Sample records for observed pattern determine

  1. Using Spider-Web Patterns To Determine Toxicity

    NASA Technical Reports Server (NTRS)

    Noever, David A.; Cronise, Raymond J.; Relwani, Rachna A.

    1995-01-01

    Method of determining toxicities of chemicals involves recording and analysis of spider-web patterns. Based on observation spiders exposed to various chemicals spin webs that differ, in various ways, from normal webs. Potential alternative to toxicity testing on higher animals.

  2. Observations of diffusion-limited aggregation-like patterns by atmospheric plasma jet

    NASA Astrophysics Data System (ADS)

    Chiu, Ching-Yang; Chu, Hong-Yu

    2017-11-01

    We report on the observations of diffusion-limited aggregation-like patterns during the thin film removal process by an atmospheric plasma jet. The fractal patterns are found to have various structures like dense branching and tree-like patterns. The determination of surface morphology reveals that the footprints of discharge bursts are not as random as expected. We propose a diffusion-limited aggregation model with a few extra requirements by analogy with the experimental results, and thereby present the beauty of nature. We show that the model simulates not only the shapes of the patterns similar to the experimental observations, but also the growing sequences of fluctuating, oscillatory, and zigzag traces.

  3. Dietary patterns of children and socioeconomical, behavioral and maternal determinants

    PubMed Central

    Villa, Julia Khéde Dourado; Santos, Thanise Sabrina Souza; Ribeiro, Andréia Queiroz; Silva, Angélica Ribeiro e; da Rocha Sant'Ana, Luciana Ferreira; Pessoa, Milene Cristine

    2015-01-01

    Abstract Objective: To identify dietary patterns of children and to verify their association with socio-economical, behavioral and maternal determinants. Methods: A cross-sectional study with a random sample of 328 children aged 8 and 9 years. Dietary intake was assessed by food records in three nonconsecutive days and measured in grams of food groups and nutrients. Factor analysis and subsequent orthogonal rotation (varimax) were used to determine dietary patterns. Ordinal logistic regression was used to assess associations between dietary patterns and the studied determinants. Results: Five dietary patterns were observed: “Traditional,” “Sweetened beverages and snacks,” “Monotonous,” “Healthy” and “Egg-dairy.” A higher maternal level of education was directly associated with “Sweetened beverages and snacks” and “Egg-dairy' standards. Low income children who were submitted to greater food restriction by parents/guardians followed the more “Traditional” standard, represented by the consumption of rice, beans, vegetables, cooked roots and tubers and red meat. The “Monotonous” pattern, represented by a high consumption of milk and chocolate powder, was most followed by children from the middle class. Children living in rural areas consumed more foods from the “Egg-dairy” pattern, when compared to those from the urban area. Conclusions: Dietary patterns of children were associated with family socioeconomic status, maternal level of education, practice of food restriction by parents/guardians and location of residence in urban or rural area. Better socioeconomic conditions contributed to a more nutritionally inadequate dietary pattern. PMID:26163945

  4. The Determination of Children's Knowledge of Global Lunar Patterns from Online Essays Using Text Mining Analysis

    ERIC Educational Resources Information Center

    Cheon, Jongpil; Lee, Sangno; Smith, Walter; Song, Jaeki; Kim, Yongjin

    2013-01-01

    The purpose of this study was to use text mining analysis of early adolescents' online essays to determine their knowledge of global lunar patterns. Australian and American students in grades five to seven wrote about global lunar patterns they had discovered by sharing observations with each other via the Internet. These essays were analyzed for…

  5. Maternal and child dietary patterns and their determinants in Nigeria.

    PubMed

    Nwaru, Bright I; Onyeka, Ifeoma N; Ndiokwelu, Chika; Esangbedo, Dorothy O; Ngwu, Elizabeth K; Okolo, Selina N

    2015-07-01

    Understanding the overall dietary patterns of a population is a key step in initiating appropriate nutritional interventions and policies. Studies characterising the dietary patterns of Nigerian mothers and children are lacking. Complete dietary data for 13,566 mothers and their 13,506 children were analysed from the 2008 Nigerian Demographic and Health Surveys (NDHS), a nationally representative sample, to identify the overall maternal and child dietary patterns and to study the potential determinants of such dietary patterns. The 2008 NDHS included questions that inquired about the food items mothers and their children had consumed during the 24 h preceding the day of the interview. Factor analysis with the principal component procedure was used to construct the dietary patterns, and multiple multilevel logistic regression was used to investigate the determinants of the dietary patterns. Four ('mixed', 'traditional', 'staple foods and milk products' and 'beverages') and five ('mixed', 'selective', 'beverages and candies', 'gruels, grains and semi-solids' and 'infant formula and cereals') distinct dietary patterns were obtained for the mothers and children, respectively. The key determinants of both maternal and child dietary patterns were month of interview, religion, region of residence, maternal education, maternal occupation, wealth index and maternal body mass index. Marital status additionally predicted maternal patterns, while sex of the child, number of siblings, child's age, maternal age and place of residence additionally determined the child's patterns. This study has identified four and five different dietary patterns to characterise the dietary habits of Nigerian mothers and their children, respectively, and has shown the important socio-economic/demographic factors influencing the dietary patterns, which can guide appropriate nutritional interventions among Nigerian mothers and children. © 2012 Blackwell Publishing Ltd.

  6. Time-sequential observation of spindle and phragmoplast orientation in BY-2 cells with altered cortical actin microfilament patterning.

    PubMed

    Kojo, Kei H; Yasuhara, Hiroki; Hasezawa, Seiichiro

    2014-01-01

    Precise division plane determination is essential for plant development. At metaphase, a dense actin microfilament meshwork appears on both sides of the cell center, forming a characteristic cortical actin microfilament twin peak pattern in BY-2 cells. We previously reported a strong correlation between altered cortical actin microfilament patterning and an oblique mitotic spindle orientation, implying that these actin microfilament twin peaks play a role in the regulation of mitotic spindle orientation. In the present study, time-sequential observation was used to reveal the progression from oblique phragmoplast to oblique cell plate orientation in cells with altered cortical actin microfilament patterning. In contrast to cells with normal actin microfilament twin peaks, oblique phragmoplast reorientation was rarely observed in cