evolution of drainage basins and the fill of sedimentary basins benefits from analysis of bedrock river terrace deposits. These fragmented detrital archives help to constrain changes in river system character and provenance during sediment transfer from continents (source) to oceans (sink). Thick diamondiferous gravel terrace deposits along the lower Orange River, southern Namibia, provide a rare opportunity to investigate controls on the incision history of a continental-scale bedrock river. Clast assemblage and heavy mineral data from seven localities permit detailed characterisation of the lower Orange River gravel terrace deposits. Two distinct fining-upward gravel terrace deposits are recognised, primarily based on mapped stratigraphic relationships (cross-cutting relationships) and strath and terrace top elevations, and secondarily on the proportion of exotic clasts, referred to as Proto Orange River deposits and Meso Orange River deposits. The older early to middle Miocene Proto Orange River gravels are thick (up to 50 m) and characterised by a dominance of Karoo Supergroup shale and sandstone clasts, whereas the younger Plio-Pleistocene Meso Orange River gravels (6-23 m thick) are characterised by more banded iron formation clasts. Mapping of the downstepping terraces indicates that the Proto gravels were deposited by a higher sinuosity river, and are strongly discordant to the modern Orange River course, whereas the Meso deposits were deposited by a lower sinuosity river. The heavy minerals present in both units comprise magnetite, garnet, amphibole, epidote and ilmenite, with rare titanite and zircon grains. The concentration of amphibole-epidote in the heavy minerals fraction increases from the Proto to the Meso deposits. The decrease in incision depths, recorded by deposit thicknesses above strath terraces, and the differences in clast character (size and roundness) and type between the two

  14. Textural and isotopic development of marble assemblages during the Barrovian-style M2 metamorphic event, Naxos, Greece

    NASA Astrophysics Data System (ADS)

    Baker, Judy; Matthews, Alan

    1994-03-01

    A detailed petrological analysis of the marble assemblages observed within the M2 metamorphic complex on Naxos is presented. Two distinct periods of mineral growth are documented; the first is associated with prograde M2 metamorphism and the second with retrograde M2 metamorphism occurring during ductile extensional thinning of the complex. The textural and miner-alogical characteristics and the carbon and oxygen isotope compositions of each generation are described, and the P-T-X CO 2 conditions at which these two mineral generations were stable, and the compositions of the fluids present during metamorphism are characterised. Whereas the low variance and stable isotope compositions of prograde siliceous dolomite assemblages are consistent with internally buffered fluid evolution, the retrograde mineral generation is shown to have grown as a result of the infiltration of a water-rich fluid phase that transported silica, Al2O3, Na2O and FeO into the host rocks. This observation, together with the stable isotope compositions of the retrograde calcite, and the fact that occurrences of veins of this type are limited to marbles in the highest grade areas ( T>600° C) of the metamorphic complex, suggests that the fluids responsible for vein formation were generated during the crystallisation of melts as the metamorphic complex cooled from peak temperatures. The existence of this second generation of minerals has significant implications for previous studies of heat transport by fluid flow on Naxos, because many of the unusually low δ18O compositions of pelites at high grades may be ascribable to the effects of interaction with retrograde M2 fluids, rather than with prograde fluids.

  15. PERMEABILITY CHANGES IN CRYSTALLINE ROCKS DUE TO TEMPERATURE: EFFECTS OF MINERAL ASSEMBLAGE.

    USGS Publications Warehouse

    Morrow, C.A.; Moore, Diane E.; Byerlee, J.D.; ,

    1985-01-01

    The change in permeability with time of granite, quartzite, anorthosite and gabbro was measured while these rocks were subjected to a temperature gradient. Permeability reductions of up to two orders of magnitude were observed, with the greatest reactions occurring in the quartzite. These changes are thought to be caused by dissolution of minerals at high temperatures, and redeposition of the dissolved material at lower temperatures. Quartz appears to be an important mineral in this self-sealing process. If very low permeability is desired around a nuclear waste repository in crystalline rocks, then a quartz-rich rock may be the most appropriate host.

  16. Late-stage anhydrite-gypsum-siderite-dolomite-calcite assemblages record the transition from a deep to a shallow hydrothermal system in the Schwarzwald mining district, SW Germany

    NASA Astrophysics Data System (ADS)

    Burisch, Mathias; Walter, Benjamin F.; Gerdes, Axel; Lanz, Maximilian; Markl, Gregor

    2018-02-01

    The majority of hydrothermal vein systems of economic interest occur at relatively shallow crustal levels, although many of them formed at significantly greater depths. Their present position is a consequence of uplift and erosion. Although, many aspects of their formation are well constrained, the temporal chemical evolution of such systems during uplift and erosion is still poorly understood. These vein minerals comprise calcite, dolomite-ankerite, siderite-magnesite, anhydrite and gypsum forming the last gangue assemblages in Jurassic and Tertiary sulphide-fluorite-quartz-barite veins of the Schwarzwald mining district, SW Germany. Mineral textures of samples from nine localities reveal that in these sequences, mineral precipitation follows a recurring pattern: early calcite is followed by anhydrite or gypsum, siderite and/or dolomite. This succession may repeat up to three times. In-situ (LA-ICP-MS) U-Pb age dating of 15 carbonates from three subsequent generations of the late-stage vein assemblage yield robust ages between 20 and 0.6 Ma. Each mineral sequence forms in a distinctive period of about 2-5 Ma. These ages clearly relate these late-stage mineral phases to the youngest geological episode of the Schwarzwald, which is associated with the Cenozoic Rhine Graben rifting and basement uplift. Based on thermodynamic modelling, the formation of the observed mineral assemblages required an deeply sourced Mg-, Fe- and SO4-rich fluid (b), which was episodically mixed with a shallow crustal HCO3-rich fluid (a). As a consequence of fluid mixing, concentrations of Mg, Fe and SO4 temporarily increased and initiated the formation of the observed sulphate-carbonate mineral sequences. This discontinuous large-scale vertical fluid mixing was presumably directly related to episodes of active tectonics associated with the Cenozoic strike-slip regime of the Upper Rhine Graben. Analogously, episodic fluid mixing is a major key in the formation of older (Jurassic to early

  17. Benthic foraminiferal assemblage formation: Theory and observation for the European Arctic margin

    NASA Astrophysics Data System (ADS)

    Loubere, Paul; Rayray, Shan

    2016-09-01

    We use theory and observation to determine how benthic foraminiferal populations living in a range of sedimentary microenvironments are translated into fossil assemblages along the continental margin of the European Arctic. We examine downcore stained (cell tracker green and rose Bengal) and total species shell abundances through the sediment mixing (bioturbation) zone. This, in combination with porewater geochemical measurements, allows us to establish zones of production and destruction for species' shells, and deduce how the fossil record is being generated by the living community. For many taxa, shell production is high in the upper, oxic, sedimentary layer, but destruction in this zone is also high. Hence, contribution to the fossil record is biased to more infaunal populations and species. Taxa producing near, or below, the anoxic boundary of the sediments are particularly important to the developing fossil record of the fjord environment. We find that taxon relative and absolute abundances change continuously through the biologically active sediment profile. This has implications for reconstructing paleoenvironments using benthic foraminiferal assemblages, and potentially for the geochemistry of individual fossil taxa.

  18. Benthic foraminiferal assemblage formation: Theory and observation for the European Arctic Margin

    NASA Astrophysics Data System (ADS)

    Loubere, Paul; Rayray, Shan

    2016-07-01

    We use theory and observation to determine how benthic foraminiferal populations living in a range of sedimentary microenvironments are translated into fossil assemblages along the continental margin of the European Arctic. We examine downcore stained (cell tracker green and rose Bengal) and total species shell abundances through the sediment mixing (bioturbation) zone. This, in combination with porewater geochemical measurements, allows us to establish zones of production and destruction for species' shells, and deduce how the fossil record is being generated by the living community. For many taxa, shell production is high in the upper, oxic, sedimentary layer, but destruction in this zone is also high. Hence, contribution to the fossil record is biased to more infaunal populations and species. Taxa producing near, or below, the anoxic boundary of the sediments are particularly important to the developing fossil record of the fjord environment. We find that taxon relative and absolute abundances change continuously through the biologically active sediment profile. This has implications for reconstructing paleoenvironments using benthic foraminiferal assemblages, and potentially for the geochemistry of individual fossil taxa.

  19. Hydrothermal and Diagenetic Mineralization on Mars

    NASA Astrophysics Data System (ADS)

    Ehlmann, B. L.; Quinn, D. P.

    2015-12-01

    Predicted by geophysical modeling, the mineraolgic record of early Mars groundwater has only recently been discovered. First, rover exploration in sedimentary basins reveals diagenesis. At Meridiani, sandstone porosity is occluded by precipitation of secondary sulfates, hematite, and silica. Multiple alteration episodes are indicated by crystal vugs, disruption of preexisting textures by hematite concretions, and grain coatings (e.g. McLennan et al., 2005). At Gale crater, raised ridges in mudstones, interpreted to be early diagenetic features, are crossed by later-emplaced hydrated calcium sulfate veins (e.g. Grotzinger et al., 2014). Waters in Gale were likely circumneutral while jarosite mineralogy at Meridiani implies acidic waters. Second, systems of raised ridges at 100-m scale are observed from orbit in multiple Martian sedimentary rock units. An outstanding example is sulfate-bearing sediments exhumed at the northern margin of the Syrtis Major lavas (e.g. Quinn & Ehlmann, 2015). Polygonal and with no clearly preferred orientation, the ridges rise 5-30 m above the surrounding terrain. Parallel light-toned grooves with dark interiors (indicative of isopachous fills) and jarosite in ridge mineralogy point to mineralization by acidic waters. Third, some mineral assemblages observed from orbit represent the products of subsurface aqueous alteration at elevated temperatures (Ehlmann et al., 2011). These are globally distributed, exposed in scarps and by impact cratering. Mineral assemblages variously include (a) serpentine and carbonate; (b) prehnite and chlorite, and (c) zeolites. Collectively, these datasets indicate that groundwaters were spatially widespread on ancient Mars, contributing to the sustenance of lakes and to the alteration of bedrock to >1 km depths. While the Martian surface may have always been relatively inhospitable, a warmer, wetter subsurface provided a long-term potentially habitable environment. Key outstanding questions remaining include

  20. Sulfide-associated mineral assemblages in the Bushveld Complex, South Africa: platinum-group element enrichment by vapor refining by chloride-carbonate fluids

    NASA Astrophysics Data System (ADS)

    Kanitpanyacharoen, W.; Boudreau, A. E.

    2013-02-01

    The petrology of base metal sulfides and associated accessory minerals in rocks away from economically significant ore zones such as the Merensky Reef of the Bushveld Complex has previously received only scant attention, yet this information is critical in the evaluation of models for the formation of Bushveld-type platinum-group element (PGE) deposits. Trace sulfide minerals, primarily pyrite, pyrrhotite, pentlandite, and chalcopyrite are generally less than 100 microns in size, and occur as disseminated interstitial individual grains, as polyphase assemblages, and less commonly as inclusions in pyroxene, plagioclase, and olivine. Pyrite after pyrrhotite is commonly associated with low temperature greenschist alteration haloes around sulfide grains. Pyrrhotite hosted by Cr- and Ti-poor magnetite (Fe3O4) occurs in several samples from the Marginal to Lower Critical Zones below the platiniferous Merensky Reef. These grains occur with calcite that is in textural equilibrium with the igneous silicate minerals, occur with Cl-rich apatite, and are interpreted as resulting from high temperature sulfur loss during degassing of interstitial liquid. A quantitative model demonstrates how many of the first-order features of the Bushveld ore metal distribution could have developed by vapor refining of the crystal pile by chloride-carbonate-rich fluids during which sulfur and sulfide are continuously recycled, with sulfur moving from the interior of the crystal pile to the top during vapor degassing.

  1. 43 CFR 3861.2-1 - Particulars to be observed in mineral surveys.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 43 Public Lands: Interior 2 2012-10-01 2012-10-01 false Particulars to be observed in mineral...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) MINERAL PATENT APPLICATIONS Surveys and Plats § 3861.2-1 Particulars to be observed in mineral surveys. (a) The following...

  2. 43 CFR 3861.2-1 - Particulars to be observed in mineral surveys.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 43 Public Lands: Interior 2 2013-10-01 2013-10-01 false Particulars to be observed in mineral...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) MINERAL PATENT APPLICATIONS Surveys and Plats § 3861.2-1 Particulars to be observed in mineral surveys. (a) The following...

  3. 43 CFR 3861.2-1 - Particulars to be observed in mineral surveys.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 43 Public Lands: Interior 2 2011-10-01 2011-10-01 false Particulars to be observed in mineral...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) MINERAL PATENT APPLICATIONS Surveys and Plats § 3861.2-1 Particulars to be observed in mineral surveys. (a) The following...

  4. 43 CFR 3861.2-1 - Particulars to be observed in mineral surveys.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 43 Public Lands: Interior 2 2014-10-01 2014-10-01 false Particulars to be observed in mineral...) BUREAU OF LAND MANAGEMENT, DEPARTMENT OF THE INTERIOR MINERALS MANAGEMENT (3000) MINERAL PATENT APPLICATIONS Surveys and Plats § 3861.2-1 Particulars to be observed in mineral surveys. (a) The following...

  5. Simulated space weathering of Fe- and Mg-rich aqueously altered minerals using pulsed laser irradiation

    NASA Astrophysics Data System (ADS)

    Kaluna, H. M.; Ishii, H. A.; Bradley, J. P.; Gillis-Davis, J. J.; Lucey, P. G.

    2017-08-01

    Simulated space weathering experiments on volatile-rich carbonaceous chondrites (CCs) have resulted in contrasting spectral behaviors (e.g. reddening vs bluing). The aim of this work is to investigate the origin of these contrasting trends by simulating space weathering on a subset of minerals found in these meteorites. We use pulsed laser irradiation to simulate micrometeorite impacts on aqueously altered minerals and observe their spectral and physical evolution as a function of irradiation time. Irradiation of the mineral lizardite, a Mg-phyllosilicate, produces a small degree of reddening and darkening, but a pronounced reduction in band depths with increasing irradiation. In comparison, irradiation of an Fe-rich aqueously altered mineral assemblage composed of cronstedtite, pyrite and siderite, produces significant darkening and band depth suppression. The spectral slopes of the Fe-rich assemblage initially redden then become bluer with increasing irradiation time. Post-irradiation analyses of the Fe-rich assemblage using scanning and transmission electron microscopy reveal the presence of micron sized carbon-rich particles that contain notable fractions of nitrogen and oxygen. Radiative transfer modeling of the Fe-rich assemblage suggests that nanometer sized metallic iron (npFe0) particles result in the initial spectral reddening of the samples, but the increasing production of micron sized carbon particles (μpC) results in the subsequent spectral bluing. The presence of npFe0 and the possible catalytic nature of cronstedtite, an Fe-rich phyllosilicate, likely promotes the synthesis of these carbon-rich, organic-like compounds. These experiments indicate that space weathering processes may enable organic synthesis reactions on the surfaces of volatile-rich asteroids. Furthermore, Mg-rich and Fe-rich aqueously altered minerals are dominant at different phases of the aqueous alteration process. Thus, the contrasting spectral slope evolution between the Fe

  6. Behaviour of phase functions of Olivine and Augite assemblages in the wavelength range 0.3-18 μm

    NASA Astrophysics Data System (ADS)

    Salgueiro da Silva, M. A.; Seixas, T. M.; Maturilli, A.; Helbert, J.

    2017-09-01

    We tested the validity of the wavelength-independent phase function assumption by measuring BDR of olivine and augite mineral assemblages in the extended spectral range 0.3-18 μm. Because quasi-isotropic scattering is present in both OL and AUG assemblages with grain-size dependent features, it is not clear that this is an intrinsic effect attributed to the wavelength dependence of the optical constants of olivine and augite minerals. Our results show that the application of Hapke model to olivine and augite BDR spectra in the MIR range requires a wavelength- and, possibly, grain size-dependent phase function.

  7. Analysis of mixed-layer clay mineral structures

    USGS Publications Warehouse

    Bradley, W.F.

    1953-01-01

    Among the enormously abundant natural occurrences of clay minerals, many examples are encountered in which no single specific crystallization scheme extends through a single ultimate grain. The characterization of such assemblages becomes an analysis of the distribution of matter within such grains, rather than the simple identification of mineral species. It having become established that the particular coordination complex typified by mica is a common component of many natural subcrystalline assemblages, the opportunity is afforded to analyze scattering from random associations of these complexes with other structural units. Successful analyses have been made of mixed hydration states of montmorillonite, of montmorillonite with mica, of vermiculite with mica, and of montmorillonite with chlorite, all of which are variants of the mica complex, and of halloysite with hydrated halloysite.

  8. 57Fe Mössbauer spectroscopy of mineral assemblages in mantle spinel lherzolites from Cenozoic alkali basalt, eastern China: Petrological applications

    NASA Astrophysics Data System (ADS)

    Hao, Xi-Luo; Li, Yi-Liang

    2013-01-01

    Mineral assemblages in spinel lherzolite xenoliths from the Cenozoic alkali basalt of eastern China were analyzed by 57Fe Mössbauer spectroscopy for Fe3+/ΣFe and distribution of Fe2+/Fe3+ in non-equivalent crystal cites. Orthopyroxene, clinopyroxene and spinel have 0.08-0.13, 0.19-0.31 and 0.13-0.23 Fe3+/ΣFe, respectively. The cation-exchange equilibrium temperatures, Fe3+ partition coefficient and oxygen fugacity of the upper mantle peridotites were calculated. The equilibrium temperatures are between 1103 K and 1405 K consistent with those reported elsewhere. The oxygen fugacities of spinel lherzolites calculated with olivine-orthopyroxene-spinel (ΔlogƒO2 from - 1.1 to 0) and clinopyroxene-olivine-orthopyroxene oxybarometers (ΔlogƒO2 from - 2.0 to 0.7) are consistent with previously reported upper mantle values.

  9. Brecciated and mineralized coals in Union County Western Kentucky coal field

    USGS Publications Warehouse

    Hower, J.C.; Williams, D.A.; Eble, C.F.; Sakulpitakphon, T.; Moecher, D.P.

    2001-01-01

    Coals from the D-2 and D-3 boreholes in the Grove Center 7 1/2 min quadrangle, Union County, KY, have been found to be highly brecciated and mineralized. The mineralization is dominated by a carbonate assemblage with minor sulfides and sulfates. Included among the secondary minerals is the lead selenide, clausthalite. Overall, the emplacement of secondary vein minerals was responsible for raising the rank of the coals from the 0.6-0.7% Rmax range found in the area to as high as 0.95-0.99% Rmax. A 1.3-m-thick coal found in one of the boreholes is unique among known Western Kentucky coals in having less than 50% vitrinite. Semifusinite and fusinite dominate the maceral assemblages. The coal is also low in sulfur coal, which is unusual for the Illinois Basin. It has an ash yield of less than 10%; much of it dominated by pervasive carbonate veining. The age of the thick coal in core D-2 is similar to that of the Elm Lick coal bed, found elsewhere in the Western Kentucky coalfield. The coals in D-3 are younger, having Stephanian palynomorph assemblages. ?? 2001 Elsevier Science B.V. All rights reserved.

  10. The mangazeya Ag-Pb-Zn vein deposit hosted in sedimentary rocks, Sakha-Yakutia, Russia: Mineral assemblages, fluid inclusions, stable isotopes (C, O, S), and origin

    NASA Astrophysics Data System (ADS)

    Anikina, E. Yu.; Bortnikov, N. S.; Klubnikin, G. K.; Gamyanin, G. N.; Prokof'ev, V. Yu.

    2016-05-01

    The succession of mineral assemblages, chemistry of gangue and ore minerals, fluid inclusions, and stable isotopes (C, O, S) in minerals have been studied in the Mangazeya silver-base-metal deposit hosted in terrigenous rocks of the Verkhoyansk Fold-Thrust Belt. The deposit is localized in the junction zone of the Kuranakh Anticlinorium and the Sartanga Synclinorium at the steep eastern limb of the Endybal Anticline. The deposit is situated at the intersection of the regional Nyuektame and North Tirekhtyakh faults. Igneous rocks are represented by the Endybal massif of granodiorite porphyry 97.8 ± 0.9 Ma in age and dikes varying in composition. One preore and three types of ore mineralization separated in space are distinguished: quartz-pyrite-arsenopyrite (I), quartz-carbonate-sulfide (II), and silver-base-metal (III). Quartz and carbonate (siderite) are predominant in ore veins. Ore minerals are represented by arsenopyrite, pyrite, sphalerite, galena, fahlore, and less frequent sulfosalts. Three types of fluid inclusions in quartz differ in phase compositions: two- or three-phase aqueous-carbon dioxide (FI I), carbon dioxide gas (FI II), and two-phase (FI III) containing liquid and a gas bubble. The homogenization temperature and salinity fall within the ranges of 367-217°C and 13.8-2.6 wt % NaCl equiv in FI I; 336-126°C and 15.4-0.8 wt % NaCl equiv in FI III. Carbon dioxide in FI II was homogenized in gas at +30.2 to +15.3°C and at +27.2 to 29.0°C in liquid. The δ34S values for minerals of type I range from-1.8 to +4.7‰ (V-CDT); of type II, from-7.4 to +6.6‰; and of type III, from-5.6 to +7.1‰. δ13C and δ18O vary from-7.0 to-6.7‰ (V-PDB) and from +16.6 to +17.1 (V-SMOW) in siderite-I; from-9.1 to-6.9‰ (V-PDB) and from +14.6 to +18.9 (V-SMOW) in siderite-II; from-5.4 to-3.1‰ (V-PDB) and from +14.6 to +19.5 (V-SMOW) in ankerite; and from-4.2 to-2.9‰ (V-PDB) and from +13.5 to +16.8 (V-SMOW) in calcite. The data on mineral assemblages, fluid

  11. Occurrence modes of As, Sb, Te, Bi, Ag in sulfide assemblages of gold deposits of the Urals

    NASA Astrophysics Data System (ADS)

    Vikent'eva, O.; Vikentev, I.

    2016-04-01

    Review of occurrence modes of trace toxic elements ("potential pollutants") in ores from large gold deposits (the Urals) of different genetic types is presented. Mineral forms of these elements as well as their presence in main minerals from gold-bearing sulfide assemblages according to SEM, EPMA, INAA, ICP-MS and LA-ICP-MS are demonstrated.

  12. Local variation of inundation, sedimentary characteristics, and mineral assemblages of the 2011 Tohoku-oki tsunami on the Misawa coast, Aomori, Japan

    NASA Astrophysics Data System (ADS)

    Nakamura, Yugo; Nishimura, Yuichi; Putra, Purna Sulastya

    2012-12-01

    The 2011 Tohoku-oki tsunami caused severe damage to the coastal regions of eastern Japan and left a sediment veneer over affected areas. We discuss differences in depositional characteristics of the 2011 Tohoku-oki tsunami from the viewpoint of the sediment source, coastal topography and flow height. The study area on the Misawa coast, northern Tohoku, includes a 20 km long coastline with sandy beaches, coastal dunes and a gently sloping lowland. This landscape assemblage provides an opportunity to examine the effects of topography on the characteristics of the tsunami deposit. During field surveys conducted from April 10 to May 2, 2011, we described the thickness, facies, and structure of the tsunami deposit. We also collected sand samples at approximately 20 m intervals along 13 shore-perpendicular transects extending up to 550 m inland, for grain size and mineral assemblage analysis. The tsunami flow height was estimated by measuring the elevation of debris found in trees, broken tree limbs, or water marks on buildings. The nature of the coastal lowland affected the flow height and inundation distance. In the southern part of the study area, where there is a narrow, 100 m wide low-lying coastal strip, the run-up height reached 10 m on the landward terrace slopes. To the north, the maximum inundation reached 550 m with a run-up height of 3.2 m on the wider, low-lying coastal topography. The average flow height was 4-5 m. The tsunami eroded coastal dunes and formed small scarps along the coast. Immediately landward of the coastal dunes the tsunami deposit was more than 20 cm thick, but thinned markedly inland from this point. Close to the dunes the deposit was composed largely of medium sand (1-2 Φ) with planar and parallel bedding, but with no apparent upward fining or coarsening. The grain size was similar to that of the coastal dune and we infer that the dunes were the local source material for the tsunami deposit at this point. The mineral assemblage of the

  13. Earth Observation in Environmental and Societal Impacts of Mineral Resources Exploitation

    NASA Astrophysics Data System (ADS)

    Chevrel, Stephane

    Several national and international initiatives, both from the private or the institutional sectors, arised to address the sustainable development of the extractive industry and the reduction of its environmental footprint. Meanwhile, the extractive industry is facing increasing environmental and societal pressures, being regulatory or not, during all phases of a project, from exploration to exploitation and closure. The social acceptability of a project is among the major key issues to be dealt with. The EO-MINERS project (Earth Observation for Monitoring and Observing Environmental and Societal Impacts of Mineral Resources Exploration and Exploitation) is a newly EU funded Research and Technological Development project started in February 2010. EO-MINERS scientific and technical objectives are to: i) assess policy requirements at macro (public) and micro (mining companies) levels and define environmental, socio-economic, societal and sustainable development criteria and indicators to be possibly dealt using EO (Earth Observation); ii) use existing EO knowledge and carry out new developments on demonstration sites to further demonstrate the capabilities of integrated EO-based methods and tools in monitoring, managing and contributing reducing the environmental and societal footprints of the extractive industry during all phases of a mining project, from the exploration to the exploitation and closure stages; iii) contribute making reliable and objective information about affected ecosystems, populations and societies, to serve as a basis for a sound "trialogue" between industrialists, governmental organisations and stakeholders. EO-MINERS also is designed to embed the outcomes of the project firmly in the GEO process through a review the existing GEO Tasks covering the 9 societal benefit and 5 transverse areas defined by GEO work plan 2007-2009. This analysis will be used to identify synergies and gaps between EO-MINERS and GEO, with the aim of mapping mining and

  14. Secondary Sulfate Mineralization and Basaltic Chemistry of Craters of the Moon National Monument, Idaho: Potential Martian Analog

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    C. Doc Richardson; Nancy W. Hinman; Lindsay J. McHenry

    2012-05-01

    Secondary deposits associated with the basaltic caves of Craters of the Moon National Monument (COM) in southern Idaho were examined using X-ray powder diffraction, X-ray fluorescence spectrometry, Fourier transform infrared spectrometry, and Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). The secondary mineral assemblages are dominated by Na-sulfate minerals (thenardite, mirabilite) with a small fraction of the deposits containing minor concentrations of Na-carbonate minerals. The assemblages are found as white, efflorescent deposits in small cavities along the cave walls and ceilings and as localized mounds on the cave floors. Formation of the deposits is likely due to direct and indirectmore » physiochemical leaching of meteoritic water through the overlying basalts. Whole rock data from the overlying basaltic flows are characterized by their extremely high iron concentrations, making them good analogs for martian basalts. Understanding the physiochemical pathways leading to secondary mineralization at COM is also important because lava tubes and basaltic caves are present on Mars. The ability of FTICR-MS to consistently and accurately identify mineral species within these heterogeneous mineral assemblages proves its validity as a valuable technique for the direct fingerprinting of mineral species by deductive reasoning or by comparison with reference spectra.« less

  15. Geochemical and textural characterization of phosphate accessory phases in the vein assemblage and metasomatically altered Llallagua tin porphyry

    NASA Astrophysics Data System (ADS)

    Betkowski, Wladyslaw B.; Rakovan, John; Harlov, Daniel E.

    2017-09-01

    Petrographic and geochemical characterization of phosphate accessory minerals represents a powerful tool in understanding the mineralization and metasomatic history of one of the world's biggest tin deposits, the Siglo XX mine, Salvadora stock, Llallagua, Bolivia. The Llallagua tin deposit lies in a hydrothermally altered porphyry stock that is part of the subduction-related Bolivian tin belt. Despite numerous studies, there is still a debate over the timing and characteristics of mineralization history of the deposit. Primary igneous fluorapatite and monazite (for the first time) were recognized in the altered porphyry. The igneous monazite is enriched in Th, unlike the hydrothermal monazite that is recognized for its low Th concentration. Fluorapatite, monazite, and xenotime also coexist with cassiterite within the hydrothermal vein assemblage. Fluorapatite and xenotime are essentially pristine. Monazite, however, shows various degrees of alteration in the form of regenerative mineral replacement (RMR). This exemplifies differential reactivity and selective mineral replacement/alteration of three accessory phosphate minerals, that are all important geochemical tracers of magmatic and hydrothermal processes, and which can all be used as geochronometers. Mineral textures and composition in the altered porphyry and vein assemblages have been evaluated. Monazite-xenotime geothermometry indicates monazite crystallization beginning around 550 °C. Monazite continues to grow as temperatures gradually decrease to about 300 °C, when most of cassiterite precipitation occurred in the samples studied. The primary mechanism of phosphate alteration has been identified as a coupled dissolution-reprecipitation process, which led to REE exchange in the igneous fluorapatite and hydrothermal monazite. In Type I local alteration, La and Pr-Nd show continuity across the pre- and post- alteration concentric zones indicating that they were not affected by alteration. This is an

  16. The influence of minerals on decomposition of the n-alkyl-α-amino acid norvaline under hydrothermal conditions

    NASA Astrophysics Data System (ADS)

    McCollom, Thomas M.

    2013-03-01

    Laboratory experiments were conducted to observe the effect of iron oxide and sulfide minerals on decomposition reactions of norvaline, a representative of a group of alkyl-α-amino acids observed in meteorites and prebiotic synthesis experiments. The primary products observed during heating of aqueous solutions of norvaline at temperatures of 156-186 °C in the presence of minerals included CO2, NH3, butyric acid, and valeric acid. The products indicated that norvaline predominantly decomposed by a combination of pathways that included both decarboxylation followed rapidly by oxidative deamination (norvaline → butanamide + CO2 → butyric acid + NH3) and deamination directly to valeric acid (norvaline → valeric acid + NH3). An experiment performed with alanine under similar conditions showed it decomposed by analogous reactions that produced acetic and propionic acids along with CO2 and NH3. For both amino acids, the presence of minerals accelerated decomposition rates as well as altered the final products of reaction, when compared with decomposition in the absence of mineral substrates. In addition, decomposition of norvaline was found to proceed much faster in the presence of the mineral assemblage hematite-magnetite-pyrite (HMP) than with the assemblage pyrite-pyrrhotite-magnetite (PPM), a trend that has been observed for several other organic compounds. The influence of minerals on decomposition reactions of these amino acids appears to be attributable to a combination of surface catalysis and production of dissolved sulfur compounds. Overall, the results indicate that minerals may exert a substantial influence on amino acid stability in many geologic environments, and emphasize the need to consider the impact of minerals when evaluating the lifetimes and decomposition rates of amino acids in terrestrial and planetary systems. Estimated half-lives for alkyl-α-amino acids based on the experimental results indicate that moderately hot hydrothermal

  17. Utility of high-altitude infrared spectral data in mineral exploration: Application to Northern Patagonia Mountains, Arizona

    USGS Publications Warehouse

    Berger, B.R.; King, T.V.V.; Morath, L.C.; Phillips, J.D.

    2003-01-01

    Synoptic views of hydrothermal alteration assemblages are of considerable utility in regional-scale minerals exploration. Recent advances in data acquisition and analysis technologies have greatly enhanced the usefulness of remotely sensed imaging spectroscopy for reliable alteration mineral assemblages mapping. Using NASA's Airborne Visible Infrared Imaging Spectrometer (AVIRIS) sensor, this study mapped large areas of advanced argillic and phyllic-argillic alteration assemblages in the southeastern Santa Rita and northern Patagonia mountains, Arizona. Two concealed porphyry copper deposits have been identified during past exploration, the Red Mountain and Sunnyside deposits, and related published hydrothermal alteration zoning studies allow the comparison of the results obtained from AVIRIS data to the more traditional field mapping approaches. The AVIRIS mapping compares favorably with field-based studies. An analysis of iron-bearing oxide minerals above a concealed supergene chalcocite deposit at Red Mountain also indicates that remotely sensed data can be of value in the interpretation of leached caps above porphyry copper deposits. In conjunction with other types of geophysical data, AVIRIS mineral maps can be used to discriminate different exploration targets within a region.

  18. Hydrothermal alteration of a chevkinite-group mineral to a bastnäsite-(Ce)-ilmenite- columbite-(Fe) assemblage: interaction with a F-, CO2-rich fluid

    NASA Astrophysics Data System (ADS)

    Macdonald, Ray; Bagiński, Bogusław; Kartashov, Pavel M.; Zozulya, Dmitry; Dzierżanowski, Piotr; Jokubauskas, Petras

    2015-12-01

    The results are presented of a textural and mineral chemical study of a previously undescribed type of hydrothermal alteration of chevkinite-(Ce) which occurs in a syenitic pegmatite from the Vishnevye Mountains, Urals Region, Russia. The progressive alteration of the chevkinite to a bastnäsite-(Ce)-ilmenite-columbite-(Fe) assemblage through a series of texturally complex intermediate stages is described and electron microprobe analyses are given of all the major phases. Unusual Nb ± Th-rich phases formed late in the alteration sequence provide evidence of local Nb mobility. The main compositional fluxes are traced, especially of the REE, HFSE, Th and U. It appears that almost all elements, with the exception of La, released from the chevkinite-(Ce) were reincorporated into later phases, such that they did not leave the alteration crust in significant amounts. The hydrothermal fluids are inferred to have been F- and CO2-rich, with variable levels of Ca activity, and with fO2 mainly between the nickel-nickel oxide and magnetite-hematite buffers. This occurrence represents a new paragenesis for a columbite-group mineral.

  19. No correlation between the diversity and productivity of assemblages: evidence from the phytophage and predator assemblages in various cotton agroecosystems.

    PubMed

    Gao, Feng; Men, XingYuan; Ge, Feng

    2014-09-01

    Biodiversity research has shown that primary productivity increases with plant species number, especially in many experimental grassland systems. Here, we assessed the correlation between productivity and diversity of phytophages and natural enemy assemblages associated with planting date and intercropping in four cotton agroecosystems. Twenty-one pairs of data were used to determine Pearson correlations between species richness, total number of individuals, diversity indices and productivity for each assemblage every five days from 5 June to 15 September 2012. At the same trophic level, the productivity exhibited a significant positive correlation with species richness of the phytophage or predator assemblage. A significant correlation was found between productivity and total number of individuals in most cotton fields. However, no significant correlations were observed between productivity and diversity indices (including indices of energy flow diversity and numerical diversity) in most cotton fields for either the phytophage or the predator assemblages. Species richness of phytophage assemblage and total individual numbers were significantly correlated with primary productivity. Also, species richness of natural enemy assemblage and total number of individuals correlated with phytophage assemblage productivity. A negative but not significant correlation occurred between the indices of numerical diversity and energy flow diversity and lower trophic-level productivity in the cotton-phytophage and phytophage-predator assemblages for most intercropped cotton agroecosystems. Our results clearly showed that there were no correlations between diversity indices and productivity within the same or lower trophic levels within the phytophage and predator assemblages in cotton agroecosystems, and inter-cropped cotton fields had a stronger ability to support the natural enemy assemblage and potentially to reduce phytophages.

  20. Spatial and temporal zoning of hydrothermal alteration and mineralization in the Sossego iron oxide-copper-gold deposit, Carajás Mineral Province, Brazil: Paragenesis and stable isotope constraints

    USGS Publications Warehouse

    Monteiro, Lena V.S.; Xavier, R.P.; Carvalho, E.R.; Hitzman, M.W.; Johnson, C.A.; Souza, Filho C.R.; Torresi, I.

    2008-01-01

    The Sossego iron oxide–copper–gold deposit (245 Mt @ 1.1% Cu, 0.28 g/t Au) in the Carajás Mineral Province of Brazil consists of two major groups of orebodies (Pista–Sequeirinho–Baiano and Sossego–Curral) with distinct alteration assemblages that are separated from each other by a major high angle fault. The deposit is located along a regional WNW–ESE-striking shear zone that defines the contact between metavolcano–sedimentary units of the ∼2.76 Ga Itacaiúnas Supergroup and tonalitic to trondhjemitic gneisses and migmatites of the ∼2.8 Ga Xingu Complex. The deposit is hosted by granite, granophyric granite, gabbro, and felsic metavolcanic rocks. The Pista–Sequeirinho–Baiano orebodies have undergone regional sodic (albite–hematite) alteration and later sodic–calcic (actinolite-rich) alteration associated with the formation of massive magnetite–(apatite) bodies. Both these alteration assemblages display ductile to ductile–brittle fabrics. They are cut by spatially restricted zones of potassic (biotite and potassium feldspar) alteration that grades outward to chlorite-rich assemblages. The Sossego–Curral orebodies contain weakly developed early albitic alteration and very poorly developed subsequent calcic–sodic alteration. These orebodies contain well-developed potassic alteration assemblages that were formed during brittle deformation that resulted in the formation of breccia bodies. Breccia matrix commonly displays coarse mineral infill suggestive of growth into open space. Sulfides in both groups of deposits were precipitated first with potassic alteration and more importantly with a later assemblage of calcite–quartz–epidote–chlorite. In the Sequeirinho orebodies, sulfides range from undeformed to deformed; sulfides in the Sossego–Curral orebodies are undeformed. Very late, weakly mineralized hydrolytic alteration is present in the Sossego/Currral orebodies. The sulfide assemblage is dominated by chalcopyrite with

  1. Characterization of potential mineralization in Afghanistan: four permissive areas identified using imaging spectroscopy data

    USGS Publications Warehouse

    King, Trude V.V.; Berger, Byron R.; Johnson, Michaela R.

    2014-01-01

    As part of the U.S. Geological Survey and Department of Defense Task Force for Business and Stability Operations natural resources revitalization activities in Afghanistan, four permissive areas for mineralization, Bamyan 1, Farah 1, Ghazni 1, and Ghazni 2, have been identified using imaging spectroscopy data. To support economic development, the areas of potential mineralization were selected on the occurrence of selected mineral assemblages mapped using the HyMap™ data (kaolinite, jarosite, hydrated silica, chlorite, epidote, iron-bearing carbonate, buddingtonite, dickite, and alunite) that may be indicative of past mineralization processes in areas with limited or no previous mineral resource studies. Approximately 30 sites were initially determined to be candidates for areas of potential mineralization. Additional criteria and material used to refine the selection and prioritization process included existing geologic maps, Landsat Thematic Mapper data, and published literature. The HyMapTM data were interpreted in the context of the regional geologic and tectonic setting and used the presence of alteration mineral assemblages to identify areas with the potential for undiscovered mineral resources. Further field-sampling, mapping, and supporting geochemical analyses are necessary to fully substantiate and verify the specific deposit types in the four areas of potential mineralization.

  2. Factors influencing the composition of detrital heavy mineral suites in Holocene sands of the Apure River drainage basin, Venezuela

    USGS Publications Warehouse

    Morton, Andrew C.

    1993-01-01

    Heavy mineral assemblages in rivers in the Apure River drainage basin of Venezuela and Colombia closely reflect the nature of the source regions, which lie in the Andean orogenic terranes to the west and northwest. The Caribbean Mountains, largely composed of greenschist-facies pelites, phyllites, carbonates, and metavolcanics, supply assemblages dominated by epidote and calcic amphibole. Minor amounts of the high-pressure index minerals glaucophane and lawsonite indicate the presence of blueschistfacies rocks, reflecting the origin of the Caribbean Mountains by subduction-related tectonism. The northern Mérida Andes, which comprise basement gneisses and granites overlain by unmetamorphosed to low-grade metamorphosed clastics, supply two types of assemblage reflecting these two lithological types: garnet-sillimanite-staurolite-amphibole suites from the basement rocks, and epidote-amphibole suites from the overlying cover sequence. The southern Mérida Andes supply stable heavy mineral suites reflecting recycling from the extensive unmetamorphosed sandstones that occur at outcrop. By considering suites from different physiographical provinces, the effects of short-term alluvial storage in the Llanos on heavy mineral assemblages have been evaluated. Weathering during alluvial storage appears to be effective in modifying the apatite-tourmaline ratio, which shows a steady, marked decline with distance from the mountain front, resulting from the removal of apatite during weathering. Clinopyroxene and garnet may also show evidence of loss through weathering, although the trends are poorly constrained statistically. Epidote and amphibole proportions remain essentially constant, possibly through a balance between loss through weathering and continual resupply from the breakdown of rock fragments. In general, the heavy mineral assemblages are less affected than the bulk mineralogy by alluvial storage on the Llanos.

  3. Origin and prospectivity of heavy mineral enriched sand deposits along the Somaliland coastal areas

    NASA Astrophysics Data System (ADS)

    Ali, M. Y.; Hibberd, P.; Stoikovich, B.

    2018-04-01

    Sixty-one heavy mineral enriched samples along the Somaliland coast from Eil Sheikh to Ras Khatib, a distance of about 130 km, were analyzed using X-ray Fluorescence, X-ray Diffraction and SEM-EDS techniques. This study reveals that a considerable amount of heavy minerals is present along the Somaliland coast and confirms the presence of high concentration titanium and iron bearing minerals. However, the backshore deposits in the mouths of Waaheen and Biyo Gure ephemeral rivers as well as raised paleo-beaches in the east of port city of Berbera demonstrate the highest level of titaniferous heavy minerals with most samples showing concentration greater than 50 wt %. The titanium detected in geochemical analysis occurs in the form of ilmenite, rutile, titanite and titaniferous magnetite. Also, present in minor or trace amounts, are garnet, zircon and monazite. Heavy mineral accumulations in the east and west of Berbera have different mineralogical assemblages. The east of Berbera is dominated by quartz with moderate concentration of plagioclase, K-feldspar, magnetite, hematite and titanium bearing minerals, whereas in the west of Berbera, the dominant minerals are quartz, K-feldspar and plagioclase with variable proportions of ilmenite, rutile, mica, amphibole and pyroxene. These variations in mineral assemblages suggest different composition of the catchment areas that supply sediment to these deposits. The catchment area in the east of Berbera consists mainly of Proterozoic crystalline basement of the Qabri Bahar complex, Gabbro-Synenite belt and granitic intrusions that outcrop in Hudiso, Tulo Dibijo and surrounding areas. The primary sources of heavy minerals in the west of Berbera comprise of high-grade metamorphic rocks of the Mora and Qabri Bahar complexes as well as the Miocene volcanics that outcrop in Laferug and Hagabo areas. The heavy mineral sand deposits observed along the Somaliland coast have the potential to provide commercially important heavy

  4. The Private Lives of Minerals: Social Network Analysis Applied to Mineralogy and Petrology

    NASA Astrophysics Data System (ADS)

    Hazen, R. M.; Morrison, S. M.; Fox, P. A.; Golden, J. J.; Downs, R. T.; Eleish, A.; Prabhu, A.; Li, C.; Liu, C.

    2016-12-01

    Comprehensive databases of mineral species (rruff.info/ima) and their geographic localities and co-existing mineral assemblages (mindat.org) reveal patterns of mineral association and distribution that mimic social networks, as commonly applied to such varied topics as social media interactions, the spread of disease, terrorism networks, and research collaborations. Applying social network analysis (SNA) to common assemblages of rock-forming igneous and regional metamorphic mineral species, we find patterns of cohesion, segregation, density, and cliques that are similar to those of human social networks. These patterns highlight classic trends in lithologic evolution and are illustrated with sociograms, in which mineral species are the "nodes" and co-existing species form "links." Filters based on chemistry, age, structural group, and other parameters highlight visually both familiar and new aspects of mineralogy and petrology. We quantify sociograms with SNA metrics, including connectivity (based on the frequency of co-occurrence of mineral pairs), homophily (the extent to which co-existing mineral species share compositional and other characteristics), network closure (based on the degree of network interconnectivity), and segmentation (as revealed by isolated "cliques" of mineral species). Exploitation of large and growing mineral data resources with SNA offers promising avenues for discovering previously hidden trends in mineral diversity-distribution systematics, as well as providing new pedagogical approaches to teaching mineralogy and petrology.

  5. Observation of nitrate coatings on atmospheric mineral dust particles

    NASA Astrophysics Data System (ADS)

    Li, W. J.; Shao, L. Y.

    2009-03-01

    Nitrate compounds have received much attention because of their ability to alter the hygroscopic properties and cloud condensation nuclei (CCN) activity of mineral dust particles in the atmosphere. However, very little is known about specific characteristics of ambient nitrate-coated mineral particles on an individual particle scale. In this study, sample collection was conducted during brown haze and dust episodes between 24 May and 21 June 2007 in Beijing, northern China. Sizes, morphologies, and compositions of 332 mineral dust particles together with their coatings were analyzed using transmission electron microscopy (TEM) coupled with energy-dispersive X-ray (EDX) microanalyses. Structures of some mineral particles were verified using selected-area electron diffraction (SAED). TEM observation indicates that approximately 90% of the collected mineral particles are covered by visible coatings in haze samples whereas only 5% are coated in the dust sample. 92% of the analyzed mineral particles are covered with Ca-, Mg-, and Na-rich coatings, and 8% are associated with K- and S-rich coatings. The majority of coatings contain Ca, Mg, O, and N with minor amounts of S and Cl, suggesting that they are possibly nitrates mixed with small amounts of sulfates and chlorides. These nitrate coatings are strongly correlated with the presence of alkaline mineral components (e.g., calcite and dolomite). CaSO4 particles with diameters from 10 to 500 nm were also detected in the coatings including Ca(NO3)2 and Mg(NO3)2. Our results indicate that mineral particles in brown haze episodes were involved in atmospheric heterogeneous reactions with two or more acidic gases (e.g., SO2, NO2, HCl, and HNO3). Mineral particles that acquire hygroscopic nitrate coatings tend to be more spherical and larger, enhancing their light scattering and CCN activity, both of which have cooling effects on the climate.

  6. Effects of two lubricant oils on marine nematode assemblages in a laboratory microcosm experiment.

    PubMed

    Beyrem, H; Louati, H; Essid, N; Aïssa, P; Mahmoudi, E

    2010-05-01

    The effects of two lubricating oils on nematode assemblages of a Tunisian lagoon were investigated in a microcosm experiment. Sediment from a pristine site in Ghar El Melh lagoon (Western Mediterranean) was treated with either mineral oil (Mobil 20 W-50), a synthetic lubricant (Mobil 0 W-40), the same two lubricants after use in a vehicle, and effects were examined after 5 weeks. Univariate analysis showed significant differences between most univariate indices of the nematode assemblages in all the lubricant treatments as compared to the control. Total nematode abundance (I), species richness (d) and number of species (S) decreased significantly in all lubricant contaminated microcosms. However, evenness was not affected in all treated replicates except in used mineral lubricant treatment where it was significantly higher than in the control. Diversity (H') was only altered in synthetic lubricant treatments. Results from multivariate analyses of the species abundance data demonstrated that responses of nematode species to the two lubricants treatments were varied: Daptonema trabeculosum was eliminated in all lubricant treatments and seemed to be an intolerant species to oil contamination. Spirinia gerlachi increased in mineral lubricant treatments ("clean" and used) but was eliminated in all synthetic lubricant treatments. This species could be categorized as "resistant" to mineral oil contamination and intolerant to synthetic lubricant contamination. Terschellingia longicaudata increased only in synthetic lubricant treatments ("clean" and used) and appeared to be a "synthetic oil-resistant" species. Copyright 2009 Elsevier Ltd. All rights reserved.

  7. Geothermobarometry for ultramafic assemblages from the Emeishan Large Igneous Province, Southwest China and the Nikos and Zulu Kimberlites, Nunavut, Canada

    NASA Astrophysics Data System (ADS)

    Zhao, D.

    2009-05-01

    To understand and contrast the origins of ultramafic assemblages from basaltic and kimberlitic rocks and their associated deposits, such as V-Ti magnetite and Ni-Cu-(PGE) sulfide deposits and diamond, applicable thermobarometers were evaluated and applied to the ultramafic assemblages from the Emeishan Large Igneous Province (ELIP), Southwest China and from the Nikos and Zulu Kimberlites of Nunavut, Canada. The ELIP is located in the Yangtze Block, Southwest China and composed of Permian Emeishan Flood basalt (EFB) and associated layered mafic-ultramafic intrusions. Some of these intrusions host V-Ti magnetite deposits; while others contain Ni-Cu-(PGE) sulfide deposits. It is not clear why some intrusions host magnetite deposits and others contain sulfide deposits. The P-T conditions for the ultramafic assemblages from the mafic-ultramafic intrusions in the ELIP were calculated in order to understand the origins and the associated mineral deposits. The ultramafic assemblages are peridotite, olivine pyroxenite, pyroxenite in the layered intrusions and the common minerals include spinel, olivine, clinopyroxene, orthopyroxene, and minor magnetite and ilmenite. Using a two pyroxene thermometer and a Ca-Mg exchange barometer between olivine and clinopyroxene, a spinel-olivine-clinopyroxene-orthopyroxene assemblage from the Xinjie intrusion yields a T-P of 905°C and 17 kbar; and a similar assemblage from the Jinbaoshan intrusion yields a T-P of 1124°C and 31 kbar. The Nikos kimberlite, near Elwin Bay on Somerset Island, is located at the northeast end of the northeast-southwest kimberlite zone; and the Zulu kimberlite is located on the neighboring Brodeur Peninsula of Baffin Island, Nunavut. The ultramafic assemblages from the Canadian Kimberlites include garnet lherzolite, garnet-spinel lherzolite, spinel lherzolite, dunite, garnet websterite, spinel websterite and garnet clinopyroxenite. The calculated P-T conditions are in the range of 760 to 1180°C and 25 to 60

  8. Soil ecosystem function under native and exotic plant assemblages as alternative states of successional grasslands

    NASA Astrophysics Data System (ADS)

    Spirito, Florencia; Yahdjian, Laura; Tognetti, Pedro M.; Chaneton, Enrique J.

    2014-01-01

    Old fields often become dominated by exotic plants establishing persistent community states. Ecosystem functioning may differ widely between such novel communities and the native-dominated counterparts. We evaluated soil ecosystem attributes in native and exotic (synthetic) grass assemblages established on a newly abandoned field, and in remnants of native grassland in the Inland Pampa, Argentina. We asked whether exotic species alter soil functioning through the quality of the litter they shed or by changing the decomposition environment. Litter decomposition of the exotic dominant Festuca arundinacea in exotic assemblages was faster than that of the native dominant Paspalum quadrifarium in native assemblages and remnant grasslands. Decomposition of a standard litter (Triticum aestivum) was also faster in exotic assemblages than in native assemblages and remnant grasslands. In a common garden, F. arundinacea showed higher decay rates than P. quadrifarium, which reflected the higher N content and lower C:N of the exotic grass litter. Soil respiration rates were higher in the exotic than in the native assemblages and remnant grasslands. Yet there were no significant differences in soil N availability or net N mineralization between exotic and native assemblages. Our results suggest that exotic grass dominance affected ecosystem function by producing a more decomposable leaf litter and by increasing soil decomposer activity. These changes might contribute to the extended dominance of fast-growing exotic grasses during old-field succession. Further, increased organic matter turnover under novel, exotic communities could reduce the carbon storage capacity of the system in the long term.

  9. Iron Oxidation Processes During Asteroidal Fluid-Rock Interactions: a Nanoscale Study of Serpentine-bearing Alteration Assemblages in the Murray Meteorite

    NASA Astrophysics Data System (ADS)

    Elmaleh, A.; Bourdelle, F.; Benzerara, K.; Caste, F.; Leroux, H.; Devouard, B.

    2014-12-01

    Carbonaceous chondrites of the CM and CI groups contain large amounts of water bound in minerals, attesting to early water-rock interactions on their parent bodies. In CM2 chondrites such as the Murray meteorite the alteration assemblages mostly consist of serpentines with variable chemical compositions. Even though chondritic serpentines formed from anoxic fluids, they contain significant amounts of ferric iron. In order to evaluate mass transfers and redox processes during alteration, we performed a study of a heavily altered calcium-aluminium-rich inclusion (CAI), at the nanometer scale (Transmission Electron Microscopy and Soft x-Ray Scanning Transmission Spectro-Microscopy, on ultra-thin sections prepared by Focused Ion Beam - FIB - milling). Using x-ray absorption spectroscopy at the Fe L2,3-edges, and based on literature references and on measurements of crystallographically oriented FIB foils of cronstedtite (the mixed-valence Fe endmember of serpentine) we estimated over 50% Fe3+ in alteration assemblages. We measured higher ferric iron proportions in mixed Fe,Mg,Al-serpentine/hydroxide disordered phases than in well-crystallized Al,Mg-bearing cronstedtite. We suggest that aqueous Fe2+ was transported to the initially Fe-depleted CAI. There, local changes in pH conditions and / or mineral catalysis would have promoted the partial oxidation of Fe. Later input of Al- and Mg-rich solutions might then have destabilized the initial serpentine, yielding assemblages un-equilibrated from the structural, chemical and redox point of views, similar to the polysomatic assemblages observed in terrestrial hydrothermal systems. Here, we illustrate the usefulness of such a combined study for better understanding the processes of hydration on the parent body of carbonaceous chondrites. Interestingly, as the reactions proposed for the oxidation of Fe generate hydrogen, reduction reactions - involving carbon species, for instance - are expected to follow the ones described

  10. Mars weathering analogs - Secondary mineralization in Antarctic basalts

    NASA Technical Reports Server (NTRS)

    Berkley, J. L.

    1982-01-01

    Alkalic basalt samples from Ross Island, Antarctica, are evaluated as terrestrial analogs to weathered surface materials on Mars. Secondary alteration in the rocks is limited to pneumatolytic oxidation of igneous minerals and glass, rare groundmass clay and zeolite mineralization, and hydrothermal minerals coating fractures and vesicle surfaces. Hydrothermal mineral assemblages consist mainly of K-feldspar, zeolites (phillipsite and chabazite), calcite, and anhydrite. Low alteration rates are attributed to cold and dry environmental factors common to both Antarctica and Mars. It is noted that mechanical weathering (aeolian abrasion) of Martian equivalents to present Antarctic basalts would yield minor hydrothermal minerals and local surface fines composed of primary igneous minerals and glass but would produce few hydrous products, such as palagonite, clay or micas. It is thought that leaching of hydrothermal vein minerals by migrating fluids and redeposition in duricrust deposits may represent an alternate process for incorporating secondary minerals of volcanic origin into Martian surface fines.

  11. Ground Truthing Orbital Clay Mineral Observations with the APXS Onboard Mars Exploration Rover Opportunity

    NASA Technical Reports Server (NTRS)

    Schroeder, C.; Gellert, R.; VanBommel, S.; Clark, B. C.; Ming, D. W.; Mittlefehldt, D. S.; Yen, A. S.

    2016-01-01

    NASA's Mars Exploration Rover Opportunity has been exploring approximately 22 km diameter Endeavour crater since 2011. Its rim segments predate the Hesperian-age Burns formation and expose Noachian-age material, which is associated with orbital Fe3+-Mg-rich clay mineral observations [1,2]. Moving to an orders of magnitude smaller instrumental field of view on the ground, the clay minerals were challenging to pinpoint on the basis of geochemical data because they appear to be the result of near-isochemical weathering of the local bedrock [3,4]. However, the APXS revealed a more complex mineral story as fracture fills and so-called red zones appear to contain more Al-rich clay minerals [5,6], which had not been observed from orbit. These observations are important to constrain clay mineral formation processes. More detail will be added as Opportunity is heading into her 10th extended mission, during which she will investigate Noachian bedrock that predates Endeavour crater, study sedimentary rocks inside Endeavour crater, and explore a fluid-carved gully. ESA's ExoMars rover will land on Noachian-age Oxia Planum where abundant Fe3+-Mg-rich clay minerals have been observed from orbit, but the story will undoubtedly become more complex once seen from the ground.

  12. Magnetic minerals in soils across the forest-prairie ecotone in NW Minnesota

    NASA Astrophysics Data System (ADS)

    Maxbauer, D.; Feinberg, J. M.; Fox, D. L.; Nater, E. A.

    2016-12-01

    Soil pedogenesis results in a complex assemblage of iron oxide minerals that can be disentangled successfully using sensitive magnetic techniques to better delineate specific soil processes. Here, we evaluate the variability in soil processes within forest, prairie, and transitional soils along an 11 km transect of anthropogenically unaltered soils that span the forest-to-prairie ecotone in NW Minnesota. All soils in this study developed on relatively uniform topography, similar glacial till parent material, under a uniform climate, and presumably over similar time intervals. The forest-to-prairie transition zone in this region is controlled by naturally occurring fires, affording the opportunity to evaluate differences in soil processes related to vegetation (forest versus prairie) and burning (prairie and transitional soils). Results suggest that the pedeogenic fraction of magnetite/maghemite in soils is similar in all specimens and is independent of soil type, vegetation, and any effects of burning. Magnetically enhanced horizons have 45% of remanence held by a low-coercivity pedogenic component (likely magnetite/maghemite) regardless of vegetation cover and soil type. Enhancement ratios for magnetic susceptibility and low-field remanences, often used as indicators of pedogenic magnetic minerals, are more variable but remain statistically equivalent across the transect. These results support the hypothesis that pedogenic magnetic minerals in soils mostly reflect ambient climatic conditions regardless of the variability in soil processes related to vegetation and soil type. The non-pedogenic magnetic mineral assemblage shows clear distinctions between the forest, prairie, and transitional soils in hysteresis properties (remanence and coercivity ratios; Mr/Ms and Bc/Bcr, respectively), suggesting that variable processes in these settings influence the local magnetic mineral assemblage, and that it may be possible to use magnetic minerals in paleosols to constrain

  13. Mineralogy, mineral chemistry, and paragenesis of gold, silver, and base-metal ores of the North Amethyst vein system, San Juan Mountains, Mineral County, Colorado

    USGS Publications Warehouse

    Foley, Nora K.; Caddey, Stanton W.; Byington, Craig B.; Vardiman, David M.

    1993-01-01

    Mineralogic, lead-isotopic, and fluid-inclusion characteristics of the younger association are similar to those of ores of the southern and central parts of the Creede mining district. In contrast, the gold and manganese-silicate assemblages of the older association are rare to absent in the southern and central parts of the district. The local and early occurrence of the manganese and gold assemblages may indicate that they formed in a small hydrothermal cell that predated the extensive hydrothermal system from which ores of the central and southern parts of the Creede district are proposed to have been deposited (Bethke, 1988). If similar early-stage cells were present in the southern and central parts of the district, they may have been replaced or overprinted by later assemblages, and they may remain to be discovered. In the latter case, mineral assemblages that formed at early stages in the paragenesis hold the most promise for gold exploration.

  14. Biological assessments of Appalachian streams based on predictive models for fish, macroinvertebrate, and diatom assemblages

    USGS Publications Warehouse

    Carlisle, D.M.; Hawkins, C.P.; Meador, M.R.; Potapova, M.; Falcone, J.

    2008-01-01

    We developed empirical models for fish, macroinvertebrate, and diatom assemblages to assess the biological condition of 268 streams sampled from 1993 to 2002 in 7 major river basins in the Appalachian region of the USA. These models estimate the expected taxonomic composition at each site based on observed variation in taxonomic composition at reference sites. The index, O/E, is the ratio of the number of predicted taxa that were observed (O) to that expected (E) to occur at a site and is a measure of taxonomic completeness. We compared how O/E for each assemblage varied among major landuse settings and whether impaired assemblages were associated with particular physicochemical conditions. We also examined concordance among assemblages in their response to stress. Biological, chemical, and physical data were collected following consistent protocols. We used land-cover criteria, published data, and topographic maps to classify sites by major landuse setting. Fish, macroinvertebrate, and diatom assemblages had been sampled at 73, 108, and 52, respectively, of the least disturbed sites used to establish reference conditions. The models accounted for a substantial portion of the natural variation in taxonomic composition across sites that was associated with biogeographic, climatic, and basin-scale factors and generally were unbiased across the range of environmental gradients observed in the region. Assessments at nonreference sites showed that impairment of fish and macroinvertebrate assemblages was most strongly associated with agriculture and urban land uses, whereas impairment of diatom assemblages was most strongly associated with mining in the basin. Concordance in assessments among assemblages was not strong. Assessments based on 2 assemblages differed in 28 to 57% of cases, and assessments were never concordant for cases where all 3 assemblages were sampled. Furthermore, only 1/2 of these cases would have been assessed as ecologically impaired had only 1

  15. Origin of secondary sulfate minerals on active andesitic stratovolcanoes

    USGS Publications Warehouse

    Zimbelman, D.R.; Rye, R.O.; Breit, G.N.

    2005-01-01

    Sulfate minerals in altered rocks on the upper flanks and summits of active andesitic stratovolcanoes result from multiple processes. The origin of these sulfates at five active volcanoes, Citlalte??petl (Mexico), and Mount Adams, Hood, Rainier, and Shasta (Cascade Range, USA), was investigated using field observations, petrography, mineralogy, chemical modeling, and stable-isotope data. The four general groups of sulfate minerals identified are: (1) alunite group, (2) jarosite group, (3) readily soluble Fe- and Al-hydroxysulfates, and (4) simple alkaline-earth sulfates such as anhydrite, gypsum, and barite. Generalized assemblages of spatially associated secondary minerals were recognized: (1) alunite+silica??pyrite??kaolinite?? gypsum??sulfur, (2) jarosite+alunite+silica; (3) jarosite+smectite+silica??pyrite, (4) Fe- and Al-hydroxysulfates+silica, and (5) simple sulfates+silica??Al-hydroxysulfates??alunite. Isotopic data verify that all sulfate and sulfide minerals and their associated alteration assemblages result largely from the introduction of sulfur-bearing magmatic gases into meteoric water in the upper levels of the volcanoes. The sulfur and oxygen isotopic data for all minerals indicate the general mixing of aqueous sulfate derived from deep (largely disproportionation of SO2 in magmatic vapor) and shallow (oxidation of pyrite or H2S) sources. The hydrogen and oxygen isotopic data of alunite indicate the mixing of magmatic and meteoric fluids. Some alunite-group minerals, along with kaolinite, formed from sulfuric acid created by the disproportionation of SO2 in a condensing magmatic vapor. Such alunite, observed only in those volcanoes whose interiors are exposed by erosion or edifice collapse, may have ??34S values that reflect equilibrium (350??50 ??C) between aqueous sulfate and H2S. Alunite with ??34S values indicating disequilibrium between parent aqueous sulfate and H2S may form from aqueous sulfate created in higher level low

  16. Temporal turnover and the maintenance of diversity in ecological assemblages

    PubMed Central

    Magurran, Anne E.; Henderson, Peter A.

    2010-01-01

    Temporal variation in species abundances occurs in all ecological communities. Here, we explore the role that this temporal turnover plays in maintaining assemblage diversity. We investigate a three-decade time series of estuarine fishes and show that the abundances of the individual species fluctuate asynchronously around their mean levels. We then use a time-series modelling approach to examine the consequences of different patterns of turnover, by asking how the correlation between the abundance of a species in a given year and its abundance in the previous year influences the structure of the overall assemblage. Classical diversity measures that ignore species identities reveal that the observed assemblage structure will persist under all but the most extreme conditions. However, metrics that track species identities indicate a narrower set of turnover scenarios under which the predicted assemblage resembles the natural one. Our study suggests that species diversity metrics are insensitive to change and that measures that track species ranks may provide better early warning that an assemblage is being perturbed. It also highlights the need to incorporate temporal turnover in investigations of assemblage structure and function. PMID:20980310

  17. Mineralogical assemblages forming at hyperalkaline warm springs hosted on ultramafic rocks: A case study of Oman and Ligurian ophiolites

    NASA Astrophysics Data System (ADS)

    Chavagnac, Valérie; Ceuleneer, Georges; Monnin, Christophe; Lansac, Benjamin; Hoareau, Guilhem; Boulart, Cédric

    2013-07-01

    We report on the mineralogical assemblages found in the hyperalkaline springs hosted on Liguria and Oman ophiolites based on exhaustive X-ray diffraction and scanning electron microprobe analyses. In Liguria, hyperalkaline springs produce a thin brownish calcite precipitate that covers the bedrock due to the concomitant atmospheric CO2 uptake and neutralization of the hyperalkaline waters. No brucite and portlandite minerals are observed. The discharge of alkaline waters in Oman ophiolite forms white-orange precipitates. Calcium carbonate minerals (calcite and/or aragonite) are the most abundant and ubiquitous precipitates and are produced by the same mechanism as in Liguria. This process is observed as a thin surface crust made of rhombohedral calcite. Morphological features of aragonite vary from needle-, bouquet-, dumbbell-, spheroidal-like habitus according to the origin of carbon, temperature, and ionic composition of the hyperalkaline springs, and the biochemical and organic compounds. Brucite is observed both at hyperalkaline springs located at the thrust plane and at the paleo-Moho. The varying mixing proportions between the surface runoff waters and the hyperalkaline ones control brucite precipitation. The layered double hydroxide minerals occur solely in the vicinity of hyperalkaline springs emerging within the bedded gabbros. Finally, the dominant mineralogical associations we found in Oman (Ca-bearing carbonates and brucite) in a serpentinizing environment driven by the meteoric waters are surprisingly the same as those observed at the Lost City hydrothermal site in a totally marine environment.

  18. Temporal and spatial distribution of alteration, mineralization and fluid inclusions in the transitional high-sulfidation epithermal-porphyry copper system at Red Mountain, Arizona

    USGS Publications Warehouse

    Lecumberri-Sanchez, Pilar; Newton, M. Claiborne; Westman, Erik C.; Kamilli, Robert J.; Canby, Vertrees M.; Bodnar, Robert J.

    2013-01-01

    Red Mountain, Arizona, is a Laramide porphyry Cu system (PCD) that has experienced only a modest level of erosion compared to most other similar deposits in the southwestern United States. As a result, the upper portion of the magmatic–hydrothermal system, which represents the transition from shallower high-sulfidation epithermal mineralization to deeper porphyry Cu mineralization, is well preserved. Within the Red Mountain system, alteration, mineralization and fluid inclusion assemblages show a systematic distribution in both time and space. Early-potassic alteration (characterized by the minerals biotite and magnetite) is paragenetically earlier than late-potassic alteration (K-feldspar–anhydrite) and both are followed by later phyllic (sericite–pyrite) alteration. Advanced argillic alteration (pyrophyllite–alunite–other clay minerals) is thought to be coeval with or postdate phyllic alteration. Minerals characteristic of advanced argillic alteration are present in the near surface. Phyllic alteration extends to greater depths compared to advanced argillic alteration. Early-potassic and late-potassic alteration are only observed in the deepest part of the system. Considerable overlap of phyllic alteration with both early-potassic and late-potassic alteration zones is observed. The hypogene mineralization contains 0.4–1.2% Cu and is spatially and temporally related to the late-potassic alteration event. Molybdenum concentration is typically In the deepest part of the system, an early generation of low-to-moderate density and salinity liquid + vapor inclusions with opaque daughter minerals is followed in time by halite-bearing inclusions that also contain opaque daughter minerals indicating that an early intermediate-density magmatic fluid evolved to a high-density, high-salinity mineralizing fluid. The increase in density and salinity of fluids with time observed in the deeper parts of the system may be the result of immiscibility (“boiling”) of

  19. Climate change effects on North American inland fish populations and assemblages

    USGS Publications Warehouse

    Lynch, Abigail J.; Myers, Bonnie; Chu, Cindy; Eby, Lisa A.; Falke, Jeffrey A.; Kovach, Ryan P.; Krabbenhoft, Trevor J.; Kwak, Thomas J.; Lyons, John; Paukert, Craig P.; Whitney, James E.

    2016-01-01

    Climate is a critical driver of many fish populations, assemblages, and aquatic communities. However, direct observational studies of climate change impacts on North American inland fishes are rare. In this synthesis, we (1) summarize climate trends that may influence North American inland fish populations and assemblages, (2) compile 31 peer-reviewed studies of documented climate change effects on North American inland fish populations and assemblages, and (3) highlight four case studies representing a variety of observed responses ranging from warmwater systems in the southwestern and southeastern United States to coldwater systems along the Pacific Coast and Canadian Shield. We conclude by identifying key data gaps and research needs to inform adaptive, ecosystem-based approaches to managing North American inland fishes and fisheries in a changing climate.

  20. Phytoplankton Assemblage Characteristics in Recurrently Fluctuating Environments

    PubMed Central

    Roelke, Daniel L.; Spatharis, Sofie

    2015-01-01

    Annual variations in biogeochemical and physical processes can lead to nutrient variability and seasonal patterns in phytoplankton productivity and assemblage structure. In many coastal systems river inflow and water exchange with the ocean varies seasonally, and alternating periods can arise where the nutrient most limiting to phytoplankton growth switches. Transitions between these alternating periods can be sudden or gradual and this depends on human activities, such as reservoir construction and interbasin water transfers. How such activities might influence phytoplankton assemblages is largely unknown. Here, we employed a multispecies, multi-nutrient model to explore how nutrient loading switching mode might affect characteristics of phytoplankton assemblages. The model is based on the Monod-relationship, predicting an instantaneous growth rate from ambient inorganic nutrient concentrations whereas the limiting nutrient at any given time was determined by Liebig’s Law of the Minimum. Our simulated phytoplankton assemblages self-organized from species rich pools over a 15-year period, and only the surviving species were considered as assemblage members. Using the model, we explored the interactive effects of complementarity level in trait trade-offs within phytoplankton assemblages and the amount of noise in the resource supply concentrations. We found that the effect of shift from a sudden resource supply transition to a gradual one, as observed in systems impacted by watershed development, was dependent on the level of complementarity. In the extremes, phytoplankton species richness and relative overyielding increased when complementarity was lowest, and phytoplankton biomass increased greatly when complementarity was highest. For low-complementarity simulations, the persistence of poorer-performing phytoplankton species of intermediate R*s led to higher richness and relative overyielding. For high-complementarity simulations, the formation of phytoplankton

  1. Land use structures fish assemblages in reservoirs of the Tennessee River

    USGS Publications Warehouse

    Miranda, Leandro E.; Bies, J. M.; Hann, D. A.

    2015-01-01

    Inputs of nutrients, sediments and detritus from catchments can promote selected components of reservoir fish assemblages, while hindering others. However, investigations linking these catchment subsidies to fish assemblages have generally focussed on one or a handful of species. Considering this paucity of community-level awareness, we sought to explore the association between land use and fish assemblage composition in reservoirs. To this end, we compared fish assemblages in reservoirs of two sub-basins of the Tennessee River representing differing intensities of agricultural development, and hypothesised that fish assemblage structure indicated by species percentage composition would differ among reservoirs in the two sub-basins. Using multivariate statistical analysis, we documented inter-basin differences in land use, reservoir productivity and fish assemblages, but no differences in reservoir morphometry or water regime. Basins were separated along a gradient of forested and non-forested catchment land cover, which was directly related to total nitrogen, total phosphorous and chlorophyll-a concentrations. Considering the extensive body of knowledge linking land use to aquatic systems, it is reasonable to postulate a hierarchical model in which productivity has direct links to terrestrial inputs, and fish assemblages have direct links to both land use and productivity. We observed a shift from an invertivore-based fish assemblage in forested catchments to a detritivore-based fish assemblage in agricultural catchments that may be a widespread pattern among reservoirs and other aquatic ecosystems.

  2. The application of microtextural and heavy mineral analysis to discriminate between storm and tsunami deposits

    USGS Publications Warehouse

    Costa, Pedro J.M.; Gelfenbaum, Guy R.; Dawson, Sue; La selle, Seanpaul; Milne, F; Cascalho, J.; Ponte Lira, C.; Andrade, C.; Freitas, M. C.; Jaffe, Bruce E.

    2017-01-01

    Recent work has applied microtextural and heavy mineral analyses to sandy storm and tsunami deposits from Portugal, Scotland, Indonesia and the USA. We looked at the interpretation of microtextural imagery (scanning electron microscopy) of quartz grains and heavy mineral compositions. We consider inundation events of different chronologies and sources (the AD 1755 Lisbon and 2004 Indian Ocean tsunamis, the Great Storm of 11 January 2005 in Scotland, and Hurricane Sandy in 2012) that affected contrasting coastal and hinterland settings with different regional oceanographic conditions. Storm and tsunami deposits were examined along with potential source sediments (alluvial, beach, dune and nearshore sediments) to determine provenance.Results suggest that tsunami deposits typically exhibit a significant spatial variation in grain sizes, microtextures and heavy minerals. Storm deposits show less variability, especially in vertical profiles. Tsunami and storm quartz grains had more percussion marks and fresh surfaces compared to potential source material. Moreover, in the studied cases, tsunami samples had fewer fresh surfaces than storm deposits.Heavy mineral assemblages are typically site-specific. The concentration of heavy minerals decreases upwards in tsunamigenic units, whereas storm sediments show cyclic concentrations of heavy minerals, reflected in the laminations observed macroscopically in the deposits.

  3. Rapid biotic homogenization of marine fish assemblages

    PubMed Central

    Magurran, Anne E.; Dornelas, Maria; Moyes, Faye; Gotelli, Nicholas J.; McGill, Brian

    2015-01-01

    The role human activities play in reshaping biodiversity is increasingly apparent in terrestrial ecosystems. However, the responses of entire marine assemblages are not well-understood, in part, because few monitoring programs incorporate both spatial and temporal replication. Here, we analyse an exceptionally comprehensive 29-year time series of North Atlantic groundfish assemblages monitored over 5° latitude to the west of Scotland. These fish assemblages show no systematic change in species richness through time, but steady change in species composition, leading to an increase in spatial homogenization: the species identity of colder northern localities increasingly resembles that of warmer southern localities. This biotic homogenization mirrors the spatial pattern of unevenly rising ocean temperatures over the same time period suggesting that climate change is primarily responsible for the spatial homogenization we observe. In this and other ecosystems, apparent constancy in species richness may mask major changes in species composition driven by anthropogenic change. PMID:26400102

  4. Quantifying the Complete Mineral Assemblages in Rocks of GUSEV Crater, Mars

    NASA Technical Reports Server (NTRS)

    McSween, H. Y.; Ruff, S. W.; Morris, R. V.; Gellert, R.

    2007-01-01

    Determining the complete mineralogy of Mars rocks by remote sensing has remained a challenge, because of inherent limitations in the minerals that can be detected and uncertainties in spectral modeling. A subset of the igneous rocks of Gusev crater provide a unique opportunity to determine modal mineralogy, because of limited alteration and the analytical capabilities of the Athena instrument package. Here we estimate the absolute (wt. %) abundances of Fe-bearing minerals from Moessbauer spectra (previously reported only as "areas for component subspectra"), and compare these results to the normative mineralogy calculated from APXS elemental analyses. We also test our preferred mineralogy by comparison of Mini-TES spectra with synthetic thermal emission spectra.

  5. Examining shifts in Carabidae assemblages across a forest-agriculture ecotone.

    PubMed

    Leslie, T W; Biddinger, D J; Rohr, J R; Hulting, A G; Mortensen, D A; Fleischer, S J

    2014-02-01

    Northeastern U.S. farms are often situated adjacent to forestland due to the heterogeneous nature of the landscape. We investigated how forested areas influence Carabidae diversity within nearby crop fields by establishing transects of pitfall traps. Trapping extended across a forest-agriculture ecotone consisting of maize, an intermediate mowed grass margin, and a forest edge. Carabidae diversity was compared among the three habitats, and community and population dynamics were assessed along the transect. We used a principal response curve to examine and visualize community change across a spatial gradient. The highest levels of richness and evenness were observed in the forest community, and carabid assemblages shifted significantly across the ecotone, especially at the forest-grass interface. Despite strong ecotone effects, population distributions showed that some species were found in all three habitats and seemed to thrive at the ecotone. Based on similarity indices, carabid assemblages collected in maize adjacent to forest differed from carabid assemblages in maize not adjacent to forest. We conclude that forest carabid assemblages exhibit high degrees of dissimilarity with those found in agricultural fields and forested areas should thus be retained in agricultural landscapes to increase biodiversity at the landscape scale. However, ecotone species found at forest edges can still noticeably influence carabid community composition within neighboring agricultural fields. Further studies should determine how these shifts in carabid assemblages influence agroecosystem services in relation to ecosystem services observed in fields embedded in an agricultural matrix.

  6. Mineral Selection for Multicomponent Equilibrium Geothermometry

    DOE PAGES

    Plamer, C. D.; Ohly, S. R.; Smith, R. W.; ...

    2015-04-01

    Multicomponent geothermometry requires knowledge of the mineral phases in the reservoir with which the geothermal fluids may be equilibrated. These minerals phases are most often alteration products rather than primary minerals. We have reviewed the literature on geothermal systems representing most major geologic environments typically associated with geothermal activity and identified potential alteration products in various environments. We have included this information in RTEst, a code we have developed to estimate reservoir conditions (temperature, CO 2 fugacity) from the geochemistry of near-surface geothermal waters. The information has been included in RTEst through the addition of filters that decrease the potentialmore » number of minerals from all possibilities based on the basis species to those that are more relevant to the particular conditions in which the user is interested. The three groups of filters include host rock type (tholeiitic, calc-alkaline, silicic, siliciclastic, carbonate), water type (acidic, neutral), and the temperature range over which the alteration minerals were formed (low, medium, high). The user-chosen mineral assemblage is checked to make sure that it does not violate the Gibbs phase rule. The user can select one of three mineral saturation weighting schemes that decrease the chance the optimization from being skewed by reaction stoichiometry or analytical uncertainty.« less

  7. Abiotic CO2 reduction during geologic carbon sequestration facilitated by Fe(II)-bearing minerals

    NASA Astrophysics Data System (ADS)

    Nielsen, L. C.; Maher, K.; Bird, D. K.; Brown, G. E.; Thomas, B.; Johnson, N. C.; Rosenbauer, R. J.

    2012-12-01

    Redox reactions involving subsurface minerals and fluids and can lead to the abiotic generation of hydrocarbons from CO2 under certain conditions. Depleted oil reservoirs and saline aquifers targeted for geologic carbon sequestration (GCS) can contain significant quantities of minerals such as ferrous chlorite, which could facilitate the abiotic reduction of carbon dioxide to n-carboxylic acids, hydrocarbons, and amorphous carbon (C0). If such reactions occur, the injection of supercritical CO2 (scCO2) could significantly alter the oxidation state of the reservoir and cause extensive reorganization of the stable mineral assemblage via dissolution and reprecipitation reactions. Naturally occurring iron oxide minerals such as magnetite are known to catalyze CO2 reduction, resulting in the synthesis of organic compounds. Magnetite is thermodynamically stable in Fe(II) chlorite-bearing mineral assemblages typical of some reservoir formations. Thermodynamic calculations demonstrate that GCS reservoirs buffered by the chlorite-kaolinite-carbonate(siderite/magnesite)-quartz assemblage favor the reduction of CO2 to n-carboxylic acids, hydrocarbons, and C0, although the extent of abiotic CO2 reduction may be kinetically limited. To investigate the rates of abiotic CO2 reduction in the presence of magnetite, we performed batch abiotic CO2 reduction experiments using a Dickson-type rocking hydrothermal apparatus at temperatures (373 K) and pressures (100 bar) within the range of conditions relevant to GCS. Blank experiments containing CO2 and H2 were used to rule out the possibility of catalytic activity of the experimental apparatus. Reaction of brine-suspended magnetite nanoparticles with scCO2 at H2 partial pressures typical of reservoir rocks - up to 100 and 0.1 bars respectively - was used to investigate the kinetics of magnetite-catalyzed abiotic CO2 reduction. Later experiments introducing ferrous chlorite (ripidolite) were carried out to determine the potential for

  8. Chemical composition and osmium-isotope systematics of primary and secondary PGM assemblages from high-Mg chromitite of the Nurali lherzolite massif, the South Urals, Russia

    NASA Astrophysics Data System (ADS)

    Malitch, K. N.; Anikina, E. V.; Badanina, I. Yu.; Belousova, E. A.; Pushkarev, E. V.; Khiller, V. V.

    2016-01-01

    The isotopic and geochemical characteristics of PGE mineralization in high-Mg chromitite from the banded dunite-wehrlite-clinopyroxenite complex of the Nurali lherzolite massif, the South Urals, Russia is characterized for the first time. Electron microprobe analysis and LA MC-ICP-MS mass spectrometry are used for studying Cr-spinel and platinum-group minerals (PGM). Two processes synchronously develop in high-Mg chromitite subject to metamorphism: (1) the replacement of Mg-Al-rich Cr-spinel, orthopyroxene, and diopside by chromite, Cr-amphibole, chlorite, and garnet; (2) the formation of a secondary mineral assemblage consisting of finely dispersed ruthenium or Ru-hexaferrum aggregate and silicate-oxide or silicate matter on the location of primary Ru-Os-sulfides of the laurite-erlichmanite solid solution series. Similar variations of Os-isotopic composition in both primary and secondary PGM assemblages are evidence for the high stability of the Os isotope system in PGM and for the possibility of using model 187Os/188Os ages in geodynamic reconstructions.

  9. Secondary mineral growth in fractures in the Miravalles geothermal system, Costa Rica

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rochelle, C.A.; Milodowski, A.E.; Savage, D.

    1989-01-01

    A mineralogical, fluid-chemical, and theoretical study of hydrothermal alteration in veins from drillcore from the Miravalles geothermal field, Costa Rica has revealed a complex history of mineral-fluid reaction which may be used to characterize changes in temperature and fluid composition with time. Mineralogical and mineral-chemical data are consistent with hydrothermal alteration in the temperature range 200{sup 0}-270{sup 0}C, with deeper portions of the system having undergone temperatures in excess of 300{sup 0}C. Thermodynamic calculations suggest that the observed alteration assemblage is not equilibrium with current well fluids, unless estimates of reservoir pH are incorrect. Fe-Al zoning of prehnite and epidotemore » in veins is consistent with rapid, isothermal fluctuations in fluid composition at current reservoir temperatures, and may be due to changes in volatile content of the fluid due to tectonic activity.« less

  10. Reconstructing Grazer Assemblages for Protected Area Restoration

    PubMed Central

    Venter, Jan A.; Prins, Herbert H. T.; Balfour, David A.; Slotow, Rob

    2014-01-01

    Protected area management agencies often struggle to reliably reconstruct grazer assemblages due to a lack of historical distribution data for their regions. Wrong predictions of grazing assemblages could potentially affect biodiversity negatively. The objective of the study was to determine how well grazing herbivores have become established since introduction to the Mkambati Nature Reserve, South Africa, how this was influenced by facilitation and competition, and how indigenous grazer assemblages can best be predicted for effective ecological restoration. Population trends of several grazing species were investigated in in order to determine how well they have become established since introduction. Five different conceivable grazing assemblages reflecting a range of approaches that are commonly encountered during conservation planning and management decision making were assessed. Species packing was used to predict whether facilitation, competition or co-existence were more likely to occur, and the species packing of the different assemblages were assessed using ANCOVA. Reconstructing a species assemblage using biogeographic and biological information provides the opportunity for a grazer assemblage that allows for facilitatory effects, which in turn leads to an ecosystem that is able to maintain its grazer assemblage structure. The strength of this approach lies in the ability to overcome the problem of depauperate grazer assemblages, resulting from a lack of historical data, by using biogeographical and biological processes, to assist in more effectively reconstructing grazer assemblages. Adaptive management of grazer assemblage restoration through reintroduction, using this approach would further mitigate management risks. PMID:24603663

  11. Lead isotope compositions as guides to early gold mineralization: The North Amethyst vein system, Creede district, Colorado

    USGS Publications Warehouse

    Foley, Nora K.; Ayuso, Robert A.

    1994-01-01

    Pb isotope compositions from the late stage of the North Amethyst vein system and from the Bondholder and central and southern Creede mining districts are more radiogenic than the host volcanic rocks of the central cluster of the San Juan volcanic field. Our Pb isotope results indicate that early Au mineralization of the North Amethyst area may represent the product of an older and relatively local hydrothermal system distinct from that of the younger base metal and Ag mineralization found throughout the region. Fluids that deposited Au minerals may have derived their Pb isotope composition by a greater degree of interaction with shallow, relatively less radiogenic volcanic wall rocks. The younger, base metal and Ag-rich mineralization that overprints the Au mineralization in the North Amethyst area clearly has a more radiogenic isotopic signature, which implies that the later mineralization derived a greater component of its Pb from Proterozoic source rocks, or sediments derived from them.Paragenetically early sulfide-rich vein assemblages have the least radiogenic galenas and generally also have the highest Au contents. Thus, identification of paragenetically early vein assemblages with relatively unradiogenic Pb isotope compositions similar to those of the North Amethyst area provides an additional exploration tool for Au in the central San Juan Mountains area.

  12. Corrosion of heavy minerals during weathering and diagenesis: A catalog for optical analysis

    NASA Astrophysics Data System (ADS)

    Andò, Sergio; Garzanti, Eduardo; Padoan, Marta; Limonta, Mara

    2012-12-01

    A practical classification of surface textures observed on detrital grains in sands and sandstones is proposed, in order to enhance data reproducibility among operators and to implement the use of high-resolution heavy-mineral data in studies of sediment-generation, provenance, and diagenesis. Five stages of progressive weathering (unweathered, corroded, etched, deeply etched, skeletal) are recognized for diverse detrital minerals. Archetypal grains displaying increasing degrees of corrosion are illustrated in numerous color tables for visual comparison. This catalog, specifically devised to systematically collect valuable information for paleoclimatic or diagenetic interpretation during routine grain-counting under the microscope, is here shown to represent a useful subsidiary tool to reveal the different degrees of weathering for diverse minerals in modern sands of equatorial Africa, and to identify post-depositional modifications of detrital assemblages in buried orogenic sediments of the Bengal Basin. The data thus obtained need to be interpreted by carefully considering the concentration of heavy minerals in each sample, which provides the fundamental clue to quantify the degree of heavy-mineral depletion caused by either pre-depositional or post-depositional processes. The scrutiny of dissolution effects has applications in the study of the chemical properties of minerals and of diagenetic evolution, helping us to understand the development of secondary porosity and to assess the potential of water and hydrocarbon reservoirs.

  13. Magnetic Mineral diagenesis in changing water environments in the Black Sea since ˜41.6 ka

    NASA Astrophysics Data System (ADS)

    Liu, Jiabo; Nowaczyk, Norbert; Frank, Ute; Arz, Helge

    2017-04-01

    Magnetic mineral diagenesis plays a key role in the global iron cycle. To understand the authigenic magnetic mineral formation by diagenesis is also fundamentally important for the interpretation of environmental magnetic as well as paleomagnetic signals. Core MSM33-55-1, recovered from the SW Black Sea, was subjected to rock-magnetic and SEM studies. The results demonstrate that four different magnetic mineral assemblages associated to specific water conditions can be observed. Between ˜41.6 ka and ˜19 ka, magnetite and greigite are alternatively in dominance in the sediment. Due to low organic matter input during the late MIS 3 and the last glacial maximum (LGM), oxygenated bottom water in the Black Sea was favourable for preserving detrital magnetite. Greigite in this interval have irregular shapes and assemble in spots, which were formed in a micro environment with limited sulfate availability. Between ˜19 ka and ˜16.5 ka, black layers were deposited as a result of organic matter accumulation induced by productivity blooming and riverine discharge soaring after the LGM. Hence less oxygenated bottom water conditions developed, and more fine grained greigite was formed. After melt-water pulse (MWP) events (˜16.5 ka), both primary productivity and the sea level were continuously rising until ˜8.3 ka, leading to the depletion of oxygen in bottom water. In addition to greigite, pyrite was also formed and gradually in dominance as approaching the Holocene. The influx of salt water masses from the Mediterranean Sea after ˜8.3 ka contributed to the establishment of the anoxic Black Sea, which resulted in the formation of ubiquitous frambiods of pyrite. Additionally, bacterial magnetic minerals are likely present in the sediment younger than ˜8.3 ka as indicated by rock magnetic results. In this paper, four different magnetic mineral assemblages, reflecting gradual changes from an oxic to an anoix Black Sea, were identified, yielding insights into the relation

  14. Consistency of temporal and habitat-related differences among assemblages of fish in coastal lagoons

    NASA Astrophysics Data System (ADS)

    Gray, Charles A.; Rotherham, Douglas; Johnson, Daniel D.

    2011-12-01

    The consistency of habitat-related differences in coastal lagoon fish assemblages was assessed across different spatial and temporal scales. Multimesh gillnets were used to sample assemblages of fish on a monthly basis for 1-year in three habitats (shallow seagrass, shallow bare and deep substrata) at two locations (>1 km apart), in each of two coastal lagoons (approximately 500 km apart), in southeastern Australia. A total of 48 species was sampled with 34 species occurring in both lagoons and in all three habitats; species caught in only one lagoon or habitat occurred in low numbers. Ten species dominated assemblages and accounted for more than 83% of all individuals sampled. In both lagoons, assemblages in the deep habitat consistently differed to those in the shallow strata (regardless of habitat). Several species were caught more frequently or in larger numbers in the deep habitat. Assemblages in the two shallow habitats did not differ consistently and were dominated by the same species and sizes of fish, possibly due to habitat heterogeneity and the scale and method of sampling. Within each lagoon, very few between location differences in assemblages within each habitat were observed. Consistent differences in assemblages were detected between lagoons for the shallow bare and deep habitats, indicating there were some intrinsic differences in ichthyofauna between lagoons. Assemblages in spring differed to those in summer, which differed to those in winter for the shallow bare habitat in both lagoons, and the deep habitat in only one lagoon. Fish-habitat relationships are complex and differences in the fish fauna between habitats were often temporally inconsistent. This study highlights the need for greater testing of habitat relationships in space and time to assess the generality of observations and to identify the processes responsible for structuring assemblages.

  15. ASTER, ALI and Hyperion sensors data for lithological mapping and ore minerals exploration.

    PubMed

    Beiranvand Pour, Amin; Hashim, Mazlan

    2014-01-01

    This paper provides a review of the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), Advanced Land Imager (ALI), and Hyperion data and applications of the data as a tool for ore minerals exploration, lithological and structural mapping. Spectral information extraction from ASTER, ALI, and Hyperion data has great ability to assist geologists in all disciplines to map the distribution and detect the rock units exposed at the earth's surface. The near coincidence of Earth Observing System (EOS)/Terra and Earth Observing One (EO-1) platforms allows acquiring ASTER, ALI, and Hyperion imagery of the same ground areas, resulting accurate information for geological mapping applications especially in the reconnaissance stages of hydrothermal copper and gold exploration, chromite, magnetite, massive sulfide and uranium ore deposits, mineral components of soils and structural interpretation at both regional and district scales. Shortwave length infrared and thermal infrared bands of ASTER have sufficient spectral resolution to map fundamental absorptions of hydroxyl mineral groups and silica and carbonate minerals for regional mapping purposes. Ferric-iron bearing minerals can be discriminated using six unique wavelength bands of ALI spanning the visible and near infrared. Hyperion visible and near infrared bands (0.4 to 1.0 μm) and shortwave infrared bands (0.9 to 2.5 μm) allowed to produce image maps of iron oxide minerals, hydroxyl-bearing minerals, sulfates and carbonates in association with hydrothermal alteration assemblages, respectively. The techniques and achievements reviewed in the present paper can further introduce the efficacy of ASTER, ALI, and Hyperion data for future mineral and lithological mapping and exploration of the porphyry copper, epithermal gold, chromite, magnetite, massive sulfide and uranium ore deposits especially in arid and semi-arid territory.

  16. Mineral assemblage transformation of a metakaolin-based waste form after geopolymer encapsulation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Williams, Benjamin D.; Neeway, James J.; Snyder, Michelle M. V.

    2016-05-01

    Current plans for nuclear waste vitrification at the Hanford Tank Waste Treatment and Immobilization Plant (WTP) lack the capacity to treat all of the low activity waste (LAW) that is not encapsulated in the vitrified product. Fluidized Bed Steam Reforming (FBSR) is one of the supplemental technologies under consideration to fill this gap. The FBSR process results in a granular product mainly composed of feldspathoid mineral phases that encapsulate the LAW and other contaminants of concern (COCs). In order to better understand the characteristics of the FBSR product, characterization testing has been performed on the granular product as well asmore » the granular product encapsulated in a monolithic geopolymer binder. The non-radioactive simulated tank waste samples created for use in this study are the result of a 2008 Department of Energy sponsored Engineering Scale Technology Demonstration (ESTD) in 2008. These samples were created from waste simulant that was chemically shimmed to resemble actual tank waste, and rhenium has been used as a substitute for technetium. Another set of samples was created by the Savannah River Site Bench-Scale Reformer (BSR) using a chemical shim of Savannah River Site Tank 50 waste in order to simulate a blend of 68 Hanford tank wastes. This paper presents results from coal and moisture removal tests along with XRD, SEM, and BET analyses showing that the major mineral components are predominantly sodium aluminosilicate minerals and that the mineral product is highly porous. Results also show that the materials pass the short-term leach tests: the Toxicity Characteristic Leaching Procedure (TCLP) and Product Consistency Test (PCT).« less

  17. Recent saltmarsh foraminiferal assemblages from Iceland

    NASA Astrophysics Data System (ADS)

    Lübbers, Julia; Schönfeld, Joachim

    2018-01-01

    This study reports for the first time boreal to subarctic intertidal foraminiferal assemblages from saltmarshes at Borgarnes and Faskrudsfjördur on Iceland. The composition of living and dead foraminiferal assemblages was investigated along transects from the tidal flat to the highest reach of halophytic plants. The foraminiferal assemblages from Borgarnes showed 18 species in the total foraminiferal assemblage of which only 7 species were recorded in the living fauna. The assemblages were dominated by agglutinated taxa, whereas 3 calcareous species were recorded, of which only Haynesina orbicularis was found in the living fauna. The distribution limit of calcifying species corresponds to the lower boundary of the lower saltmarsh vegetation zone. Furthermore, calcareous tests showed many features of dissolution, which is an indication of a carbonate corrosive environment. The species forming the dead assemblages were mainly derived from the ambient intertidal areas and were displaced by tidal currents into the saltmarsh. The foraminiferal assemblages from Faskrudsfjördur showed two species, of which only one species was recorded in the living fauna. The assemblage was dominated by the agglutinated foraminifer Trochaminita irregularis. The foraminiferal species recorded on Iceland were the same as commonly found elsewhere in Europa. Since no species was found which is endemic to North America, Iceland is considered part of the European bio province. The foraminiferal could have been immigrated to Iceland from Europe through warm water currents, migratory birds or marine traffic since the last Ice Age.

  18. Heavy minerals in the 2011 Tohoku-oki tsunami deposits—insights into sediment sources and hydrodynamics

    NASA Astrophysics Data System (ADS)

    Jagodziński, Robert; Sternal, Beata; Szczuciński, Witold; Chagué-Goff, Catherine; Sugawara, Daisuke

    2012-12-01

    The 2011 Tohoku-oki tsunami left sand and mud deposits more than 4 km inland on the coastal plain of Sendai, Japan. The tsunami deposits, pre-tsunami soils and beach sediments were analysed for grain size, and heavy mineral content and assemblages to test the applicability of heavy mineral analyses in the identification of tsunami deposits and interpretation of associated sedimentation processes. Heavy minerals comprised on average 35% of the tsunami deposit in the 0.125-0.25 mm grain size fraction. The most common were orthopyroxenes, clinopyroxenes, amphiboles, limonites and opaque minerals. Heavy mineral concentrations and assemblages were similar in the tsunami deposits, beach and pre-tsunami soils and sediments and thus tsunami deposits could not simply be identified based on their heavy minerals. Sediment provenance analysis revealed that tsunami deposits left within 1.5 km of the shoreline were mostly eroded from the beach, dune and local soils, while deposits farther inland (> 1.5 km) were mostly derived from local soil erosion. No evidence was found for a significant contribution of offshore sediments. Detailed analyses revealed that the lowermost portion of tsunami deposits was mostly of local origin, while the sediment source of the upper portion was variable. A comparison with a previous study of heavy minerals in 2004 IOT deposits confirms that heavy minerals in tsunami deposits are mostly source-dependent and may represent a useful supplementary tool in studies of tsunami deposits. However, the interpretation must always be placed in the local geological context and corroborated with other "tsunami proxies".

  19. Effect of pressure on ore mineral solubilities under hydrothermal conditions.

    USGS Publications Warehouse

    Hemley, J.J.; Cygan, G.L.; d'Angelo, W. M.

    1986-01-01

    The combined solubilities of Fe, Zn and Pb sulphides were determined at elevated P and T in chloride solutions buffered in pH by a silicate assemblage of quartz monzonite composition plus added muscovite, and buffered in fS2 and fO2 by the assemblage pyrite-pyrrhotite-magnetite. Higher T and higher chloride concentration favour higher metal solubilities, but the P effect is opposite. At 500oC, 0.5 kbar and 1 M total chloride, Fe, Zn, Pb solubilities were 8500, 4300 and 8700 ppm, respectively, whereas at 1 kbar they were 4200, 2400 and 2600 ppm, and at 2 kbar, 1700, 800 and 1200 ppm. The P effect is of considerable importance to problems of ore-mineral transport; the metal could be carried over long distances on a decreasing P gradient so long as the T decreases were sufficient; this condition could be approximated by a near-adiabatic transport cooling path. Such a condition is probably common for hydrothermal processes involving fairly deep-seated sources of heat and mineral components.-L.C.H.

  20. Orogenic-type copper-gold-arsenic-(bismuth) mineralization at Flatschach (Eastern Alps), Austria

    NASA Astrophysics Data System (ADS)

    Raith, Johann G.; Leitner, Thomas; Paar, Werner H.

    2015-10-01

    Structurally controlled Cu-Au mineralization in the historic Flatschach mining district (Styria, Austria) occurs in a NE-SW to NNE-WSW oriented vein system as multiple steep-dipping calcite-(dolomite)-quartz veins in amphibolite facies metamorphic rocks (banded gneisses/amphibolites, orthogneisses, metagranitoids) of the poly-metamorphosed Austroalpine Silvretta-Seckau nappe. Vein formation postdated ductile deformation events and Eoalpine (Late Cretaceous) peak metamorphism but predated Early to Middle Miocene sediment deposition in the Fohnsdorf pull-apart basin; coal-bearing sediments cover the metamorphic basement plus the mineralized veins at the northern edge of the basin. Three gold-bearing ore stages consist of a stage 1 primary hydrothermal (mesothermal?) ore assemblage dominated by chalcopyrite, pyrite and arsenopyrite. Associated minor minerals include alloclasite, enargite, bornite, sphalerite, galena, bismuth and matildite. Gold in this stage is spatially associated with chalcopyrite occurring as inclusions, along re-healed micro-fractures or along grain boundaries of chalcopyrite with pyrite or arsenopyrite. Sericite-carbonate alteration is developed around the veins. Stage 2 ore minerals formed by the replacement of stage 1 sulfides and include digenite, anilite, "blue-remaining covellite" (spionkopite, yarrowite), bismuth, and the rare copper arsenides domeykite and koutekite. Gold in stage 2 is angular to rounded in shape and occurs primarily in the carbonate (calcite, Fe-dolomite) gangue and less commonly together with digenite, domeykite/koutekite and bismuth. Stage 3 is a strongly oxidized assemblage that includes hematite, cuprite, and various secondary Cu- and Fe-hydroxides and -carbonates. It formed during supergene weathering. Stage 1 and 2 gold consists mostly of electrum (gold fineness 640-860; mean = 725; n = 46), and rare near pure gold (fineness 930-940; n = 6). Gold in stage 3 is Ag-rich electrum (fineness 350-490, n = 12), and has a

  1. Phytoplankton Assemblage Patterns in the Southern Mid-Atlantic Bight

    NASA Technical Reports Server (NTRS)

    Makinen, Carla; Moisan, Tiffany A. (Editor)

    2012-01-01

    As part of the Wallops Coastal Oceans Observing Laboratory (Wa-COOL) Project, we sampled a time-series transect in the southern Mid-Atlantic Bight (MAB) biweekly. Our 2-year time-series data included physical parameters, nutrient concentrations, and chlorophyll a concentrations. A detailed phytoplankton assemblage structure was examined in the second year. During the 2-year study, chlorophyll a concentration (and ocean color satellite imagery) indicated that phytoplankton blooms occurred in January/February during mixing conditions and in early autumn under stratified conditions. The chlorophyll a concentrations ranged from 0.25 microgram 1(exp -1) to 15.49 microgram 1(exp -1) during the 2-year period. We were able to discriminate approximately 116 different species under phase contrast microscopy. Dominant phytoplankton included Skeletonema costatum, Rhizosolenia spp., and Pseudo-nitzschia pungens. In an attempt to determine phytoplankton species competition/succession within the assemblage, we calculated a Shannon Weaver diversity index for our diatom microscopy data. Diatom diversity was greatest during the winter and minimal during the spring. Diatom diversity was also greater at nearshore stations than at offshore stations. Individual genera appeared patchy, with surface and subsurface patches appearing abruptly and persisting for only 1-2 months at a time. The distribution of individual species differed significantly from bulk variables of the assemblage (chlorophyll a ) and total phytoplankton assemblage (cells), which indicates that phytoplankton species may be limited in growth in ways that differ from those of the total assemblage. Our study demonstrated a highly diverse phytoplankton assemblage throughout the year, with opportunistic species dominating during spring and fall in response to seasonal changes in temperature and nutrients in the southern MAB.

  2. Littoral zone fish assemblages of northern Cayuga Lake.

    USGS Publications Warehouse

    McKenna, James E.

    2001-01-01

    Fish assemblages from northern Cayuga Lake were examined for patterns in temporal structure. Fish assemblages changed significantly between seasons. Bluegill (Lepomis macrochirus), bluntnose minnow (Pimephales notatus), and smallmouth bass (Micropterus dolomieu) formed the basis for most assemblages, but the spring assemblage was dominated by common carp (Cyprinus carpio). Correlations between community structure and abiotic factors were identified. Ten abiotic factors strongly influenced species assemblages, including phosphorus concentration, but could not fully explain differences between assemblages. Results indicate that the seasonal pattern of fish assemblage structure and abundance of fish that tend to feed in the water column were related to the annual cycle of productivity in the lake and behavioral adaptations of the fish.

  3. Mineralogy, paragenesis, and mineral zoning of the Bulldog Mountain vein system, Creede District, Colorado

    USGS Publications Warehouse

    Plumlee, Geoffrey S.; Heald Whitehouse-Veaux, Pamela

    1994-01-01

    The Bulldog Mountain vein system, Creede district, Colorado, is one of four major epithermal vein systems from which the bulk of the district's historical Ag-Pb-Zn-Cu production has come. Ores deposited along the vein system were discovered in 1965 and were mined from 1969 to 1985.Six temporally gradational mineralization stages have been identified along the Bulldog Mountain vein system, each with a characteristic suite of minerals deposited or leached and a characteristic distribution within the vein system; some of these stages are also strongly zoned within the vein system. Stage A was dominated by deposition of rhodochrosite along the lower levels of the Bulldog Mountain ore zone. Stage B in the northern parts of the ore zone is characterized by abundant fine-grained sphalerite and galena, with lesser tetrahedrite and minor chlorite and hematite. With increasing elevation to the south, stage B ores become progressively more barite and silver rich, with alternating barite and fine-grained sphalerite + galena generations; native silver + or - acanthite assemblages are also locally abundant within southern stage B barite sulfide ores, whereas chalcopyrite and other Cu and Ag sulfides and sulfosalts are present erratically in minor amounts. Stage C in the upper and northern portions of the ore zone is characterized by abundant quartz and fluorite, minor adularia, hematite, Mn siderite, sphalerite, and galena, and major leaching of earlier barite; to the south, some barite and sulfides may have been deposited. Stage D sphalerite and galena were deposited in the upper and northern portions of the ore zone; a barite- and silver-rich facies of this stage may also be present in the southern portions of the vein system. Late in stage D, mineralogically complex assemblages containing chalcopyrite, tetrahedrite, polybasite, bornite, pyrargyrite, and a variety of other sulfides and sulfosalts were deposited in modest amounts throughout the vein system. This complex

  4. The endemic Patagonian vespertilionid assemblage is a depauperate ecomorphological vicariant of species-rich neotropical assemblages

    PubMed Central

    Giannini, Norberto P.

    2017-01-01

    Abstract Vespertilionidae is the most diverse chiropteran family, and its diversity is concentrated in warm regions of the World; however, due to physiological and behavioral adaptations, these bats also dominate bat faunas in temperate regions. Here we performed a comparative study of vespertilionid assemblages from two broad regions of the New World, the cold and harsh Patagonia, versus the remaining temperate-to-subtropical, extra-Patagonian eco-regions of the South American Southern Cone. We took an ecomorphological approach and analyzed the craniodental morphological structure of these assemblages within a phylogenetic framework. We measured 17 craniodental linear variables from 447 specimens of 22 currently recognized vespertilionid species of the study regions. We performed a multivariate analysis to define the morphofunctional space, and calculated the pattern and degree of species packing for each assemblage. We assessed the importance of phylogeny and biogeography, and their impact on depauperate (Patagonian) versus rich (extra-Patagonian) vespertilionid assemblages as determinants of morphospace structuring. We implemented a sensitivity analysis associated to small samples of rare species. The morphological patterns were determined chiefly by the evolutionary history of the family. The Patagonian assemblage can be described as a structurally similar but comparatively depauperate ecomorphological version of those assemblages from neighboring extra-Patagonian eco-regions. The Patagonian assemblage seems to have formed by successively adding populations from Northern regions that eventually speciated in the region, leaving corresponding sisters (vicariants) in extra-Patagonian eco-regions that continued to be characteristically richer. Despite being structurally akin, degree of species packing in Patagonia was comparatively very low, which may reflect the effect of limited dispersal success into a harsh region for bat survival. PMID:29492009

  5. Specificity of pyrometamorphic minerals of the ellestadite group

    NASA Astrophysics Data System (ADS)

    Zateeva, S. N.; Sokol, E. V.; Sharygin, V. V.

    2007-12-01

    Numerous rare and new mineral species are synthesized during the process of pyrometamorphism (Gross, 1977; Chesnokov et al., 1987; Chesnokov and Shcherbakova, 1991; Chesnokov, 1999), including silicooxides, chloride-, fluoride, and sulfate-silicates, carbonate-sulfides, chloride-oxides, etc. Having made sense of numerous findings of compounds of this type, Chesnokov (1999) set forth the concept of the crystallochemical transition at extreme temperatures attaining 1200-1450°C in pyrogenic systems. First of all, intertype transitions (oxygen-bearing-oxygen-free) and interclass transitions (chloride-silicate, carbonate-sulfide, chlorideoxide) are realized. The specificity of pyrometamorphic mineral assemblages consists in the abundance of silicates with additional anions (F-, Cl-, (CO3)2-) (Sokol et al., 2005). Minerals of the ellestadite group Ca10(SiO4)3 - x (SO4)3 - x (PO4)2 x (OH,F,Cl)2 are a spectacular example of these features. In the general case, they are silicate-sulfate-phosphate-hydroxide-chlorides-fluorides. The detailed description of these minerals based on the study of the original collection of pyrometamorphic minerals is presented in this paper.

  6. Glaucophane chloritoid-bearing assemblages from NE Oman: petrologic significance and a petrogenetic grid for high P metapelites

    NASA Astrophysics Data System (ADS)

    El-Shazly, A. K.; Liou, J. G.

    1991-04-01

    Pelitic layers and lenses interbedded with blueschists and eclogites in Saih Hatat, NE Oman contain chloritoid- and sodic amphibole-bearing mineral assemblages that are useful for reconstructing the P-T history of the area. Textural and mineral chemical relations suggest that coexisting glaucophane (Gln) and chloritoid (Ctd) formed at the expense of chlorite (Chl)+paragonite (Pg) and later broke down to garnet (Gt)+Pg during prograde metamorphism according to the reaction: Gln+Ctd+Qz=Gt+Pg+H2O. During retrogression, Gln and Chl first formed at the expense of Gt and Pg, followed by the breakdown of Ctd and Gt to Chl. The final stages of retrogression are marked by the breakdown of Gln to an aggregate of Chl+albite (Ab). A projection from quartz (Qz), H2O and phengite (Ph) on the (Al2O3+Fe2O3)-(FeO+MgO)-Na2O plane in the system NFMASH is best suited for the representation of the phase relations in high P metapelites. Petrogenetic grids for the model systems NMASH and NFASH were calculated using program GEO-CALC (Berman et al. 1987) and its database (Berman 1988) after the retrieval of S{i/o}and ΔH{f/o}for Gln and Ctd by mathematical programming and calculating all possible reactions among Gln, Ctd, Chl, jadeite (Jd), Ab, Gt, Pg, talc (Tc), pyrophyllite (Prl) and kyanite (Ky). The calculated petrogenetic grid for the system NFASH shows that Fe-Ctd and ferroglaucophane coexist at P>6.5 kbar and T<525°C, whereas the assemblage: Ct-Gln-Pg is stable between 435 and 630°C and P>6 kbar. This grid is consistent with the P-T estimates for high P metapelites from Oman, New Caledonia, Seward Peninsula, Ile de Groix, Sifnos and Peloponnese, where Gln+Ctd bearing units are interbedded with cofacial mafic blueschists and eclogites. The grid also explains the observed textural relations in the metapelites of Oman, and is consistent with the “clockwise” P-T path proposed for this area, but differs from the grids of Guiraud et al. (1990) in showing a larger stability field for

  7. Weathering of almandine garnet: influence of secondary minerals on the rate-determining step, and implications for regolith-scale Al mobilization

    Treesearch

    Jason R. Price; Debra S. Bryan-Ricketts; Diane Anderson; Michael A. Velbel

    2013-01-01

    Secondary surface layers form by replacement of almandine garnet during chemical weathering. This study tested the hypothesis that the kinetic role of almandine's weathering products, and the consequent relationships of primary-mineral surface texture and specific assemblages of secondary minerals, both vary with the solid-solution-controlled variations in Fe and...

  8. Characterization of porosity in sulfide ore minerals: A USANS/SANS study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Xia, F.; Zhao, J.; Etschmann, B. E.

    Porosity plays a key role in the formation and alteration of sulfide ore minerals, yet our knowledge of the nature and formation of the residual pores is very limited. Herein, we report the application of ultra-small-angle neutron scattering and small-angle neutron scattering (USANS/SANS) to assess the porosity in five natural sulfide minerals (violarite, marcasite, pyrite, chalcopyrite, and bornite) possibly formed by hydrothermal mineral replacement reactions and two synthetic sulfide minerals (violarite and marcasite) prepared experimentally by mimicking natural hydrothermal conditions. USANS/SANS data showed very different pore size distributions for these minerals. Natural violarite and marcasite tend to possess less poresmore » in the small size range (<100 nm) compared with their synthetic counterparts. This phenomenon is consistent with a higher degree of pore healing or diagenetic compaction experienced by the natural violarite and marcasite. Surprisingly, nanometer-sized (<20 nm) pores were revealed for a natural pyrite cube from La Rioga, Spain, and the sample has a pore volume fraction of ~7.7%. Both chalcopyrite and bornite from the massive sulfide assemblage of the Olympic Dam deposit in Roxby Downs, South Australia, were found to be porous with a similar pore volume fraction (~15%), but chalcopyrite tends to have a higher proportion of nanometer-size pores centered at ~4 nm while bornite tends to have a broader pore size distribution. The specific surface area is generally low for these minerals ranging from 0.94 to 6.28 m2/g, and the surfaces are generally rough as surface fractal behavior was observed for all these minerals. This investigation has demonstrated that USANS/SANS is a very useful tool for analyzing porosity in ore minerals. We believe that with this quantified porosity information a deeper understanding of the complex fluid flow behavior within the porous minerals can be expected.« less

  9. Biomimetic mineralization: long-term observations in patients with dentin sensitivity.

    PubMed

    Guentsch, Arndt; Seidler, Karin; Nietzsche, Sandor; Hefti, Arthur F; Preshaw, Philip M; Watts, David C; Jandt, Klaus D; Sigusch, Bernd W

    2012-04-01

    Cervical tooth erosion is increasingly observed among adults and frequently associated with dentin sensitivity (DS). This study evaluated the effectiveness on DS of a biomimetic mineralization system (BIMIN) in comparison to the current standard treatment (Gluma(®) Desensitizer, Gluma). In this single-blind, 2-arm study, 40 patients with confirmed cervical DS were randomized to either the test group or the positive control group. A Visual-Analog-Scale (VAS) was used to assess DS following stimulation of the exposed dentin with a 2-s air blast. Assessments were made at baseline (pre-treatment), 2 days, 4, 8 and 12 weeks, and 12 months after treatment. Two-stage replicas were obtained from the treated teeth and gold sputtered at baseline, and 2 days, 3 and 12 months after treatment. Surface topography of the treated cervical lesions and occlusion of dentinal tubules were investigated using scanning electron microscopy (SEM). Both treatments led to a statistically significant reduction (P<0.0001) in DS that persisted over the entire 12-month observation period. Differences in DS between the treatments were not statistically significant. SEM photomicrographs demonstrated that a mineral layer concealed the dentinal tubules in the test group. In contrast, numerous dentinal tubules remained visible in cervical defects that were treated with Gluma. A biomimetic mineralization kit was successfully used to treat patients exhibiting DS. The effect was similar to using Gluma, and was likely the result of the deposition of an enamel-like layer on the exposed cervical dentin. Copyright © 2012 Academy of Dental Materials. Published by Elsevier Ltd. All rights reserved.

  10. Ichthyoplankton assemblage structure of springs in the Yangtze Estuary revealed by biological and environmental visions.

    PubMed

    Zhang, Hui; Xian, Weiwei; Liu, Shude

    2015-01-01

    The ichthyoplankton assemblage structure in the Yangtze Estuary was analyzed based on four springs in 1999, 2001, 2004 and 2007 in order to provide detailed characterizations of the ichthyoplankton assemblage in springs, examine the long-term dynamics of spring ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary. Forty-two ichthyoplankton species belonging to 23 families were collected. Engraulidae was the most abundant family, including six species and comprising 67.91% of the total catch. Only four species (Coilia mystus, Engraulis japonicus, Trachidermis fasciatus and Allanetta bleekeri) could be considered dominant, accounting for 88.70% of total abundance. The structure of the ichthyoplankton spring assemblage persisted on an annual basis, with the dominant species reappearing consistently even though their abundance fluctuated from year to year. This inter-annual variation probably reflects variable environmental conditions influenced by jellyfish blooms, declining river flow, and overfishing. Canonical correspondence analysis indicated aspatial structure of the ichthyoplankton assemblage in three areas: (1) an inner assemblage dominated by C. mystus; (2) a central assemblage dominated by A. bleekeri and T. fasciatus; and (3) a shelf assemblage featuring E. japonicus. The observed ichthyoplankton assemblage structure appears to be strongly influenced by depth, salinity and suspended particulate matter gradients.

  11. Ichthyoplankton assemblage structure of springs in the Yangtze Estuary revealed by biological and environmental visions

    PubMed Central

    Zhang, Hui; Liu, Shude

    2015-01-01

    The ichthyoplankton assemblage structure in the Yangtze Estuary was analyzed based on four springs in 1999, 2001, 2004 and 2007 in order to provide detailed characterizations of the ichthyoplankton assemblage in springs, examine the long-term dynamics of spring ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary. Forty-two ichthyoplankton species belonging to 23 families were collected. Engraulidae was the most abundant family, including six species and comprising 67.91% of the total catch. Only four species (Coilia mystus, Engraulis japonicus, Trachidermis fasciatus and Allanetta bleekeri) could be considered dominant, accounting for 88.70% of total abundance. The structure of the ichthyoplankton spring assemblage persisted on an annual basis, with the dominant species reappearing consistently even though their abundance fluctuated from year to year. This inter-annual variation probably reflects variable environmental conditions influenced by jellyfish blooms, declining river flow, and overfishing. Canonical correspondence analysis indicated aspatial structure of the ichthyoplankton assemblage in three areas: (1) an inner assemblage dominated by C. mystus; (2) a central assemblage dominated by A. bleekeri and T. fasciatus; and (3) a shelf assemblage featuring E. japonicus. The observed ichthyoplankton assemblage structure appears to be strongly influenced by depth, salinity and suspended particulate matter gradients. PMID:26312180

  12. Patterns in larval fish assemblages under the influence of the Brazil current

    NASA Astrophysics Data System (ADS)

    Katsuragawa, M.; Dias, J. F.; Harari, J.; Namiki, C.; Zani-Teixeira, M. L.

    2014-10-01

    The present work investigates the composition of larval fish assemblages in the area under the influence of the Brazil Current (BC) off the Southeastern Brazilian Bight. Ichthyoplankton was sampled during two oceanographic cruises (November-December/1997 - spring; May/2001 - autumn) with bongo nets oblique tows. Seasonal variation and a coastal-ocean pattern in the distribution of larval fish was observed and was influenced by the dynamics of the water masses, Coastal Water (CW), Tropical Water (TW) and South Atlantic Central Water (SACW), the last two of which were transported by the BC. During spring, the shelf assemblage was dominated by larvae of small pelagic fishes, such as Sardinella brasiliensis, Engraulis anchoita and Trachurus lathami, and was associated with the enrichment of shallow water by the SACW upwelling. In autumn, the abundance of coastal species larvae was reduced, and the shelf assemblage was dominated by Bregmaceros cantori. A transitional assemblage occurred during the spring, and comprised mesopelagic and coastal species. In both seasons, the oceanic assemblage was dominated by the mesopelagic families, Myctophidae, Sternopthychidae and Phosichthyidae. The oceanographic conditions also demonstrated clear differences between the northern and southern subareas, particularly in the shelf zone. This was especially the case during autumn when a latitudinal gradient in larval fish assemblages became more pronounced.

  13. Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages

    PubMed Central

    Pasulka, Alexis L.; Marlow, Jeffrey J.; Grupe, Benjamin M.; Levin, Lisa A.

    2015-01-01

    ABSTRACT Marine methane seeps are globally distributed geologic features in which reduced fluids, including methane, are advected upward from the subsurface. As a result of alkalinity generation during sulfate-coupled methane oxidation, authigenic carbonates form slabs, nodules, and extensive pavements. These carbonates shape the landscape within methane seeps, persist long after methane flux is diminished, and in some cases are incorporated into the geologic record. In this study, microbial assemblages from 134 native and experimental samples across 5,500 km, representing a range of habitat substrates (carbonate nodules and slabs, sediment, bottom water, and wood) and seepage conditions (active and low activity), were analyzed to address two fundamental questions of seep microbial ecology: (i) whether carbonates host distinct microbial assemblages and (ii) how sensitive microbial assemblages are to habitat substrate type and temporal shifts in methane seepage flux. Through massively parallel 16S rRNA gene sequencing and statistical analysis, native carbonates are shown to be reservoirs of distinct and highly diverse seep microbial assemblages. Unique coupled transplantation and colonization experiments on the seafloor demonstrated that carbonate-associated microbial assemblages are resilient to seep quiescence and reactive to seep activation over 13 months. Various rates of response to simulated seep quiescence and activation are observed among similar phylogenies (e.g., Chloroflexi operational taxonomic units) and similar metabolisms (e.g., putative S oxidizers), demonstrating the wide range of microbial sensitivity to changes in seepage flux. These results imply that carbonates do not passively record a time-integrated history of seep microorganisms but rather host distinct, diverse, and dynamic microbial assemblages. PMID:26695630

  14. Bacterial assemblages of the eastern Atlantic Ocean reveal both vertical and latitudinal biogeographic signatures

    NASA Astrophysics Data System (ADS)

    Friedline, C. J.; Franklin, R. B.; McCallister, S. L.; Rivera, M. C.

    2012-06-01

    Microbial communities are recognized as major drivers of the biogeochemical processes in the oceans. However, the genetic diversity and composition of those communities is poorly understood. The aim of this study is to investigate the composition of bacterial assemblages in three different water layer habitats: surface (2-20 m), deep chlorophyll maximum (DCM; 28-90 m), and deep (100-4600 m) at nine stations along the eastern Atlantic Ocean from 42.8° N to 23.7° S. The sampling of three discrete, predefined habitat types from different depths, Longhurstian provinces, and geographical locations allowed us to investigate whether marine bacterial assemblages show spatial variation and to determine if the observed spatial variation is influenced by current environmental conditions, historical/geographical contingencies, or both. The PCR amplicons of the V6 region of the 16S rRNA from 16 microbial assemblages were pyrosequenced, generating a total of 352 029 sequences; after quality filtering and processing, 257 260 sequences were clustered into 2871 normalized operational taxonomic units (OTU) using a definition of 97% sequence identity. Community ecology statistical analyses demonstrate that the eastern Atlantic Ocean bacterial assemblages are vertically stratified and associated with water layers characterized by unique environmental signals (e.g., temperature, salinity, and nutrients). Genetic compositions of bacterial assemblages from the same water layer are more similar to each other than to assemblages from different water layers. The observed clustering of samples by water layer allows us to conclude that contemporary environments are influencing the observed biogeographic patterns. Moreover, the implementation of a novel Bayesian inference approach that allows a more efficient and explicit use of all the OTU abundance data shows a distance effect suggesting the influence of historical contingencies on the composition of bacterial assemblages. Surface

  15. Low-Fe(III) Greenalite Was a Primary Mineral From Neoarchean Oceans

    NASA Astrophysics Data System (ADS)

    Johnson, Jena E.; Muhling, Janet R.; Cosmidis, Julie; Rasmussen, Birger; Templeton, Alexis S.

    2018-04-01

    Banded iron formations (BIFs) represent chemical precipitation from Earth's early oceans and therefore contain insights into ancient marine biogeochemistry. However, BIFs have undergone multiple episodes of alteration, making it difficult to assess the primary mineral assemblage. Nanoscale mineral inclusions from 2.5 billion year old BIFs and ferruginous cherts provide new evidence that iron silicates were primary minerals deposited from the Neoarchean ocean, contrasting sharply with current models for BIF inception. Here we used multiscale imaging and spectroscopic techniques to characterize the best preserved examples of these inclusions. Our integrated results demonstrate that these early minerals were low-Fe(III) greenalite. We present potential pathways in which low-Fe(III) greenalite could have formed through changes in saturation state and/or iron oxidation and reduction. Future constraints for ancient ocean chemistry and early life's activities should include low-Fe(III) greenalite as a primary mineral in the Neoarchean ocean.

  16. Do Invertebrate Activity and Current Velocity Affect Fungal Assemblage Structure in Leaves?

    NASA Astrophysics Data System (ADS)

    Ferreira, Verónica; Graça, Manuel A. S.

    2006-02-01

    In this study we assessed the effect of current velocity and shredder presence, manipulated in artificial channels, on the structure of the fungal assemblage colonizing alder (Alnus glutinosa (L.) Gaertner) leaves incubated in coarse and fine mesh bags. Fungal sporulation rates, cumulative conidial production and number of species of aquatic hyphomycetes were higher in leaves exposed to high rather than to low current velocity. The opposite was observed regarding Simpson's index (D) on the fungal assemblage. Some species of aquatic hyphomycetes were consistently stimulated in high current channels. No effect of shredders or of mesh type was observed.

  17. Using MicroFTIR to Map Mineral Distributions in Serpentinizing Systems

    NASA Astrophysics Data System (ADS)

    Johnson, A.; Kubo, M. D.; Cardace, D.

    2016-12-01

    Serpentinization, the water-rock reaction forming serpentine mineral assemblages from ultramafic precursors, can co-occur with the production of hydrogen, methane, and diverse organic compounds (McCollom and Seewald, 2013), evolving water appropriate for carbonate precipitation, including in ophiolite groundwater flow systems and travertine-producing seeps/springs. Serpentinization is regarded as a geologic process important to the sustainability of the deep biosphere (Schrenk et al., 2013) and the origin of life (Schulte et al., 2006). In this study, we manually polished wafers of ultramafic rocks/associated minerals (serpentinite, peridotite, pyroxenite, dunite; olivine, diopside, serpentine, magnetite), and travertine/constituent minerals (carbonate crusts; calcite, dolomite), and observed mineral boundaries and interfaces using µFTIR analysis in reflection mode. We used a Thermo Nicolet iS50 FTIR spectrometer coupled with a Continuum IR microscope to map minerals/boundaries. We identify, confirm, and document FTIR wavenumber regions linked to serpentinite- and travertine-associated minerals by referencing IR spectra (RRUFF) and aligning with x-ray diffraction. The ultramafic and carbonate samples are from the following field localities: McLaughlin Natural Reserve - a UC research reserve, Lower Lake, CA; Zambales, PH; Ontario, CA; Yellow Dog, MI; Taskesti, TK; Twin Sisters Range, WA; Sharon, MA; Klamath Mountains, CA; Dun Mountain, NZ; and Sussex County, NJ. Our goals are to provide comprehensive µFTIR characterization of mineral profiles important in serpentinites and related rocks, and evaluate the resolving power of µFTIR for the detection of mineral-encapsulated, residual organic compounds from biological activity. We report on µFTIR data for naturally occurring ultramafics and travertines and also estimate the limit of detection for cell membrane components in mineral matrices, impregnating increasing mass proportions of xanthan gum in a peridotite sand

  18. Hyperspectral mapping of alteration assemblages within a hydrothermal vug at the Haughton impact structure, Canada

    NASA Astrophysics Data System (ADS)

    Greenberger, Rebecca N.; Mustard, John F.; Osinski, Gordon R.; Tornabene, Livio L.; Pontefract, Alexandra J.; Marion, Cassandra L.; Flemming, Roberta L.; Wilson, Janette H.; Cloutis, Edward A.

    2016-12-01

    Meteorite impacts on Earth and Mars can generate hydrothermal systems that alter the primary mineralogies of rocks and provide suitable environments for microbial colonization. We investigate a calcite-marcasite-bearing vug at the 23 km diameter Haughton impact structure, Devon Island, Nunavut, Canada, using imaging spectroscopy of the outcrop in the field (0.65-1.1 μm) and samples in the laboratory (0.4-2.5 μm), point spectroscopy (0.35-2.5 μm), major element chemistry, and X-ray diffraction analyses. The mineral assemblages mapped at the outcrop include marcasite; marcasite with minor gypsum and jarosite; fibroferrite and copiapite with minor gypsum and melanterite; gypsum, Fe3+ oxides, and jarosite; and calcite, gypsum, clay, microcline, and quartz. Hyperspectral mapping of alteration phases shows spatial patterns that illuminate changes in alteration conditions and formation of specific mineral phases. Marcasite formed from the postimpact hydrothermal system under reducing conditions, while subsequent weathering oxidized the marcasite at low temperatures and water/rock ratios. The acidic fluids resulting from the oxidation collected on flat-lying portions of the outcrop, precipitating fibroferrite + copiapite. That assemblage then likely dissolved, and the changing chemistry and pH resulting from interaction with the calcite-rich host rock formed gypsum-bearing red coatings. These results have implications for understanding water-rock interactions and habitabilities at this site and on Mars.

  19. The formation and stability of saline minerals at the Martian surface

    NASA Astrophysics Data System (ADS)

    Tosca, Nicholas James, III

    Evaporite minerals have been identified throughout the martian sedimentary record. Because evaporites can record detailed paleo-environmental information and often host fossil biosignatures on Earth, they are priority targets for future exploration. However, understanding processes that control the formation of these minerals on Mars requires an understanding of the behavior of Fe in highly concentrated evaporating fluids. In this study, a model is developed using the Pitzer ion interaction approach that accurately describes thermodynamic properties of the Fe2(SO4)3-H2SO4-H 2O system. Incorporating this model into a multicomponent thermodynamic database enables detailed study of evaporite mineral formation and stability on Mars. From geochemical modeling, the variation in evaporite mineralogy on Mars may be traced to volatile-anion input -- a variable intimately tied to pH. Using the "chemical divide" concept, evaporites at the martian surface can be used as sensitive probes of pH, atmospheric composition, and cation proportion in solution. Applying this approach to saline assemblages in Nakhlite meteorites and in Meridiani Planum sediments reveals two geochemical systems; each characterized by different pH and anion proportion. A complicating factor however is the concomitant oxidation of soluble Fe-bearing minerals. Such a process may have contributed to complex Fe mineralogy observed at Meridiani Planum through diagenesis. Fe-oxidation experiments at high ionic strength show a progression of mineral phases that begins with the formation of schwertmannite and subsequent ageing to jarosite and nano-crystalline goethite; a process strongly controlled by pH. Low water activity and small particle size drive the ageing of goethite to hematite which provides the final step of a mechanism that is consistent with the distribution of Fe-minerals at Meridiani Planum. These results show that the instability of Fe2+-sulfate minerals at the martian surface may lead to the

  20. Greenstone-hosted lode-gold mineralization at Dungash mine, Eastern Desert, Egypt

    NASA Astrophysics Data System (ADS)

    Zoheir, Basem; Weihed, Pär

    2014-11-01

    The auriferous quartz ± carbonate veins at Dungash mine, central Eastern Desert of Egypt, are confined to ∼E-trending dilation zones within variably foliated/sheared metavolcanic/volcaniclastic rocks. The vein morphology and internal structures demonstrate formation concurrent with a dextral shear system. The latter is attributed to flexural displacement of folded, heterogeneous rock blocks through transpression increment, late in the Neoproterozoic deformation history of the area. Geochemistry of the host metavolcanic/metavolcaniclastic rocks from the mine area suggests derivation from a low-K, calc-alkaline magma in a subduction-related, volcanic arc setting. In addition, chemistry of disseminated Cr-spinels further constrain on the back-arc basin setting and low-grade metamorphism, typical of gold-hosting greenstone belts elsewhere. Mineralogy of the mineralized veins includes an early assemblage of arsenopyrite-As-pyrite-gersdorffite ± pyrrhotite, a transitional pyrite-Sb-arsenopyrite ± gersdorffite assemblage, and a late tetrahedrite-chalcopyrite-sphalerite-galena-gold assemblage. Based on arsenopyrite and chlorite geothermometers, formation of gold-sulfide mineralization occurred between ∼365 and 280 °C. LA-ICP-MS measurements indicate the presence of refractory Au in arsenian pyrite (up to 53 ppm) and Sb-bearing arsenopyrite (up to 974 ppm). Abundant free-milling gold associated with the late sulfide assemblage may have been mobilized and re-distributed by circulating, lower temperature ore fluids in the waning stages of the hydrothermal system. Based on the isotopic values of vein quartz and carbonate, the calculated average δ18OH2O values of the ore fluids are 5.0 ± 1.4‰ SMOW for quartz, and 3.3 ± 1.4‰ for vein carbonate. The measured carbonate δ13C values correspond to ore fluids with δ13CCO2 = -6.7 ± 0.7‰ PDB. These results suggest a mainly metamorphic source for ore fluids, in good agreement with the vein morphology, textures and

  1. Ground beetle (Coleoptera, Carabidae) assemblages inhabiting Scots pine stands of Puszcza Piska Forest: six-year responses to a tornado impact.

    PubMed

    Skłodowski, Jarosław; Garbalińska, Paulina

    2011-01-01

    Ground beetle assemblages were studied during 2003-08 in the Pisz Forest by comparing stands disturbed by a tornado to undisturbed control stands. The following exploratory questions were put forward. (1) How do the carabid assemblages change during six years following the tornado impact? (2) Does the carabid assemblage recovery begin during the six first post-tornado years? To assess the state of carabid assemblages we used two indices: the MIB (Mean Individual Biomass) and the SPC (Sum of Progressive Characteristics). Carabid assemblages in the disturbed and in the control stands, as expressed by these two indices, were compared using the length of a regression distance (sample distance in a MIB:SPC coordinate system). A cluster analysis revealed that the assemblages of the disturbed and the control stands were different. The tornado-impacted stands produced lower carabid catch rates, but species richness was significantly higher there than in the control stands. They hosted lower proportions of individuals of European species, of large zoophages, and of forest and brachypterous species, than the control stands. The observed reduction in SPC and MIB, and an increase in the regression distances may indicate that the carabid assemblages had not started to recover from the tornado-caused disturbance. Carabid assemblages apparently responded to the tornado in two steps. Firstly, the first three years were characterized by moderate decreases of index values. Secondly, from the fourth to the sixth year after the tornado, many observed changes became magnified. We did not observe clear signals of the recovery of forest carabid assemblages during the six follow-up years.

  2. Water-bearing minerals on mars: source of observed mid-latitude water?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bish, D. L.; Carey, J. W.; Fialips, C. I.

    2003-01-01

    The Odyssey spacecraft documented the existence of heterogeneously distributed hydrogen at martian mid-latitudes, suggesting that large areas of the near-equatorial highlands contain near-surface deposits of 'chemically and/or physically bound H20 and/or OH' in amounts up to 3 .8% equivalent H20. Shallow occurrences of water ice are not stable near the martian equator, making the hydrogen deposits at these latitudes somewhat enigmatic. Clay minerals and zeolites have both been proposed as possible water-bearing constituents on Mars, and both are common terrestrial alteration products of hydrovolcanic basaltic ashes and palagonitic material comparable to those that may be widespread on Mars. Smectites withinmore » martian meteorites, attributed to hydrous alteration on Mars rather than on Earth, provide direct evidence of clay minerals from Mars. In addition, new thermal emission spectrometer (TES) data provide good evidence for unspecified zeolites in martian surface dust [6] . The nature of the hydrogen-containing material observed in the equatorial martian regolith is of particular importance to the question of whether hydrous minerals have formed in the past on Mars. Also, whether these minerals exist in a hydrated (i .e., containing H2O molecules in their structures) or dehydrated state is a crucial question . The existence of hydrous minerals is also important in connection with their possible role in affecting the diurnal variation of the martian atmosphere, in their potential role in unraveling the paleohydrology and paleobiology of Mars, and in their possible use as a water resource to support exploration of the martian mid-latitudes.« less

  3. Fahlore and Sphalerite from the Darasun Gold Deposit in the Eastern Transbaikal Region, Russia: I. Mineral Assemblages and Intergrowths, Chemical Composition, and Its Evolution

    NASA Astrophysics Data System (ADS)

    Lyubimtseva, N. G.; Bortnikov, N. S.; Borisovsky, S. E.; Prokofiev, V. Yu.; Vikent'eva, O. V.

    2018-03-01

    The mineral assemblages, mode of occurrence, and chemical compositions of coexisting fahlore and sphalerite from the Darasun gold deposit have been described. Three generations of fahlore and three generations of sphalerite have been recognized. The FeS content in sphalerite coexisting with fahlore ranges from 0.8 to 9.4 mol %. The complete solid solution series Fe-tetrahedrite-Zn-tetrahedrite-Fe-tennantite-Zn-tennantite reflected in Sb/(Sb + As) and Fe/(Fe + Zn) ratios ranging from 0 to 0.97 and from 0.07 to 1.00, respectively, with a predominant negative relationship between these ratios has been identified for the first time at the deposit. Stepped, oscillatory, and combined stepped-oscillatory growth zonings within fahlore grains and heterogeneous aggregates of fahlore have been found. Fahlore is enriched in As with respect to Sb, and Zn-tetrahedrite is followed by Fe- and Zn-tennantite from early to late generation; Zn-tetrahedrite is followed by Fe-tennantite in zoned grains and overgrown rims; sphalerite crystallized at decreased temperature and sulfur fugacity. The evolution of the chemical composition of fahlores was caused by the evolving temperature, fluid salinity, and conditions of metal migration.

  4. Benthic assemblages of mega epifauna on the Oregon continental margin

    NASA Astrophysics Data System (ADS)

    Hemery, Lenaïg G.; Henkel, Sarah K.; Cochrane, Guy R.

    2018-05-01

    Environmental assessment studies are usually required by a country's administration before issuing permits for any industrial activities. One of the goals of such environmental assessment studies is to highlight species assemblages and habitat composition that could make the targeted area unique. A section of the Oregon continental slope that had not been previously explored was targeted for the deployment of floating wind turbines. We carried out an underwater video survey, using a towed camera sled, to describe its benthic assemblages. Organisms were identified to the lowest taxonomic level possible and assemblages described related to the nature of the seafloor and the depth. We highlighted six invertebrate assemblages and three fish assemblages. For the invertebrates within flat soft sediments areas we defined three different assemblages based on primarily depth: a broad mid-depth (98-315 m) assemblage dominated by red octopus, sea pens and pink shrimps; a narrower mid-depth (250-270 m) assemblage dominated by box crabs and various other invertebrates; and a deeper (310-600 m) assemblage dominated by sea urchins, sea anemones, various snails and zoroasterid sea stars. The invertebrates on mixed sediments also were divided into three different assemblages: a shallow ( 100 m deep) assemblage dominated by plumose sea anemones, broad mid-depth (170-370 m) assemblage dominated by sea cucumbers and various other invertebrates; and, again, a narrower mid-depth (230-270 m) assemblage, dominated by crinoids and encrusting invertebrates. For the fish, we identified a rockfish assemblage on coarse mixed sediments at 170-370 m and another fish assemblage on smaller mixed sediments within that depth range (250-370 m) dominated by thornyheads, poachers and flatfishes; and we identified a wide depth-range (98-600 m) fish assemblage on flat soft sediments dominated by flatfishes, eelpouts and thornyheads. Three of these assemblages (the two broad fish assemblages and the deep

  5. Benthic assemblages of mega epifauna on the Oregon continental margin

    USGS Publications Warehouse

    Hemery, Lenaïg G.; Henkel, Sarah K.; Cochrane, Guy R.

    2018-01-01

    Environmental assessment studies are usually required by a country's administration before issuing permits for any industrial activities. One of the goals of such environmental assessment studies is to highlight species assemblages and habitat composition that could make the targeted area unique. A section of the Oregon continental slope that had not been previously explored was targeted for the deployment of floating wind turbines. We carried out an underwater video survey, using a towed camera sled, to describe its benthic assemblages. Organisms were identified to the lowest taxonomic level possible and assemblages described related to the nature of the seafloor and the depth. We highlighted six invertebrate assemblages and three fish assemblages. For the invertebrates within flat soft sediments areas we defined three different assemblages based on primarily depth: a broad mid-depth (98–315 m) assemblage dominated by red octopus, sea pens and pink shrimps; a narrower mid-depth (250–270 m) assemblage dominated by box crabs and various other invertebrates; and a deeper (310–600 m) assemblage dominated by sea urchins, sea anemones, various snails and zoroasterid sea stars. The invertebrates on mixed sediments also were divided into three different assemblages: a shallow (~100 m deep) assemblage dominated by plumose sea anemones, broad mid-depth (170–370 m) assemblage dominated by sea cucumbers and various other invertebrates; and, again, a narrower mid-depth (230–270 m) assemblage, dominated by crinoids and encrusting invertebrates. For the fish, we identified a rockfish assemblage on coarse mixed sediments at 170–370 m and another fish assemblage on smaller mixed sediments within that depth range (250–370 m) dominated by thornyheads, poachers and flatfishes; and we identified a wide depth-range (98–600 m) fish assemblage on flat soft sediments dominated by flatfishes, eelpouts and thornyheads. Three of these assemblages (the two

  6. Deep-sea nematode assemblage has not recovered 26 years after experimental mining of polymetallic nodules (Clarion-Clipperton Fracture Zone, Tropical Eastern Pacific)

    NASA Astrophysics Data System (ADS)

    Miljutin, Dmitry M.; Miljutina, Maria A.; Arbizu, Pedro Martínez; Galéron, Joëlle

    2011-08-01

    We investigated nematode assemblages inhabiting the 26-year-old track created by experimental deep-sea mining of polymetallic nodules, and two adjacent, undisturbed sites, one with nodules and one without nodules. The aim was to compare density, assemblage structure, and diversity indices in order to assess the process of recovery of the nematode assemblage inhabiting the disturbed site. This experimental dredging was conducted in 1978 by the Ocean Minerals Company (USA) in the area of a French mining claim in the Clarion-Clipperton Fracture Zone (Tropical Eastern Pacific) at a depth of about 5000 m. The nematode assemblage had not returned its initial state 26 years after the experimental dredging: the total nematode density and biomass within the dredging track were significantly lower than outside the track; the biodiversity indices showed significantly lower nematode diversity within the track; and the structure of the nematode assemblage within the track differed significantly from those in the two undisturbed sites outside the track. However, there were no significant differences in the mean body volumes of adult nematodes and adult-juvenile ratios between the track and reference sites. Parameters such as the rate of sediment restoration (which depends on local hydrological conditions) and the degree and character of the disturbance appeared to be of considerable importance for the recovery rate of the deep-sea nematode assemblages and their ability to recolonize disturbed areas. The rates of recolonization and recovery may vary widely in different deep-sea regions.

  7. Sulphur-Rich Melt At Upper Crustal Levels At Cerro La Torta, Central Andes: Evidence From Melt Inclusions Assemblages.

    NASA Astrophysics Data System (ADS)

    Cannatelli, C.; Godoy, B.; Alvear, B.; Moncada, D.

    2016-12-01

    Central Andes present some of the biggest and most important porphyry copper ore deposits in the world. Porphyry copper ore formation is related to precipitation of ore minerals from sulphur and chlorine-rich fluids. Genesis of these deposits occurred 4 km below surface, while mineralized fluids are released by magmatic melts located between 5 and 15 km depth (Sillitoe, 2010). Cerro La Torta is part of a cluster of <105 ka rhyodacitic domes related to the waning stage of the Altiplano-Puna Volcanic Complex at Central Andes (Tierney et al., 2016). These domes reflect a crystal-rich mush layer at the upper crust - named Altiplano-Puna Magma Body (APMB) - which is proposed to be a voluminous partially molten body locate at shallow depth (4-25 km), with a thickness up to 11 km (Ward et al., 2014). Cerro La Torta is a crystal-rich ( 40% vol.) dacitic flow with plagioclase, amphibole, biotite, and quartz phenocrysts on a glassy (up to 50% vol.) groundmass. During detailed petrographic observation, two types of Melt Inclusions Assemblages (MIAs) were observed in the plagioclase. Group I is found in the core of crystals, and contains sulphide, pyrite ± bubbles. Group II of bubble-bearing MIAs is observed at the rim of the phenocrysts, with no associated sulphide mineral present. Melt Inclusions size ranges from 10-40 µm, suggesting an intermediate cooling rate (Roedder 1979). Out hypothesis is that during cooling, Group I MIA is trapped as result of a metal sulfur-rich event, leading to the suggestion that sulphide-bearing MIAs from Cerro La Torta are the evidence of mineralized magmas ponding at shallow crustal levels. Furthermore, the presence of MIAs in the mush-type magmas related to the APMB implies that such systems are suitable to porphyry copper ore generation. Roedder, 1979. The Evolution of the Igneous Rocks. 15-57 Sillitoe, 2010. Econ. Geol. 105:3-41 Tierney et al., 2016. Geology 44:683-686. doi:10.1130/G37968.1Ward et al., 2014. Earth Planet Sci Letters 404:43-54

  8. Ground beetle (Coleoptera, Carabidae) assemblages inhabiting Scots pine stands of Puszcza Piska Forest: six-year responses to a tornado impact

    PubMed Central

    Skłodowski, Jarosław; Garbalińska, Paulina

    2011-01-01

    Abstract Ground beetle assemblages were studied during 2003-08 in the Pisz Forest by comparing stands disturbed by a tornado to undisturbed control stands. The following exploratory questions were put forward. (1) How do the carabid assemblages change during six years following the tornado impact? (2) Does the carabid assemblage recovery begin during the six first post-tornado years? To assess the state of carabid assemblages we used two indices: the MIB (Mean Individual Biomass) and the SPC (Sum of Progressive Characteristics). Carabid assemblages in the disturbed and in the control stands, as expressed by these two indices, were compared using the length of a regression distance (sample distance in a MIB:SPC coordinate system). A cluster analysis revealed that the assemblages of the disturbed and the control stands were different. The tornado-impacted stands produced lower carabid catch rates, but species richness was significantly higher there than in the control stands. They hosted lower proportions of individuals of European species, of large zoophages, and of forest and brachypterous species, than the control stands. The observed reduction in SPC and MIB, and an increase in the regression distances may indicate that the carabid assemblages had not started to recover from the tornado-caused disturbance. Carabid assemblages apparently responded to the tornado in two steps. Firstly, the first three years were characterized by moderate decreases of index values. Secondly, from the fourth to the sixth year after the tornado, many observed changes became magnified. We did not observe clear signals of the recovery of forest carabid assemblages during the six follow-up years. PMID:21738422

  9. Heavy-mineral provenance in an estuarine environment, Willapa Bay, Washington, USA: palaeogeographic implications and estuarine evolution

    USGS Publications Warehouse

    Luepke Bynum, Gretchen

    2007-01-01

    Modern sediments from representative localities in Willapa Bay, Washington, comprise two principal heavy-mineral suites. One contains approximately equivalent amounts of hornblende, orthopyroxene, and clinopyroxene; this is derived from the Columbia River, which discharges into the Pacific Ocean a short distance south of the bay. The other suite, dominated by clinopyroxene, is restricted to sands of rivers flowing into the bay from the east. The heavy-mineral distributions within the bay suggest that sand discharged from the Columbia River, borne north by longshore transport and carried into the bay by tidal currents, accounts for nearly all of the sand within the interior of Willapa Bay today. Pleistocene deposits on the east side of the bay contain three heavy-mineral assemblages, two of which are identical to the modern assemblages described above. These assemblages reflect the relative influence of tidal and fluvial processes on the Late Pleistocene deposits (100,000–200,000 BP. Amino acid racemization in Quaternary shell deposits at Willapa Bay, Washington. Geochimica et Cosmochimica Acta 43, 1505–1520). They are also consistent with those processes inferred on the basis of sedimentary structures and stratigraphic relations in about two-thirds of the samples examined. Anomalies can be explained by recycling of sand from older deposits. The persistence of the two heavy-mineral suites suggests that the pattern of estuarine sedimentation in Late Pleistocene deposits closely resembled that of the modern bay. The third heavy-mineral suite is enriched in epidote and occurs in a few older Pleistocene units. On the north side of the bay, the association of this suite with southwest-directed foresets in cross-bedded gravel indicates derivation from the northeast, perhaps from an area of glacial outwash. The presence of this suite in ancient estuarine sands exposed on the northeast side of the bay suggests that input from this northerly source may have

  10. Vertebrate assemblages from the early Late Cretaceous of southeastern Morocco: An overview

    NASA Astrophysics Data System (ADS)

    Cavin, L.; Tong, H.; Boudad, L.; Meister, C.; Piuz, A.; Tabouelle, J.; Aarab, M.; Amiot, R.; Buffetaut, E.; Dyke, G.; Hua, S.; Le Loeuff, J.

    2010-07-01

    Fossils of vertebrates have been found in great abundance in the continental and marine early Late Cretaceous sediments of Southeastern Morocco for more than 50 years. About 80 vertebrate taxa have so far been recorded from this region, many of which were recognised and diagnosed for the first time based on specimens recovered from these sediments. In this paper, we use published data together with new field data to present an updated overview of Moroccan early Late Cretaceous vertebrate assemblages. The Cretaceous series we have studied encompasses three Formations, the Ifezouane and Aoufous Formations, which are continental and deltaic in origin and are often grouped under the name "Kem Kem beds", and the Akrabou Formation which is marine in origin. New field observations allow us to place four recognised vertebrate clusters, corresponding to one compound assemblage and three assemblages, within a general temporal framework. In particular, two ammonite bioevents characterise the lower part of the Upper Cenomanian ( Calycoceras guerangeri Zone) at the base of the Akrabou Formation and the upper part of the Lower Turonian ( Mammites nodosoides Zone), that may extend into the Middle Turonian within the Akrabou Formation, and allow for more accurate dating of the marine sequence in the study area. We are not yet able to distinguish a specific assemblage that characterises the Ifezouane Formation when compared to the similar Aoufous Formation, and as a result we regard the oldest of the four vertebrate "assemblages" in this region to be the compound assemblage of the "Kem Kem beds". This well-known vertebrate assemblage comprises a mixture of terrestrial (and aerial), freshwater and brackish vertebrates. The archosaur component of this fauna appears to show an intriguingly high proportion of large-bodied carnivorous taxa, which may indicate a peculiar trophic chain, although collecting biases alter this palaeontological signal. A small and restricted assemblage, the

  11. The Effects of Sub-Regional Climate Velocity on the Distribution and Spatial Extent of Marine Species Assemblages.

    PubMed

    Kleisner, Kristin M; Fogarty, Michael J; McGee, Sally; Barnett, Analie; Fratantoni, Paula; Greene, Jennifer; Hare, Jonathan A; Lucey, Sean M; McGuire, Christopher; Odell, Jay; Saba, Vincent S; Smith, Laurel; Weaver, Katherine J; Pinsky, Malin L

    2016-01-01

    Many studies illustrate variable patterns in individual species distribution shifts in response to changing temperature. However, an assemblage, a group of species that shares a common environmental niche, will likely exhibit similar responses to climate changes, and these community-level responses may have significant implications for ecosystem function. Therefore, we examine the relationship between observed shifts of species in assemblages and regional climate velocity (i.e., the rate and direction of change of temperature isotherms). The assemblages are defined in two sub-regions of the U.S. Northeast Shelf that have heterogeneous oceanography and bathymetry using four decades of bottom trawl survey data and we explore temporal changes in distribution, spatial range extent, thermal habitat area, and biomass, within assemblages. These sub-regional analyses allow the dissection of the relative roles of regional climate velocity and local physiography in shaping observed distribution shifts. We find that assemblages of species associated with shallower, warmer waters tend to shift west-southwest and to shallower waters over time, possibly towards cooler temperatures in the semi-enclosed Gulf of Maine, while species assemblages associated with relatively cooler and deeper waters shift deeper, but with little latitudinal change. Conversely, species assemblages associated with warmer and shallower water on the broad, shallow continental shelf from the Mid-Atlantic Bight to Georges Bank shift strongly northeast along latitudinal gradients with little change in depth. Shifts in depth among the southern species associated with deeper and cooler waters are more variable, although predominantly shifts are toward deeper waters. In addition, spatial expansion and contraction of species assemblages in each region corresponds to the area of suitable thermal habitat, but is inversely related to assemblage biomass. This suggests that assemblage distribution shifts in

  12. The Effects of Sub-Regional Climate Velocity on the Distribution and Spatial Extent of Marine Species Assemblages

    PubMed Central

    Kleisner, Kristin M.; Fogarty, Michael J.; McGee, Sally; Barnett, Analie; Fratantoni, Paula; Greene, Jennifer; Hare, Jonathan A.; Lucey, Sean M.; McGuire, Christopher; Odell, Jay; Saba, Vincent S.; Smith, Laurel; Weaver, Katherine J.; Pinsky, Malin L.

    2016-01-01

    Many studies illustrate variable patterns in individual species distribution shifts in response to changing temperature. However, an assemblage, a group of species that shares a common environmental niche, will likely exhibit similar responses to climate changes, and these community-level responses may have significant implications for ecosystem function. Therefore, we examine the relationship between observed shifts of species in assemblages and regional climate velocity (i.e., the rate and direction of change of temperature isotherms). The assemblages are defined in two sub-regions of the U.S. Northeast Shelf that have heterogeneous oceanography and bathymetry using four decades of bottom trawl survey data and we explore temporal changes in distribution, spatial range extent, thermal habitat area, and biomass, within assemblages. These sub-regional analyses allow the dissection of the relative roles of regional climate velocity and local physiography in shaping observed distribution shifts. We find that assemblages of species associated with shallower, warmer waters tend to shift west-southwest and to shallower waters over time, possibly towards cooler temperatures in the semi-enclosed Gulf of Maine, while species assemblages associated with relatively cooler and deeper waters shift deeper, but with little latitudinal change. Conversely, species assemblages associated with warmer and shallower water on the broad, shallow continental shelf from the Mid-Atlantic Bight to Georges Bank shift strongly northeast along latitudinal gradients with little change in depth. Shifts in depth among the southern species associated with deeper and cooler waters are more variable, although predominantly shifts are toward deeper waters. In addition, spatial expansion and contraction of species assemblages in each region corresponds to the area of suitable thermal habitat, but is inversely related to assemblage biomass. This suggests that assemblage distribution shifts in

  13. Determinism in fish assemblages of floodplain lakes of the vastly disturbed Mississippi Alluvial Valley

    USGS Publications Warehouse

    Miranda, L.E.; Lucas, G.M.

    2004-01-01

    The Mississippi Alluvial Valley between southern Illinois and southern Louisiana contains hundreds of floodplain lakes, most of which have been adversely affected by landscape modifications used to control flooding and support agriculture. We examined fish assemblages in lakes of this region to determine whether deterministic patterns developed in relation to prominent abiotic lake characteristics and to explore whether relevant abiotic factors could be linked to specific assemblage structuring mechanisms. The distributions of 14 taxa in 29 lakes were governed primarily by two gradients that contrasted assemblages in terms of lake area, lake elongation, and water clarity. The knowledge of whether a lake was clear or turbid, large or small, and long or short helped determine fish assemblage characteristics. Abiotic factors influenced fish assemblage structures, plausibly through limitations on foraging and physiological tolerances. Determinism in assemblage organization of floodplain lakes relative to recurrence in physicochemical features has been documented for unaltered rivers. Whereas the Mississippi Alluvial Valley has been subjected to vast anthropogenic disturbances and is not a fully functional floodplain river, fish assemblages in its floodplain lakes remain deterministic and organized by the underlying factors that also dictate assemblages in unaltered rivers. In advanced stages of lake aging, fish assemblages in these lakes are expected to largely include species that thrive in turbid, shallow systems with few predators and low oxygen concentrations. The observed patterns related to physical characteristics of these lakes suggest three general conservation foci, including (1) watershed management to control erosion, (2) removal of sediments or increases in water level to alleviate depth reductions and derived detriments to water physicochemistry, and (3) management of fish populations through stockings, removals, and harvest regulations.

  14. Clay mineral distribution and provenance in the Heuksan mud belt, Yellow Sea

    NASA Astrophysics Data System (ADS)

    Cho, Hyen Goo; Kim, Soon-Oh; Kwak, Kyeong Yoon; Choi, Hunsoo; Khim, Boo-Keun

    2015-12-01

    The Heuksan mud belt (HMB), located in the southeastern Yellow Sea, runs parallel to the southwest coast of Korea. In this study, the distribution and relative contribution of four major clay minerals are investigated using 101 surface sediment samples collected in the course of KIOST (2001, 2010, 2011) and KIGAM (2012) cruises, as well as 33 river sediment samples (four from the Huanghe River, three from the Changjiang River, and 26 from Korean rivers) in order to clarify the provenance of fine-grained sediments in the HMB. Based on this currently largest and most robust dataset available for interpretation, the clay mineral assemblages of the fine-grained sediments in the HMB are found to be on average composed of 64.7% illite, 17.9% chlorite, 11.4% kaolinite, and 5.9% smectite. Overall, the clay mineral assemblages are similar in both the northern and the southern parts of the HMB, although smectite seems to be relatively enriched in the southern part, whereas kaolinite is slightly more dominant in the northern part. This clearly indicates that the clays are mostly derived from Korean rivers and, in the southern part of the HMB, partly also from the Huanghe River in China. The new data thus confirm and strengthen the tentative interpretation of some earlier work based on a more limited dataset.

  15. A comparison of the influences of urbanization in contrasting environmental settings on stream benthic algal assemblages

    USGS Publications Warehouse

    Potapova, M.; Coles, J.F.; Giddings, E.M.P.; Zappia, H.

    2005-01-01

    Patterns of stream benthic algal assemblages along urbanization gradients were investigated in three metropolitan areas-Boston (BOS), Massachusetts; Birmingham (BIR), Alabama; and Salt Lake City (SLC), Utah. An index of urban intensity derived from socioeconomic, infrastructure, and land-use characteristics was used as a measure of urbanization. Of the various attributes of the algal assemblages, species composition changed along gradients of urban intensity in a more consistent manner than biomass or diversity. In urban streams, the relative abundance of pollution-tolerant species was often higher than in less affected streams. Shifts in assemblage composition were associated primarily with increased levels of conductivity, nutrients, and alterations in physical habitat. Water mineralization and nutrients were the most important determinants of assemblage composition in the BOS and SLC study areas; flow regime and grazers were key factors in the BIR study area. Species composition of algal assemblages differed significantly among geographic regions, and no particular algal taxa were found to be universal indicators of urbanization. Patterns in algal biomass and diversity along urban gradients varied among study areas, depending on local environmental conditions and habitat alteration. Biomass and diversity increased with urbanization in the BOS area, apparently because of increased nutrients, light, and flow stability in urban streams, which often are regulated by dams. Biomass and diversity decreased with urbanization in the BIR study area because of intensive fish grazing and less stable flow regime. In the SLC study area, correlations between algal biomass, diversity, and urban intensity were positive but weak. Thus, algal responses to urbanization differed considerably among the three study areas. We concluded that the wide range of responses of benthic algae to urbanization implied that tools for stream bioassessment must be region specific. ?? 2005 by the

  16. Fish assemblage responses to forest cover

    Treesearch

    Chris L. Burcher; Matthew E. McTammany; E. Fred Benfield; Gene S. Helfman

    2008-01-01

    We investigated whether fish assemblage structure in southern Appalachian streams differed with historical and contemporary forest cover. We compared fish assemblages in 2nd?4th order streams draining watersheds that had increased forest cover between 1950 and 1993 (i.e., reforesting watersheds).

  17. High-Pressure Minerals in Meteorites: Constraints on Shock Conditions and Duration

    NASA Technical Reports Server (NTRS)

    Sharp, Thomas G.

    2004-01-01

    The objective of this research was to better understand the conditions and duration of shock metamorphism in meteorites through microstructural and microanalytical characterization of high-pressure minerals. A) Continue to investigate the mineralogy and microstructures of melt-veins in a suite of chondritic samples ranging from shock grades S3 through S6 to determine how the mineral assemblages that crystallize at high-pressure and are related to shock grade. B) Investigate the chemical, mineralogical, and microstructural heterogeneities that occur across melt veins to interpret crystallization histories. C) Use static high-pressure experiments to simulate crystallization of melt veins for mineralogical and textural comparisons with the melt veins of naturally shocked samples. D) Characterize the compositions and defect microstructures of polycrystalline ringwoodite, wadsleyite, majorite, (Mg,Fe)Si03-ilmenite and (Mg,Fe)SiO3-perovskite in S6 samples to understand the mechanisms of phase transformations that occur during shock. These results will combined with kinetic data to constrain the time scales of kinetic processes. E) Investigate the transformations of metastable high-pressure minerals back to low- pressure forms to constrain post-shock temperatures and estimates of the peak shock pressure. Of these objectives, we have obtained publishable data on A, B and D. I am currently doing difficult high-pressure melting and quench experiments on an L chondrite known as Mbale. These experiments will provide additional constraints on the mineral assemblages that are produced during rapid quench of an L chondrite at pressures of 16 to 25 GPa. Results from published or nearly published research is presented below. Lists of theses, dissertations and publications are given below.

  18. Diagenesis of clay mineral assemblages in the Shikoku Basin: Inputs to the Nankai Trough megathrust and seismogenic zone

    NASA Astrophysics Data System (ADS)

    Underwood, M.; Guo, J.; Song, C.

    2012-12-01

    One of the essential components of the Nankai Trough Seismogenic Zone Experiment (NanTroSEIZE) is to document the composition and diagenetic alteration of sedimentary inputs to the subduction zone of SW Japan. Two sites were drilled seaward of the trench during IODP Expeditions 322 and 333 to demonstrate how those subduction inputs have been influenced by the basement topography of Shikoku Basin. Site C0011 was drilled on the NW flank of Kashinosaki Knoll, and Site C0012 is located near the seamount's summit. The lithostratigraphy expands and condenses from site to site, but the clay mineral assemblages are nearly identical when comparisons are made among coeval units. The early history of sedimentation (middle to late Miocene) was dominated by expandable clay minerals of the smectite group. Contents of smectite in strata older than 5.3 Ma typically exceed 65% of the clay-size fraction, and there are dozens of bentonite layers (altered volcanic ash) interbedded with the hemipelagic mudstones and turbidites. Those percentages amount to >45 wt-% smectite in the bulk mudstone. Volcanic sources for the Miocene clay probably included the ancestral Izu-Bonin island arc, the Izu-Honshu collision zone, and anomalous near-trench magma bodies in the Outer Zone of Honshu and Shikoku Island. As sedimentation progressed into the Pliocene and Pleistocene, mud supplies to the Shikoku Basin shifted increasingly to detrital illite and chlorite eroded from the uplifted accretionary complex (Outer Zone). At Site C0011, the younger hemipelagic-pyroclastic facies (upper Shikoku Basin) contains an average of 43% smectite, 36% illite, and 18% kaolinite + chlorite in the clay-size fraction. At Site C0012, comparable values are S = 51%, I = 32%, and K+C = 14%. XRD results show no evidence of smectite-to-illite diagenesis seaward of the trench, although it is important to note that Site C0011 was abandoned before reaching basaltic basement. We can predict the extent of smectite

  19. Comparative mineral mapping in the Colorado Mineral Belt using AVIRIS and ASTER remote sensing data

    USGS Publications Warehouse

    Rockwell, Barnaby W.

    2013-01-01

    This report presents results of interpretation of spectral remote sensing data covering the eastern Colorado Mineral Belt in central Colorado, USA, acquired by the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) and Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) sensors. This study was part of a multidisciplinary mapping and data integration project at the U.S. Geological Survey that focused on long-term resource planning by land-managing entities in Colorado. The map products were designed primarily for the regional mapping and characterization of exposed surface mineralogy, including that related to hydrothermal alteration and supergene weathering of pyritic rocks. Alteration type was modeled from identified minerals based on standard definitions of alteration mineral assemblages. Vegetation was identified using the ASTER data and subdivided based on per-pixel chlorophyll content (depth of 0.68 micrometer absorption band) and dryness (fit and depth of leaf biochemical absorptions in the shortwave infrared spectral region). The vegetation results can be used to estimate the abundance of fire fuels at the time of data acquisition (2002 and 2003). The AVIRIS- and ASTER-derived mineral mapping results can be readily compared using the toggleable layers in the GeoPDF file, and by using the provided GIS-ready raster datasets. The results relating to mineral occurrence and distribution were an important source of data for studies documenting the effects of mining and un-mined, altered rocks on aquatic ecosystems at the watershed level. These studies demonstrated a high correlation between metal concentrations in streams and the presence of hydrothermal alteration and (or) pyritic mine waste as determined by analysis of the map products presented herein. The mineral mapping results were also used to delineate permissive areas for various mineral deposit types.

  20. Magnetic Minerals in Soils and Paleosols as Recorders of Paleoclimate

    NASA Astrophysics Data System (ADS)

    Maxbauer, Daniel P.

    It is a fundamental challenge for geologists to create quantitative estimates of rainfall and temperature in past climates. Yet, records of past climates are integral for understanding the complexities of earth system dynamics. The research presented in this dissertation begins to establish a framework for reconstructing paleoclimates using the magnetic properties of fossilized soils. Magnetic minerals are ubiquitous in soils, and their composition, grain size, and concentration is often directly related to the ambient climatic conditions that were present during soil formation. Using rock magnetic methods, it is possible to sensitively characterize the magnetic mineral assemblages in natural materials - including soils and paleosols. The fundamentals of rock magnetism and many of the common methods used in rock magnetic applications are presented in chapter 2 and chapter 3, respectively. Chapter 4 reviews the physical, chemical, and biological factors that affect magnetic mineral assemblages in soils, the magnetic methods we use to characterize them, and the known relationships between magnetic minerals in soils and climate. A critical component to developing replicable tools for reconstructing paleoclimate is developing analytical and statistical tools that are accessible to the greater community. Chapter 5 introduces a new model, MAX UnMix, that was developed as an open-source, online tool for rock magnetic data processing that is designed to be user-friendly and accessible. Two case studies, on both fossil (Chapter 7) and modern (Chapter 6) soils, are presented and discuss many issues related to applying magnetic paleoprecipitation proxies in deep time. Chapter 7 discusses difficulties in disentangling the effects of pedogenesis, diagenesis, and recent surficial weathering in Paleocene-Eocene ( 56-55 Ma) paleosols. Chapter 6 explores the relative influence of soil forming factors (vegetation vs. climate) on controlling the pedogenic formation of magnetic

  1. Asteroid surface mineralogy: Evidence from earth-based telescope observations

    NASA Technical Reports Server (NTRS)

    Mccord, T. B.

    1978-01-01

    The interpretation of asteroid reflectance spectrophotometry in terms of mineralogical types gives inferred mineral assemblages for about 60 asteroids. Asteroid surface materials are compared with similar materials that make up many meteorites. The absence of asteroids with spectra that match identically the ordinary chondrites is noted.

  2. Phylogenetic community structure: temporal variation in fish assemblage

    PubMed Central

    Santorelli, Sergio; Magnusson, William; Ferreira, Efrem; Caramaschi, Erica; Zuanon, Jansen; Amadio, Sidnéia

    2014-01-01

    Hypotheses about phylogenetic relationships among species allow inferences about the mechanisms that affect species coexistence. Nevertheless, most studies assume that phylogenetic patterns identified are stable over time. We used data on monthly samples of fish from a single lake over 10 years to show that the structure in phylogenetic assemblages varies over time and conclusions depend heavily on the time scale investigated. The data set was organized in guild structures and temporal scales (grouped at three temporal scales). Phylogenetic distance was measured as the mean pairwise distances (MPD) and as mean nearest-neighbor distance (MNTD). Both distances were based on counts of nodes. We compared the observed values of MPD and MNTD with values that were generated randomly using null model independent swap. A serial runs test was used to assess the temporal independence of indices over time. The phylogenetic pattern in the whole assemblage and the functional groups varied widely over time. Conclusions about phylogenetic clustering or dispersion depended on the temporal scales. Conclusions about the frequency with which biotic processes and environmental filters affect the local assembly do not depend only on taxonomic grouping and spatial scales. While these analyzes allow the assertion that all proposed patterns apply to the fish assemblages in the floodplain, the assessment of the relative importance of these processes, and how they vary depending on the temporal scale and functional group studied, cannot be determined with the effort commonly used. It appears that, at least in the system that we studied, the assemblages are forming and breaking continuously, resulting in various phylogeny-related structures that makes summarizing difficult. PMID:25360256

  3. Structural and lithologic constraints to mineralization in Aurora, Nevada and Bodie, California mining districts, observed with aerospace geophysical data

    NASA Astrophysics Data System (ADS)

    Smailbegovic, Amer

    the Bodie Hills. The high-resolution, narrow-swath, hyperspectral data obtained from high and low altitude AVIRIS targeted on the individual districts, allows identification of hydrothermal alteration assemblages, potential structural mineralization conduits and surface manifestations of mineralization. Individual segments of the regional-to-local geophysical survey are field checked and spatially integrated using WofE. The interpretation and WofE modeling of the geophysical data and detailed geologic field mapping reveal a close relationship between the basement uplift (source for metals), NE-trending structures (conduits), volcanic activity (energy), hydrothermal activity (genesis) and mineralization in Aurora and Bodie. This study confirms that Aurora represents a low-sulfidation system hosted in a strike-slip influenced dilational vein system, which may be genetically associated with the initial phase of Miocene extension and stress accommodation in Western Great Basin during 15--8 Ma.

  4. Fish assemblages

    USGS Publications Warehouse

    McGarvey, Daniel J.; Falke, Jeffrey A.; Li, Hiram W.; Li, Judith; Hauer, F. Richard; Lamberti, G.A.

    2017-01-01

    Methods to sample fishes in stream ecosystems and to analyze the raw data, focusing primarily on assemblage-level (all fish species combined) analyses, are presented in this chapter. We begin with guidance on sample site selection, permitting for fish collection, and information-gathering steps to be completed prior to conducting fieldwork. Basic sampling methods (visual surveying, electrofishing, and seining) are presented with specific instructions for estimating population sizes via visual, capture-recapture, and depletion surveys, in addition to new guidance on environmental DNA (eDNA) methods. Steps to process fish specimens in the field including the use of anesthesia and preservation of whole specimens or tissue samples (for genetic or stable isotope analysis) are also presented. Data analysis methods include characterization of size-structure within populations, estimation of species richness and diversity, and application of fish functional traits. We conclude with three advanced topics in assemblage-level analysis: multidimensional scaling (MDS), ecological networks, and loop analysis.

  5. Demersal and larval fish assemblages in the Chukchi Sea

    NASA Astrophysics Data System (ADS)

    Norcross, Brenda L.; Holladay, Brenda A.; Busby, Morgan S.; Mier, Kathryn L.

    2010-01-01

    A multidisciplinary research cruise was conducted in the Chukchi Sea in summer 2004 during which we investigated assemblages of small demersal fishes and ichthyoplankton and the water masses associated with these assemblages. This study establishes a baseline of 30 demersal fish and 25 ichthyoplankton taxa in US and Russian waters of the Chukchi Sea. Presence/absence of small demersal fish clustered into four assemblages: Coastal Fishes, Western Chukchi Fishes, South Central Chukchi Fishes, and North Central Chukchi Fishes. Habitats occupied by small demersal fishes were characterized by sediment type, bottom salinity, and bottom temperature. Abundance of ichthyoplankton grouped into three assemblages with geographical extent similar to that of the bottom assemblages, except that there was a single assemblage for Central Chukchi Fishes. Water-column temperature and salinity characterized ichthyoplankton habitats. Three water masses, Alaska Coastal Water, Bering Sea Water, and Winter Water, were identified from both bottom and depth-averaged water-column temperature and salinity. A fourth water mass, Resident Chukchi Water, was identified only in the bottom water. The water mass and habitat characteristics with which demersal and larval fish assemblages were associated create a baseline to measure anticipated effects of climate change that are expected to be most severe at high latitudes. Monitoring fish assemblages could be a tool for assessing the effects of climate change. Climate-induced changes in distributions of species would result in a restructuring of fish assemblages in the Chukchi Sea.

  6. Environmental determinants of radiolarian assemblages in the western Pacific since the last deglaciation

    NASA Astrophysics Data System (ADS)

    Hernández-Almeida, I.; Cortese, G.; Yu, P.-S.; Chen, M.-T.; Kucera, M.

    2017-08-01

    Radiolarians are a very diverse microzooplanktonic group, often distributed in regionally restricted assemblages and responding to specific environmental factors. These properties of radiolarian assemblages make the group more conducive for the development and application of basin-wide ecological models. Here we use a new surface sediment data set from the western Pacific to demonstrate that ecological patterns derived from basin-wide open-ocean data sets cannot be transferred on semirestricted marginal seas. The data set consists of 160 surface sediment samples from three tropical-subtropical regions (East China Sea, South China Sea, and western Pacific), combining 54 new assemblage counts with taxonomically harmonized data from previous studies. Multivariate statistical analyses indicate that winter sea surface temperature at 10 m depth (SSTw) was the most significant environmental variable affecting the composition of radiolarian assemblages, allowing the development of an optimal calibration model (Locally Weighted-Weighted Averaging regression inverse deshrinking, R2cv = 0.88, root-mean-square error of prediction = 1.6°C). The dominant effect of SSTw on radiolarian assemblage composition in the western Pacific is attributed to the East Asian Winter Monsoon (EAWM), which is particularly strong in the marginal seas. To test the applicability of the calibration model on fossil radiolarian assemblages from the marginal seas, the calibration model was applied to two downcore records from the Okinawa Trough, covering the last 18 ka. We observe that these assemblages find most appropriate analogs among modern samples from the marginal basins (East China Sea and South China Sea). Downcore temperature reconstructions at both sites show similarities to known regional SST reconstructions, providing proof of concept for the new radiolarian-based SSTw calibration model.

  7. Assemblage organization in stream fishes: effects of environmental variation and interspecific interactions

    USGS Publications Warehouse

    Grossman, G.D.; Ratajczak, R.E.; Crawford, M. M.; Freeman, Mary C.

    1998-01-01

    We assessed the relative importance of environmental variation, interspecific competition for space, and predator abundance on assemblage structure and microhabitat use in a stream fish assemblage inhabiting Coweeta Creek, North Carolina, USA. Our study encompassed a ten year time span (1983-1992) and included some of the highest and lowest flows in the last 58 years. We collected 16 seasonal samples which included data on: 1) habitat availability (total and microhabitat) and microhabitat diversity, 2) assemblage structure (i.e., the number and abundances of species comprising a subset of the community), and 3) microhabitat use and overlap. We classified habitat availability data on the basis of year, season, and hydrologic period. Hydrologic period (i.e., pre-drought [PR], drought [D], and post-drought [PO]) represented the temporal location of a sample with respect to a four-year drought that occurred during the study. Hydrologic period explained a greater amount of variance in habitat availability data than either season or year. Total habitat availability was significantly greater during PO than in PR or D, although microhabitat diversity did not differ among either seasons or hydrologic periods. There were significantly fewer high-flow events (i.e., > 2.1 m3/s) during D than in either PR or PO periods. We observed a total of 16 species during our investigation, and the total number of species was significantly higher in D than in PR samples. Correlation analyses between the number of species present (total and abundant species) and environmental data yielded limited results, although the total number of species was inversely correlated with total habitat availability. A cluster analysis grouped assemblage structure samples by hydrologic period rather than season or year, supporting the contention that variation in annual flow had a strong impact on this assemblage. The drought had little effect on the numerical abundance of benthic species in this assemblage

  8. Megabenthic assemblages at the Hudson Canyon head (NW Atlantic margin): Habitat-faunal relationships

    NASA Astrophysics Data System (ADS)

    Pierdomenico, Martina; Gori, Andrea; Guida, Vincent G.; Gili, Josep-Maria

    2017-09-01

    The distribution of megabenthic communities at the head of Hudson Canyon and adjacent continental shelf was studied by means of underwater video transects and still photo imagery collected using a towed camera system. The goal was to explore the relationships between faunal distribution and physical seafloor conditions and to test the hypothesis that increased seafloor heterogeneity in the Hudson Canyon supports a larger diversity of benthic communities, compared with the adjacent continental shelf. Hierarchical cluster analysis was performed to identify benthic assemblages as defined in imagery. The BIO-ENV procedure and the Canonical Correspondence Analysis were carried out to elucidate species groupings in relation to terrain variables extracted from bathymetric data. Species accumulation curves were generated to evaluate species turn over in and out of Hudson Canyon. The results indicate that seafloor morphology is the main physical factor related to benthic community composition and distribution. Assemblages dominated by sponges, zoanthids and cup corals colonized the canyon margins and flanks, and were associated with coarse-grained sediments, while sea pen assemblages were observed along muddy seafloor within the thalweg. An assemblage dominated by sea stars occurred on the shelf, associated with a sandy seafloor. Some assemblages were exclusively observed in the canyon area, suggesting that the increased variability of seafloor composition, together with the oceanographic processes specific to the canyon area, enhance beta diversity. The colonization by benthic suspension feeders within the canyon, in contrast to shelf assemblages, mainly composed of carnivores and detritus feeders could be favored the intense hydrodynamics at the canyon head that increase the availability of suspended organic matter. From the perspective of management and conservation of marine resources, the results obtained support the relevance of Hudson Canyon as a biodiversity hotspot

  9. Dissecting the multi-scale spatial relationship of earthworm assemblages with soil environmental variability.

    PubMed

    Jiménez, Juan J; Decaëns, Thibaud; Lavelle, Patrick; Rossi, Jean-Pierre

    2014-12-05

    Studying the drivers and determinants of species, population and community spatial patterns is central to ecology. The observed structure of community assemblages is the result of deterministic abiotic (environmental constraints) and biotic factors (positive and negative species interactions), as well as stochastic colonization events (historical contingency). We analyzed the role of multi-scale spatial component of soil environmental variability in structuring earthworm assemblages in a gallery forest from the Colombian "Llanos". We aimed to disentangle the spatial scales at which species assemblages are structured and determine whether these scales matched those expressed by soil environmental variables. We also tested the hypothesis of the "single tree effect" by exploring the spatial relationships between root-related variables and soil nutrient and physical variables in structuring earthworm assemblages. Multivariate ordination techniques and spatially explicit tools were used, namely cross-correlograms, Principal Coordinates of Neighbor Matrices (PCNM) and variation partitioning analyses. The relationship between the spatial organization of earthworm assemblages and soil environmental parameters revealed explicitly multi-scale responses. The soil environmental variables that explained nested population structures across the multi-spatial scale gradient differed for earthworms and assemblages at the very-fine- (<10 m) to medium-scale (10-20 m). The root traits were correlated with areas of high soil nutrient contents at a depth of 0-5 cm. Information on the scales of PCNM variables was obtained using variogram modeling. Based on the size of the plot, the PCNM variables were arbitrarily allocated to medium (>30 m), fine (10-20 m) and very fine scales (<10 m). Variation partitioning analysis revealed that the soil environmental variability explained from less than 1% to as much as 48% of the observed earthworm spatial variation. A large proportion of the

  10. Patterns of Spatial Variation of Assemblages Associated with Intertidal Rocky Shores: A Global Perspective

    PubMed Central

    Cruz-Motta, Juan José; Miloslavich, Patricia; Palomo, Gabriela; Iken, Katrin; Konar, Brenda; Pohle, Gerhard; Trott, Tom; Benedetti-Cecchi, Lisandro; Herrera, César; Hernández, Alejandra; Sardi, Adriana; Bueno, Andrea; Castillo, Julio; Klein, Eduardo; Guerra-Castro, Edlin; Gobin, Judith; Gómez, Diana Isabel; Riosmena-Rodríguez, Rafael; Mead, Angela; Bigatti, Gregorio; Knowlton, Ann; Shirayama, Yoshihisa

    2010-01-01

    Assemblages associated with intertidal rocky shores were examined for large scale distribution patterns with specific emphasis on identifying latitudinal trends of species richness and taxonomic distinctiveness. Seventy-two sites distributed around the globe were evaluated following the standardized sampling protocol of the Census of Marine Life NaGISA project (www.nagisa.coml.org). There were no clear patterns of standardized estimators of species richness along latitudinal gradients or among Large Marine Ecosystems (LMEs); however, a strong latitudinal gradient in taxonomic composition (i.e., proportion of different taxonomic groups in a given sample) was observed. Environmental variables related to natural influences were strongly related to the distribution patterns of the assemblages on the LME scale, particularly photoperiod, sea surface temperature (SST) and rainfall. In contrast, no environmental variables directly associated with human influences (with the exception of the inorganic pollution index) were related to assemblage patterns among LMEs. Correlations of the natural assemblages with either latitudinal gradients or environmental variables were equally strong suggesting that neither neutral models nor models based solely on environmental variables sufficiently explain spatial variation of these assemblages at a global scale. Despite the data shortcomings in this study (e.g., unbalanced sample distribution), we show the importance of generating biological global databases for the use in large-scale diversity comparisons of rocky intertidal assemblages to stimulate continued sampling and analyses. PMID:21179546

  11. Mineral Reactions Involving Sapphirine and Their Application for Characterization of Metamorphic Conditions

    NASA Astrophysics Data System (ADS)

    Podlesskii, K. K.

    2008-05-01

    Assemblages of sapphirine, once considered to be a rare mineral, have in recent years been recognized as important indicators of high-temperature metamorphism. They occur in rocks that have undergone different tectono-metamorphic histories, with the P-T range of formation being estimated from below 700°C and 0.5 GPa to above 1100°C and 1.5 GPa. Sapphirine associated with quartz is attributed exclusively to the highest temperature conditions of crustal metamorphism referred to as ultrahigh-temperatiure metamorphism. Although experimental data involving sapphirine extend over an even wider P-T range, the quantitative interpretation of sapphirine-bearing assemblages remains ambiguous. Thermodynamic properties of magnesian sapphirine end-members have been optimized on the basis of experimentally constrained phase relations with the equation of state developed by Gerya et al., 2004. They differ from the model used in THERMOCALC (Kelsey et al., 2004), and the differences in the estimated stability of assemblages of sapphirine with quartz, kyanite and forsterite, to which a special attention have been paid due to their petrologic importance, look dramatic and may change interpretations of petrogenetic processes.

  12. Seasonal Dynamics of Fish Assemblages on Breakwaters and Natural Rocky Reefs in a Temperate Estuary: Consistent Assemblage Differences Driven by Sub-Adults

    PubMed Central

    Fowler, Ashley M.; Booth, David J.

    2013-01-01

    Development of infrastructure around cities is rapidly increasing the amount of artificial substrate (termed artificial reef, ‘AR’) in coastal marine habitats. However, effects of ARs on marine communities remain unknown, because it is unclear whether ARs can maintain similar communities to natural reefs. We investigated whether well-established (> 30 years old) breakwaters could consistently approximate fish assemblages on interspersed rocky reefs in a temperate estuary over 6 consecutive seasons using regular visual surveys between June 2009 (winter) and November 2010 (spring). We examined whether assemblage differences between reef types were driven by differences in juvenile recruitment, or were related to differences in older life-stages. Assemblages on both reef types were dominated by juveniles (61% of individuals) and sub-adults (34% of individuals). Seasonal fluctuations in assemblage parameters (species richness, diversity, sub-adult abundance) were similar between reef types, and levels of species diversity and assemblage composition were generally comparable. However, abundance and species richness were consistently higher (1.9-7.6 and 1.3-2.6 times, respectively) on breakwaters. These assemblage differences could not be explained by differences in juvenile recruitment, with seasonal patterns of recruitment and juvenile species found to be similar between reef types. In contrast, abundances of sub-adults were consistently higher (1.1-12 times) at breakwaters, and assemblage differences appeared to be driven by this life-stage. Our results indicate that breakwaters in temperate estuaries are capable of supporting abundant and diverse fish assemblages with similar recruitment process to natural reefs. However, breakwaters may not approximate all aspects of natural assemblage structure, with differences maintained by a single-life stage in some cases. PMID:24086634

  13. Indicators: Fish Assemblage

    EPA Pesticide Factsheets

    Fish assemblage refers to the variety and abundance of fish species in a given waterbody. Fish are sensitive indicators of physical and chemical habitat degradation, environmental contamination, migration barriers, and overall ecosystem productivity.

  14. Granitoid-associated gold mineralization in Egypt: a case study from the Atalla mine

    NASA Astrophysics Data System (ADS)

    Zoheir, Basem; Deshesh, Fatma; Broman, Curt; Pitcairn, Iain; El-Metwally, Ahmed; Mashaal, Shabaan

    2018-06-01

    Gold-bearing sulfide-quartz veins cutting mainly through the Atalla monzogranite intrusion in the Eastern Desert of Egypt are controlled by subparallel NE-trending brittle shear zones. These veins are associated with pervasive sericite-altered, silicified, and ferruginated rocks. The hosting shear zones are presumed as high-order structures of the Najd-style faults in the Central Eastern Desert ( 615-585 Ma). Ore minerals include an early pyrite-arsenopyrite (±pyrrhotite) mineralization, partly replaced by a late pyrite-galena-sphalerite-chalcopyrite (±gold/electrum ± tetrahedrite ± hessite) assemblage. Gold occurs as small inclusions in pyrite and arsenopyrite, or more commonly as intergrowths with galena and sphalerite/tetrahedrite in microfractures. Arsenopyrite geothermometry suggests formation of the early Fe-As-sulfide mineralization at 380-340 °C, while conditions of deposition of the late base metal-gold assemblage are assumed to be below 300 °C. Rare hessite, electrum, and Bi-galena are associated with sphalerite and gold in the late assemblage. The early and late sulfide minerals show consistently a narrow range of δ34S ‰ (3.4-6.5) that overlaps with sulfur isotopic values in ophiolitic rocks. The Au-quartz veins are characterized by abundant CO2 and H2O ± CO2 ± NaCl inclusions, where three-dimensional clusters of inclusions show variable aqueous/carbonic proportions and broad range of total (bimodal) homogenization temperatures. Heterogeneous entrapment of immiscible fluids is interpreted to be caused by unmixing of an originally homogenous, low salinity ( 2 eq. mass % NaCl) aqueous-carbonic fluid, during transition from lithostatic to hydrostatic conditions. Gold deposition occurred generally under mesothermal conditions, i.e., 1.3 kbar and 280 °C, and continued during system cooling to < 200 °C and pressure decrease to 0.1 kbar. Based on the vein textures, sulfur isotope values, composition of ore fluids, and conditions of ore formation

  15. Coral reef fish assemblages along a disturbance gradient in the northern Persian Gulf: A seasonal perspective.

    PubMed

    Ghazilou, Amir; Shokri, Mohammad Reza; Gladstone, William

    2016-04-30

    Seasonal dynamics of coral reef fish assemblages were assessed along a gradient of potential anthropogenic disturbance in the Northern Persian Gulf. Overall, the attributes of coral reef fish assemblages showed seasonality at two different levels: seasonal changes irrespective of the magnitude of disturbance level (e.g. species richness), and seasonal changes in response to disturbance level (e.g. total abundance and assemblage composition). The examined parameters mostly belonged to the second group, but the interpretation of the relationship between patterns of seasonal changes and the disturbance level was not straightforward. The abundance of carnivorous fishes did not vary among seasons. SIMPER identified the family Nemipteridae as the major contributor to the observed spatiotemporal variations in the composition of coral reef fish assemblages in the study area. Copyright © 2015 Elsevier Ltd. All rights reserved.

  16. Coesite Assemblages in Deep Continental Lithosphere: Additional Evidence for a Protolith from Subduction of Oceanic Crust

    NASA Astrophysics Data System (ADS)

    Sobolev, N.

    2005-12-01

    Inclusions in diamonds (DIs) represent an important source of information about the composition of continental lithospheric mantle. The isolated coesite inclusions in two diamonds (Harris, 1968) and a full set of eclogitic minerals (coesite (Cs), garnet (Ga), omphacite Cpx)) in two Yakutian diamonds (Sobolev et al., 1976), followed by finds of Cs-eclogite xenoliths (Smyth and Hatton, 1977; Ponomarenko et al., 1977) testify to the importance of coesite as a constituent of eclogitic rocks in deep lithospheric environment. Since these earlier times, coesite has been documented in more than 250 natural diamonds from 25 localities worldwide. Some 40 xenoliths of Cs-eclogites were found both in South African and Yakutian kimberlites. However, >50% of DIs of coesite are related to only four (4) diamond localities, including Guaniamo, Venezuela (Sobolev et al., 1998, 2003), Argyle (Jaques et al., 1989; Sobolev et al., 1989), New South Wales, all Australia (Sobolev et al., 1984; Meyer et al., 1997), and North Yakutian alluvials (Sobolev et al., 1999). All described DIs with coesite are from a wide range of assemblages: websterites to kyanite eclogites; grospydites and calcsilicate assemblages, with a large range in Gt [3.7-28.7 wt.% CaO] and Cpx [ 0.9-8.8 wt.% Na2O] compositions. In spite of these occurrences in diamonds, to the present, no coesite has been detected within the assemblage of minerals making up some 400 diamondiferous-eclogite xenoliths; similarly, no diamonds have been found in any Cs-eclogite xenoliths. This apparent paradox may be caused by coesite alteration in the diamondiferous eclogites, whereas coesite eclogites may have formed only outside of the diamond stability field. Indeed, coesite eclogites (without diamonds) may occupy a shallower position within continental lithosphere compared with the normal E-type diamond source. This indicates a broadly basaltic chemistry of the deep eclogitic environment, additional evidence for a protolith from the

  17. Visible and near-infrared (0.4-2.5 μm) reflectance spectra of playa evaporite minerals

    USGS Publications Warehouse

    Crowley, James K.

    1991-01-01

    Visible and near-infrared (VNIR; 0.4–2.4 μm) reflectance spectra were recorded for 35 saline minerals that represent the wide range of mineral and brine chemical compositions found in playa evaporite settings. The spectra show that many of the saline minerals exhibit diagnostic near-infrared absorption bands, chiefly attributable to vibrations of hydrogen-bonded structural water molecules. VNIR reflectance spectra can be used to detect minor hydrate phases present in mixtures dominated by anhydrous halite or thenardite, and therefore will be useful in combination with X ray diffraction data for characterizing natural saline mineral assemblages. In addition, VNIR reflectance spectra are sensitive to differences in sample hydration state and should facilitate in situ studies of minerals that occur as fragile, transitory dehydration products in natural salt crusts. The use of spectral reflectance measurements in playa studies should aid in mapping evaporite mineral distributions and may provide insight into the geochemical and hydrological controls on playa mineral and brine development.

  18. Gradients in Catostomid assemblages along a reservoir cascade

    USGS Publications Warehouse

    Miranda, Leandro E.; Keretz, Kevin R.; Gilliland, Chelsea R.

    2017-01-01

    Serial impoundment of major rivers leads to alterations of natural flow dynamics and disrupts longitudinal connectivity. Catostomid fishes (suckers, family Catostomidae) are typically found in riverine or backwater habitats yet are able to persist in impounded river systems. To the detriment of conservation, there is limited information about distribution of catostomid fishes in impounded rivers. We examined the longitudinal distribution of catostomid fishes over 23 reservoirs of the Tennessee River reservoir cascade, encompassing approximately 1600 km. Our goal was to develop a basin-scale perspective to guide conservation efforts. Catostomid species composition and assemblage structure changed longitudinally along the reservoir cascade. Catostomid species biodiversity was greatest in reservoirs lower in the cascade. Assemblage composition shifted from dominance by spotted sucker Minytrema melanops and buffalos Ictiobus spp. in the lower reservoirs to carpsuckers Carpiodes spp. midway through the cascade and redhorses Moxostoma spp. in the upper reservoirs. Most species did not extend the length of the cascade, and some species were rare, found in low numbers and in few reservoirs. The observed gradients in catostomid assemblages suggest the need for basin-scale conservation measures focusing on three broad areas: (1) conservation and management of the up-lake riverine reaches of the lower reservoirs, (2) maintenance of the access to quality habitat in tributaries to the upper reservoirs and (3) reintroductions into currently unoccupied habitat within species' historic distributions

  19. Phylogenetic and functional diversity in large carnivore assemblages

    PubMed Central

    Dalerum, F.

    2013-01-01

    Large terrestrial carnivores are important ecological components and prominent flagship species, but are often extinction prone owing to a combination of biological traits and high levels of human persecution. This study combines phylogenetic and functional diversity evaluations of global and continental large carnivore assemblages to provide a framework for conservation prioritization both between and within assemblages. Species-rich assemblages of large carnivores simultaneously had high phylogenetic and functional diversity, but species contributions to phylogenetic and functional diversity components were not positively correlated. The results further provide ecological justification for the largest carnivore species as a focus for conservation action, and suggests that range contraction is a likely cause of diminishing carnivore ecosystem function. This study highlights that preserving species-rich carnivore assemblages will capture both high phylogenetic and functional diversity, but that prioritizing species within assemblages will involve trade-offs between optimizing contemporary ecosystem function versus the evolutionary potential for future ecosystem performance. PMID:23576787

  20. Two mineralization events in the Baiyinnuoer Zn-Pb deposit in Inner Mongolia, China: Evidence from field observations, S-Pb isotopic compositions and U-Pb zircon ages

    NASA Astrophysics Data System (ADS)

    Jiang, Si-Hong; Chen, Chun-Liang; Bagas, Leon; Liu, Yuan; Han, Ning; Kang, Huan; Wang, Ze-Hai

    2017-08-01

    The Xing-Mong Orogenic Belt (XMOB) is located in the eastern part of the Central Asian Orogenic Belt (CAOB) and has experienced multiple tectonic events. The Baiyinnuoer Pb-Zn deposit may be a rare case that documents two periods of mineralization in the tectonically complex XMOB. There are two types of Pb-Zn mineralization in the deposit: (1) skarn-type ore, hosted by the skarn in the contact zone between marble and granodiorite and within the marble and (2) vein-type ore, hosted by crystal tuff and feldspar porphyry. This study revealed that the host rocks, mineral assemblages, mineralization occurrences, S-Pb isotopes, and ages between the two types of ore are notably different. Zircon U-Pb dating indicates that the granodiorite was emplaced in the Early Triassic (244 ± 1 to 242 ± 1 Ma), the crystal tuff was deposited in the Early Cretaceous (140 ± 1 to 136 ± 1 Ma), and the feldspar porphyry was intruded in the Early Cretaceous (138 ± 2 to 136 ± 2 Ma). The first skarn mineralization occurred at ∼240 Ma and the second vein-type Pb-Zn mineralization took place between 136 and 129 Ma. Thus the Triassic orebodies were overprinted by Early Cretaceous mineralization. The sphalerite and galena from the skarn mineralization have higher δ34S values (-4.7 to +0.3‰) than the sphalerite, galena and aresenopyrite from the vein-type mineralization (-7.5 to -4.2‰), indicating different sulfur sources or ore-forming processes for the two types of mineralization. The Pb isotopic compositions of the two types of ore are very similar, suggesting similar lead sources. Geochemistry and Nd-Pb-Hf isotopic systematics of the igneous rocks in the region show that the Triassic granodiorite was generated from hybridization of mafic and felsic magmas due to strong crust-mantle interaction under the collisional setting that resulted following the closure of the Paleo-Asian Ocean and the collision of North China and Siberian cratons at the end of the Permian; while the

  1. Discordance between living and death assemblages as evidence for anthropogenic ecological change

    PubMed Central

    Kidwell, Susan M.

    2007-01-01

    Mismatches between the composition of a time-averaged death assemblage (dead remains sieved from the upper mixed-zone of the sedimentary column) and the local living community are typically attributed to natural postmortem processes. However, statistical analysis of 73 molluscan data sets from estuaries and lagoons reveals significantly poorer average “live-dead agreement” in settings of documented anthropogenic eutrophication (AE) than in areas where AE and other human impacts are negligible. Taxonomic similarity of paired live and dead species lists declines steadily among areas as a function of AE severity, and, for data sets comprising only adults, rank-order agreement in species abundance drops where AE is suspected. The observed live-dead differences in composition are consistent with eutrophication (anomalous abundance of seagrass-dwellers and/or scarcity of organic-loving species in the death assemblage), suggesting compositional inertia of death assemblages to recent environmental change. Molluscan data sets from open shelf settings (n = 34) also show higher average live-dead discordance in areas of AE. These results indicate that (i) live-dead discordance in surficial grab samples provides valuable evidence for strong anthropogenic modification of benthic communities, (ii) actualistic estimates of the ecological fidelity of molluscan death assemblages tend to be erroneously pessimistic when conducted in nonpristine settings, and (iii) based on their high fidelity in pristine study areas, death assemblages are a promising means of reconstructing otherwise elusive preimpact ecological baselines from sedimentary records. PMID:17965231

  2. Breeding bird assemblages associated with stages of forest succession in large river floodplains

    USGS Publications Warehouse

    Knutson, M.G.; McColl, L.E.; Suarez, S.A.

    2005-01-01

    Floodplain forests rival all other habitat types in bird density and diversity. However, major successional changes are predicted for floodplain forests along the Mississippi River in the coming decades; young forests may replace the existing mature silver maple (Acer saccharinum L.) forests in some areas. We wanted to assess how the breeding bird community might respond to these changes. We studied stands of young forests along the middle Mississippi River, comparing the breeding bird assemblages among three stages of forest succession: shrub/scrub, young cottonwood (Populus deltoides Marshall) and willow (Salix nigra Marshall) forests, and mature silver maple dominated forests. We recorded a total of 54 bird species; the most frequently observed species were the indigo bunting (Passerina cyanea), red-winged blackbird (Agelaius phoeniceus), and yellow-billed cuckoo (Coccyzus americanus). Bird species richness differed among the habitat types, with mature forests supporting the largest number of species and the most species of management concern. The shrub/scrub and mature forest bird assemblages were distinct and shared few species, but the young forests had no identifiable bird species assemblage, sharing species found in both of the other habitat types. The bird assemblages we observed in young forests may become more prevalent as aging floodplain forests are replaced with younger stages of forest succession. Under this scenario, we would expect a temporary local decrease in bird species richness and habitat for species of management concern.

  3. A century later: Long-term change of an inshore temperate marine fish assemblage

    NASA Astrophysics Data System (ADS)

    McHugh, Matthew; Sims, David W.; Partridge, Julian C.; Genner, Martin J.

    2011-02-01

    There is compelling evidence that European marine fish assemblages have undergone extensive changes in composition over the last century. However, our knowledge of which species have changed in abundance and body size distributions, and the reasons for these changes, is limited due to a paucity of historical data. Here we report a study of long-term change in a marine fish assemblage from the inshore waters of the Western English Channel, near Plymouth. We compiled data from historic trawls undertaken between 1913 and 1922, and resurveyed those sites in 2008 and 2009. Our results revealed highly significant temporal differences in assemblage composition, but the scale of change was not consistent among taxonomic groups. Dramatic changes were recorded within the elasmobranchs, characterised by a reduction in abundance of all skate (Rajiidae) species, apparent extirpation of the angel shark ( Squatina squatina), and large increases in the abundance of lesser-spotted catshark ( Scyliorhinus canicula). By contrast we observed less evidence of change among 'flatfishes' (Pleuronectiformes) or 'roundfishes' (other teleosts). Changes were also observed in length-frequency distributions, with a significant decline in the size distribution of elasmobranchs (excluding S. canicula), but no significant change in size distributions of either group of teleosts. These data provide further evidence that larger, slow-maturing species have undergone declines in UK waters over the last century, and form useful benchmarks for assessment of future changes in this coastal faunal assemblage.

  4. Chemistry of atmosphere-surface interactions on Venus and Mars

    NASA Astrophysics Data System (ADS)

    Fegley, Bruce, Jr.; Treiman, Allan H.

    Earth-based, earth-orbital, and spacecraft observational data are used in the present evaluation of Venus atmosphere-surface interactions to quantitatively characterize the reactions between C, H, S, Cl, F, and N gases and plausible surface minerals. Calculation results are used to predict stable minerals and mineral assemblages on the Venus surface, in order to ascertain which (if any) of the atmospheric gases are buffeted by mineral assemblages. Chemical equilibrium calculations using extant thermodynamic data on scapolite minerals predict that carbonate-bearing scapolite and sulfate meionite are unstable on the surface of Venus, while chloride-bearing scapolite is stable.

  5. Predicting the Mineral Composition of Dust Aerosols. Part 2; Model Evaluation and Identification of Key Processes with Observations

    NASA Technical Reports Server (NTRS)

    Perlwitz, J. P.; Garcia-Pando, C. Perez; Miller, R. L.

    2015-01-01

    A global compilation of nearly sixty measurement studies is used to evaluate two methods of simulating the mineral composition of dust aerosols in an Earth system model. Both methods are based upon a Mean Mineralogical Table (MMT) that relates the soil mineral fractions to a global atlas of arid soil type. The Soil Mineral Fraction (SMF) method assumes that the aerosol mineral fractions match the fractions of the soil. The MMT is based upon soil measurements after wet sieving, a process that destroys aggregates of soil particles that would have been emitted from the original, undisturbed soil. The second method approximately reconstructs the emitted aggregates. This model is referred to as the Aerosol Mineral Fraction (AMF) method because the mineral fractions of the aerosols differ from those of the wet-sieved parent soil, partly due to reaggregation. The AMF method remedies some of the deficiencies of the SMF method in comparison to observations. Only the AMF method exhibits phyllosilicate mass at silt sizes, where they are abundant according to observations. In addition, the AMF quartz fraction of silt particles is in better agreement with measured values, in contrast to the overestimated SMF fraction. Measurements at distinct clay and silt particle sizes are shown to be more useful for evaluation of the models, in contrast to the sum over all particles sizes that is susceptible to compensating errors, as illustrated by the SMF experiment. Model errors suggest that allocation of the emitted silt fraction of each mineral into the corresponding transported size categories is an important remaining source of uncertainty. Evaluation of both models and the MMT is hindered by the limited number of size-resolved measurements of mineral content that sparsely sample aerosols from the major dust sources. The importance of climate processes dependent upon aerosol mineral composition shows the need for global and routine mineral measurements.

  6. Microanalysis of vitrous char and associated polymers: reference and ancient assemblages

    NASA Astrophysics Data System (ADS)

    Allue, E.; Bonnamy, S.; Courty, M. M.; Gispert I Guirado, F.

    2012-12-01

    Formation of vitrous char that occur in ancient charcoal assemblages have remained unsolved. Laboratory experiments refuted vitrification to resulting from high temperature charring of green or resinous wood. This puzzling problem has been refreshed by showing the association to the charcoal and vitrous char of plastics that were originally supposed to only be produced by petroleum industry. Extraction of similar polymers within geological glassy products from cosmic airbursts has suggested impact processes to possibly forming the carbonaceous polymorphs. The pulverisation at the ground in the Angles village (French Eastern Pyrenees) following the 2011 August 2nd high altitude meteor explosion of exotic debris with vitrous char and polymers, just alike the puzzling ones of the geological and archaeological records, has provided potential reference materials. We present here their microanalysis by Environmental SEM with EDS, Raman micro-spectrometry and FTIR, XRD, TEM, ICP-MS and isotope analyses. The characterization helps elucidating how the carbonaceous polymorphs formed by transient heating and transient high pressure of atmospheric aerosols. Under TEM the vesicular, dense, vitrous char show high structural organization with a dense pattern of nano-sized graphitized domains, metals and mineral inclusions. The coupled Raman-ESEM has allowed identifying a complex pattern at micro scales of ordered "D" peak at 1320-1350 cm-1 and the graphitic, ordered peak at 1576-1590 cm-1, in association to amorphous and poorly graphitic ordered carbon. The later occurs within plant cells that have been extracted from the dense vitrous char by performing controlled combustion under nitrogen up to 1000°C. In contrast, the brittle, vesicular vitrous char and the polymers encountered at the rear of the pulverised airburst debris reveal to be formed of agglutinated micro spherules of amorphous carbon with rare crystallized carbon nano-domains and scattered mineral inclusions. They

  7. Application of gold compositional analyses to mineral exploration in the United States

    USGS Publications Warehouse

    Antweiler, J.C.; Campbell, W.L.

    1977-01-01

    Native gold is a mineral composed of Au, Ag and Cu in solid solution and it usually contains one or more trace metals as lattice impurities, as mineral inclusions, in grain boundaries or in surface coatings. Alloy proportions of Au, Ag and Cu, together with certain other elements, can be thought of as constituting a gold "signature". Gold is associated with a great variety of ore deposits and has characteristic signatures for each of several types of ore deposits. Signatures for gold derived from igneous-metamorphic, hypothermal, mesothermal and epithermal deposits reflect conditions of ore formation by their content of Ag, Cu and characteristic associated elements. At higher temperatures of ore formation, gold has low Ag and high Cu content, and Bi and Pb are the most abundant trace elements. But at lower temperatures of ore formation, Ag is high, Cu is low, and Pb is the most abundant trace element. The same trend in gold signatures is observable in gold mining districts, such as Central City, Colorado, where zoning as shown by mineral assemblages indicates ore deposition at progressively lower temperatures as the distance from a central high-temperature zone increases. The signatures of gold may be useful in searching for porphyry Cu deposits. Signatures from Butte (Montana), Mineral Park (Arizona) and Cala Abajo (Puerto Rico), on the basis of limited sampling, are similar and distinctive. They are characterized by a similar assemblage of trace elements and are relatively high in both Ag and Cu. Another application of gold compositional data is in tracing placer gold to its bedrock source. For example, the Ag content of placer gold in the Tarryall district of Colorado differed from that of nearly all of the bedrock sources of gold found by early prospectors. However, one lightly prospected area peripheral to the Tertiary quartz monzonite stock at Montgomery Gulch contains gold with a Ag content similar to that of the placer gold. This area is the most likely

  8. SIMULATING FISH ASSEMBLAGE DYNAMICS IN RIVER NETWORKS

    EPA Science Inventory

    My recently retired colleague, Joan Baker, and I have developed a prototype computer simulation model for studying the effects of human and non-human alterations of habitats and species availability on fish assemblage populations. The fish assemblage model, written in R, is a sp...

  9. Persistency-field Eh-pH diagrams for sulfides and their application to supergene oxidation and enrichment of sulfide ore bodies

    USGS Publications Warehouse

    Sato, M.

    1992-01-01

    At temperatures prevailing near the Earth's surface, metastable co-existence of chemical substances is common because chemical reactions that would directly lead to the attainment of thermody-namically most stable equilibria are often blocked by high activation energy barriers. The persistency of a metastable assemblage is then governed by alternative reaction paths that provide lower activation energy barriers. Comparison of observed mineral assemblages in the supergene oxidized and enriched sulfide ores with corresponding stability Eh-pH diagrams reveals that the supergene assemblages are mostly metastable due primarily to the persistency of sulfide minerals beyond stability boundaries. A new set of diagrams called persistency-field Eh-pH diagrams has been constructed for binary metal sulfides on the basis of electrochemical and other experimental data. Each diagram delineates the persistency field, which is a combined field of thermodynamic stability and reaction path-controlled metastability, for a specific sulfide mineral. When applied to the supergene assemblages, these new diagrams show much better correspondence to the field observations. Although there may still be room for further refinement, the new diagrams appear to provide a strong visual aid to the understanding of the behavior of sulfide minerals in the supergene conditions. ?? 1992.

  10. Fish composition and assemblage in the anthropogenic-modified tidally-restricted Doñana (Spain) marshlands

    NASA Astrophysics Data System (ADS)

    Moreno-Valcárcel, Raquel; Oliva-Paterna, Francisco J.; Arribas, Carmen; Fernández-Delgado, Carlos

    2013-03-01

    The Guadalquivir estuary is the largest estuarine area on the southern Atlantic coast of Europe; its anthropogenic tidally-restricted marshes are partly within the boundary of the Doñana National Park, southern Spain. Our two-year study describes the spatial and temporal patterns of the fish assemblages in the Doñana marshlands in terms of species richness, abundance and biomass. The main families were Mugilidae and Cyprinidae, which accounted for 40.9% of the total species richness. Unlike the fish assemblages found in other European estuaries, Doñana was dominated in both biomass and abundance by freshwater species, mainly invasive exotic species. The spatial analysis of the assemblage showed four significant fish groups corresponding to different habitats established a priori and related to the salinity gradient. Assemblages did not show a seasonal pattern and the temporal fish groups observed were mainly related to the hydrological cycle and the extreme drought that occurred during the study period.

  11. Origin of primary PGM assemblage in сhromitite from a mantle tectonite at Harold's Grave (Shetland Ophiolite Complex, Scotland)

    NASA Astrophysics Data System (ADS)

    Badanina, Inna Yu.; Malitch, Kreshimir N.; Lord, Richard A.; Meisel, Thomas C.

    2013-12-01

    In this paper we present textural and mineral chemistry data for a PGM inclusion assemblage and whole-rock platinum-group element (PGE) concentrations of chromitite from Harold's Grave, which occurrs in a dunite pod in a mantle tectonite at Unst in the Shetland Ophiolite Complex (SOC), Scotland. The study utilized a number of analytical techniques, including acid digestion and isotope dilution (ID) ICP-MS, hydroseparation and electron microprobe analysis. The chromitite contains a pronounced enrichment of refractory PGE (IPGE: Os, Ir and Ru) over less refractory PGE (PPGE: Rh, Pt and Pd), typical of mantle hosted `ophiolitic' chromitites. A `primary' magmatic PGM assemblage is represented by euhedrally shaped (up to 60 μm in size) single and composite inclusions in chromite. Polyphase PGM grains are dominated by laurite and osmian iridium, with subordinate laurite + osmian iridium + iridian osmium and rare laurite + Ir-Rh alloy + Rh-rich sulphide (possibly prassoite). The compositional variability of associated laurite and Os-rich alloys at Harold's Grave fit the predicted compositions of experiment W-1200-0.37 of Andrews and Brenan (Can Mineral 40: 1705-1716, 2002) providing unequivocal information on conditions of their genesis, with the upper thermal stability of laurite in equilibrium with Os-rich alloys estimated at 1200-1250 °C and f(S2) of 10-0.39-10-0.07.

  12. Vesicle-metal-sulfide assemblages from the Chelyabinsk meteorite

    NASA Astrophysics Data System (ADS)

    Andronikov, A.; Lauretta, D.; Hill, D.; Andronikova, I.

    2014-07-01

    On February 15, 2013, an ET object entered the Earth's atmosphere over the Russian city of Chelyabinsk. It entered at a preatmospheric velocity of 18.6 km/sec at the angle of 17--20°. The bolide responsible for this event was estimated to be 17-20 m in diameter and had a mass of ˜10 Ktons; the ensuing airburst occurred at an altitude >20 km and released a total energy of ˜440 kT [1,2]. The Chelyabinsk meteorite is an equilibrated LL5 ordinary chondrite, shock stage S4, and weathering grade WG0 similar to other LL5 falls [1,2]. Our studied sample is an impact melt breccia consisting of shock-darkened chondrite clasts (SDC) and vesicular impact melt lithology (IML). The SDC have recrystallized textures and contain barred- and porphyritic-olivine, porphyritic-olivine-pyroxene and radial-pyroxene chondrules in the intrachondrule matrix. A dense network of thin fractures in the SDC is filled up with opaque minerals [cf. 3]. Metals in the SDC are kamacite (4.7--8.5 % Ni), taenite (21.4--33.5 % Ni), and martensite (14.5--18.6 % Ni). The IML consists mostly of tiny (<10 microns) silicate grains surrounded by patches of glass. The IML is characterized by the presence of multiple vesicles (up to 1 mm) in silicate matrix. The vesicles are often filled up with sulfide-metal assemblages or only with sulfide. Metals in the IML are martensite (12.9--18.4 % Ni) and taenite (19.3--47.3 % Ni). Sulfides from both SDC and IML are Ni-bearing troilite (62.2--64.2 % Fe; 35.2--37.2 % S; 3000--5000 ppm Ni), with rare pentlandite (41.2--48.6 % Fe, 33.2--34.3 % S, 19.4--23.9 % Ni). The presence of abundant vesicles in the IML indicates strong heating and volatilization. Since no other phase except for sulfide-metal assemblages were observed to fill up vesicles, the likely source of volatiles is S vapor formed by vaporization of FeS during impact melting [cf. 4]. Molten metal and sulfide coalesced into droplets of metal-sulfide liquids forming eventually sulfide-metal assemblages. A

  13. Variability of intertidal foraminferal assemblages in a salt marsh, Oregon, USA

    USGS Publications Warehouse

    Milker, Yvonne; Horton, Benjamin P.; Nelson, Alan R.; Engelhart, Simon E.; Witter, Robert C.

    2015-01-01

    We studied 18 sampling stations along a transect to investigate the similarity between live (rose Bengal stained) foraminiferal populations and dead assemblages, their small-scale spatial variations and the distribution of infaunal foraminifera in a salt marsh (Toms Creek marsh) at the upper end of the South Slough arm of the Coos Bay estuary, Oregon, USA. We aimed to test to what extent taphonomic processes, small-scale variability and infaunal distribution influence the accuracy of sea-level reconstructions based on intertidal foraminifera. Cluster analyses have shown that dead assemblages occur in distinct zones with respect to elevation, a prerequisite for using foraminifera as sea-level indicators. Our nonparametric multivariate analysis of variance showed that small-scale spatial variability has only a small influence on live (rose Bengal stained) populations and dead assemblages. The dissimilarity was higher, however, between live (rose Bengal stained) populations in the middle marsh. We observed early diagenetic dissolution of calcareous tests in the dead assemblages. If comparable post-depositional processes and similar minor spatial variability also characterize fossil assemblages, then dead assemblage are the best modern analogs for paleoenvironmental reconstructions. The Toms Creek tidal flat and low marsh vascular plant zones are dominated by Miliammina fusca, the middle marsh is dominated by Balticammina pseudomacrescens and Trochammina inflata, and the high marsh and upland–marsh transition zone are dominated by Trochamminita irregularis. Analysis of infaunal foraminifera showed that most living specimens are found in the surface sediments and the majority of live (rose Bengal stained) infaunal specimens are restricted to the upper 10 cm, but living individuals are found to depths of 50 cm. The dominant infaunal specimens are similar to those in the corresponding surface samples and no species have been found living solely infaunally. The

  14. Biological Control on Mineral Transformation in Soils ?

    NASA Astrophysics Data System (ADS)

    Ziegler, K.; Hsieh, J. C.; Chadwick, O. A.; Kelly, E. F.

    2001-12-01

    Weathering of primary minerals is commonly linked to biological processes through the production of carbonic and organic acids. Plants can also play a role in weathering by removing soluble constituents and enhancing diffusion gradients within the soil. Here we investigate the synthesis of secondary minerals and the role of plants in removing elements that act as building blocks for these minerals. In order to minimize losses from leaching, we have sampled a chronosequence of soils forming on lava flows on Hawaii Island that receive about 200 mm of rain annually and have never been subjected to high levels of rainfall. The P concentration in the soils drops from almost 3000 mg/kg on a 1.5 ky lava flow to around 1000 mg/kg on a 350 ky lava flow. This loss of P can only be ascribed to P-uptake by plants with subsequent removal through the loss of above ground biomass through fire and/or wind removal. Over the same time frame the amount of plagioclase in the soils drops from around 22% of the <2 mm soil fraction on the youngest lava flow to virtually 0% on the 350 ky flow, suggesting a substantial release of Si. Elevated silicon in arid, basaltic soil environments often leads to formation of smectite, a feature not observed along the chronosequence. In fact, plagioclase is replaced by the kaolin mineral halloysite with allophane as an apparent precursor. Kaolin minerals are associated with moderate to intense leaching environments rather than the mild leaching conditions that influence these soils. We selected an intermediate age soil profile (170 ky lava flow) to conduct an in-depth investigation of the soil mineral composition. We detected a strong dominance of halloysite, the presence of gibbsite, but no smectite. Secondary halloysite formation is preferred over smectite formation when Si activities are relatively low, and the pH is acidic rather than alkaline. Although this mineral assemblage seems to imply formation under a wetter climatic regime, the oxygen

  15. Using ASD data to identify the altered minerals for exploring of gold deposit in the Beishan area, North China

    NASA Astrophysics Data System (ADS)

    Ren, G. L.; Yi, H.; Yang, M.; Liang, N.; Li, J. Q.; Yang, J. L.

    2016-11-01

    Hyperspectral information of altered minerals plays an important role in the identifications of mineralized zones. In this study, the altered minerals of two gold deposits from Fangshankou-Laojinchang regions of Beishan metallogenic belt were measured by ASD field Spectrometer. Many gold deposits would have a close relationship with Variscan magma intrusion, which have been found in study region. The alteration minerals have been divided six types by the spectral results, i.e. sericite, limonite, dolomite, chlorite, epidote and calcite. The distribution characteristics and formations of altered minerals were discussed here. By the ASD, the spectral curve of different geological units in the Jintanzi and Fangshankou gold deposits were analysed and summarized. The results show that the sericite and limonite are mainly related with the gold mineralization and widely occurred in the gold deposits. Therefore, we proposed that the sericite and limonite are the iconic alteration mineral assemblages for gold mineralization and the models of altered minerals for gold deposits could be established in this region.

  16. Carbonate Mineral Assemblages as Inclusions in Yakutian Diamonds: TEM Verifications

    NASA Astrophysics Data System (ADS)

    Logvinova, A. M.; Wirth, R.; Sobolev, N. V.; Taylor, L. A.

    2014-12-01

    Carbonate mineral inclusions are quite rare in diamonds from the upper mantle, but are evidence for a carbonate abundance in the mantle. It is believed that such carbonatitic inclusions originated from high-density fluids (HDFs) that were enclosed in diamond during its growth. Using TEM and EPMA, several kinds of carbonate inclusions have been identified in Yakutian diamonds : aragonite, dolomite, magnesite, Ba-, Sr-, and Fe-rich carbonates. Most of them are represented by multi-phase inclusions of various chemically distinct carbonates, rich in Ca, Mg, and K and associated with minor amounts of silicate, oxide, saline, and volatile phases. Volatiles, leaving some porosity, played a significant role in the diamond growth. A single crystal of aragonite (60μm) is herein reported for the first time. This inclusion is located in the center of a diamond from the Komsomolskaya pipe. Careful CL imaging reveals the total absence of cracks around the aragonite inclusion - i.e., closed system. This inclusion has been identified by X-ray diffraction and microprobe analysis. At temperatures above 1000 0C, aragonite is only stable at high pressures of 5-6 GPa. Inside this aragonite, we observed nanocrystalline inclusions of titanite, Ni-rich sulfide, magnetite, water-bearing Mg-silicate, and fluid bubbles. Dolomite is common in carbonate multi-phase inclusions in diamonds from the Internatsionalnaya, Yubileinaya, and Udachnaya kimberlite pipes. Alluvial diamonds of the northeastern Siberian Platform are divided into two groups based on the composition of HDFs: 1) Mg-rich multi-phase inclusions (60% magnesite + dolomite + Fe-spinel + Ti-silicate + fluid bubbles); and 2) Ca-rich multi-phase inclusions (Ca,Ba-, Ca,Sr-, Ca,Fe-carbonates + Ti-silicate + Ba-apatite + fluid bubbles). High-density fluids also contain K. Volatiles in the fluid bubbles are represented by water, Cl, F, S, CO2, CH4, and heavy hydrocarbons. Origin of the second group of HDFs may be related to the non

  17. Light-Dependant Biostabilisation of Sediments by Stromatolite Assemblages

    PubMed Central

    Paterson, David M.; Aspden, Rebecca J.; Visscher, Pieter T.; Consalvey, Mireille; Andres, Miriam S.; Decho, Alan W.; Stolz, John; Reid, R. Pamela

    2008-01-01

    For the first time we have investigated the natural ecosystem engineering capacity of stromatolitic microbial assemblages. Stromatolites are laminated sedimentary structures formed by microbial activity and are considered to have dominated the shallows of the Precambrian oceans. Their fossilised remains are the most ancient unambiguous record of early life on earth. Stromatolites can therefore be considered as the first recognisable ecosystems on the planet. However, while many discussions have taken place over their structure and form, we have very little information on their functional ecology and how such assemblages persisted despite strong eternal forcing from wind and waves. The capture and binding of sediment is clearly a critical feature for the formation and persistence of stromatolite assemblages. Here, we investigated the ecosystem engineering capacity of stromatolitic microbial assemblages with respect to their ability to stabilise sediment using material from one of the few remaining living stromatolite systems (Highborne Cay, Bahamas). It was shown that the most effective assemblages could produce a rapid (12–24 h) and significant increase in sediment stability that continued in a linear fashion over the period of the experimentation (228 h). Importantly, it was also found that light was required for the assemblages to produce this stabilisation effect and that removal of assemblage into darkness could lead to a partial reversal of the stabilisation. This was attributed to the breakdown of extracellular polymeric substances under anaerobic conditions. These data were supported by microelectrode profiling of oxygen and calcium. The structure of the assemblages as they formed was visualised by low-temperature scanning electron microscopy and confocal laser microscopy. These results have implications for the understanding of early stromatolite development and highlight the potential importance of the evolution of photosynthesis in the mat forming

  18. Light-dependant biostabilisation of sediments by stromatolite assemblages.

    PubMed

    Paterson, David M; Aspden, Rebecca J; Visscher, Pieter T; Consalvey, Mireille; Andres, Miriam S; Decho, Alan W; Stolz, John; Reid, R Pamela

    2008-09-10

    For the first time we have investigated the natural ecosystem engineering capacity of stromatolitic microbial assemblages. Stromatolites are laminated sedimentary structures formed by microbial activity and are considered to have dominated the shallows of the Precambrian oceans. Their fossilised remains are the most ancient unambiguous record of early life on earth. Stromatolites can therefore be considered as the first recognisable ecosystems on the planet. However, while many discussions have taken place over their structure and form, we have very little information on their functional ecology and how such assemblages persisted despite strong eternal forcing from wind and waves. The capture and binding of sediment is clearly a critical feature for the formation and persistence of stromatolite assemblages. Here, we investigated the ecosystem engineering capacity of stromatolitic microbial assemblages with respect to their ability to stabilise sediment using material from one of the few remaining living stromatolite systems (Highborne Cay, Bahamas). It was shown that the most effective assemblages could produce a rapid (12-24 h) and significant increase in sediment stability that continued in a linear fashion over the period of the experimentation (228 h). Importantly, it was also found that light was required for the assemblages to produce this stabilisation effect and that removal of assemblage into darkness could lead to a partial reversal of the stabilisation. This was attributed to the breakdown of extracellular polymeric substances under anaerobic conditions. These data were supported by microelectrode profiling of oxygen and calcium. The structure of the assemblages as they formed was visualised by low-temperature scanning electron microscopy and confocal laser microscopy. These results have implications for the understanding of early stromatolite development and highlight the potential importance of the evolution of photosynthesis in the mat forming process

  19. Spatial-temporal and genetic relationships between gold and antimony mineralization at gold-sulfide deposits of the Ob-Zaisan folded zone

    NASA Astrophysics Data System (ADS)

    Kalinin, Yu. A.; Naumov, E. A.; Borisenko, A. S.; Kovalev, K. R.; Antropova, A. I.

    2015-05-01

    The Ob-Zaisan folded zone is a fragment of a single structure composed of Paleozoic sedimentary and volcanogenic rocks (mainly black shale), which was formed at the margin of the Siberian continent and features a common set of magmatic complexes and mineral systems. However, there are some differences that determine the specific geological and metallogenic features of the Irtysh-Zaisan and Kolyvan-Tomsk fragments of the Ob-Zaisan folded zone. In the gold deposits of the West Kalba and Kolyvan-Tomsk auriferous belt, the main gold-sulfide mineralization is controlled by zones of shearing and dynamic metamorphism in carbonaceous carbonate-terrigenous rocks. This type of mineralization was formed in tectonic blocks in a compressional setting. Antimony mineralization is characterized by brecciated textures and the vein-like morphology of ore bodies, reflecting extensional tectonics. At some deposits (Zherek, Mirazh, Dalny), Sb mineralization is spatially separated from the main gold-sulfide ores and shows cross-cutting relations to the principal ore-controlling structures. In other gold deposits, stibnite is spatially associated with disseminated gold-sulfide ores and forms mineral assemblages with Ni, Co, Au, Pb, and Fe (Alimbet, Zhanan, Legostaevskoe, Semiluzhenskoe, and Kamenskoe deposits). This study reveals no direct correlation between Au and Sb in gold-sulfide ores of these deposits. SEM analysis indicated the absence of free gold in stibnite veins. However, atomic absorption and electron microprobe analysis indicated the presence of "invisible gold" from a few ppm to several tens of ppm in the stibnite. High gold contents in the gold-sulfide ores overprinted by antimony mineralization (Suzdalskoe, Zhanan, and Legostaevskoe deposits) can be explained by the processes of regeneration and redeposition. The results of microstructural observations, isotope geochronology, studies of mineral assemblages and fluid inclusions in the ores from gold deposits of the Ob

  20. Direct Observation of Asphaltene Nanoparticles on Model Mineral Substrates.

    PubMed

    Raj, Gijo; Lesimple, Alain; Whelan, Jamie; Naumov, Panče

    2017-06-27

    The propensity for adherence to solid surfaces of asphaltenes, a complex solubility class of heteropolycyclic aromatic compounds from the heavy fraction of crude oil, has long been the root cause of scale deposition and remains an intractable problem in the petroleum industry. Although the adhesion is essential to understanding the process of asphaltene deposition, the relationship between the conformation of asphaltene molecules on mineral substrates and its impact on adhesion and mechanical properties of the deposits is not completely understood. To rationalize the primary processes in the process of organic scale deposition, here we use atomic force microscopy (AFM) to visualize the morphology of petroleum asphaltenes deposited on model mineral substrates. High imaging contrast was achieved by the differential adhesion of the tip between asphaltenes and the mineral substrate. While asphaltenes form smooth continuous films on all substrates at higher concentrations, they deposit as individual nanoparticles at lower concentrations. The size, shape, and spatial distribution of the nanoaggregates are strongly affected by the nature of the substrate; while uniformly distributed spherical particles are formed on highly polar and hydrophilic substrates (mica), irregular islands and thicker patches are observed with substrates of lower polarity (silica and calcite). Asphaltene nanoparticles flatten when adsorbed on highly oriented pyrolytic graphite due to π-π interactions with the polycyclic core. Force-distance profiles provide direct evidence of the conformational changes of asphaltene molecules on hydrophilic/hydrophobic substrates that result in dramatic changes in adhesion and mechanical properties of asphaltene deposits. Such an understanding of the nature of adhesion and mechanical properties tuned by surface properties, on the level of asphaltene nanoaggregates, would contribute to the design of efficient asphaltene inhibitors for preventing asphaltene

  1. Megabenthic assemblages in the continental shelf edge and upper slope of the Menorca Channel, Western Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Grinyó, Jordi; Gori, Andrea; Greenacre, Michael; Requena, Susana; Canepa, Antonio; Lo Iacono, Claudio; Ambroso, Stefano; Purroy, Ariadna; Gili, Josep-Maria

    2018-03-01

    Highly diverse megabenthic assemblages dominated by passive and active suspension feeders have been recently reported in shelf edge environments of the Mediterranean Sea. Due to their frequent association with species of commercial interest, these assemblages have been heavily impacted by fishing. The vulnerability and low resilience of these assemblages, composed mainly by long-living and slow-growing species, have motivated the implementation of management measures such as the restriction of bottom trawling, and the establishment of large protected areas embracing these environments. The Menorca Channel is one of such areas recently included in the European Union Natura 2000 network. Quantitative analysis of video transects recorded at 95-360 m depth by manned submersible and remotely operated vehicles were used to characterize megabenthic assemblages and to assess their geographical and bathymetric distribution. Six different assemblages were identified, mainly segregated by substrate type and depth. Hard substrates hosted coral gardens and sponge grounds, whereas soft sediments were mainly characterized by large extensions of the crinoid Leptometra phalangium and the brachiopod Gryphus vitreus. The good preservation of most of the observed assemblages is probably related to a low bottom trawling pressure, which mainly concentrates deeper on the adjacent continental slope. Because of their biological and ecological value, management and conservation measures need to be established to preserve these benthic assemblages.

  2. The Challenges of Observing Geologically: Third Graders' Descriptions of Rock and Mineral Properties

    ERIC Educational Resources Information Center

    Ford, Danielle J.

    2005-01-01

    The understandings of properties that children develop in the context of rock and mineral identification point to the challenges of observing in a manner authentic to the discipline of geology. The notebook entries of 34 third graders written during the enactment of a commercial unit on earth materials were investigated for their descriptions of…

  3. Partitioning of Cu between mafic minerals, Fe-Ti oxides and intermediate to felsic melts

    NASA Astrophysics Data System (ADS)

    Liu, Xingcheng; Xiong, Xiaolin; Audétat, Andreas; Li, Yuan

    2015-02-01

    This study used improved capsule technique i.e., Pt95Cu05 or Au95Cu05 alloy capsules as Cu sources to determine Cu partitioning between mafic minerals, Fe-Ti oxides and intermediate to felsic melts at 0.5-2.5 GPa, 950-1100 °C and various oxygen fugacities (fO2). In combination with the data from the mafic composition systems, the results demonstrate that Cu is generally highly incompatible in mafic minerals and moderately incompatible to compatible in Fe-Ti oxides. The general order of mineral/melt Cu partition coefficients (DCu) is garnet (0.01-0.06) ⩽ olivine (0.04-0.20) ≈ opx (0.04-0.24) ≈ amphibole (0.04-0.20) ⩽ cpx (0.04-0.45) ⩽ magnetite, titanomagnetite and Cr-spinel (0.18-1.83). The variations in DCu depend mainly on temperature, fO2 or mineral composition. In general, DCu for olivine (and perhaps opx) increases with decreasing temperature and increasing fO2. DCu increases for cpx with Na+ (pfu) in cpx, for magnetite and Cr-spinel with Fe3+ (pfu) in these phases and for titanomagnetite with Ti4+ (pfu) in this phase. The large number of DCu data (99 pairs) serves as a foundation for quantitatively understanding the behavior of Cu during magmatic processes. The generation of intermediate to felsic magmas via fractional crystallization or partial melting of mafic rocks (magmas) at deep levels of crust involves removal of or leaving assemblages of mafic minerals + Fe-Ti oxides ± sulfides. With our DCu data on mafic minerals and Fe-Ti oxides, DCubulk values around 0.2 were obtained for the sulfide-free assemblages. Cu will thus be concentrated efficiently in the derived melts during these two processes if sulfides are absent or negligible, explaining that high fO2 and sulfide-destabilization are favorable to formation of the porphyry Cu system.

  4. Variability of lotic macroinvertebrate assemblages and stream habitat characteristics across hierarchical landscape classifications.

    PubMed

    Mykrä, Heikki; Heino, Jani; Muotka, Timo

    2004-09-01

    Streams are naturally hierarchical systems, and their biota are affected by factors effective at regional to local scales. However, there have been only a few attempts to quantify variation in ecological attributes across multiple spatial scales. We examined the variation in several macroinvertebrate metrics and environmental variables at three hierarchical scales (ecoregions, drainage systems, streams) in boreal headwater streams. In nested analyses of variance, significant spatial variability was observed for most of the macroinvertebrate metrics and environmental variables examined. For most metrics, ecoregions explained more variation than did drainage systems. There was, however, much variation attributable to residuals, suggesting high among-stream variation in macroinvertebrate assemblage characteristics. Nonmetric multidimensional scaling (NMDS) and multiresponse permutation procedure (MRPP) showed that assemblage composition differed significantly among both drainage systems and ecoregions. The associated R-statistics were, however, very low, indicating wide variation among sites within the defined landscape classifications. Regional delineations explained most of the variation in stream water chemistry, ecoregions being clearly more influential than drainage systems. For physical habitat characteristics, by contrast, the among-stream component was the major source of variation. Distinct differences attributable to stream size were observed for several metrics, especially total number of taxa and abundance of algae-scraping invertebrates. Although ecoregions clearly account for a considerable amount of variation in macroinvertebrate assemblage characteristics, we suggest that a three-tiered classification system (stratification through ecoregion and habitat type, followed by assemblage prediction within these ecologically meaningful units) will be needed for effective bioassessment of boreal running waters.

  5. Predicting assemblages and species richness of endemic fish in the upper Yangtze River.

    PubMed

    He, Yongfeng; Wang, Jianwei; Lek-Ang, Sithan; Lek, Sovan

    2010-09-01

    The present work describes the ability of two modeling methods, Classification and Regression Tree (CART) and Random Forest (RF), to predict endemic fish assemblages and species richness in the upper Yangtze River, and then to identify the determinant environmental factors contributing to the models. The models included 24 predictor variables and 2 response variables (fish assemblage and species richness) for a total of 46 site units. The predictive quality of the modeling approaches was judged with a leave-one-out validation procedure. There was an average success of 60.9% and 71.7% to assign each site unit to the correct assemblage of fish, and 73% and 84% to explain the variance in species richness, by using CART and RF models, respectively. RF proved to be better than CART in terms of accuracy and efficiency in ecological applications. In any case, the mixed models including both land cover and river characteristic variables were more powerful than either individual one in explaining the endemic fish distribution pattern in the upper Yangtze River. For instance, altitude, slope, length, discharge, runoff, farmland and alpine and sub-alpine meadow played important roles in driving the observed endemic fish assemblage structure, while farmland, slope grassland, discharge, runoff, altitude and drainage area in explaining the observed patterns of endemic species richness. Therefore, the various effects of human activity on natural aquatic ecosystems, in particular, the flow modification of the river and the land use changes may have a considerable effect on the endemic fish distribution patterns on a regional scale. Copyright 2010 Elsevier B.V. All rights reserved.

  6. Autumn ichthyoplankton assemblage in the Yangtze Estuary shaped by environmental factors.

    PubMed

    Zhang, Hui; Xian, Weiwei; Liu, Shude

    2016-01-01

    This study investigated the response of the ichthyoplankton community to environmental changes in the Yangtze Estuary using canonical correspondence analysis. Ichthyoplankton community and environmental data were recorded during the autumns of 1998, 2000, 2002, 2003, 2004, 2007 and 2009. Among the ichthyoplankton, the dominant larval and juvenile families were the Engraulidae, Gobiidae and Salangidae, and the most common eggs were from Trichiurus lepturus. The ichthyoplankton was identified via canonical correspondence analysis to three assemblages: an estuary assemblage dominated by Chaeturichthys stigmatias, a coastal assemblage dominated by Engraulis japonicus and Stolephorus commersonii, and an offshore assemblage dominated by Trichiurus lepturus. Regarding environmental factors in the Yangtze Estuary, suspended matter and surface seawater salinity were the main factors influencing the distributions of the different assemblages, while sediment from the Yangtze River during the rainy season and chlorophyll a were the principle drivers of the annual variances in the distribution of ichthyoplankton assemblages. Our aims in this study were to provide detailed characterizations of the ichthyoplankton assemblage in the autumns of seven years, examine the long-term dynamics of autumn ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary.

  7. Autumn ichthyoplankton assemblage in the Yangtze Estuary shaped by environmental factors

    PubMed Central

    Liu, Shude

    2016-01-01

    This study investigated the response of the ichthyoplankton community to environmental changes in the Yangtze Estuary using canonical correspondence analysis. Ichthyoplankton community and environmental data were recorded during the autumns of 1998, 2000, 2002, 2003, 2004, 2007 and 2009. Among the ichthyoplankton, the dominant larval and juvenile families were the Engraulidae, Gobiidae and Salangidae, and the most common eggs were from Trichiurus lepturus. The ichthyoplankton was identified via canonical correspondence analysis to three assemblages: an estuary assemblage dominated by Chaeturichthys stigmatias, a coastal assemblage dominated by Engraulis japonicus and Stolephorus commersonii, and an offshore assemblage dominated by Trichiurus lepturus. Regarding environmental factors in the Yangtze Estuary, suspended matter and surface seawater salinity were the main factors influencing the distributions of the different assemblages, while sediment from the Yangtze River during the rainy season and chlorophyll a were the principle drivers of the annual variances in the distribution of ichthyoplankton assemblages. Our aims in this study were to provide detailed characterizations of the ichthyoplankton assemblage in the autumns of seven years, examine the long-term dynamics of autumn ichthyoplankton assemblages, and evaluate the influence of environmental factors on the spatial distribution and inter-annual variations of ichthyoplankton assemblages associated with the Yangtze Estuary. PMID:27114877

  8. South Asian monsoon history over the past 60 kyr recorded by radiogenic isotopes and clay mineral assemblages in the Andaman Sea

    NASA Astrophysics Data System (ADS)

    Ali, Sajid; Hathorne, Ed C.; Frank, Martin; Gebregiorgis, Daniel; Stattegger, Karl; Stumpf, Roland; Kutterolf, Steffen; Johnson, Joel E.; Giosan, Liviu

    2015-02-01

    The Late Quaternary variability of the South Asian (or Indian) monsoon has been linked with glacial-interglacial and millennial scale climatic changes but past rainfall intensity in the river catchments draining into the Andaman Sea remains poorly constrained. Here we use radiogenic Sr, Nd, and Pb isotope compositions of the detrital clay-size fraction and clay mineral assemblages obtained from sediment core NGHP Site 17 in the Andaman Sea to reconstruct the variability of the South Asian monsoon during the past 60 kyr. Over this time interval ɛNd values changed little, generally oscillating between -7.3 and -5.3 and the Pb isotope signatures are essentially invariable, which is in contrast to a record located further northeast in the Andaman Sea. This indicates that the source of the detrital clays did not change significantly during the last glacial and deglaciation suggesting the monsoon was spatially stable. The most likely source region is the Irrawaddy river catchment including the Indo-Burman Ranges with a possible minor contribution from the Andaman Islands. High smectite/(illite + chlorite) ratios (up to 14), as well as low 87Sr/86Sr ratios (0.711) for the Holocene period indicate enhanced chemical weathering and a stronger South Asian monsoon compared to marine oxygen isotope stages 2 and 3. Short, smectite-poor intervals exhibit markedly radiogenic Sr isotope compositions and document weakening of the South Asian monsoon, which may have been linked to short-term northern Atlantic climate variability on millennial time scales. This article was corrected on 18 MAR 2015. See the end of the full text for details.

  9. Electroacoustic isoelectric point determinations of bauxite refinery residues: different neutralization techniques and minor mineral effects.

    PubMed

    Freire, Tiago S S; Clark, Malcolm W; Comarmond, M Josick; Payne, Timothy E; Reichelt-Brushett, Amanda J; Thorogood, Gordon J

    2012-08-14

    Bauxite refinery residue (BRR) is a highly caustic, iron hydroxide-rich byproduct from alumina production. Some chemical treatments of BRR reduce soluble alkalinity and lower residue pH (to values <10) and generate a modified BRR (MBRR). MBRR has excellent acid neutralizing (ANC) and trace-metal adsorption capacities, making it particularly useful in environmental remediation. However, soluble ANC makes standard acid-base isoelectric point (IEP) determination difficult. Consequently, the IEP of a BRR and five MBRR derivatives (sulfuric acid-, carbon dioxide-, seawater-, a hybrid neutralization, i.e, partial CO(2) neutralization followed by seawater, and an activated-seawater-neutralized MBRR) were determined using electroacoustic techniques. Residues showed three significantly different groups of IEPs (p < 0.05) based around the neutralization used. Where the primary mineral assemblage is effectively unchanged, the IEPs were not significantly different from BRR (pH 6.6-6.9). However, neutralizations generating neoformational minerals (alkalinity precipitation) significantly increased the IEP to pH 8.1, whereas activation (a removal of some primary mineralogy) significantly lowered the IEP to pH 6.2. Moreover, surface charging curves show that surfaces remain in the ±30 mV surface charge instability range, which provides an explanation as to why MBRRs remove trace metals and oxyanions over a broad pH range, often simultaneously. Importantly, this work shows that minor mineral components in complex mineral systems may have a disproportionate effect on the observable bulk IEP. Furthermore, this work shows the appropriateness of electroacoustic techniques in investigating samples with significant soluble mineral components (e.g., ANC).

  10. The electrical resistivity signature of a fault controlling gold mineralization and the implications for Mesozoic mineralization: a case study from the Jiaojia Fault, eastern China

    NASA Astrophysics Data System (ADS)

    Zhang, Kun; Lü, Qingtian; Yan, Jiayong; Hu, Hao; Fu, GuangMing

    2017-08-01

    We use 3D audio magnetotelluric method to the south segment of Jiaojia fault belt, and obtain the 3D electrical model of this area. Regional geophysical data were combined in an analysis of strata and major structural distribution in the study area, and included the southern segment of the Jiaojia fault zone transformed into two fault assemblages. Together with the previous studies of the ore-controlling action of the Jiaojia fault belt and deposit characteristics, the two faults are considered to be favorable metallogenic provinces, because some important features coupled with them, such as the subordinate fault intersection zone and several fault assemblages in one fault zone. It was also suggested the control action of later fault with reversed downthrows to the ore distribution. These studies have enabled us to predict the presence of two likely target regions of mineralization, and are prospecting breakthrough in the southern section of Jiaojia in the Shandong Peninsula, China.

  11. Differential Response of Fish Assemblages to Coral Reef-Based Seaweed Farming

    PubMed Central

    Hehre, E. James; Meeuwig, J. J.

    2015-01-01

    As the global demand for seaweed-derived products drives the expansion of seaweed farming onto shallow coral ecosystems, the effects of farms on fish assemblages remain largely unexplored. Shallow coral reefs provide food and shelter for highly diverse fish assemblages but are increasingly modified by anthropogenic activities. We hypothesized that the introduction of seaweed farms into degraded shallow coral reefs had potential to generate ecological benefits for fish by adding structural complexity and a possible food source. We conducted 210 transects at 14 locations, with sampling stratified across seaweed farms and sites adjacent to and distant from farms. At a seascape scale, locations were classified by their level of exposure to human disturbance. We compared sites where (1) marine protected areas (MPAs) were established, (2) neither MPAs nor blast fishing was present (hence “unprotected”), and (3) blast fishing occurred. We observed 80,186 fish representing 148 species from 38 families. The negative effects of seaweed farms on fish assemblages appeared stronger in the absence of blast fishing and were strongest when MPAs were present, likely reflecting the positive influence of the MPAs on fish within them. Species differentiating fish assemblages with respect to seaweed farming and disturbance were typically small but also included two key target species. The propensity for seaweed farms to increase fish diversity, abundance, and biomass is limited and may reduce MPA benefits. We suggest that careful consideration be given to the placement of seaweed farms relative to MPAs. PMID:25822342

  12. Differential response of fish assemblages to coral reef-based seaweed farming.

    PubMed

    Hehre, E James; Meeuwig, J J

    2015-01-01

    As the global demand for seaweed-derived products drives the expansion of seaweed farming onto shallow coral ecosystems, the effects of farms on fish assemblages remain largely unexplored. Shallow coral reefs provide food and shelter for highly diverse fish assemblages but are increasingly modified by anthropogenic activities. We hypothesized that the introduction of seaweed farms into degraded shallow coral reefs had potential to generate ecological benefits for fish by adding structural complexity and a possible food source. We conducted 210 transects at 14 locations, with sampling stratified across seaweed farms and sites adjacent to and distant from farms. At a seascape scale, locations were classified by their level of exposure to human disturbance. We compared sites where (1) marine protected areas (MPAs) were established, (2) neither MPAs nor blast fishing was present (hence "unprotected"), and (3) blast fishing occurred. We observed 80,186 fish representing 148 species from 38 families. The negative effects of seaweed farms on fish assemblages appeared stronger in the absence of blast fishing and were strongest when MPAs were present, likely reflecting the positive influence of the MPAs on fish within them. Species differentiating fish assemblages with respect to seaweed farming and disturbance were typically small but also included two key target species. The propensity for seaweed farms to increase fish diversity, abundance, and biomass is limited and may reduce MPA benefits. We suggest that careful consideration be given to the placement of seaweed farms relative to MPAs.

  13. Temporal distribution of intertidal macrozoobenthic assemblages in a Nanozostera noltii-dominated area (Lagoon of Venice).

    PubMed

    Tagliapietra, D; Pessa, G; Cornello, M; Zitelli, A; Magni, P

    2016-03-01

    We describe the temporal distribution of intertidal macrozoobenthic assemblages in a small marsh pond of the Lagoon of Venice colonized by the seagrass Nanozostera noltii (Hornemman) Tomlinson et Posluzny. Three stations ranging in the degree of N. noltii cover were selected about 100 m apart and sampled 9 times at regular intervals from March 1996 to March 1997. We applied the concepts of resistance and resilience to "natural stress" (e.g. extent of protection from seagrass meadows, exposure of macrozoobenthic assemblages to high temperatures in summer) with the aim to assess the stability of a community along a gradient of seagrass coverage. Results showed that the most structured and taxa-rich macrozoobenthic assemblage occurred at the station covered by a continuous stand of N. noltii, where permanent taxa (i.e. found in 100% of samples) were almost double than those found at the other stations. During the annual cycle, the macrozoobenthic assemblages showed a cyclical pattern, with temporal fluctuations increasing as they moved further away from the seagrass beds. We propose the role of N. noltii offering structural complexity and stability as the more probable explanation to the observed differences between stations in the intertidal assemblages. Copyright © 2015 Elsevier Ltd. All rights reserved.

  14. Iron disulfide minerals and the genesis of roll-type uranium deposits.

    USGS Publications Warehouse

    Reynolds, R.L.; Goldhaber, M.B.

    1983-01-01

    Studies of the distribution of and textural relationships among pyrite and marcasite in host rocks for a number of roll-type sedimentary U deposits have enabled identification of several generations of FeS2 minerals. A critical factor influencing mineral formation is the complex relationship of pH and the S species that are precursors of FeS2 minerals. The presence or absence of intrinsic organic matter for bacterial sulphate reduction also plays a key role. In deposits lacking such organic matter, the pre-ore is often euhedral pyrite and the ore-stage is marcasite. In contrast, in deposits containing organic matter the pre-ore is pyrite occurring as framboids or as replacements of plant material, and the ore-stage is also pyrite. These contrasting FeS2 assemblages and their respective modes of origin are consistent with previously proposed biogenic and nonbiogenic theories of the genesis of roll-type U deposits. -J.E.S.

  15. Platinum-group mineralization at the margin of the Skaergaard intrusion, East Greenland

    NASA Astrophysics Data System (ADS)

    Andersen, Jens C. Ø.; Rollinson, Gavyn K.; McDonald, Iain; Tegner, Christian; Lesher, Charles E.

    2017-08-01

    Two occurrences of platinum-group elements (PGEs) along the northern margin of the Skaergaard intrusion include a sulfide-bearing gabbro with slightly less than 1 ppm PGE + Au and a clinopyroxene-actinolite-plagioclase-biotite-ilmenite schist with 16 vol% sulfide and 1.8 ppm PGE + Au. Both have assemblages of pyrrhotite, pentlandite, and chalcopyrite typical for orthomagmatic sulfides. Matching platinum-group mineral assemblages with sperrylite (PtAs2), kotulskite (Pd(Bi,Te)1-2), froodite (PdBi2), michenerite (PdBiTe), and electrum (Au,Ag) suggest a common origin. Petrological and geochemical similarities suggest that the occurrences are related to the Skaergaard intrusion. The Marginal Border Series locally displays Ni depletion consistent with sulfide fractionation, and the PGE fractionation trends of the occurrences are systematically enriched by 10-50 times over the chilled margin. The PGE can be explained by sulfide-silicate immiscibility in the Skaergaard magma with R factors of 110-220. Nickel depletion in olivine suggests that the process occurred within the host cumulate, and the low R factors require little sulfide mobility. The sulfide assemblages are different to the chalcopyrite-bornite-digenite assemblage found in the Skaergaard Layered Series and Platinova Reef. These differences can be explained by the early formation of sulfide melt, while magmatic differentiation or sulfur loss caused the unusual sulfide assemblage within the Layered Series. The PGEs indicate that the sulfides formed from the Skaergaard magma. The sulfides and PGEs could not have formed from the nearby Watkins Fjord wehrlite intrusion, which is nearly barren in sulfide. We suggest that silicate-sulfide immiscibility led to PGE concentration where the Skaergaard magma became contaminated with material from the Archean basement.

  16. Spatial and temporal structure of fish assemblages in an ''inverse estuary'', the Sine Saloum system (Senegal)

    NASA Astrophysics Data System (ADS)

    Simier, M.; Blanc, L.; Aliaume, C.; Diouf, P. S.; Albaret, J. J.

    2004-01-01

    As a consequence of the Sahelian drought, the Sine Saloum, a large estuarine system located in Senegal (West Africa), has become an "inverse estuary" since the late sixties, i.e. salinity increases upstream and reaches 100 in some places. To study the fish assemblages of such a modified system, a survey was conducted in 1992, collecting fish every two months with a purse seine at eight sites spread over the three main branches of the estuary. A total of 73 species belonging to 35 families were identified. Eight species comprised 97% of the total numbers of fish. The predominant species was a small clupeid, Sardinella maderensis, representing more than half of the total biomass and nearly 70% of the total number of fish. The spatio-temporal structure of the fish assemblages was studied using the STATIS-CoA method, which combines the multitable approach with the correspondence analysis method. Whatever the season, a strong spatial organization of fish assemblages was observed, mainly related to depth and salinity. Three types of assemblages were identified. In shallow water areas, fish assemblages were dominated by Mugilidae, Gerreidae and Cichlidae and were stable with time. In open water areas, large fluctuations in the species composition were observed, due to the occasional presence of large schools of pelagic species: in the southern area, where salinity and water transparency were the lowest, the main species were Ilisha africana, Brachydeuterus auritus and Chloroscombrus chrysurus, associated with a few Sciaenidae and Tetraodontidae, while the poorest areas were characterized by only two dominant species, S. maderensis and Scomberomorus tritor.

  17. Meiofaunal assemblages associated with native and non-indigenous macroalgae

    NASA Astrophysics Data System (ADS)

    Veiga, Puri; Sousa-Pinto, Isabel; Rubal, Marcos

    2016-07-01

    Meiofauna is a useful tool to detect effects of different disturbances; however, its relevance in the frame of biological invasions has been almost fully neglected. Meiofaunal assemblages associated with the invasive macroalga Sargassum muticum were studied and compared with those associated with two native macroalgae (Bifurcaria bifurcata and Chondrus crispus). We used a linear mixed model to determine the influence of habitat size (i.e. macroalgal biomass) in shaping meiofaunal assemblages. Results showed that habitat size (i.e. macroalgal biomass) shaped meiofaunal assemblages influencing its abundance, richness and structure. However, the identity of macroalga (i.e. species) appears also to play a significant role, particularly the differences of complexity among the studied species may shape their meiofaunal assemblages. Finally, the invasive macroalga appears to influence positively species richness. Our results highlight the need of including different faunal components to achieve a comprehensive knowledge on effects of invasive macroalgae and that meiofaunal assemblages may be a valuable tool to examine them.

  18. Epibenthic assemblages in the Celtic Sea and associated with the Jones Bank

    NASA Astrophysics Data System (ADS)

    Ellis, J. R.; Martinez, I.; Burt, G. J.; Scott, B. E.

    2013-10-01

    The epibenthic assemblages in the Celtic Sea are described from the catches from 2 m beam trawl surveys undertaken from 2000 to 2009. During this period 154 samples were collected. The most ubiquitous species in the study area were the natantid shrimps Processa spp. and Crangon allmanni, the hermit crabs Pagurus prideaux and Anapagurus laevis, sand star Astropecten irregularis and spotted dragonet Callionymus maculatus. Multivariate community analyses indicated that catches (numbers per tow) were distributed across six assemblages, two of which were predominant in the study area. Most catches were attributed to either a 'shelf edge assemblage', which was widespread in deeper waters (114-423 m water depth) or an 'outer shelf assemblage' that occurred across much of the Celtic Sea north of 49°N in waters 49-175 m deep. The dominant species along the edge of the continental shelf were the hormathid anemome Actinauge richardi, sea spider Pycnogonum littorale (which associated with A. richardi), Devonshire cup coral Caryophyllia smithii and the swimming crab Macropipus tuberculatus. The dominant species in the outer shelf assemblage included P. prideaux, C. allmanni, A. laevis and common starfish Asterias rubens. Stations closer to shore were relatively distinct and catches in this 'inner shelf assemblage' were composed primarily of an inshore fauna (e.g. Ophiura ophiura, C. allmanni and Liocarcinus holsatus). Stations in the southern part of the survey grid were also relatively distinct ('southern Celtic Sea assemblage'), and several large echinoderms (Porania pulvillus, Stichastrella rosea and Anseropoda placenta) dominated at these sites. Three of the deepest stations were also relatively distinct, as were a group of stations in the muddy habitat of the Celtic Deep and comparable grounds elsewhere in the region, where Nucula sulcata and Alpheus glaber were characteristic. Catches on the shallower parts of the Jones Bank (and on another bank in the region) were

  19. Performing Mineral Hydration Experiments in the CheMin Diffractometer on Mars

    NASA Technical Reports Server (NTRS)

    Vaniman, D. T.; Yen, A. S.; Rampe, E. B.; Blake, D. F.; Chipera, S. J.; Morookian, J. M.; Ming, D. W.; Bristow, T. F.; Morris, R. V.; Geller, R.; hide

    2016-01-01

    Laboratory work is the cornerstone of experimental planetary geochemistry, mineralogy, and petrology, but much is to be gained by "experiments" while on a planet surface. Earth-bound experiments are often limited in ability to control multiple conditions relevant to planetary bodies (e.g. cycles in temperature and vapor pressure of water), but observations on-planet provide a unique opportunity where conditions are native to the planet and those affected by sampling and analysis can be constrained. The CheMin XRD instrument on Mars Science Laboratory has been able to test mineral hydration in samples held for up to 300 Mars days (sols). Clay minerals sampled at Yellowknife Bay early in the mission had both collapsed (10 Å) and expanded (13.2 Å) basal spacing. Collapsed interlayers were expected, but larger spacing was not; it was uncertain whether larger basal spacing would collapse on prolonged exposure to warmer conditions inside CheMin. Observation over several hundred sols showed no collapse, with the conclusion that expanded interlayer spacing was due to partial intercalation by metal-hydroxyl groups that resist dehydration. More recently, a sample of the Murray Formation, Oudam, provided the first XRD detection of gypsum and a chance to observe gypsum stability. Laboratory work suggests gypsum should be stable at Mars surface conditions, and indeed gypsum has been observed from orbit at higher latitudes and in thick veins at Yellowknife Bay by Mastcam reflectance spectra. Laboratory experiments have shown that on dehydration the gypsum would not become X-ray amorphous but would rather transform to a water-deficient bassanite structure. Over a period of 37 sols, it was observed that the Oudam sample in CheMin transformed from an assemblage of gypsum+anhydrite, to gypsum+bassanite+anhydrite, and finally to bassanite+anhydrite. Mg-sulfates were also anticipated but have not been observed in CheMin despite chemical evidence for their presence. Unlike gypsum

  20. Fish assemblage dynamics in a Neotropical floodplain relative to aquatic macrophytes and the homogenizing effect of a flood pulse

    USGS Publications Warehouse

    Gomes, L.C.; Bulla, C. K.; Agostinho, A. A.; Vasconcelos, L. P.; Miranda, Leandro E.

    2012-01-01

    The presence of aquatic macrophytes is a key factor in the selection of habitats by fish in floodplain lakes because these plants enhance the physical and biological complexities of aquatic habitats. The seasonal flood pulse may influence this interaction, but there is no information in the literature about the effects that flood events may have on macrophytes assemblages and its associated effects on fish assemblages. Thus, this article aimed to investigate whether species richness, evenness and similarities in fish assemblage composition differed between littoral areas vegetated with macrophytes and unvegetated areas, before and after a flood. We sampled three lakes in the floodplain of the upper Paraná River basin. Sampling was conducted before (December 2004 and January 2005) and after (early March, late March and May 2005) a flood event. Overall, species richness and evenness were higher in macrophytes-covered areas. Before the flood, the composition of fish assemblages was distinct when comparing vegetated and unvegetated areas. After the flood, the similarity in fish assemblage composition was higher, indicating a homogenization effect of floods for fish inhabiting littoral areas of floodplain lakes. After the flood, opportunistic species dominated the fish assemblages in aquatic macrophytes, apparently restructuring assemblages in the littoral, restarting a succession process. Thus, the observed homogenization effect of the flood could minimize biological interactions and could induce fish assemblages to begin a new process of structurization.

  1. Temporal changes of a macrobenthic assemblage in harsh lagoon sediments

    NASA Astrophysics Data System (ADS)

    Como, Serena; Magni, Paolo

    2009-08-01

    An opportunistic macrobenthic assemblage was studied from 2001 to 2003 in a central area of the Cabras lagoon (western Sardinia, Italy), known to be affected by environmental disturbances (i.e. organic over-enrichment of sediments, and episodic events of hypoxia/anoxia and sulphide development). We identified recurrent seasonal changes in this macrobenthic assemblage, with a general impoverishment in summer and a recovery in winter/spring. The nereids Neanthes succinea and Hediste diversicolor were found to replace the spionid Polydora ciliata as the most dominant species in the summer for 3 consecutive years. Occasional, unsynchronized appearances of small-sized deposit feeders, such as Tubificidae, Capitella cf. capitata, chironomid larvae and Hydrobia spp., were observed in winter/spring. We suggest that these changes are driven by the interplay of environmental conditions (worse in summer) with numerous biotic factors. This includes different tolerance levels of taxa to low oxygen concentrations and sulphides, variability in larval supply and post-larval transport, as well as competition for space and food between and within different functional groups, and facilitation through animal bioturbation and sediment reoxidation. A conceptual model is proposed to demonstrate how environmental conditions and biotic interactions may control the benthic assemblage in such a harsh lagoon environment.

  2. Opaque Assemblages in CK and CV Carbonaceous Chondrites

    NASA Technical Reports Server (NTRS)

    Neff, K. E.; Righter, K.

    2006-01-01

    CK carbonaceous chondrites are the only group of carbonaceous chondrites that exhibit thermal metamorphism. As a result, CKs display features of metamorphism such as silicate darkening, recrystallization and shock veins. Calcium Aluminum Inclusions and Fe-Ni metal are rare. CV carbonaceous chondrites are unequilibrated and have two subgroups; oxidized and reduced. The CV and CK carbonaceous chondrite groups have been compared to each other often because of petrographic similarities, such as overlapping oxygen isotopic ratios. Scientists have suggested the two groups of carbonaceous chondrites formed from the same parent body and CKs are equilibrated CV chondrites [1, 2]. The oxidized CV group has been most closely related to CKs. This study examines the petrology and mineralogy of CKs and CVs focusing on opaque minerals found in the meteorites. Using the oxide, metal and sulfide assemblages, constraints can be placed on the temperature and oxygen fugacity at which the meteorites equilibrated. The temperature and oxygen fugacity of the CK and CV chondrites can be compared in order to help define their formation history.

  3. [Characteristics of ichthyoplankton assemblages in Yangtze Estuary and adjacent waters in spring].

    PubMed

    Liu, Shu-De; Xian, Wei-Wei; Liu, Dong

    2008-10-01

    Based on the investigation data of ichthyoplankton assemblages and environmental factors in Yangtze Estuary and adjacent waters in May 1999 and 2001, the characteristics of ichthyoplankton assemblages in these areas in spring were studied by using TWINSPAN (two-way indicator species analysis) and CCA (canonical correspondence analysis). A total of 11 540 ichthyoplankton individuals were taxonomically identified, belonging to 11 orders, 18 families and 32 species, of which, Coilia mystus, Engraulis japonicus, Chaeturichthys hexanema, Allanetta bleekeri, and Trachidermis fasciatus were the dominant species. The ichthyoplankton communities were classified into three assemblages by using TWINSPAN, i.e., estuarine assemblage dominated by C. mystus, coastal assemblage dominated by A. bleekeri and T. fasciatus; and shelf assemblage featured by E. japonicus and C. hexanema. The CCA ordination of the interrelations among the three assemblages and their correlations to the environmental variables revealed that salinity, depth, dissolved oxygen, and total suspended particulate matter were the major factors affecting the ichthyoplankton assemblages in the study areas.

  4. DETECTION AND COMPARISON OF GIARDIAVIRUS (GLV) FROM DIFFERENT ASSEMBLAGES OF GIARDIA DUODENALIS

    USDA-ARS?s Scientific Manuscript database

    Five assemblages of Giardia were identified from cysts in cattle, dog, cat, sheep, and reindeer feces using ribosomal DNA (rDNA) sequencing. Assemblage A was present in cattle and reindeer feces, Assemblages C and D were present in dog feces, Assemblage E was present in cattle and sheep feces, and ...

  5. Tropical Mosquito Assemblages Demonstrate ‘Textbook’ Annual Cycles

    PubMed Central

    Franklin, Donald C.; Whelan, Peter I.

    2009-01-01

    Background Annual biological rhythms are often depicted as predictably cyclic, but quantitative evaluations are few and rarely both cyclic and constant among years. In the monsoon tropics, the intense seasonality of rainfall frequently drives fluctuations in the populations of short-lived aquatic organisms. However, it is unclear how predictably assemblage composition will fluctuate because the intensity, onset and cessation of the wet season varies greatly among years. Methodology/Principal Findings Adult mosquitoes were sampled using EVS suction traps baited with carbon dioxide around swamplands adjacent to the city of Darwin in northern Australia. Eleven sites were sampled weekly for five years, and one site weekly for 24 years, the sample of c. 1.4 million mosquitoes yielding 63 species. Mosquito abundance, species richness and diversity fluctuated seasonally, species richness being highly predictable. Ordination of assemblage composition demonstrated striking annual cycles that varied little from year to year. The mosquito assemblage was temporally structured by a succession of species peaks in abundance. Conclusion/Significance Ordination provided strong visual representation of annual rhythms in assemblage composition and the means to evaluate variability among years. Because most mosquitoes breed in shallow freshwater which fluctuates with rainfall, we did not anticipate such repeatability; we conclude that mosquito assemblage composition appears adapted to predictable elements of the rainfall. PMID:20011531

  6. Using diatom assemblages to assess urban stream conditions

    USGS Publications Warehouse

    Walker, C.E.; Pan, Y.

    2006-01-01

    We characterized changes in diatom assemblages along an urban-to-rural gradient to assess impacts of urbanization on stream conditions. Diatoms, water chemistry, and physical variables of riffles at 19 urban and 28 rural stream sites were sampled and assessed during the summer base flow period. Near stream land use was characterized using GIS. In addition, one urban and one rural site were sampled monthly throughout a year to assess temporal variation of diatom assemblages between the urban and rural stream sites. Canonical correspondence analysis (CCA) showed that the 1st ordination axis distinctly separated rural and urban sites. This axis was correlated with conductivity (r = 0.75) and % near-stream commercial/industrial land use (r = 0.55). TWINSPAN classified all sites into four groups based on diatom assemblages. These diatom-based site groups were significantly different in water chemistry (e.g., conductivity, dissolved nutrients), physical habitat (e.g., % stream substrate as fines), and near-stream land use. CCA on the temporal diatom data set showed that diatom assemblages had high seasonal variation along the 2nd axis in both urban and rural sites, however, rural and urban sites were well separated along the 1st ordination axis. Our results suggest that changes in diatom assemblages respond to urban impacts on stream conditions. ?? Springer 2006.

  7. Influence of Interspecific Competition and Landscape Structure on Spatial Homogenization of Avian Assemblages

    PubMed Central

    Robertson, Oliver J.; McAlpine, Clive; House, Alan; Maron, Martine

    2013-01-01

    Human-induced biotic homogenization resulting from landscape change and increased competition from widespread generalists or ‘winners’, is widely recognized as a global threat to biodiversity. However, it remains unclear what aspects of landscape structure influence homogenization. This paper tests the importance of interspecific competition and landscape structure, for the spatial homogeneity of avian assemblages within a fragmented agricultural landscape of eastern Australia. We used field observations of the density of 128 diurnal bird species to calculate taxonomic and functional similarity among assemblages. We then examined whether taxonomic and functional similarity varied with patch type, the extent of woodland habitat, land-use intensity, habitat subdivision, and the presence of Manorina colonies (a competitive genus of honeyeaters). We found the presence of a Manorina colony was the most significant factor positively influencing both taxonomic and functional similarity of bird assemblages. Competition from members of this widespread genus of native honeyeater, rather than landscape structure, was the main cause of both taxonomic and functional homogenization. These species have not recently expanded their range, but rather have increased in density in response to agricultural landscape change. The negative impacts of Manorina honeyeaters on assemblage similarity were most pronounced in landscapes of moderate land-use intensity. We conclude that in these human-modified landscapes, increased competition from dominant native species, or ‘winners’, can result in homogeneous avian assemblages and the loss of specialist species. These interacting processes make biotic homogenization resulting from land-use change a global threat to biodiversity in modified agro-ecosystems. PMID:23724136

  8. Habitat characteristics affecting fish assemblages on a Hawaiian coral reef

    USGS Publications Warehouse

    Friedlander, A.M.; Parrish, J.D.

    1998-01-01

    Habitat characteristics of a reef were examined as potential influences on fish assemblage structure, using underwater visual census to estimate numbers and biomass of all fishes visible on 42 benthic transects and making quantitative measurements of 13 variables of the corresponding physical habitat and sessile biota. Fish assemblages in the diverse set of benthic habitats were grouped by detrended correspondence analysis, and associated with six major habitat types. Statistical differences were shown between a number of these habitat types for various ensemble variables of the fish assemblages. Overall, both for complete assemblages and for component major trophic and mobility guilds, these variables tended to have higher values where reef substratum was more structurally or topographically complex, and closer to reef edges. When study sites were separately divided into five depth strata, the deeper strata tended to have statistically higher values of ensemble variables for the fish assemblages. Patterns with depth varied among the various trophic and mobility guilds. Multiple linear regression models indicated that for the complete assemblages and for most trophic and mobility guilds, a large part of the variability for most ensemble variables was explained by measures of holes in the substratum, with important contributions from measured substratum rugosity and depth. A strong linear relationship found by regression of mean fish length on mean volume of holes in the reef surface emphasized the importance of shelter for fish assemblages. Results of this study may have practical applications in designing reserve areas as well as theoretical value in helping to explain the organization of reef fish assemblages.

  9. Mineral Mapping with AVIRIS and EO-1 Hyperion

    NASA Technical Reports Server (NTRS)

    Kruse, Fred A.

    2004-01-01

    Imaging Spectrometry data or Hyperspectral Imagery (HSI) acquired using airborne systems have been used in the geologic community since the early 1980 s and represent a mature technology (Goetz et al., 1985; Kruse et al., 1999). The solar spectral range, 0.4 to 2.5 m, provides abundant information about many important Earth-surface minerals (Clark et al., 1990). In particular, the 2.0 to 2.5 m (SWIR) spectral range covers spectral features of hydroxyl-bearing minerals, sulfates, and carbonates common to many geologic units and hydrothermal alteration assemblages. Previous research has proven the ability of airborne and spaceborne hyperspectral systems to uniquely identify and map these and other minerals, even in sub-pixel abundances (Kruse and Lefkoff, 1993; Boardman and Kruse, 1994; Boardman et al., 1995; Kruse, et al., 1999). This paper describes a case history for a site in northern Death Valley, California and Nevada along with selected SNR calculations/results for other sites around the world. Various hyperspectral mineral mapping results for this site have previously been presented and published (Kruse, 1988; Kruse et al., 1993, 1999, 2001, 2002, 2003), however, this paper presents a condensed summary of key details for hyperspectral data from 2000 and 2001 and the results of accuracy assessment for satellite hyperspectral data compared to airborne hyperspectral data used as ground truth.

  10. Spatiotemporal patterns of the fish assemblages downstream of the Gezhouba Dam on the Yangtze River.

    PubMed

    Tao, Jiangping; Gong, Yutian; Tan, Xichang; Yang, Zhi; Chang, Jianbo

    2012-07-01

    An explicit demonstration of the changes in fish assemblages is required to reveal the influence of damming on fish species. However, information from which to draw general conclusions regarding changes in fish assemblages is insufficient because of the limitations of available approaches. We used a combination of acoustic surveys, gillnet sampling, and geostatistical simulations to document the spatiotemporal variations in the fish assemblages downstream of the Gezhouba Dam, before and after the third impoundment of Three Gorges Reservoir (TGR). To conduct a hydroacoustic identification of individual species, we matched the size distributions of the fishes captured by gillnet with those of the acoustic surveys. An optimum threshold of target strength of -50 dB re 1 m(2) was defined, and acoustic surveys were purposefully extended to the selected fish assemblages (i.e., endemic Coreius species) that was acquired by the size and species selectivity of the gillnet sampling. The relative proportion of fish species in acoustic surveys was allocated based on the composition (%) of the harvest in the gillnet surveys. Geostatistical simulations were likewise used to generate spatial patterns of fish distribution, and to determine the absolute abundance of the selected fish assemblages. We observed both the species composition and the spatial distribution of the selected fish assemblages changed significantly after implementation of new flow regulation in the TGR, wherein an immediate sharp population decline in the Coreius occurred. Our results strongly suggested that the new flow regulation in the TGR impoundment adversely affected downstream fish species, particularly the endemic Coreius species. To determine the factors responsible for the decline, we associated the variation in the fish assemblage patterns with changes in the environment and determined that substrate erosion resulting from trapping practices in the TGR likely played a key role.

  11. Icthyoplankton Assemblages and Distribution in the Chukchi Sea 2012-2013

    NASA Astrophysics Data System (ADS)

    Busby, M. S.; Duffy-Anderson, J. T.; Mier, K. L.; Tabisola, H. M.

    2016-02-01

    There is significant interest in the effects of climate change on the Pacific arctic ecosystem, and in determining relationships between physical drivers and biological response. Ichthyoplankton surveys have become an integral component of ecosystem studies in the Pacific arctic over the past decade. In summer 2012 and 2013, large scale fisheries oceanographic surveys that included ichthyoplankton tows were conducted in the northern Bering and eastern Chukchi Seas as part of the Arctic Ecosystem Integrated Survey (Arctic Eis). Spatial and temporal analyses of fish larvae collected determined that yellowfin sole (Limanda aspera) was the most abundant larval fish caught followed by Arctic cod (Boreogadus saida). Cluster analyses showed L. aspera to be the dominant component of a southern, nearshore assemblage strongly associated with the northward moving Alaska Coastal Current (ACC) characterized by relatively warm-low salinity water. Boreogadus saida larvae dominated a more northern assemblage in close proximity to the ice edge and were more abundant in 2013 than 2012. Collections of pelagic fish eggs determined locations of spawning centers for L. aspera nearshore of the Seward Peninsula and Bering flounder (Hippoglossoides robustus) to the west and offshore from Point Barrow in 2012. Similar but less pronounced trends in egg distribution were observed in 2013. Larvae of the forage fish species capelin (Mallotus villosus) and Arctic sand lance (Ammodytes hexapterus) were important assemblage components in 2012 and 2013 respectively. These patterns in the distribution of eggs and larvae are similar to those observed in other studies. The influence of circulation patterns on the distributions of fish in the Chukchi Sea is being investigated and will be discussed.

  12. A comparison of resident fish assemblages in managed and unmanaged coastal wetlands in North Carolina and South Carolina

    USGS Publications Warehouse

    Robinson, Kelly F.; Jennings, Cecil A.

    2014-01-01

    The dominant fish species within impounded coastal wetlands in the southeastern US may be different from the species that dominate natural marshes. We tested the hypothesis that resident fish assemblages inhabiting impounded coastal wetlands in South Carolina would differ from resident assemblages in natural marshes of the southeastern United States. We used rarefied species richness, Shannon's H' diversity,J' evenness, Morisita's index of similarity, and the percent similarity index to compare resident fish assemblages from two impoundments to 12 open-marsh resident fish assemblages from previously published studies in North and South Carolina. We used rotenone to sample fish assemblages in impoundments. The assemblages in natural marsh habitat had been sampled with rotenone and seines. We classified comparisons yielding a similarity index ≥0.50 as moderately similar and those with an index ≥0.75 as very similar. Fifty-three percent of the among-impoundment comparisons (Morisita's index) were at least moderately similar, whereas 7% of impoundment—natural marsh comparisons were moderately similar. A difference in tidal influence was the only parameter in the best-fitting model describing the observed Morisita's indices. The index of similarity decreased by 63% when tidal influence differed between compared assemblages. Species richness and diversity were greater in impoundments than natural marshes, but evenness was similar between habitat types. Our results support the hypothesis that resident fish assemblages in impounded wetlands and natural marshes are different, and suggest that a degree of tidal influence is the most important factor behind the difference.

  13. Cenozoic exhumation and tectonic evolution of the Qimen Tagh Range, northern Tibetan Plateau: Insights from the heavy mineral compositions, detrital zircon U-Pb ages and seismic interpretations

    NASA Astrophysics Data System (ADS)

    Zhu, W.; Wu, C.; Wang, J.; Zhou, T.; Zhang, C.; Li, J.

    2017-12-01

    The Qaidam Basin is the largest intermountain basin within the Tibetan Plateau. The Cenozoic sedimentary flling characteristics of the basin was significantly influenced by the surrounding tectonic belt, such as the Altyn Tagh Range to the north-west and Qimen Tagh Range to the south. The tectonic evolution of the Qimen Tagh Range and the structural relationship between the Qaidam Basin and Qimen Tagh Range remain controversial. To address these issues, we analyzed thousands of heavy mineral data, 720 detrital zircon ages and seismic data of the Qaidam Basin. Based on the regional geological framework and our kinematic analyses, the Cenozoic tectonic evolution of the Qimen Tagh Range can be divided into two stages. From the Early Eocene to the Middle Miocene, the Devonian (400-360 Ma) and Permian to Triassic (300-200 Ma) zircons which were sourced from the Qimen Tagh Range and the heavy mineral assemblage of zircon-leucoxene-garnet-sphene on the north flank of the Qimen Tagh Range indicated that the Qimen Tagh Range has been exhumed before the Eocene and acted as the primary provenance of the Qaidam Basin. The Kunbei fault system (i.e. the Kunbei, Arlar and Hongliuquan faults) in the southwest of the Qaidam Basin, which can be seen as a natural study window of the Qimen Tagh Range, was characterized by left-lateral strike-slip faults and weak south-dipping thrust faults based on the seismic sections. This strike-slip motion was generated by the uplift of the Tibetan Plateau caused by the onset of the Indian-Eurasian collision. Since the Middle Miocene, the primary mineral assemblages along the northern flank of the Qimen Tagh Range changed from the zircon-leucoxene-garnet-sphene assemblage to the epidote-hornblende-garnet-leucoxene assemblage. Simultaneously, the Kunbei fault system underwent intense south-dipping thrusting, and a nearly 2.2-km uplift can be observed in the hanging wall of the Arlar fault. We attributed these variations to the rapid uplift event of

  14. Identification of hydrated silicate minerals on Mars using MRO-CRISM: Geologic context near Nili Fossae and implications for aqueous alteration

    USGS Publications Warehouse

    Ehlmann, B.L.; Mustard, J.F.; Swayze, G.A.; Clark, R.N.; Bishop, J.L.; Poulet, F.; Des Marais, D.J.; Roach, L.H.; Milliken, R.E.; Wray, J.J.; Barnouin-Jha, O.; Murchie, S.L.

    2009-01-01

    The Noachian terrain west of the Isidis basin hosts a diverse collection of alteration minerals in rocks comprising varied geomorphic units within a 100,000 km2 region in and near the Nili Fossae. Prior investigations in this region by the Observatoire pour l'Min??ralogie, l'Eau, les Glaces, et l'Activit?? (OMEGA) instrument on Mars Express revealed large exposures of both mafic minerals and iron magnesium phyllosilicates in stratigraphic context. Expanding on the discoveries of OMEGA, the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) aboard the Mars Reconnaissance Orbiter (MRO) has found more spatially widespread and mineralogically diverse alteration minerals than previously realized, which represent multiple aqueous environments. Using CRISM near-infrared spectral data, we detail the basis for identification of iron and magnesium smectites (including both nontronite and more Mg-rich varieties), chlorite, prehnite, serpentine, kaolinite, potassium mica (illite or muscovite), hydrated (opaline) silica, the sodium zeolite analcime, and magnesium carbonate. The detection of serpentine and analcime on Mars is reported here for the first time. We detail the geomorphic context of these minerals using data from high-resolution imagers onboard MRO in conjunction with CRISM. We find that the distribution of alteration minerals is not homogeneous; rather, they occur in provinces with distinctive assemblages of alteration minerals. Key findings are (1) a distinctive stratigraphy, in and around the Nili Fossae, of kaolinite and magnesium carbonate in bedrock units always overlying Fe/Mg smectites and (2) evidence for mineral phases and assemblages indicative of low-grade metamorphic or hydrothermal aqueous alteration in cratered terrains. The alteration minerals around the Nili Fossae are more typical of those resulting from neutral to alkaline conditions rather than acidic conditions, which appear to have dominated much of Mars. Moreover, the mineralogic

  15. Bleaching response of coral species in the context of assemblage response

    NASA Astrophysics Data System (ADS)

    Swain, Timothy D.; DuBois, Emily; Goldberg, Scott J.; Backman, Vadim; Marcelino, Luisa A.

    2017-06-01

    Caribbean coral reefs are declining due to a mosaic of local and global stresses, including climate change-induced thermal stress. Species and assemblage responses differ due to factors that are not easily identifiable or quantifiable. We calculated a novel species-specific metric of coral bleaching response, taxon- α and - β, which relates the response of a species to that of its assemblages for 16 species over 18 assemblages. By contextualizing species responses within the response of their assemblages, the effects of environmental factors are removed and intrinsic differences among taxa are revealed. Most corals experience either a saturation response, overly sensitive to weak stress ( α > 0) but under-responsive compared to assemblage bleaching ( β < 1), or a threshold response, insensitive to weak stress ( α < 0) but over-responsive compared to assemblage bleaching ( β > 1). This metric may help reveal key factors of bleaching susceptibility and identify species as targets for conservation.

  16. Bleaching response of coral species in the context of assemblage response.

    PubMed

    Swain, Timothy D; DuBois, Emily; Goldberg, Scott J; Backman, Vadim; Marcelino, Luisa A

    2017-06-01

    Caribbean coral reefs are declining due to a mosaic of local and global stresses, including climate change-induced thermal stress. Species and assemblage responses differ due to factors that are not easily identifiable or quantifiable. We calculated a novel species-specific metric of coral bleaching response, taxon-α and -β, which relates the response of a species to that of its assemblages for 16 species over 18 assemblages. By contextualizing species responses within the response of their assemblages, the effects of environmental factors are removed and intrinsic differences among taxa are revealed. Most corals experience either a saturation response, overly-sensitive to weak stress (α > 0) but under-responsive compared to assemblage bleaching (β < 1), or a threshold response, insensitive to weak stress (α < 0) but over-responsive compared to assemblage bleaching (β > 1). This metric may help reveal key factors of bleaching susceptibility and identify species as targets for conservation.

  17. Loss of functional diversity of ant assemblages in secondary tropical forests.

    PubMed

    Bihn, Jochen H; Gebauer, Gerhard; Brandl, Roland

    2010-03-01

    Secondary forests and plantations increasingly dominate the tropical wooded landscape in place of primary forests. The expected reduction of biodiversity and its impact on ecological functions provided by these secondary forests are of major concern to society and ecologists. The potential effect of biodiversity loss on ecosystem functioning depends largely on the associated loss in the functional diversity of animal and plant assemblages, i.e., the degree of functional redundancy among species. However, the relationship between species and functional diversity is still poorly documented for most ecosystems. Here, we analyze how changes in the species diversity of ground-foraging ant assemblages translate into changes of functional diversity along a successional gradient of secondary forests in the Atlantic Forest of Brazil. Our analysis uses continuous measures of functional diversity and is based on four functional traits related to resource use of ants: body size, relative eye size, relative leg length, and trophic position. We find a strong relationship between species and functional diversity, independent of the functional traits used, with no evidence for saturation in this relationship. Recovery of species richness and diversity of ant assemblages in tropical secondary forests was accompanied by a proportional increase of functional richness and diversity of assemblages. Moreover, our results indicate that the increase in functional diversity along the successional gradient of secondary forests is primarily driven by rare species, which are functionally unique. The observed loss of both species and functional diversity in secondary forests offers no reason to believe that the ecological functions provided by secondary forests are buffered against species loss through functional redundancy.

  18. Predicting the mineral composition of dust aerosols – Part 2: Model evaluation and identification of key processes with observations

    DOE PAGES

    Perlwitz, J. P.; Perez Garcia-Pando, C.; Miller, R. L.

    2015-10-21

    A global compilation of nearly sixty measurement studies is used to evaluate two methods of simulating the mineral composition of dust aerosols in an Earth system model. Both methods are based upon a Mean Mineralogical Table (MMT) that relates the soil mineral fractions to a global atlas of arid soil type. The Soil Mineral Fraction (SMF) method assumes that the aerosol mineral fractions match the fractions of the soil. The MMT is based upon soil measurements after wet sieving, a process that destroys aggregates of soil particles that would have been emitted from the original, undisturbed soil. The second methodmore » approximately reconstructs the emitted aggregates. This model is referred to as the Aerosol Mineral Fraction (AMF) method because the mineral fractions of the aerosols differ from those of the wet-sieved parent soil, partly due to reaggregation. The AMF method remedies some of the deficiencies of the SMF method in comparison to observations. Only the AMF method exhibits phyllosilicate mass at silt sizes, where they are abundant according to observations. In addition, the AMF quartz fraction of silt particles is in better agreement with measured values, in contrast to the overestimated SMF fraction. Measurements at distinct clay and silt particle sizes are shown to be more useful for evaluation of the models, in contrast to the sum over all particles sizes that is susceptible to compensating errors, as illustrated by the SMF experiment. Model errors suggest that allocation of the emitted silt fraction of each mineral into the corresponding transported size categories is an important remaining source of uncertainty. Evaluation of both models and the MMT is hindered by the limited number of size-resolved measurements of mineral content that sparsely sample aerosols from the major dust sources. In conclusion, the importance of climate processes dependent upon aerosol mineral composition shows the need for global and routine mineral measurements.« less

  19. Environmental stressors as a driver of the trait composition of benthic macroinvertebrate assemblages in polluted Iberian rivers.

    PubMed

    Kuzmanovic, Maja; Dolédec, Sylvain; de Castro-Catala, Nuria; Ginebreda, Antoni; Sabater, Sergi; Muñoz, Isabel; Barceló, Damià

    2017-07-01

    We used the trait composition of macroinvertebrate communities to identify the effects of pesticides and multiple stressors associated with urban land use at different sites of four rivers in Spain. Several physical and chemical stressors (high metal pollution, nutrients, elevated temperature and flow alterations) affected the urban sites. The occurrence of multiple stressors influenced aquatic assemblages at 50% of the sites. We hypothesized that the trait composition of macroinvertebrate assemblages would reflect the strategies that the assemblages used to cope with the respective environmental stressors. We used RLQ and fourth corner analysis to address the relationship between stressors and the trait composition of benthic macroinvertebrates. We found a statistically significant relationship between the trait composition and the exposure of assemblages to environmental stressors. The first RLQ dimension, which explained most of the variability, clearly separated sites according to the stressors. Urban-related stressors selected taxa that were mainly plurivoltine and fed on deposits. In contrast, pesticide impacted sites selected taxa with high levels of egg protection (better egg survival), indicating a potentially higher risk for egg mortality. Moreover, the trait diversity of assemblages at urban sites was low compared to that observed in pesticide impacted sites, suggesting the homogenization of assemblages in urban areas. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  20. Study of Hydrothermal Mineralization in 2013 Drill Core from Hawaii Island

    NASA Astrophysics Data System (ADS)

    Lautze, N. C.; Calvin, W. M.; Moore, J.; Haskins, E.; Thomas, D. M.

    2014-12-01

    The Humu'ula Groundwater Research Project (HGRP) drilled a continuously-cored hole to nearly 2 km depth near the Saddle Road between Mauna Loa and Mauna Kea volcanoes on Hawaii Island in March of 2013. Temperatures at the bottom of the hole were unexpectedly high and reached over 100 C. A study is underway to characterize hydrothermal (secondary) mineralization in the core at depths below ~ 1 km. Secondary mineralization can indicate the presence, chemistry, and temperature of hydrothermal fluids, therein helping to characterize a present and/or past geothermal system. To date, the study is two pronged. In collaboration with University Nevada Reno (UNR) we used an Analytical Spectral Devices (ASD) FieldSpec instrument to obtain nearly 800 spectra from core depths spanning 3190 to 5785 feet. This device has a 2 cm contact probe that measures from 0.4 to 2.5 mm, and has been used successfully by UNR to identify depth-associated changes in alteration mineralogy and zoning in drill core from other pilot studies. The spectra indicate that rocks above a depth of ~1 km are only weakly altered. At greater depths to the base of the well, chlorite, possibly with some mica, and zeolites are common. The majority of zeolites are spectrally similar to each other at these wavelengths, however analcime and natrolite are uniquely identified in some sections. Epidote was not observed. The secondary mineral assemblages suggest that the alteration was produced by moderate temperature neutral pH fluids. Here, we used the spectral data as a survey tool to help identify and select over 20 sections of core for sampling and more detailed mineralogical analysis using traditional X-Ray Diffraction (XRD) and petrographic techniques, conducted in collaboration with University of Utah. This presentation will include mineral maps with depth and results of the petrographic analyses.

  1. Determinants of fish assemblage structure in Northwestern Great Plains streams

    USGS Publications Warehouse

    Mullen, J.A.; Bramblett, R.G.; Guy, C.S.; Zale, A.V.; Roberts, D.W.

    2011-01-01

    Prairie streams are known for their harsh and stochastic physical conditions, and the fish assemblages therein have been shown to be temporally variable. We assessed the spatial and temporal variation in fish assemblage structure in five intermittent, adventitious northwestern Great Plains streams representing a gradient of watershed areas. Fish assemblages and abiotic conditions varied more spatially than temporally. The most important variables explaining fish assemblage structure were longitudinal position and the proportion of fine substrates. The proportion of fine substrates increased proceeding upstream, approaching 100% in all five streams, and species richness declined upstream with increasing fine substrates. High levels of fine substrate in the upper reaches appeared to limit the distribution of obligate lithophilic fish species to reaches further downstream. Species richness and substrates were similar among all five streams at the lowermost and uppermost sites. However, in the middle reaches, species richness increased, the amount of fine substrate decreased, and connectivity increased as watershed area increased. Season and some dimensions of habitat (including thalweg depth, absolute distance to the main-stem river, and watershed size) were not essential in explaining the variation in fish assemblages. Fish species richness varied more temporally than overall fish assemblage structure did because common species were consistently abundant across seasons, whereas rare species were sometimes absent or perhaps not detected by sampling. The similarity in our results among five streams varying in watershed size and those from other studies supports the generalization that spatial variation exceeds temporal variation in the fish assemblages of prairie and warmwater streams. Furthermore, given longitudinal position, substrate, and stream size, general predictions regarding fish assemblage structure and function in prairie streams are possible. ?? American

  2. Simmonsite, Na2LiAlF6, a new mineral from the Zapot amazonite-topazzinnwaldite pegmatite, Hawthorne, Nevada, U.S.A

    USGS Publications Warehouse

    Foord, E.E.; O'Connor, J. T.; Hughes, J.M.; Sutley, S.J.; Falster, A.U.; Soregaroli, A.E.; Lichte, F.E.; Kile, D.E.

    1999-01-01

    Simmonsite, Na2LiAlF6, a new mineral of pegmatitic-hydrothermal origin, occurs in a late-stage breccia pipe structure that cuts the Zapot amazonite-topaz-zinnvvaldite pegmatite located in the Gillis Range, Mineral Co., Nevada, U.S.A. The mineral is intimately intergrown with cryolite, cryolithionite and trace elpasolite. A secondary assemblage of other alumino-fluoride minerals and a second generation of cryolithionite has formed from the primary assemblage. The mineral is monoclinic, P21 or P21/m, a = 7.5006(6) A??, b = 7.474(1) A??, c = 7.503(1) A??, ??= 90.847(9) ??, V=420.6(1) A??3, Z = 4. The four strongest diffraction maxima [d(A??), likl, I/I100] are (4.33, 111 and 111, 100); (1.877, 400 and 004, 90); (2.25, 13T, 113, 131 and 311, 70); and (2.65, 220, 202, 022, 60). Simmonsite is pale buff cream with white streak, somewhat greasy, translucent to transparent, Mohs hardness of 2.5-3, no distinct cleavage, subconchoidal fracture, no parting, not extremely brittle, Dm is 3.05(2) g/cm3, and Dc is 3.06(1) g/cm3. The mineral is biaxial, very nearly Isotropie, N is 1.359(1) for ?? = 589 nm, and birefringence is 0.0009. Electron microprobe analyses gave (wt%) Na = 23.4, Al = 13.9, F = 58.6, Li = 3.56 (calculated), with a total of 99.46. The empirical formula (based on 6 F atoms) is Na1.98Li1.00 ooAl|ooF6. The crystal structure was not solved, presumably because of unit-cell scale twinning, but similarities to the perovskite-type structure exist. The mineral is named for William B. Simmons, Professor of Mineralogy and Petrology, University of New Orleans, New Orleans.

  3. Formation of recent Pb-Ag-Au mineralization by potential sub-surface microbial activity

    NASA Astrophysics Data System (ADS)

    Tornos, Fernando; Velasco, Francisco; Menor-Salván, César; Delgado, Antonio; Slack, John F.; Escobar, Juan Manuel

    2014-08-01

    Las Cruces is a base-metal deposit in the Iberian Pyrite Belt, one of the world’s best-known ore provinces. Here we report the occurrence of major Pb-Ag-Au mineralization resulting from recent sub-surface replacement of supergene oxyhydroxides by carbonate and sulphide minerals. This is probably the largest documented occurrence of recent microbial activity producing an ore assemblage previously unknown in supergene mineralizing environments. The presence of microbial features in the sulphides suggests that these may be the first-described natural bacteriomorphs of galena. The low δ13C values of the carbonate minerals indicate formation by deep anaerobic microbial processes. Sulphur isotope values of sulphides are interpreted here as reflecting microbial reduction in a system impoverished in sulphate. We suggest that biogenic activity has produced around 3.1 × 109 moles of reduced sulphur and 1010 moles of CO2, promoting the formation of ca. 1.19 Mt of carbonates, 114,000 t of galena, 638 t of silver sulphides and 6.5 t of gold.

  4. Biogenic Weathering: Solubilization of Iron from Minerals by Epilithic Freshwater Algae and Cyanobacteria

    PubMed Central

    2018-01-01

    A sandstone outcrop exposed to freshwater seepage supports a diverse assemblage of photosynthetic microbes. Dominant taxa are two cyanophytes (Oscillatoria sp., Rivularia sp.) and a unicellular green alga (Palmellococcus sp.). Less abundant taxa include a filamentous green alga, Microspora, and the desmid Cosmarium. Biologic activity is evidenced by measured levels of chlorophyll and lipids. Bioassay methods confirm the ability of these microbes to dissolve and metabolize Fe from ferruginous minerals. Chromatographic analysis reveals citric acid as the likely chelating agent; this low molecular weight organic acid is detectable in interstitial fluid in the sandstone, measured as 0.0756 mg/mL. Bioassays using a model organism, Synechoccus elongates strain UTEX 650, show that Fe availability varies among different ferruginous minerals. In decreasing order of Fe availability: magnetite > limonite > biotite > siderite > hematite. Biotite was selected for detailed study because it is the most abundant iron-bearing mineral in the sandstone. SEM images support the microbiologic evidence, showing weathering of biotite compared to relatively undamaged grains of other silicate minerals. PMID:29342973

  5. The Fish Assemblage of a Newfoundland Estuary: Diel, Monthly and Annual Variation

    NASA Astrophysics Data System (ADS)

    Methven, D. A.; Haedrich, R. L.; Rose, G. A.

    2001-06-01

    Twice monthly sampling over two 16 month periods at a shallow site on Newfoundland's east coast showed the fish assemblage to be dominated by four taxa ( Gasterosteus aculeatus, G. wheatlandi, Osmerus mordax, Gadus spp.) that accounted for 96% of the individuals collected. Of the 16 479 fish measured, 65% were adults based on the estimated size of first spawning. The fish assemblage was dominated (86%) by species with demersal eggs, several of which spawn at the same shallow sites used by juveniles as nursery sites. Coastal spawning and demersal eggs maintain offspring in coastal nursery areas where survival is thought to be increased. Number of species and number of fish were both correlated with water temperature being highest from mid-summer to early autumn and lowest in winter. Temperature, time of spawning, and movements of juveniles and adults facilitated grouping species into five assemblages based on seasonal abundance: seasonal periodic species (summer and winter), regular species, regular species collected in all seasons except winter, and occasional (rare) species. At the diel scale, two consistent species groupings were observed: species that showed no significant difference between day and night and species caught primarily at night. Number of night species exceeded day species by a factor of two. No seine-caught species in shallow water exhibited significantly higher catches during the day. Observations by SCUBA divers indicated some species were more abundant during day time at slightly deeper depths. This observation in conjunction with day and night seining in shallower water, suggests these species aggregate in deeper water during day and move to shallow waters at night.

  6. Unionid habitat and assemblage composition in coastal plain tributaries of the Flint River (Georgia)

    USGS Publications Warehouse

    Gagnon, P.; Michener, W.; Freeman, M.; Brim-Box, J.

    2006-01-01

    Effective conservation of mussels in streams of the lower Flint River basin, southwest Georgia, requires more rigorous understanding of mussel-habitat associations and factors shaping assemblage composition in stream reaches. We surveyed mussels and habitat conditions at 46 locations, and used regression, correlation and multivariate direct gradient analysis (Canonical Correspondence Analyses) to identify species-habitat relationships and characteristic species-assemblage types in Flint basin streams. Riparian wetland and catchment forest cover, average mid-channel depth, and drainage network position accounted for 49% of the variability in mussel species richness, 36% of the variability in unionid abundance, and 32% of the variability observed in Shannon-Wiener diversity across survey sites. Species were grouped into four assemblage types based on their habitat associations: large-river-riffle associates, slackwater associates, habitat generalists, and stream-run associates. Results are broadly concordant with anecdotal reports of mussel-habitat relationships and provide insight into the habitat conservation needs of mussels.

  7. A granulometry and secondary mineral fingerprint of chemical weathering in periglacial landscapes and its application to blockfield origins

    NASA Astrophysics Data System (ADS)

    Goodfellow, Bradley W.

    2012-12-01

    mineral assemblages vary according to regolith residence time, temperature, and/or precipitation. A microsystems model is invoked as a conceptual framework in which to interpret the concurrent formation of the observed secondary mineral ranges. According to the fingerprint of chemical weathering in periglacial landscapes, there is generally no evidence of blockfield origins under warm Neogene climates. Nearly all blockfields appear to be a product of Quaternary physical and chemical weathering. A more dominant role for periglacial processes in further bevelling elevated, low relief, non-glacial surface remnants in otherwise glacially eroded landscapes is therefore indicated.

  8. Ichthyoplankton assemblages of coastal west-central Lake Erie and associated habitat characteristics

    USGS Publications Warehouse

    McKenna, J.E.; Hunter, R. Douglas; Fabrizio, M.C.; Savino, J.F.; Todd, T.N.; Bur, M.

    2008-01-01

    Early life stage survival often determines fish cohort strength and that survival is affected by habitat conditions. The structure and dynamics of ichthyoplankton assemblages can tell us much about biodiversity and fish population dynamics, but are poorly understood in nearshore areas of the Great Lakes, where most spawning and nursery habitats exist. Ichthyoplankton samples were collected with a neuston net in waters 2-13 m deep weekly or biweekly from mid-April through August, during 3 years (2000-2002) as part of a study of fish assemblages in west-central Lake Erie. A suite of abiotic variables was simultaneously measured to characterize habitat. Cluster and ordination analyses revealed several distinct ichthyoplankton assemblages that changed seasonally. A lake whitefish (Coregonus clupeaformis) dominated assemblage appeared first in April. In May, assemblages were dominated by several percid species. Summer assemblages were overwhelmingly dominated by emerald shiner (Notropis atherinoides), with large gizzard shad (Dorosoma cepedianum) and alewife (Alosa pseudoharengus) components. This seasonal trend in species assemblages was also associated with increasing temperature and water clarity. Water depth and drift processes may also play a role in structuring these assemblages. The most common and widely distributed assemblages were not associated with substratum type, which we characterized as either hard or soft. The timing of hatch and larval growth separated the major groups in time and may have adaptive significance for the members of each major assemblage. The quality and locations (with reference to lake circulation) of spawning and nursery grounds may determine larval success and affect year class strength.

  9. Phylogenetic patterns of climatic, habitat and trophic niches in a European avian assemblage

    PubMed Central

    Pearman, Peter B; Lavergne, Sébastien; Roquet, Cristina; Wüest, Rafael; Zimmermann, Niklaus E; Thuiller, Wilfried

    2014-01-01

    Aim The origins of ecological diversity in continental species assemblages have long intrigued biogeographers. We apply phylogenetic comparative analyses to disentangle the evolutionary patterns of ecological niches in an assemblage of European birds. We compare phylogenetic patterns in trophic, habitat and climatic niche components. Location Europe. Methods From polygon range maps and handbook data we inferred the realized climatic, habitat and trophic niches of 405 species of breeding birds in Europe. We fitted Pagel's lambda and kappa statistics, and conducted analyses of disparity through time to compare temporal patterns of ecological diversification on all niche axes together. All observed patterns were compared with expectations based on neutral (Brownian) models of niche divergence. Results In this assemblage, patterns of phylogenetic signal (lambda) suggest that related species resemble each other less in regard to their climatic and habitat niches than they do in their trophic niche. Kappa estimates show that ecological divergence does not gradually increase with divergence time, and that this punctualism is stronger in climatic niches than in habitat and trophic niches. Observed niche disparity markedly exceeds levels expected from a Brownian model of ecological diversification, thus providing no evidence for past phylogenetic niche conservatism in these multivariate niches. Levels of multivariate disparity are greatest for the climatic niche, followed by disparity of the habitat and the trophic niches. Main conclusions Phylogenetic patterns in the three niche components differ within this avian assemblage. Variation in evolutionary rates (degree of gradualism, constancy through the tree) and/or non-random macroecological sampling probably lead here to differences in the phylogenetic structure of niche components. Testing hypotheses on the origin of these patterns requires more complete phylogenetic trees of the birds, and extended ecological data on

  10. Alteration assemblages in the Miller Range and Elephant Moraine regions of Antarctica: Comparisons between terrestrial igneous rocks and Martian meteorites

    NASA Astrophysics Data System (ADS)

    Hallis, L. J.

    2013-02-01

    The weathering products present in igneous terrestrial Antarctic samples were analyzed, and compared with those found in the four Miller Range nakhlite Martian meteorites. The aim of these comparisons was to determine which of the alteration phases in the Miller Range nakhlites are produced by terrestrial weathering, and what effect rock composition has on these phases. Antarctic terrestrial samples MIL 05031 and EET 96400, along with the Miller Range nakhlites MIL 03346 and 090032, were found to contain secondary alteration assemblages at their externally exposed surfaces. Despite the difference in primary mineralogy, the assemblages of these rocks consist mostly of sulfates (jarosite in MIL 05031, jarosite and gypsum in EET 96400) and iddingsite-like Fe-clay. As neither of the terrestrial samples contains sulfur-bearing primary minerals, and these minerals are rare in the Miller Range nakhlites, it appears that SO42-, possibly along with some of the Na+, K+, and Ca+ in these phases, was sourced from wind-blown sea spray and biogenic emissions from the southern ocean. Cl enrichment in the terrestrially derived "iddingsite" of MIL 05031 and MIL 03346, and the presence of halite at the exterior edge of MIL 090032, can also be explained by this process. However, jarosite within and around the olivine-bound melt inclusions of MIL 090136 is present in the interior of the meteorite and, therefore, is probably the product of preterrestrial weathering on Mars.

  11. Giardiasis in NSW: Identification of Giardia duodenalis assemblages contributing to human and cattle cases, and an epidemiological assessment of sporadic human giardiasis.

    PubMed

    Asher, A J; Hose, G; Power, M L

    2016-10-01

    Two genetic assemblages (A and B) of the protozoan parasite species, Giardia duodenalis, infect humans, domestic animals and wildlife. In New South Wales, Australia, over 2000 sporadic human giardiasis cases are reported annually, but parasite sources and links between sporadic cases are unknown. This study describes G. duodenalis assemblages contributing to human and cattle cases in NSW, and examines demographic, spatial, and temporal distributions of NSW human infections and G. duodenalis assemblages. Genotyping by PCR-restriction fragment length polymorphism of the glutamate dehydrogenase (gdh) gene identified G. duodenalis assemblage B as the most common (86%) cause of infection among human cases (n=165). Approximately 37% of cattle DNA samples were PCR positive (18S rRNA, gdh), and G. duodenalis assemblages E (69%) or B (31%) were identified from these samples. Human assemblage A was more common among older age groups, and seasonality in the geographic dispersal of human assemblage A was observed. The results of this study indicate G. duodenalis assemblage B is highly prevalent among humans in NSW, and the potential for cross-species transmission exists between humans and cattle in this region. Spatio-temporal and demographic distributions of human assemblage A and B are highlighted, and risk factors associated with these dispersal patterns warrants further research. Copyright © 2016 Elsevier B.V. All rights reserved.

  12. Terroir is a key driver of seed-associated microbial assemblages.

    PubMed

    Klaedtke, Stephanie; Jacques, Marie-Agnès; Raggi, Lorenzo; Préveaux, Anne; Bonneau, Sophie; Negri, Valeria; Chable, Véronique; Barret, Matthieu

    2016-06-01

    Seeds have evolved in association with diverse microbial assemblages that may influence plant growth and health. However, little is known about the composition of seed-associated microbial assemblages and the ecological processes shaping their structures. In this work, we monitored the relative influence of the host genotypes and terroir on the structure of the seed microbiota through metabarcoding analysis of different microbial assemblages associated to five different bean cultivars harvested in two distinct farms. Overall, few bacterial and fungal operational taxonomic units (OTUs) were conserved across all seed samples. The lack of shared OTUs between samples is explained by a significant effect of the farm site on the structure of microbial assemblage, which explained 12.2% and 39.7% of variance in bacterial and fungal diversity across samples. This site-specific effect is reflected by the significant enrichment of 70 OTUs in Brittany and 88 OTUs in Luxembourg that lead to differences in co-occurrence patterns. In contrast, variance in microbial assemblage structure was not explained by host genotype. Altogether, these results suggest that seed-associated microbial assemblage is determined by niche-based processes and that the terroir is a key driver of these selective forces. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  13. Larval fish assemblages across an upwelling front: Indication for active and passive retention

    NASA Astrophysics Data System (ADS)

    Tiedemann, Maik; Brehmer, Patrice

    2017-03-01

    In upwelling areas, enrichment, concentration and retention are physical processes that have major consequences for larval fish survival. While these processes generally increase larval survival, strong upwelling can also increase mortality due to an offshore transport of larvae towards unfavorable habitats. In 2013 a survey was conducted along the Senegalese coast to investigate the upwelling effect with regard to larval fish assemblages and possible larval fish retention. According to water column characteristics two distinct habitats during an upwelling event were discriminated, i.e. the inshore upwelled water and the transition area over the deepest part of the Senegalese shelf. Along the two areas 42,162 fish larvae were collected representing 133 species within 40 families. Highest larval fish abundances were observed in the inshore area and decreasing abundances towards the transition, indicating that certain fish species make use of the retentive function of the inner shelf area as spawning grounds. Two larval fish assemblages overlap both habitats, which are sharply delimited by a strong upwelling front. One assemblage inhabited the inshore/upwelling area characterized by majorly neritic and pelagic species (Sparidae spp., Sardinella aurita), that seem to take the advantage of a passive retention on the shelf. The second assemblage consisted of a mix of pelagic and mesopelagic species (Engraulis encrasicolus, Carangidae spp. and Myctophidae spp.). Some species of the second assemblage, e.g. horse mackerels (Trachurus trachurus and Trachurus trecae), large finned-lantern fish (Hygophum macrochir) and foureyed sole (Microchirus ocellatus), revealed larval peak occurrences at intermediate and deep water layers, where the near-ground upwelling layer is able to transport larvae back to the shelf. This indicates active larval retention for species that are dominant in the transition area. Diel vertical migration patterns of S. aurita, E. encrasicolus and M

  14. Magmatic anhydrite and calcite in the ore-forming quartz-monzodiorite magma at Santa Rita, New Mexico (USA): genetic constraints on porphyry-Cu mineralization

    NASA Astrophysics Data System (ADS)

    Audétat, A.; Pettke, T.; Dolejš, D.

    2004-02-01

    A quartz-monzodioritic dike associated with the porphyry-Cu mineralized stock at Santa Rita, NM, has been studied to constrain physico-chemical factors ( P, T, fO 2, and volatile content) responsible for mineralization. The dike contains a low-variance mineral assemblage of amphibole, plagioclase (An 30-50), quartz, biotite, sphene, magnetite, and apatite, plus anhydrite and calcite preserved as primary inclusions within the major phenocryst phases. Petrographic relationships demonstrate that anhydrite originally was abundant in the form of phenocrysts (1-2 vol.%), but later was replaced by either quartz or calcite. Hornblende-plagioclase thermobarometry suggests that several magmas were involved in the formation of the quartz-monzodiorite, with one magma having ascended directly from ≥14 km depth. Rapid magma ascent is supported by the presence of intact calcite inclusions within quartz phenocrysts. The assemblage quartz+sphene+magnetite+Mg-rich amphibole in the quartz-monzodiorite constrains magmatic oxygen fugacity at log fO 2>NNO+1, in agreement with the presence of magmatic anhydrite and a lack of magmatic sulfides. The same reasoning generally applies for rocks hosting porphyry-Cu deposits, seemingly speaking against a major role of magmatic sulfides in the formation of such mineralizations. There is increasing evidence, however, that magmatic sulfides play an important role in earlier stages of porphyry-Cu evolution, the record of which is often obliterated by later processes.

  15. Effects of hydrologic connectivity on aquatic macroinvertebrate assemblages in different marsh types

    USGS Publications Warehouse

    Kang, Sung-Ryong; King, Sammy L.

    2013-01-01

    Hydrologic connectivity can be an important driver of aquatic macroinvertebrate assemblages. Its effects on aquatic macroinvertebrate assemblages in coastal marshes, however, are relatively poorly studied. We evaluated the effects of lateral hydrologic connectivity (permanently connected ponds: PCPs; temporary connected ponds: TCPs), and other environmental variables on aquatic macroinvertebrate assemblages and functional feeding groups (FFGs) in freshwater, brackish, and saline marshes in Louisiana, USA. We hypothesized that (1) aquatic macroinvertebrate assemblages in PCPs would have higher assemblage metric values (density, biomass, Shannon-Wiener diversity) than TCPs and (2) the density and proportional abundance of certain FFGs (i.e. scrapers, shredders, and collectors) would be greater in freshwater marsh than brackish and saline marshes. The data in our study only partially supported our first hypothesis: while freshwater marsh PCPs had higher density and biomass than TCPs, assemblage metric values in saline TCPs were greater than saline PCPs. In freshwater TCPs, long duration of isolation limited access of macroinvertebrates from adjacent water bodies, which may have reduced assemblage metric values. However, the relatively short duration of isolation in saline TCPs provided more stable or similar habitat conditions, facilitating higher assemblage metric values. As predicted by our second hypothesis, freshwater PCPs and TCPs supported a greater density of scrapers, shredders, and collectors than brackish and saline ponds. Aquatic macroinvertebrate assemblages seem to be structured by individual taxa responses to salinity as well as pond habitat attributes.

  16. Excess density compensation of island herpetofaunal assemblages

    USGS Publications Warehouse

    Rodda, G.H.; Dean-Bradley, K.

    2002-01-01

    Aim Some species reach extraordinary densities on islands. Island assemblages have fewer species, however, and it is possible that island species differ from their mainland counterparts in average mass. Island assemblages could be partitioned differently (fewer species or smaller individuals) from mainland sites without differing in aggregate biomass (density compensation). Our objective was to determine the generality of excess density compensation in island herpetofaunal assemblages.Location Our bounded removal plot data were obtained from Pacific Island sites (Guam, Saipan and Rota), the West Indies (British Virgin Islands), and the Indian Ocean (Ile aux Aigrettes off Mauritius). The literature values were taken from several locales. Other island locations included Barro Colorado Island, Bonaire, Borneo, Philippine Islands, Seychelle Islands, Barrow Island (Australia), North Brother Island (New Zealand), Dominica and Puerto Rico. Mainland sites included Costa Rica, Ivory Coast, Cameroon, Australia, Thailand, Peru, Brazil, Panama and the USA.Method We added our thirty-nine bounded total removal plots from sixteen island habitats to fifteen literature records to obtain seventy-five venues with estimable density and biomass of arboreal or terrestrial herpetofaunal assemblages. These biomass estimates were evaluated geographically and in relation to sampling method, insularity, latitude, disturbance regime, seasonality, community richness, vegetative structure and climate. Direct data on trophic interactions (food availability, parasitism and predation pressure) were generally unavailable. Sampling problems were frequent for arboreal, cryptic and evasive species.Results and main conclusions We found strong evidence that herpetofaunal assemblages on small islands (mostly lizards) exhibit a much greater aggregate density of biomass (kg ha−1) than those of larger islands or mainland assemblages (small islands show excess density compensation). High aggregate biomass

  17. Bimodal Silurian and Lower Devonian volcanic rock assemblages in the Machias-Eastport area, Maine

    USGS Publications Warehouse

    Gates, Olcott; Moench, R.H.

    1981-01-01

    titanium and poorer in magnesium and nickel than the Silurian basalts; and the Eastport Formation has rhyolites and silicic dacites that have higher average SiO2 and K2O contents and higher ratios of FeO* to MgO than the Silurian ones. The younger Devonian assemblage is represented by one sample of basalt from a flow in red beds of the post-Acadian Upper Devonian Perry Formation, and by three samples from pre-Acadian diabases that intrude the Leighton and Hersey Formations. These rocks are even richer in titanium and iron and poorer in magnesium and nickel than the older Devonian basalts. Post-Acadian granitic plutons exposed along the coastal belt for which analyses are available are tentatively included in the younger Devonian assemblage. The most conspicuous features of the coastal volcanics and associated intrusives are the preponderance of rocks of basaltic composition ( < 52 percent SiO2 ) in the Silurian assemblage, and the near absence in all assemblages of intermediate rocks having 57-67 percent SiO2 (calculated without volatiles). All the rocks are variably altered spilites and keratophyres. The basaltic types are adequately defined, however, by eight samples of least altered basalts having calcic plagioclase, clinopyroxene, and 0.5 percent or less CO2 , The more altered basalts are variably enriched or depleted in Na2O, K2O, and CaO relative to the least altered ones. In the silicic rocks no primary ferromagnesian minerals are preserved. The Na2O and K2O contents of the silicic rocks are erratic; they are approximately reciprocal, possibly owing to alkali exchange while the rocks were still glassy. We propose that the coastal volcanic belt extended along an axis of thermal swelling in the Earth's mantle and upward intrusion of partially melted mantle into the sialic Avalonian crust. These processes were accompanied by shoaling and emergence of the belt, and they produced the bimodal volcanism. Tholeiitic basaltic melts segregated from mantle material

  18. Simple processes drive unpredictable differences in estuarine fish assemblages: Baselines for understanding site-specific ecological and anthropogenic impacts

    NASA Astrophysics Data System (ADS)

    Sheaves, Marcus

    2016-03-01

    Predicting patterns of abundance and composition of biotic assemblages is essential to our understanding of key ecological processes, and our ability to monitor, evaluate and manage assemblages and ecosystems. Fish assemblages often vary from estuary to estuary in apparently unpredictable ways, making it challenging to develop a general understanding of the processes that determine assemblage composition. This makes it problematic to transfer understanding from one estuary situation to another and therefore difficult to assemble effective management plans or to assess the impacts of natural and anthropogenic disturbance. Although system-to-system variability is a common property of ecological systems, rather than being random it is the product of complex interactions of multiple causes and effects at a variety of spatial and temporal scales. I investigate the drivers of differences in estuary fish assemblages, to develop a simple model explaining the diversity and complexity of observed estuary-to-estuary differences, and explore its implications for management and conservation. The model attributes apparently unpredictable differences in fish assemblage composition from estuary to estuary to the interaction of species-specific, life history-specific and scale-specific processes. In explaining innate faunal differences among estuaries without the need to invoke complex ecological or anthropogenic drivers, the model provides a baseline against which the effects of additional natural and anthropogenic factors can be evaluated.

  19. Effects of a brine discharge over soft bottom Polychaeta assemblage.

    PubMed

    Del-Pilar-Ruso, Yoana; De-la-Ossa-Carretero, Jose Antonio; Giménez-Casalduero, Francisca; Sánchez-Lizaso, Jose Luis

    2008-11-01

    Desalination is a growing activity that has introduced a new impact, brine discharge, which may affect benthic communities. Although the role of polychaetes as indicators to assess organic pollution is well known, their tolerance to salinity changes has not been examined to such a great extent. The aim of this study was to examine the effect of brine discharge over soft bottom polychaete assemblage along the Alicante coast (Southeast Spain) over a two year period. Changes in the polychaete assemblage was analysed using univariate and multivariate techniques. We compared a transect in front of the discharge with two controls. At each transect we sampled at three depths (4, 10 and 15 m) during winter and summer. We have observed different sensitivity of polychaete families to brine discharges, Ampharetidae being the most sensitive, followed by Nephtyidae and Spionidae. Syllidae and Capitellidae showed some resistance initially, while Paraonidae proved to be a tolerant family.

  20. Magmatism, metasomatism, tectonism, and mineralization in the Humboldt Range, Pershing County, Nevada

    USGS Publications Warehouse

    Vikre, Peter

    2014-01-01

    Introduction The Humboldt Range, Pershing County, Nevada, predominantly consists of Mesozoic igneous and sedimentary rocks that were modified several times by magmatism, metasomatism, and tectonism, and contain a variety of metallic (Ag, Au, Pb, Zn, Sb, W, Hg) and non-metallic (dumortierite, pinite, fluorite) mineral deposits (Knopf, 1924; Kerr and Jenney, 1935; Kerr, 1938; Cameron, 1939; Campbell, 1939; Kerr, 1940; Page et al., 1940; Johnson, 1977; Vikre, 1978; 1981; Crosby, 2012). Early Triassic Koipato Group volcanic rocks, which are widely exposed in the range, have been altered to quartz, muscovite (sericite), chlorite, pyrite, and other minerals during emplacement of Mesozoic intrusions and by crustal thickening. Most hydrothermal alteration of volcanic rocks and formation of mineral deposits involved externally derived water and other volatiles, although some volcanic strata were apparently altered by pore or dehydration water. Cospatial hydrothermal mineral assemblages and associations, produced by events widely spaced in time, are difficult to separate because of common mineralogy (quartz, sericite, and pyrite), partial to complete recrystallization, thermally compromised Ar geochronology, and lack of comprehensive investigations of volatile sources and deformational fabric. Distinguishing between metasomatic and metamorphic processes that affected rocks in the Humboldt Range is not straightforward.

  1. Isotopic characteristics of canopies in simulated leaf assemblages

    NASA Astrophysics Data System (ADS)

    Graham, Heather V.; Patzkowsky, Mark E.; Wing, Scott L.; Parker, Geoffrey G.; Fogel, Marilyn L.; Freeman, Katherine H.

    2014-11-01

    The geologic history of closed-canopy forests is of great interest to paleoecologists and paleoclimatologists alike. Closed canopies have pronounced effects on local, continental and global rainfall and temperature patterns. Although evidence for canopy closure is difficult to reconstruct from the fossil record, the characteristic isotope gradients of the ;canopy effect; could be preserved in leaves and proxy biomarkers. To assess this, we employed new carbon isotopic data for leaves collected in diverse light environments within a deciduous, temperate forest (Maryland, USA) and for leaves from a perennially closed canopy, moist tropical forest (Bosque Protector San Lorenzo, Panamá). In the tropical forest, leaf carbon isotope values range 10‰, with higher δ13Cleaf values occurring both in upper reaches of the canopy, and with higher light exposure and lower humidity. Leaf fractionation (Δleaf) varied negatively with height and light and positively with humidity. Vertical 13C enrichment in leaves largely reflects changes in Δleaf, and does not trend with δ13C of CO2 within the canopy. At the site in Maryland, leaves express a more modest δ13C range (∼6‰), with a clear trend that follows both light and leaf height. Using a model we simulate leaf assemblage isotope patterns from canopy data binned by elevation. The re-sampling (bootstrap) model determined both the mean and range of carbon isotope values for simulated leaf assemblages ranging in size from 10 to over 1000 leaves. For the tropical forest data, the canopy's isotope range is captured with 50 or more randomly sampled leaves. Thus, with a sufficient number of fossil leaves it is possible to distinguish isotopic gradients in an ancient closed canopy forest from those in an open forest. For very large leaf assemblages, mean isotopic values approximate the δ13C of carbon contributed by leaves to soil and are similar to observed δ13Clitter values at forested sites within Panamá, including the

  2. Effects of land use intensification on fish assemblages in Mediterranean climate streams.

    PubMed

    Matono, P; Sousa, D; Ilhéu, M

    2013-11-01

    Southern Portugal is experiencing a rapid change in land use due to the spread of intensive farming systems, namely olive production systems, which can cause strong negative environmental impacts and affect the ecological integrity of aquatic ecosystems. This study aimed to identify the main environmental disturbances related with olive grove intensification on Mediterranean-climate streams in southern Portugal, and to evaluate their effects on fish assemblage structure and integrity. Twenty-six stream sites within the direct influence of traditional, intensive, and hyper-intensive olive groves were sampled. Human-induced disturbances were analyzed along the olive grove intensity gradient. The integrity of fish assemblages was evaluated by comparison with an independent set of least disturbed reference sites, considering metrics and guilds, based on multivariate analyses. Along the gradient of olive grove intensification, the study observed overall increases in human disturbance variables and physicochemical parameters, especially organic/nutrient enrichment, sediment load, and riparian degradation. Animal load measured the impact of livestock production. This variable showed an opposite pattern, since traditional olive groves are often combined with high livestock production and are used as grazing pasture by the cattle, unlike more intensive olive groves. Stream sites influenced by olive groves were dominated by non-native and tolerant fish species, while reference sites presented higher fish richness, density and were mainly occupied by native and intolerant species. Fish assemblage structure in olive grove sites was significantly different from the reference set, although significant differences between olive grove types were not observed. Bray-Curtis similarities between olive grove sites and references showed a decreasing trend in fish assemblage integrity along the olive grove intensification gradient. Olive production, even in traditional groves, led to

  3. Geology, mineralization, and fluid inclusion characteristics of the Skrytoe reduced-type W skarn and stockwork deposit, Sikhote-Alin, Russia

    NASA Astrophysics Data System (ADS)

    Soloviev, Serguei G.; Kryazhev, Sergey G.

    2017-08-01

    The Skrytoe deposit (>145 Kt WO3, average grade 0.449% WO3) in the Sikhote-Alin orogenic system (Eastern Russia) is situated in a metallogenic belt of W, Sn-W, Au, and Au-W deposits formed in a late to post-collisional tectonic environment after cessation of active subduction. It is localized within a mineralized district of reduced-type skarn W and veined Au (±W) deposits and occurrences related to the Early Cretaceous ilmenite-series plutonic suite. The deposit incorporates large stockworks of scheelite-bearing veinlets related to propylitic (amphibole, chlorite, quartz) and phyllic (quartz, sericite, albite, apatite, and carbonate) hydrothermal alteration. The stockwork cuts flat-lying mafic volcanic rocks and limestone partially replaced by pyroxene skarn that host the major W orebodies. Scheelite is associated with pyrrhotite and/or arsenopyrite, with minor chalcopyrite and other sulfide minerals; the late phyllic stage assemblages hosts Bi and Au mineralization. The fluid evolution included low-salinity moderate-temperature, moderate-pressure (˜370-390 °C, ˜800 bars) methane-dominated carbonic-aqueous fluids that formed post-skarn propylitic alteration assemblages. Then, at the phyllic stage, there has been an evolution from methane-dominated, moderate-temperature (330-360 °C), low-salinity (<12.3 wt% NaCl equiv.) fluids forming the early quartz-sericite-albite-arsenopyrite assemblage, through lower temperature (290-330 °C) methane-dominated, low-salinity (˜9-10 wt% NaCl equiv.) fluids forming the intermediate quartz-sericite-albite-scheelite-pyrrhotite assemblage, to yet lower temperature (245-320 °C) CO2-dominated carbonic-aqueous low-salinity (˜1-7 wt% NaCl equiv.) fluids forming the late quartz-sericite-sulfide-Bi-Au assemblage. Recurrent fluid immiscibility (phase separation) and cooling probably affected W solubility and promoted scheelite deposition. The stable isotope data support a sedimentary source of carbon (δ13Cfluid = ˜-21 to -10

  4. Black liquor and the hangover effect: fish assemblage recovery dynamics following a pulse disturbance

    PubMed Central

    Piller, Kyle R; Geheber, Aaron D

    2015-01-01

    Anthropogenic perturbations impact aquatic systems causing wide-ranging responses, from assemblage restructuring to assemblage recovery. Previous studies indicate the duration and intensity of disturbances play a role in the dynamics of assemblage recovery. In August 2011, the Pearl River, United States, was subjected to a weak black liquor spill from a paper mill which resulted in substantial loss of fish in a large stretch of the main channel. We quantified resilience and recovery of fish assemblage structure in the impacted area following the event. We compared downstream (impacted) assemblages to upstream (unimpacted) assemblages to determine initial impacts on structure. Additionally, we incorporated historic fish collections (1988–2011) to examine impacts on assemblage structure across broad temporal scales. Based on NMDS, upstream and downstream sites generally showed similar assemblage structure across sample periods with the exception of the 2 months postdischarge, where upstream and downstream sites visually differed. Multivariate analysis of variance (PERMANOVA) indicated significant seasonal variation among samples, but found no significant interaction between impacted and unimpacted assemblages following the discharge event. However, multivariate dispersion (MVDISP) showed greater variance among assemblage structure following the discharge event. These results suggest that 2 months following the disturbance represent a time period of stochasticity in regard to assemblage structure dynamics, and this was followed by rapid recovery. We term this dynamic the “hangover effect” as it represents the time frame from the cessation of the perturbation to the assemblage's return to predisturbance conditions. The availability and proximity of tributaries and upstream refugia, which were not affected by the disturbance, as well as the rapid recovery of abiotic parameters likely played a substantial role in assemblage recovery. This study not only

  5. Quantifying assemblage turnover and species contributions at ecologic boundaries.

    PubMed

    Hayek, Lee-Ann C; Wilson, Brent

    2013-01-01

    Not all boundaries, whether stratigraphical or geographical, are marked by species-level changes in community composition. For example, paleodata for some sites do not show readily discernible glacial-interglacial contrasts. Rather, the proportional abundances of species can vary subtly between glacials and interglacials. This paper presents a simple quantitative measure of assemblage turnover (assemblage turnover index, ATI) that uses changes in species' proportional abundances to identify intervals of community change. A second, functionally-related index (conditioned-on-boundary index, CoBI) identifies species contributions to the total assemblage turnover. With these measures we examine benthonic foraminiferal assemblages to assess glacial/interglacial contrasts at abyssal depths. Our results indicate that these measures, ATI and CoBI, have potential as sequence stratigraphic tools in abyssal depth deposits. Many peaks in the set of values of ATI coincide with terminations at the end of glaciations and delineate peak-bounded ATI intervals (PATIs) separated by boundaries that approximate to glacial terminations and to transgressions at neritic depths. These measures, however, can be used to evaluate the assemblage turnover and composition at any defined ecological or paleoecological boundary. The section used is from Ocean Drilling Program (OPD) Hole 994C, drilled on the Blake Ridge, offshore SE USA.

  6. Quantifying Assemblage Turnover and Species Contributions at Ecologic Boundaries

    PubMed Central

    Hayek, Lee-Ann C.; Wilson, Brent

    2013-01-01

    Not all boundaries, whether stratigraphical or geographical, are marked by species-level changes in community composition. For example, paleodata for some sites do not show readily discernible glacial-interglacial contrasts. Rather, the proportional abundances of species can vary subtly between glacials and interglacials. This paper presents a simple quantitative measure of assemblage turnover (assemblage turnover index, ATI) that uses changes in species' proportional abundances to identify intervals of community change. A second, functionally-related index (conditioned-on-boundary index, CoBI) identifies species contributions to the total assemblage turnover. With these measures we examine benthonic foraminiferal assemblages to assess glacial/interglacial contrasts at abyssal depths. Our results indicate that these measures, ATI and CoBI, have potential as sequence stratigraphic tools in abyssal depth deposits. Many peaks in the set of values of ATI coincide with terminations at the end of glaciations and delineate peak-bounded ATI intervals (PATIs) separated by boundaries that approximate to glacial terminations and to transgressions at neritic depths. These measures, however, can be used to evaluate the assemblage turnover and composition at any defined ecological or paleoecological boundary. The section used is from Ocean Drilling Program (OPD) Hole 994C, drilled on the Blake Ridge, offshore SE USA. PMID:24130679

  7. Exploring coral microbiome assemblages in the South China Sea.

    PubMed

    Cai, Lin; Tian, Ren-Mao; Zhou, Guowei; Tong, Haoya; Wong, Yue Him; Zhang, Weipeng; Chui, Apple Pui Yi; Xie, James Y; Qiu, Jian-Wen; Ang, Put O; Liu, Sheng; Huang, Hui; Qian, Pei-Yuan

    2018-02-05

    Coral reefs are significant ecosystems. The ecological success of coral reefs relies on not only coral-algal symbiosis but also coral-microbial partnership. However, microbiome assemblages in the South China Sea corals remain largely unexplored. Here, we compared the microbiome assemblages of reef-building corals Galaxea (G. fascicularis) and Montipora (M. venosa, M. peltiformis, M. monasteriata) collected from five different locations in the South China Sea using massively-parallel sequencing of 16S rRNA gene and multivariate analysis. The results indicated that microbiome assemblages for each coral species were unique regardless of location and were different from the corresponding seawater. Host type appeared to drive the coral microbiome assemblages rather than location and seawater. Network analysis was employed to explore coral microbiome co-occurrence patterns, which revealed 61 and 80 co-occurring microbial species assembling the Galaxea and Montipora microbiomes, respectively. Most of these co-occurring microbial species were commonly found in corals and were inferred to play potential roles in host nutrient metabolism; carbon, nitrogen, sulfur cycles; host detoxification; and climate change. These findings suggest that the co-occurring microbial species explored might be essential to maintain the critical coral-microbial partnership. The present study provides new insights into coral microbiome assemblages in the South China Sea.

  8. Sediment and carbon deposition vary among vegetation assemblages in a coastal salt marsh

    NASA Astrophysics Data System (ADS)

    Kelleway, Jeffrey J.; Saintilan, Neil; Macreadie, Peter I.; Baldock, Jeffrey A.; Ralph, Peter J.

    2017-08-01

    combining medium-term accretion quantification with short-term deposition measurements and chemical analyses, we have gained novel insights into above-ground biophysical processes that may explain previously observed regional differences in surface dynamics among key salt marsh vegetation assemblages. Our results suggest that Sarcocornia and Sporobolus assemblages may be particularly susceptible to changes in sea level, though quantification of below-ground processes (e.g. root production, compaction) is needed to confirm this.

  9. Historical changes in Nebraska's lotic fish assemblages: Implications of anthropogenic alterations

    USGS Publications Warehouse

    Smith, Christopher D.; Fischer, Jesse R.; Quist, Michael C.

    2014-01-01

    The plains of midwestern North America have undergone significant anthropogenic alterations following European settlement with consequent effects to lotic fish assemblage structure. We examined trends in fish assemblage structure and function in Nebraska's lotic systems using site-specific, presence-absence data from historical (1939–1940) and contemporary surveys (2003–2005; n  =  183). Shifts in fish assemblage structure were characterized by declines of specialist species (e.g., western silvery minnow Hybognathus argyritis) and increases in nonnative, sport, and generalist species (e.g., common carp Cyprinus carpio). Our research illustrates differences between historical and contemporary surveys for both taxonomic and functional metrics. Changes in fish assemblage structure were correlated with a contemporary measure of anthropogenic alteration (Human Threat Index; HTI) and were most pronounced for large-scale threats (i.e., watershed HTI, overall HTI). The HTI is a composite index of cumulative anthropogenic alterations experienced by a stream system and was used to investigate broad-scale implications of anthropogenic activity on fish assemblage structure. Fish assemblages among sites were more similar in contemporary surveys than in historical surveys, such changes might indicate a homogenization of the fish assemblages. Losses of native species and increases in introduced species have occurred in Nebraska's lotic systems across a broad temporal span and shifts are likely related to high levels of human perturbation.

  10. Host trait combinations drive abundance and canopy distribution of atmospheric bromeliad assemblages.

    PubMed

    Chaves, Cleber Juliano Neves; Dyonisio, Júlio César; Rossatto, Davi Rodrigo

    2016-01-01

    Epiphytes are strongly dependent on the conditions created by their host's traits and a certain degree of specificity is expected between them, even if these species are largely abundant in a series of tree hosts of a given environment, as in the case of atmospheric bromeliads. Despite their considerable abundance in these environments, we hypothesize that stochasticity alone cannot explain the presence and abundance of atmospheric bromeliads on host trees, since host traits could have a greater influence on the establishment of these bromeliads. We used secondary and reforested seasonal forests and three distinct silvicultures to test whether species richness, phylogenetic diversity and functional diversity of trees can predict the differential presence, abundance and distribution of atmospheric bromeliads on hosts. We compared the observed parameters of their assemblage with null models and performed successive variance hierarchic partitions of abundance and distribution of the assemblage to detect the influence of multiple traits of the tree hosts. Our results do not indicate direct relationships between the abundance of atmospheric bromeliads and phylogenetic or functional diversity of trees, but instead indicate that bromeliads occurred on fewer tree species than expected by chance. We distinguished functional tree patterns that can improve or reduce the abundance of atmospheric bromeliads, and change their distribution on branches and trunk. While individual tree traits are related to increased abundance, species traits are related to the canopy distribution of atmospheric bromeliad assemblages. A balance among these tree functional patterns drives the atmospheric bromeliad assemblage of the forest patches. Published by Oxford University Press on behalf of the Annals of Botany Company.

  11. Host trait combinations drive abundance and canopy distribution of atmospheric bromeliad assemblages

    PubMed Central

    Chaves, Cleber Juliano Neves; Dyonisio, Júlio César; Rossatto, Davi Rodrigo

    2016-01-01

    Epiphytes are strongly dependent on the conditions created by their host's traits and a certain degree of specificity is expected between them, even if these species are largely abundant in a series of tree hosts of a given environment, as in the case of atmospheric bromeliads. Despite their considerable abundance in these environments, we hypothesize that stochasticity alone cannot explain the presence and abundance of atmospheric bromeliads on host trees, since host traits could have a greater influence on the establishment of these bromeliads. We used secondary and reforested seasonal forests and three distinct silvicultures to test whether species richness, phylogenetic diversity and functional diversity of trees can predict the differential presence, abundance and distribution of atmospheric bromeliads on hosts. We compared the observed parameters of their assemblage with null models and performed successive variance hierarchic partitions of abundance and distribution of the assemblage to detect the influence of multiple traits of the tree hosts. Our results do not indicate direct relationships between the abundance of atmospheric bromeliads and phylogenetic or functional diversity of trees, but instead indicate that bromeliads occurred on fewer tree species than expected by chance. We distinguished functional tree patterns that can improve or reduce the abundance of atmospheric bromeliads, and change their distribution on branches and trunk. While individual tree traits are related to increased abundance, species traits are related to the canopy distribution of atmospheric bromeliad assemblages. A balance among these tree functional patterns drives the atmospheric bromeliad assemblage of the forest patches. PMID:26888951

  12. Metamorphism and gold mineralization in the Blue Ridge, Southernmost Appalachians

    USGS Publications Warehouse

    Stowell, H.H.; Lesher, C.M.; Green, N.L.; Sha, P.; Guthrie, G.M.; Sinha, A.K.

    1996-01-01

    Lode gold mineralization in the Blue Ridge of the southernmost Appalachians is hosted by metavolcanic rocks (e.g., Anna Howe mine, AL; Royal Vindicator mine, GA), metaplutonic rocks (e.g., Hog Mountain mine, AL), and metasedimentary rocks (e.g., Lowe, Tallapoosa, and Jones Vein mines, AL). Most gold occurs in synkinematic quartz ?? plagioclase ?? pyrite ?? pyrrhotite ?? chlorite veins localized along polydeformational faults that juxtapose rocks with significantly different peak metamorphic mineral assemblages. Mineralogy, chemistry, and O and H isotope studies suggest that the three types of host rocks have undergone differing amounts and types of alteration during mineralization. Limited wall-rock alteration in metavolcanic- and metasediment-hosted deposits, and relatively extensive wall-rock alteration in granitoid-hosted deposits, suggests that most deposits formed from fluids that were close to equilibrium with metavolcanic and metasedimentary rocks. Stable isotope compositions of the fluids calculated from vein minerals and vein selvages are consistent with a predominantly metasedimentary fluid source, but vary from deposit to deposit (-22 to -47??? ??D, 4-5??? ??18O, and 5-7??? ??34S at Anna Howe and Royal Vindicator; -48 to -50??? ??D, 9-13??? ??18O, and ca. 19??? ??34S at Lowe and Jones Vein; and -22 to -23??? ??D, 8-11??? ??18O, 9-10??? ??34S, and -6 ??13C at Hog Mountain). Silicate mineral thermobarometry of vein, vein selvage, and wall-rock mineral assemblages indicate that mineralization and regional metamorphism occured at greenschist to amphibolite facies (480?? ?? 75??C at Anna Howe, 535?? ?? 50??C at 6.4 ?? 1 kbars at Lowe, 530?? ?? 50??C at 6.9 ?? 1 kbars at Tallapoosa, and 460?? ?? 50??C at 5.5 ?? 1 kbars at Hog Mountain). Oxygen isotope fractionation between vein minerals and selvage minerals consistently records equilibration temperatures that are similar to or slightly lower than those estimated from silicate thermometry. Auriferous veins

  13. Biostratigraphy and foraminiferal Assemblages of the West Siberian Albian

    NASA Astrophysics Data System (ADS)

    Podobina, V. M.

    2017-12-01

    New data of the Biostratigraphy and Albian foraminiferal assemblages from the sections of newly drilled wells in the Yamal peninsula have been obtained. This territory is assigned by the author to the Northern palaeobiogeographical district, the southern border of which goes along the latitudinal flow of the Ob River. The most diverse Albian foraminiferal assemblages have been discovered in the section of borehole 50 of the Malyginskaya area as well as in the sections of borehole 124 of the West-Tambeiskaya, boreholes, 201, 205 of the North-Tambeiskaya areas. Somewhat similar Albian foraminiferal assemblages were earlier studied by the author in 10 sections of the boreholes of the Samatlor area in the latitudinal Ob River Region. The Middle Albian assemblage is the most stable and diverse in its specific respect. It was discovered not only in the identified sections in the Yamal wells but also southwards in the earlier explored areas. The Albian foraminiferal species of the Yamal peninsula are illustrated in 5 photos and 1 drawing.

  14. Radioactive mineral springs in Delta County, Colorado

    USGS Publications Warehouse

    Cadigan, Robert A.; Rosholt, John N.; Felmlee, J. Karen

    1976-01-01

    The system of springs in Delta County, Colo., contains geochemical clues to the nature and location of buried uranium-mineralized rock. The springs, which occur along the Gunnison River and a principal tributary between Delta and Paonia, are regarded as evidence of a still-functioning hydrothermal system. Associated with the springs are hydrogen sulfide and sulfur dioxide gas seeps, carbon dioxide gas-powered geysers, thick travertine deposits including radioactive travertine, and a flowing warm-water (41?C) radioactive well. Geochemical study of the springs is based on surface observations, on-site water-property measurements, and sampling of water, travertine, soft precipitates, and mud. The spring deposits are mostly carbonates, sulfates, sulfides, and chlorides that locally contain notable amounts of some elements, such as arsenic, barium, lithium, and radium. Samples from five localities have somewhat different trace element assemblages even though they are related to the same hydrothermal system. All the spring waters but one are dominated by sodium chloride or sodium bicarbonate. The exception is an acid sulfate water with a pH of 2.9, which contains high concentrations of aluminum and iron. Most of the detectable radioactivity is due to the presence of radium-226, a uranium daughter product, but at least one spring precipitate contains abundant radium-228, a thorium daughter product. The 5:1 ratio of radium-228 to radium-226 suggests the proximity of a vein-type deposit as a source for the radium. The proposed locus of a thorium-uranium mineral deposit is believed to lie in the vicinity of Paonia, Colo. Exact direction and depth are not determinable from data now available.

  15. Fish assemblages and habitat relationships in a small northern Great Plains stream

    USGS Publications Warehouse

    Barfoot, C.A.; White, R.G.

    1999-01-01

    We examined fish populations and environmental characteristics of pool and riffle habitats of Little Beaver Creek, Montana, a small northern Great Plains stream. We collected 4,980 fishes representing 20 species in eight families. The most abundant and species-rich family was Cyprinidae. Nearly 88% (4,369) of all fishes were collected in pools. Pools also supported greater numbers ofspecies (x = 6.3, SO = 2.6, n = 58) than did riffles ( x = 2.2, SO = 1.9, n = 47). Most species showed distinct patterns of relative abundance along the stream gradient. Community changes were primarily reflected by the downstream addition of species; species replacement was of less importance. A multivariate analysis of fish relative abundance identified two relatively well-defined pool fish assemblages: a downstream assemblage comprised largely of native fluvial cyprinids, and a more diverse midstream-upstream assemblage comprised of fishes from several families. No well-defined assemblages were identified in riffle habitats. Environmental measures of stream size, substrate characteristics, water clarity, and banks ide conditions appeared to be associated with differences in fish assemblage structure. However, correlations between habitat conditions and fish assemblages were weak, possibly because a complex of factors act conculTently to shape assemblages.

  16. ARSENIC MINERALS AS INDICATORS OF CONDITIONS OF GOLD DEPOSITION IN CARLIN-TYPE GOLD DEPOSITS.

    USGS Publications Warehouse

    Rytuba, James J.

    1984-01-01

    Arsenic minerals commonly occurring in Carlin-type gold deposits include orpiment and realgar and, more rarely, native arsenic and arsenopyrite. Other arsenic-bearing phases present include arsenian pyrite and stibnite and a number of thallium and mercury sulfides. Under conditions of constant temperature and pressure, the relative stability of arsenic minerals is a function of sulfur activity. At high sulfur activity, orpiment is the stable phase. As sulfur activity is decreased, more sulfur-deficient arsenic phases become stable with the progressive formation of realgar, native arsenic, arsenopyrite, and finally, loellingite at very low sulfur activity. Three univariant equilibrium assemblages: orpiment plus realgar, realgar plus native arsenic and native arsenic plus arsenopyrite are useful indicators of sulfur activity and commonly occur in the epithermal environment.

  17. Aquatic assemblages of the highly urbanized Santa Ana River Basin, California

    USGS Publications Warehouse

    Brown, Larry R.; Burton, Carmen; Belitz, Kenneth

    2005-01-01

    We assessed the structure of periphyton, benthic macroinvertebrate, and fish assemblages and their associations with environmental variables at 17 sites on streams of the highly urbanized Santa Ana River basin in Southern California. All assemblages exhibited strong differences between highly urbanized sites in the valley and the least-impacted sites at the transition between the valley and undeveloped mountains. Results within the urbanized area differed among taxa. Periphyton assemblages were dominated by diatoms (>75% of total taxa). Periphyton assemblages within the urbanized area were not associated with any of the measured environmental variables, suggesting that structure of urban periphyton assemblages might be highly dependent on colonization dynamics. The number of Ephemeroptera, Trichoptera, and Plecoptera (EPT) taxa included in macroinvertebrate assemblages ranged from 0 to 6 at urbanized sites. Benthic macroinvertebrate assemblages had significant correlations with several environmental variables within the urban area, suggesting that stream size and permanence were important determinants of distribution among the species able to survive conditions in urban streams. Only 4 of 16 fish species collected were native to the drainage. Fish assemblages of urbanized sites included two native species, arroyo chub Gila orcuttii and Santa Ana sucker Catostomus santaanae, at sites that were intermediate in coefficient of variation of bank-full width, depth, bed substrate, and water temperature. Alien species dominated urbanized sites with lesser or greater values for these variables. These results suggest that urban streams can be structured to enhance populations of native fishes. Continued study of urban streams in the Santa Ana River basin and elsewhere will contribute to the basic understanding of ecological principles and help preserve the maximum ecological value of streams in highly urbanized areas.

  18. Structure of Mesophotic Reef Fish Assemblages in the Northwestern Hawaiian Islands

    PubMed Central

    Kosaki, Randall K.; Wagner, Daniel; Kane, Corinne

    2016-01-01

    Mesophotic coral ecosystems (MCEs) support diverse communities of marine organisms with changes in community structure occurring along a depth gradient. In recent years, MCEs have gained attention due to their depths that provide protection from natural and anthropogenic stressors and their relative stability over evolutionary time periods, yet ecological structures of fish assemblages in MCEs remain largely un-documented. Here, we investigated composition and trophic structure of reef fish assemblages in the Northwestern Hawaiian Islands (NWHI) along a depth gradient from 1 to 67 m. The structure of reef fish assemblages as a whole showed a clear gradient from shallow to mesophotic depths. Fish assemblages at mesophotic depths had higher total densities than those in shallower waters, and were characterized by relatively high densities of planktivores and invertivores and relatively low densities of herbivores. Fishes that typified assemblages at mesophotic depths included six species that are endemic to the Hawaiian Islands. The present study showed that mesophotic reefs in the NWHI support unique assemblages of fish that are characterized by high endemism and relatively high densities of planktivores. Our findings underscore the ecological importance of these undersurveyed ecosystems and warrant further studies of MCEs. PMID:27383614

  19. Reptile assemblage response to restoration of fire-suppressed longleaf pine sandhills.

    PubMed

    Steen, David A; Smith, Lora L; Conner, L M; Litt, Andrea R; Provencher, Louis; Hiers, J Kevin; Pokswinski, Scott; Guyer, Craig

    2013-01-01

    Measuring the effects of ecological restoration on wildlife assemblages requires study on broad temporal and spatial scales. Longleaf pine (Pinus palustris) forests are imperiled due to fire suppression and subsequent invasion by hardwood trees. We employed a landscape-scale, randomized-block design to identify how reptile assemblages initially responded to restoration treatments including removal of hardwood trees via mechanical methods (felling and girdling), application of herbicides, or prescribed burning alone. Then, we examined reptile assemblages after all sites experienced more than a decade of prescribed burning at two- to thee-year return intervals. Data were collected concurrently at reference sites chosen to represent target conditions for restoration. Reptile assemblages changed most rapidly in response to prescribed burning, but reptile assemblages at all sites, including reference sites, were generally indistinguishable by the end of the study. Thus, we suggest that prescribed burning in longleaf pine forests over long time periods is an effective strategy for restoring reptile assemblages to the reference condition. Application of herbicides or mechanical removal of hardwood trees provided no apparent benefit to reptiles beyond what was achieved by prescribed fire alone.

  20. Clay Mineral Structure Similar to Clays Observed in Mudstone on Mars

    NASA Image and Video Library

    2013-12-09

    This schematic shows the atomic structure of the smallest units that make up the layers and interlayer region of clay minerals. This structure is similar to the clay mineral in drilled rock powder collected by NASA Curiosity Mars rover.

  1. Environmental characteristics drive variation in Amazonian understorey bird assemblages

    PubMed Central

    Magnusson, William E.; Anderson, Marti J.; Schlegel, Martin; Pe’er, Guy; Henle, Klaus

    2017-01-01

    Tropical bird assemblages display patterns of high alpha and beta diversity and, as tropical birds exhibit strong habitat specificity, their spatial distributions are generally assumed to be driven primarily by environmental heterogeneity and interspecific interactions. However, spatial distributions of some Amazonian forest birds are also often restricted by large rivers and other large-scale topographic features, suggesting that dispersal limitation may also play a role in driving species’ turnover. In this study, we evaluated the effects of environmental characteristics, topographic and spatial variables on variation in local assemblage structure and diversity of birds in an old-growth forest in central Amazonia. Birds were mist-netted in 72 plots distributed systematically across a 10,000 ha reserve in each of three years. Alpha diversity remained stable through time, but species composition changed. Spatial variation in bird-assemblage structure was significantly related to environmental and topographic variables but not strongly related to spatial variables. At a broad scale, we found bird assemblages to be significantly distinct between two watersheds that are divided by a central ridgeline. We did not detect an effect of the ridgeline per se in driving these patterns, indicating that most birds are able to fly across it, and that differences in assemblage structure between watersheds may be due to unmeasured environmental variables or unique combinations of measured variables. Our study indicates that complex geography and landscape features can act together with environmental variables to drive changes in the diversity and composition of tropical bird assemblages at local scales, but highlights that we still know very little about what makes different parts of tropical forest suitable for different species. PMID:28225774

  2. Geochemical constraints on the Hadean environment from mineral fingerprints of prokaryotes.

    PubMed

    Novoselov, Alexey A; Silva, Dailto; Schneider, Jerusa; Abrevaya, Ximena Celeste; Chaffin, Michael S; Serrano, Paloma; Navarro, Margareth Sugano; Conti, Maria Josiane; Souza Filho, Carlos Roberto de

    2017-06-21

    The environmental conditions on the Earth before 4 billion years ago are highly uncertain, largely because of the lack of a substantial rock record from this period. During this time interval, known as the Hadean, the young planet transformed from an uninhabited world to the one capable of supporting, and inhabited by the first living cells. These cells formed in a fluid environment they could not at first control, with homeostatic mechanisms developing only later. It is therefore possible that present-day organisms retain some record of the primordial fluid in which the first cells formed. Here we present new data on the elemental compositions and mineral fingerprints of both Bacteria and Archaea, using these data to constrain the environment in which life formed. The cradle solution that produced this elemental signature was saturated in barite, sphene, chalcedony, apatite, and clay minerals. The presence of these minerals, as well as other chemical features, suggests that the cradle environment of life may have been a weathering fluid interacting with dry-land silicate rocks. The specific mineral assemblage provides evidence for a moderate Hadean climate with dry and wet seasons and a lower atmospheric abundance of CO 2 than is present today.

  3. Composition and daytime vertical distribution of the ichthyoplankton assemblage in the Central Cantabrian Sea shelf, during summer: An Eulerian study

    NASA Astrophysics Data System (ADS)

    Rodriguez, J. M.; Gonzalez-Pola, C.; Lopez-Urrutia, A.; Nogueira, E.

    2011-09-01

    During summer, wind driven coastal upwelling dominates in the Central Cantabrian Sea (southern Bay of Biscay). Nevertheless, atmospheric forcing is highly variable and wind pulses may cause noticeable and fast hydrographic responses in the shelf region. In this paper, the composition and vertical distribution of the summer ichthyoplankton assemblage during the daytime at a fixed station, located on the Central Cantabrian Sea shelf, are documented. Also, the impact of a short-time scale hydrographic event on the abundance and structure of the larval fish assemblage is examined. Significant small-scale temporal hydrographic variability was observed. Currents showed changes in speed and direction and significant changes in thermocline depth were also observed. A total of 34 taxa of fish larvae were identified. Engraulis encrasicolus eggs and larvae of the shelf-dwelling species Trachurus trachurus, Capros aper and E. encrasicolus dominated the ichthyoplankton assemblage. The distribution of E. encrasicolus eggs and fish larvae was vertically structured. E. encrasicolus egg concentration increased exponentially towards the surface. Fish larvae showed a subsurface peak of concentration and their vertical distribution was not conditioned by thermocline depths. The short term hydrographic event did not affect the vertical distribution of fish larvae but it accounted for significant temporal changes in larval fish assemblage structure and abundance. Results suggest that temperature and light intensity are important factors in the vertical distribution of fish larvae. They also indicate that the temporal monitoring of the larval fish assemblage in this region requires multiple sampling sites.

  4. Principal determinants of species and functional diversity of carabid beetle assemblages during succession at post-industrial sites.

    PubMed

    Sipos, J; Hodecek, J; Kuras, T; Dolny, A

    2017-08-01

    Although ecological succession is one of the principal focuses of recent restoration ecology research, it is still unclear which factors drive this process and positively influence species richness and functional diversity. In this study we sought to elucidate how species traits and functional diversity change during forest succession, and to identify important factors that determine the species in the observed assemblages. We analyzed species richness and functional diversity of ground beetle assemblages in relation to succession on post-industrial localities after habitat deterioration caused by spoil deposition. We selected ground beetles as they are known to be sensitive to landscape changes (with a large range of responses), and their taxonomy and ecology are generally well-known. Ground beetles were sampled on the spoil heaps during the last 30 years when spontaneous succession occurred. To calculate functional diversity, we used traits related to habitat and trophic niche, i.e. food specialization, wing morphology, trophic level, and bio-indication value. Ground beetle species were found to be distributed non-randomly in the assemblages in the late phase of succession. Ordination analyses revealed that the ground beetle assemblage was significantly associated with the proportion of forested area. Environmental heterogeneity generated assemblages that contained over-dispersed species traits. Our findings indicated that environmental conditions at late successional stages supported less mobile carnivorous species. Overall, we conclude that the decline in species richness and functional diversity in the middle of the studied succession gradient indicated that the assemblages of open habitats had been replaced by species typical of forest ecosystems.

  5. Bait Effects in Sampling Coral Reef Fish Assemblages with Stereo-BRUVs

    PubMed Central

    Dorman, Stacey R.; Harvey, Euan S.; Newman, Stephen J.

    2012-01-01

    Baited underwater video techniques are increasingly being utilised for assessing and monitoring demersal fishes because they are: 1) non extractive, 2) can be used to sample across multiple habitats and depths, 3) are cost effective, 4) sample a broader range of species than many other techniques, 5) and with greater statistical power. However, an examination of the literature demonstrates that a range of different bait types are being used. The use of different types of bait can create an additional source of variability in sampling programs. Coral reef fish assemblages at the Houtman Abrolhos Islands, Western Australia, were sampled using baited remote underwater stereo-video systems. One-hour stereo-video recordings were collected for four different bait treatments (pilchards, cat food, falafel mix and no bait (control)) from sites inside and outside a targeted fishery closure (TFC). In total, 5209 individuals from 132 fish species belonging to 41 families were recorded. There were significant differences in the fish assemblage structure and composition between baited and non-baited treatments (P<0.001), while no difference was observed with species richness. Samples baited with cat food and pilchards contained similar ingredients and were found to record similar components of the fish assemblage. There were no significant differences in the fish assemblages in areas open or closed to fishing, regardless of the bait used. Investigation of five targeted species indicated that the response to different types of bait was species-specific. For example, the relative abundance of Pagrus auratus was found to increase in areas protected from fishing, but only in samples baited with pilchards and cat food. The results indicate that the use of bait in conjunction with stereo-BRUVs is advantageous. On balance, the use of pilchards as a standardised bait for stereo-BRUVs deployments is justified for use along the mid-west coast of Western Australia. PMID:22848522

  6. Bait effects in sampling coral reef fish assemblages with stereo-BRUVs.

    PubMed

    Dorman, Stacey R; Harvey, Euan S; Newman, Stephen J

    2012-01-01

    Baited underwater video techniques are increasingly being utilised for assessing and monitoring demersal fishes because they are: 1) non extractive, 2) can be used to sample across multiple habitats and depths, 3) are cost effective, 4) sample a broader range of species than many other techniques, 5) and with greater statistical power. However, an examination of the literature demonstrates that a range of different bait types are being used. The use of different types of bait can create an additional source of variability in sampling programs. Coral reef fish assemblages at the Houtman Abrolhos Islands, Western Australia, were sampled using baited remote underwater stereo-video systems. One-hour stereo-video recordings were collected for four different bait treatments (pilchards, cat food, falafel mix and no bait (control)) from sites inside and outside a targeted fishery closure (TFC). In total, 5209 individuals from 132 fish species belonging to 41 families were recorded. There were significant differences in the fish assemblage structure and composition between baited and non-baited treatments (P<0.001), while no difference was observed with species richness. Samples baited with cat food and pilchards contained similar ingredients and were found to record similar components of the fish assemblage. There were no significant differences in the fish assemblages in areas open or closed to fishing, regardless of the bait used. Investigation of five targeted species indicated that the response to different types of bait was species-specific. For example, the relative abundance of Pagrus auratus was found to increase in areas protected from fishing, but only in samples baited with pilchards and cat food. The results indicate that the use of bait in conjunction with stereo-BRUVs is advantageous. On balance, the use of pilchards as a standardised bait for stereo-BRUVs deployments is justified for use along the mid-west coast of Western Australia.

  7. Temporal changes in taxonomic and functional diversity of fish assemblages downstream from mountaintop mining

    USGS Publications Warehouse

    Hitt, Nathaniel P.; Chambers, Douglas B.

    2014-01-01

    Mountaintop mining (MTM) affects chemical, physical, and hydrological properties of receiving streams, but the long-term consequences for fish-assemblage structure and function are poorly understood. We sampled stream fish assemblages using electrofishing techniques in MTM exposure sites and reference sites within the Guyandotte River basin, USA, during 2010–2011. We calculated indices of taxonomic diversity (species richness, abundance, Shannon diversity) and functional diversity (functional richness, functional evenness, functional divergence) to compare exposure and reference assemblages between seasons (spring and autumn) and across years (1999–2011). We based temporal comparisons on 2 sites that were sampled during 1999–2001 by Stauffer and Ferreri (2002). Exposure assemblages had lower taxonomic and functional diversity than reference assemblages or simulated assemblages that accounted for random variation. Differences in taxonomic composition between reference and exposure assemblages were associated with conductivity and aqueous Se concentrations. Exposure assemblages had fewer species, lower abundances, and less biomass than reference assemblages across years and seasons. Green Sunfish (Lepomis cyanellus) and Creek Chub (Semotilus atromaculatus) became numerically dominant in exposure assemblages over time because of their persistence and losses of other taxa. In contrast, species richness increased over time in reference assemblages, a result that may indicate recovery from drought. Mean individual biomass increased as fish density decreased and most obligate invertivores were apparently extirpated at MTM exposure sites. Effects of MTM were not related to physical-habitat conditions but were associated with water-quality variables, which may limit quality and availability of benthic macroinvertebrate prey. Simulations revealed effects of MTM that could not be attributed to random variation in fish assemblage structure.

  8. Seasonal changes in fish assemblage structure at a shallow seamount in the Gulf of California.

    PubMed

    Jorgensen, Salvador J; Klimley, A Peter; Muhlia-Melo, Arturo; Morgan, Steven G

    2016-01-01

    Seamounts have generally been identified as locations that can promote elevated productivity, biomass and predator biodiversity. These properties attract seamount-associated fisheries where elevated harvests can be obtained relative to surrounding areas. There exists large variation in the geological and oceanographic environment among the thousands of locations that fall within the broad definition of seamount. Global seamount surveys have revealed that not all seamounts are hotspots of biodiversity, and there remains a strong need to understand the mechanisms that underlie variation in species richness observed. We examined the process of fish species assembly at El Bajo Espiritu Santo (EBES) seamount in the Gulf of California over a five-year study period. To effectively quantify the relative abundance of fast-moving and schooling fishes in a 'blue water' habitat, we developed a simplified underwater visual census (UVC) methodology and analysis framework suitable for this setting and applicable to future studies in similar environments. We found correlations between seasonally changing community structure and variability in oceanographic conditions. Individual species responses to thermal habitat at EBES revealed three distinct assemblages, a 'fall assemblage' tracking warmer overall temperature, a 'spring assemblage' correlated with cooler temperature, and a 'year-round assemblage' with no significant response to temperature. Species richness was greatest in spring, when cool and warm water masses stratified the water column and a greater number of species from all three assemblages co-occurred. We discuss our findings in the context of potential mechanisms that could account for predator biodiversity at shallow seamounts.

  9. Shelf gradients of echinoid assemblages from the Miocene of Sardinia

    NASA Astrophysics Data System (ADS)

    Nebelsick, James; Andrea, Mancosu

    2017-04-01

    Well exposed Miocene echinoid assemblages from Sardinia representing various environmental settings including both siliciclastics and carbonates have been studied with respect to reconstructing palaeoenvironmental conditions along a shelf gradient. The basis of this study includes 1) detailed logging of sedimentary facies in the field, 2) interpreting their behavior and life habits of the preserved echinoids by applying functional morphological reconstructions of the echinoid skeletons and comparing them to related Recent echinoid taxa, 3) quantifying taphonomic features of test preservation including predation, abrasion, fragmentation, encrustation and bioerosion, and finally 4) analyzing accompanying fauna and flora as well as trace fossils. The assemblages included clypeasteroid dominated assemblages in shallow water settings where often mass accumulations of sand dollars are present. Spatangoid dominated assemblages are found in more offshore settings where diversity is determined by varying burrowing depths, feeding strategies and resource partitioning accompanied by varying rates of bioturbation and episodes of sediment deposition by storms. Mixed assemblages also occur ranging from shallow to deeper water with varying substrates including sea grass, as well as coarser and finer sediments. Finally, deeper water monotypic assemblages are present in storm-dominated siliciclastic shelf environments including both regular and irregular echinoids. In general, echinoid presence is determined by the ecological preferences of the taxa involved, their propensities for gregarious behavior, the differential preservation potentials of the varied skeletal architectures present as well as sedimentary environment in which they occur.

  10. The Measurement of Motor Skill Assemblages and Successful Selection

    ERIC Educational Resources Information Center

    Worrall, N. R.

    1974-01-01

    This paper defines the required abilities for a given job as a Task Skill Assemblage (TSA), and the stored skill and knowledge is possessed by a candidate for that job as the Personal Skill Assemblage (PSA). A method is suggested for measuring the degree of match between the TSA and PSA. (Author)

  11. Diagenetic effects on magnetic minerals in a Holocene lacustrine sediment core from Huguangyan maar lake, southeast China

    NASA Astrophysics Data System (ADS)

    Wu, Xudong; Wang, Yong; Bian, Liu; Shen, Ji

    2016-09-01

    Post-depositional reductive diagenesis usually results in partial or entire cleansing of the pristine palaeomagnetic signal, therefore, its intensity is important to be assessed for sediments that are in the purpose of retrieving palaeomagnetic information. Grain size, rock magnetic and geochemical studies on the entire core, along with scanning electron microscope observations and X-ray diffraction analyses for representative samples were carried out on a Holocene sediment core retrieved from the deep water part of Huguangyan maar lake (HGY), southeast China. The pristine magnetic mineral assemblage of the studied core is domianted by superparamagnetic (SP) and stable single domain titanomagnetite, and high coercivity minerals are not detectable. Based on down-core variations of the average grain size (MZ), total organic carbon (TOC), detrital elements (Al, Ti, Fe and Mn) and the concentration and mineralogy of magnetic minerals, the studied core could be divided into three subsections. The uppermost subsection is the least affected by diagenesis, with detrital titanomagnetite as the dominant magnetic mineral. This is owing to low TOC contents, but high detrital input generated by weak Asian summer monsoon intensity during the late Holocene. The intermediate subsection shows down-core progressively enhanced dissolution of detrital titanomagnetite, and concomitant formation of authigenic pyrite and siderite, which indicates down-core progressively enhanced diagenesis generated by down-core progressive increasing TOC content, but decreasing detrital input as the result of down-core progressively strengthened Asian summer monsoon intensity. The pristine magnetic mineral assemblage has been profoundly modified in the lowermost subsection. At certain positions of the lowermost subsection, detrital titanomagnetite has been even completely dissolved via diagenesis, giving place to authigenic pyrite and siderite. High TOC content, but low detrital input generated from

  12. Formation of ore minerals in metamorphic rocks of the German continental deep drilling site (KTB)

    NASA Astrophysics Data System (ADS)

    Kontny, A.; Friedrich, G.; Behr, H. J.; de Wall, H.; Horn, E. E.; Möller, P.; Zulauf, G.

    1997-08-01

    The German Continental Deep Drilling Program (KTB) drilled a 9.1 km deep profile through amphibolite facies metamorphic rocks and reached in situ temperatures of 265°C. Each lithologic unit is characterized by typical ore mineral assemblages related to the regional metamorphic conditions. Paragneisses contain pyrrhotite + rutile + ilmenite ± graphite, metabasic units bear ilmenite + rutile + pyrrhotite ± pyrite, and additionally, the so-called variegated units yield pyrrhotite + titanite assemblages. In the latter unit, magnetite + ilmenite + rutile + titanite assemblages related to the lower amphibolite facies breakdown of ilmenite-hematite solid solution also occur locally. Retrograde hydrothermal mineralization which commenced during Upper Carboniferous times is characterized by the following geochemical conditions: (1) low saline Na-K-Mg-Cl fluids with sulfur and oxygen fugacities at the pyrite-pyrrhotite buffer and temperatures of 400-500°C, (2) fluids with CO2, CH4±N2, andpH, Eh, sulfur, and oxygen fugacity in the stability field of graphite + pyrite at temperatures of 280-350° and (3) moderate to high saline Ca-Na-Cl fluids with CH4+ N2; sulfur and oxygen fugacity are in the stability field of pyrrhotite at temperatures <300°C. The latter environment is confirmed by in situ conditions found at the bottom of the deep drilling. Monoclinic, ferrimagnetic pyrrhotite is the main carrier of magnetization which disappears below about 8.6 km, corresponding to in situ temperatures of about 250°C. Below this depth, hexagonal antiferromagnetic pyrrhotite with a Curie temperature of 260°C is the stable phase. Temperature-dependent transformation of pyrrhotite and the reaching of its Curie isotherm within the Earth crust are one of the striking results of the KTB deep drilling project.

  13. The importance of grain size to mantle dynamics and seismological observations

    NASA Astrophysics Data System (ADS)

    Gassmoeller, R.; Dannberg, J.; Eilon, Z.; Faul, U.; Moulik, P.; Myhill, R.

    2017-12-01

    Grain size plays a key role in controlling the mechanical properties of the Earth's mantle, affecting both long-timescale flow patterns and anelasticity on the timescales of seismic wave propagation. However, dynamic models of Earth's convecting mantle usually implement flow laws with constant grain size, stress-independent viscosity, and a limited treatment of changes in mineral assemblage. We study grain size evolution, its interplay with stress and strain rate in the convecting mantle, and its influence on seismic velocities and attenuation. Our geodynamic models include the simultaneous and competing effects of dynamic recrystallization resulting from dislocation creep, grain growth in multiphase assemblages, and recrystallization at phase transitions. They show that grain size evolution drastically affects the dynamics of mantle convection and the rheology of the mantle, leading to lateral viscosity variations of six orders of magnitude due to grain size alone, and controlling the shape of upwellings and downwellings. Using laboratory-derived scaling relationships, we convert model output to seismologically-observable parameters (velocity, attenuation) facilitating comparison to Earth structure. Reproducing the fundamental features of the Earth's attenuation profile requires reduced activation volume and relaxed shear moduli in the lower mantle compared to the upper mantle, in agreement with geodynamic constraints. Faster lower mantle grain growth yields best fit to seismic observations, consistent with our re-examination of high pressure grain growth parameters. We also show that ignoring grain size in interpretations of seismic anomalies may underestimate the Earth's true temperature variations.

  14. U-Pb zircon and 40Ar/39Ar geochronology of sericite from hydrothermal alteration zones: new constraints for the timing of Ediacaran gold mineralization in the Sukhaybarat area, western Afif terrane, Saudi Arabia

    NASA Astrophysics Data System (ADS)

    Harbi, Hesham M.; Ali, Kamal A.; McNaughton, Neal J.; Andresen, Arild

    2018-04-01

    The Sukhaybarat East and Red Hill deposits, in the northeastern part of the Arabian Shield, are mesothermal vein-type gold deposits hosted by late Cryogenian-Ediacaran intrusive rocks of the Idah suites (diorite, tonalite, granodiorite) and, at Sukhaybarat East, also by Ediacaran metasedimentary rocks. Gold mineralization comprises quartz-arsenopyrite veins (Sukhaybarat East), quartz-carbonate-pyrite veins (Red Hill), and subordinate gold-base metal sulfide veins. In the Red Hill deposit, alteration is complicated due to multiple overprinting hydrothermal events and is characteristically affected by pervasive, pink quartz-K-feldspar-hematite alteration which is overprinted by potassic alteration characterized by a quartz-biotite-carbonate-muscovite/sericite-rutile-apatite assemblage. This assemblage is associated with molybdenite veins which appear to form late in the paragenetic sequence and may represent either evolution of the ore fluid composition, or a later, unrelated mineralized fluids. Hydrothermal alteration at the Sukhaybarat East deposit is dominated by quartz-carbonate-sericite-arsenopyrite assemblages. Zircon from ore-hosting tonalite at Sukhaybarat East yields a U-Pb age of 629 ± 6 Ma, and biotite from the same rock gives an 40Ar/39Ar age of 622 ± 23 Ma. The 40Ar/39Ar age is within the uncertainty range for the U-Pb age of the host intrusion and is interpreted as a minimally disturbed cooling age for the tonalite. In the Red Hill area, granodiorite was emplaced at 615 ± 5 Ma, whereas muscovite/sericite separated from a mineralized sample of a quartz-carbonate-pyrite vein, that was overprinted by molybdenite-bearing veinlets, yields an 40Ar/39Ar age of 597 ± 8 Ma. We interpreted this age to represent the maximum age of the molybdenite mineralization and the probable minimum age of gold mineralization in the Red Hill deposit.

  15. Oxygen-isotope exchange and mineral alteration in gabbros of the Lower Layered Series, Kap Edvard Holm Complex, East Greenland

    USGS Publications Warehouse

    Fehlhaber, Kristen L.; Bird, Dennis K.

    1991-01-01

    Multiple intrusions of gabbros, mafic dikes, and syenites in the Kap Edvard Holm Complex gave rise to prolonged circulation of meteoric hydrothermal solutions and extreme isotope exchange and mineral alteration in the 3600-m-thick Lower Layered Series gabbros. In the Lower Layered Series, δ18O of plagioclase varies from +0.3‰ to -5.8‰, and it decreases with an increase in the volume of secondary talc, chlorite, and actinolite. In the same gabbros, pyroxenes have a more restricted range in δ18O, from 5.0‰ to 3.8‰ and values of δ18Opyroxene are independent of the abundance of secondary minerals, which ranges from 14% to 30%. These relations indicate that large amounts of water continued to flow through the rocks at temperatures of <500-600°C, altering the gabbros to assemblages of talc + chlorite + actinolite ± epidote ±albite and causing significant oxygen-isotope exchange in plagioclase, but not in pyroxene. The extensive low-temperature secondary mineralization and 18O depletion of plagioclase in the Lower Layered Series are associated with the later emplacement of dikes and gabbros and syenites, which created new fracture systems and provided heat sources for hydrothermal fluid circulation. This produced subsolidus mineral alteration and isotope exchange in the Lower Layered Series that are distinct from those in the Skaergaard and Cuillin gabbros of the North Atlantic Tertiary province, but are similar to those observed in some oceanic gabbros.

  16. Mineral Composition of Organically Grown Wheat Genotypes: Contribution to Daily Minerals Intake

    PubMed Central

    Hussain, Abrar; Larsson, Hans; Kuktaite, Ramune; Johansson, Eva

    2010-01-01

    In this study, 321 winter and spring wheat genotypes were analysed for twelve nutritionally important minerals (B, Cu, Fe, Se, Mg, Zn, Ca, Mn, Mo, P, S and K). Some of the genotypes used were from multiple locations and years, resulting in a total number of 493 samples. Investigated genotypes were divided into six genotype groups i.e., selections, old landraces, primitive wheat, spelt, old cultivars and cultivars. For some of the investigated minerals higher concentrations were observed in selections, primitive wheat, and old cultivars as compared to more modern wheat material, e.g., cultivars and spelt wheat. Location was found to have a significant effect on mineral concentration for all genotype groups, although for primitive wheat, genotype had a higher impact than location. Spring wheat was observed to have significantly higher values for B, Cu, Fe, Zn, Ca, S and K as compared to winter wheat. Higher levels of several minerals were observed in the present study, as compared to previous studies carried out in inorganic systems, indicating that organic conditions with suitable genotypes may enhance mineral concentration in wheat grain. This study also showed that a very high mineral concentration, close to daily requirements, can be produced by growing specific primitive wheat genotypes in an organic farming system. Thus, by selecting genotypes for further breeding, nutritional value of the wheat flour for human consumption can be improved. PMID:20948934

  17. Habitat Specialization in Tropical Continental Shelf Demersal Fish Assemblages

    PubMed Central

    Fitzpatrick, Ben M.; Harvey, Euan S.; Heyward, Andrew J.; Twiggs, Emily J.; Colquhoun, Jamie

    2012-01-01

    The implications of shallow water impacts such as fishing and climate change on fish assemblages are generally considered in isolation from the distribution and abundance of these fish assemblages in adjacent deeper waters. We investigate the abundance and length of demersal fish assemblages across a section of tropical continental shelf at Ningaloo Reef, Western Australia, to identify fish and fish habitat relationships across steep gradients in depth and in different benthic habitat types. The assemblage composition of demersal fish were assessed from baited remote underwater stereo-video samples (n = 304) collected from 16 depth and habitat combinations. Samples were collected across a depth range poorly represented in the literature from the fringing reef lagoon (1–10 m depth), down the fore reef slope to the reef base (10–30 m depth) then across the adjacent continental shelf (30–110 m depth). Multivariate analyses showed that there were distinctive fish assemblages and different sized fish were associated with each habitat/depth category. Species richness, MaxN and diversity declined with depth, while average length and trophic level increased. The assemblage structure, diversity, size and trophic structure of demersal fishes changes from shallow inshore habitats to deeper water habitats. More habitat specialists (unique species per habitat/depth category) were associated with the reef slope and reef base than other habitats, but offshore sponge-dominated habitats and inshore coral-dominated reef also supported unique species. This suggests that marine protected areas in shallow coral-dominated reef habitats may not adequately protect those species whose depth distribution extends beyond shallow habitats, or other significant elements of demersal fish biodiversity. The ontogenetic habitat partitioning which is characteristic of many species, suggests that to maintain entire species life histories it is necessary to protect corridors of connected

  18. Mass transfer and fluid evolution in late-metamorphic veins, Rhenish Massif (Germany): insight from alteration geochemistry and fluid-mineral equilibria modeling

    NASA Astrophysics Data System (ADS)

    Marsala, Achille; Wagner, Thomas

    2016-08-01

    Element mobility and fluid-rock interaction related to the formation of late-metamorphic quartz veins have been studied by combination of mineral chemistry, whole-rock geochemistry, mass balance analysis and fluid-mineral equilibria modeling. The quartz veins are hosted by very low-grade metasedimentary rocks of the fold-and-thrust belt of the Rhenish Massif (Germany). The veins record two stages of evolution, a massive vein filling assemblage with elongate-blocky quartz, chlorite, apatite and albite, and a later open space filling assemblage with euhedral crystals of quartz, ankerite-dolomite and minor calcite and sulfides. Detailed mass balance analysis of an alteration profile adjacent to a representative quartz vein demonstrates that element mobility is restricted to the proximal zone. The most important element changes are gain of Ca, Fe, Mg, Mn, P and CO2, and loss of Si, K and Na. The data demonstrate that wall-rock carbonation is one of the main alteration features, whereas mobility of Si, K and Na are related to dissolution of quartz and destruction of detrital feldspar and muscovite. The whole-rock geochemical data, in conjunction with fluid composition data and pressure-temperature estimates, were used as input for fluid-mineral equilibria modeling in the system Si-Al-Fe-Mg-Ca-Na-K-C-S-O-H-B-F-Cl. Modeling involved calculation of rock-buffered fluid compositions over the temperature interval 100-500 °C, and reaction-path simulations where a rock-buffered high-temperature fluid reacts with fresh host-rocks at temperatures of 400, 300 and 200 °C. Calculated rock-buffered fluid compositions demonstrate that retrograde silica solubility is a strong driving force for quartz leaching in the temperature-pressure window of 380-450 °C and 0.5 kbar. These conditions overlap with the estimated temperatures for the initial stage of vein formation. Reaction-path models show that high-temperature alteration can produce the observed silica leaching, suggesting that

  19. The assemblage of compliance in psychiatric case management.

    PubMed

    Brodwin, Paul

    2010-08-01

    In the post-asylum era, case managers perform much of the face-to-face work of pharmaceutical compliance for people with severe and persistent mental illness. Their work demands careful orchestration of the assemblage of compliance, including the actual medications, the ideology of biopsychiatry, the division of professional labor, and certain mundane tools. Ethnographic vignettes from an Assertive Community Treatment (ACT) team show how case managers use this assemblage in their everyday routines, but also how it undercuts key elements of the original ACT mission. Reflecting its roots in the deinstitutionalization movement, the ACT model gives case managers limitless responsibilities for clients' lives, but then narrowly defines their role as the prosthetic extension of psychiatric authority. To produce compliance, case managers depend on the medication cassette, analyzed here as a human/non-human hybrid woven into their ordinary work. The medication cassette has pre-scripted uses that enlist clinicians in biopsychiatric thinking and also silently impose compliant behavior on clients. The elements in the assemblage of compliance depend on each other, but they do not form a seamless whole, as evidenced by the dilemmas and micropolitics of the clinical front-line. Theoretical notions of assemblages and technologies of compliance, drawn from science and technology studies, illuminate a core conundrum of practice in psychiatric case management.

  20. Termite assemblages, forest disturbance and greenhouse gas fluxes in Sabah, East Malaysia.

    PubMed

    Eggleton, P; Homathevi, R; Jones, D T; MacDonald, J A; Jeeva, D; Bignell, D E; Davies, R G; Maryati, M

    1999-11-29

    A synthesis is presented of sampling work conducted under a UK government-funded Darwin Initiative grant undertaken predominantly within the Danum Valley Conservation Area (DVCA), Sabah, East Malaysia. The project concerned the assemblage structure, gas physiology and landscape gas fluxes of termites in pristine and two ages of secondary, dipterocarp forest. The DVCA termite fauna is typical of the Sunda region, dominated by Termes-group soil-feeders and Nasutitermitinae. Selective logging appears to have relatively little effect on termite assemblages, although soil-feeding termites may be moderately affected by this level of disturbance. Species composition changes, but to a small extent when considered against the background level of compositional differences within the Sunda region. Physiologically the assemblage is very like others that have been studied, although there are some species that do not fit on the expected body size-metabolic rate curve. As elsewhere, soil-feeders and soil-wood interface-feeders tend to produce more methane. As with the termite assemblage characteristics, gross gas and energy fluxes do not differ significantly between logged and unlogged sites. Although gross methane fluxes are high, all the soils at DVCA were methane sinks, suggesting that methane oxidation by methanotrophic bacteria was a more important process than methane production by gut archaea. This implies that methane production by termites in South-East Asia is not contributing significantly to the observed increase in levels of methane production worldwide. Biomass density, species richness, clade complement and energy flow were much lower at DVCA than at a directly comparable site in southern Cameroon. This is probably due to the different biogeographical histories of the areas.

  1. Giardia intestinalis Assemblages A and B Infections in Nepal

    PubMed Central

    Singh, Anjana; Janaki, Lalitha; Petri, William A.; Houpt, Eric R.

    2012-01-01

    Giardia intestinalis is comprised of two major genotypes, A and B, which may vary in their propensity to cause disease. We tested for the presence of these two genotypes in stool samples from patients with gastrointestinal symptoms in Nepal. A total of 1,096 clinical specimens were screened by microscopy, and 45 samples with G. intestinalis were identified. Giardia infection was confirmed in 35 of 45 samples by a Giardia specific real-time polymerase chain reaction (PCR) assay. Genotyping of the Giardia PCR product by restriction fragment length polymorphism indicated that 74% (26 of 35) were assemblage B, 20% (7 of 35) were assemblage A, and 6% (2 of 35) were mixed assemblages. PMID:19706929

  2. Mineral deposit densities for estimating mineral resources

    USGS Publications Warehouse

    Singer, Donald A.

    2008-01-01

    Estimates of numbers of mineral deposits are fundamental to assessing undiscovered mineral resources. Just as frequencies of grades and tonnages of well-explored deposits can be used to represent the grades and tonnages of undiscovered deposits, the density of deposits (deposits/area) in well-explored control areas can serve to represent the number of deposits. Empirical evidence presented here indicates that the processes affecting the number and quantity of resources in geological settings are very general across many types of mineral deposits. For podiform chromite, porphyry copper, and volcanogenic massive sulfide deposit types, the size of tract that geologically could contain the deposits is an excellent predictor of the total number of deposits. The number of mineral deposits is also proportional to the type’s size. The total amount of mineralized rock is also proportional to size of the permissive area and the median deposit type’s size. Regressions using these variables provide a means to estimate the density of deposits and the total amount of mineralization. These powerful estimators are based on analysis of ten different types of mineral deposits (Climax Mo, Cuban Mn, Cyprus massive sulfide, Franciscan Mn, kuroko massive sulfide, low-sulfide quartz-Au vein, placer Au, podiform Cr, porphyry Cu, and W vein) from 108 permissive control tracts around the world therefore generalizing across deposit types. Despite the diverse and complex geological settings of deposit types studied here, the relationships observed indicate universal controls on the accumulation and preservation of mineral resources that operate across all scales. The strength of the relationships (R 2=0.91 for density and 0.95 for mineralized rock) argues for their broad use. Deposit densities can now be used to provide a guideline for expert judgment or used directly for estimating the number of most kinds of mineral deposits.

  3. Phosphatized algal-bacterial assemblages in Late Cretaceous phosphorites of the Voronezh Anteclise

    NASA Astrophysics Data System (ADS)

    Maleonkina, Svetlana Y.

    2003-01-01

    Late Cretaceous phosphogenesis of the Voronezh Anteclise has occurred during Cenomanian and Early Campanian. SEM studies show the presence of phosphatized algal-bacterial assemblages both in Cenomanian and Campanian phosphorites. In some Cenomanian nodular phosphorite samples revealed empty tubes 1 - 5 microns in diameter, which are most likely trichomes of cyanobacterial filaments. Other samples contained accumulations of spheres 0,5-3 microns, similar to coccoidal bacteria. Complicated tubular forms with variable diameter 2 - 5 microns occur on surface of some quartz grains in nodules. They are probably pseudomorphs after algae. We found similar formations in the Campanian phosphate grains. Frequently, grain represents a cyanobacterial mat, which is sometimes concentrically coated by phosphatic films. The films of some grains retain the primary structure, their concentric layers are formed by pseudomorphs after different bacterial types and obviously they represent oncolite. In other cases, the primary structure is unobservable because of recrystallization process erases them. Occasionally, the central part retains the coccoidal structure and the recrystallization affects only films. Besides the core of such oncolite can be represented not only by phosphatic grain, but also by grains of other minerals, such as quartz, glauconite and heavy minerals, which serve as a substrate for cyanobacterial colonies. Bacteria also could settle on cavity surfaces and interiors frames of sponge fragments, teeth and bones.

  4. Fish assemblages in borrow-pit lakes of the Lower Mississippi River

    USGS Publications Warehouse

    Miranda, Leandro E.; Killgore, K. J.; Hoover, J.J.

    2013-01-01

    Borrow-pit lakes encompass about a third of the lentic water habitats (by area) in the active floodplain of the Lower Mississippi River, yet little is known about their fish assemblages. We investigated whether fish assemblages supported by borrow-pit lakes resembled those in oxbow lakes to help place the ecological relevance of borrow-pit lakes in context with that of natural floodplain lakes. In all, we collected 75 fish species, including 65 species in eight borrow-pit lakes, 52 species in four riverside oxbow lakes, and 44 species in eight landside oxbow lakes. Significant differences in several species richness metrics were evident between borrow-pit lakes and landside oxbow lakes but not between borrow-pit lakes and riverside oxbow lakes. All three lake types differed in fish assemblage composition. Borrow-pit lakes and riverside oxbow lakes tended to include a greater representation of fish species that require access to diverse environments, including lentic, lotic, and palustrine habitats; fish assemblages in landside oxbow lakes included a higher representation of lacustrine species. None of the fish species collected in borrow-pit lakes was federally listed as threatened or endangered, but several were listed as species of special concern by state governments in the region, suggesting that borrow-pit lakes provide habitat for sensitive riverine and wetland fish species. Differences in fish assemblages among borrow-pit lakes were linked to engineered morphologic features, suggesting that diversity in engineering can contribute to diversity in fish assemblages; however, more research is needed to match engineering designs with fish assemblage structures that best meet conservation needs.

  5. The zoonotic potential of Giardia intestinalis assemblage E in rural settings.

    PubMed

    Abdel-Moein, Khaled A; Saeed, Hossam

    2016-08-01

    Giardiasis is a globally re-emerging protozoan disease with veterinary and public health implications. The current study was carried out to investigate the zoonotic potential of livestock-specific assemblage E in rural settings. For this purpose, a total of 40 microscopically positive Giardia stool samples from children with gastrointestinal complaints with or without diarrhea were enrolled in the study as well as fecal samples from 46 diarrheic cattle (18 dairy cows and 28 calves). Animal samples were examined by sedimentation method to identify Giardia spp., and then, all Giardia positive samples from human and animals were processed for molecular detection of livestock-specific assemblage E through amplification of assemblage-specific triosephosphate isomerase (tpi) gene using nested polymerase chain reaction (PCR). The results of the study revealed high unexpected occurrence of assemblage E among human samples (62.5 %), whereas the distribution among patients with diarrhea and those without was 42.1 and 81 %, respectively. On the other hand, the prevalence of Giardia spp. among diarrheic dairy cattle was (8.7 %), while only calves yielded positive results (14.3 %) and all bovine Giardia spp. were genetically classified as Giardia intestinalis assemblage E. Moreover, DNA sequencing of randomly selected one positive human sample and another bovine one revealed 100 and 99 % identity with assemblage E tpi gene sequences available at GenBank after BLAST analysis. In conclusion, the current study highlights the wide dissemination of livestock-specific assemblage E among humans in rural areas, and thus, zoonotic transmission cycle should not be discounted during the control of giardiasis in such settings.

  6. Non-photochemical quenching in epipsammic and epipelic microalgal assemblages from two marine ecosystems

    NASA Astrophysics Data System (ADS)

    Pniewski, Filip F.; Richard, Pierre; Latała, Adam; Blanchard, Gerard

    2017-03-01

    This work presents differences in the non-photochemical quenching of chlorophyll fluorescence (NPQ) formation and its further dark relaxation between two microphytobenthos types, i.e. epipelon from Aiguillon Bay on the Atlantic coast and epipsammon from Puck Bay in the Baltic Sea. NPQ was characterized by the induction kinetics and light-response curves subsequently compared to the light-response curves of PSII relative electron transport rate (rETR), measured on assemblages collected in summer (July/August) and autumn (October/November). Both assemblages differed in species composition. Epipelon was exclusively composed of motile bi-raphid diatoms, while in epipsammon next to small-sized diatoms species other taxonomic groups such as green algae, euglenophytes and blue-green algae were also present. The study confirmed that epipelon was low light acclimated, while epipsammon showed features of high light acclimation. In both assemblage types a clear seasonal shift in photoprotection capacity was observed. Higher NPQ values were always observed in summer. In epipelon, the maximum NPQ (NPQmax) inferred from the NPQ light-response curves reached the value above 11; in epipsammon, NPQmax was up to the value of 4. The NPQ induction kinetics together with the light stress-recovery analysis suggested the presence of different photoprotective mechanisms in the studied microphytobenthos communities. In epipsammon photoprotection was assumed to be mostly dependent on the activity of the xanthophyll cycle, while in epipelon other processes also contributed to the overall photoprotection. Neither epipelon nor epipsammon showed compelling signs of photoinhibition. By comparing the NPQ and rETR light-response curves it was shown that in high light acclimated epipsammon NPQ promptly responded to changes in light conditions. A weak relationship between NPQ development and photochemistry emphasized the importance of behavioural photoprotection in low light acclimated epipelon

  7. Yield surfaces for frictional sphere assemblages

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Goddard, J.D.; Didwania, A.K.

    1995-12-31

    By means of a recently developed computer algorithm for simulation of the quasi-static I mechanics of sphere assemblages, we have performed extensive computations of the dilatancy and plasticity of such systems for various proportional loading histories. We have investigated the effect of initial packing density or void ratio, size polydispersity, friction coefficient and plastic strain on the evolution of the yield surface. We find that all the yield surfaces tend to an asymptotic form which is well represented by the Lade-Duncan yield surface, developed originally for sand, suggesting that the Lade-Duncan form may reflect some universality in the behavior ofmore » assemblages of rigid frictional particles.« less

  8. Mineralogical compositions of fault rocks from surface ruptures of Wenchuan earthquake and implication of mineral transformation during the seismic cycle along Yingxiu-Beichuan fault, Sichuan Province, China

    NASA Astrophysics Data System (ADS)

    Dang, Jiaxiang; Zhou, Yongsheng; He, Changrong; Ma, Shengli

    2018-06-01

    There are two co-seismic bedrock surface ruptures from the Mw 7.9 Wenchuan earthquake in the northern and central parts of the Beichuan-Yingxiu fault, Sichuan Province, southwest China. In this study, we report on the macrostructure of the fault rocks and results from X-ray powder diffraction analysis of minerals from rocks in the fault zone. The most recent fault gouge (the gouge produced by the most recent co-seismic fault movement) in all the studied outcrops is dark or grayish-black, totally unconsolidated and ultrafine-grained. Older fault gouges in the same outcrops are grayish or yellowish and weakly consolidated. X-ray powder diffraction analysis results show that mineral assemblages in both the old fault gouge and the new fault gouge are more complicated than the mineral assemblages in the bedrock as the fault gouge is rich in clay minerals. The fault gouge inherited its major rock-forming minerals from the parent rocks, but the clay minerals in the fault gouge were generated in the fault zone and are therefore authigenic and synkinematic. In profiles across the fault, clay mineral abundances increase as one traverses from the bedrock to the breccia to the old gouge and from the old gouge to the new gouge. Quartz and illite are found in all collected gouge samples. The dominant clay minerals in the new fault gouge are illite and smectite along the northern part of the surface rupture and illite/smectite mixed-layer clay in the middle part of the rupture. Illite/smectite mixed-layer clay found in the middle part of the rupture indicates that fault slip was accompanied by K-rich fluid circulation. The existence of siderite, anhydrite, and barite in the northern part of the rupture suggests that fault slip at this locality was accompanied by acidic fluids containing ions of Fe, Ca, and Ba.

  9. Translanguaging and Semiotic Assemblages

    ERIC Educational Resources Information Center

    Pennycook, Alastair

    2017-01-01

    This paper asks what translanguaging could start to look like if it incorporated an expanded version of language and questioned not only to the borders between languages but also the borders between semiotic modes. Developing the idea of spatial repertoires and assemblages, and looking at data from a Bangladeshi-owned corner shop, this paper…

  10. Habitat association of larval fish assemblages in the northern Persian Gulf.

    PubMed

    Rabbaniha, Mahnaz; Molinero, Juan Carlos; López-López, Lucia; Javidpour, Jamileh; Primo, Ana Ligia; Owfi, Feryadoon; Sommer, Ulrich

    2015-08-15

    We examined the habitat use of fish larvae in the northern Persian Gulf from July 2006 to June 2007. Correspondence Analysis showed significant differences between hydrological seasons in habitat use and structure of larval fish assemblages, while no differences were found regarding abundance among coralline and non-coralline habitats. The observed configuration resulted in part from seasonal reproductive patterns of dominant fish influencing the ratio pelagic:demersal spawned larvae. The ratio increased along with temperature and chlorophyll-a concentration, which likely fostered the reproduction of pelagic spawner fish. The close covariation with temperature throughout hydrographic seasons suggests a leading role of temperature in the seasonal structure of larvae assemblages. Our results provide new insights on fish larval ecology in a traditionally sub-sampled and highly exposed zone to anthropogenic pollution, the northern Persian Gulf, and highlight the potential role of Khark and Kharko Islands in conservation and fishery management in the area. Copyright © 2015 Elsevier Ltd. All rights reserved.

  11. Long-term trends in the structure of eastern Adriatic littoral fish assemblages: Consequences for fisheries management

    NASA Astrophysics Data System (ADS)

    Stagličić, N.; Matić-Skoko, S.; Pallaoro, A.; Grgičević, R.; Kraljević, M.; Tutman, P.; Dragičević, B.; Dulčić, J.

    2011-09-01

    Long-term interannual changes in abundance, biomass, diversity and structure of littoral fish assemblages were examined between 1993 and 2009 by experimental trammel net fishing up to six times per year, within the warm period - May to September, at multiple areas along the eastern Adriatic coast with the aim of testing for the consistency of patterns of change across a large spatial scale (˜600 km). The results revealed spatially consistent increasing trends of total fish abundance and biomass growing at an average rate of 15 and 14% per year, respectively. Of the diversity indices analysed, the same pattern of variability was observed for Shannon diversity, while Pielou evenness and average taxonomic distinctness measures Δ ∗ and Δ + showed spatial variability with no obvious temporal trends. Multivariate fish assemblage structure underwent a directional change displaying a similar pattern through time for all the areas. The structural change in fish assemblages generally involved most of the species present in trammel net catches. A large pool of fish species responsible for producing the temporal pattern of assemblage change was relatively different in each of the areas reflecting a large geographic range covered by the study. An analysis of 4 fish species ( Symphodus tinca, Pagellus erythrinus, Mullus surmuletus, Scorpaena porcus) common to each of the study areas as the ones driving the temporal change indicated that there were clear increasing trends of their mean catches across the years at all the study areas. A common pattern among time trajectories across the spatial scale studied implies that the factor affecting the littoral fish assemblages is not localised but regional in nature. As an underlying factor having the potential to induce such widespread and consistent improvements in littoral fish assemblages, a more restrictive artisanal fishery management that has progressively been put in place during the study period, is suggested and discussed.

  12. Prevalence of Giardia duodenalis assemblages in weaned cattle on cow-calf operations in the United States.

    PubMed

    Santin, Monica; Dargatz, David; Fayer, Ronald

    2012-02-10

    To determine the prevalence of Giardia duodenalis in weaned beef calves on cow-calf operations in the United States, fecal specimens were collected from 819 calves (6-18 months of age) from 49 operations. After cleaning and concentration procedures to maximize recovery of cysts from feces, DNA was extracted from each of the 819 specimens. The presence of G. duodenalis was determined by nested PCR of a fragment of the SSU rRNA gene. All positive PCR products were subjected to sequence analysis. The overall sample level prevalence of Giardia was 33.5% with prevalence ranging from 0 to 100% among operations. The highest within herd prevalence of infected beef calves was found in one cow-calf operation from the South region (100%), followed by a cow-calf operation from the West region (90%), and three cow-calf operations from the Midwest region (87.5, 85, and 85%). Giardia was not detected in samples from 7 operations including 5 cow-calf operations from the South region, and 1 cow-calf operation each from the Midwest and West regions. Molecular analysis of the Giardia-positive samples identified assemblage E (or E-like) in 31.7% of all samples (260/819) and assemblage A in 1.2% (10/819). A mixed infection with assemblages A and E was observed in four calves from an operation in Midwest region. The potentially zoonotic assemblage A was detected in specimens from four operations in Midwest region. These findings indicate that most G. duodenalis found in weaned beef calves was assemblage E which represents no known zoonotic threat. However, the presence of assemblage A in a small number of animals poses a potential risk of infection to humans. Published by Elsevier B.V.

  13. Postmagmatic magnetite-apatite assemblage in mafic intrusions: a case study of dolerite at Olympic Dam, South Australia

    NASA Astrophysics Data System (ADS)

    Apukhtina, Olga B.; Kamenetsky, Vadim S.; Ehrig, Kathy; Kamenetsky, Maya B.; McPhie, Jocelyn; Maas, Roland; Meffre, Sebastien; Goemann, Karsten; Rodemann, Thomas; Cook, Nigel J.; Ciobanu, Cristiana L.

    2016-01-01

    An assemblage of magnetite and apatite is common worldwide in different ore deposit types, including disparate members of the iron-oxide copper-gold (IOCG) clan. The Kiruna-type iron oxide-apatite deposits, a subtype of the IOCG family, are recognized as economic targets as well. A wide range of competing genetic models exists for magnetite-apatite deposits, including magmatic, magmatic-hydrothermal, hydrothermal(-metasomatic), and sedimentary(-exhalative). The sources and mechanisms of transport and deposition of Fe and P remain highly debatable. This study reports petrographic and geochemical features of the magnetite-apatite-rich vein assemblages in the dolerite dykes of the Gairdner Dyke Swarm (~0.82 Ga) that intruded the Roxby Downs Granite (~0.59 Ga), the host of the supergiant Olympic Dam IOCG deposit. These symmetrical, only few mm narrow veins are prevalent in such dykes and comprise besides usually colloform magnetite and prismatic apatite also further minerals (e.g., calcite, quartz). The genetic relationships between the veins and host dolerite are implied based on alteration in the immediate vicinity (~4 mm) of the veins. In particular, Ti-magnetite-ilmenite is partially to completely transformed to titanite and magmatic apatite disappears. We conclude that the mafic dykes were a local source of Fe and P re-concentrated in the magnetite-apatite veins. Uranium-Pb ages for vein apatite and titanite associated with the vein in this case study suggest that alteration of the dolerite and healing of the fractures occurred shortly after dyke emplacement. We propose that in this particular case the origin of the magnetite-apatite assemblage is clearly related to hydrothermal alteration of the host mafic magmatic rocks.

  14. Mass coral bleaching causes biotic homogenization of reef fish assemblages.

    PubMed

    Richardson, Laura E; Graham, Nicholas A J; Pratchett, Morgan S; Eurich, Jacob G; Hoey, Andrew S

    2018-04-06

    Global climate change is altering community composition across many ecosystems due to nonrandom species turnover, typically characterized by the loss of specialist species and increasing similarity of biological communities across spatial scales. As anthropogenic disturbances continue to alter species composition globally, there is a growing need to identify how species responses influence the establishment of distinct assemblages, such that management actions may be appropriately assigned. Here, we use trait-based analyses to compare temporal changes in five complementary indices of reef fish assemblage structure among six taxonomically distinct coral reef habitats exposed to a system-wide thermal stress event. Our results revealed increased taxonomic and functional similarity of previously distinct reef fish assemblages following mass coral bleaching, with changes characterized by subtle, but significant, shifts toward predominance of small-bodied, algal-farming habitat generalists. Furthermore, while the taxonomic or functional richness of fish assemblages did not change across all habitats, an increase in functional originality indicated an overall loss of functional redundancy. We also found that prebleaching coral composition better predicted changes in fish assemblage structure than the magnitude of coral loss. These results emphasize how measures of alpha diversity can mask important changes in the structure and functioning of ecosystems as assemblages reorganize. Our findings also highlight the role of coral species composition in structuring communities and influencing the diversity of responses of reef fishes to disturbance. As new coral species configurations emerge, their desirability will hinge upon the composition of associated species and their capacity to maintain key ecological processes in spite of ongoing disturbances. © 2018 John Wiley & Sons Ltd.

  15. Patterns in reef fish assemblages: Insights from the Chagos Archipelago

    PubMed Central

    Roche, Ronan; Koldewey, Heather; Turner, John

    2018-01-01

    Understanding the drivers of variability in the composition of fish assemblages across the Indo-Pacific region is crucial to support coral reef ecosystem resilience. Whilst numerous relationships and feedback mechanisms between the functional roles of coral reef fishes and reef benthic composition have been investigated, certain key groups, such as the herbivores, are widely suggested to maintain reefs in a coral-dominated state. Examining links between fishes and reef benthos is complicated by the interactions between natural processes, disturbance events and anthropogenic impacts, particularly fishing pressure. This study examined fish assemblages and associated benthic variables across five atolls within the Chagos Archipelago, where fishing pressure is largely absent, to better understand these relationships. We found high variability in fish assemblages among atolls and sites across the archipelago, especially for key groups such as a suite of grazer-detritivore surgeonfish, and the parrotfishes which varied in density over 40-fold between sites. Differences in fish assemblages were significantly associated with variable levels of both live and recently dead coral cover and rugosity. We suggest these results reflect differing coral recovery trajectories following coral bleaching events and a strong influence of ‘bottom-up’ control mechanisms on fish assemblages. Species level analyses revealed that Scarus niger, Acanthurus nigrofuscus and Chlorurus strongylocephalos were key species driving differences in fish assemblage structure. Clarifying the trophic roles of herbivorous and detritivorous reef fishes will require species-level studies, which also examine feeding behaviour, to fully understand their contribution in maintaining reef resilience to climate change and fishing impacts. PMID:29351566

  16. Patterns in reef fish assemblages: Insights from the Chagos Archipelago.

    PubMed

    Samoilys, Melita; Roche, Ronan; Koldewey, Heather; Turner, John

    2018-01-01

    Understanding the drivers of variability in the composition of fish assemblages across the Indo-Pacific region is crucial to support coral reef ecosystem resilience. Whilst numerous relationships and feedback mechanisms between the functional roles of coral reef fishes and reef benthic composition have been investigated, certain key groups, such as the herbivores, are widely suggested to maintain reefs in a coral-dominated state. Examining links between fishes and reef benthos is complicated by the interactions between natural processes, disturbance events and anthropogenic impacts, particularly fishing pressure. This study examined fish assemblages and associated benthic variables across five atolls within the Chagos Archipelago, where fishing pressure is largely absent, to better understand these relationships. We found high variability in fish assemblages among atolls and sites across the archipelago, especially for key groups such as a suite of grazer-detritivore surgeonfish, and the parrotfishes which varied in density over 40-fold between sites. Differences in fish assemblages were significantly associated with variable levels of both live and recently dead coral cover and rugosity. We suggest these results reflect differing coral recovery trajectories following coral bleaching events and a strong influence of 'bottom-up' control mechanisms on fish assemblages. Species level analyses revealed that Scarus niger, Acanthurus nigrofuscus and Chlorurus strongylocephalos were key species driving differences in fish assemblage structure. Clarifying the trophic roles of herbivorous and detritivorous reef fishes will require species-level studies, which also examine feeding behaviour, to fully understand their contribution in maintaining reef resilience to climate change and fishing impacts.

  17. Aquatic insect assemblages associated with subalpine stream segment types in relict glaciated headwaters

    USGS Publications Warehouse

    Kubo, Joshua S.; Torgersen, Christian E.; Bolton, Susan M.; Weekes, Anne A.; Gara, Robert I.

    2013-01-01

    1. Aquatic habitats and biotic assemblages in subalpine headwaters are sensitive to climate and human impacts. Understanding biotic responses to such perturbations and the contribution of high-elevation headwaters to riverine biodiversity requires the assessment of assemblage composition among habitat types. We compared aquatic insect assemblages among headwater stream segment types in relict glaciated subalpine basins in Mt. Rainier National Park, Washington, USA. 2. Aquatic insects were collected during summer and autumn in three headwater basins. In each basin, three different stream segment types were sampled: colluvial groundwater sources, alluvial lake inlets, and cascade-bedrock lake outlets. Ward's hierarchical cluster analysis revealed high β diversity in aquatic insect assemblages, and non-metric multidimensional scaling indicated that spatial and temporal patterns in assemblage composition differed among headwater stream segment types. Aquatic insect assemblages showed more fidelity to stream segment types than to individual basins, and the principal environmental variables associated with assemblage structure were temperature and substrate. 3. Indicator species analyses identified specific aquatic insects associated with each stream segment type. Several rare and potentially endemic aquatic insect taxa were present, including the recently described species, Lednia borealis (Baumann and Kondratieff). 4. Our results indicate that aquatic insect assemblages in relict glaciated subalpine headwaters were strongly differentiated among stream segment types. These results illustrate the contribution of headwaters to riverine biodiversity and emphasise the importance of these habitats for monitoring biotic responses to climate change. Monitoring biotic assemblages in high-elevation headwaters is needed to prevent the potential loss of unique and sensitive biota.

  18. Temporal variation in the organization of a Neotropical assemblage of leaf-nosed bats (Chiroptera: Phyllostomidae)

    NASA Astrophysics Data System (ADS)

    Ribeiro Mello, Marco Aurelio

    2009-03-01

    In the present study, I described the organization of a Neotropical bat assemblage, and tested whether this organization was variable in time. In an Atlantic Forest reserve in southeastern Brazil bats were captured monthly with mist nets over 4 years, and individuals were classified into guilds. I analyzed only leaf-nosed bats, and observed that guilds of fruit-eating bats dominated the assemblage. This pattern was repeated across months and years. However, among frugivores, canopy and understory guilds peaked during different months, but in both cases during the rainy season, while variation among habitat-opportunistic species was not explained by rainfall. The most reliable ecological service delivered by phyllostomid bats in the area is seed dispersal, although other services may be also important in particular seasons. My results suggest that the observed patterns of temporal species turnover are related to the abundance of preferred food items.

  19. Mnemiopsis leidyi Gut Harbors Seasonally Variant and Commensal Microbial Assemblages

    NASA Astrophysics Data System (ADS)

    Mariita, R. M.; Hossain, M. J.; Liles, M. R.; Moss, A.

    2016-02-01

    Studies have shown that with widespread use of antibiotics in human and domestic animal populations, antibiotic resistance becomes increasingly common in the environment. Estuaries provide ideal conditions for acquisition and dissemination of drug resistance genes because they serve as sinks for pollution. This study aimed to identify M. leidyi microbial diversity and richness and their potential to act as vectors for antibiotic resistance determinants (ARDs). M. leidyi, although native to study area are highly invasive. Metagenomic analyses indicate that there are temporal variations of bacterioplankton assemblages in M. leidyi gut. Overall, Proteobacteria and Actinobacteria are the most abundant phyla. Despite the temporal dynamics in the microbial assemblages in M. leidyi gut, they seem to retain Propionibacterium acnes (gut microbiota in some insects) and select proteobacteria across all seasons. The results contradict previous studies that suggest that M. leidyi does not have constant a microbiota, but only seasonally variant microbial assemblages. Here we reveal the presence of M. leidyi gut ARDs in winter and summer, probably because of the ctenophores' positive geotaxis during rough surface conditions. Genes responsible for resistance to fluoroquinolones, multidrug resistance efflux pumps, mercuric reductase, copper homeostasis and blaR1 genes were observed. This is the first study to demonstrate that M. leidyi harbors constant microbiota and provides a baseline for understanding M. leidyi gut microbial and ARDs ecology. It also suggests that M. leidyi bacterial taxonomic and functional dynamics is influenced by season. Funding: Alabama EPSCoR GRSP fellowship, AU-CMB fellowship, NSF EPS-1158862, USDA-Hatch 370225-310100 (AGM, ML).

  20. Effect of soil metal contamination on glyphosate mineralization: role of zinc in the mineralization rates of two copper-spiked mineral soils.

    PubMed

    Kim, Bojeong; Kim, Young Sik; Kim, Bo Min; Hay, Anthony G; McBride, Murray B

    2011-03-01

    A systematic investigation into lowered degradation rates of glyphosate in metal-contaminated soils was performed by measuring mineralization of [(14)C]glyphosate to (14)CO(2) in two mineral soils that had been spiked with Cu and/or Zn at various loadings. Cumulative (14)CO(2) release was estimated to be approximately 6% or less of the amount of [(14)C]glyphosate originally added in both soils over an 80-d incubation. For all but the highest Cu treatments (400 mg kg(-1)) in the coarse-textured Arkport soil, mineralization began without a lag phase and declined over time. No inhibition of mineralization was observed for Zn up to 400 mg kg(-1) in either soil, suggesting differential sensitivity of glyphosate mineralization to the types of metal and soil. Interestingly, Zn appeared to alleviate high-Cu inhibition of mineralization in the Arkport soil. The protective role of Zn against Cu toxicity was also observed in the pure culture study with Pseudomonas aeruginosa, suggesting that increased mineralization rates in high Cu soil with Zn additions might have been due to alleviation of cellular toxicity by Zn rather than a mineralization specific mechanism. Extensive use of glyphosate combined with its reduced degradation in Cu-contaminated, coarse-textured soils may increase glyphosate persistence in soil and consequently facilitate Cu and glyphosate mobilization in the soil environment. Copyright © 2010 SETAC.

  1. Spatial and temporal variability in the structure of invertebrate assemblages in control stream mesocosms.

    PubMed

    Wong, Diana C L; Maltby, Lorraine; Whittle, Don; Warren, Philip; Dorn, Philip B

    2004-01-01

    Outdoor stream mesocosm studies conducted between 1992 and 1996 at two facilities enabled the investigation of structural variability in invertebrate assemblages within and between studies. Temporal variability of benthic invertebrate assemblages between eight replicate streams within a study was assessed in a 28-day mesocosm study without chemical treatment. Cluster analysis, non-metric multidimensional scaling, and principal component analysis each showed the untreated assemblages as structurally distinct groups on the three sampling days. The assemblages between the eight replicate streams showed >88% Bray-Curtis similarity at any one time during the study. In addition, pre-treatment data from a series of four studies conducted at one facility were used to examine structural variability in the starting benthic invertebrate assemblages between studies. Invertebrate assemblages were structurally distinct at the start of each mesocosm study conducted in different years at the same facility and the taxa responsible for differences in the assemblages were also different each year. The implications of temporal and spatial variability in benthic invertebrate assemblages within and between mesocosm studies with regards to species sensitivity and study repeatability should be considered when results of such studies are used in risk assessment.

  2. Abiotic versus biotic iron mineral transformation studied by a miniaturized backscattering Mössbauer spectrometer (MIMOS II), X-ray diffraction and Raman spectroscopy

    NASA Astrophysics Data System (ADS)

    Markovski, C.; Byrne, J. M.; Lalla, E.; Lozano-Gorrín, A. D.; Klingelhöfer, G.; Rull, F.; Kappler, A.; Hoffmann, T.; Schröder, C.

    2017-11-01

    Searching for biomarkers or signatures of microbial transformations of minerals is a critical aspect for determining how life evolved on Earth, and whether or not life may have existed in other planets, including Mars. In order to solve such questions, several missions to Mars have sought to determine the geochemistry and mineralogy on the Martian surface. This research includes the two miniaturized Mössbauer spectrometers (MIMOS II) on board the Mars Exploration Rovers Spirit and Opportunity, which have detected a variety of iron minerals on Mars, including magnetite (Fe2+Fe3+2O4) and goethite (α-FeO(OH)). On Earth, both minerals can derive from microbiological activity (e.g. through dissimilatory iron reduction of ferrihydrite by Fe(III)-reducing bacteria). Here we used a lab based MIMOS II to characterize the mineral products of biogenic transformations of ferrihydrite to magnetite by the Fe(III)-reducing bacteria Geobacter sulfurreducens. In combination with Raman spectroscopy and X-ray diffraction (XRD), we observed the formation of magnetite, goethite and siderite. We compared the material produced by biogenic transformations to abiotic samples in order to distinguish abiotic and biotic iron minerals by techniques that are or will be available onboard Martian based laboratories. The results showed the possibility to distinguish the abiotic and biotic origin of the minerals. Mossbauer was able to distinguish the biotic/abiotic magnetite with the interpretation of the geological context (Fe content mineral assemblages and accompanying minerals) and the estimation of the particle size in a non-destructive way. The Raman was able to confirm the biotic/abiotic principal peaks of the magnetite, as well as the organic principal vibration bands attributed to the bacteria. Finally, the XRD confirmed the particle size and mineralogy.

  3. Diversity and abundance of invertebrate epifaunal assemblages associated with gorgonians are driven by colony attributes

    NASA Astrophysics Data System (ADS)

    Cúrdia, João; Carvalho, Susana; Pereira, Fábio; Guerra-García, José Manuel; Santos, Miguel N.; Cunha, Marina R.

    2015-06-01

    The present study aimed to explicitly quantify the link between the attributes of shallow-water gorgonian colonies (Octocorallia: Alcyonacea) and the ecological patterns of associated non-colonial epifaunal invertebrates. Based on multiple regression analysis, we tested the contribution of several attributes (colony height, width, and area, fractal dimension as a measure of colony complexity, lacunarity as a measure of the heterogeneity, and "colonial" epibiont cover) to abundance and taxonomic richness of associated assemblages. The results highlight the variation in the response of epifaunal assemblages to the gorgonian colony characteristics. The nature and intensity of the relationships were gorgonian species-dependent and varied from one taxonomic group to another. For both gorgonian species analyzed, the strongest predictor of species richness and abundance of the epifaunal assemblages was "colonial" epibiont cover, possibly due to a trophic effect (direct or indirect enhancement of food availability) combined with the surface available for colonization (species-area effect). Although structural complexity is usually indicated as the main driver for rich and abundant coral-associated assemblages, no significant relationship was observed between fractal dimension and the community descriptors; lacunarity, which reflects the sizes of the inter-branch spaces, was only linked to taxonomic richness in the assemblages associated with Leptogorgia lusitanica. The validity of the paradigm that structural complexity enhances biodiversity may be scale-dependent. In the case of gorgonians, the effect of complexity at the "garden" level may be more relevant than at the individual colony level. This reinforces the need for the conservation of gorgonian aggregation areas as a whole in order to preserve host diversity and size structure.

  4. Fish assemblage structure in an Oklahoma Ozark stream before and after rainbow trout introduction

    USGS Publications Warehouse

    Walsh, M.G.; Winkelman, D.L.

    2005-01-01

    Rainbow trout Oncorhynchus mykiss have been widely stocked throughout the United States as a popular sport fish. Our study was initiated to evaluate potential effects of rainbow trout introduction on native fishes to inform future decisions about trout stocking in northeastern Oklahoma streams. We sampled fish assemblages in pools, glides, and riffles in Brush Creek, Delaware County, Oklahoma, from February 2000 to September 2002, and experimentally stocked rainbow trout into the stream from November 2000 to March 2001 and November 2001 to March 2002. We used a combination of multivariate analyses to evaluate seasonal and habitat effects on native fish assemblages and to compare assemblage structure between prestocking, the first year of stocking, and the second year of stocking. Mesohabitat type significantly affected assemblage structure among years, whereas we did not detect an effect of season. We did not detect differences in assemblage structure among years in glide or riffle habitats. Native fish assemblage structure in pool habitats before rainbow trout introduction differed from assemblage structure in both the first and second year of stocking. Declines in seven species, including two native game fish (smallmouth bass Micropterus dolomieu and bluegill Lepomis machrochirus), contributed to assemblage dissimilarity in pool habitats between prestocking conditions and the second year of stocking. Our results indicate that stocking rainbow trout may cause local disruption in assemblage structure in pool habitats. ?? 2004 by the American Fisheries Society.

  5. Juvenile bottlenecks and salinity shape grey mullet assemblages in Mediterranean estuaries

    NASA Astrophysics Data System (ADS)

    Cardona, Luis; Hereu, Bernat; Torras, Xavier

    2008-05-01

    Previous research has suggested that competitive bottlenecks may exist for the Mediterranean grey mullets (Osteichthyes, Mugilidae) at the fry stage with the exotic Cyprinus carpio (Osteichthyes, Cyprinidae) playing a central role. As a consequence, the structure of grey mullet assemblages at later stages is thought to reflect previous competition as well as differences in osmoregulatory skills. This paper tests that hypothesis by examining four predictions about the relative abundance of five grey mullet species in 42 Western Mediterranean estuary sites from three areas (Aiguamolls de l'Empordà, Ebro Delta and Minorca) differing in the salinity level and occurrence of C. carpio. Field data confirmed the predictions as: (1) Liza aurata and Mugil cephalus were scarce everywhere and never dominated the assemblage; (2) Liza saliens dominated the assemblage where the salinity level was higher than 13; (3) Liza ramado always dominated the assemblage where the salinity level was lower than 13 and C. carpio was present; and (4) Chelon labrosus dominated the assemblage only where the salinity level was lower than 13 and C. carpio was absent. The catch per unit effort of C. labrosus of any size was smaller in the presence of C. carpio than where it had not been introduced, which is in agreement with the juvenile competitive bottleneck hypothesis. Discriminant analysis confirmed that the assemblage structure was linked to the salinity level and the occurrence of C. carpio for both early juveniles and late juveniles as well as adults. The data reported here reveal that the structure of grey mullet assemblages inhabiting Mediterranean estuaries is determined by salinity and competitive interactions at the fry stage.

  6. Iron mineralization and associated skarn development around southern contact of the Eğrigöz pluton (northern Menderes Massif-Turkey)

    NASA Astrophysics Data System (ADS)

    Uǧurcan, Okşan Gökçen; Oyman, Tolga

    2016-11-01

    The Eğrigöz pluton is located in the northern portion of the Menderes Massif, which is the largest known metamorphic core complex that is also characterized by large-scale extension. Kalkan and Karaağıl skarn deposits are located on the southern border of the Eğrigöz Pluton, whereas Katrandağ mineralization developed along the roof pendant. Skarnization in these three areas is associated with the peraluminous, I-type, calc-alkaline, high-K calc-alkaline Eğrigöz Pluton. Geochemical characteristics of the pluton indicate that it was generated in a continental arc setting. Kalkan, Karaağıl, and Katrandağ skarns are hosted in marble bands in two-mica gneiss of the Kalkan Formation, a locally dolomitic and clay-bearing limestone of the Arıkaya Formation and locally dolomitised limestone of the Balıkbaşı Formation, respectively. Skarn development occurred sequentially in two stages, prograde and retrograde. In Kalkan skarn, prograde stage is characterized by clinopyroxene (Di56-73 Hd26-43 Joh1-2), garnet (Adr45-69 Grs30-52 Alm0-1.4 Sps0.7-2.3), amphibole, and magnetite, whereas retrograde stage is dominated by epidote, amphibole, chlorite, quartz, and calcite. In Karaağıl, both calcic and magnesian skarn association occurred as a result of local variations in dolomite content in Arıkaya Formation. The prograde assemblage of magnesian skarn is composed chiefly of spinel, amphibole and olivine. These mineral assemblages were, partially or fully, altered to serpentine, talc, and chlorite during retrograde alteration. Mesh textures of the serpentine indicates that the serpentine was altered from olivine. Olivine was completely destroyed during retrograde alteration without relict grains remaining. Calcic skarn paragenesis include garnet (Grs36-80Adr20-62Alm0-2.2Sps0.2-2.6), clinopyroxene (Di81-92 Hd7-19 Jo0-1), and plagioclase, that belongs to the earlier stage, and amphibole of the retrograde stage. High grossular end member of the garnet probably

  7. Hydrographic processes driven by seasonal monsoon system affect siphonophore assemblages in tropical-subtropical waters (western North Pacific Ocean).

    PubMed

    Lo, Wen-Tseng; Yu, Shwu-Feng; Hsieh, Hung-Yen

    2014-01-01

    This work is a part of the Taiwan Cooperative Oceanic Fisheries Investigation, the first large scale hydrographic and plankton survey around Taiwan (21-26°N, 119-123°E). The present study examined the influence of hydrodynamic and biological variables driven by monsoon system on the siphonophore assemblages through an annual cycle in 2004. Calycophorans, namely Chelophyes appendiculata, Diphyes chamissonis, Lensia subtiloides, Bassia bassensis, and Muggiaea atlantica, were the most dominant siphonophore species. Maximum abundance of these dominant species generally occurred during the warm period (May and August), while M. atlantica had a significantly peak abundance in February. Although no apparently temporal difference in siphonophore abundance was observed in the study, siphonophore assemblage was more diverse in August than in other sampling times. Result of a cluster analysis indicated that assemblage structure of siphonophores in the waters around Taiwan varied at temporal and spatial scales during the sampling period. The intrusions of the Kuroshio Branch Current and China Coastal Current to the study area play an important role on the transportation of siphonophores. Also, the distribution of siphonophore assemblage was closely related to the hydrographic characteristics, with temperature, chlorophyll a concentration, and zooplankton abundance being the major environmental factors affecting the spatio-temporal variability of siphonophores. This study contributes substantially to the new knowledge of the siphonophore assemblage in the tropical-temperate waters of Taiwan.

  8. Hydrographic Processes Driven by Seasonal Monsoon System Affect Siphonophore Assemblages in Tropical-Subtropical Waters (Western North Pacific Ocean)

    PubMed Central

    Lo, Wen-Tseng; Yu, Shwu-Feng; Hsieh, Hung-Yen

    2014-01-01

    This work is a part of the Taiwan Cooperative Oceanic Fisheries Investigation, the first large scale hydrographic and plankton survey around Taiwan (21–26°N, 119–123°E). The present study examined the influence of hydrodynamic and biological variables driven by monsoon system on the siphonophore assemblages through an annual cycle in 2004. Calycophorans, namely Chelophyes appendiculata, Diphyes chamissonis, Lensia subtiloides, Bassia bassensis, and Muggiaea atlantica, were the most dominant siphonophore species. Maximum abundance of these dominant species generally occurred during the warm period (May and August), while M. atlantica had a significantly peak abundance in February. Although no apparently temporal difference in siphonophore abundance was observed in the study, siphonophore assemblage was more diverse in August than in other sampling times. Result of a cluster analysis indicated that assemblage structure of siphonophores in the waters around Taiwan varied at temporal and spatial scales during the sampling period. The intrusions of the Kuroshio Branch Current and China Coastal Current to the study area play an important role on the transportation of siphonophores. Also, the distribution of siphonophore assemblage was closely related to the hydrographic characteristics, with temperature, chlorophyll a concentration, and zooplankton abundance being the major environmental factors affecting the spatio-temporal variability of siphonophores. This study contributes substantially to the new knowledge of the siphonophore assemblage in the tropical-temperate waters of Taiwan. PMID:24932727

  9. Occurrence and diversity of Giardia duodenalis assemblages in livestock in the UK.

    PubMed

    Minetti, C; Taweenan, W; Hogg, R; Featherstone, C; Randle, N; Latham, S M; Wastling, J M

    2014-12-01

    Giardia duodenalis is a common intestinal parasite in humans and a wide range of livestock species. It is a genetically heterogeneous parasite that has been characterized in seven distinct genetic assemblages or cryptic species, and molecular markers can be used to differentiate both animal-specific and potentially zoonotic genotypes. Little is known about G. duodenalis and the range of assemblages occurring in domestic livestock species in the UK. Here, we present data on the occurrence and molecular diversity of G. duodenalis detected in the faeces or large intestinal contents of cattle, sheep, pigs, goats and camelids from farms in the north-west of England. Both healthy and clinically diseased animals were included in the survey. The presence of Giardia spp. and assemblages was determined by sequencing of the small-subunit ribosomal RNA gene. The potential association of infection with various clinical and epidemiological parameters was studied in cattle using both univariate and multivariate analyses. Giardia spp. were detected in 127 (34.3%) of the 370 animals tested. G. duodenalis assemblage E was found to be predominant in cattle and sheep, followed by assemblage A. Mixed infections with assemblages A and E were also detected. Interestingly, some cattle, sheep and pigs were found to be infected with more unexpected assemblages (C, D, F). Pre-weaned calves were more likely to test positive than adult animals, but no association between the occurrence of overt intestinal disease and G. duodenalis infection was detected. The common occurrence of assemblage A and the finding of unusual assemblages in atypical hosts suggest that in future, a multilocus analysis should be used to confirm the actual diversity of G. duodenalis in livestock and the presence of potentially zoonotic genotypes. These data also suggest that there is a need to re-evaluate the clinical significance of G. duodenalis infection in livestock. © 2014 The Authors. Transboundary and

  10. Demersal fish assemblages of the northeastern Chukchi Sea, Alaska

    USGS Publications Warehouse

    Barber, W.E.; Smith, R.L.; Vallarino, M.; Meyer, R.M.

    1997-01-01

    We documented the distribution and abundance of demersal fishes in the northeastern Chukchi Sea, Alaska, in 1990 and 1991, and described 1990 demersal fish assemblages and their relationship to general oceanographic features in the area. We collected samples using an otter trawl at 48 stations in 1990 and 16 in 1991, and we identified a total of 66 species in 14 families. Gadids made up 83% and 69% of the abundance in 1990 and 1991, respectively. Cottids, pleuronectids, and zoarcids together made up 15% of the species in 1990, 28% in 1991. The number of species, species diversity (H), and evenness (V') generally were greater inshore than offshore and greater in the south than in the north. There were significant differences in ranks of species, species diversity, and evenness at 3 of 8 stations sampled beth years. From data collected in 1990, 3 nearshore and 3 offshore station groupings were defined. The northern offshore assemblages had the fewest species, lowest diversity and evenness, and least abundance, whereas two southern assemblages had the most species, highest diversity and evenness, and greatest abundance. We determined that bottom salinity and percent gravel were probably the primary factors influencing assemblage arrangement.

  11. Systematic Relationships Between Lidar Observables and Sizes And Mineral Composition Of Dust Aerosols

    NASA Technical Reports Server (NTRS)

    Van Diedenhoven, Bastiaan; Stangl, Alexander; Perlwitz, Jan; Fridlind, Ann M.; Chowdhary, Jacek; Cairns, Brian

    2015-01-01

    The physical and chemical properties of soil dust aerosol particles fundamentally affect their interaction with climate, including shortwave absorption and radiative forcing, nucleation of cloud droplets and ice crystals, heterogeneous formation of sulfates and nitrates on the surface of dust particles, and atmospheric processing of iron into bioavailable forms that increase the productivity of marine phytoplankton. Lidar measurements, such as extinction-to-backscatter, color and depolarization ratios, are frequently used to distinguish between aerosol types with different physical and chemical properties. The chemical composition of aerosol particles determines their complex refractive index, hence affecting their backscattering properties. Here we present a study on how dust aerosol backscattering and depolarization properties at wavelengths of 355, 532 and 1064 nm are related to size and complex refractive index, which varies with the mineral composition of the dust. Dust aerosols are represented by collections of spheroids with a range of prolate and oblate aspect ratios and their optical properties are obtained using T-matrix calculations. We find simple, systematic relationships between lidar observables and the dust size and complex refractive index that may aid the use of space-based or airborne lidars for direct retrieval of dust properties or for the evaluation of chemical transport models using forward simulated lidar variables. In addition, we present first results on the spatial variation of forward-simulated lidar variables based on a dust model that accounts for the atmospheric cycle of eight different mineral types plus internal mixtures of seven mineral types with iron oxides, which was recently implemented in the NASA GISS Earth System ModelE2.

  12. Downstream impacts of dams: shifts in benthic invertivorous fish assemblages

    USGS Publications Warehouse

    Granzotti, Rafaela Vendrametto; Miranda, Leandro E.; Agostinho, Angelo A.; Gomes, Luiz Carlos

    2018-01-01

    Impoundments alter connectivity, sediment transport and water discharge in rivers and floodplains, affecting recruitment, habitat and resource availability for fish including benthic invertivorous fish, which represent an important link between primary producers and higher trophic levels in tropical aquatic ecosystems. We investigated long-term changes to water regime, water quality, and invertivorous fish assemblages pre and post impoundment in three rivers downstream of Porto Primavera Reservoir in south Brazil: Paraná, Baía and Ivinhema rivers. Impacts were distinct in the Paraná River, which is fully obstructed by the dam, less evident in the Baía River which is partially obstructed by the dam, but absent in the unimpounded Ivinhema River. Changes in water regime were reflected mainly as changes in water-level fluctuation with little effect on timing. Water transparency increased in the Paraná River post impoundment but did not change in the Baía and Ivinhema rivers. Changes in fish assemblages included a decrease in benthic invertivorous fish in the Paraná River and a shift in invertivorous fish assemblage structure in the Baía and Paraná rivers but not in the unimpounded Ivinhema River. Changes in water regime and water transparency, caused by impoundment, directly or indirectly impacted invertivorous fish assemblages. Alterations of fish assemblages following environmental changes have consequences over the entire ecosystem, including a potential decrease in the diversity of mechanisms for energy flow. We suggest that keeping existing unimpounded tributaries free of dams, engineering artificial floods, and intensive management of fish habitat within the floodplain may preserve native fish assemblages and help maintain functionality and ecosystem services in highly impounded rivers.

  13. Riparian influences on stream fish assemblage structure in urbanizing streams

    USGS Publications Warehouse

    Roy, A.H.; Freeman, B.J.; Freeman, Mary C.

    2007-01-01

    We assessed the influence of land cover at multiple spatial extents on fish assemblage integrity, and the degree to which riparian forests can mitigate the negative effects of catchment urbanization on stream fish assemblages. Riparian cover (urban, forest, and agriculture) was determined within 30 m buffers at longitudinal distances of 200 m, 1 km, and the entire network upstream of 59 non-nested fish sampling locations. Catchment and riparian land cover within the upstream network were highly correlated, so we were unable to distinguish between those variables. Most fish assemblage variables were related to % forest and % urban land cover, with the strongest relations at the largest spatial extent of land cover (catchment), followed by riparian land cover in the 1-km and 200-m reach, respectively. For fish variables related to urban land cover in the catchment, we asked whether the influence of riparian land cover on fish assemblages was dependent on the amount of urban development in the catchment. Several fish assemblage metrics (endemic richness, endemic:cosmopolitan abundance, insectivorous cyprinid richness and abundance, and fluvial specialist richness) were all best predicted by single variable models with % urban land cover. However, endemic:cosmopolitan richness, cosmopolitan abundance, and lentic tolerant abundance were related to % forest cover in the 1-km stream reach, but only in streams that had <15% catchment urban land cover. In these cases, catchment urbanization overwhelmed the potential mitigating effects of riparian forests on stream fishes. Together, these results suggest that catchment land cover is an important driver of fish assemblages in urbanizing catchments, and riparian forests are important but not sufficient for protecting stream ecosystems from the impacts of high levels of urbanization.

  14. Persistence of an unusual pelagic zooplankton assemblage in a clear, mountain lake

    USGS Publications Warehouse

    Larson, G.L.; Hoffman, R.L.; C. David, McIntire

    2002-01-01

    The planktonic zooplankton assemblage in Mowich Lake, Mount Rainier National Park (MORA), was composed almost entirely of rotifers in 1966 and 1967. Adult pelagic crustacean taxa were rare. Their paucity was attributed to predation by kokanee salmon (Oncorhynchus nerka), which had been stocked in 1961. During a park-wide survey of 24 lakes in 1988, Mowich Lake was the only one that did not contain at least one planktonic crustacean species. Given the apparent persistence of the unusual pelagic zooplankton assemblage in Mowich Lake, the first objective of this study was to document the interannual variation in the taxonomic structure of the zooplankton assemblages in the lake from 1988 through 1999. A second objective was to determine if it was possible to predict the taxonomic composition of the pelagic crustacean zooplankton assemblage in Mowich Lake prior to the stocking of kokanee salmon. The Mowich Lake zooplankton assemblages in 1988-1999 were consistent with those in 1966 and 1967. Crustacean taxa were extremely rare, but they included most of the primary taxa collected from 23 MORA lakes surveyed in 1988. Nonetheless, the 1988 collections showed that the September rotifer assemblage in Mowich Lake was similar to 10 of the 24 lakes sampled. Seven of the 10 lakes were dominated by cladocerans, primarily Daphnia rosea and Holopedium gibberum. Therefore, it appeared that either one or both of these species may have numerically dominated the crustacean zooplankton assemblage in the lake prior to 1961.

  15. Persistence of an unusual pelagic zooplankton assemblage in a clear mountain lake

    USGS Publications Warehouse

    Larson, Gary L.; Hoffman, Robert L.; McIntire, C.D.

    2002-01-01

    The planktonic zooplankton assemblage in Mowich Lake, Mount Rainier National Park (MORA), was composed almost entirely of rotifers in 1966 and 1967. Adult pelagic crustacean taxa were rare. Their paucity was attributed to predation by kokanee salmon (Oncorhynchus nerka), which had been stocked in 1961. During a park-wide survey of 24 lakes in 1988, Mowich Lake was the only one that did not contain at least one planktonic crustacean species. Given the apparent persistence of the unusual pelagic zooplankton assemblage in Mowich Lake, the first objective of this study was to document the interannual variation in the taxonomic structure of the zooplankton assemblages in the lake from 1988 through 1999. A second objective was to determine if it was possible to predict the taxonomic composition of the pelagic crustacean zooplankton assemblage in Mowich Lake prior to the stocking of kokanee salmon. The Mowich Lake zooplankton assemblages in 1988a??1999 were consistent with those in 1966 and 1967. Crustacean taxa were extremely rare, but they included most of the primary taxa collected from 23 MORA lakes surveyed in 1988. Nonetheless, the 1988 collections showed that the September rotifer assemblage in Mowich Lake was similar to 10 of the 24 lakes sampled. Seven of the 10 lakes were dominated by cladocerans, primarily Daphnia rosea and Holopedium gibberum. Therefore, it appeared that either one or both of these species may have numerically dominated the crustacean zooplankton assemblage in the lake prior to 1961.

  16. Benthic Macroinvertebrate Assemblages in the Near Coastal Zone of Lake Erie

    EPA Science Inventory

    Benthic macroinvertebrate assemblages have been used as indicators of ecological condition because their responses integrate localized environmental conditions of the sediments and overlying water. Assemblages of benthic invertebrates in the near coastal region are of particular...

  17. Vertical distribution, diversity and assemblages of mesopelagic fishes in the western Mediterranean

    NASA Astrophysics Data System (ADS)

    Olivar, M. P.; Bernal, A.; Molí, B.; Peña, M.; Balbín, R.; Castellón, A.; Miquel, J.; Massutí, E.

    2012-04-01

    The mesopelagic fish community of the western Mediterranean was studied during two cruises carried out in December 2009 and July 2010 in the shelf and slope zones around the Balearic Islands. Much of what was previously known about this deep water group of fishes in the Mediterranean Sea came from studies performed using planktonic and small midwater nets. This study was the first attempt to use large pelagic trawls and small nets combined with information about the main sound scattering layers to analyse mesopelagic fish composition, diversity and species assemblages. This community is characterised by a relatively low diversity compared to other oceanic regions of the world, with Myctophiformes and Stomiiformes being the main contributors. Bathymetry and the level of the water column were the most important factors structuring the investigated fish assemblages, and similar vertical patterns were observed for the different species collected during the two study periods. A shelf assemblage composed of a few species of myctophids, with Notoscopelus elongatus being the main contributor, was distinguished. The slope assemblage included both Myctophiformes and Stomiiformes that showed differences in their day-night main location along the water column. In terms of species behaviour, two important groups were detected. The first was non-migrant or weakly migrant species, with the paradigmatic example being the gonostomatid Cyclothone braueri, which occurred at a depth of 400-600 m; this species is partly responsible for the permanent acoustic (38 kHz) response at this depth. The second group, near-surface migrants at night, was represented by most of the juvenile and adult myctophids, exemplified by Ceratoscopelus maderensis, with the exception of just a few of the largest size classes of some species, such as Lampanyctus crocodilus and N. elongatus that remain near the bottom.

  18. Pattern of distribution and diversity of demersal assemblages in the central Mediterranean Sea

    NASA Astrophysics Data System (ADS)

    Colloca, F.; Cardinale, M.; Belluscio, A.; Ardizzone, G.

    2003-03-01

    A highly diversified mix of fish species, cephalopods and crustaceans, together with several macro-epibenthic organisms, compose trawl catches in the Mediterranean Sea. Management of Mediterranean trawling needs a multispecies approach that considers the community and not the single species as the basic unit of the analysis. While many studies have correlated several environmental factors to the spatial organizations of demersal organisms, few have focused on the role of macro-epibenthic communities in structuring demersal assemblages. In this paper, the following hypotheses were tested: (1) there are discrete demersal assemblages in the central Mediterranean Sea; (2) the distribution and diversity of demersal communities does not change on small temporal scales (1 year); (3) the demersal assemblages were segregated across both different epibenthic assemblages and depth gradients. Shallow stations were separated into coastal and middle-deep shelf assemblages while stations on the slope formed three main assemblages: slope edge, upper slope and middle slope assemblages. The demersal community did not show a substantial change at the small temporal scale. Sandy, sand-muddy and detritic epibenthic communities characterized coastal shelf assemblages, while epibenthic assemblage on muddy bottoms were dominant in the deeper areas of the shelf. A well-defined difference in macro-epibenthic faunal associations among stations on the slope (depth >200 m) was not found. Depth appeared to affect diversity of the main taxa of demersal organisms in different ways. Teleostean diversity did not show any trend with depth, the number of cephalopod species increased on the shelf and decreased on the slope while crustacean and elasmobranch species richness increased significantly from the shelf to the middle slope. The strong correlation shown in this study between epifaunal benthic communities and demersal fish assemblages requires the formulation of an ecosystem-based management for

  19. Influential environmental gradients and spatiotemporal patterns of fish assemblages in the unimpounded Upper Mississippi River

    USGS Publications Warehouse

    Barko, V.A.; Palmer, M.W.; Herzog, D.P.; Ickes, B.S.

    2004-01-01

    We investigated variation of fish assemblages in response to environmental factors using Long Term Resource Monitoring Program data. Data were collected from 1993 to 2000 from five physical habitats in the unimpounded upper Mississippi River. We captured 89 species composing 18 families. Of these, 26% were fluvial specialists, 25% were fluvial dependent and 49% were generalists. The numerically dominant component of the adult fish assemblage (species accounting for >10% of total catch) accounted for 50% of the assemblage and was comprised of only three species: gizzard shad (Dorosoma cepedianum; 25%), common carp (Cyprinus carpio, 15%) and channel catfish (Ictalurus punctatus, 10%). The dominant component of the YOY fish assemblage was comprised of only two species, which accounted for 76% of the total catch: freshwater drum (Aplodinotus grunniens; 39%) and gizzard shad (37%). We used a cross-validation multivariate approach to explore how adult and young-of-the-year (YOY) assemblages varied with respect. to physical habitat and environmental gradients. Furthermore, we were interested how the fish assemblages changed over time. Partial canonical correspondence analyses (pCCA) demonstrated significant effects of physical habitats. Such effects differed between young-of-the-year and adult fishes. The four main environmental gradients influencing overall assemblage structure for both age groups were river elevation, water velocity, conductivity, and depth of gear deployment. Morisita's index revealed similar adult assemblage structure over time. However, the YOY assemblage present in 1995 was dissimilar from assemblages present during the other years. We speculate this is a lag effect from the backwater spawning episodes (floodpulse) that occurred with the 500-y flood in 1993. Shannon-Weiner diversity and Camargo's evenness indices were low, but stable across years for the adult assemblage, but varied across years for the YOY assemblage.

  20. Identifying areas of high economic-potential copper mineralization using ASTER data in the Urumieh-Dokhtar Volcanic Belt, Iran

    NASA Astrophysics Data System (ADS)

    Pour, Amin Beiranvand; Hashim, Mazlan

    2012-02-01

    This study investigates the application of spectral image processing methods to ASTER data for mapping hydrothermal alteration zones associated with porphyry copper mineralization and related host rock. The study area is located in the southeastern segment of the Urumieh-Dokhtar Volcanic Belt of Iran. This area has been selected because it is a potential zone for exploration of new porphyry copper deposits. Spectral transform approaches, namely principal component analysis, band ratio and minimum noise fraction were used for mapping hydrothermally altered rocks and lithological units at regional scale. Spectral mapping methods, including spectral angle mapper, linear spectral unmixing, matched filtering and mixture tuned matched filtering were applied to differentiate hydrothermal alteration zones associated with porphyry copper mineralization such as phyllic, argillic and propylitic mineral assemblages.Spectral transform methods enhanced hydrothermally altered rocks associated with the known porphyry copper deposits and new identified prospects using shortwave infrared (SWIR) bands of ASTER. These methods showed the discrimination of quartz rich igneous rocks from the magmatic background and the boundary between igneous and sedimentary rocks using the thermal infrared (TIR) bands of ASTER at regional scale. Spectral mapping methods distinguished the sericitically- and argillically-altered rocks (the phyllic and argillic alteration zones) that surrounded by discontinuous to extensive zones of propylitized rocks (the propylitic alteration zone) using SWIR bands of ASTER at both regional and district scales. Linear spectral unmixing method can be best suited for distinguishing specific high economic-potential hydrothermal alteration zone (the phyllic zone) and mineral assemblages using SWIR bands of ASTER. Results have proven to be effective, and in accordance with the results of field surveying, spectral reflectance measurements and X-ray diffraction (XRD) analysis

  1. Rare species contribute disproportionately to the functional structure of species assemblages

    PubMed Central

    Zuanon, Jansen; Williams, Stephen E.; Baraloto, Christopher; Mendonça, Fernando P.

    2016-01-01

    There is broad consensus that the diversity of functional traits within species assemblages drives several ecological processes. It is also widely recognized that rare species are the first to become extinct following human-induced disturbances. Surprisingly, however, the functional importance of rare species is still poorly understood, particularly in tropical species-rich assemblages where the majority of species are rare, and the rate of species extinction can be high. Here, we investigated the consequences of local and regional extinctions on the functional structure of species assemblages. We used three extensive datasets (stream fish from the Brazilian Amazon, rainforest trees from French Guiana, and birds from the Australian Wet Tropics) and built an integrative measure of species rarity versus commonness, combining local abundance, geographical range, and habitat breadth. Using different scenarios of species loss, we found a disproportionate impact of rare species extinction for the three groups, with significant reductions in levels of functional richness, specialization, and originality of assemblages, which may severely undermine the integrity of ecological processes. The whole breadth of functional abilities within species assemblages, which is disproportionately supported by rare species, is certainly critical in maintaining ecosystems particularly under the ongoing rapid environmental transitions. PMID:27053754

  2. Diversity and composition of estuarine and lagoonal fish assemblages of Socotra Island, Yemen.

    PubMed

    Lavergne, E; Zajonz, U; Krupp, F; Naseeb, F; Aideed, M S

    2016-05-01

    Estuarine and lagoonal surveys of Socotra Island and selected sites on the Hadhramout coast of Yemen were conducted with the objective of documenting and analysing fish diversity and assemblage structure. A total of 74 species in 35 families were recorded, among which 65 species in 32 families were from Socotra and 20 species in 17 families were from mainland Yemen. Twenty-one species represent new faunal records for Socotra. Including historic records re-examined in this study, the total fish species richness of estuaries and lagoons of Socotra Island reaches 76, which is relatively high compared to species inventories of well-researched coastal estuaries in southern Africa. Five species dominate the occurrence and abundance frequencies: Terapon jarbua, Hyporhamphus sindensis, Aphanius dispar, Ambassis gymnocephala and Chelon macrolepis. Rarefaction and extrapolation analyses suggest that the actual number of fish species inhabiting some of those estuaries might be higher than the one observed. Thus, additional sampling at specific sites should be conducted to record other less conspicuous species. Ordination and multivariate analyses identified four main distinct assemblage clusters. Two groups are geographically well structured and represent northern Socotra and mainland Yemen, respectively. The other two assemblage groups tend to be determined to a greater extent by the synchrony between physical (e.g. estuary opening periods) and biological (e.g. spawning and recruitment periods) variables than by geographical location. Finally, the single intertidal lagoon of Socotra represents by itself a specific fish assemblage. The high proportion of economically important fish species (38) recorded underscores the paramount importance of these coastal water bodies as nursery sites, and for sustaining vital provisioning ecosystem services. © 2016 The Fisheries Society of the British Isles.

  3. Mineral textures in Serpentine-hosted Alkaline Springs from the Oman ophiolite

    NASA Astrophysics Data System (ADS)

    Giampouras, Manolis; Garcia-Ruiz, Juan Manuel; Bach, Wolfgang; Garrido, Carlos J.; Los, Karin; Fussmann, Dario; Monien, Monien

    2017-04-01

    is spatially controlled by the hydrology of the system and is localized around mixing zones between Ca-type with Mg-type waters. Residence time of discharging waters in the ponds before mixing has an impact on fluid chemistry as it influences the equilibration time with the atmosphere. Acicular aragonite is the main textural type in hyper-alkaline Ca-type waters, acting as a substratum for the growth of calcite and brucite crystals. Low crystallinity, dumbbell shaped and double pyramid aragonite dominates in Mix-type water precipitates. Rate of supersaturation is essential for precipitation intensity and textural variation among the mineral assemblages in the different water types. Low S/ S˚ ratios in Mg-type and Ca-type waters (<1) reveal limited precipitation. Chemical reactions that lead to rapid mineral formation are enhanced in cases of Mix-type waters characterized by higher S/ S˚ ratios (>1.2). Detailed investigation of individual spring sites allowed the determination of geochemical and hydrological factors controlling the phases and textures of mineralogical assemblages in active, serpentinization-related, alkaline environments. Funding: We acknowledge funding from the People programme (Marie Curie Actions - ITN) of the European Union FP7 under REA Grant Agreement n˚ 608001.

  4. Abundance and composition of juvenile corals reveals divergent trajectories for coral assemblages across the United Arab Emirates.

    PubMed

    Pratchett, Morgan S; Baird, Andrew H; Bauman, Andrew G; Burt, John A

    2017-01-30

    Marked shifts in the composition of coral assemblages are occurring at many locations, but it is unknown whether these are permanent shifts reinforced by patterns of population replenishment. This study examined the composition of juvenile coral assemblages across the United Arab Emirates (UAE). Densities of juvenile corals varied significantly among locations, but were highest where coral cover was highest. Juvenile coral assemblages within the Persian Gulf were dominated by Porites, while no Acropora were recorded. We expect therefore, continued declines in Acropora abundance, while observed dominance of Porites is likely to persist. In the Oman Sea, Pocillopora was the dominant juvenile coral, with Acropora and Stylophora also recorded. This study shows that taxonomic differences in replenishment are reinforcing temporal shifts in coral composition within the southern Persian Gulf, but not in the Oman Sea. Differences in environmental conditions and disturbance regimes likely explain the divergent responses between regions. Copyright © 2016 Elsevier Ltd. All rights reserved.

  5. Microhabitat influence on larval fish assemblages within ...

    EPA Pesticide Factsheets

    We examined larval and juvenile fish assemblage structure in relation to microhabitat variables within the St. Louis River estuary, a drowned river mouth of Lake Superior. Fish were sampled in vegetated beds throughout the estuary, across a gradient of vegetation types and densities (including disturbed, preserved and post-restoration sites). Canonical correspondence analysis, relating species abundances to environmental variables revealed that plant species richness, turbidity and aquatic plant cover were most influential in structuring assemblages. Results from this microhabitat analysis at this crucial life stage has potential to inform wetland restoration efforts within the St. Louis River and other Great Lake coastal wetlands. not applicable

  6. Anthropogenic disturbance and environmental associations with fish assemblage structure in two nonwadeable rivers

    USGS Publications Warehouse

    Parks, T. P.; Quist, Michael C.; Pierce, C.L.

    2016-01-01

    Nonwadeable rivers are unique ecosystems that support high levels of aquatic biodiversity, yet they have been greatly altered by human activities. Although riverine fish assemblages have been studied in the past, we still have an incomplete understanding of how fish assemblages respond to both natural and anthropogenic influences in large rivers. The purpose of this study was to evaluate associations between fish assemblage structure and reach-scale habitat, dam, and watershed land use characteristics. In the summers of 2011 and 2012, comprehensive fish and environmental data were collected from 33 reaches in the Iowa and Cedar rivers of eastern-central Iowa. Canonical correspondence analysis (CCA) was used to evaluate environmental relationships with species relative abundance, functional trait abundance (e.g. catch rate of tolerant species), and functional trait composition (e.g. percentage of tolerant species). On the basis of partial CCAs, reach-scale habitat, dam characteristics, and watershed land use features explained 25.0–81.1%, 6.2–25.1%, and 5.8–47.2% of fish assemblage variation, respectively. Although reach-scale, dam, and land use factors contributed to overall assemblage structure, the majority of fish assemblage variation was constrained by reach-scale habitat factors. Specifically, mean annual discharge was consistently selected in nine of the 11 CCA models and accounted for the majority of explained fish assemblage variance by reach-scale habitat. This study provides important insight on the influence of anthropogenic disturbances across multiple spatial scales on fish assemblages in large river systems.

  7. Groundwater declines are linked to changes in Great Plains stream fish assemblages

    USGS Publications Warehouse

    Prekins, Joshuah S.; Gido, Keith B.; Falke, Jeffrey A.; Fausch, Kurt D.; Crockett, Harry; Johnson, Eric R.; Sanderson, John

    2017-01-01

    Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950–2010) and prospective (2011–2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater pumping from the United States High Plains Aquifer. We modeled the relationship between the length of stream receiving water from the High Plains Aquifer and the occurrence of fishes characteristic of small and large streams in the western Great Plains at a regional scale and for six subwatersheds nested within the region. Water development at the regional scale was associated with construction of 154 barriers that fragment stream habitats, increased depth to groundwater and loss of 558 km of stream, and transformation of fish assemblage structure from dominance by large-stream to small-stream fishes. Scaling down to subwatersheds revealed consistent transformations in fish assemblage structure among western subwatersheds with increasing depths to groundwater. Although transformations occurred in the absence of barriers, barriers along mainstem rivers isolate depauperate western fish assemblages from relatively intact eastern fish assemblages. Projections to 2060 indicate loss of an additional 286 km of stream across the region, as well as continued replacement of large-stream fishes by small-stream fishes where groundwater pumping has increased depth to groundwater. Our work illustrates the shrinking of streams and homogenization of Great Plains stream fish assemblages related to groundwater pumping, and we predict similar transformations worldwide where local and regional aquifer depletions occur.

  8. Groundwater declines are linked to changes in Great Plains stream fish assemblages.

    PubMed

    Perkin, Joshuah S; Gido, Keith B; Falke, Jeffrey A; Fausch, Kurt D; Crockett, Harry; Johnson, Eric R; Sanderson, John

    2017-07-11

    Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950-2010) and prospective (2011-2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater pumping from the United States High Plains Aquifer. We modeled the relationship between the length of stream receiving water from the High Plains Aquifer and the occurrence of fishes characteristic of small and large streams in the western Great Plains at a regional scale and for six subwatersheds nested within the region. Water development at the regional scale was associated with construction of 154 barriers that fragment stream habitats, increased depth to groundwater and loss of 558 km of stream, and transformation of fish assemblage structure from dominance by large-stream to small-stream fishes. Scaling down to subwatersheds revealed consistent transformations in fish assemblage structure among western subwatersheds with increasing depths to groundwater. Although transformations occurred in the absence of barriers, barriers along mainstem rivers isolate depauperate western fish assemblages from relatively intact eastern fish assemblages. Projections to 2060 indicate loss of an additional 286 km of stream across the region, as well as continued replacement of large-stream fishes by small-stream fishes where groundwater pumping has increased depth to groundwater. Our work illustrates the shrinking of streams and homogenization of Great Plains stream fish assemblages related to groundwater pumping, and we predict similar transformations worldwide where local and regional aquifer depletions occur.

  9. Groundwater declines are linked to changes in Great Plains stream fish assemblages

    PubMed Central

    Perkin, Joshuah S.; Gido, Keith B.; Falke, Jeffrey A.; Fausch, Kurt D.; Crockett, Harry; Johnson, Eric R.; Sanderson, John

    2017-01-01

    Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950–2010) and prospective (2011–2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater pumping from the United States High Plains Aquifer. We modeled the relationship between the length of stream receiving water from the High Plains Aquifer and the occurrence of fishes characteristic of small and large streams in the western Great Plains at a regional scale and for six subwatersheds nested within the region. Water development at the regional scale was associated with construction of 154 barriers that fragment stream habitats, increased depth to groundwater and loss of 558 km of stream, and transformation of fish assemblage structure from dominance by large-stream to small-stream fishes. Scaling down to subwatersheds revealed consistent transformations in fish assemblage structure among western subwatersheds with increasing depths to groundwater. Although transformations occurred in the absence of barriers, barriers along mainstem rivers isolate depauperate western fish assemblages from relatively intact eastern fish assemblages. Projections to 2060 indicate loss of an additional 286 km of stream across the region, as well as continued replacement of large-stream fishes by small-stream fishes where groundwater pumping has increased depth to groundwater. Our work illustrates the shrinking of streams and homogenization of Great Plains stream fish assemblages related to groundwater pumping, and we predict similar transformations worldwide where local and regional aquifer depletions occur. PMID:28652354

  10. The role of connectivity and hydrodynamic conditions in the configuration of ichthyoplankton assemblages in coastal lagoons

    NASA Astrophysics Data System (ADS)

    Pérez-Ruzafa, Angel; Quispe, Jhoni I.; Umgiesser, Georg; Ghezzo, Michol; De Pascalis, Francesca; Marcos, Concepción

    2014-05-01

    Fish assemblages in coastal lagoons are constituted by species with different gilds and life stories including estuarine residents but also a high percentage of marine stragglers and marine migrants. Previous studies showed that different ichthyoplancton assemblages can be identified inside a lagoon, depending on hydrological conditions, but at the same time a high spatial and temporal variability haven observed. The proposed models to explain lagoon assemblages configuration based on probabilities of colonization from the open sea involves an important stochastic component and introduces some randomness that could lead to that high spatial and temporal variability at short and long-term scales. In this work we analyze the relationship between ichthyoplankton assemblages in the Mar Menor lagoon and the adjacent open sea in the framework of the hydrodynamics of the lagoon and connectivity between sampling stations using hydrodynamic models. The results, show a complex interaction between the different factors that lead to a highly variable system with high accumulated richness and diversity of species, and a large proportion of occasional visitors and stragglers suggesting that the mechanisms of competitive lottery can play an important role in the maintenance of communities of coastal lagoons , where environmental variability occurs in a system with strong differences in colonization rates and connectivity, not only with the open sea, but also between locations within the lagoon.

  11. Intra-reach headwater fish assemblage structure

    USGS Publications Warehouse

    McKenna, James E.

    2017-01-01

    Large-scale conservation efforts can take advantage of modern large databases and regional modeling and assessment methods. However, these broad-scale efforts often assume uniform average habitat conditions and/or species assemblages within stream reaches.

  12. Implications of modelled radioactivity measurements along coastal Odisha, Eastern India for heavy mineral resources

    NASA Astrophysics Data System (ADS)

    Ghosal, S.; Agrahari, S.; Guin, R.; Sengupta, D.

    2017-01-01

    A radioelemental assemblage assessment of two beaches of Odisha is performed for the first time. The radiation is measured in two ways, both on field with the help of a hand held environmental survey meter and in the laboratory, where the concentrations of radionuclide's 238U, 232Th and 4K have been determined with the help of High Purity Germanium detector (HPGe). Mineralogical analysis of selected samples has been performed with the help of X-Ray Fluorescence Spectrometry (XRF). A marked difference between the concentration of Uranium (274 Bq kg-1) and Thorium (2489 Bq kg-1) is observed and discussed based on the geology of the area. The placer deposits showing an enrichment of thorium can be an important source of nuclear fuel for the thorium based nuclear reactors. The ratio of thorium and uranium concentrations gives us an idea about the coastal processes associated with the beach. Statistical analysis of the data shows a positive correlation between 238U and 232Th and a strong negative correlation is indicated between 4 K and 238U, 232Th. A cross plot between the equivalent thorium and the equivalent uranium and the equivalent thorium and potassium, represents the nature of deposition and its association with the heavy mineral along with the radioactive elements. Heavy minerals exhibit an increasing trend towards Northeast-Southwest along the south eastern coast of India.

  13. Comparison of species composition and richness of fish assemblages in altered and unaltered littoral habitats

    USGS Publications Warehouse

    Poe, T.P.; Hatcher, C.O.; Brown, C.L.; Schloesser, D.W.

    1986-01-01

    Species composition and richness of fish assemblages in altered and unaltered littoral habitats in Lake St. Clair, Michigan, differed between areas. A percid-cyprinid-cyprinodontid assemblage dominated in the unaltered area, Muscamoot Bay, which has a natural shoreline (with almost no alteration due to dredging or bulkheading), high water quality, and high species richness of aquatic macrophytes. A centrarchid assemblage dominated in the altered area, Belvidere Bay, which has a bulkheaded shoreline, many dredged areas, reduced water quality due to inputs of nutrients from a nearby river, and relatively low species richness of aquatic macrophytes. Habitat factors, species richness and abundance of aquatic macrophytes, had the most influence on fish community structure in both areas. The percid-cyprinid-cyprinodontid assemblage was significantly correlated with six species of macrophytes whereas the centrarchid assemblage was significantly correlated with only four. These patterns suggest that preference for diverse habitats was higher, and tolerance to habitat alteration lower, in percid-cyprinid-cyprinodontid assemblages than in centrarchid assemblages.

  14. Observation of Asian Mineral Dust Particles in Japan by a Single-Particle Mass Spectrometer

    NASA Astrophysics Data System (ADS)

    Matsumoto, J.; Takahashi, K.; Matsumi, Y.; Sugimoto, N.; Matsui, I.; Shimizu, A.

    2005-12-01

    The Asian mineral dust (Kosa) particles, emitted from the desert area of inland China, are characteristic of East Asian aerosols. The Kosa particles are important as regional carriers of various materials, especially in spring when the stormy dusts are transported to Japan and Pacific Ocean. In this study, the chemical mixing state of each atmospheric aerosol was measured individually by a laser-based time-of-flight mass spectrometer (TOFMS) to discuss chemical changes of Kosa particles during the transport. Observation was conducted at Tsukuba (36.05°N, 140.12°E) in April and May 2004. The LIDAR measurement was also carried out to determine the Kosa events. To classify the source of the air mass, the NOAA-HYSPLIT backward trajectory was applied. For the TOFMS instrument, particles with μm and sub-μm diameters were detected. The polarity of ion detection was altered every minute. During 30 days, the numbers of logged mass spectra (MS) were 5993 and 4382 for positive and negative ions, respectively. When the MS of ambient aerosols were compared with that of the standard Kosa sample, sulfate- and nitrate-mixed Kosa particles were found. To explore the mixing state of particles further, classification of the particles by the ART-2a algorithm was adopted. NO2-, NO3-, HSO4-, SiO2-, SiO3-, Cl- and NaCl2- were focused. Finally, particles were classified to 4 categories as A: sulfate and sulfate-rich mineral; B: sulfate-poor mineral; C: sea salt; D: unidentified. The relative fractions of A were 30 % and 1 % for a Kosa event and a maritime air mass, respectively. Note that the air mass for Kosa event case passed over the coast region of China, where SOx emission was intensive. It was reasonable that sulfate was internally mixed with Kosa particles and transported to Japan. Consequently, it was confirmed experimentally that Kosa particles are important as carriers of pollutants in the rim region of Pacific Ocean. Comparison with the observation in 2005 is also shown.

  15. Role of riparian shade on the fish assemblage of a reservoir littoral

    USGS Publications Warehouse

    Raines, C. D.; Miranda, Leandro E.

    2016-01-01

    Research into the effects of shade on reservoir fish assemblages is lacking, with most investigations focused on streams. Unlike many streams, the canopy in a reservoir shades only a narrow fringe of water adjacent to the shoreline, and may not have the influential effect on the aquatic environment reported in streams. We compared fish assemblages between shaded and unshaded sites in a shallow reservoir. Overall species richness (gamma diversity) was higher in shaded sites, and fish assemblage composition differed between shaded and unshaded sites. Average light intensity was 66 % lower in shaded sites, and differences in average temperature and dissolved oxygen were small. Unlike streams where shade can have large effects on water physicochemistry, in reservoirs shade-related differences in fish assemblages seemed to be linked principally to differences in light intensity. Diversity in light intensity in shaded and unshaded sites in reservoirs can create various mosaics of light-based habitats that enable diversity of species assemblages. Managing to promote the habitat diversity provided by shade may require coping with the artificial nature of reservoir riparian zones and water level fluctuations.

  16. Benthic foraminiferal assemblages in Osaka Bay, southwestern Japan: Faunal changes over the last 50 years

    USGS Publications Warehouse

    Tsujimoto, Akira; Nomura, Ritsuo; Yasuhara, Moriaki; Yoshikawa, Shusaku

    2006-01-01

    Live benthic foraminiferal assemblages from surface sediment in Osaka Bay collected in 1999 were analyzed to characterize the distribution of the modern foraminiferal assemblages. Foraminiferal assemblages were compared with those of previous studies to document environmental changes in Osaka Bay over the past 50 years. Sixty-one species of foraminifera belonging to 37 genera were recognized from the 1999 surface sediment samples. An agglutinated assemblage containing Trochammina hadai and Eggerella advena is dominant in the inner part of the bay and is related to eutrophication. The foraminiferal assemblage in areas deeper than about 20 m is composed of Eggerella advena, Ammonia beccarii forma A, and Pseudorotalia gaimardii. This assemblage may be influenced by the large clockwise Okinose Circulation Current which extends throughout the western bay. Foraminiferal assemblages in Osaka Bay have changed dramatically during the last 50 years. The Trochammina hadai-Eggerella advena assemblage became established in the inner part of the bay, reflecting eutrophication that progressed from the 1960s through the 1970s. This assemblage became dominant in 1983, and typically dominated the inner part of the bay. From 1983 to 1999, however, the abundance of taxa belonging to this assemblage decreased greatly following implementation of 1973 Osaka City bylaws that restricted wastewater discharge. Changes in benthic assemblages such as the decrease of Ammonia beccarii forma A and increase of Eggerella advena have occurred in response to decreased incidence of red tides, and floral change in the species that cause these tides. The results of this study demonstrate that the abundance and distribution of benthic foraminifers in Osaka Bay are intimately related to environmental changes related to the urbanization of coastal areas. ?? by the Palaeontological Society of Japan.

  17. Public sphere as assemblage: the cultural politics of roadside memorialization.

    PubMed

    Campbell, Elaine

    2013-09-01

    This paper investigates contemporary academic accounts of the public sphere. In particular, it takes stock of post-Habermasian public sphere scholarship, and acknowledges a lively and variegated debate concerning the multiple ways in which individuals engage in contemporary political affairs. A critical eye is cast over a range of key insights which have come to establish the parameters of what 'counts' as a/the public sphere, who can be involved, and where and how communicative networks are established. This opens up the conceptual space for re-imagining a/the public sphere as an assemblage. Making use of recent developments in Deleuzian-inspired assemblage theory - most especially drawn from DeLanda's (2006) 'new philosophy of society' - the paper sets out an alternative perspective on the notion of the public sphere, and regards it as a space of connectivity brought into being through a contingent and heterogeneous assemblage of discursive, visual and performative practices. This is mapped out with reference to the cultural politics of roadside memorialization. However, a/the public sphere as an assemblage is not simply a 'social construction' brought into being through a logic of connectivity, but is an emergent and ephemeral space which reflexively nurtures and assembles the cultural politics (and political cultures) of which it is an integral part. The discussion concludes, then, with a consideration of the contribution of assemblage theory to public sphere studies. (Also see Campbell 2009a). © London School of Economics and Political Science 2013.

  18. Elevated land runoff after European settlement perturbs persistent foraminiferal assemblages on the Great Barrier Reef.

    PubMed

    Uthicke, S; Patel, F; Ditchburn, R

    2012-01-01

    Coral reefs are under pressure from a variety of human-induced disturbances, but demonstration of ecosystem changes and identification of stressors are often difficult. We tested whether global change or increased agricultural runoff after European settlement of Northeast Australia (ca. 1860) has affected inshore reefs of the Great Barrier Reef. Eleven sediment cores were retrieved from inner reefs, intermediate reefs, and outer-island reefs, and benthic foraminiferal assemblages were analyzed in dated (14C, 210Pb, 137Cs) core sections (N = 82 samples). Data were grouped into six age bands (< 55, 55-150, 150-500, 500-1000, 1000-1500, and > 1500 yr). Principal component analysis and two-factor (Zone and Age) permutational analysis of variance (PERMANOVA) suggested that assemblages from the three zones were significantly different from each other over several millennia, with symbiont-bearing (mixotrophic) species dominating the outer reefs. A significant interaction term indicated that within-zone patterns varied. Assemblages in outer reefs unaffected from increased land runoff were persistent until present times. In both other zones, assemblages were also persistent until 150 yr ago, suggesting that benthic foraminiferal assemblages are naturally highly persistent over long (> 2000 yr) timescales. Assemblages in core sections < 55 yr old from inner reefs were significantly (post hoc t test) different from those older than 150 yr. Similarly, assemblages < 55 yr old from intermediate reefs were significantly different compared to older assemblages. A multivariate regression tree (environmental variables: Zone and Age) explained 56.8% of the variance in foraminiferal assemblages and confirmed patterns identified by PERMANOVA. With some exceptions, changes on the inner and intermediate reefs were consistent with a model predicting that increased nutrients and higher turbidity enhance relative abundance of heterotrophic species. Given that assemblages did not change in

  19. Giardia Assemblages A and B in Diarrheic Patients: A Comparative Study in Egyptian Children and Adults.

    PubMed

    El Basha, Noussa R; Zaki, Mayssa M; Hassanin, Omayma M; Rehan, Mohamed K; Omran, Dalia

    2016-02-01

    Giardia duodenalis is considered the most common intestinal parasite in humans worldwide. Children are especially affected, with more severe consequences than adults. The present study was designed to determine the distribution of assemblages A and B Giardia infection in children and adults, with the use of light microscopy and polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) as diagnostic procedures, and to investigate its associations with clinical and epidemiological data collected from children and adult groups. This cross-sectional study was conducted from October 2012 to October 2013 by collecting fecal samples from 200 children and 200 adults complaining of diarrhea. Samples were subjected to parasitological examination by direct wet smear and formol-ether methods. Genotyping of G. doudenalis samples was conducted by PCR-RFLP analysis. Giardia duodenalis infection caused by assemblages A and B was identified in 60 samples, 34 from children and 26 from adults. Assemblage B was detected in 38 patients (63.34%), and assemblage A was detected in 22 patients (36.66%). Assemblage A was significantly more frequent in children with age range 2-8 yr, and assemblage B was higher in children with age range 6-16 yr old. Diarrhea frequency/day and recurrences per month affected patients infected with assemblage A (P value < 0.001) more frequently. Children infected with assemblage A presented significantly more severe diarrhea and dehydration than those infected with assemblage B (P value < 0.001). Although both Giardia assemblages A and B were identified in children and adults, assemblage A infected younger children more frequently and was more closely related to severe clinical manifestations than assemblage B.

  20. Emergence patterns of novel vegetation assemblages over the past 15,000 years in Europe

    NASA Astrophysics Data System (ADS)

    Finsinger, Walter; Brewer, Simon; Giesecke, Thomas; Leydet, Michelle

    2016-04-01

    Plant communities are not stable over time and the development of so-called novel ecosystems, i.e. ecosystems that differ in composition from present and historical ecosystems, is inevitable. Ecological novelty may arise due to rapid climate changes, the introduction of exotic species, and human land-use changes. However, little is known as to when and at what velocity novel ecosystems emerged in the past. Here we use pollen sequences from the European Pollen Database (EPD) to explore the spatial and temporal patterns of emergence of novel plant communities over the past ca. 15,000 years. The rationale behind this analysis is that just as modern communities are expected to differ fundamentally to those occurring in the future, this difference also occurred between past communities and their contingent future composition. Our aims are to explore the rate at which these past novel communities arose, and how these rates varied over time. Further, as land-cover composition has been significantly altered in comparison to the past, we explore the extent to which human-caused landscape changes accelerated the emergence of novel vegetation assemblages. For each pollen record we collated pollen counts into 30 consecutive 500-year wide age bins centred on full 500-year intervals between 0 and 15,000 cal BP. We iteratively considered each age bin as describing a baseline condition in the past and searched for each assemblage in the baseline age bins the closest analogues among all assemblages in each future age bin (hereafter 'target age bin'). To identify assemblages lacking a close analogue in target age bins we determined for each reference age bin a critical dissimilarity score as the low quantile of the pair-wise dissimilarities observed. The rate of emergence of novel communities was estimated as the percentage of assemblages lacking a close analogue in target age bins per 500 years. Rates of emergence of novel assemblages varied through time and highest rates occurred

  1. Macroalgal Composition Determines the Structure of Benthic Assemblages Colonizing Fragmented Habitats.

    PubMed

    Matias, Miguel G; Arenas, Francisco; Rubal, Marcos; Pinto, Isabel S

    2015-01-01

    Understanding the consequences of fragmentation of coastal habitats is an important topic of discussion in marine ecology. Research on the effects of fragmentation has revealed complex and context-dependent biotic responses, which prevent generalizations across different habitats or study organisms. The effects of fragmentation in marine environments have been rarely investigated across heterogeneous habitats, since most studies have focused on a single type of habitat or patch. In this study, we assessed the effects of different levels of fragmentation (i.e. decreasing size of patches without overall habitat loss). We measured these effects using assemblages of macro-invertebrates colonizing representative morphological groups of intertidal macroalgae (e.g. encrusting, turf and canopy-forming algae). For this purpose, we constructed artificial assemblages with different combinations of morphological groups and increasing levels of fragmentation by manipulating the amount of bare rock or the spatial arrangement of different species in mixed assemblages. In general, our results showed that 1) fragmentation did not significantly affect the assemblages of macroinvertebrates; 2) at greater levels of fragmentation, there were greater numbers of species in mixed algal assemblages, suggesting that higher habitat complexity promotes species colonization. Our results suggest that predicting the consequences of fragmentation in heterogeneous habitats is dependent on the type and diversity of morphological groups making up those habitats.

  2. Rare species contribute disproportionately to the functional structure of species assemblages.

    PubMed

    Leitão, Rafael P; Zuanon, Jansen; Villéger, Sébastien; Williams, Stephen E; Baraloto, Christopher; Fortunel, Claire; Mendonça, Fernando P; Mouillot, David

    2016-04-13

    There is broad consensus that the diversity of functional traits within species assemblages drives several ecological processes. It is also widely recognized that rare species are the first to become extinct following human-induced disturbances. Surprisingly, however, the functional importance of rare species is still poorly understood, particularly in tropical species-rich assemblages where the majority of species are rare, and the rate of species extinction can be high. Here, we investigated the consequences of local and regional extinctions on the functional structure of species assemblages. We used three extensive datasets (stream fish from the Brazilian Amazon, rainforest trees from French Guiana, and birds from the Australian Wet Tropics) and built an integrative measure of species rarity versus commonness, combining local abundance, geographical range, and habitat breadth. Using different scenarios of species loss, we found a disproportionate impact of rare species extinction for the three groups, with significant reductions in levels of functional richness, specialization, and originality of assemblages, which may severely undermine the integrity of ecological processes. The whole breadth of functional abilities within species assemblages, which is disproportionately supported by rare species, is certainly critical in maintaining ecosystems particularly under the ongoing rapid environmental transitions. © 2016 The Author(s).

  3. Combining mineral physics with seismic observations: What can we deduce about the thermochemical structure of the Earth's deep interior?

    NASA Astrophysics Data System (ADS)

    Cobden, L. J.

    2017-12-01

    Mineral physics provides the essential link between seismic observations of the Earth's interior, and laboratory (or computer-simulated) measurements of rock properties. In this presentation I will outline the procedure for quantitative conversion from thermochemical structure to seismic structure (and vice versa) using the latest datasets from seismology and mineralogy. I will show examples of how this method can allow us to infer major chemical and dynamic properties of the deep mantle. I will also indicate where uncertainties and limitations in the data require us to exercise caution, in order not to "over-interpret" seismic observations. Understanding and modelling these uncertainties serves as a useful guide for mineralogists to ascertain which mineral parameters are most useful in seismic interpretation, and enables seismologists to optimise their data assembly and inversions for quantitative interpretations.

  4. Problem of the thermodynamic status of the mixed-layer minerals

    USGS Publications Warehouse

    Zen, E.-A.

    1962-01-01

    Minerals that show mixed layering, particularly with the component layers in random sequence, pose problems because they may behave thermodynamically as single phases or as polyphase aggregates. Two operational criteria are proposed for their distinction. The first scheme requires two samples of mixed-layer material which differ only in the proportions of the layers. If each of these two samples are allowed to equilibrate with the same suitably chosen monitoring solution, then the intensive parameters of the solution will be invariant if the mixed-layer sample is a polyphase aggregate, but not otherwise. The second scheme makes use of the fact that portions of many titration curves of clay minerals show constancy of the chemical activities of the components in the equilibrating solutions, suggesting phase separation. If such phase separation occurs for a mixed-layer material, then, knowing the number of independent components in the system, it should be possible to decide on the number of phases the mixed-layer material represents. Knowledge of the phase status of mixed-layer material is essential to the study of the equilibrium relations of mineral assemblages involving such material, because a given mixed-layer mineral will be plotted and treated differently on a phase diagram, depending on whether it is a single phase or a polyphase aggregate. Extension of the titration technique to minerals other than the mixed-layer type is possible. In particular, this method may be used to determine if cryptoperthites and peristerites are polyphase aggregates. In general, for any high-order phase separation, the method may be used to decide just at what point in this continuous process the system must be regarded operationally as a polyphase aggregate. ?? 1962.

  5. The graphite deposit at Borrowdale (UK): A catastrophic mineralizing event associated with Ordovician magmatism

    NASA Astrophysics Data System (ADS)

    Ortega, L.; Millward, D.; Luque, F. J.; Barrenechea, J. F.; Beyssac, O.; Huizenga, J.-M.; Rodas, M.; Clarke, S. M.

    2010-04-01

    The volcanic-hosted graphite deposit at Borrowdale in Cumbria, UK, was formed through precipitation from C-O-H fluids. The δ 13C data indicate that carbon was incorporated into the mineralizing fluids by assimilation of carbonaceous metapelites of the Skiddaw Group by andesite magmas of the Borrowdale Volcanic Group. The graphite mineralization occurred as the fluids migrated upwards through normal conjugate fractures forming the main subvertical pipe-like bodies. The mineralizing fluids evolved from CO 2-CH 4-H 2O mixtures (XCO 2 = 0.6-0.8) to CH 4-H 2O mixtures. Coevally with graphite deposition, the andesite and dioritic wall rocks adjacent to the veins were intensely hydrothermally altered to a propylitic assemblage. The initial graphite precipitation was probably triggered by the earliest hydration reactions in the volcanic host rocks. During the main mineralization stage, graphite precipitated along the pipe-like bodies due to CO 2 → C + O 2. This agrees with the isotopic data which indicate that the first graphite morphologies crystallizing from the fluid (cryptocrystalline aggregates) are isotopically lighter than those crystallizing later (flakes). Late chlorite-graphite veins were formed from CH 4-enriched fluids following the reaction CH 4 + O 2 → C + 2H 2O, producing the successive precipitation of isotopically lighter graphite morphologies. Thus, as mineralization proceeded, water-generating reactions were involved in graphite precipitation, further favouring the propylitic alteration. The structural features of the pipe-like mineralized bodies as well as the isotopic homogeneity of graphite suggest that the mineralization occurred in a very short period of time.

  6. Termites as bioindicators of habitat quality in the caatinga, Brazil: is there agreement between structural habitat variables and the sampled assemblages?

    PubMed

    Alves, W de F; Mota, A S; Lima, R A A de; Bellezoni, R; Vasconcellos, A

    2011-01-01

    The composition of termite assemblages was analyzed in three caatinga sites of the Estação Ecológica do Seridó, located in the municipality of Serra Negra do Norte, in the state of Rio Grande do Norte, Brazil. These sites have been subjected to selective logging, and cleared for pasture and farming. A standardized sampling protocol for termite assemblages (30h/person/site) was conducted between September 2007 and February 2009. At each site we measured environmental variables, such as soil pH and organic matter, necromass stock, vegetation height, stem diameter at ankle height (DAH) and the largest and the smallest crown width. Ten species of termites, belonging to eight genera and three families, were found at the three experimental sites. Four feeding groups were sampled: wood-feeders, soil-feeders, wood-soil interface feeders and leaf-feeders. The wood-feeders were dominant in number of species and number of encounters at all sites. In general, the sites were not significantly different in relation to the environmental variables measured. The same pattern was observed for termite assemblages, where no significant differences in species richness, relative abundance and taxonomic and functional composition were observed between the three sites. The agreement between composition of assemblages and environmental variables reinforces the potential of termites as biological indicators of habitat quality.

  7. Boreal Tintinnid Assemblage in the Northwest Pacific and Its Connection with the Japan Sea in Summer 2014.

    PubMed

    Li, Haibo; Xu, Zhiqiang; Zhang, Wuchang; Wang, Shaoqing; Zhang, Guangtao; Xiao, Tian

    2016-01-01

    Tintinnids are planktonic ciliates that play an important role in marine ecosystem. According to their distribution in the world oceans, tintinnid genera were divided into several biogeographical types such as boreal, warm water, austral and neritic. Therefore, the oceanic tintinnid assemblage could be correspondingly divided into boreal assemblage, warm water assemblage and austral assemblage. The purpose of this study was to investigate the characteristics of boreal tintinnid assemblage in the Northwest Pacific and the Arctic, and to identify the connection between boreal tintinnid assemblage and neighboring assemblages. Surface water samples were collected along a transect from the East China Sea to the Chukchi Sea in summer 2014. According to the presence of boreal genera and warm water genera, three tintinnid assemblages (the East China Sea neritic assemblage, the Japan Sea warm water assemblage, and the boreal assemblage) were identified along the transect. The boreal assemblage extended from the Chukchi Sea to the waters north of the Sōya Strait. Densities peaks occurred at stations in the two branches of the Alaska Current and decreased both northward and southward. The densities were <10 ind./dm3 at most stations in Arctic region. The dominant genera (Acanthostomella, Codonellopsis, Parafavella, and Ptychocylis) accounted for 79.07±29.67% (n = 49) of the abundance in the boreal assemblage. The densities of the dominant genera covaried with strongly significant positive correlations. Tintinnids with lorica oral diameter of 22-26 μm and 38-42 μm were dominant and contributed 67.35% and 15.13%, respectively, to the total abundance in the boreal assemblage. The distribution and densities of tintinnids in the study area suggest that the Sōya Strait might be a geographical barrier for tintinnids expansion.

  8. Differences in biological traits composition of benthic assemblages between unimpacted habitats.

    PubMed

    Bolam, S G; Garcia, C; Eggleton, J; Kenny, A J; Buhl-Mortensen, L; Gonzalez-Mirelis, G; van Kooten, T; Dinesen, G; Hansen, J; Hiddink, J G; Sciberras, M; Smith, C; Papadopoulou, N; Gumus, A; Van Hoey, G; Eigaard, O R; Bastardie, F; Rijnsdorp, A D

    2017-05-01

    There is an implicit requirement under contemporary policy drivers to understand the characteristics of benthic communities under anthropogenically-unimpacted scenarios. We used a trait-based approach on a large dataset from across the European shelf to determine how functional characteristics of unimpacted benthic assemblages vary between different sedimentary habitats. Assemblages in deep, muddy environments unaffected by anthropogenic disturbance show increased proportions of downward conveyors and surface deposit-feeders, while burrowing, diffusive mixing, scavenging and predation traits assume greater numerical proportions in shallower habitats. Deep, coarser sediments are numerically more dominated by sessile, upward conveyors and suspension feeders. In contrast, unimpacted assemblages of coarse sediments in shallower regions are proportionally dominated by the diffusive mixers, burrowers, scavengers and predators. Finally, assemblages of gravelly sediments exhibit a relatively greater numerical dominance of non-bioturbators and asexual reproducers. These findings may be used to form the basis of ranking habitats along a functional sensitivity gradient. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

  9. Here Comes the Sun ... and I Say, "It' an Assemblage"

    ERIC Educational Resources Information Center

    Skophammer, Karen

    2011-01-01

    In this article, the author discusses how she combines science lesson with a hands-on art project. She used the wonderfully creative suns shown on the Sunday edition of "The CBS Morning Show" to give the students fodder for thought. She describes how to create an assemblage. An assemblage is like a collage, but it moves past the two-dimensional…

  10. Changing Bee and Hoverfly Pollinator Assemblages along an Urban-Rural Gradient

    PubMed Central

    Bates, Adam J.; Sadler, Jon P.; Fairbrass, Alison J.; Falk, Steven J.; Hale, James D.; Matthews, Tom J.

    2011-01-01

    Background The potential for reduced pollination ecosystem service due to global declines of bees and other pollinators is cause for considerable concern. Habitat degradation, destruction and fragmentation due to agricultural intensification have historically been the main causes of this pollinator decline. However, despite increasing and accelerating levels of global urbanization, very little research has investigated the effects of urbanization on pollinator assemblages. We assessed changes in the diversity, abundance and species composition of bee and hoverfly pollinator assemblages in urban, suburban, and rural sites across a UK city. Methodology/Principal Findings Bees and hoverflies were trapped and netted at 24 sites of similar habitat character (churchyards and cemeteries) that varied in position along a gradient of urbanization. Local habitat quality (altitude, shelter from wind, diversity and abundance of flowers), and the broader-scale degree of urbanization (e.g. percentage of built landscape and gardens within 100 m, 250 m, 500 m, 1 km, and 2.5 km of the site) were assessed for each study site. The diversity and abundance of pollinators were both significantly negatively associated with higher levels of urbanization. Assemblage composition changed along the urbanization gradient with some species positively associated with urban and suburban land-use, but more species negatively so. Pollinator assemblages were positively affected by good site habitat quality, in particular the availability of flowering plants. Conclusions/Significance Our results show that urban areas can support diverse pollinator assemblages, but that this capacity is strongly affected by local habitat quality. Nonetheless, in both urban and suburban areas of the city the assemblages had fewer individuals and lower diversity than similar rural habitats. The unique development histories of different urban areas, and the difficulty of assessing mobile pollinator assemblages in just

  11. Mineral parageneses, regional architecture, and tectonic evolution of Franciscan metagraywackes, Cape Mendocino-Garberville-Covelo 30' x 60' quadrangles, northwest California

    USGS Publications Warehouse

    Ernst, W.G.; McLaughlin, Robert J.

    2012-01-01

    The Franciscan Complex is a classic subduction-zone assemblage. In northwest California, it comprises a stack of west vergent thrust sheets: westernmost Eastern Belt outliers; Central Belt mélange; Coastal Belt Yager terrane; Coastal Belt Coastal terrane; Coastal Belt King Range/False Cape terranes. We collected samples and determined P-T conditions of recrystallization for 88 medium-fine-grained metasandstones to assess their subduction-exhumation histories and assembly of the host allochthons. Feebly recrystallized Yager, Coastal, and King Range strata retain clear detrital features. Scattered neoblastic prehnite occurs in several Coastal terrane metasandstones; traces of possible pumpellyite are present in three Yager metaclastic rocks. Pumpellyite ± lawsonite ± aragonite-bearing Central Belt metasandstones are moderately deformed and reconstituted. Intensely contorted, thoroughly recrystallized Eastern Belt affinity quartzose metagraywackes contain lawsonite + jadeitic pyroxene ± aragonite ± glaucophane. We microprobed neoblastic phases in 23 rocks, documenting mineral parageneses that constrain the tectonic accretion and metamorphic P-T evolution of these sheets. Quasi-stable mineral assemblages typify Eastern Belt metasandstones, but mm-sized domains in the Central and Coastal belt rocks failed to achieve chemical equilibrium. Eastern Belt slabs rose from subduction depths approaching 25–30 km, whereas structurally lower Central Belt mélanges returned from ∼15–18 km. Coastal Belt assemblages suggest burial depths less than 5–8 km. Eastern and Central belt allochthons sequentially decoupled from the downgoing oceanic lithosphere and ascended into the accretionary margin; K-feldspar-rich Coastal Belt rocks were stranded along the continental edge without undergoing appreciable subduction, probably during Paleogene unroofing of the older, deeply subducted units of the Franciscan Complex in east-vergent crustal wedges.

  12. Functional and Taxonomic Differentiation of Macrophyte Assemblages Across the Yangtze River Floodplain Under Human Impacts

    PubMed Central

    Zhang, Min; García Molinos, Jorge; Zhang, Xiaolin; Xu, Jun

    2018-01-01

    Human activities and the consequent extirpations of species have been changing the composition of species assemblages worldwide. These anthropogenic impacts alter not only the richness of assemblages but also the biological dissimilarity among them. One of the main gaps in the assessment of biodiversity change in freshwater ecosystems is our limited understanding regarding how taxonomic and functional facets of macrophyte assemblages respond to human impacts on regional scales. Here, we assess the temporal (before 1970s against after 2000s) changes in taxonomic and functional richness and compositional dissimilarities, partitioned into its turnover and nestedness components, of freshwater macrophyte assemblages across the floodplain lakes of the Yangtze River in China. We found that functional and taxonomic assemblage differentiation occurred simultaneously under increasing human impact, concomitant to a general decrease in functional and taxonomic richness. However, this effect weakened when the historical level of taxonomic dissimilarity among assemblages was high. Macrophyte species with large dispersal range and submersed life form were significantly more susceptible to extirpation. The impact of human activities on differentiation was complex but habitat loss and fishery intensity were consistently the main drivers of assemblage change in these lakes, whereas water quality (i.e., light pollution and nutrient enrichment) had weaker effects. Further, macrophyte taxonomic and functional differentiation was mainly driven by the nestedness component of dissimilarity, accounting for changes in assemblage composition related to changes in species richness independent of species replacement. This result, markedly different from previous studies on freshwater fish assemblages conducted in these lakes, represents a novel contribution toward achieving a more holistic understanding of how human impacts contribute to shape community assemblages in natural ecosystems. PMID

  13. Shaping up: a geometric morphometric approach to assemblage ecomorphology.

    PubMed

    Bower, L M; Piller, K R

    2015-09-01

    This study adopts an ecomorphological approach to test the utility of body shape as a predictor of niche relationships among a stream fish assemblage of the Tickfaw River (Lake Pontchartrain Basin) in southeastern Louisiana, U.S.A. To examine the potential influence of evolutionary constraints, analyses were performed with and without the influence of phylogeny. Fish assemblages were sampled throughout the year, and ecological data (habitat and tropic guild) and body shape (geometric morphometric) data were collected for each fish specimen. Multivariate analyses were performed to examine relationships and differences between body shape and ecological data. Results indicate that a relationship exists between body shape and trophic guild as well as flow regime, but no significant correlation between body shape and substratum was found. Body shape was a reliable indicator of position within assemblage niche space. © 2015 The Fisheries Society of the British Isles.

  14. Bone mineral measurement from Apollo experiment M-078. [derangement of bone mineral metabolism in spacecrews

    NASA Technical Reports Server (NTRS)

    Vogel, J. M.; Rambaut, P. C.; Smith, M. C., Jr.

    1974-01-01

    Loss of mineral from bone during periods of immobilization, recumbency, or weightlessness is examined. This report describes the instrumentation, technique, and bone mineral changes observed preflight and postflight for the Apollo 14, 15, and 16 missions. The bone mineral changes documented during the Apollo Program are reviewed, and their relevance to future missions is discussed.

  15. Understanding the effects of predictability, duration, and spatial pattern of drying on benthic invertebrate assemblages in two contrasting intermittent streams

    PubMed Central

    von Schiller, Daniel; Barberá, Gonzalo G.; Díaz, Angela M.; Arce, Maria Isabel; del Campo, Rubén; Tockner, Klement

    2018-01-01

    In the present study, we examined the effects of different drying conditions on the composition, structure and function of benthic invertebrate assemblages. We approached this objective by comparing invertebrate assemblages in perennial and intermittent sites along two intermittent Mediterranean streams with contrasting predictability, duration, and spatial patterns of drying: Fuirosos (high predictability, short duration, downstream drying pattern) and Rogativa (low predictability, long duration, patchy drying pattern). Specifically, we quantified the contribution of individual taxa to those differences, the degree of nestedness, and shifts in the composition, structure and function of benthic invertebrate assemblages along flow intermittence gradients. We observed greater effects of drying on the benthic invertebrate composition in Fuirosos than in Rogativa, resulting in a higher dissimilarity of assemblages between perennial and intermittent sites, as well as a lower degree of nestedness. Furthermore, a higher number of biotic metrics related to richness, abundance and biological traits were significantly different between perennial and intermittent sites in Fuirosos, despite a shorter dry period compared to Rogativa. At the same time, slightly different responses were detected during post-drying (autumn) than pre-drying (spring) conditions in this stream. In Rogativa, shifts in benthic invertebrate assemblages along increasing gradients of flow intermittence were found for three metrics (Ephemeroptera, Plecoptera and Trichoptera (EPT) and Odonata, Coleoptera and Heteroptera (OCH) abundances and aerial active dispersal. Furthermore, we demonstrated that combined gradients of dry period duration and distance to nearest perennial reach can generate complex, and different, responses of benthic invertebrate assemblages, depending on the flow intermittence metric. Our study advances the notion that special attention should be paid to the predictability, duration and

  16. A PROCESS FOR DEVELOPING AND EVALUATING INDICIES OF FISH ASSEMBLAGE INTEGRITY

    EPA Science Inventory

    We describe a general process for developing an index of fish assemblage integrity, using the Willamette Valley of Oregon, U.S.A., as an example. Such an index is useful for assessing the effects of humans on entire fish assemblages, and the general process can be applied to any ...

  17. Relationships between structural complexity, coral traits, and reef fish assemblages

    NASA Astrophysics Data System (ADS)

    Darling, Emily S.; Graham, Nicholas A. J.; Januchowski-Hartley, Fraser A.; Nash, Kirsty L.; Pratchett, Morgan S.; Wilson, Shaun K.

    2017-06-01

    With the ongoing loss of coral cover and the associated flattening of reef architecture, understanding the links between coral habitat and reef fishes is of critical importance. Here, we investigate whether considering coral traits and functional diversity provides new insights into the relationship between structural complexity and reef fish communities, and whether coral traits and community composition can predict structural complexity. Across 157 sites in Seychelles, Maldives, the Chagos Archipelago, and Australia's Great Barrier Reef, we find that structural complexity and reef zone are the strongest and most consistent predictors of reef fish abundance, biomass, species richness, and trophic structure. However, coral traits, diversity, and life histories provided additional predictive power for models of reef fish assemblages, and were key drivers of structural complexity. Our findings highlight that reef complexity relies on living corals—with different traits and life histories—continuing to build carbonate skeletons, and that these nuanced relationships between coral assemblages and habitat complexity can affect the structure of reef fish assemblages. Seascape-level estimates of structural complexity are rapid and cost effective with important implications for the structure and function of fish assemblages, and should be incorporated into monitoring programs.

  18. Climate mediates the effects of disturbance on ant assemblage structure.

    PubMed

    Gibb, Heloise; Sanders, Nathan J; Dunn, Robert R; Watson, Simon; Photakis, Manoli; Abril, Silvia; Andersen, Alan N; Angulo, Elena; Armbrecht, Inge; Arnan, Xavier; Baccaro, Fabricio B; Bishop, Tom R; Boulay, Raphael; Castracani, Cristina; Del Toro, Israel; Delsinne, Thibaut; Diaz, Mireia; Donoso, David A; Enríquez, Martha L; Fayle, Tom M; Feener, Donald H; Fitzpatrick, Matthew C; Gómez, Crisanto; Grasso, Donato A; Groc, Sarah; Heterick, Brian; Hoffmann, Benjamin D; Lach, Lori; Lattke, John; Leponce, Maurice; Lessard, Jean-Philippe; Longino, John; Lucky, Andrea; Majer, Jonathan; Menke, Sean B; Mezger, Dirk; Mori, Alessandra; Munyai, Thinandavha C; Paknia, Omid; Pearce-Duvet, Jessica; Pfeiffer, Martin; Philpott, Stacy M; de Souza, Jorge L P; Tista, Melanie; Vasconcelos, Heraldo L; Vonshak, Merav; Parr, Catherine L

    2015-06-07

    Many studies have focused on the impacts of climate change on biological assemblages, yet little is known about how climate interacts with other major anthropogenic influences on biodiversity, such as habitat disturbance. Using a unique global database of 1128 local ant assemblages, we examined whether climate mediates the effects of habitat disturbance on assemblage structure at a global scale. Species richness and evenness were associated positively with temperature, and negatively with disturbance. However, the interaction among temperature, precipitation and disturbance shaped species richness and evenness. The effect was manifested through a failure of species richness to increase substantially with temperature in transformed habitats at low precipitation. At low precipitation levels, evenness increased with temperature in undisturbed sites, peaked at medium temperatures in disturbed sites and remained low in transformed sites. In warmer climates with lower rainfall, the effects of increasing disturbance on species richness and evenness were akin to decreases in temperature of up to 9°C. Anthropogenic disturbance and ongoing climate change may interact in complicated ways to shape the structure of assemblages, with hot, arid environments likely to be at greatest risk. © 2015 The Author(s) Published by the Royal Society. All rights reserved.

  19. Climate mediates the effects of disturbance on ant assemblage structure

    PubMed Central

    Gibb, Heloise; Sanders, Nathan J.; Dunn, Robert R.; Watson, Simon; Photakis, Manoli; Abril, Silvia; Andersen, Alan N.; Angulo, Elena; Armbrecht, Inge; Arnan, Xavier; Baccaro, Fabricio B.; Bishop, Tom R.; Boulay, Raphael; Castracani, Cristina; Del Toro, Israel; Delsinne, Thibaut; Diaz, Mireia; Donoso, David A.; Enríquez, Martha L.; Fayle, Tom M.; Feener, Donald H.; Fitzpatrick, Matthew C.; Gómez, Crisanto; Grasso, Donato A.; Groc, Sarah; Heterick, Brian; Hoffmann, Benjamin D.; Lach, Lori; Lattke, John; Leponce, Maurice; Lessard, Jean-Philippe; Longino, John; Lucky, Andrea; Majer, Jonathan; Menke, Sean B.; Mezger, Dirk; Mori, Alessandra; Munyai, Thinandavha C.; Paknia, Omid; Pearce-Duvet, Jessica; Pfeiffer, Martin; Philpott, Stacy M.; de Souza, Jorge L. P.; Tista, Melanie; Vasconcelos, Heraldo L.; Vonshak, Merav; Parr, Catherine L.

    2015-01-01

    Many studies have focused on the impacts of climate change on biological assemblages, yet little is known about how climate interacts with other major anthropogenic influences on biodiversity, such as habitat disturbance. Using a unique global database of 1128 local ant assemblages, we examined whether climate mediates the effects of habitat disturbance on assemblage structure at a global scale. Species richness and evenness were associated positively with temperature, and negatively with disturbance. However, the interaction among temperature, precipitation and disturbance shaped species richness and evenness. The effect was manifested through a failure of species richness to increase substantially with temperature in transformed habitats at low precipitation. At low precipitation levels, evenness increased with temperature in undisturbed sites, peaked at medium temperatures in disturbed sites and remained low in transformed sites. In warmer climates with lower rainfall, the effects of increasing disturbance on species richness and evenness were akin to decreases in temperature of up to 9°C. Anthropogenic disturbance and ongoing climate change may interact in complicated ways to shape the structure of assemblages, with hot, arid environments likely to be at greatest risk. PMID:25994675

  20. Subglacial hydrothermal alteration minerals in Jökulhlaup deposits of Southern Iceland, with implications for detecting past or present habitable environments on Mars.

    PubMed

    Warner, Nicholas H; Farmer, Jack D

    2010-06-01

    Jökulhlaups are terrestrial catastrophic outfloods, often triggered by subglacial volcanic eruptions. Similar volcano-ice interactions were likely important on Mars where magma/lava may have interacted with the planet's cryosphere to produce catastrophic floods. As a potential analogue to sediments deposited during martian floods, the Holocene sandurs of Iceland are dominated by basaltic clasts derived from the subglacial environment and deposited during jökulhlaups. Palagonite tuffs and breccias, present within the deposits, represent the primary alteration lithology. The surface abundance of palagonite on the sandurs is 1-20%. X-ray diffraction (XRD) analysis of palagonite breccias confirms a mineral assemblage of zeolites, smectites, low-quartz, and kaolinite. Oriented powder X-ray diffractograms (< 2 microm fraction) for palagonite breccia clasts and coatings reveal randomly ordered smectite, mixed layer smectite/illite, zeolites, and quartz. Visible light-near infrared (VNIR) and shortwave infrared (SWIR) lab spectroscopic data of the same palagonite samples show H2O/OH(-) absorptions associated with clays and zeolites. SWIR spectra derived from Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) images of the sandurs reveal Al-OH(-) and Si-OH(-) absorption features. The identified alteration mineral assemblage is consistent with low temperature (100-140 degrees C) hydrothermal alteration of basaltic material within the subglacial environment. These results suggest that potential martian analog sites that contain a similar suite of hydrated minerals may be indicative of past hydrothermal activity and locations where past habitable environments for microbial life may be found.

  1. Multilocus genotyping of human Giardia isolates suggests limited zoonotic transmission and association between assemblage B and flatulence in children.

    PubMed

    Lebbad, Marianne; Petersson, Ingvor; Karlsson, Lillemor; Botero-Kleiven, Silvia; Andersson, Jan O; Svenungsson, Bo; Svärd, Staffan G

    2011-08-01

    Giardia intestinalis is one of the most common diarrhea-related parasites in humans, where infection ranges from asymptomatic to acute or chronic disease. G. intestinalis consists of eight genetically distinct genotypes or assemblages, designated A-H, and assemblages A and B can infect humans. Giardiasis has been classified as a possible zoonotic disease but the role of animals in human disease transmission still needs to be proven. We tried to link different assemblages and sub-assemblages of G. intestinalis isolates from Swedish human patients to clinical symptoms and zoonotic transmission. Multilocus sequence-based genotyping of 207 human Giardia isolates using three gene loci: ß-giardin, glutamate dehydrogenase (gdh), and triose phosphate isomerase (tpi) was combined with assemblage-specific tpi PCRs. This analysis identified 73 patients infected with assemblage A, 128 with assemblage B, and six with mixed assemblages A+B. Multilocus genotypes (MLGs) were easily determined for the assemblage A isolates, and most patients with this genotype had apparently been infected through anthroponotic transmission. However, we also found evidence of limited zoonotic transmission of Giardia in Sweden, since a few domestic human infections involved the same assemblage A MLGs previously reported in Swedish cats and ruminants. Assemblage B was detected more frequently than assemblage A and it was also more common in patients with suspected treatment failure. However, a large genetic variability made determination of assemblage B MLGs problematic. Correlation between symptoms and assemblages was found only for flatulence, which was significantly more common in children less than six years of age infected with assemblage B. This study shows that certain assemblage A subtypes are potentially zoonotic and that flatulence is connected to assemblage B infections in young children. Determination of MLGs from assemblages A and B can be a valuable tool in outbreak situations and to

  2. Multilocus Genotyping of Human Giardia Isolates Suggests Limited Zoonotic Transmission and Association between Assemblage B and Flatulence in Children

    PubMed Central

    Lebbad, Marianne; Petersson, Ingvor; Karlsson, Lillemor; Botero-Kleiven, Silvia; Andersson, Jan O.; Svenungsson, Bo; Svärd, Staffan G.

    2011-01-01

    Background Giardia intestinalis is one of the most common diarrhea-related parasites in humans, where infection ranges from asymptomatic to acute or chronic disease. G. intestinalis consists of eight genetically distinct genotypes or assemblages, designated A–H, and assemblages A and B can infect humans. Giardiasis has been classified as a possible zoonotic disease but the role of animals in human disease transmission still needs to be proven. We tried to link different assemblages and sub-assemblages of G. intestinalis isolates from Swedish human patients to clinical symptoms and zoonotic transmission. Methodology/Principal Findings Multilocus sequence-based genotyping of 207 human Giardia isolates using three gene loci: ß-giardin, glutamate dehydrogenase (gdh), and triose phosphate isomerase (tpi) was combined with assemblage-specific tpi PCRs. This analysis identified 73 patients infected with assemblage A, 128 with assemblage B, and six with mixed assemblages A+B. Multilocus genotypes (MLGs) were easily determined for the assemblage A isolates, and most patients with this genotype had apparently been infected through anthroponotic transmission. However, we also found evidence of limited zoonotic transmission of Giardia in Sweden, since a few domestic human infections involved the same assemblage A MLGs previously reported in Swedish cats and ruminants. Assemblage B was detected more frequently than assemblage A and it was also more common in patients with suspected treatment failure. However, a large genetic variability made determination of assemblage B MLGs problematic. Correlation between symptoms and assemblages was found only for flatulence, which was significantly more common in children less than six years of age infected with assemblage B. Conclusions/Significance This study shows that certain assemblage A subtypes are potentially zoonotic and that flatulence is connected to assemblage B infections in young children. Determination of MLGs from

  3. Metal endowment reflected in chemical composition of silicates and sulfides of mineralized porphyry copper systems, Urumieh-Dokhtar magmatic arc, Iran

    NASA Astrophysics Data System (ADS)

    Zarasvandi, Alireza; Rezaei, Mohsen; Raith, Johann G.; Pourkaseb, Houshang; Asadi, Sina; Saed, Madineh; Lentz, David R.

    2018-02-01

    The present work attempts to discriminate between the geochemical features of magmatic-hydrothermal systems involved in the early stages of mineralization in high grade versus low grade porphyry copper systems, using chemical compositions of silicate and sulfide minerals (i.e., plagioclase, biotite, pyrite and chalcopyrite). The data indicate that magmatic plagioclase in all of the porphyry copper systems studied here has high An% and Al content with a significant trend of evolution toward AlAl3SiO8 and □Si4O8 endmembers, providing insight into the high melt water contents of the parental magmas. Comparably, excess Al and An% in the high grade deposits appears to be higher than that of selected low grade deposits, representing a direct link between the amounts of exsolving hydrothermal fluids and the potential of metal endowment in porphyry copper deposits (PCDs). Also, higher Al contents accompanied by elevated An% are linked to the increasing intensity of disruptive alteration (phyllic) in feldspars from the high grade deposits. As calculated from biotite compositions, chloride contents are higher in the exsolving hydrothermal fluids that contributed to the early mineralization stages of highly mineralized porphyry systems. However, as evidenced by scattered and elevated log (fH2O)/(fHF) and log (fH2O)/(fHCl) values, chloride contents recorded in biotite could be influenced by post potassic fluids. Geothermometry of biotite associated with the onset of sulfide mineralization indicates that there is a trend of increasing temperature from high grade to low grade porphyry systems. Significantly, this is coupled with a sharp change in copper content of pyrite assemblages precipitated at the early stages of mineralization such that Cu decreased with increasing temperature. Based on EMPA and detailed WDS elemental mapping, trace elements do not exhibit complex compositional zoning or solid solution in the sulfide structure. Nevertheless, significant amounts of Cu and

  4. Depth as an organizer of fish assemblages in floodplain lakes

    USGS Publications Warehouse

    Miranda, L.E.

    2011-01-01

    Depth reduction is a natural process in floodplain lakes, but in many basins has been accelerated by anthropogenic disturbances. A diverse set of 42 floodplain lakes in the Yazoo River Basin (Mississippi, USA) was examined to test the hypothesis of whether depth reduction was a key determinant of water quality and fish assemblage structure. Single and multiple variable analyses were applied to 10 commonly monitored water variables and 54 fish species. Results showed strong associations between depth and water characteristics, and between depth and fish assemblages. Deep lakes provided less variable environments, clearer water, and a wider range of microhabitats than shallow lakes. The greater environmental stability was reflected by the dominant species in the assemblages, which included a broader representation of large-body species, species less tolerant of extreme water quality, and more predators. Stability in deep lakes was further reflected by reduced among-lake variability in taxa representation. Fish assemblages in shallow lakes were more variable than deep lakes, and commonly dominated by opportunistic species that have early maturity, extended breeding seasons, small adult size, and short lifespan. Depth is a causal factor that drives many physical and chemical variables that contribute to organizing fish assemblages in floodplain lakes. Thus, correlations between fish and water transparency, temperature, oxygen, trophic state, habitat structure, and other environmental descriptors may ultimately be totally or partly regulated by depth. In basins undergoing rapid anthropogenic modifications, local changes forced by depth reductions may be expected to eliminate species available from the regional pool and could have considerable ecological implications. ?? 2010 Springer Basel AG (outside the USA).

  5. Shining Light on Benthic Macroalgae: Mechanisms of Complementarity in Layered Macroalgal Assemblages

    PubMed Central

    Tait, Leigh W.; Hawes, Ian; Schiel, David R.

    2014-01-01

    Phototrophs underpin most ecosystem processes, but to do this they need sufficient light. This critical resource, however, is compromised along many marine shores by increased loads of sediments and nutrients from degraded inland habitats. Increased attenuation of total irradiance within coastal water columns due to turbidity is known to reduce species' depth limits and affect the taxonomic structure and architecture of algal-dominated assemblages, but virtually no attention has been paid to the potential for changes in spectral quality of light energy to impact production dynamics. Pioneering studies over 70 years ago showed how different pigmentation of red, green and brown algae affected absorption spectra, action spectra, and photosynthetic efficiency across the PAR (photosynthetically active radiation) spectrum. Little of this, however, has found its way into ecological syntheses of the impacts of optically active contaminants on coastal macroalgal communities. Here we test the ability of macroalgal assemblages composed of multiple functional groups (including representatives from the chlorophyta, rhodophyta and phaeophyta) to use the total light resource, including different light wavelengths and examine the effects of suspended sediments on the penetration and spectral quality of light in coastal waters. We show that assemblages composed of multiple functional groups are better able to use light throughout the PAR spectrum. Macroalgal assemblages with four sub-canopy species were between 50–75% more productive than assemblages with only one or two sub-canopy species. Furthermore, attenuation of the PAR spectrum showed both a loss of quanta and a shift in spectral distribution with depth across coastal waters of different clarity, with consequences to productivity dynamics of diverse layered assemblages. The processes of light complementarity may help provide a mechanistic understanding of how altered turbidity affects macroalgal assemblages in coastal

  6. Nutrient dynamics and plant assemblages of Macrotermes falciger mounds in a savanna ecosystem

    NASA Astrophysics Data System (ADS)

    Muvengwi, Justice; Ndagurwa, Hilton G. T.; Nyenda, Tatenda; Mbiba, Monicah

    2016-10-01

    Termites through mound construction and foraging activities contribute significantly to carbon and nutrient fluxes in nutrient-poor savannas. Despite this recognition, studies on the influence of termite mounds on carbon and nitrogen dynamics in sub-tropical savannas are limited. In this regard, we examined soil nutrient concentrations, organic carbon and nitrogen mineralization in incubation experiments in mounds of Macrotermes falciger and surrounding soils of sub-tropical savanna, northeast Zimbabwe. We also addressed whether termite mounds altered the plant community and if effects were similar across functional groups i.e. grasses, forbs or woody plants. Mound soils had significantly higher silt and clay content, pH and concentrations of calcium (Ca), magnesium (Mg), potassium (K), organic carbon (C), ammonium (NH4+) and nitrate (NO3-) than surrounding soils, with marginal differences in phosphorus (P) and sodium (Na) between mounds and matrix soils. Nutrient enrichment increased by a factor ranging from 1.5 for C, 4.9 for Mg up to 10.3 for Ca. Although C mineralization, nitrification and nitrification fraction were similar between mounds and matrix soils, nitrogen mineralization was elevated on mounds relative to surrounding matrix soils. As a result, termite mounds supported unique plant communities rich and abundant in woody species but less diverse in grasses and forbs than the surrounding savanna matrix in response to mound-induced shifts in soil parameters specifically increased clay content, drainage and water availability, nutrient status and base cation (mainly Ca, Mg and Na) concentration. In conclusion, by altering soil properties such as texture, moisture content and nutrient status, termite mounds can alter the structure and composition of sub-tropical savanna plant communities, and these results are consistent with findings in other savanna systems suggesting that increase in soil clay content, nutrient status and associated changes in the plant

  7. Diversity, distribution and population size structure of deep Mediterranean gorgonian assemblages (Menorca Channel, Western Mediterranean Sea)

    NASA Astrophysics Data System (ADS)

    Grinyó, Jordi; Gori, Andrea; Ambroso, Stefano; Purroy, Ariadna; Calatayud, Clara; Dominguez-Carrió, Carlos; Coppari, Martina; Lo Iacono, Claudio; López-González, Pablo J.; Gili, Josep-Maria

    2016-06-01

    Gorgonians are a key group of organisms in benthic marine communities with a wide bathymetric and geographical distribution. Although their presence on continental shelves and slopes has been known for more than 100 years, knowledge concerning the ecology of deep gorgonian species is still in a very preliminary stage. To overcome this situation, gorgonian assemblages located at 40-360 m depth were studied over a large geographical area on the continental shelf and upper slope of the Menorca Channel (Western Mediterranean Sea). A quantitative analysis of video transects recorded by a manned submersible and a remotely operated vehicle, were used to examine the diversity, distribution and demography of gorgonian species. Results showed high gorgonian diversity within this depth range (a total of nine species were observed) compared to Mediterranean coastal areas. Gorgonian assemblages on the continental shelf and upper slope were mostly monospecific (respectively 73% and 76% of occupied sampling units contained one single species), whereas shelf edge assemblages were highly multispecific (92% of occupied sampling units contained several species). This contrasts with the monospecificity of Mediterranean coastal gorgonian assemblages. Gorgonian populations on the continental shelf were mostly dominated by small colonies (88% of measured colonies) with few intermediate and large colonies (12% of measured colonies). In deeper areas small colonies were still dominant (60% of measured colonies), but intermediate and large colonies were much more abundant (40% of measured colonies). This suggests high recruitment rates on the continental shelf, but perturbations (trammel nets, long lines and strong storms) may limit the presence of intermediate and large colonies. Conversely, on the shelf edge and upper slope a more stable environment may allow colonies to reach larger dimensions. The identification and ecological characterization of these deep assemblages further extends

  8. Interpreting Assemblages with Titanite (Sphene): It Does not have to be Greek to You.

    NASA Technical Reports Server (NTRS)

    Xirouchakis, Dimitrios M.; Lindsley, Donald H.; McKay, Gordon A. (Technical Monitor)

    2000-01-01

    Assemblages with titanite, pyroxene(s), olivine, ilmenite, magnetite, and quartz can be used to constrain the intensive and compositional variables that operate during crystallization. Such assemblages are relatively rare in metamorphic rocks, but they are more common in igneous rocks and more frequently reported in plutonic than volcanic rocks. We used the program QUILF, enhanced with thermodynamic data for titanite, to compute stable reactions among titanite (CaTiOSiO4), Fe-Mg-Ti ilmenite and magnetite (hereafter ilmenite and magnetite), Ca-Mg-Fe pyroxenes and olivine, and quartz, and to evaluate some of the factors that control titanite stability. Calculations at 1, 3, and 6 Kbar and 650, 850, 1100 0 C, in the system CaO - MgO - FeO Fe2O3 - TiO2 - SiO2, suggest that the reactions: Augitc + Ilmenite = Titanite + Magnetite + Quartz and Augite + Ilmenite + Quartz = Titanite + Orthopyroxene, impose well defined fugacity of O2, alpha(sub SiO2), , and compositional restrictions to the assemblages: (1) Titanite + Magnetite + Quartz, (2) Titanite + Orthopyroxene, (3) Augite + Ilmenite, and consequently titanite stability. From our calculations in this system we can draw the following general conclusions: (1) The assemblage Titanite + Magnetite + Quartz is always a good indicator of relatively high fugacity of O2, and it is likely more common in relatively iron-rich bulk compositions and for decreasing temperature and pressure conditions. (2) At high temperatures (>= 650 C) titanite is not stable in quartz-saturated rocks that contain the assemblage Orthopyroxene + Augite + Ilmenite + Magnetite. (3) In quartz-saturated rocks the coexistence of titanite and magnetite with either orthopyroxene or olivine requires a confluence of conditions relating bulk composition, fugacity of O2, and slow cooling. Thus, such assemblages must be rare. (4) Regardless of T and fugacity of O2 conditions, and bulk-composition, titanite is not stable in quartz-absent rocks that contain Olivine

  9. Macroalgal Composition Determines the Structure of Benthic Assemblages Colonizing Fragmented Habitats

    PubMed Central

    Matias, Miguel G.; Arenas, Francisco; Rubal, Marcos; Pinto, Isabel S.

    2015-01-01

    Understanding the consequences of fragmentation of coastal habitats is an important topic of discussion in marine ecology. Research on the effects of fragmentation has revealed complex and context-dependent biotic responses, which prevent generalizations across different habitats or study organisms. The effects of fragmentation in marine environments have been rarely investigated across heterogeneous habitats, since most studies have focused on a single type of habitat or patch. In this study, we assessed the effects of different levels of fragmentation (i.e. decreasing size of patches without overall habitat loss). We measured these effects using assemblages of macro-invertebrates colonizing representative morphological groups of intertidal macroalgae (e.g. encrusting, turf and canopy-forming algae). For this purpose, we constructed artificial assemblages with different combinations of morphological groups and increasing levels of fragmentation by manipulating the amount of bare rock or the spatial arrangement of different species in mixed assemblages. In general, our results showed that 1) fragmentation did not significantly affect the assemblages of macroinvertebrates; 2) at greater levels of fragmentation, there were greater numbers of species in mixed algal assemblages, suggesting that higher habitat complexity promotes species colonization. Our results suggest that predicting the consequences of fragmentation in heterogeneous habitats is dependent on the type and diversity of morphological groups making up those habitats. PMID:26554924

  10. Concealed basalt-matrix diatremes with Cu-Au-Ag-(Mo)-mineralized xenoliths, Santa Cruz Porphyry Cu-(Mo) System, Pinal County, Arizona

    USGS Publications Warehouse

    Vikre, Peter; Graybeal, Frederick T.; Koutz, Fleetwood R.

    2014-01-01

    The Santa Cruz porphyry Cu-(Mo) system near Casa Grande, Arizona, includes the Sacaton mine deposits and at least five other concealed, mineralized fault blocks with an estimated minimum resource of 1.5 Gt @ 0.6% Cu. The Late Cretaceous-Paleocene system has been dismembered and rotated by Tertiary extension, partially eroded, and covered by Tertiary-Quaternary basin-fill deposits. The mine and mineralized fault blocks, which form an 11 km (~7 miles) by 1.6 km (~1 mile) NE-SW–trending alignment, represent either pieces of one large deposit, several deposits, or pieces of several deposits. The southwestern part of the known system is penetrated by three or more diatremes that consist of heterolithic breccia pipes with basalt and clastic matrices, and subannular tuff ring and maar-fill sedimentary deposits associated with vents. The tephra and maar-fill deposits, which are covered by ~485 to 910 m (~1,600–3,000 ft) of basin fill, lie on a mid-Tertiary erosion surface of Middle Proterozoic granite and Late Cretaceous porphyry, which compose most xenoliths in pipes and are the host rocks of the system. Some igneous xenoliths in the pipes contain bornite-chalcopyrite-covellite assemblages with hypogene grades >1 wt % Cu, 0.01 ounces per ton (oz/t) Au, 0.5 oz/t Ag, and small amounts of Mo (<0.01 wt %). These xenoliths were derived from mineralized rocks that have not been encountered in drill holes, and attest to additional, possibly higher-grade deposits within or subjacent to the known system.The geometry, stratigraphy, and temporal relationships of pipes and tephras, interpreted from drill hole spacing and intercepts, multigenerational breccias and matrices, reequilibrated and partially decomposed sulfide-oxide mineral assemblages, melted xenoliths, and breccia matrix compositions show that the diatremes formed in repeated stages. Initial pulses of basalt magma fractured granite, porphyry, and other crustal rocks during intrusion, transported multi-sized fragments

  11. Trophic ecology of largemouth bass and northern pike in allopatric and sympatric assemblages in northern boreal lakes

    USGS Publications Warehouse

    Soupir, Craig A.; Brown, Michael L.; Kallemeyn, Larry W.

    2000-01-01

    Largemouth bass (Micropterus salmoides) and northern pike (Esox lucius) are top predators in the food chain in most aquatic environments that they occupy; however, limited information exists on species interactions in the northern reaches of largemouth bass distribution. We investigated the seasonal food habits of allopatric and sympatric assemblages of largemouth bass and northern pike in six interior lakes within Voyageurs National Park, Minnesota. Percentages of empty stomachs were variable for largemouth bass (38-54%) and northern pike (34.7-66.7%). Fishes (mainly yellow perch, Perca flavescens) comprised greater than 60% (mean percent mass, MPM) of the northern pike diet during all seasons in both allopatric and sympatric assemblages. Aquatic insects (primarily Odonata and Hemiptera) were important in the diets of largemouth bass in all communities (0.0-79.7 MPM). Although largemouth bass were observed in the diet of northern pike, largemouth bass apparently did not prey on northern pike. Seasonal differences were observed in the proportion of aquatic insects (P = 0.010) and fishes (P = 0.023) in the diets of northern pike and largemouth bass. Based on three food categories, jackknifed classifications correctly classified 77 and 92% of northern pike and largemouth bass values, respectively. Percent resource overlap values were biologically significant (greater than 60%) during at least one season in each sympatric assemblage, suggesting some diet overlap.

  12. Natural habitats matter: Determinants of spatial pattern in the composition of animal assemblages of the Czech Republic

    NASA Astrophysics Data System (ADS)

    Divíšek, Jan; Zelený, David; Culek, Martin; Št'astný, Karel

    2014-08-01

    Studies that explore species-environment relationships at a broad scale are usually limited by the availability of sufficient habitat description, which is often too coarse to differentiate natural habitat patches. Therefore, it is not well understood how the distribution of natural habitats affects broad-scale patterns in the distribution of animal species. In this study, we evaluate the role of field-mapped natural habitats, land-cover types derived from remote sensing and climate on the composition of assemblages of five distinct animal groups, namely non-volant mammals, birds, reptiles, amphibians and butterflies native to the Czech Republic. First, we used variation partitioning based on redundancy analysis to evaluate the extent to which the environmental variables and their spatial structure might underlie the observed spatial patterns in the composition of animal assemblages. Second, we partitioned variations explained by climate, natural habitats and land-cover to compare their relative importance. Finally, we tested the independent effects of each variable in order to evaluate the significance of their contributions to the environmental model. Our results showed that spatial patterns in the composition of assemblages of almost all the considered animal groups may be ascribed mostly to variations in the environment. Although the shared effects of climatic variables, natural habitats and land-cover types explained the largest proportion of variation in each animal group, the variation explained purely by natural habitats was always higher than the variation explained purely by climate or land-cover. We conclude that most spatial variation in the composition of assemblages of almost all animal groups probably arises from biological processes operating within a spatially structured environment and suggest that natural habitats are important to explain observed patterns because they often perform better than habitat descriptions based on remote sensing. This

  13. Simulating fish assemblages in riverine networks

    EPA Science Inventory

    We describe a modeling approach for simulating assemblages of fish in riverine landscapes. The approach allows a user to determine the grain and extent of river networks within which fish populations reproduce, move, and survive in response to both environmental drivers and assem...

  14. Inclusions of crichtonite-group minerals in Cr-pyropes from the Internatsionalnaya kimberlite pipe, Siberian Craton: Crystal chemistry, parageneses and relationships to mantle metasomatism

    NASA Astrophysics Data System (ADS)

    Rezvukhin, Dmitriy I.; Malkovets, Vladimir G.; Sharygin, Igor S.; Tretiakova, Irina G.; Griffin, William L.; O'Reilly, Suzanne Y.

    2018-05-01

    Cr-pyrope xenocrysts and associated inclusions of crichtonite-group minerals from the Internatsionalnaya kimberlite pipe were studied to provide new insights into processes in the lithospheric mantle beneath the Mirny kimberlite field, Siberian craton. Pyropes are predominantly of lherzolitic paragenesis (Cr2O3 2-6 wt%) and have trace-element spectra typical for garnets from fertile mantle (gradual increase in chondrite-normalized values from LREE to MREE-HREE). Crichtonite-group minerals commonly occur as monomineralic elongated inclusions, mostly in association with rutile, Mg-ilmenite and Cr-spinel within individual grains of pyrope. Sample INT-266 hosts intergrowth of crichtonite-group mineral and Cl-apatite, while sample INT-324 contains polymineralic apatite- and dolomite-bearing assemblages. Crichtonite-group minerals are Al-rich (1.1-4.5 wt% Al2O3), moderately Zr-enriched (1.3-4.3 wt% ZrO2), and are Ca-, Sr-, and occasionally Ba-dominant in terms of A-site occupancy; they also contain significant amounts of Na and LREE. T-estimates and chemical composition of Cr-pyropes imply that samples represent relatively low-T peridotite assemblages with ambient T ranging from 720 to 820°С. Projected onto the 35 mW/m2 cratonic paleogeotherm for the Mirny kimberlite field (Griffin et al., 1999b. Tectonophysics 310, 1-35), temperature estimates yield a P range of 34-42 kbar ( 110-130 km), which corresponds to a mantle domain in the uppermost part of the diamond stability field. The presence of crichtonite-group minerals in Cr-pyropes has petrological and geochemical implications as evidence for metasomatic enrichment of some incompatible elements in the lithospheric mantle beneath the Mirny kimberlite field. The genesis of Cr-pyropes with inclusions of crichtonite-group minerals is attributed to the percolation of Ca-Sr-Na-LREE-Zr-bearing carbonate-silicate metasomatic agents through Mg- and Cr-rich depleted peridotite protoliths. The findings of several potentially

  15. Isolation and the interaction between a mineral-weathering Rhizobium tropici Q34 and silicate minerals.

    PubMed

    Wang, Rong Rong; Wang, Qi; He, Lin Yan; Qiu, Gang; Sheng, Xia Fang

    2015-05-01

    The purposes of this study were to isolate and evaluate the interaction between mineral-weathering bacteria and silicate minerals (feldspar and biotite). A mineral-weathering bacterium was isolated from weathered rocks and identified as Rhizobium tropici Q34 based on 16S rRNA gene sequence analysis. Si and K concentrations were increased by 1.3- to 4.0-fold and 1.1- to 1.7-fold in the live bacterium-inoculated cultures compared with the controls respectively. Significant increases in the productions of tartaric and succinic acids and extracellular polysaccharides by strain Q34 were observed in cultures with minerals. Furthermore, significantly more tartaric acid and polysaccharide productions by strain Q34 were obtained in the presence of feldspar, while better growth and more citric acid production of strain Q34 were observed in the presence of biotite. Mineral dissolution experiments showed that the organic acids and polysaccharides produced by strain Q34 were also capable of promoting the release of Si and K from the minerals. The results showed that the growth and metabolite production of strain Q34 were enhanced in the presence of the minerals and different mineral exerted distinct impacts on the growth and metabolite production. The bio-weathering process is probably a synergistic action of organic acids and extracellular polysaccharides produced by the bacterium.

  16. Social Equity and the Assemblage of Values in Australian Higher Education

    ERIC Educational Resources Information Center

    Rizvi, Fazal; Lingard, Bob

    2011-01-01

    The paper argues that the policy concept of social equity cannot be adequately understood in a generalised abstract manner, but is better viewed as an assemblage that brings together a number of contrasting, and sometimes competing, values. Our use of assemblage is somewhat eclectic and is designed to underscore the performative character of…

  17. Species richness and trait composition of butterfly assemblages change along an altitudinal gradient.

    PubMed

    Leingärtner, Annette; Krauss, Jochen; Steffan-Dewenter, Ingolf

    2014-06-01

    Species richness patterns along altitudinal gradients are well-documented ecological phenomena, yet very little data are available on how environmental filtering processes influence the composition and traits of butterfly assemblages at high altitudes. We have studied the diversity patterns of butterfly species at 34 sites along an altitudinal gradient ranging from 600 to 2,000 m a.s.l. in the National Park Berchtesgaden (Germany) and analysed traits of butterfly assemblages associated with dispersal capacity, reproductive strategies and developmental time from lowlands to highlands, including phylogenetic analyses. We found a linear decline in butterfly species richness along the altitudinal gradient, but the phylogenetic relatedness of the butterfly assemblages did not increase with altitude. Compared to butterfly assemblages at lower altitudes, those at higher altitudes were composed of species with larger wings (on average 9%) which laid an average of 68% more eggs. In contrast, egg maturation time in butterfly assemblages decreased by about 22% along the altitudinal gradient. Further, butterfly assemblages at higher altitudes were increasingly dominated by less widespread species. Based on our abundance data, but not on data in the literature, population density increased with altitude, suggesting a reversed density-distribution relationship, with higher population densities of habitat specialists in harsh environments. In conclusion, our data provide evidence for significant shifts in the composition of butterfly assemblages and for the dominance of different traits along the altitudinal gradient. In our study, these changes were mainly driven by environmental factors, whereas phylogenetic filtering played a minor role along the studied altitudinal range.

  18. Mollusc assemblages associated with invasive and native Sargassum species

    NASA Astrophysics Data System (ADS)

    Veiga, Puri; Torres, Ana Catarina; Besteiro, Celia; Rubal, Marcos

    2018-06-01

    Molluscs associated with the native macroalga Sargassum flavifolium and the invasive S. muticum were compared. The influence of habitat complexity provided by each macroalga was considered using biomass and fractal measures as proxies of habitat size and architecture, respectively. Results showed that biomass and fractal area of the alga and abundance, specific richness and diversity of the mollusc assemblages were significantly lower in the invasive macroalga and that mollusc assemblage differed significantly between macroalgae. Among species responsible for dissimilarity between macroalgae, microphytobenthos-grazing gastropods were more abundant in the native seaweed whereas two filter-feeding bivalves were more abundant in the invasive. Results also revealed significant correlations between biomass and fractal area with mollusc assemblages. However, the largest correlation coefficients for fractal area suggest more relevance of habitat architecture. Despite being two closely taxonomically macroalgae, of similar morphology, our findings suggest that the function of invasive macroalga as habitat provider differs from the native and induces changes in its associated fauna, which could imply food web modifications.

  19. Protocol for Monitoring Fish Assemblages in Pacific Northwest National Parks

    USGS Publications Warehouse

    Brenkman, Samuel J.; Connolly, Patrick J.

    2008-01-01

    Rivers and streams that drain from Olympic, Mount Rainier, and North Cascades National Parks are among the most protected corridors in the lower 48 States, and represent some of the largest tracts of contiguous, undisturbed habitat throughout the range of several key fish species of the Pacific Northwest. These watersheds are of high regional importance as freshwater habitat sanctuaries for native fish, where habitat conditions are characterized as having little to no disturbance from development, channelization, impervious surfaces, roads, diversions, or hydroelectric projects. Fishery resources are of high ecological and cultural importance in Pacific Northwest National Parks, and significantly contribute to economically important recreational, commercial, and tribal fisheries. This protocol describes procedures to monitor trends in fish assemblages, fish abundance, and water temperature in eight rivers and five wadeable streams in Olympic National Park during summer months, and is based on 4 years of field testing. Fish assemblages link freshwater, marine, and terrestrial ecosystems. They also serve as focal resources of national parks and are excellent indicators of ecological conditions of rivers and streams. Despite the vital importance of native anadromous and resident fish populations, there is no existing monitoring program for fish assemblages in the North Coast and Cascades Network. Specific monitoring objectives of this protocol are to determine seasonal and annual trends in: (1) fish species composition, (2) timing of migration of adult fish, (3) relative abundance, (4) age and size structure, (5) extent of non-native and hatchery fish, and (6) water temperature. To detect seasonal and annual trends in fish assemblages in reference sites, we rely on repeated and consistent annual sampling at each monitoring site. The general rationale for the repeated sampling of reference sites is to ensure that we account for the high interannual variability in fish

  20. Spatial and seasonal patterns of ichthyoplankton assemblages in the Haizhou Bay and its adjacent waters of China

    NASA Astrophysics Data System (ADS)

    Li, Zengguang; Ye, Zhenjiang; Wan, Rong

    2015-12-01

    Surveys were conducted in five voyages in Haizhou Bay and its adjacent coastal area from March to December 2011 during full moon spring tides. The ichthyoplankton assemblages and the environmental factors that affect their spatial and seasonal patterns were determined. Totally 35 and 12 fish egg and larvae taxa were identified, respectively. Over the past several decades, the egg and larval species composition has significantly changed in Haizhou Bay and its adjacent waters, most likely corresponding with the alteration of fishery resources, which are strongly affected by anthropogenic activities and climate change. The Bray-Curtis dissimilarity index identified four assemblages: near-shore bay assemblage, middle bay assemblage and two closely related assemblages (near-shore/middle bay assemblage and middle/edge of bay assemblage). The primary species of each assemblage principally reflected the spawning strategies of adult fish. The near-shore bay assemblage generally occurred in near-shore bay, with depths measuring <20 m, and the middle bay assemblage generally occurred in the middle of bay, with depths measuring 20 to 40 m. Spatial and seasonal variations in ichthyoplankton in each assemblage were determined by interactions between biological behavioral traits and oceanographic features, particularly the variation of local conditions within the constraint of a general reproductive strategy. The results of Spearman's rank correlation analysis indicated that both fish egg and larval abundance were positively correlated with depth, which is critical to the oceanographic features in Haizhou Bay.

  1. Formation of brucite and cronstedtite-bearing mineral assemblages on Ceres

    NASA Astrophysics Data System (ADS)

    Zolotov, Mikhail Yu.

    2014-01-01

    Dwarf planet Ceres is the largest body in the main asteroid belt with a rocky surface and uncertain internal structure. Spectra of Ceres in near- and mid-infrared wavelengths are consistent with the occurrence of brucite, Mg-bearing carbonates, and an Fe-rich phyllosilicate cronstedtite. Spectra of 10 Hygiea and 324 Bamberga imply similar compositions. Here, we considered stabilities of these minerals to constrain their origin. Cronstedtite is most stable at the temperature of ˜0 °C at moderately oxidizing aqueous conditions and at high water/rock ratios. Although cronstedtite could form on planetesimals, the apparent lack of serpentine may indicate its formation by Ceres' temporary surface solutions. Brucite forms at a low activity of dissolved SiO2, at a low fugacity of CO2, and at highly alkaline pH. Brucite and cronstedtite do not form together and may not form deep in the Ceres' interior. The absence of Mg serpentine from Ceres' surface materials and the unlikely occurrence of very olivine-rich rocks do not indicate a formation of brucite through serpentinization of such rocks. Brucite could form by transient near-surface fluids which do not equilibrate with silicates. Temporary fluids could deposit Mg carbonates before, after, or together with brucite at near-surface conditions that favor CO2 degassing. Regardless of Ceres' internal structure, internal thermal and aqueous processes may not affect cold near-surface layers. Percolation of interior fluids is not consistent with the lack of detection of low-solubility salts. However, impacts of ice-rich targets during the Late Heavy Bombardment could account for transient aqueous environments and unusual surface mineralogies of Ceres, Hygiea, and Bamberga. Brucite and Mg carbonates could have formed through hydration and carbonation of MgO evaporated from silicates. Apparently abundant carbonates may indicate an ample impact oxidation of organic matter, and the occurrence of brucite with cronstedtite may

  2. Surface water connectivity drives richness and composition of Arctic lake fish assemblages

    USGS Publications Warehouse

    Laske, Sarah M.; Haynes, Trevor B.; Rosenberger, Amanda E.; Koch, Joshua C.; Wipfli, Mark S.; Whitman, Matthew; Zimmerman, Christian E.

    2016-01-01

    This work provides useful baseline information on the processes that drive the relations between patch connectivity and fish species richness and assemblage composition. The environmental processes that organise fish assemblages in Arctic lakes are likely to change in a warming climate.

  3. Case-Control Study of Risk Factors for Sporadic Giardiasis and Parasite Assemblages in North West England.

    PubMed

    Minetti, Corrado; Lamden, Kenneth; Durband, Caroline; Cheesbrough, John; Platt, Katherine; Charlett, Andre; O'Brien, Sarah J; Fox, Andrew; Wastling, Jonathan M

    2015-10-01

    Giardia duodenalis is a major cause of infectious gastroenteritis worldwide, and it is diversified into eight genetic assemblages (A to H), which are distinguishable only by molecular typing. There is some evidence that the assemblages infecting humans (assemblages A and B) may have different transmission routes, but systematically acquired data, combining epidemiological and molecular findings, are required. We undertook a case-control study with Giardia genotyping in North West England, to determine general and parasite assemblage-specific risk factors. For people without a history of foreign travel, swimming in swimming pools and changing diapers were the most important risk factors for the disease. People infected with assemblage B reported a greater number of symptoms and higher frequencies of vomiting, abdominal pain, swollen stomach, and loss of appetite, compared with people infected with assemblage A. More importantly, keeping a dog was associated only with assemblage A infections, suggesting the presence of a potential zoonotic reservoir for this assemblage. This is the first case-control study to combine epidemiological data with Giardia genotyping, and it shows the importance of integrating these two levels of information for better understanding of the epidemiology of this pathogen. Copyright © 2015, Minetti et al.

  4. Response of megabenthic assemblages to different scales of habitat heterogeneity on the Mauritanian slope

    NASA Astrophysics Data System (ADS)

    Jones, Daniel O. B.; Brewer, Michael E.

    2012-09-01

    The topographically complex deep seabed on the Mauritanian slope, from 990 to 1460 m water depth, was imaged with video in an extensive quantitative survey of 17,199 m2 of seafloor using a Remote Operated Vehicle (ROV). This study investigated the influence of habitat heterogeneity at two scales on the megafaunal assemblages observed by ROV. Changes in megafaunal assemblages on the Mauritanian slope were assessed at a broad scale, within depth zones, and at a finer scale, in response to changes in local geomorphology associated with submarine landslides. Geomorphology was determined by classification of habitat parameters (slope, aspect, bathymetric position, curvature, fractal dimension and ruggedness) derived from an autonomous underwater vehicle-based multibeam bathymetry survey. Habitat parameters were classified by Iterative Self Organizing Clustering into six major geomorphological groups, four of which were assessed in the ROV video survey. A total of 29 megafaunal taxa were observed along the entire survey, with an overall average faunal density of 0.344 ind m-2. Megafaunal assemblage density, species richness and evenness varied significantly across the depth range of the survey in the most common geomorphological zone (sedimentary plains of low slope and complexity). Characteristic species inhabited the shallow areas (asteroid, ophiuroid, anemone, small macrourid), intermediate areas (Benthothuria funabris, black cerianthid, squat lobster) and deeper areas (the holothurians Enypniastes eximia and Elipidia echinata). Megafaunal density, species richness and evenness were not significantly different between geomorphogical groups within one depth zone (1300-1400 m). However, the steepest zone, on the edge of a major headwall feature, had four unique taxa (Parapagurus pilosimanus, a comatulid crinoid, a gorgonian and its associated ophiuroid).

  5. Drivers of larval fish assemblage shift during the spring-summer transition in the coastal Mediterranean

    NASA Astrophysics Data System (ADS)

    Álvarez, Itziar; Catalán, Ignacio A.; Jordi, Antoni; Palmer, Miquel; Sabatés, Ana; Basterretxea, Gotzon

    2012-01-01

    The influence of coastal environmental conditions from winter-spring to summer on fish larvae assemblages in a temperate area has suggested a seasonal shift in ecosystem-level variation through which trophic pathways shift from the pelagic to the benthic system. This variation may be related to marked effects in the reproductive strategies in the fishes inhabiting the area and indirectly affect ichthyoplankton assemblages. Larval fish assemblages were sampled fortnightly at three stations located in coastal waters off southern Mallorca (Western Mediterranean) from March to August 2007, covering the main spawning period for the resident coastal fish in this region. The larval fish assemblage showed clear seasonality with higher specific abundance but lower diversity in the spring. Two main assemblages were identified: a spring assemblage, occurring at surface seawater temperatures <20 °C and dominated by species with relatively larger home ranges, such as Boops boops, Sardina pilchardus, Trachurus trachurus, and Spicara smaris, and a summer assemblage characterised by the presence of the benthopelagic Coris julis, Serranus hepatus, Serranus cabrilla and Mullus spp., among others. The shift between these ichthyoplankton communities occurred in early June, coinciding with the onset of summer hydrographical conditions and the local benthic productivity peak.

  6. Alteration mineral mapping for iron prospecting using ETM+ data, Tonkolili iron field, northern Sierra Leone

    NASA Astrophysics Data System (ADS)

    Mansaray, Lamin R.; Liu, Lei; Zhou, Jun; Ma, Zhimin

    2013-10-01

    The Tonkolili iron field in northern Sierra Leone has the largest known iron ore deposit in Africa. It occurs in a greenstone belt in an Achaean granitic basement. This study focused mainly on mapping areas with iron-oxide and hydroxyl bearing minerals, and identifying potential areas for haematite mineralization and banded iron formations (BIFs) in Tonkolili. The predominant mineral assemblage at the surface (laterite duricrust) of this iron field is haematitegoethite- limonite ±magnetite. The mineralization occurs in quartzitic banded ironstones, layered amphibolites, granites, schists and hornblendites. In this study, Crosta techniques were applied on Enhanced Thematic Mapper (ETM+) data to enhance areas with alteration minerals and target potential areas of haematite and BIF units in the Tonkolili iron field. Synthetic analysis shows that alteration zones mapped herein are consistent with the already discovered magnetite BIFs in Tonkolili. Based on the overlaps of the simplified geological map and the remote sensing-based alteration mineral maps obtained in this study, three new haematite prospects were inferred within, and one new haematite prospect was inferred outside the tenement boundary of the Tonkolili exploration license. As the primary iron mineral in Tonkolili is magnetite, the study concludes that, these haematite prospects could also be underlain by magnetite BIFs. This study also concludes that, the application of Crosta techniques on ETM+ data is effective not only in mapping iron-oxide and hydroxyl alterations but can also provide a basis for inferring areas of potential iron resources in Algoma-type banded iron formations (BIFs), such as those in the Tonkolili field.

  7. Kosnarite, KZr2(PO4)3, a new mineral from Mount Mica and Black Mountain, Oxford County, Maine

    USGS Publications Warehouse

    Brownfield, M.E.; Foord, E.E.; Sutley, S.J.; Botinelly, T.

    1993-01-01

    Kosnarite, ideally KZr2(PO4)3, has been identified as part of a late-stage, secondary phosphate mineral assemblage from the Mount Mica pegmatite at Paris, and from the Black Mountain pegmatite, Rumford, Oxford County, Maine. Kosnarite from Mount Mica occurs as pseudocubic rhombohedral crystals, as much as 0.9 mm in maximum dimension, that display the dominant {102} form. Color ranges from pale blue to blue-green to nearly colorless. The mineral has a white streak, is transparent, has a vitreous luster, and is nonfluorescent in ultraviolet light. It has a hardness of 4.5, is brittle with a conchoidal fracture, and has perfect {102} cleavage. Kosnarite from Black Mountain is almost pure KZr2(PO4)3 with only trace amounts of Hf, Mn, Na, and Rb. The mineral is one of three known alkali zirconium phosphates; the others are gainesite and the Cs analogue of gainesite. -from Author

  8. Bird assemblage response to restoration of fire-suppressed longleaf pine sandhills.

    PubMed

    Steen, David A; Conner, L M; Smith, Lora L; Provencher, Louis; Hiers, J Kevin; Pokswinski, Scott; Helms, Brian S; Guyer, Craig

    2013-01-01

    The ecological restoration of fire-suppressed habitats may require a multifaceted approach. Removal of hardwood trees together with reintroduction of fire has been suggested as a method of restoring fire-suppressed longleaf pine (Pinus palustris) forests; however, this strategy, although widespread, has not been evaluated on large spatial and temporal scales. We used a landscape-scale experimental design to examine how bird assemblages in fire-suppressed longleaf pine sandhills responded to fire alone or fire following mechanical removal or herbicide application to reduce hardwood levels. Individual treatments were compared to fire-suppressed controls and reference sites. After initial treatment, all sites were managed with prescribed fire, on an approximately two- to three-year interval, for over a decade. Nonmetric multidimensional scaling ordinations suggested that avian assemblages on sites that experienced any form of hardwood removal differed from assemblages on both fire-suppressed sites and reference sites 3-4 years after treatment (i.e., early posttreatment). After >10 years of prescribed burning on all sites (i.e., late posttreatment), only assemblages at sites treated with herbicide were indistinguishable from assemblages at reference sites. By the end of the study, individual species that were once indicators of reference sites no longer contributed to making reference sites unique. Occupancy modeling of these indicator species also demonstrated increasing similarity across treatments over time. Overall, although we documented long-term and variable assemblage-level change, our results indicate occupancy for birds considered longleaf pine specialists was similar at treatment and reference sites after over a decade of prescribed burning, regardless of initial method of hardwood removal. In other words, based on the response of species highly associated with the habitat, we found no justification for the added cost and effort of fire surrogates; fire

  9. Identical Assemblage of Giardia duodenalis in Humans, Animals and Vegetables in an Urban Area in Southern Brazil Indicates a Relationship among Them

    PubMed Central

    Colli, Cristiane Maria; Bezagio, Renata Coltro; Nishi, Letícia; Bignotto, Thaís Souto; Ferreira, Érika Cristina; Falavigna-Guilherme, Ana Lúcia; Gomes, Mônica Lúcia

    2015-01-01

    Background Giardia duodenalis infects humans and other mammals by ingestion of cysts in contaminated water or food, or directly in environments with poor hygiene. Eight assemblages, designated A–H, are described for this species. Methodology/Principal Findings We investigated by microscopy or by direct immunofluorescence technique the occurrence of G. duodenalis in 380 humans, 34 animals, 44 samples of water and 11 of vegetables. G. duodenalis cysts present in samples were genotyped through PCR-RFLP of β giardin and glutamate dehydrogenase (gdh) genes and sequencing of gdh. The gdh gene was amplified in 76.5% (26/34) of the human faeces samples with positive microscopy and in 2.9% (1/34) of negative samples. In 70.4% (19/27) of the positive samples were found BIV assemblage. In two samples from dogs with positive microscopy and one negative sample, assemblages BIV, C, and D were found. Cysts of Giardia were not detected in water samples, but three samples used for vegetable irrigation showed total coliforms above the allowed limit, and Escherichia coli was observed in one sample. G. duodenalis BIV was detected in two samples of Lactuca sativa irrigated with this sample of water. BIV was a common genotype, with 100% similarity, between different sources or hosts (humans, animals and vegetables), and the one most often found in humans. Conclusions/Significance This is the first study in Brazil that reports the connection among humans, dogs and vegetables in the transmission dynamics of G. duodenalis in the same geographic area finding identical assemblage. BIV assemblage was the most frequently observed among these different links in the epidemiological chain. PMID:25761119

  10. Demersal fish assemblages off southern New Zealand in relation to depth and temperature

    NASA Astrophysics Data System (ADS)

    Jacob, W.; McClatchie, S.; Probert, P. K.; Hurst, R. J.

    1998-12-01

    We examined the relationship between demersal fish assemblage and depth, temperature, latitude and longitude off southern New Zealand (46-54°S and 165-180°E) in water depths of 80-787 m. Catch weight data were analysed by two-way indicator analysis (TWIA), groupaverage agglomerative clustering (UPGMA) and Detrended Correspondence Analysis (DCA). The spatial pattern of demersal fish off southern New Zealand conforms to the concept of species groups or fish assemblages related to environmental gradients. Shallow-water assemblages were dominated by species from the families Gempylidae, Squalidae, Triakidae and Moridae, mainly represented by Thyrsites atun, Squalus acanthias, Galeorhinus australis, and Pseudophycis bachus. Deep water assemblages were dominated by Chimaeridae, Argentinidae, Merlucciidae and Macrouridae, mainly represented by Hydrolagus novaezelandiae, Argentina elongata, Macruronus novaezelandiae, and Lepidorhynchus denticulatus. Total catch weight was often dominated by Merlucciidae, Macrouridae and Gempylidae. Fish assemblages were related to discrete ranges of depth (< and >300 m) and temperature (< and >9.5°C), but the range of sediment types was too narrow to show any correlation.

  11. Molluscan assemblages on coral reefs and associated hard substrata in the northern Red Sea

    NASA Astrophysics Data System (ADS)

    Zuschin, M.; Hohenegger, J.; Steininger, F.

    2001-09-01

    Information on spatial variability and distribution patterns of organisms in coral reef environments is necessary to evaluate the increasing anthropogenic disturbance of marine environments (Richmond 1993; Wilkinson 1993; Dayton 1994). Therefore different types of subtidal, reef-associated hard substrata (reef flats, reef slopes, coral carpets, coral patches, rock grounds), each with different coral associations, were investigated to determine the distribution pattern of molluscs and their life habits (feeding strategies and substrate relations). The molluscs were strongly dominated by taxa with distinct relations to corals, and five assemblages were differentiated. The Dendropoma maxima assemblage on reef flats is a discrete entity, strongly dominated by this encrusting and suspension-feeding gastropod. All other assemblages are arranged along a substrate gradient of changing coral associations and potential molluscan habitats. The Coralliophila neritoidea- Barbatia foliata assemblage depends on the presence of Porites and shows a dominance of gastropods feeding on corals and of bivalves associated with living corals. The Chamoidea- Cerithium spp. assemblage on rock grounds is strongly dominated by encrusting bivalves. The Drupella cornus-Pteriidae assemblage occurs on Millepora- Acropora reef slopes and is strongly dominated by bivalves associated with living corals. The Barbatia setigera- Ctenoides annulata assemblage includes a broad variety of taxa, molluscan life habits and bottom types, but occurs mainly on faviid carpets and is transitional among the other three assemblages. A predicted degradation of coral coverage to rock bottoms due to increasing eutrophication and physical damage in the study area (Riegl and Piller 2000) will result in a loss of coral-associated molluscs in favor of bivalve crevice dwellers in dead coral heads and of encrusters on dead hard substrata.

  12. Marine heatwaves and optimal temperatures for microbial assemblage activity.

    PubMed

    Joint, Ian; Smale, Dan A

    2017-02-01

    The response of microbial assemblages to instantaneous temperature change was measured in a seasonal study of the coastal waters of the western English Channel. On 18 occasions between November 1999 and December 2000, bacterial abundance was assessed and temperature responses determined from the incorporation of 3 H leucine, measured in a temperature gradient from 5°C to 38°C. Q 10 values varied, being close to 2 in spring and summer but were >3 in autumn. There was a seasonal pattern in the assemblage optimum temperature (T opt ), which was out of phase with sea surface temperature. In July, highest 3 H-leucine incorporation rates were measured at temperatures that were only 2.8°C greater than ambient sea surface temperature but in winter, T opt was ∼20°C higher than the ambient sea surface temperature. Sea surface temperatures for the adjacent English Channel and Celtic Sea for 1982-2014 have periodically been >3°C higher than climatological mean temperatures. This suggests that discrete periods of anomalously high temperatures might be close to, or exceed, temperatures at which maximum microbial assemblage activity occurs. The frequency and magnitude of marine heatwaves are likely to increase as a consequence of anthropogenic climate change and extreme temperatures may influence the role of bacterial assemblages in biogeochemical processes. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  13. Comparative analysis of different survey methods for monitoring fish assemblages in coastal habitats.

    PubMed

    Baker, Duncan G L; Eddy, Tyler D; McIver, Reba; Schmidt, Allison L; Thériault, Marie-Hélène; Boudreau, Monica; Courtenay, Simon C; Lotze, Heike K

    2016-01-01

    Coastal ecosystems are among the most productive yet increasingly threatened marine ecosystems worldwide. Particularly vegetated habitats, such as eelgrass (Zostera marina) beds, play important roles in providing key spawning, nursery and foraging habitats for a wide range of fauna. To properly assess changes in coastal ecosystems and manage these critical habitats, it is essential to develop sound monitoring programs for foundation species and associated assemblages. Several survey methods exist, thus understanding how different methods perform is important for survey selection. We compared two common methods for surveying macrofaunal assemblages: beach seine netting and underwater visual census (UVC). We also tested whether assemblages in shallow nearshore habitats commonly sampled by beach seines are similar to those of nearby eelgrass beds often sampled by UVC. Among five estuaries along the Southern Gulf of St. Lawrence, Canada, our results suggest that the two survey methods yield comparable results for species richness, diversity and evenness, yet beach seines yield significantly higher abundance and different species composition. However, sampling nearshore assemblages does not represent those in eelgrass beds despite considerable overlap and close proximity. These results have important implications for how and where macrofaunal assemblages are monitored in coastal ecosystems. Ideally, multiple survey methods and locations should be combined to complement each other in assessing the entire assemblage and full range of changes in coastal ecosystems, thereby better informing coastal zone management.

  14. BIRD SPECIES ASSEMBLAGES AS INDICATORS OF BIOLOGICAL INTEGRITY IN GREAT BASIN RANGELAND

    EPA Science Inventory

    The study evaluates the potential for bird species assemblages to serve as indicators of biological integrity of rangelands in the Great Basin in much the same way that fish and invertebrate assemblages have been used as indicators in aquatic environments. Our approach was to ide...

  15. Introduction to historical changes in large river fish assemblages of the Americas

    EPA Science Inventory

    This book’s objective is to document historical changes in the fish assemblages of large American rivers, and to determine patterns in and rationale for those changes. In this chapter, we review pertinent literature on large rivers and fish assemblages worldwide and briefly intr...

  16. Multi-regional synthesis of temporal trends in biotic assemblages in streams and rivers of the continental United States

    USGS Publications Warehouse

    Miller, Matthew P.; Brasher, Anne M.D.; Keenen, Jonathan G.

    2013-01-01

    Biotic assemblages in aquatic ecosystems are excellent integrators and indicators of changing environmental conditions within a watershed. Therefore, temporal changes in abiotic environmental variables often can be inferred from temporal changes in biotic assemblages. Algae, macroinvertebrate, and fish assemblage data were collected from 91 sampling sites in 4 geographic regions (northeastern/north-central, southeastern, south-central, and western), collectively encompassing the continental United States, from 1993 to 2009 as part of the U.S. Geological Survey National Water-Quality Assessment Program. This report uses a multivariate approach to synthesize temporal trends in biotic assemblages and correlations with relevant abiotic parameters as a function of biotic assemblage, geographic region, and land use. Of the three groups of biota, algal assemblages had temporal trends at the greatest percentage of sites. Of the regions, a greater percentage of sites in the northeastern/north-central and western regions had temporal trends in biotic assemblages. In terms of land use, a greater percentage of watersheds draining agricultural, urban, and undeveloped areas had significant temporal changes in biota, as compared to watersheds with mixed use. Correlations between biotic assemblages and abiotic variables indicate that, in general, macroinvertebrate assemblages correlated with water quality and fish assemblages correlated with physical habitat. Taken together, results indicate that there are regional differences in how individual biotic assemblages (algae, macroinvertebrates, and fish) respond to different abiotic drivers of change.

  17. Lions as Bone Accumulators? Paleontological and Ecological Implications of a Modern Bone Assemblage from Olduvai Gorge.

    PubMed

    Arriaza, Mari Carmen; Domínguez-Rodrigo, Manuel; Yravedra, José; Baquedano, Enrique

    2016-01-01

    Analytic models have been developed to reconstruct early hominin behaviour, especially their subsistence patterns, revealed mainly through taphonomic analyses of archaeofaunal assemblages. Taphonomic research is used to discern which agents (carnivores, humans or both) generate the bone assemblages recovered at archaeological sites. Taphonomic frameworks developed during the last decades show that the only large-sized carnivores in African biomes able to create bone assemblages are leopards and hyenas. A carnivore-made bone assemblage located in the short-grassland ecological unit of the Serengeti (within Olduvai Gorge) was studied. Taphonomic analyses of this assemblage including skeletal part representation, bone density, breakage patterns and anatomical distribution of tooth marks, along with an ecological approach to the prey selection made by large carnivores of the Serengeti, were carried out. The results show that this bone assemblage may be the first lion-accumulated assemblage documented, although other carnivores (namely spotted hyenas) may have also intervened through postdepositional ravaging. This first faunal assemblage potentially created by lions constitutes a new framework for neotaphonomic studies. Since lions may accumulate carcasses under exceptional circumstances, such as those documented at the site reported here, this finding may have important consequences for interpretations of early archaeological and paleontological sites, which provide key information about human evolution.

  18. Lions as Bone Accumulators? Paleontological and Ecological Implications of a Modern Bone Assemblage from Olduvai Gorge

    PubMed Central

    Arriaza, Mari Carmen; Domínguez-Rodrigo, Manuel; Yravedra, José; Baquedano, Enrique

    2016-01-01

    Analytic models have been developed to reconstruct early hominin behaviour, especially their subsistence patterns, revealed mainly through taphonomic analyses of archaeofaunal assemblages. Taphonomic research is used to discern which agents (carnivores, humans or both) generate the bone assemblages recovered at archaeological sites. Taphonomic frameworks developed during the last decades show that the only large-sized carnivores in African biomes able to create bone assemblages are leopards and hyenas. A carnivore-made bone assemblage located in the short-grassland ecological unit of the Serengeti (within Olduvai Gorge) was studied. Taphonomic analyses of this assemblage including skeletal part representation, bone density, breakage patterns and anatomical distribution of tooth marks, along with an ecological approach to the prey selection made by large carnivores of the Serengeti, were carried out. The results show that this bone assemblage may be the first lion-accumulated assemblage documented, although other carnivores (namely spotted hyenas) may have also intervened through postdepositional ravaging. This first faunal assemblage potentially created by lions constitutes a new framework for neotaphonomic studies. Since lions may accumulate carcasses under exceptional circumstances, such as those documented at the site reported here, this finding may have important consequences for interpretations of early archaeological and paleontological sites, which provide key information about human evolution. PMID:27144649

  19. On factors structuring the flatfish assemblage in the southern North Sea

    NASA Astrophysics Data System (ADS)

    Piet, G. J.; Pfisterer, A. B.; Rijnsdorp, A. D.

    1998-09-01

    Ten species of flatfish were studied to see to what extent interspecific competition influences their diet or spatial distribution and whether the potential of these flatfish species to avoid interspecific competition through resource partitioning is constrained by specific morphological characteristics. For this, seven morphological characteristics were measured, diet composition was determined from gut content analyses and overlap in distribution was determined from the co-occurrence in trawl hauls. Canonical correspondence analysis revealed the morphological characteristics that were most strongly correlated with the diet composition. Based on these findings the mouth gape was considered to be the most important morphological constraint affecting the choice of food. Two resource dimensions were distinguished along which interspecific competition can act on the flatfish assemblage: the trophic dimension (diet composition) and the spatial dimension (distribution). Resource partitioning was observed along both dimensions separately and, more importantly, the degree of resource partitioning along the two dimensions was negatively correlated. Especially the latter was considered strong circumstantial evidence that interspecific competition is a major factor structuring the flatfish assemblage. Resource partitioning along the two resource dimensions increased with decreasing mouth gape, suggesting that interspecific competition mainly acts on the small-mouthed fish, i.e. juveniles.

  20. ENVIRONMENTAL FACTORS INFLUENCING THE SPATIAL DISTRIBUTION OF DINOFLAGELLATE CYST ASSEMBLAGES IN SHALLOW LAGOONS IN SOUTHERN NEW ENGLAND (USA)

    EPA Science Inventory

    Surface sediment samples from 24 sites within eleven back-barrier lagoons of Rhode Island and Massachusetts (USA) contain abundant (200-6000 cysts cm-3) and diverse (up to 40 taxa) dinoflagellate cyst assemblages. The lowest cyst concentrations and diversity are observed in lagoo...

  1. Differences in stability of seed-associated microbial assemblages in response to invasion by phytopathogenic microorganisms.

    PubMed

    Rezki, Samir; Campion, Claire; Iacomi-Vasilescu, Beatrice; Preveaux, Anne; Toualbia, Youness; Bonneau, Sophie; Briand, Martial; Laurent, Emmanuelle; Hunault, Gilles; Simoneau, Philippe; Jacques, Marie-Agnès; Barret, Matthieu

    2016-01-01

    Seeds are involved in the vertical transmission of microorganisms from one plant generation to another and consequently act as reservoirs for the plant microbiota. However, little is known about the structure of seed-associated microbial assemblages and the regulators of assemblage structure. In this work, we have assessed the response of seed-associated microbial assemblages of Raphanus sativus to invading phytopathogenic agents, the bacterial strain Xanthomonas campestris pv. campestris (Xcc) 8004 and the fungal strain Alternaria brassicicola Abra43. According to the indicators of bacterial (16S rRNA gene and gyrB sequences) and fungal (ITS1) diversity employed in this study, seed transmission of the bacterial strain Xcc 8004 did not change the overall composition of resident microbial assemblages. In contrast seed transmission of Abra43 strongly modified the richness and structure of fungal assemblages without affecting bacterial assemblages. The sensitivity of seed-associated fungal assemblage to Abra43 is mostly related to changes in relative abundance of closely related fungal species that belong to the Alternaria genus. Variation in stability of the seed microbiota in response to Xcc and Abra43 invasions could be explained by differences in seed transmission pathways employed by these micro-organisms, which ultimately results in divergence in spatio-temporal colonization of the seed habitat.

  2. Differences in stability of seed-associated microbial assemblages in response to invasion by phytopathogenic microorganisms

    PubMed Central

    Rezki, Samir; Campion, Claire; Iacomi-Vasilescu, Beatrice; Preveaux, Anne; Toualbia, Youness; Bonneau, Sophie; Briand, Martial; Laurent, Emmanuelle; Hunault, Gilles; Simoneau, Philippe; Jacques, Marie-Agnès

    2016-01-01

    Seeds are involved in the vertical transmission of microorganisms from one plant generation to another and consequently act as reservoirs for the plant microbiota. However, little is known about the structure of seed-associated microbial assemblages and the regulators of assemblage structure. In this work, we have assessed the response of seed-associated microbial assemblages of Raphanus sativus to invading phytopathogenic agents, the bacterial strain Xanthomonas campestris pv. campestris (Xcc) 8004 and the fungal strain Alternaria brassicicola Abra43. According to the indicators of bacterial (16S rRNA gene and gyrB sequences) and fungal (ITS1) diversity employed in this study, seed transmission of the bacterial strain Xcc 8004 did not change the overall composition of resident microbial assemblages. In contrast seed transmission of Abra43 strongly modified the richness and structure of fungal assemblages without affecting bacterial assemblages. The sensitivity of seed-associated fungal assemblage to Abra43 is mostly related to changes in relative abundance of closely related fungal species that belong to the Alternaria genus. Variation in stability of the seed microbiota in response to Xcc and Abra43 invasions could be explained by differences in seed transmission pathways employed by these micro-organisms, which ultimately results in divergence in spatio-temporal colonization of the seed habitat. PMID:27077013

  3. Temporal patterns of diversity: Assessing the biotic and abiotic controls on ant assemblages

    USGS Publications Warehouse

    Dunn, R.R.; Parker, C.R.; Sanders, N.J.

    2007-01-01

    In this study, we use 12 months of data from 11 ant assemblages to test whether seasonal variation in ant diversity is governed by either the structuring influences of interspecific competition or environmental conditions. Because the importance of competition might vary along environmental gradients, we also test whether the signature of competition depends on elevation. We find little evidence that competition structures the seasonal patterns of activity in the ant assemblages considered, but find support for the effects of temperature on seasonal patterns of diversity, especially at low-elevation sites. Although, in general, both competition and the environment interact to structure ant assemblages, our results suggest that environmental conditions are the primary force structuring the seasonal activity of the ant assemblages studied here. ?? 2007 The Linnean Society of London.

  4. Spatially dependent responses of a large-river fish assemblage to bank stabilization and side channels

    USGS Publications Warehouse

    Reinhold, Ann Marie; Bramblett, Robert G.; Zale, Alexander V.; Poole, Geoffrey C.; Roberts, David W.

    2017-01-01

    The alteration of rivers by anthropogenic bank stabilization to prevent the erosion of economically valuable lands and structures has become commonplace. However, such alteration has ambiguous consequences for fish assemblages, especially in large rivers. Because most large, temperate rivers have impoundments, it can be difficult to separate the influences of bank stabilization structures from those of main-stem impoundments, especially because both stabilization structures and impoundments can cause side-channel loss. Few large rivers are free flowing and retain extensive side channels, but the Yellowstone River (our study area) is one such river. We hypothesized that in this river (1) bank stabilization has changed fish assemblage structure by altering habitats, (2) side-channel availability has influenced fish assemblage structure by providing habitat heterogeneity, and (3) the influences of bank stabilization and side channels on fish assemblages were spatially scale dependent. We developed a spatially explicit framework to test these hypotheses. Fish assemblage structure varied with the extent of bank stabilization and the availability of side channels; however, not all assemblage subsets were influenced. Nevertheless, bank stabilization and side channels had different and sometimes opposite influences on the fish assemblage. The effects of side channels on fish were more consistent and widespread than those of bank stabilization; the catches of more fishes were positively correlated with side-channel availability than with the extent of bank stabilization. The influences of bank stabilization and side channels on the relative abundances of fish also varied, depending on species and river bend geomorphology. The variation in river morphology probably contributed to the assemblage differences between stabilized and reference river bends; stabilized alluvial pools were deeper than reference alluvial pools, but the depths of stabilized and reference bluff pools

  5. Magmatic-vapor expansion and the formation of high-sulfidation gold deposits: Structural controls on hydrothermal alteration and ore mineralization

    USGS Publications Warehouse

    Berger, Byron R.; Henley, Richard W.

    2011-01-01

    High-sulfidation copper–gold lode deposits such as Chinkuashih, Taiwan, Lepanto, Philippines, and Goldfield, Nevada, formed within 1500 m of the paleosurface in volcanic terranes. All underwent an early stage of extensive advanced argillic silica–alunite alteration followed by an abrupt change to spatially much more restricted stages of fracture-controlled sulfide–sulfosalt mineral assemblages and gold–silver mineralization. The alteration as well as ore mineralization stages of these deposits were controlled by the dynamics and history of syn-hydrothermal faulting.At the Sulfate Stage, aggressive advanced argillic alteration and silicification were consequent on the in situ formation of acidic condensate from magmatic vapor as it expanded through secondary fracture networks alongside active faults. The reduction of permeability at this stage due to alteration decreased fluid flow to the surface, and progressively developed a barrier between magmatic-vapor expansion constrained by the active faults and peripheral hydrothermal activity dominated by hot-water flow. In conjunction with the increased rock strength resulting from alteration, subsequent fault-slip inversion in response to an increase in compressional stress generated new, highly permeable fractures localized by the embrittled, altered rock. The new fractures focused magmatic-vapor expansion with much lower heat loss so that condensation occurred. Sulfide Stage sulfosalt, sulfide, and gold–silver deposition then resulted from destabilization of vapor phase metal species due to vapor decompression through the new fracture array. The switch from sulfate to sulfide assemblages is, therefore, a logical consequence of changes in structural permeability due to the coupling of alteration and fracture dynamics rather than to changes in the chemistry of the fluid phase at its magmatic source.

  6. Hydrothermal Mineral Deposits From a Young (0.1Ma) Abyssal Hill on the Flank of the Fast-Spreading East Pacific Rise

    NASA Astrophysics Data System (ADS)

    Benjamin, S. B.; Haymon, R. M.

    2004-12-01

    It has been estimated from heat flow measurements that at least 40% of the total hydrothermal heat lost from oceanic lithosphere is removed from 0.1-5 Ma abyssal hill terrain on mid-ocean ridge flanks. Despite the large magnitude of estimated hydrothermal heat loss from young abyssal hills, little is known about characteristics of hydrothermal vents and mineral deposits in this setting. This study describes the first abyssal hill hydrothermal samples to be collected on the flank of a fast-spreading ridge. The mineral deposits were discovered at "Tevnia Site" on the axis-facing fault scarp of an abyssal hill, located on ˜0.1 Ma lithosphere ˜5 km east of the East Pacific Rise (EPR) axis at 10\\deg 20'N. Observations of Galatheid crabs, "dandelion" siphonophores, and colonies of dead, yet still intact, Tevnia worm tubes at this site during Alvin dives in 1994 suggests relatively recent hydrothermal activity. The deposits are friable hydrothermal precipitates incorporating volcanic clasts brecciated at both the micro and macro scales. The petrographic sequence of brecciation, alteration, and cementation exhibited by the samples suggests that they formed from many pulses of hydrothermal venting interspersed with, and perhaps triggered by, repeated tectonic events as the abyssal hill was uplifted and moved off-axis (see also Haymon et al., this session). Observed minerals include x-ray amorphous opaline silica and Fe-oxide phases, crystalline Mn-oxides (birnessite and todorokite), an irregularly stratified mixed layer nontronite-celadonite, and residual calcite in sediment-derived microfossils incorporated into the breccia matrix. This mineral assemblage suggests that the deposits precipitated from moderately low-temperature (<140\\deg C) fluids, enriched in K, Fe, Si, and Mn, with a near-neutral pH. The presence of tubeworm casings at the site is evidence that the hydrothermal fluids carried H2S, however no metal sulfide phases were identified in the samples. Although

  7. Assessing effects of stocked trout on nongame fish assemblages in southern Appalachian Mountain streams

    USGS Publications Warehouse

    Weaver, D.; Kwak, Thomas J.

    2013-01-01

    Fisheries managers are faced with the challenge of balancing the management of recreational fisheries with that of conserving native species and preserving ecological integrity. The negative effects that nonnative trout species exert on native trout are well documented and include alteration of competitive interactions, habitat use, and production. However, the effects that nonnative trout may exert on nongame fish assemblages are poorly understood. Our objectives were to quantify the effects of trout stocking on native nongame fish assemblages intensively on one newly stocked river, the North Toe River, North Carolina, and extensively on other southern Appalachian Mountain streams that are annually stocked with trout. In the intensive study, we adopted a before-after, control-impact (BACI) experimental design to detect short-term effects on the nongame fish assemblage and found no significant differences in fish density, species richness, species diversity, or fish microhabitat use associated with trout stocking. We observed differences in fish microhabitat use between years, however, which suggests there is a response to environmental changes, such as the flow regime, which influence available habitat. In the extensive study, we sampled paired stocked and unstocked stream reaches to detect long-term effects from trout stocking; however, we detected no differences in nongame fish density, species richness, species diversity, or population size structure between paired sites. Our results revealed high inherent system variation caused by natural and anthropogenic factors that appear to overwhelm any acute or chronic effect of stocked trout. Furthermore, hatchery-reared trout may be poor competitors in a natural setting and exert a minimal or undetectable impact on native fish assemblages in these streams. These findings provide quantitative results necessary to assist agencies in strategic planning and decision making associated with trout fisheries, stream

  8. Geochemistry and provenance of some detrital heavy minerals of alluvial sediments from Neagra Şarului River, Eastern Carpathians, Romania

    NASA Astrophysics Data System (ADS)

    Ciortescu, Catalina; Iancu, Ovidiu Gabriel; Bulgariu, Dumitru; Popa, Ciprian

    2014-05-01

    The present work focuses on the analyses of a selection of heavy mineral assemblages sampled from the Neagra Şarului River's alluvia, in order to determine their provenance and distribution, using their geochemical and physical characteristics. The study focused on a mountain river of about 30 km long, located in the north-western part of the Eastern Carpathians, an important tributary of the Bistria River. The bedrocks in the river drainage basin are constituted mainly by igneous rocks from Călimani Volcanic Complex in the west, and secondarily by a small area of low to medium grade metamorphic rocks, part of Crystalline-Mesozoic Zone, in the east. In order to trace the source of each individual mineral species, we prepared our samples via field separation and subsequent laboratory sieving using 8 different size fractions. An electromagnetic separator (Frantz Isodynamic) was used to separate and classify each heavy minerals species, depending on their magnetic susceptibility. Thus prepared, more than 500 grains per samples (from the 0.5-1 mm size fraction) were mounted on thin sections and analyzed using a Cambridge Microscan M9 with EDS system. These analyses served for mineral identification and relative abundance determination. The classification of the minerals and the nature of their inclusions are derived from the major element compositions computed from SEM-EDX analysis. We also used a stereo microscope in order to determine complementary properties of the grains, such as: color, degree of roundness and degree of alteration. In order of abundance, the main heavy minerals are magnetite, hematite, pyroxene, pyrite, manganese oxides, garnet, apatite, titanium oxides (ilmenite, titanite and rutile/anatase), chlorite, olivine, epidote, biotite and rhodochrosite. A particularity of the studied area is the presence of an altered magnetite caused first by the hydrothermal alteration and strong weathering of the source rocks and second by the river's acid water

  9. The distribution and composition of REE-bearing minerals in placers of the Atlantic and Gulf coastal plains, USA

    USGS Publications Warehouse

    Bern, Carleton R.; Shah, Anjana K.; Benzel, William M.; Lowers, Heather A.

    2016-01-01

    Rare earth element (REE) resources are currently of great interest because of their importance as raw materials for high-technology manufacturing. The REE-phosphates monazite (light REE enriched) and xenotime (heavy REE enriched) resist weathering and can accumulate in placer deposits as part of the heavy mineral assemblage. The Atlantic and Gulf coastal plains of the southeastern United States are known to host heavy mineral deposits with economic concentrations of zircon, ilmenite and rutile. This study provides a perspective on the distribution and composition of REE phosphate minerals in the region. The elemental chemistry and mineralogy of sands and associated heavy-mineral assemblages from new and archived sediment samples across the coastal plains are examined, along with phase-specific compositions of monazite, xenotime and zircon. Both monazite and xenotime are present across the coastal plains. The phase-specific compositions allow monazite content to be estimated using La as a geochemical proxy. Similarly, both Y and Yb are geochemical proxies for xenotime, but their additional presence in zircon and monazite require a correction to prevent overestimation of xenotime content. Applying this correction, maps of monazite and xenotime content across the coastal plains were generated using sample coverage from the National Geochemical Database (NGS) and National Uranium Resource Evaluation (NURE). The NGS and NURE approach of sampling stream sediments in small watersheds links samples to nearby lithologies. The results show an approximately 40 km-wide band of primarily Cretaceous, marine sediments bordering the Piedmont province from North Carolina to Alabama in which monazite and xenotime content are relatively high (up to 4.4 wt. % in < 150 μm bulk sediment). Strong correlations between concentrations of the two phases were found, with estimated monazite:xenotime ratios ranging approximately 6:1 to 12:1 depending upon the dataset analyzed. From a resource

  10. Effects of management legacies on stream fish and aquatic benthic macroinvertebrate assemblages

    USGS Publications Warehouse

    Quist, Michael C.; Schultz, Randall D.

    2014-01-01

    Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002–2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence–absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat

  11. Effects of Management Legacies on Stream Fish and Aquatic Benthic Macroinvertebrate Assemblages

    NASA Astrophysics Data System (ADS)

    Quist, Michael C.; Schultz, Randall D.

    2014-09-01

    Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002-2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence-absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly

  12. Effects of management legacies on stream fish and aquatic benthic macroinvertebrate assemblages.

    PubMed

    Quist, Michael C; Schultz, Randall D

    2014-09-01

    Fish and benthic macroinvertebrate assemblages often provide insight on ecological conditions for guiding management actions. Unfortunately, land use and management legacies can constrain the structure of biotic communities such that they fail to reflect habitat quality. The purpose of this study was to describe patterns in fish and benthic macroinvertebrate assemblage structure, and evaluate relationships between biota and habitat characteristics in the Chariton River system of south-central Iowa, a system likely influenced by various potential management legacies (e.g., dams, chemical removal of fishes). We sampled fishes, benthic macroinvertebrates, and physical habitat from a total of 38 stream reaches in the Chariton River watershed during 2002-2005. Fish and benthic macroinvertebrate assemblages were dominated by generalist species tolerant of poor habitat quality; assemblages failed to show any apparent patterns with regard to stream size or longitudinal location within the watershed. Metrics used to summarize fish assemblages and populations [e.g., presence-absence, relative abundance, Index of Biotic Integrity for fish (IBIF)] were not related to habitat characteristics, except that catch rates of piscivores were positively related to the depth and the amount of large wood. In contrast, family richness of benthic macroinvertebrates, richness of Ephemeroptera, Trichoptera, and Plecoptera taxa, and IBI values for benthic macroinvertebrates (IBIBM) were positively correlated with the amount of overhanging vegetation and inversely related to the percentage of fine substrate. A long history of habitat alteration by row-crop agriculture and management legacies associated with reservoir construction has likely resulted in a fish assemblage dominated by tolerant species. Intolerant and sensitive fish species have not recolonized streams due to downstream movement barriers (i.e., dams). In contrast, aquatic insect assemblages reflected aquatic habitat, particularly

  13. Seafloor massive sulfide deposits support unique megafaunal assemblages: Implications for seabed mining and conservation.

    PubMed

    Boschen, Rachel E; Rowden, Ashley A; Clark, Malcolm R; Pallentin, Arne; Gardner, Jonathan P A

    2016-04-01

    Mining of seafloor massive sulfides (SMS) is imminent, but the ecology of assemblages at SMS deposits is poorly known. Proposed conservation strategies include protected areas to preserve biodiversity at risk from mining impacts. Determining site suitability requires biological characterisation of the mine site and protected area(s). Video survey of a proposed mine site and protected area off New Zealand revealed unique megafaunal assemblages at the mine site. Significant relationships were identified between assemblage structure and environmental conditions, including hydrothermal features. Unique assemblages occurred at both active and inactive chimneys and are particularly at risk from mining-related impacts. The occurrence of unique assemblages at the mine site suggests that the proposed protected area is insufficient alone and should instead form part of a network. These results provide support for including hydrothermally active and inactive features within networks of protected areas and emphasise the need for quantitative survey data of proposed sites. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.

  14. The role of depth in regulating water quality and fish assemblages in oxbow lakes

    USGS Publications Warehouse

    Goetz, Daniel B.; Miranda, Leandro E.; Kroger, Robert; Andrews, Caroline S.

    2015-01-01

    We evaluated water quality and fish assemblages in deep (> 3.0 m; N = 7) and shallow (< 1.5 m; N = 6) floodplain lakes in the intensively cultivated Yazoo River Basin (Mississippi, USA) using indirect gradient multivariate procedures. Shallow lakes displayed wide diel oxygen fluctuations, some reaching hypoxic/anoxic conditions for extended periods of time, high suspended solids, and extreme water temperatures. Conversely, deeper lakes were represented by higher visibility, stable oxygen levels, and cooler water temperatures. Fish assemblages in shallow lakes were dominated by tolerant, small-bodied fishes and those able to breathe atmospheric oxygen. Deeper lakes had a greater representation of predators and other large-bodied fishes. Our evaluation suggests fish assemblages are reflective of oxbow lakes water quality, which is shaped by depth. Understanding the interactions between depth, water quality, and fish assemblages may facilitate development of effective management plans for improving conditions necessary to sustain diverse fish assemblages in agriculturally dominated basins.

  15. The relative importance of regional, local, and evolutionary factors structuring cryptobenthic coral-reef assemblages

    NASA Astrophysics Data System (ADS)

    Ahmadia, Gabby N.; Tornabene, Luke; Smith, David J.; Pezold, Frank L.

    2018-03-01

    Factors shaping coral-reef fish species assemblages can operate over a wide range of spatial scales (local versus regional) and across both proximate and evolutionary time. Niche theory and neutral theory provide frameworks for testing assumptions and generating insights about the importance of local versus regional processes. Niche theory postulates that species assemblages are an outcome of evolutionary processes at regional scales followed by local-scale interactions, whereas neutral theory presumes that species assemblages are formed by largely random processes drawing from regional species pools. Indo-Pacific cryptobenthic coral-reef fishes are highly evolved, ecologically diverse, temporally responsive, and situated on a natural longitudinal diversity gradient, making them an ideal group for testing predictions from niche and neutral theories and effects of regional and local processes on species assemblages. Using a combination of ecological metrics (fish density, diversity, assemblage composition) and evolutionary analyses (testing for phylogenetic niche conservatism), we demonstrate that the structure of cryptobenthic fish assemblages can be explained by a mixture of regional factors, such as the size of regional species pools and broad-scale barriers to gene flow/drivers of speciation, coupled with local-scale factors, such as the relative abundance of specific microhabitat types. Furthermore, species of cryptobenthic fishes have distinct microhabitat associations that drive significant differences in assemblage community structure between microhabitat types, and these distinct microhabitat associations are phylogenetically conserved over evolutionary timescales. The implied differential fitness of cryptobenthic fishes across varied microhabitats and the conserved nature of their ecology are consistent with predictions from niche theory. Neutral theory predictions may still hold true for early life-history stages, where stochastic factors may be more

  16. Mineral Surface Rearrangement at High Temperatures: Implications for Extraterrestrial Mineral Grain Reactivity.

    PubMed

    King, Helen E; Plümper, Oliver; Putnis, Christine V; O'Neill, Hugh St C; Klemme, Stephan; Putnis, Andrew

    2017-04-20

    Mineral surfaces play a critical role in the solar nebula as a catalytic surface for chemical reactions and potentially acted as a source of water during Earth's accretion by the adsorption of water molecules to the surface of interplanetary dust particles. However, nothing is known about how mineral surfaces respond to short-lived thermal fluctuations that are below the melting temperature of the mineral. Here we show that mineral surfaces react and rearrange within minutes to changes in their local environment despite being far below their melting temperature. Polished surfaces of the rock and planetary dust-forming silicate mineral olivine ((Mg,Fe) 2 SiO 4 ) show significant surface reorganization textures upon rapid heating resulting in surface features up to 40 nm in height observed after annealing at 1200 °C. Thus, high-temperature fluctuations should provide new and highly reactive sites for chemical reactions on nebula mineral particles. Our results also may help to explain discrepancies between short and long diffusion profiles in experiments where diffusion length scales are of the order of 100 nm or less.

  17. Pegmatite/wallrock interactions, Black Hills, South Dakota: Progressive boron metasomatism adjacent to the Tip Top pegmatite

    NASA Astrophysics Data System (ADS)

    Shearer, C. K.; Papike, J. J.; Simon, S. B.; Laul, J. C.; Christian, R. P.

    1984-12-01

    Interaction between country rock and fluids derived from the Tip Top pegmatite has resulted in a series of boron enriched assemblages. Between unaltered quartz-mica schist to the pegmatite contact is a succession of four mineral assemblages: (1) Quartz-Biotite-Potassium Feldspar assemblage (Q-B-K), which consists essentially of the original metamorphic silicate assemblage plus anomalously high amounts of modal tourmaline (2) Quartz-Biotite-Tourmaline assemblage (Q-B-T) (3) Tourmaline-Quartz-Muscovite assemblage (T-Q-M) (4) Tourmaline-Quartz assemblage (T-Q). Alkali elements (Cs, Rb, K, Li), SiO 2, and Ba show a decrease from the Q-B-K assemblage to the T-Q assemblage. A1 2O 3, Ga, B, total Fe and Zn increase moderately from the Q-B-K assemblage to the T-Q assemblage. The mineral chemistries also change considerably. The Mg/(Mg + Fe 2+) ratios in biotites range from 0.54 to 0.50 in samples from the Q-B-K assemblage to 0.39 in the (Q-B-T) assemblage. The range in tourmaline end-member components from the Q-B-K assemblage to the T-Q assemblage is as follows: Q-B-K: Dravite .63 Schorl .23 Elbaite .05 Buergerite .09 T-Q: Dravite .23 Schorl .37 Elbaite .17 Buergerite .23. Observed variations in mineral assemblage and whole rock chemistry within the alteration zone appear to a first approximation to be a function of μB2O3 (boron metasomatism) and μK2O (alkali leaching). The breakdown of feldspar and biotite may be approximated by reactions: 2HCl + 2(K, Na)AlSi 3O 8 /ai 2(K, Na)Cl + Al 2SiO 5 + 5SiO 2 + H 2O and 2 Annite + SiO 2 + 5Al 2SiO 5 + 2NaCl + 6H 3BO 3 /ai 2 Tourmaline + 2KCl + 7H 2O. The alteration zone may represent either a single episode (B-, Cs-, Li-, Rb-enriched fluid) or multiple episodes (B, Zn, Mn fluid and Cs, Li, Rb fluid) of pegmatite fluid-schist interactions. In both situations, B in the aqueous fluid from the pegmatite reacts with the schist breaking down sheet silicate "traps" for Cs, Rb, Li, and K and forming tourmaline-rich assemblages.

  18. Pegmatite/wallrock interactions, Black Hills, South Dakota: Progressive boron metasomatism adjacent to the Tip Top pegmatite

    USGS Publications Warehouse

    Shearer, C.K.; Papike, J.J.; Simon, S.B.; Laul, J.C.; Christian, R.P.

    1984-01-01

    Interaction between country rock and fluids derived from the Tip Top pegmatite has resulted in a series of boron enriched assemblages. Between unaltered quartz-mica schist to the pegmatite contact is a succession of four mineral assemblages: 1. (1) Quartz-Biotite-Potassium Feldspar assemblage (Q-B-K), which consists essentially of the original metamorphic silicate assemblage plus anomalously high amounts of modal tourmaline 2. (2) Quartz-Biotite-Tourmaline assemblage (Q-B-T) 3. (3) Tourmaline-Quartz-Muscovite assemblage (T-Q-M) 4. (4) Tourmaline-Quartz assemblage (T-Q). Alkali elements (Cs, Rb, K, Li), SiO2, and Ba show a decrease from the Q-B-K assemblage to the T-Q assemblage. A12O3, Ga, B, total Fe and Zn increase moderately from the Q-B-K assemblage to the T-Q assemblage. The mineral chemistries also change considerably. The Mg/(Mg + Fe2+) ratios in biotites range from 0.54 to 0.50 in samples from the Q-B-K assemblage to 0.39 in the (Q-B-T) assemblage. The range in tourmaline end-member components from the Q-B-K assemblage to the T-Q assemblage is as follows: Q-B-K: Dravite.63 Schorl.23 Elbaite.05 Buergerite.09 T-Q: Dravite.23 Schorl.37 Elbaite.17 Buergerite.23. Observed variations in mineral assemblage and whole rock chemistry within the alteration zone appear to a first approximation to be a function of ??B2O3 (boron metasomatism) and ??K2O (alkali leaching). The breakdown of feldspar and biotite may be approximated by reactions: 2HCl + 2(K, Na)AlSi3O8 /ai 2(K, Na)Cl + Al2SiO5 + 5SiO2 + H2O and 2 Annite + SiO2 + 5Al2SiO5 + 2NaCl + 6H3BO3 /ai 2 Tourmaline + 2KCl + 7H2O. The alteration zone may represent either a single episode (B-, Cs-, Li-, Rb-enriched fluid) or multiple episodes (B, Zn, Mn fluid and Cs, Li, Rb fluid) of pegmatite fluid-schist interactions. In both situations, B in the aqueous fluid from the pegmatite reacts with the schist breaking down sheet silicate "traps" for Cs, Rb, Li, and K and forming tourmaline-rich assemblages. ?? 1984.

  19. An empirical, hierarchical typology of tree species assemblages for assessing forest dynamics under global change scenarios

    PubMed Central

    Coulston, John W.; Wear, David N.

    2017-01-01

    The composition of tree species occurring in a forest is important and can be affected by global change drivers such as climate change. To inform assessment and projection of global change impacts at broad extents, we used hierarchical cluster analysis and over 120,000 recent forest inventory plots to empirically define forest tree assemblages across the U.S., and identified the indicator and dominant species associated with each. Cluster typologies in two levels of a hierarchy of forest assemblages, with 29 and 147 groups respectively, were supported by diagnostic criteria. Groups in these two levels of the hierarchy were labeled based on the top indicator species in each, and ranged widely in size. For example, in the 29-cluster typology, the sugar maple-red maple assemblage contained the largest number of plots (30,068), while the butternut-sweet birch and sourwood-scarlet oak assemblages were both smallest (6 plots each). We provide a case-study demonstration of the utility of the typology for informing forest climate change impact assessment. For five assemblages in the 29-cluster typology, we used existing projections of changes in importance value (IV) for the dominant species under one low and one high climate change scenario to assess impacts to the assemblages. Results ranged widely for each scenario by the end of the century, with each showing an average decrease in IV for dominant species in some assemblages, including the balsam fir-quaking aspen assemblage, and an average increase for others, like the green ash-American elm assemblage. Future work should assess adaptive capacity of these forest assemblages and investigate local population- and community-level dynamics in places where dominant species may be impacted. This typology will be ideal for monitoring, assessing, and projecting changes to forest communities within the emerging framework of macrosystems ecology, which emphasizes hierarchies and broad extents. PMID:28877258

  20. Fish assemblages in oxbow lakes relative to connectivity with the Mississippi River

    USGS Publications Warehouse

    Miranda, L.E.

    2005-01-01

    The alluvial valley of the lower Mississippi River contains hundreds of fluvial lakes that are periodically connected to the river during high water, although the frequency, duration, and timing of the connections vary. To help design plans to restore and preserve fish assemblages in these alluvial lakes, this investigation tested whether predictable patterns in lake fish assemblages were linked to the level of connectivity with the river. Results suggested that connectivity played an important role in structuring fish assemblages and that it was correlated with variables such as lake size, depth, distance from the river, and age, which exhibit a continuum of predictable features as the river migrates away from abandoned channels. Annual floods homogenize the floodplain and promote connectivity to various degrees, allowing for fish exchanges between river and floodplain that directly affect fish assemblages. The major physical changes linked to reduced connectivity are loss of depth and area, which in turn affect a multiplicity of abiotic and biotic features that indirectly affect community structure. In advanced stages of disconnection, fish assemblages in oxbow lakes are expected to include largely species that thrive in turbid, shallow systems with few predators and low oxygen content. When the river flowed without artificial restraint, oxbow lakes were created at the rate of 13-15 per century. At present, no or few oxbow lakes are being formed, and as existing lakes age, they are becoming shallower, smaller, and progressively more disconnected from the river. Given that modifications to the Mississippi River appear to be irreversible, conservation of this resource requires maintenance of existing lakes at a wide range of aging phases that provide diverse habitats and harbor distinct species assemblages.

  1. Tropical insular fish assemblages are resilient to flood disturbance

    USGS Publications Warehouse

    Smith, William E.; Kwak, Thomas J.

    2015-01-01

    Periods of stable environmental conditions, favoring development of ecological communities regulated by density-dependent processes, are interrupted by random periods of disturbance that may restructure communities. Disturbance may affect populations via habitat alteration, mortality, or displacement. We quantified fish habitat conditions, density, and movement before and after a major flood disturbance in a Caribbean island tropical river using habitat surveys, fish sampling and population estimates, radio telemetry, and passively monitored PIT tags. Native stream fish populations showed evidence of acute mortality and downstream displacement of surviving fish. All fish species were reduced in number at most life stages after the disturbance, but populations responded with recruitment and migration into vacated upstream habitats. Changes in density were uneven among size classes for most species, indicating altered size structures. Rapid recovery processes at the population level appeared to dampen effects at the assemblage level, as fish assemblage parameters (species richness and diversity) were unchanged by the flooding. The native fish assemblage appeared resilient to flood disturbance, rapidly compensating for mortality and displacement with increased recruitment and recolonization of upstream habitats.

  2. Effects of reconstruction of a pre-European vertebrate assemblage on ground-dwelling arachnids in arid Australia.

    PubMed

    Silvey, Colin J; Hayward, Matthew W; Gibb, Heloise

    2015-06-01

    Species loss can result in changes in assemblage structure and ecosystem function through ecological cascades. Australian vertebrate assemblages changed significantly following European colonisation, which resulted in the establishment of invasive vertebrates and the loss of native marsupials, many of which consume invertebrates. Conservation focusses on the removal of invasive carnivores and the reintroduction of regionally extinct species to fenced sites, resulting in what could be considered a reconstruction of pre-European vertebrate assemblages. In semi-arid Australian spinifex mallee ecosystems, we asked: (1) what is the effect of reconstructed pre-European vertebrate assemblages on native arachnid assemblages? and (2) what direct or indirect mechanisms (predation, disturbance and/or competition) could plausibly be responsible for these effects? We compared sites with reconstructed vertebrate assemblages with paired control sites. Arachnids were sampled using pitfall trapping and direct searching. Hypotheses regarding mechanisms were tested using scat analysis (predation) and by comparing burrow depth (disturbance) and scorpion mass (competition) between control and reconstructed sites. The dominant dune scorpion, Urodacus yaschenkoi, was less abundant and a wolf spider (Lycosa gibsoni species group) more abundant in reconstructed sites. Differences in spider assemblage composition were marginally non-significant. Scat analysis confirmed native vertebrate predation on scorpions and we found no evidence that competition or disturbance affected scorpions. We, thus, suggest that changes in spider assemblages may have resulted from ecological cascades via decreases in dune scorpions. The loss of omnivorous mammals and other changes associated with the invasion of carnivores may, therefore, have had broad-reaching consequences for native arachnid assemblages in Australian ecosystems.

  3. Movers and Stayers: Novel Assemblages in Changing Environments.

    PubMed

    Hobbs, Richard J; Valentine, Leonie E; Standish, Rachel J; Jackson, Stephen T

    2018-02-01

    Increased attention to species movement in response to environmental change highlights the need to consider changes in species distributions and altered biological assemblages. Such changes are well known from paleoecological studies, but have accelerated with ongoing pervasive human influence. In addition to species that move, some species will stay put, leading to an array of novel interactions. Species show a variety of responses that can allow movement or persistence. Conservation and restoration actions have traditionally focused on maintaining or returning species in particular places, but increasingly also include interventions that facilitate movement. Approaches are required that incorporate the fluidity of biotic assemblages into the goals set and interventions deployed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  4. Fish assemblages of the upper Little Sioux River basin, Iowa, USA: Relationships with stream size and comparison with historical assemblages

    USGS Publications Warehouse

    Palic, D.; Helland, L.; Pedersen, B.R.; Pribil, J.R.; Grajeda, R.M.; Loan-Wilsey, Anna; Pierce, C.L.

    2007-01-01

    We characterized the fish assemblages in second to fifth order streams of the upper Little Sioux River basin in northwest Iowa, USA and compared our results with historical surveys. The fish assemblage consisted of over twenty species, was dominated numerically by creek chub, sand shiner, central stoneroller and other cyprinids, and was dominated in biomass by common carp. Most of the species and the great majority of all individuals present were at least moderately tolerant to environmental degradation, and biotic integrity at most sites was characterized as fair. Biotic integrity declined with increasing stream size, and degraded habitat in larger streams is a possible cause. No significant changes in species richness or the relative distribution of species' tolerance appear to have occurred since the 1930s.

  5. Characteristics, extent and origin of hydrothermal alteration at Mount Rainier Volcano, Cascades Arc, USA: Implications for debris-flow hazards and mineral deposits

    USGS Publications Warehouse

    John, D.A.; Sisson, T.W.; Breit, G.N.; Rye, R.O.; Vallance, J.W.

    2008-01-01

    Hydrothermal alteration at Mount Rainier waxed and waned over the 500,000-year episodic growth of the edifice. Hydrothermal minerals and their stable-isotope compositions in samples collected from outcrop and as clasts from Holocene debris-flow deposits identify three distinct hypogene argillic/advanced argillic hydrothermal environments: magmatic-hydrothermal, steam-heated, and magmatic steam (fumarolic), with minor superimposed supergene alteration. The 3.8??km3 Osceola Mudflow (5600??y BP) and coeval phreatomagmatic F tephra contain the highest temperature and most deeply formed hydrothermal minerals. Relatively deeply formed magmatic-hydrothermal alteration minerals and associations in clasts include quartz (residual silica), quartz-alunite, quartz-topaz, quartz-pyrophyllite, quartz-dickite/kaolinite, and quartz-illite (all with pyrite). Clasts of smectite-pyrite and steam-heated opal-alunite-kaolinite are also common in the Osceola Mudflow. In contrast, the Paradise lahar, formed by collapse of the summit or near-summit of the edifice at about the same time, contains only smectite-pyrite and near-surface steam-heated and fumarolic alteration minerals. Younger debris-flow deposits on the west side of the volcano (Round Pass and distal Electron Mudflows) contain only low-temperature smectite-pyrite assemblages, whereas the proximal Electron Mudflow and a < 100??y BP rock avalanche on Tahoma Glacier also contain magmatic-hydrothermal alteration minerals that are exposed in the avalanche headwall of Sunset Amphitheater, reflecting progressive incision into deeper near-conduit alteration products that formed at higher temperatures. The pre-Osceola Mudflow alteration geometry is inferred to have consisted of a narrow feeder zone of intense magmatic-hydrothermal alteration limited to near the conduit of the volcano, which graded outward to more widely distributed, but weak, smectite-pyrite alteration within 1??km of the edifice axis, developed chiefly in porous

  6. Environmental variables measured at multiple spatial scales exert uneven influence on fish assemblages of floodplain lakes

    USGS Publications Warehouse

    Dembkowski, Daniel J.; Miranda, Leandro E.

    2014-01-01

    We examined the interaction between environmental variables measured at three different scales (i.e., landscape, lake, and in-lake) and fish assemblage descriptors across a range of over 50 floodplain lakes in the Mississippi Alluvial Valley of Mississippi and Arkansas. Our goal was to identify important local- and landscape-level determinants of fish assemblage structure. Relationships between fish assemblage structure and variables measured at broader scales (i.e., landscape-level and lake-level) were hypothesized to be stronger than relationships with variables measured at finer scales (i.e., in-lake variables). Results suggest that fish assemblage structure in floodplain lakes was influenced by variables operating on three different scales. However, and contrary to expectations, canonical correlations between in-lake environmental characteristics and fish assemblage structure were generally stronger than correlations between landscape-level and lake-level variables and fish assemblage structure, suggesting a hierarchy of influence. From a resource management perspective, our study suggests that landscape-level and lake-level variables may be manipulated for conservation or restoration purposes, and in-lake variables and fish assemblage structure may be used to monitor the success of such efforts.

  7. Uniform functional structure across spatial scales in an intertidal benthic assemblage.

    PubMed

    Barnes, R S K; Hamylton, Sarah

    2015-05-01

    To investigate the causes of the remarkable similarity of emergent assemblage properties that has been demonstrated across disparate intertidal seagrass sites and assemblages, this study examined whether their emergent functional-group metrics are scale related by testing the null hypothesis that functional diversity and the suite of dominant functional groups in seagrass-associated macrofauna are robust structural features of such assemblages and do not vary spatially across nested scales within a 0.4 ha area. This was carried out via a lattice of 64 spatially referenced stations. Although densities of individual components were patchily dispersed across the locality, rank orders of importance of the 14 functional groups present, their overall functional diversity and evenness, and the proportions of the total individuals contained within each showed, in contrast, statistically significant spatial uniformity, even at areal scales <2 m(2). Analysis of the proportional importance of the functional groups in their geospatial context also revealed weaker than expected levels of spatial autocorrelation, and then only at the smaller scales and amongst the most dominant groups, and only a small number of negative correlations occurred between the proportional importances of the individual groups. In effect, such patterning was a surface veneer overlying remarkable stability of assemblage functional composition across all spatial scales. Although assemblage species composition is known to be homogeneous in some soft-sediment marine systems over equivalent scales, this combination of patchy individual components yet basically constant functional-group structure seems as yet unreported. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Decadal-scale changes in benthic foraminiferal assemblages off Key Largo, Florida

    USGS Publications Warehouse

    Cockey, E.; Hallock, P.; Lidz, B.H.

    1996-01-01

    Assemblages of foraminiferal tests in sediments sampled off Key Largo, Florida, in 1982, 1991, and 1992 were significantly different from assemblages sampled along the same traverses in 1959-1961. Larger, algal symbiont-bearing taxa, primarily Soritidae, comprised 50-80% of the specimens in samples collected in 1959-1961, whereas Miliolidae and Rotaliidae comprised 65-90% of the specimens collected in 1991 and 1992. Test abundance in 1992 samples ranged from 1.0 ?? 102/g to 8.1 ?? 104/g; tests were least abundant in coarse, well-sorted sediments. The lack of test-density data for the 1959-1961 samples prevented assessment of whether densities of smaller foraminifera have increased, symbiotic foraminifera have decreased, or both. Between 1982 and 1992, densities of smaller foraminifera appear to have increased. Although the causes of these changes in foraminiferal assemblages are not known, possible factors include nutrient loading inshore, winnowing and transport of tests by storm activity, and disease. The shift in dominance from long-lived, algal symbiont-bearing taxa in 1959-1961 to small, fast-growing, heterotrophic taxa in 1992 is consistent with predictions of community response to gradually increasing nutrient flux into south Florida's coastal waters. This study indicates that published accounts of foraminiferal assemblages from sediments collected 30 or more years ago can be valuable resources in efforts to determine if biotic changes have occurred in coastal ecosystems. This study also indicates that family-level identifications may be sufficient to detect decadal-scale changes in foraminiferal assemblages in reef-tract sediments.

  9. Fish assemblage structure and habitat associations in a large western river system

    USGS Publications Warehouse

    Smith, C.D.; Quist, Michael C.; Hardy, R. S.

    2016-01-01

    Longitudinal gradients of fish assemblage and habitat structure were investigated in the Kootenai River of northern Idaho. A total of 43 500-m river reaches was sampled repeatedly with several techniques (boat-mounted electrofishing, hoop nets and benthic trawls) in the summers of 2012 and 2013. Differences in habitat and fish assemblage structure were apparent along the longitudinal gradient of the Kootenai River. Habitat characteristics (e.g. depth, substrate composition and water velocity) were related to fish assemblage structure in three different geomorphic river sections. Upper river sections were characterized by native salmonids (e.g. mountain whitefish Prosopium williamsoni), whereas native cyprinids (peamouth Mylocheilus caurinus, northern pikeminnow Ptychocheilus oregonensis) and non-native fishes (pumpkinseed Lepomis gibbosus, yellow perch Perca flavescens) were common in the downstream section. Overall, a general pattern of species addition from upstream to downstream sections was discovered and is likely related to increased habitat complexity and additions of non-native species in downstream sections. Assemblage structure of the upper sections were similar, but were both dissimilar to the lower section of the Kootenai River. Species-specific hurdle regressions indicated the relationships among habitat characteristics and the predicted probability of occurrence and relative abundance varied by species. Understanding fish assemblage structure in relation to habitat could improve conservation efforts of rare fishes and improve management of coldwater river systems.

  10. Mineralized breccia clasts: a window into hidden porphyry-type mineralization underlying the epithermal polymetallic deposit of Cerro de Pasco (Peru)

    NASA Astrophysics Data System (ADS)

    Rottier, Bertrand; Kouzmanov, Kalin; Casanova, Vincent; Bouvier, Anne-Sophie; Baumgartner, Lukas P.; Wälle, Markus; Fontboté, Lluís

    2018-01-01

    Cerro de Pasco (Peru) is known for its large epithermal polymetallic (Zn-Pb-Ag-Cu-Bi) mineralization emplaced at shallow level, a few hundred meters below the paleo-surface, at the border of a large diatreme-dome complex. Porphyry-style veins crosscutting hornfels and magmatic rock clasts are found in the diatreme breccia and in quartz-monzonite porphyry dikes. Such mineralized veins in clasts allow investigation of high-temperature porphyry-style mineralization developed in the deep portions of magmatic-hydrothermal systems. Quartz in porphyry-style veins contains silicate melt inclusions as well as fluid and solid mineral inclusions. Two types of high-temperature (> 600 °C) quartz-molybdenite-(chalcopyrite)-(pyrite) veins are found in the clasts. Early, thin (1-2 mm), and sinuous HT1 veins are crosscut by slightly thicker (up to 2 cm) and more regular HT2 veins. The HT1 vein quartz hosts CO2- and sulfur-rich high-density vapor inclusions. Two subtypes of the HT1 veins have been defined, based on the nature of mineral inclusions hosted in quartz: (i) HT1bt veins with inclusions of K-feldspar, biotite, rutile, and minor titanite and (ii) HT1px veins with inclusions of actinolite, augite, titanite, apatite, and minor rutile. Using an emplacement depth of the veins of between 2 and 3 km (500 to 800 bar), derived from the diatreme breccia architecture and the supposed erosion preceding the diatreme formation, multiple mineral thermobarometers are applied. The data indicate that HT1 veins were formed at temperatures > 700 °C. HT2 veins host assemblages of polyphase brine inclusions, generally coexisting with low-density vapor-rich inclusions, trapped at temperatures around 600 °C. Rhyolitic silicate melt inclusions found in both HT1 and HT2 veins represent melt droplets transported by the ascending hydrothermal fluids. LA-ICP-MS analyses reveal a chemical evolution coherent with the crystallization of an evolved rhyolitic melt. Quartz from both HT1 and HT2 veins

  11. Does climate influence assemblages of anurans and lizards in a coastal area of north-eastern Brazil?

    NASA Astrophysics Data System (ADS)

    Rodrigues, João Fabrício Mota; Borges-Leite, Maria Juliana; Borges-Nojosa, Diva Maria

    2016-11-01

    Environmental factors influence diverse assemblage features such as species abundances, richness, and nestedness. Amphibians and reptiles play important roles in terrestrial ecosystems, but there is still a lack of information about the assemblages of these animals in many regions. In this study, we aimed to understand how environmental factors influence the anurans and lizards assemblages from São Gonçalo do Amarante, Ceará, Brazil. Herpetofauna samplings were performed monthly in São Gonçalo do Amarante from January 2008 to May 2009, excluding April 2008. We sampled animals (anurans and lizards) using pitfall traps and active searches. The abundance and richness of lizards were positively related to temperature and negatively related to precipitation. Anuran assemblage was not influenced by precipitation, but its abundance was negatively influenced by temperature. Temperature generated a nested pattern in the lizard assemblage, but precipitation did not produce this pattern in anurans. Finally, our results reinforce the importance of environmental factors, mainly temperature, in structuring assemblages of anurans and lizards.

  12. Occurrence of the Visible Gold and Sn-Bearing Mineral in Seafloor Hydrothermal Sulfides at Central Indian Ridge, 12.4°S

    NASA Astrophysics Data System (ADS)

    Choi, S. K.; Pak, S. J.; Kim, J.; Park, J. W.; Son, S. K.

    2017-12-01

    Sn-rich chimney fragments (up to 1,720 ppm) were recovered with ultramafic rocks from ocean core complex (OCC-4-1) of Central Indian Ridge, 12.4°S. The chimney fragments are featured by barite-free and Zn-rich (up to 50.1 wt.%) ores. The chimney fragments are mainly composed of sphalerite, isocubanite, pyrrhotite, chalcopyrite and marcasite with galena and electrum as minor minerals. The precipitation sequences of the minerals are categorized into three stages by mineral assemblage; early stage with low-temperature minerals, late stage with high-temperature minerals and seawater weathering stage with covellite, Fe-oxyhydroxides and amorphous silica. Early stage is characterized by sphalerite, intermittently showing colloform-texture, closely co-existed with anhedral marcasite and minor galena, whereas late stage is dominated by aggregates of isocubanite with chalcopyrite exsolution lamellae, pyrrhotite partially replaced by long prismatic marcasite and FeS enriched sphalerite (up to 42.69 FeS mole%). Electrums, main phase of gold mineralization, are mostly visible grains (< 3 um in diameter), occuring in sphalerite and isocubanite as inclusions and/or free gold in amorphous silica through the whole mineralization stages. On the basis of semi-quantified analysis, electrum grains are likely to have Au-rich composition. High Sn concentrations are typically observed in altered rim along the grain boundaries between sphalerite and isocubanite, going up to 5.5 wt.% in sphalerite. LA-ICP-MS mapping exhibits that Sn is preferentially incorporated into sphalerite relative to isocubanite, especially showing the highest values in boundaries between both minerals, but significantly lower in marcasite. Stoichiometry of Sn-enriched sphalerite rim seems to have a uniform ratio of atomic proportion of Cu to Sn as almost 2:1, implying that stannite micro-inclusions may result in Sn-enrichment. The LA-ICP-MS spectra also shows abrupt increase in Sn signal intensity, indicating Sn

  13. Living and dead foraminiferal assemblages from an active submarine canyon and surrounding sectors: the Gioia Canyon system (Tyrrhenian Sea, Southern Italy)

    NASA Astrophysics Data System (ADS)

    Letizia, Di Bella; Martina, Pierdomenico; Roberta, Porretta; Chiocci, Francesco Latino; Eleonora, Martorelli

    2017-05-01

    Living (rose Bengal stained) and dead benthic foraminiferal assemblages were studied from 23 stations located between 60 and 670 m depth along the Gioia Canyon and the adjacent continental shelf and slope (Southern Tyrrhenian Sea). The aim of this study is to investigate the relationships among sedimentary processes, hydrological patterns and benthic foraminiferal distribution, in a highly dynamic environment. High sedimentation rates on the shelf and occasional turbidity flows along the canyon, lead to unstable environmental conditions at the seafloor that reflect on the microbenthic community influencing faunal density, diversity, species composition and distribution inside the sediment. The foraminiferal distribution seems to be controlled by sedimentary processes, nutrient supply and organic matter recycling, which in turn are strongly controlled by the seasonal variability of riverine inputs and current dynamics in the Gulf of Gioia. From the inner shelf to the upper continental slope (550 m depth), the living foraminiferal assemblage is dominated by agglutinated taxa, likely favored by the high terrigenous supply. Frequent eutrophic taxa (Valvulineria bradyana and Nonionella turgida) tolerant high turbidity (Leptohalysis scottii,) and low oxygen (Bolivina spp. and Bulimina spp.) are recorded on the edge of the inner shelf, where channeling, deposition of coastal deposits and occasional sediment gravity flows occur. In the outer sector of the shelf a turnover of species is observed; L. scottii replaced by the opportunistic species Reophax scorpiurus, and taxa indicative of high energy conditions (Cassidulina spp.) become dominant in association with mesotrophic species like Globocassidulina subglobosa. Along the continental slope, lower sedimentation rates and more stable environmental conditions support richer and more diversified foraminiferal assemblage. The abundance of Bulimina marginata indicates eutrophic conditions at the shallower station (300 m depth

  14. Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages

    PubMed Central

    Aguirre, Luis F.; Montaño-Centellas, Flavia A.; Gavilanez, M. Mercedes; Stevens, Richard D.

    2016-01-01

    Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional

  15. Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

    PubMed

    Aguirre, Luis F; Montaño-Centellas, Flavia A; Gavilanez, M Mercedes; Stevens, Richard D

    2016-01-01

    Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional

  16. Soil nematode assemblages as bioindicators of radiation impact in the Chernobyl Exclusion Zone.

    PubMed

    Lecomte-Pradines, C; Bonzom, J-M; Della-Vedova, C; Beaugelin-Seiller, K; Villenave, C; Gaschak, S; Coppin, F; Dubourg, N; Maksimenko, A; Adam-Guillermin, C; Garnier-Laplace, J

    2014-08-15

    In radioecology, the need to understand the long-term ecological effects of radioactive contamination has been emphasised. This requires that the health of field populations is evaluated and linked to an accurate estimate of received radiological dose. The aim of the present study was to assess the effects of current radioactive contamination on nematode assemblages at sites affected by the fallout from the Chernobyl accident. First, we estimated the total dose rates (TDRs) absorbed by nematodes, from measured current soil activity concentrations, Dose Conversion Coefficients (DCCs, calculated using EDEN software) and soil-to-biota concentration ratios (from the ERICA tool database). The impact of current TDRs on nematode assemblages was then evaluated. Nematodes were collected in spring 2011 from 18 forest sites in the Chernobyl Exclusion Zone (CEZ) with external gamma dose rates, measured using radiophotoluminescent dosimeters, varying from 0.2 to 22 μGy h(-1). These values were one order of magnitude below the TDRs. A majority of bacterial-, plant-, and fungal-feeding nematodes and very few of the disturbance sensitive families were identified. No statistically significant association was observed between TDR values and nematode total abundance or the Shannon diversity index (H'). The Nematode Channel Ratio (which defines the relative abundance of bacterial- versus fungal-feeding nematodes) decreased significantly with increasing TDR, suggesting that radioactive contamination may influence nematode assemblages either directly or indirectly by modifying their food resources. A greater Maturity Index (MI), usually characterising better soil quality, was associated with higher pH and TDR values. These results suggest that in the CEZ, nematode assemblages from the forest sites were slightly impacted by chronic exposure at a predicted TDR of 200 μGy h(-1). This may be imputable to a dominant proportion of pollutant resistant nematodes in all sites. This might

  17. Environmental constraints on the compositional and phylogenetic beta-diversity of tropical forest snake assemblages.

    PubMed

    Moura, Mario R; Costa, Henrique C; Argôlo, Antônio J S; Jetz, Walter

    2017-09-01

    The ongoing biodiversity crisis increases the importance and urgency of studies addressing the role of environmental variation on the composition and evolutionary history of species assemblages, but especially the tropics and ectotherms remain understudied. In regions with rainy summers, coexistence of tropical ectothermic species may be determined by the partitioning of the climatic niche, as ectotherms can rely on water availability and thermoregulatory behaviour to buffer constraints along their climatic niche. Conversely, tropical ectotherms facing dry summers would have fewer opportunities to climatic niche partitioning and other processes rather than environmental filtering would mediate species coexistence. We used 218 snake assemblages to quantify the compositional (CBD) and phylogenetic (PBD) beta-diversity of snakes in the Atlantic Forest (AF) hotspot, South America. We identify two AF regions with distinct climatological regimes: dry summers in the northern-AF and rainy summers in the southern-AF. While accounting for the influence of multiscale spatial processes, we disentangle the relative contribution of thermal, water-related and topographic conditions in structuring the CBD and PBD of snake assemblages, and determine the extent in which snake assemblages under distinct climatological regimes are affected by environmental filtering. Thermal conditions best explain CBD and PBD of snakes for the whole AF, whereas water-related factors best explain the structure of snake assemblages within a same climatological regime. CBD and PBD patterns are similarly explained by spatial factors but snake assemblages facing dry summers are more affected by spatial processes operating at fine to intermediate spatial scale, whereas those assemblages in regions with rainy summers have a stronger signature of coarse-scale processes. As expected, environmental filtering plays a stronger role in southern-AF than northern-AF, and the synergism between thermal and water

  18. Coastal Fish Assemblages Reflect Geological and Oceanographic Gradients Within An Australian Zootone

    PubMed Central

    Harvey, Euan S.; Cappo, Mike; Kendrick, Gary A.; McLean, Dianne L.

    2013-01-01

    Distributions of mobile animals have been shown to be heavily influenced by habitat and climate. We address the historical and contemporary context of fish habitats within a major zootone: the Recherche Archipelago, southern western Australia. Baited remote underwater video systems were set in nine habitat types within three regions to determine the species diversity and relative abundance of bony fishes, sharks and rays. Constrained ordinations and multivariate prediction and regression trees were used to examine the effects of gradients in longitude, depth, distance from islands and coast, and epibenthic habitat on fish assemblage composition. A total of 90 species from 43 families were recorded from a wide range of functional groups. Ordination accounted for 19% of the variation in the assemblage composition when constrained by spatial and epibenthic covariates, and identified redundancy in the use of distance from the nearest emergent island as a predictor. A spatial hierarchy of fourteen fish assemblages was identified using multivariate prediction and regression trees, with the primary split between assemblages on macroalgal reefs, and those on bare or sandy habitats supporting seagrass beds. The characterisation of indicator species for assemblages within the hierarchy revealed important faunal break in fish assemblages at 122.30 East at Cape Le Grand and subtle niche partitioning amongst species within the labrids and monacanthids. For example, some species of monacanthids were habitat specialists and predominantly found on seagrass (Acanthaluteres vittiger, Scobinichthys granulatus), reef (Meuschenia galii, Meuschenia hippocrepis) or sand habitats (Nelusetta ayraudi). Predatory fish that consume molluscs, crustaceans and cephalopods were dominant with evidence of habitat generalisation in reef species to cope with local disturbances by wave action. Niche separation within major genera, and a sub-regional faunal break, indicate future zootone mapping should

  19. Fungal Diversity Is Not Determined by Mineral and Chemical Differences in Serpentine Substrates

    PubMed Central

    Daghino, Stefania; Murat, Claude; Sizzano, Elisa; Girlanda, Mariangela; Perotto, Silvia

    2012-01-01

    The physico-chemical properties of serpentine soils lead to strong selection of plant species. Whereas many studies have described the serpentine flora, little information is available on the fungal communities dwelling in these sites. Asbestos minerals, often associated with serpentine rocks, can be weathered by serpentine-isolated fungi, suggesting an adaptation to this substrate. In this study, we have investigated whether serpentine substrates characterized by the presence of rocks with distinct mineral composition could select for different fungal communities. Both fungal isolation and 454 pyrosequencing of amplicons obtained from serpentine samples following direct DNA extraction revealed some fungal taxa shared by the four ophiolitic substrates, but also highlighted several substrate-specific taxa. Bootstrap analysis of 454 OTU abundances indicated weak clustering of fungal assemblages from the different substrates, which did not match substrate classification based on exchangeable macronutrients and metals. Intra-substrate variability, as assessed by DGGE profiles, was similar across the four serpentine substrates, and comparable to inter-substrate variability. These findings indicate the absence of a correlation between the substrate (mineral composition and available cations) and the diversity of the fungal community. Comparison of culture-based and culture-independent methods supports the higher taxonomic precision of the former, as complementation of the better performance of the latter. PMID:23028507

  20. Mineralization, alteration, and hydrothermal metamorphism of the ophiolite-hosted Turner-Albright sulfide deposit, southwestern Oregon

    USGS Publications Warehouse

    Zierenberg, R.A.; Shanks, Wayne C.; Seyfried, W.E.; Koski, R.A.; Strickler, M.D.

    1988-01-01

    The Turner-Albright sulfide deposit, part of the Josephine ophiolite, formed on and below the seafloor during Late Jurassic volcanism at a back arc spreading center. Ore fluids were probably localized by faults which were active on the seafloor at the time of sulfide deposition. The uppermost massive sulfide formed on the seafloor at hydrothermal vents. The bulk of the sulfide mineralization formed below the seafloor within olivine basalt hyaloclastite erupted near the time of mineralization. Infiltration of hydrothermal fluid into the hyaloclastite altered the rock. The fluid responsible for the hydrothermal alteration was evolved seawater with low pH and Mg and high Fe. The average value of sulfide and the difference between sulfide and contemporaneous seawater sulfate values are similar to ophiolite-hosted sulfide deposits in Cyprus. Mudstone and clinopyroxene basalt above the sulfide horizons were not altered by the ore-transporting hydrothermal fluid, but these rocks were hydrothermally metamorphosed by altered seawater heated by deep circulation into hot oceanic crust. This subseafloor metamorphism produced a mineral assemblage typical of prehnite-pumpellyite facies metamorphism. Exchange with altered seawater increased the whole-rock ??18O of the basalts to values of 9.4-11.2%. -from Authors

  1. Origin of an Assemblage Massively Dominated by Carnivorans from the Miocene of Spain

    PubMed Central

    Domingo, M. Soledad; Alberdi, M. Teresa; Azanza, Beatriz; Silva, Pablo G.; Morales, Jorge

    2013-01-01

    Carnivoran-dominated fossil sites provide precious insights into the diversity and ecology of species rarely recovered in the fossil record. The lower level assemblage of Batallones-1 fossil site (Late Miocene; Madrid Basin, Spain) has yielded one of the most abundant and diversified carnivoran assemblage ever known from the Cenozoic record of mammals. A comprehensive taphonomic study is carried out here in order to constrain the concentration mode of this remarkable assemblage. Another distinctive feature of Batallones-1 is that the accumulation of carnivoran remains took place in the context of a geomorphological landform (cavity formation through a piping process) practically unknown in the generation of fossil sites. Two characteristics of the assemblage highly restrict the probable causes for the accumulation of the remains: (1) the overwhelming number of carnivorans individuals; and (2) the mortality profiles estimated for the four most abundant taxa do not correspond to the classic mortality types but rather were the consequence of the behavior of the taxa. This evidence together with other taphonomic data supports the hypothesis that carnivoran individuals actively entered the cavity searching for resources (food or water) and were unable to exit. The scarcity of herbivores implies that the shaft was well visible and avoided by these taxa. Fossil bones exhibit a very good preservation state as a consequence of their deposition in the restricted and protective environment of the chamber. Batallones-1 had another assemblage (upper level assemblage) that was dominated by herbivore remains and that potentially corresponded to the final stages of the cavity filling. PMID:23650542

  2. Relationship between 'live' and dead benthic foraminiferal assemblages in the abyssal NE Atlantic

    NASA Astrophysics Data System (ADS)

    Stefanoudis, Paris V.; Bett, Brian J.; Gooday, Andrew J.

    2017-03-01

    Dead foraminiferal assemblages within the sediment mixed layer provide an integrated, time-averaged view of the foraminiferal fauna, while the relationship between dead and live assemblages reflects the population dynamics of different species together with taphonomic processes operating over the last few hundred years. Here, we analysed four samples for 'live' (Rose-Bengal-stained) and dead benthic foraminifera (0-1 cm sediment layer, >150 μm) from four sites in the area of the Porcupine Abyssal Plain Sustained Observatory (PAP-SO; NE Atlantic, 4850 m water depth). Two sites were located on abyssal hills and two on the adjacent abyssal plain. Our results indicate that the transition from live to dead benthic foraminiferal assemblages involved a dramatic loss of delicate agglutinated and organic-walled tests (e.g. Lagenammina, Nodellum, Reophax) with poor preservation potential, and to a lesser extent that of some relatively fragile calcareous tests (mostly miliolids), possibly a result of dissolution. Other processes, such as the transport of tests by bottom currents and predation, are unlikely to have substantially altered the composition of dead faunas. Positive live to dead ratios suggest that some species (notably Epistominella exigua and Bolivina spathulata) may have responded to recent phytodetritus input. Although the composition of live assemblages seemed to be influenced by seafloor topography (abyssal hills vs. plain), no such relation was found for dead assemblages. We suggest that PAP-SO fossil assemblages are likely to be comparable across topographically contrasting sites, and dominated by calcareous and some robust agglutinated forms with calcitic cement (e.g. Eggerella).

  3. Survival of ship biofouling assemblages during and after voyages to the Canadian Arctic.

    PubMed

    Chan, Farrah T; MacIsaac, Hugh J; Bailey, Sarah A

    2016-01-01

    Human-mediated vectors often inadvertently translocate species assemblages to new environments. Examining the dynamics of entrained species assemblages during transport can provide insights into the introduction risk associated with these vectors. Ship biofouling is a major transport vector of nonindigenous species in coastal ecosystems globally, yet its magnitude in the Arctic is poorly understood. To determine whether biofouling organisms on ships can survive passages in Arctic waters, we examined how biofouling assemblage structure changed before, during, and after eight round-trip military voyages from temperate to Arctic ports in Canada. Species richness first decreased (~70% loss) and then recovered (~27% loss compared to the original assemblages), as ships travelled to and from the Arctic, respectively, whereas total abundance typically declined over time (~55% total loss). Biofouling community structure differed significantly before and during Arctic transits as well as between those sampled during and after voyages. Assemblage structure varied across different parts of the hull; however, temporal changes were independent of hull location, suggesting that niche areas did not provide protection for biofouling organisms against adverse conditions in the Arctic. Biofouling algae appear to be more tolerant of transport conditions during Arctic voyages than are mobile, sessile, and sedentary invertebrates. Our results suggest that biofouling assemblages on ships generally have poor survivorship during Arctic voyages. Nonetheless, some potential for transporting nonindigenous species to the Arctic via ship biofouling remains, as at least six taxa new to the Canadian Arctic, including a nonindigenous cirripede, appeared to have survived transits from temperate to Arctic ports.

  4. Different processes lead to similar patterns: a test of codivergence and the role of sea level and climate changes in shaping a southern temperate freshwater assemblage

    PubMed Central

    2011-01-01

    Background Understanding how freshwater assemblages have been formed and maintained is a fundamental goal in evolutionary and ecological disciplines. Here we use a historical approach to test the hypothesis of codivergence in three clades of the Chilean freshwater species assemblage. Molecular studies of freshwater crabs (Aegla: Aeglidae: Anomura) and catfish (Trichomycterus arealatus: Trichomycteridae: Teleostei) exhibited similar levels of genetic divergences of mitochondrial lineages between species of crabs and phylogroups of the catfish, suggesting a shared evolutionary history among the three clades in this species assemblage. Results A phylogeny was constructed for Trichomycterus areolatus under the following best-fit molecular models of evolution GTR + I + R, HKY + I, and HKY for cytochrome b, growth hormone, and rag 1 respectively. A GTR + I + R model provided the best fit for both 28S and mitochondrial loci and was used to construct both Aegla phylogenies. Three different diversification models were observed and the three groups arose during different time periods, from 2.25 to 5.05 million years ago (Ma). Cladogenesis within Trichomycterus areolatus was initiated roughly 2.25 Ma (Late Pliocene - Early Pleistocene) some 1.7 - 2.8 million years after the basal divergences observed in both Aegla clades. These results reject the hypothesis of codivergence. Conclusions The similar genetic distances between terminal sister-lineages observed in these select taxa from the freshwater Chilean species assemblage were formed by different processes occurring over the last ~5.0 Ma. Dramatic changes in historic sea levels documented in the region appear to have independently shaped the evolutionary history of each group. Our study illustrates the important role that history plays in shaping a species assemblage and argues against assuming similar patterns equal a shared evolutionary history. PMID:22118288

  5. Changes in Nannoplankton Assemblages during the recovery of the Paleocene Eocene Thermal Maximum (PETM)

    NASA Astrophysics Data System (ADS)

    Grey, J. A.; Bralower, T. J.; Self-Trail, J. M.

    2016-12-01

    The recovery interval of the Paleocene Eocene Thermal Maximum (PETM) presents an opportunity to examine how organisms adapt to environmental change after a rapid global warming event. Calcareous nannoplankton survived the PETM, but we lack an understanding of how long it took for assemblages to adapt to a changing climate and the millennial-scale changes in their ecology. Here, we present the first high-resolution record of nannoplankton community change during the PETM recovery using a global data set (United States Geological Survey (USGS) Wilson Lake core, USGS Cam-Dor core, Ocean Drilling Program (ODP) Sites 690, 1265, and 1209) to assess millennial-scale assemblage change across space and time. Preliminary multivariate analyses on assemblage changes at Wilson Lake demonstrate that within 20,000 years after the onset, the structure of nannoplankton communities shifts from an assemblage dominated by warm eutrophic specialists to one dominated by eutrophic low salinity specialists. In the late recovery, ubiquitous taxa dominate assemblages, suggesting that the shelf environment became favorable for generalists. The latest part of the recovery is marked by a slight increase in oligotrophic specialists, indicating that the shelf became less eutrophic into the early Eocene. Overall, these analyses suggest that assemblages changed rapidly in response to cooling and changing ocean circulation during the early recovery of the PETM. Future analyses will build on these data by comparing assemblage change from other PETM coastal and open ocean sites. These analyses will help us better understand the spatial and temporal changes of nannoplankton communities on a global scale, lessons that can inform how nannoplankton will respond to future climate change.

  6. Assemblage Organization in Stream Fishes: Effects of Enviromental Variation and Interspecific Interactions

    Treesearch

    Gary D. Grossman; Robert E. Ratajczak; Maurice Crawford; Mary C. Freeman

    1998-01-01

    We assessed the relative importance of environmental variation, interspecific competition for space, and predator abundance on assemblage structure and microhabitat use in a stream fish assemblage inhabiting Coweeta Creek, North Carolina, USA. Our study encompassed a l0-yr time span (1983-1992) and included some of the highest and lowest flows in the last 58 years. We...

  7. Fish-assemblage variation between geologically defined regions and across a longitudinal gradient in the Monkey River Basin, Belize

    USGS Publications Warehouse

    Esselman, P.C.; Freeman, Mary C.; Pringle, C.M.

    2006-01-01

    Linkages between geology and fish assemblages have been inferred in many regions throughout the world, but no studies have yet investigated whether fish assemblages differ across geologies in Mesoamerica. The goals of our study were to: 1) compare physicochemical conditions and fish-assemblage structure across 2 geologic types in headwaters of the Monkey River Basin, Belize, and 2) describe basin-scale patterns in fish community composition and structure for the benefit of conservation efforts. We censused headwater-pool fishes by direct observation, and assessed habitat size, structure, and water chemistry to compare habitat and fish richness, diversity, evenness, and density between streams in the variably metamorphosed sedimentary geologic type typical of 80% of Belize's Maya Mountains (the Santa Rosa Group), and an anomalous extrusive geologic formation in the same area (the Bladen Volcanic Member). We also collected species-presence data from 20 sites throughout the basin for analyses of compositional patterns from the headwaters to the top of the estuary. Thirty-nine fish species in 21 families were observed. Poeciliids were numerically dominant, making up 39% of individuals captured, followed by characins (25%), and cichlids (20%). Cichlidae was the most species-rich family (7 spp.), followed by Poeciliidae (6 spp.). Habitat size and water chemistry differed strongly between geologic types, but habitat diversity did not. Major fish-assemblage differences also were not obvious between geologies, despite a marked difference in the presence of the aquatic macrophyte, Marathrum oxycarpum (Podostemaceae), which covered 37% of the stream bottom in high-nutrient streams draining the Santa Rosa Group, and did not occur in the low-P streams draining the Bladen Volcanic Member. Correlation analyses suggested that distance from the sea and amount of cover within pools are important to fish-assemblage structure, but that differing abiotic factors may influence

  8. The Kongsberg silver deposits, Norway: Ag-Hg-Sb mineralization and constraints for the formation of the deposits

    NASA Astrophysics Data System (ADS)

    Kotková, Jana; Kullerud, Kåre; Šrein, Vladimír; Drábek, Milan; Škoda, Radek

    2018-04-01

    The Kongsberg silver district has been investigated by microscopy and electron microprobe analysis, focusing primarily on the Ag-Hg-Sb mineralization within the context of the updated mineral paragenesis. The earliest mineralization stage is represented by sulfides, including acanthite, and sulfosalts. Native silver formed initially through breakdown of early Ag-bearing phases and later through influx of additional Ag-bearing fluids and silver remobilization. The first two generations of native silver were separated in time by the formation of Ni-Co-Fe sulfarsenides and the monoarsenide niccolite along rims of silver crystals. The presence of As-free sulfosalts and the absence of di- and tri-arsenides suggest a lower arsenic/sulfur activity ratio for the Kongsberg deposits compared to other five-element deposits. Native silver shows binary Ag-Hg and Ag-Sb solid solutions, in contrast to the ternary Ag-Hg-Sb compositions typical for other deposits of similar type. Antimonial silver together with allargentum, dyscrasite, and pyrargyrite was documented exclusively from the northern area of the district. Elsewhere, the only Sb-bearing minerals are polybasite and tetrahedrite/freibergite. Hg-rich silver (up to 21 wt% Hg) has been documented only in the central-western area. Myrmekite of freibergite and chalcopyrite reflects exsolution from an original Ag-poor tetrahedrite upon cooling, while myrmekite of pyrite and silver, forming through breakdown of low-temperature phases (argentopyrite or lenaite) upon heating, characterizes the Kongsberg silver district. Based on the stabilities of minerals and mineral assemblages, the formation of the silver mineralization can be constrained to temperatures between 180 and 250 °C.

  9. Modeling the exhumation path of partially melted ultrahigh-pressure metapelites, North-East Greenland Caledonides

    NASA Astrophysics Data System (ADS)

    Lang, Helen M.; Gilotti, Jane A.

    2015-06-01

    Pseudosection modeling constrains the pressure-temperature (P-T) exhumation path of partially melted ultrahigh-pressure (UHP) metapelites exposed in the North-East Greenland UHP terrane. A robust peak P and T estimate of 3.6 GPa and 970 °C based on mineral assemblages in nearby kyanite eclogites is the starting point for the P-T path. Although the peak assemblage for the metapelite is not preserved, the calculated modeled peak assemblage contained substantial clinopyroxene, garnet, phengite, K-feldspar and coesite with minor kyanite and rutile. Combining the pseudosection and observed textures, the decompression path crosses the coesite-quartz transition before reaching the dry phengite dehydration melting reaction where phengite is abruptly consumed. In the range of 2.5 to 2.2 GPa, clinopyroxene is completely consumed and garnet grows to its maximum volume and grossular content, matching the high grossular rims of relict megacrysts. Plagioclase joins the assemblage and the pseudosection predicts up to 12-13 vol.% melt in the supersolidus assemblage, which contained garnet, liquid, K-feldspar, plagioclase, kyanite, quartz and rutile. At this stage, the steep decompression path flattened out and became nearly isobaric. The melt crystallization assemblage that formed when the path crossed the solidus with decreasing temperature contains phengite, garnet, biotite, 2 feldspars, kyanite, quartz and rutile. Therefore, the path must have intersected the solidus at approximately 1.2 GPa, 825 °C. The pseudosection predicts that garnet is consumed on the cooling path, but little evidence of late garnet consumption or other retrograde effects is observed. This may be due to partial melt loss from the rock. Isochemical PT-n and PT-X sections calculated along the P-T path display changes in mineral assemblage and composition that are consistent with preserved assemblages.

  10. Environmental Factors Support the Formation of Specific Bacterial Assemblages on Microplastics

    PubMed Central

    Oberbeckmann, Sonja; Kreikemeyer, Bernd; Labrenz, Matthias

    2018-01-01

    While the global distribution of microplastics (MP) in the marine environment is currently being critically evaluated, the potential role of MP as a vector for distinct microbial assemblages or even pathogenic bacteria is hardly understood. To gain a deeper understanding, we investigated how different in situ conditions contribute to the composition and specificity of MP-associated bacterial communities in relation to communities on natural particles. Polystyrene (PS), polyethylene (PE), and wooden pellets were incubated for 2 weeks along an environmental gradient, ranging from marine (coastal Baltic Sea) to freshwater (waste water treatment plant, WWTP) conditions. The associated assemblages as well as the water communities were investigated applying high-throughput 16S rRNA gene sequencing. Our setup allowed for the first time to determine MP-dependent and -independent assemblage factors as subject to different environmental conditions in one system. Most importantly, plastic-specific assemblages were found to develop solely under certain conditions, such as lower nutrient concentration and higher salinity, while the bacterial genus Erythrobacter, known for the ability to utilize polycyclic aromatic hydrocarbons (PAH), was found specifically on MP across a broader section of the gradient. We discovered no enrichment of potential pathogens on PE or PS; however, the abundant colonization of MP in a WWTP by certain bacteria commonly associated with antibiotic resistance suggests MP as a possible hotspot for horizontal gene transfer. Taken together, our study clarifies that the surrounding environment prevailingly shapes the biofilm communities, but that MP-specific assemblage factors exist. These findings point to the ecological significance of specific MP-promoted bacterial populations in aquatic environments and particularly in plastic accumulation zones. PMID:29403454

  11. Coesite-Diamond Assemblage in Ultrahigh Pressure Crustal and Mantle rocks: Evidence for Carbon Recycling

    NASA Astrophysics Data System (ADS)

    Sobolev, N. V.

    2010-12-01

    Coesite, a high-pressure polymorph of silica, was first discovered as part of a coesite-eclogite assemblage (coesite, garnet, omphacite) in equilibrium with diamond as diamond inclusion (DI) in Siberian diamond placers (Sobolev et al., 1976, Dokl. Akad. Nauk SSSR, 230: 1442). In recent years, coesite has become a key mineral coexisting with diamond both in kimberlite (DIs) and in UHP metamorphic rocks of the Kokchetav massif, Kazakhstan (diamondiferous gneisses and calcsilicate rocks). In the UHPM rocks of Kokchetav massif, coesite was first detected as inclusions in zircon associated with diamonds (Sobolev et al., 1991, Dokl. Akad. Nauk SSSR, 321: 184), as a result of the initial studies that had identified diamonds as inclusions in garnets and zircons (Sobolev, Shatsky, 1990, Nature, 343: 742). Garnet and omphacitic clinopyroxene are the principal primary minerals associated with coesite and diamond in UHP mantle and crustal rocks. Their compositions plot distinctly within the eclogitic compositional field and substantiate the existence of coesite presence as DIs in eclogitic (E-type) diamonds, as well as sometimes in xenoliths of diamondiferous eclogites (Shatsky et al., 2008, Lithos, 105:289). One of the major significant features of these eclogitic minerals in both UHPM and kimberlitic mantle occurrences is the K2O contents of the clinopyroxenes, reaching 1.6 wt.%, with Na2O and MnO in Ca-Mg-Fe garnets reaching 0.3 and 6.0 wt.%, respectively. Stable isotope data for C in diamonds and O in garnet, pyroxene and coesite have resulted in establishing a very wide range for these isotopes most typical for crustal conditions - i.e., atypical of mantle values. This is clearly shown for coesite DIs (Schulze et al., 2003, Nature, 428:68), garnets from diamondiferous eclogite xenoliths from Siberian kimberlites (Spetsius et al., 2008, Eur. J. Min., 20:375), garnets and clinopyroxenes from UHP calcsilicate diamondiferous rocks of the Kokchetav massif (Sobolev et al., in

  12. Airborne bacterial assemblage in a zero carbon building: A case study.

    PubMed

    Leung, M H Y; Tong, X; Tong, J C K; Lee, P K H

    2018-01-01

    Currently, there is little information pertaining to the airborne bacterial communities of green buildings. In this case study, the air bacterial community of a zero carbon building (ZCB) in Hong Kong was characterized by targeting the bacterial 16S rRNA gene. Bacteria associated with the outdoor environment dominated the indoor airborne bacterial assemblage, with a modest contribution from bacteria associated with human skin. Differences in overall community diversity, membership, and composition associated with short (day-to-day) and long-term temporal properties were detected, which may have been driven by specific environmental genera and taxa. Furthermore, time-decay relationships in community membership (based on unweighted UniFrac distances) and composition (based on weighted UniFrac distances) differed depending on the season and sampling location. A Bayesian source-tracking approach further supported the importance of adjacent outdoor air bacterial assemblage in sourcing the ZCB indoor bioaerosol. Despite the unique building attributes, the ZCB microbial assemblage detected and its temporal characteristics were not dissimilar to that of conventional built environments investigated previously. Future controlled experiments and microbial assemblage investigations of other ZCBs will undoubtedly uncover additional knowledge related to how airborne bacteria in green buildings may be influenced by their distinctive architectural attributes. © 2017 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  13. Impacts of discarded plastic bags on marine assemblages and ecosystem functioning.

    PubMed

    Green, Dannielle Senga; Boots, Bas; Blockley, David James; Rocha, Carlos; Thompson, Richard

    2015-05-05

    The accumulation of plastic debris is a global environmental problem due to its durability, persistence, and abundance. Although effects of plastic debris on individual marine organisms, particularly mammals and birds, have been extensively documented (e.g., entanglement and choking), very little is known about effects on assemblages and consequences for ecosystem functioning. In Europe, around 40% of the plastic items produced are utilized as single-use packaging, which rapidly accumulate in waste management facilities and as litter in the environment. A range of biodegradable plastics have been developed with the aspiration of reducing the persistence of litter; however, their impacts on marine assemblages or ecosystem functioning have never been evaluated. A field experiment was conducted to assess the impact of conventional and biodegradable plastic carrier bags as litter on benthic macro- and meio-faunal assemblages and biogeochemical processes (primary productivity, redox condition, organic matter content, and pore-water nutrients) on an intertidal shore near Dublin, Ireland. After 9 weeks, the presence of either type of bag created anoxic conditions within the sediment along with reduced primary productivity and organic matter and significantly lower abundances of infaunal invertebrates. This indicates that both conventional and biodegradable bags can rapidly alter marine assemblages and the ecosystem services they provide.

  14. Characterizing lentic freshwater fish assemblages using multiple sampling methods

    USGS Publications Warehouse

    Fischer, Jesse R.; Quist, Michael C.

    2014-01-01

    Characterizing fish assemblages in lentic ecosystems is difficult, and multiple sampling methods are almost always necessary to gain reliable estimates of indices such as species richness. However, most research focused on lentic fish sampling methodology has targeted recreationally important species, and little to no information is available regarding the influence of multiple methods and timing (i.e., temporal variation) on characterizing entire fish assemblages. Therefore, six lakes and impoundments (48–1,557 ha surface area) were sampled seasonally with seven gear types to evaluate the combined influence of sampling methods and timing on the number of species and individuals sampled. Probabilities of detection for species indicated strong selectivities and seasonal trends that provide guidance on optimal seasons to use gears when targeting multiple species. The evaluation of species richness and number of individuals sampled using multiple gear combinations demonstrated that appreciable benefits over relatively few gears (e.g., to four) used in optimal seasons were not present. Specifically, over 90 % of the species encountered with all gear types and season combinations (N = 19) from six lakes and reservoirs were sampled with nighttime boat electrofishing in the fall and benthic trawling, modified-fyke, and mini-fyke netting during the summer. Our results indicated that the characterization of lentic fish assemblages was highly influenced by the selection of sampling gears and seasons, but did not appear to be influenced by waterbody type (i.e., natural lake, impoundment). The standardization of data collected with multiple methods and seasons to account for bias is imperative to monitoring of lentic ecosystems and will provide researchers with increased reliability in their interpretations and decisions made using information on lentic fish assemblages.

  15. The Roman-Irish Bath: Medical/health history as therapeutic assemblage.

    PubMed

    Foley, Ronan

    2014-04-01

    The invention of a new form of hot-air bath in Blarney, Ireland in 1856, variously known in its lifetime as the Roman-Irish or Turkish Bath, acted as the starting point for a the production of a globalised therapeutic landscape. Tracking the diffusion of the Roman-Irish bath template from its local invention in Ireland to a global reach across the Victorian world and recognizing its place within a wider hydrotherapeutic history, this paper frames that diffusion as a valuable empirical addition to assemblage theory. The specific empirical history of the spread of the Roman-Irish/Turkish bath idea is drawn from primary archival and secondary historical sources. It is then discussed and, drawing from work on assemblage theory, analyzed against three broad themes: mobile networks, socio-material practices and contested emergence. The emergent relational geographies of the Roman-Irish Bath identify important roles for the diffusion and transformation of specific medical settings, identities and functions. These were linked in turn to competing social-healing pathways wherein bodies were technologically and morally managed, to produce a more inhabited form of therapeutic assemblage. In all cases the differential diffusion of the bath idea, it's shifting and fractured material forms and multiple inhabitations and discourses were contested and mobile and spoke to an assemblage approach which has ripe potential for exploration across a range of medical/health geography settings. Copyright © 2014 Elsevier Ltd. All rights reserved.

  16. Response of Tropical Stream Fish Assemblages to Small Hydropower Induced Flow Alteration in the Western Ghats of Karnataka, India.

    NASA Astrophysics Data System (ADS)

    Rao, S. T.

    2016-12-01

    Alteration of natural flow regime is considered as one of the major threats to tropical stream fish assemblages as it alters the physio-chemical and micro-habitat features of the river. Flow alteration induced by Small hydro-power (SHP) plants disrupts the flow regime by flow diversion and regulation. The effects of flow alteration on tropical stream fish assemblages, especially in the Western Ghats of India is largely understudied. Such a knowledge is imperative to set limits on flow alteration as SHPs in the Western Ghats are being planned at an unprecedented rate with exemption from environment impact assessments and backing in the form of government subsidies and carbon credits. This study aimed to understand the response of fish assemblages to SHP induced flow alteration in a regulated and unregulated tributary of the Yettinahole River in the Western Ghats of Karnataka. The study intended to quantify the natural and altered flow regime using automated periodic depth measurements, its effect on micro-habitats and environmental variables and finally, understand how fish assemblages respond to such changes. The response of fish assemblage was measured in terms of catch-per-site, species-regime associations and ecological distance between the regimes. The study used a space for time substitution approach and found that the altered flow regime dampened the diurnal and seasonal patterns of natural flow regime. The altered flow regime influenced variations in water quality, micro-habitat heterogeneity and fish assemblage response, each characteristic of the type of flow alteration. The natural flow regime was found to have a higher catch-per-site and strong associations with endemic and niche-specific taxa. Compositional dissimilarities, in terms of ecological distance were observed between the altered and the natural flow regime. Dewatered or flow diverted regime contained species with lentic affinities while an overall low catch-per-site and weak species

  17. The impact of Cenozoic cooling on assemblage diversity in planktonic foraminifera

    PubMed Central

    Pearson, Paul N.; Dunkley Jones, Tom; Farnsworth, Alexander; Lunt, Daniel J.; Markwick, Paul; Purvis, Andy

    2016-01-01

    The Cenozoic planktonic foraminifera (PF) (calcareous zooplankton) have arguably the most detailed fossil record of any group. The quality of this record allows models of environmental controls on macroecology, developed for Recent assemblages, to be tested on intervals with profoundly different climatic conditions. These analyses shed light on the role of long-term global cooling in establishing the modern latitudinal diversity gradient (LDG)—one of the most powerful generalizations in biogeography and macroecology. Here, we test the transferability of environment-diversity models developed for modern PF assemblages to the Eocene epoch (approx. 56–34 Ma), a time of pronounced global warmth. Environmental variables from global climate models are combined with Recent environment–diversity models to predict Eocene richness gradients, which are then compared with observed patterns. The results indicate the modern LDG—lower richness towards the poles—developed through the Eocene. Three possible causes are suggested for the mismatch between statistical model predictions and data in the Early Eocene: the environmental estimates are inaccurate, the statistical model misses a relevant variable, or the intercorrelations among facets of diversity—e.g. richness, evenness, functional diversity—have changed over geological time. By the Late Eocene, environment–diversity relationships were much more similar to those found today. PMID:26977064

  18. Some mineral stability relations in the system CaOMgOSiO2H2OHCl

    USGS Publications Warehouse

    Luce, R.W.; Cygan, G.L.; Hemley, J.J.; d'Angelo, W. M.

    1985-01-01

    Mineral-aqueous solution equilibria for the assemblages talc-quartz, tremolite-talc-quartz, diopside-tremolite-quartz, wollastonite-diopside-quartz and wollastonite-quartz have been studied at 2 kb total pressure, 500?? to 700??C and chloride concentrations from 0.03 to 6.0 molal. Most work was at 1 m chloride. Both buffered and unbuffered data were obtained and a recalibration of the Ag-AgCl buffer is presented. Log equilibrium quotients at 500??, 600?? and 700??C are respectively: Ta-Qz ( mMgCl2 mHCl2) 2.57, 1.71, 0.73; Tr-Ta-Qz and Di-Tr-Qz ( mCaCl2 mMgCl2mHCl2) 4.98, 3.99, 2.21 and 7.29, 5.30, 3.56; WoDi-Qz ( mCaCl2 mMgCl2) 3.30, 3.00, 2.79: Wo-Qz ( mCaCl2 mHCl2) 5.15, 3.95, 2.68. Mineral stability fields plotted in terms of these concentration data more tangibly represent the compositional character of real systems and the mass transfer capabilities of their fluids than do the analogous theoretical activity diagrams. Overall dissociation constants of MgCl2 and CaCl2 were calculated from the experimental data using the calculated ionic activity constants for the reactions and the established dissociation constants of HCl. The negative log values are respectively: 3.88. 6.63, 9.20 for CaCl2 and 4.60, 7.54, 10.37 for MgCl2 at 500??, 600?? and 700??C, 2 kb. The Ca values are about an order of magnitude more positive than the conductance-derived values by Frantz and Marshall (1982). The phase relations developed in this study have application to the genesis of talc, tremolite, and diopside-bearing assemblages in some regional metamorphic rocks, but more specifically to the calcsilicate skarn assemblages of many metasomatic aureoles. The equilibrium fluids are characterized by high concentrations of Ca relative to Mg and increasing Ca Mg ratios with decreasing temperatures. The stability fields of talc, tremolite, and quartz expand relative to those of diopside and wollastonite with decreasing temperature, hence their more common appearance as retrograde products in

  19. A Comparative Analyses of Granulometry, Mineral Composition and Major and Trace Element Concentrations in Soils Commonly Ingested by Humans

    PubMed Central

    Ngole-Jeme, Veronica M.; Ekosse, Georges-Ivo E.

    2015-01-01

    This study compared the granulometric properties, mineralogical composition and concentrations of major and trace element oxides of commonly ingested soils (geophagic soil) collected from different countries with a view of understanding how varied they may be in these properties and to understand the possible health implications of ingesting them. Soil samples were collected from three different countries (South Africa, Swaziland and Democratic Republic of Congo (DRC)) and their granulometric properties, concentrations of major and trace element oxides as well as mineralogical composition determined. Differences were observed in the granulometric properties of geophagic soil from the three different countries with most of them having <20% clay content. The soils also showed varied degrees of weathering with values of Chemical Index of Alteration (CIA) and Chemical Index of Weathering (CIW) being between 60% and 99.9% respectively. The mineral assemblages of the soils from South Africa and Swaziland were dominated by the primary minerals quartz and feldspar whereas soils from DRC had more of kaolinite, a secondary mineral than primary minerals. Soils from DRC were associated with silt, clay, Al2O3, and CIA unlike most samples from South Africa which were associated with SiO2, sand, K2O, CaO, and MgO. The soils from Swaziland were closely associated with silt, H2O and Fe2O3(t). These associations reflect the mineralogy of the samples. These soils are not likely to serve as nutrient supplements because of the low concentrations of the nutrient elements contained. The coarse texture of the samples may also result in dental destruction during mastication. Sieving of the soils before ingestion to remove coarse particles is recommended to reduce the potential health threat associated with the ingestion of coarse-textured soils. PMID:26264010

  20. Effects of a mulch layer on the assemblage and abundance of mesostigmatan mites and other arthropods in the soil of a sugarcane agro-ecosystem in Australia.

    PubMed

    Manwaring, M; Wallace, H M; Weaver, H J

    2018-03-01

    Sugarcane farmers can utilise a soil conservation technique called green cane trash blanketing, a form of mulching that can increase plant productivity through a number of channels, e.g., via altering soil physical, chemical and biological characteristics, and influence soil arthropod assemblages. Predatory mites (Mesostigmata) are important components of soil communities because they can control populations of other soil-dwelling pest species. Our aim was to characterise mulch-influenced predatory Mesostigmata community assemblages in sugarcane soils in Queensland, Australia. We found that application of a mulch layer significantly increased the abundance of Mesostigmata, and oribatid mites and collembolans, in soils. Furthermore, we observed that the assemblages of Mesostigmata in soil covered by mulch were significantly different to those in bare soil; and the assemblages of Mesostigmata changed over time. The assemblages of Mesostigmata, but not Oribatida or collembolans, were significantly different in soil under mulch depending on whether the mulch was freshly laid, or decomposing. Our results show that the use of mulch, specifically the green cane trash blanket, can increase overall microarthropod abundance including Mesostigmata. This is likely due to increased habitat complexity and changing resource availability.

  1. Temporal and spatial variability of pelagic wild fish assemblages around Atlantic bluefin tuna Thunnus thynnus farms in the eastern Adriatic Sea.

    PubMed

    Segvić Bubić, T; Grubišić, L; Tičina, V; Katavić, I

    2011-01-01

    The abundance and size structure of wild fishes aggregated around the sea-cages of two commercial Thunnus thynnus farms, including control locations, were assessed and compared over a 1 year period. The T. thynnus farms were located in the eastern Adriatic Sea, offshore of the islands of Ugljan and Brač. Fish assemblages were evaluated through visual census using scuba at 2 month intervals at two sites within each farm. The data suggest that wild fish assemblages at the study sites differed greatly; 20 species occurred at the Ugljan farm and 17 at the Brač farm, while only seven species were observed at the control locations. The abundance and diversity of wild fish assemblages were greater at the farms in comparison to control locations. The most abundant families were Sparidae and Belonidae (>80% of aggregated fishes). At both farms, the abundance and diversity of wild fishes were highest during summer, while diversity was lowest in winter and was mainly characterized by schools of bogue Boops boops and garfish Belone belone. Variability was also detected in spatial assemblages between farms; B. boops and B. belone were the most abundant species for the overall study at the Brač farm, while B. belone and saddled bream Oblada melanura were the most abundant at the Ugljan farm. The settlement also played a significant role in farm-associated fish assemblages, as both juveniles and advanced juveniles were common residents at farms. The majority of species which settled at the farms belonged to the sparids. Results indicate that aggregations of wild fishes at T. thynnus farms are persistent year-round, though the assemblage compositions and size structures of dominant species vary in respect to location and season. © 2011 The Authors. Journal of Fish Biology © 2011 The Fisheries Society of the British Isles.

  2. Phytoplankton Assemblages in Selected Freshwaters of New Jersey

    NASA Astrophysics Data System (ADS)

    Caraballo, Y. A.; Wu, M. S.

    2017-12-01

    Characterizing phytoplankton assemblages in freshwaters is crucial for future management and monitoring of drinking and recreational freshwaters of New Jersey. New Jersey freshwater phytoplankton assemblages are poorly known and there is no list of freshwater phytoplankton taxa in New Jersey. This study seeks to describe phytoplankton assemblages of freshwaters in New Jersey. Results will help address public health, economic and environmental threats related to harmful algal blooms in New Jersey. A total of 49 freshwater sites, including ponds, rivers and reservoirs, were used for this study. Overall results showed 66 taxa of freshwater phytoplankton in 6 major groups and 29 different orders. Green algae had the highest number of taxa, followed by diatoms and blue-greens (cyanobacteria). The most common freshwater taxa in NJ are Synedra spp., Fragilaria spp., Selenastrum capricornutum, Scenedesmus spp., and Anabaena spp. Cyanobacteria species are present in more than half of the sites examined in this study. All ten cyanobacteria taxa present in New Jersey freshwaters are capable of producing the endotoxin lipopolysaccharides (LPS), eight can produce the hepatotoxins and six can produce neutoroxins. In addition, some taxa such as Anabaena spp. are capable of simultaneously producing endotoxins, hepatotoxins, neurotoxins and taste and odor compounds. The presence of taxa capable of producing multiple toxins infers the difficulty of management and treatment as well as increased public health effects.

  3. The role of minerals in the thermal alteration of organic matter. III - Generation of bitumen in laboratory experiments

    NASA Technical Reports Server (NTRS)

    Huizinga, Bradley J.; Tannenbaum, Eli; Kaplan, I. R.

    1987-01-01

    A series of pyrolysis experiments, utilizing two different immature kerogens (from the Monterey and Green River Formations) mixed with common sedimentary minerals (calcite, illite, or Na-montmorillonite), was conducted to study the impact of the mineral matrix on the bitumen that was generated. Calcite has no significant influence on the thermal evolution of bitumen and also shows virtually no adsorption capacity for any of the pyrolysate. In contrast, montmorillonite (M) and illite, to a lesser extent, alter bitumen during dry pyrolysis. M and illite also display strong adsorption capacities for the polar constituents of bitumen. By this process, hydrocarbons are substantially concentrated within the pyrolysate that is not strongly adsorbed on the clay matrices. The effects of the clay minerals are significantly reduced during hydrous pyrolysis. The strong adsorption capacities of M and illite, as well as their thermocatalytic properties, may in part explain why light oils and gases are generated from certain argillaceous source-rock assemblages, whereas heavy immature oils are often derived from carbonate source rocks.

  4. Late-stage magmatic to deuteric/metasomatic accessory minerals from the Cerro Boggiani agpaitic complex (Alto Paraguay Alkaline Province)

    NASA Astrophysics Data System (ADS)

    Comin-Chiaramonti, Piero; Renzulli, Alberto; Ridolfi, Filippo; Enrich, Gaston E. R.; Gomes, Celso B.; De Min, Angelo; Azzone, Rogério G.; Ruberti, Excelso

    2016-11-01

    This work describes rare accessory minerals in volcanic and subvolcanic silica-undersaturated peralkaline and agpaitic rocks from the Permo-Triassic Cerro Boggiani complex (Eastern Paraguay) in the Alto Paraguay Alkaline Province. These accessory phases consist of various minerals including Th-U oxides/silicates, Nb-oxide, REE-Sr-Ba bearing carbonates-fluorcarbonates-phosphates-silicates and Zr-Na rich silicates. They form a late-stage magmatic to deuteric/metasomatic assemblage in agpaitic nepheline syenites and phonolite dykes/lava flows made of sodalite, analcime, albite, fluorite, calcite, ilmenite-pyrophanite, titanite and zircon. It is inferred that carbonatitic fluids rich in F, Na and REE percolated into the subvolcanic system and metasomatically interacted with the Cerro Boggiani peralkaline and agpaitic silicate melts at the thermal boundary layers of the magma chamber, during and shortly after their late-stage magmatic crystallization and hydrothermal deuteric alteration.

  5. Effects of hydrologic connectivity and environmental nariables on nekton assemblage in a coastal marsh system

    USGS Publications Warehouse

    Kang, Sung-Ryong; King, Sammy L.

    2013-01-01

    Hydrologic connectivity and environmental variation can influence nekton assemblages in coastal ecosystems. We evaluated the effects of hydrologic connectivity (permanently connected pond: PCP; temporary connected pond: TCP), salinity, vegetation coverage, water depth and other environmental variables on seasonal nekton assemblages in freshwater, brackish, and saline marshes of the Chenier Plain, Louisiana, USA. We hypothesize that 1) nekton assemblages in PCPs have higher metrics (density, biomass, assemblage similarity) than TCPs within all marsh types and 2) no nekton species would be dominant across all marsh types. In throw traps, freshwater PCPs in Fall (36.0 ± 1.90) and Winter 2009 (43.2 ± 22.36) supported greater biomass than freshwater TCPs (Fall 2009: 9.1 ± 4.65; Winter 2009: 8.3 ± 3.42). In minnow traps, saline TCPs (5.9 ± 0.85) in Spring 2009 had higher catch per unit effort than saline PCPs (0.7 ± 0.67). Our data only partially support our first hypothesis as freshwater marsh PCPs had greater assemblage similarity than TCPs. As predicted by our second hypothesis, no nekton species dominated across all marsh types. Nekton assemblages were structured by individual species responses to the salinity gradient as well as pond habitat attributes (submerged aquatic vegetation coverage, dissolved oxygen, hydrologic connectivity).

  6. Lunch Time at the Child Care Centre: Neoliberal Assemblages in Early Childhood Education

    ERIC Educational Resources Information Center

    Nxumalo, Fikile; Pacini-Ketchabaw, Veronica; Rowan, Mary Caroline

    2011-01-01

    In this article we interrogate neoliberal assemblages within the context of eating and feeding practices in early childhood education. We consider how neoliberal assemblages are enacted and created through multiple linkages between micro and macro regulations and policies, and everyday food routines. We attend to the embodied intensities, desires…

  7. Fracture sealing caused by mineral precipitation: The role of aperture and mineral heterogeneity on precipitation-induced permeability loss

    NASA Astrophysics Data System (ADS)

    Jones, T.; Detwiler, R. L.

    2017-12-01

    Fractures act as dominant pathways for fluid flow in low-permeability rocks. However, in many subsurface environments, fluid rock reactions can lead to mineral precipitation, which alters fracture surface geometry and reduces fracture permeability. In natural fractures, surface mineralogy and roughness are often heterogeneous, leading to variations in both velocity and reactive surface area. The combined effects of surface roughness and mineral heterogeneity can lead to large disparities in local precipitation rates that are difficult to predict due to the strong coupling between dissolved mineral transport and reactions at the fracture surface. Recent experimental observations suggest that mineral precipitation in a heterogeneous fracture may promote preferential flow and focus large dissolved ion concentrations into regions with limited reactive surface area. Here, we build on these observations using reactive transport simulations. Reactive transport is simulated with a quasi-steady-state 2D model that uses a depth-averaged mass-transfer relationship to describe dissolved mineral transport across the fracture aperture and local precipitation reactions. Mineral precipitation-induced changes to fracture surface geometry are accounted for using two different approaches: (1) by only allowing reactive minerals to grow vertically, and (2) by allowing three-dimensional mineral growth at reaction sites. Preliminary results from simulations using (1) suggest that precipitation-induced aperture reduction focuses flow into thin flow paths. This flow focusing causes a reduction in the fracture-scale precipitation rate, and precipitation ceases when the reaction zone extends the entire length of the fracture. This approach reproduces experimental observations at early time reasonably well, but as precipitation proceeds, reaction sites can grow laterally along the fracture surfaces, which is not predicted by (1). To account for three-dimensional mineral growth (2), we have

  8. Arthropod assemblages on native and nonnative plant species of a coastal reserve in California.

    PubMed

    Fork, Susanne K

    2010-06-01

    Biological invasions by nonnative plant species are a widespread phenomenon. Many studies have shown strong ecological impacts of plant invasions on native plant communities and ecosystem processes. Far fewer studies have examined effects on associated animal communities. From the perspective of a reserve's land management, I addressed the question of whether arthropod assemblages on two nonnative plant species of concern were impoverished compared with those assemblages associated with two predominant native plant species of that reserve. If the nonnative plant species, Conium maculatum L., and Phalaris aquatica L., supported highly depauperate arthropod assemblages compared with the native plant species, Baccharis pilularis De Candolle and Leymus triticoides (Buckley) Pilger, this finding would provide additional support for prioritizing removal of nonnatives and restoration of natives. I assessed invertebrate assemblages at the taxonomic levels of arthropod orders, Coleoptera families, and Formicidae species, using univariate analyses to examine community attributes (richness and abundance) and multivariate techniques to assess arthropod assemblage community composition differences among plant species. Arthropod richness estimates by taxonomic level between native and nonnative vegetation showed varying results. Overall, arthropod richness of the selected nonnative plants, examined at higher taxonomic resolution, was not necessarily less diverse than two of common native plants found on the reserve, although differences were found among plant species. Impacts of certain nonnative plant species on arthropod assemblages may be more difficult to elucidate than those impacts shown on native plants and ecosystem processes.

  9. Mineral textural evolution and PT-path of relict eclogite-facies rocks in the Paleoproterozoic Nagssugtoqidian Orogen, South-East Greenland

    NASA Astrophysics Data System (ADS)

    Müller, Sascha; Dziggel, Annika; Kolb, Jochen; Sindern, Sven

    2018-01-01

    The Nagssugtoqidian Orogen in South-East Greenland is a deeply eroded, Paleoproterozoic collision orogen. It consists of a variety of Archean and Paleoproterozoic rocks, most notably TTG gneiss, a variety of supracrustal rocks and basic dykes. This study aims at providing new insight into the geodynamic processes and subduction depth of this orogen by investigating the metamorphic evolution of garnet pyroxenite, retrogressed eclogite and amphibolite-facies rocks that are exposed within the Kuummiut Terrane of the Nagssugtoqidian Orogen. The garnet-pyroxenite has a dominant mineral assemblage of garnet, orthopyroxene, clinopyroxene and hornblende, while garnet-amphibolite and garnet-kyanite schist are made up of garnet, hornblende, plagioclase and quartz, and garnet, kyanite, biotite and quartz, respectively. Relicts of, and pseudomorphs after, eclogite-facies mineral assemblages are frequently found within basic metavolcanic rocks and Paleoproterozoic discordant basic dykes. In the retrogressed eclogite, the retrograde mineral reactions ceased prior to completion, resulting in the formation of two domains. A clinopyroxene domain consists of diopside-plagioclase symplectites, which are interpreted to have grown at the expense of omphacite. The symplectites are surrounded and partly replaced by hornblende and plagioclase. Omphacite (XJd 25-42) is preserved in a Na-rich sample, where it occurs in the core of large clinopyroxene and as inclusion in garnet and hornblende. In a garnet domain, garnet is variably replaced by an inner corona of plagioclase and an outer corona of amphibole +/- orthopyroxene and clinopyroxene. The degree of retrogression as well as the type of the retrograde assemblage in both domains appears to be dependent on fluid activity. Large garnet grains preserve Ca-rich cores, interpreted as prograde in origin, while Mg-rich garnet rims formed during eclogite-facies metamorphism and later re-equilibration. Pseudosection modelling combined with

  10. Influence of Fish Predation on Assemblage Structure of Macroinvertebrates in an Intermittent Stream

    Treesearch

    Lance R. Williams; Christopher M. Taylor; Melvin L. Warren

    2003-01-01

    Despite considerable investigation of stream systems, the influence of fish predation on macroinvertebrate assemblages is still poorly understood and remains a controversial subject. We conducted a field experiment in an intermittent reach of Alum Creek in the Ouachita Mountains, Arkansas, to examine the effects of predatory fish on macroinvertebrate assemblages. We...

  11. Large-Scale Spatial Distribution Patterns of Gastropod Assemblages in Rocky Shores

    PubMed Central

    Miloslavich, Patricia; Cruz-Motta, Juan José; Klein, Eduardo; Iken, Katrin; Weinberger, Vanessa; Konar, Brenda; Trott, Tom; Pohle, Gerhard; Bigatti, Gregorio; Benedetti-Cecchi, Lisandro; Shirayama, Yoshihisa; Mead, Angela; Palomo, Gabriela; Ortiz, Manuel; Gobin, Judith; Sardi, Adriana; Díaz, Juan Manuel; Knowlton, Ann; Wong, Melisa; Peralta, Ana C.

    2013-01-01

    Gastropod assemblages from nearshore rocky habitats were studied over large spatial scales to (1) describe broad-scale patterns in assemblage composition, including patterns by feeding modes, (2) identify latitudinal pattern of biodiversity, i.e., richness and abundance of gastropods and/or regional hotspots, and (3) identify potential environmental and anthropogenic drivers of these assemblages. Gastropods were sampled from 45 sites distributed within 12 Large Marine Ecosystem regions (LME) following the NaGISA (Natural Geography in Shore Areas) standard protocol (www.nagisa.coml.org). A total of 393 gastropod taxa from 87 families were collected. Eight of these families (9.2%) appeared in four or more different LMEs. Among these, the Littorinidae was the most widely distributed (8 LMEs) followed by the Trochidae and the Columbellidae (6 LMEs). In all regions, assemblages were dominated by few species, the most diverse and abundant of which were herbivores. No latitudinal gradients were evident in relation to species richness or densities among sampling sites. Highest diversity was found in the Mediterranean and in the Gulf of Alaska, while highest densities were found at different latitudes and represented by few species within one genus (e.g. Afrolittorina in the Agulhas Current, Littorina in the Scotian Shelf, and Lacuna in the Gulf of Alaska). No significant correlation was found between species composition and environmental variables (r≤0.355, p>0.05). Contributing variables to this low correlation included invasive species, inorganic pollution, SST anomalies, and chlorophyll-a anomalies. Despite data limitations in this study which restrict conclusions in a global context, this work represents the first effort to sample gastropod biodiversity on rocky shores using a standardized protocol across a wide scale. Our results will generate more work to build global databases allowing for large-scale diversity comparisons of rocky intertidal assemblages. PMID

  12. Opposing Patterns of Seasonal Change in Functional and Phylogenetic Diversity of Tadpole Assemblages

    PubMed Central

    Strauß, Axel; Guilhaumon, François; Randrianiaina, Roger Daniel; Wollenberg Valero, Katharina C.; Vences, Miguel; Glos, Julian

    2016-01-01

    Assemblages that are exposed to recurring temporal environmental changes can show changes in their ecological properties. These can be expressed by differences in diversity and assembly rules. Both can be identified using two measures of diversity: functional (FD) and phylogenetic diversity (PD). Frog communities are understudied in this regard, especially during the tadpole life stage. We utilised tadpole assemblages from Madagascan rainforest streams to test predictions of seasonal changes on diversity and assemblage composition and on diversity measures. From the warm-wet to the cool-dry season, species richness (SR) of tadpole assemblages decreased. Also FD and PD decreased, but FD less and PD more than expected by chance. During the dry season, tadpole assemblages were characterised by functional redundancy (among assemblages—with increasing SR), high FD (compared to a null model), and low PD (phylogenetic clustering; compared to a null model). Although mutually contradictory at first glance, these results indicate competition as tadpole community assembly driving force. This is true during the limiting cool-dry season but not during the more suitable warm-wet season. We thereby show that assembly rules can strongly depend on season, that comparing FD and PD can reveal such forces, that FD and PD are not interchangeable, and that conclusions on assembly rules based on FD alone are critical. PMID:27014867

  13. Global mammal beta diversity shows parallel assemblage structure in similar but isolated environments

    PubMed Central

    Graham, Catherine H.; Brooks, Thomas M.; Rondinini, Carlo; Hedges, S. Blair; Davidson, Ana D.; Costa, Gabriel C.

    2016-01-01

    The taxonomic, phylogenetic and trait dimensions of beta diversity each provide us unique insights into the importance of historical isolation and environmental conditions in shaping global diversity. These three dimensions should, in general, be positively correlated. However, if similar environmental conditions filter species with similar trait values, then assemblages located in similar environmental conditions, but separated by large dispersal barriers, may show high taxonomic, high phylogenetic, but low trait beta diversity. Conversely, we expect lower phylogenetic diversity, but higher trait biodiversity among assemblages that are connected but are in differing environmental conditions. We calculated all pairwise comparisons of approximately 110 × 110 km grid cells across the globe for more than 5000 mammal species (approx. 70 million comparisons). We considered realms as units representing geographical distance and historical isolation and biomes as units with similar environmental conditions. While beta diversity dimensions were generally correlated, we highlight geographical regions of decoupling among beta diversity dimensions. Our analysis shows that assemblages from tropical forests in different realms had low trait dissimilarity while phylogenetic beta diversity was significantly higher than expected, suggesting potential convergent evolution. Low trait beta diversity was surprisingly not found between isolated deserts, despite harsh environmental conditions. Overall, our results provide evidence for parallel assemblage structure of mammal assemblages driven by environmental conditions at a global scale. PMID:27559061

  14. Temporal changes in aquatic-invertebrate and fish assemblages in streams of the north-central and northeastern U.S.

    USGS Publications Warehouse

    Kennen, Jonathan G.; Sullivan, Daniel J.; May, Jason T.; Bell, Amanda H.; Beaulieu, Karen M.; Rice, Donald E.

    2012-01-01

    Many management agencies seek to evaluate temporal changes in aquatic assemblages at monitoring sites, but few have sites with ecological time series that are long enough for this purpose. Trends in aquatic-invertebrate and fish assemblage composition were assessed at 27 long-term monitoring sites in the north-central and northeastern United States. Temporal changes were identified using serial trend analysis. Sites with significant serial trends were further evaluated by relating explanatory environmental variables (e.g., streamflow, habitat, and water chemistry) to changes in assemblage composition. Significant trends were found at 19 of 27 study sites; however, differences in the sensitivity of the aquatic fauna to environmental stressors were identified. For example, significant trends in fish assemblages were found at more sites (15 of 27) than for aquatic-invertebrate assemblages (10 of 27 sites). In addition, trends in the invertebrate assemblage were most often explained by changes in streamflow processes (e.g., duration and magnitude of low- and high-flows, streamflow variability, and annual rates of change), whereas trends in the fish assemblage were more related to changes in water chemistry. Results illustrate the value of long-term monitoring for the purpose of assessing temporal trends in aquatic assemblages. The ability to detect trends in assemblage composition and to attribute these changes to environmental factors is necessary to understand mechanistic pathways and to further our understanding of how incremental anthropogenic alterations modify aquatic assemblages over time. Finally, this study's approach to trends analysis can be used to better inform the design of monitoring programs as well as support the ongoing management needs of stakeholders, water-resource agencies, and policy makers.

  15. Historic changes in fish assemblage structure in midwestern nonwadeable rivers

    USGS Publications Warehouse

    Parks, Timothy P.; Quist, Michael C.; Pierce, Clay L.

    2014-01-01

    Historical change in fish assemblage structure was evaluated in the mainstems of the Des Moines, Iowa, Cedar, Wapsipinicon, and Maquoketa rivers, in Iowa. Fish occurrence data were compared in each river between historical and recent time periods to characterize temporal changes among 126 species distributions and assess spatiotemporal patterns in faunal similarity. A resampling procedure was used to estimate species occurrences in rivers during each assessment period and changes in species occurrence were summarized. Spatiotemporal shifts in species composition were analyzed at the river and river section scale using cluster analysis, pairwise Jaccard's dissimilarities, and analysis of multivariate beta dispersion. The majority of species exhibited either increases or declines in distribution in all rivers with the exception of several “unknown” or inconclusive trends exhibited by species in the Maquoketa River. Cluster analysis identified temporal patterns of similarity among fish assemblages in the Des Moines, Cedar, and Iowa rivers within the historical and recent assessment period indicating a significant change in species composition. Prominent declines of backwater species with phytophilic spawning strategies contributed to assemblage changes occurring across river systems.

  16. Modeling CO2-Water-Mineral Wettability and Mineralization for Carbon Geosequestration.

    PubMed

    Liang, Yunfeng; Tsuji, Shinya; Jia, Jihui; Tsuji, Takeshi; Matsuoka, Toshifumi

    2017-07-18

    Carbon dioxide (CO 2 ) capture and storage (CCS) is an important climate change mitigation option along with improved energy efficiency, renewable energy, and nuclear energy. CO 2 geosequestration, that is, to store CO 2 under the subsurface of Earth, is feasible because the world's sedimentary basins have high capacity and are often located in the same region of the world as emission sources. How CO 2 interacts with the connate water and minerals is the focus of this Account. There are four trapping mechanisms that keep CO 2 in the pores of subsurface rocks: (1) structural trapping, (2) residual trapping, (3) dissolution trapping, and (4) mineral trapping. The first two are dominated by capillary action, where wettability controls CO 2 and water two-phase flow in porous media. We review state-of-the-art studies on CO 2 /water/mineral wettability, which was found to depend on pressure and temperature conditions, salt concentration in aqueous solutions, mineral surface chemistry, and geometry. We then review some recent advances in mineral trapping. First, we show that it is possible to reproduce the CO 2 /water/mineral wettability at a wide range of pressures using molecular dynamics (MD) simulations. As the pressure increases, CO 2 gas transforms into a supercritical fluid or liquid at ∼7.4 MPa depending on the environmental temperature. This transition leads to a substantial decrease of the interfacial tension between CO 2 and reservoir brine (or pure water). However, the wettability of CO 2 /water/rock systems depends on the type of rock surface. Recently, we investigated the contact angle of CO 2 /water/silica systems with two different silica surfaces using MD simulations. We found that contact angle increased with pressure for the hydrophobic (siloxane) surface while it was almost constant for the hydrophilic (silanol) surface, in excellent agreement with experimental observations. Furthermore, we found that the CO 2 thin films at the CO 2 -hydrophilic

  17. Mangrove removal in the belize cays: effects on mangrove-associated fish assemblages in the intertidal and subtidal

    USGS Publications Warehouse

    Taylor, D.S.; Reyier, E.A.; Davis, W.P.; McIvor, C.C.

    2007-01-01

    We investigated the effects of mangrove cutting on fish assemblages in Twin Cays, Belize, in two habitat types. We conducted visual censuses at two sites in adjoining undisturbed/disturbed (30%–70% of shoreline fringe removed) sub-tidal fringing Rhizophora mangle Linnaeus, 1753. Observers recorded significantly more species and individuals in undisturbed sites, especially among smaller, schooling species (e.g., atherinids, clupeids), where densities were up to 200 times greater in undisturbed habitat. Multivariate analyses showed distinct species assemblages between habitats at both sites. In addition, extensive trapping with wire minnow traps within the intertidal zone in both undisturbed and disturbed fringing and transition (landward) mangrove forests was conducted. Catch rates were low: 638 individuals from 24 species over 563 trap-nights. Trap data, however, indicated that mangrove disturbance had minimal effect on species composition in either forest type (fringe/transition). Different results from the two methods (and habitat types) may be explained by two factors: (1) a larger and more detectable species pool in the subtidal habitat, with visual "access" to all species, and (2) the selective nature of trapping. Our data indicate that even partial clearing of shoreline and more landward mangroves can have a significant impact on local fish assemblages.

  18. Remote sensing of geologic mineral occurrences for the Colorado mineral belt using LANDSAT data

    NASA Technical Reports Server (NTRS)

    Carpenter, R. H. (Principal Investigator); Trexler, D. W.

    1976-01-01

    The author has identified the following significant results. LANDSAT imagery was examined as a practical and productive tool for mineral exploration along the Colorado Mineral Belt. An attempt was made to identify all large, active and/or abandoned mining districts on the imagery which initially were discovered by surface manifestations. A number of strong photolinements, circular features, and color anomalies were identified. Some of these form a part of the structural and igneous volcanic framework in which mineral deposits occur. No specific mineral deposits such as veins or porphyries were identified. Promising linear and concentric features were field checked at several locations. Some proved to be fault zones and calderas; others were strictly topographic features related to stream or glacial entrenchment. The Silverton Caldera region and the Idaho Springs-Central City district were chosen and studied as case histories to evaluate the application of LANDSAT imagery to mineral exploration. Evidence of specific mineralization related to ore deposits in these two areas were observed only on low level photography.

  19. Dynamics of avian haemosporidian assemblages through millennial time scales inferred from insular biotas of the West Indies

    PubMed Central

    Soares, Leticia; Latta, Steven C.; Ricklefs, Robert E.

    2017-01-01

    Although introduced hemosporidian (malaria) parasites (Apicomplexa: Haemosporida) have hastened the extinction of endemic bird species in the Hawaiian Islands and perhaps elsewhere, little is known about the temporal dynamics of endemic malaria parasite populations. Haemosporidian parasites do not leave informative fossils, and records of population change are lacking beyond a few decades. Here, we take advantage of the isolation of West Indian land-bridge islands by rising postglacial sea levels to estimate rates of change in hemosporidian parasite assemblages over a millennial time frame. Several pairs of West Indian islands have been connected and separated by falling and rising sea levels associated with the advance and retreat of Pleistocene continental glaciers. We use island isolation following postglacial sea-level rise, ca. 2.5 ka, to characterize long-term change in insular assemblages of hemosporidian parasites. We find that assemblages on formerly connected islands are as differentiated as assemblages on islands that have never been connected, and both are more differentiated than local assemblages sampled up to two decades apart. Differentiation of parasite assemblages between formerly connected islands reflects variation in the prevalence of shared hemosporidian lineages, whereas differentiation between islands isolated by millions of years reflects replacement of hemosporidian lineages infecting similar assemblages of avian host species. PMID:28607060

  20. Dynamics of avian haemosporidian assemblages through millennial time scales inferred from insular biotas of the West Indies.

    PubMed

    Soares, Leticia; Latta, Steven C; Ricklefs, Robert E

    2017-06-20

    Although introduced hemosporidian (malaria) parasites (Apicomplexa: Haemosporida) have hastened the extinction of endemic bird species in the Hawaiian Islands and perhaps elsewhere, little is known about the temporal dynamics of endemic malaria parasite populations. Haemosporidian parasites do not leave informative fossils, and records of population change are lacking beyond a few decades. Here, we take advantage of the isolation of West Indian land-bridge islands by rising postglacial sea levels to estimate rates of change in hemosporidian parasite assemblages over a millennial time frame. Several pairs of West Indian islands have been connected and separated by falling and rising sea levels associated with the advance and retreat of Pleistocene continental glaciers. We use island isolation following postglacial sea-level rise, ca. 2.5 ka, to characterize long-term change in insular assemblages of hemosporidian parasites. We find that assemblages on formerly connected islands are as differentiated as assemblages on islands that have never been connected, and both are more differentiated than local assemblages sampled up to two decades apart. Differentiation of parasite assemblages between formerly connected islands reflects variation in the prevalence of shared hemosporidian lineages, whereas differentiation between islands isolated by millions of years reflects replacement of hemosporidian lineages infecting similar assemblages of avian host species.

  1. Mineral complexities as evidence for open-system processes in intermediate magmas of the Mount Baker volcanic field, northern Cascade arc

    NASA Astrophysics Data System (ADS)

    Escobar-Burciaga, R. D.; DeBari, S. M.

    2015-12-01

    The petrogenesis of intermediate magmas in arcs is a critical contribution to crustal growth. Andesites are commonly thought of as a hybrid product, the result of two endmember magmas mixing. At the Mount Baker volcanic field (MBVF), northern Cascade arc, andesites are the predominantly erupted lavas since 1 Ma and yet their origin is poorly constrained. Previous studies have suggested that open-system processes play a dominant role. However, the studies rely heavily on bulk rock compositions and overlook complex mineral textures and compositions. To better understand the complex processes at work at MBVF, we focus on establishing mineral and crystal clot populations in three andesitic flow units (55-59% SiO2). Petrographic and geochemical analyses suggest that variable-composition crystal clot and phenocryst populations in a single flow are related. We interpret the crystal clots to represent cumulates entrained in the erupting host magma and that related phenocrysts are disaggregates of crystal clots. The existence of common, multiple phenocryst and crystal clot populations in each flow of different age and SiO2 content provides strong evidence that intermediate magmas of MBVF are more than just the end product of mixing between two magmas. Furthermore, we suggest that most phenocrysts do not represent equilibrium products of their host liquid, evident from wide compositional ranges of ferromagnesian minerals (e.g. augite core Mg# 70-87). In fact, the most primitive phenocryst populations show the least amount of disequilibrium texture but represent assemblages expected to fractionate from basaltic to basaltic-andesitic liquids rather than equilibrium assemblages from their host bulk rock "liquid" composition. As a result, we interpret the variable SiO2 signature of the three andesitic flow units to have been obtained through the incorporation of cumulates/liquids as basaltic to basaltic-andesitic magma ascends.

  2. Dissolution Rates and Mineral Lifetimes of Phosphate Containing Minerals and Implications for Mars

    NASA Astrophysics Data System (ADS)

    Adcock, C. T.; Hausrath, E.

    2011-12-01

    The objectives of NASA's Mars Exploration Program include exploring the planet's habitability and the possibility of past, present, or future life. This includes investigating "possible supplies of bioessential elements" [1]. Phosphate is one such bioessential element for life as we understand it. Phosphate is also abundant on Mars [2], and the phosphate rich minerals chlorapatite, fluorapatite, and merrillite have been observed in Martian meteorites [3]. Surface rock analyses from the MER Spirit also show the loss of a phosphate rich mineral from the rocks Wishstone and Watchtower at Gusev Crater [4,5], implying mineral dissolution. Dissolution rates of phosphate containing minerals are therefore important for characterizing phosphate mobility and bioavailability on Mars. Previous studies have measured dissolution rates of fluorapatite [6-8]. However, chlorapatite and merrillite (a non-terrestrial mineral similar to whitlockite) are more common phosphate minerals found in Martian meteorites [3], and few dissolution data exist for these minerals. We have begun batch dissolution experiments on chlorapatite, synthesized using methods of [9], and whitlockite, synthesized using a method modified from [10]. Additionally, we are dissolving Durango fluorapatite to compare to dissolution rates in literature, and natural Palermo whitlockite to compare to dissolution rates of our synthesized whitlockite. Batch dissolution experiments were performed after [8], using a 0.01 molar KNO3 solution with 0.1500g-0.3000g mineral powders and starting solution volumes of 180ml in LDPE reaction vessels. HNO3 or KOH were used to adjust initial pH as required. Dissolution rates are calculated from the rate of change of elemental concentration in solution as a function of time, and normalized to the mineral surface area as measured by BET. Resulting rates will be used to calculate mineral lifetimes for the different phosphate minerals under potential Mars-like aqueous conditions, and in

  3. Sponge assemblages on the deep Mediterranean continental shelf and slope (Menorca Channel, Western Mediterranean Sea)

    NASA Astrophysics Data System (ADS)

    Santín, Andreu; Grinyó, Jordi; Ambroso, Stefano; Uriz, Maria J.; Gori, Andrea; Dominguez-Carrió, Carlos; Gili, Josep-Maria

    2018-01-01

    Sponge assemblages on continental shelves and slopes around the world have been known about for centuries. However, due to limitations of the traditional sampling systems, data about individual sponge species rather than assemblages have been reported. This study characterizes sponge assemblages over a wide bathymetric range ( 50-350 m depth) and covering the entire continental shelf and the upper slope of the Menorca Channel, an area soon to be declared a Marine Protected Area (MPA) as part of the Natura 2000 Network. Quantitative analysis of 85 video-transects (a total linear distance of 75 km), together with representative collections to confirm species identifications, allowed us to discriminate six major assemblages. Differences in the assemblages mainly corresponded to differences in substrate type and depth. On the inner continental shelf, a semi-sciaphilous Axinellid assemblage dominated the rocky outcrops. Maërl beds on the inner continental shelf were dominated by Haliclona (Reniera) mediterranea, whereas the horny sponge Aplysina cavernicola and several other haliclonids mostly dominated maërl beds and rocky substrates of the outer shelf. Soft sediments on the shelf break hosted a monospecific Thenea muricata assemblage, whereas rocky substrates of the shelf break were characterized by a mixture of encrusting, columnar and fan-shaped sponges. Finally, the upper slope was dominated by Hamacantha (Vomerula) falcula and the hexactinellid Tretodictyum reiswigi. Overall, sponge diversity showed its highest values above the shelf break, plummeting severely on the upper slope. Despite this diversity decrease, we found very high densities (> 70 ind./m2) of sponges over vast areas of both the shelf break and the upper slope.

  4. Benthic invertebrate assemblages and their relation to physical and chemical characteristics of streams in the Eastern Iowa Basins, 1996-98

    USGS Publications Warehouse

    Brigham, Allison R.; Sadorf, Eric M.

    2001-01-01

    Stream size, a reflection of basin area, was a principal influence in categorizing the benthic invertebrate assemblages, with sites that have the largest basin areas forming a separate group. Although it is difficult to distinguish among the contributions of large basin area, increased concentrations of nutrients and pesticides, and decreasing instream habitat diversity, the resulting invertebrate assemblage described was distinct. The remaining sites were headwater or tributary streams that reflected conditions more common to smaller streams, such as higher gradients and the potential for more diverse or extensive riparian habitat, but were distinguished by landform. Following basin area in importance, landform contributed to the differences observed among the benthic invertebrate communities at the remaining sites.

  5. Origin of Zn-Pb-Sb-Au mineralization adjacent to the Paleoproterozoic Boliden Au-rich VMS deposit, Sweden: evidence from petrographic and oxygen isotope characteristics

    NASA Astrophysics Data System (ADS)

    Adomako-Ansah, Kofi; Ishiyama, Daizo; Allen, Rodney

    2018-06-01

    Adjacent to the world-class Boliden deposit, fine- to coarse-grained Zn-Pb-Sb-Au-rich sulfide-sulfosalt-bearing horizons occur within the base of a metasedimentary succession that has previously been regarded to stratigraphically overlie the Skellefte Volcanics and Boliden deposit. The metasedimentary succession comprises interbedded mudstone and normal-graded crystal-rich volcanic sandstone-siltstone units, interpreted to be low-density turbidity currents in a subaqueous environment below wave base. The sharp contact between the mineralized intervals and volcanic sandstone is concordant to the bedding planes and compaction foliation. Above and below the mineralization, the wall rocks contain well-preserved plagioclase crystals, partly enclosed by a weak alteration composed of bedding-parallel metamorphic biotite±sericite minerals. These observations are consistent with burial (or tectonic) compaction and diagenetic alteration that was overprinted by metamorphic biotite. The occurrence of biotite in the wall rocks and homogenization recrystallization of the sulfide-sulfosalt assemblage in the mineralized intervals are consistent with peak metamorphic conditions ( 350-450 °C, < 4 kbars) in the Boliden area. However, preservation of plagioclase and water-rock interaction under rock-dominant conditions suggest that high δ18O values (+ 10.7 to + 13.5‰) acquired during diagenesis were unchanged by the metamorphic overprint. The δ18O values yield low temperatures (< 150 °C), which indicate pre-metamorphic conditions. These data suggest that the Zn-Pb-Sb-Au-rich intervals formed as pre-metamorphic distal syn-volcanic exhalative mineralization during sedimentation of the Vargfors group metasedimentary rocks. This implies that massive sulfide formation continued even during Vargfors group time and, therefore, there is still potential for discovery of gold-rich base-metal ores in this part of the Skellefte field stratigraphy.

  6. Mapping playa evaporite minerals with AVIRIS data: A first report from death valley, California

    USGS Publications Warehouse

    Crowley, J.K.

    1993-01-01

    Efflorescent salt crusts in Death Valley, California, were mapped by using Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data and a recently developed least-squares spectral band-fitting algorithm. Eight different saline minerals were remotely identified, including three borates, hydroboracite, pinnoite, and rivadavite, that have not been previously reported from the Death Valley efflorescent crusts. The three borates are locally important phases in the crusts, and at least one of the minerals, rivadavite, appears to be forming directly from brine. Borates and other evaporite minerals provide a basis for making remote chemical measurements of desert hydrologic systems. For example, in the Eagle Borax Spring area, the AVIRIS mineral maps pointed to elevated magnesium and boron levels in the ground waters, and to the action of chemical divides causing subsurface fractionation of calcium. Many other chemical aspects of playa brines should have an expression in the associated evaporite assemblages. Certain anhydrous evaporites, including anhydrite, glauberite, and thenardite, lack absorption bands in the visible and near-infrared wavelength range, and crusts composed of these minerals could not be characterized by using AVIRIS. In these situations, thermal-infrared remote sensing data may complement visible and near-infrared data for mapping evaporites. Another problem occurred in wet areas of Death Valley, where water absorption caused low signal levels in the 2.0-2.5 ??m wavelength region that obscured any spectral features of evaporite minerals. Despite these difficulties, the results of this study demonstrate the potential for using AVIRIS and other imaging spectrometer data to study playa chemistry. Such data can be useful for understanding chemical linkages between evaporites and ground waters, and will facilitate studies of how desert ground-water regimes change through time in response to climatic and other variables. ?? 1993.

  7. Evaluation of accessible mineral surface areas for improved prediction of mineral reaction rates in porous media

    NASA Astrophysics Data System (ADS)

    Beckingham, Lauren E.; Steefel, Carl I.; Swift, Alexander M.; Voltolini, Marco; Yang, Li; Anovitz, Lawrence M.; Sheets, Julia M.; Cole, David R.; Kneafsey, Timothy J.; Mitnick, Elizabeth H.; Zhang, Shuo; Landrot, Gautier; Ajo-Franklin, Jonathan B.; DePaolo, Donald J.; Mito, Saeko; Xue, Ziqiu

    2017-05-01

    The rates of mineral dissolution reactions in porous media are difficult to predict, in part because of a lack of understanding of mineral reactive surface area in natural porous media. Common estimates of mineral reactive surface area used in reactive transport models for porous media are typically ad hoc and often based on average grain size, increased to account for surface roughness or decreased by several orders of magnitude to account for reduced surface reactivity of field as opposed to laboratory samples. In this study, accessible mineral surface areas are determined for a sample from the reservoir formation at the Nagaoka pilot CO2 injection site (Japan) using a multi-scale image analysis based on synchrotron X-ray microCT, SEM QEMSCAN, XRD, SANS, and FIB-SEM. This analysis not only accounts for accessibility of mineral surfaces to macro-pores, but also accessibility through connected micro-pores in smectite, the most abundant clay mineral in this sample. While the imaging analysis reveals that most of the micro- and macro-pores are well connected, some pore regions are unconnected and thus inaccessible to fluid flow and diffusion. To evaluate whether mineral accessible surface area accurately reflects reactive surface area a flow-through core experiment is performed and modeled at the continuum scale. The core experiment is performed under conditions replicating the pilot site and the evolution of effluent solutes in the aqueous phase is tracked. Various reactive surface area models are evaluated for their ability to capture the observed effluent chemistry, beginning with parameter values determined as a best fit to a disaggregated sediment experiment (Beckingham et al., 2016) described previously. Simulations that assume that all mineral surfaces are accessible (as in the disaggregated sediment experiment) over-predict the observed mineral reaction rates, suggesting that a reduction of RSA by a factor of 10-20 is required to match the core flood

  8. Hydrothermal barite mineralization at Chenarvardeh deposit, Markazi Province, Iran: Evidences from REE geochemistry and fluid inclusions

    NASA Astrophysics Data System (ADS)

    Ehya, Farhad; Mazraei, Shaghayegh Moalaye

    2017-10-01

    Barite mineralization occurs at Chenarvardeh deposit as layers and lenses in Upper Eocene volcanic and pyroclastic rocks. The host rocks are intensely saussuritized in most places. Barite is accompanied by calcite, Mn-oxides, galena and malachite as subordinate minerals. The amount of Sr in barites is low and varies between 0.11 and 0.30 wt%. The concentration of Rb, Zr, Y, Ta and Hf is also low (<5 ppm) in barite samples. The amount of total REEs (∑REE) is low in barites, ranging from 7.51 to 30.50 ppm. Chondrite-normalized REE patterns reveal LREE enrichment with respect to HREE, and positive Ce anomalies. Fluid inclusions are common in barite samples, being dominantly from liquid-rich two phase (L + V) type. Salinity values in fluid inclusions range from 9.41 to 18.69 wt% NaCl equivalent with most frequent salinities falling in the range of 10-15 wt% NaCl equivalent. Homogenization temperatures (Th) range between 160 and 220 °C, being the 180-200 °C range as the most common Th interval. A combination of factors, including geologic setting, host rock, mineral assemblages, REE geochemistry and fluid inclusion data are consistent with a submarine volcanic hydrothermal model for barite formation at the Chenarvardeh deposit. Mineral-forming fluids originated from solutions related to submarine hydrothermal activities deposited barite on seafloor as they encountered sulfate-bearing seawater.

  9. Palynofacies assemblages reflect sources of organic matter in New Zealand fjords

    NASA Astrophysics Data System (ADS)

    Prebble, Joseph G.; Hinojosa, Jessica L.; Moy, Christopher M.

    2018-02-01

    Understanding sources and transport pathways of organic carbon in fjord systems is important to quantify carbon cycling in coastal settings. Provenance of surficial sediment organic carbon in Fiordland National Park (southwestern New Zealand) has previously been estimated using a range of techniques, including mixing models derived from stable isotopes and lipid biomarker distributions. Here, we present the first application of palynofacies to explore the sources of particulate organic carbon to five fjords along the SW margin of New Zealand, to further discriminate the provenance of organic carbon in the fjords. We find good correlation between isotopic-and biomarker-derived proxies for organic carbon provenance and our new palynofacies observations. We observe strong down-fjord gradients of decreasing terrestrially derived organic carbon further from the river inflow at fjord heads. Fjords with small catchments and minor fresh water inflow exhibit reversed gradients, indicating that volume of freshwater entering at the fjord head is a primary mechanism to transport particulates down fjord rather than local transport from fjord sides. The palynofacies data also confirmed previously recorded latitudinal trends (i.e. between fjords), of less frequent and more weathered terrestrially derived organic carbon in the southern fjords, consistent with enhanced marine inflow and longer transport times in the southern catchments. Dinocyst assemblages also exhibit a strong latitudinal gradient, with assemblages dominated by heterotrophic forms in the north. In addition to providing support for previous studies, this approach allows finer discrimination of terrestrial organic carbon than previously, for example variation of leaf material. This study demonstrates that visual palynofacies analysis is a valuable tool to pinpoint origins of organic carbon in fjord systems, providing different but complementary information to other proxies.

  10. Ecological release in lizard assemblages of neotropical savannas.

    PubMed

    Mesquita, Daniel Oliveira; Colli, Guarino Rinaldi; Vitt, Laurie J

    2007-08-01

    We compare lizard assemblages of Cerrado and Amazonian savannas to test the ecological release hypothesis, which predicts that niche dimensions and abundance should be greater in species inhabiting isolated habitat patches with low species richness (Amazonian savannas and isolated Cerrado patches) when compared with nonisolated areas in central Cerrado with greater species richness. We calculated microhabitat and diet niche breadths with data from 14 isolated Cerrado patches and Amazon savanna areas and six central Cerrado populations. Morphological data were compared using average Euclidean distances, and lizard abundance was estimated using the number of lizards captured in pitfall traps over an extended time period. We found no evidence of ecological release with respect to microhabitat use, suggesting that historical factors are better microhabitat predictors than ecological factors. However, data from individual stomachs indicate that ecological release occurs in these areas for one species (Tropidurus) but not others (Ameiva ameiva, Anolis, Cnemidophorus, and Micrablepharus), suggesting that evolutionary lineages respond differently to environmental pressures, with tropidurids being more affected by ecological factors than polychrotids, teiids, and gymnophthalmids. We found no evidence that ecological release occurs in these areas using morphological data. Based on abundance data, our results indicate that the ecological release (density compensation) hypothesis is not supported: lizard species are not more abundant in isolated areas than in nonisolated areas. The ecology of species is highly conservative, varying little from assemblage to assemblage. Nevertheless, increases in niche breadth for some species indicate that ecological release occurs as well.

  11. New Early Jurassic Tetrapod Assemblages Constrain Triassic-Jurassic Tetrapod Extinction Event

    NASA Astrophysics Data System (ADS)

    Olsen, P. E.; Shubin, N. H.; Anders, M. H.

    1987-08-01

    The discovery of the first definitively correlated earliest Jurassic (200 million years before present) tetrapod assemblage (Fundy basin, Newark Supergroup, Nova Scotia) allows reevaluation of the duration of the Triassic-Jurassic tetrapod extinction event. Present are tritheledont and mammal-like reptiles, prosauropod, theropod, and ornithischian dinosaurs, protosuchian and sphenosuchian crocodylomorphs, sphenodontids, and hybodont, semionotid, and palaeonisciform fishes. All of the families are known from Late Triassic and Jurassic strata from elsewhere; however, pollen and spore, radiometric, and geochemical correlation indicate an early Hettangian age for these assemblages. Because all ``typical Triassic'' forms are absent from these assemblages, most Triassic-Jurassic tetrapod extinctions occurred before this time and without the introduction of new families. As was previously suggested by studies of marine invertebrates, this pattern is consistent with a global extinction event at the Triassic-Jurassic boundary. The Manicouagan impact structure of Quebec provides dates broadly compatible with the Triassic-Jurassic boundary and, following the impact theory of mass extinctions, may be implicated in the cause.

  12. Mesophotic and Deep-sea Demersal Fish Assemblages on Rugged Hardbottoms of the Greater-Lesser Antilles Transition Zone

    NASA Astrophysics Data System (ADS)

    Quattrini, A.; Chaytor, J. D.; Demopoulos, A. W.

    2016-02-01

    Caribbean fish communities in shallow waters have been well studied along the Greater and Lesser Antilles for decades; however, the mesophotic (>50 m) and deep (>200 m) assemblages remain poorly known due to the technical challenges associated with surveying greater depths. Numerous seafloor features (e.g., seamounts, island ridges, banks) punctuate the insular margins and increase habitat heterogeneity, which may lead to enhanced diversity of the deeper demersal fish community in the region. Recent (2013-2015) expeditions in the area using the E/Vs Nautilus and Okeanos Explorer and ROVs Hercules and Deep Discoverer surveyed fish communities during 18 dives across different seafloor features at depths ranging from 64 to 2944 m. These surveys enabled us to investigate whether demersal fish assemblages differed among these seafloor features and/or in response to other (e.g., dissolved oxygen, microhabitat) abiotic factors. A totla of 3,532 fishes representing at least 140 species in 53 families were documented. Assemblage differences were primarily influenced by depth, but differences in microhabitat (i.e., soft substrate, profile, slope) further influenced assemblage structure. Several range and depth extensions were documented. The morid Lepidion sp., previously known only from the eastern and the western North Atlantic, was documented on Norôit Seamount. A new species of labrid, Polylepion sp. A, known only from Curacao, was documented on Conrad Seamount. Many mesophotic reef species were observed deeper than previously known, including the butterflyfishes Chaetodon sedentarius and Prognathodes aculeatus. This study further supports the importance of environmental conditions, particularly depth and microhabitat, influencing local-scale distribution of demersal fishes, while demonstrating how little is still known about the biogeography of numerous deep-sea and mesophotic species.

  13. GOCE observations for Mineral exploration in Africa and across continents

    NASA Astrophysics Data System (ADS)

    Braitenberg, Carla

    2014-05-01

    identify common geologic units that extend across both the now-separate continents. Tracing the geologic units is important for mineral exploration, which is demonstrated with the analysis of correlations of the gravity signal with selected classes of mineral occurrences, for instance those associated to Greenstone belts. Alvarez, O., Gimenez M., Braitenberg C., Folguera, A. (2012) GOCE Satellite derived Gravity and Gravity gradient corrected for topographic effect in the South Central Andes Region. Geophysical Journal International, 190, 941-959, doi: 10.1111/j.1365-246X.2012.05556.x Braitenberg C., Mariani P., De Min A. (2013) The European Alps and nearby orogenic belts sensed by GOCE, Boll. Bollettino di Geofisica Teorica ed Applicata, doi:10.4430/bgta0105 Braitenberg C. (2014) Exploration of tectonic structures with GOCE in Africa and across-continents, J.of Applied Earth Observation and Geoinformation (in Review). Mariani P., Braitenberg C., Ussami N. (2013). Explaining the thick crust in Parana' basin, Brazil, with satellite GOCE-gravity observations. Journal of South American Earth Sciences, 45, 209-223, doi:10.1016/j.jsames.2013.03.008.

  14. Brine Assemblages of Ultrasmall Microbial Cells within the Ice Cover of Lake Vida, Antarctica

    PubMed Central

    Kuhn, Emanuele; Ichimura, Andrew S.; Peng, Vivian; Fritsen, Christian H.; Trubl, Gareth; Doran, Peter T.

    2014-01-01

    The anoxic and freezing brine that permeates Lake Vida's perennial ice below 16 m contains an abundance of very small (≤0.2-μm) particles mixed with a less abundant population of microbial cells ranging from >0.2 to 1.5 μm in length. Fluorescent DNA staining, electron microscopy (EM) observations, elemental analysis, and extraction of high-molecular-weight genomic DNA indicated that a significant portion of these ultrasmall particles are cells. A continuous electron-dense layer surrounding a less electron-dense region was observed by EM, indicating the presence of a biological membrane surrounding a cytoplasm. The ultrasmall cells are 0.192 ± 0.065 μm, with morphology characteristic of coccoid and diplococcic bacterial cells, often surrounded by iron-rich capsular structures. EM observations also detected the presence of smaller unidentified nanoparticles of 0.020 to 0.140 μm among the brine cells. A 16S rRNA gene clone library from the brine 0.1- to 0.2-μm-size fraction revealed a relatively low-diversity assemblage of Bacteria sequences distinct from the previously reported >0.2-μm-cell-size Lake Vida brine assemblage. The brine 0.1- to 0.2-μm-size fraction was dominated by the Proteobacteria-affiliated genera Herbaspirillum, Pseudoalteromonas, and Marinobacter. Cultivation efforts of the 0.1- to 0.2-μm-size fraction led to the isolation of Actinobacteria-affiliated genera Microbacterium and Kocuria. Based on phylogenetic relatedness and microscopic observations, we hypothesize that the ultrasmall cells in Lake Vida brine are ultramicrocells that are likely in a reduced size state as a result of environmental stress or life cycle-related conditions. PMID:24727273

  15. Brine assemblages of ultrasmall microbial cells within the ice cover of Lake Vida, Antarctica.

    PubMed

    Kuhn, Emanuele; Ichimura, Andrew S; Peng, Vivian; Fritsen, Christian H; Trubl, Gareth; Doran, Peter T; Murray, Alison E

    2014-06-01

    The anoxic and freezing brine that permeates Lake Vida's perennial ice below 16 m contains an abundance of very small (≤0.2-μm) particles mixed with a less abundant population of microbial cells ranging from >0.2 to 1.5 μm in length. Fluorescent DNA staining, electron microscopy (EM) observations, elemental analysis, and extraction of high-molecular-weight genomic DNA indicated that a significant portion of these ultrasmall particles are cells. A continuous electron-dense layer surrounding a less electron-dense region was observed by EM, indicating the presence of a biological membrane surrounding a cytoplasm. The ultrasmall cells are 0.192 ± 0.065 μm, with morphology characteristic of coccoid and diplococcic bacterial cells, often surrounded by iron-rich capsular structures. EM observations also detected the presence of smaller unidentified nanoparticles of 0.020 to 0.140 μm among the brine cells. A 16S rRNA gene clone library from the brine 0.1- to 0.2-μm-size fraction revealed a relatively low-diversity assemblage of Bacteria sequences distinct from the previously reported >0.2-μm-cell-size Lake Vida brine assemblage. The brine 0.1- to 0.2-μm-size fraction was dominated by the Proteobacteria-affiliated genera Herbaspirillum, Pseudoalteromonas, and Marinobacter. Cultivation efforts of the 0.1- to 0.2-μm-size fraction led to the isolation of Actinobacteria-affiliated genera Microbacterium and Kocuria. Based on phylogenetic relatedness and microscopic observations, we hypothesize that the ultrasmall cells in Lake Vida brine are ultramicrocells that are likely in a reduced size state as a result of environmental stress or life cycle-related conditions.

  16. Fish assemblage production estimates in Appalachian streams across a latitudinal and temperature gradient

    Treesearch

    Bonnie J.E. Myers; C. Andrew Dolloff; Jackson R. Webster; Keith H. Nislow; Brandon Fair; Andrew L. Rypel

    2017-01-01

    Production of biomass is central to the ecology and sustainability of fish assemblages. The goal of this study was to empirically estimate and compare fish assemblage production, production-to-biomass (P/B) ratios and species composition for 25 second- to third-order streams spanning the Appalachian Mountains (from Vermont to North Carolina) that vary in their...

  17. Diversity, abundance, and size structure of bivalve assemblages in the Sipsey River, Alabama

    Treesearch

    Wendell R. Haag; Melvin L. Jr. Warren

    2010-01-01

    1. Patterns of mussel diversity and assemblage structure in the Sipsey River, Alabama, are described. Qualitative data were used to describe river-wide patterns of diversity. Quantitative data were used to describe the structure of mussel assemblages at several sites based on whole-substrate sampling that ensured all size classes were detected. 2. Major human impacts...

  18. Preliminary metallogenic belt and mineral deposit maps for northeast Asia

    USGS Publications Warehouse

    Obolenskiy, Alexander A.; Rodionov, Sergey M.; Dejidmaa, Gunchin; Gerel, Ochir; Hwang, Duk-Hwan; Distanov, Elimir G.; Badarch, Gombosuren; Khanchuk, Alexander I.; Ogasawara, Masatsugu; Nokleberg, Warren J.; Parfenov, Leonid M.; Prokopiev, Andrei V.; Seminskiy, Zhan V.; Smelov, Alexander P.; Yan, Hongquan; Birul'kin, Gennandiy V.; Davydov, Yuriy V.V.; Fridovskiy, Valeriy Yu.; Gamyanin, Gennandiy N.; Kostin, Alexei V.; Letunov, Sergey A.; Li, Xujun; Nikitin, Valeriy M.; Sotnikov, Sadahisa; Sudo, Vitaly I.; Spiridonov, Alexander V.; Stepanov, Vitaly A.; Sun, Fengyue; Sun, Jiapeng; Sun, Weizhi; Supletsov, Valeriy M.; Timofeev, Vladimir F.; Tyan, Oleg A.; Vetluzhskikh, Valeriy G.; Wakita, Koji; Yakovlev, Yakov V.; Zorina, Lydia M.

    2003-01-01

    The metallogenic belts and locations of major mineral deposits of Northeast Asia are portrayed on Sheets 1-4. Sheet 1 portrays the location of significant lode deposits and placer districts at a scale of 1:7,500,000. Sheets 2-4 portray the metallogenic belts of the region in a series of 12 time-slices from the Archean through the Quaternary at a scale of 1:15,000,000. For all four map sheets, a generalized geodynamics base map, derived from a more detailed map by Parfenov and others (2003), is used as an underlay for the metallogenic belt maps. This geodynamics map underlay permits depicts the major host geologic units and structures that host metallogenic belts. Four tables are included in this report. A hierarchial ranking of mineral deposit models is listed in Table 1. And summary features of lode deposits, placer districts, and metallogenic belts are described in Tables 2, 3, and 4, respectively. The metallogenic belts for Northeast Asia are synthesized, compiled, described, and interpreted with the use of modern concepts of plate tectonics, analysis of terranes and overlap assemblages, and synthesis of mineral deposit models. The data supporting the compilation are: (1) comprehensive descriptions of mineral deposits; (2) compilation and synthesis of a regional geodynamics map the region at 5 million scale with detailed explanations and cited references; and (3) compilation and synthesis of metallogenic belt maps at 15 million scale with detailed explanations and cited references. These studies are part of a major international collaborative study of the Mineral Resources, Metallogenesis, and Tectonics of Northeast Asia that is being conducted from 1997 through 2002 by geologists from earth science agencies and universities in Russia, Mongolia, Northeastern China, South Korea, Japan, and the USA. Companion studies and previous publications are: (1) a detailed geodynamics map of Northeast Asia (Parfenov and 2003); (2) a compilation of major mineral deposit

  19. Impacts of fishing and environmental factors driving changes on littoral fish assemblages in a subtropical oceanic island

    NASA Astrophysics Data System (ADS)

    Sangil, Carlos; Martín-García, Laura; Hernández, José Carlos; Concepción, Laura; Fernández, Raúl; Clemente, Sabrina

    2013-08-01

    The structure of demersal fish assemblages of commercial interest was studied at 51 sites on La Palma Island (Canary Islands, northeastern Atlantic). On this island, demersal fish populations are limited and independent from other islands. As deep water separates the islands and the shallow sublittoral platforms are not continuous, adult inter-island migrations are not possible except between the islands of Lanzarote and Fuerteventura. Otherwise, each island functions as a closed system, and the status of an island fish assemblage depends on local environmental conditions and activities performed in situ by the islanders. These circumstances provide a unique opportunity to test the intrainsular variability of fish assemblages. With this background, environmental parameters, fishing pressure and distance to the MPA were considered to identify the main factors explaining the spatial variation of fish assemblages off La Palma Island. Twenty-six fish species were recorded, but 60% of the total fish biomass was represented by only five species (Sparisoma cretense, Pomadasys incisus, Canthidermis sufflamen, Diplodus cervinus cervinus and Bodianus scrofa). However, the structure of assemblages was heterogeneous in response to different variables and showed substantial spatial variation. The assemblages were strongly modified by the presence of upright seaweed cover, fishing activities, and certain environmental variables. Differences were more pronounced in species that occupied the higher trophic levels. The most disturbed assemblages were those located in areas with lower upright seaweed cover and with higher fishing pressure, whereas the best-preserved assemblages corresponded to sites with controlled fishing activities, located within the MPA.

  20. Species traits and catchment-scale habitat factors influence the occurrence of freshwater mussel populations and assemblages

    USGS Publications Warehouse

    Pandolfo, Tamara J.; Kwak, Thomas J.; Cope, W. Gregory; Heise, Ryan J.; Nichols, Robert B.; Pacifici, Krishna

    2016-01-01

    Conservation of freshwater unionid mussels presents unique challenges due to their distinctive life cycle, cryptic occurrence and imperilled status. Relevant ecological information is urgently needed to guide their management and conservation.We adopted a modelling approach, which is a novel application to freshwater mussels to enhance inference on rare species, by borrowing data among species in a hierarchical framework to conduct the most comprehensive occurrence analysis for freshwater mussels to date. We incorporated imperfect detection to more accurately examine effects of biotic and abiotic factors at multiple scales on the occurrence of 14 mussel species and the entire assemblage of the Tar River Basin of North Carolina, U.S.A.The single assemblage estimate of detection probability for all species was 0.42 (95% CI, 0.36–0.47) with no species- or site-specific detection effects identified. We empirically observed 15 mussel species in the basin but estimated total species richness at 21 (95% CI, 16–24) when accounting for imperfect detection.Mean occurrence probability among species ranged from 0.04 (95% CI, 0.01–0.16) for Alasmidonta undulata, an undescribed Lampsilis sp., and Strophitus undulatus to 0.67 (95% CI, 0.42–0.86) for Elliptio icterina. Median occurrence probability among sites was <0.30 for all species with the exception of E. icterina. Site occurrence probability generally related to mussel conservation status, with reduced occurrence for endangered and threatened species.Catchment-scale abiotic variables (stream power, agricultural land use) and species traits (brood time, host specificity, tribe) influenced the occurrence of mussel assemblages more than reach- or microhabitat-scale features.Our findings reflect the complexity of mussel ecology and indicate that habitat restoration alone may not be adequate for mussel conservation. Catchment-scale management can benefit an entire assemblage, but species-specific strategies may be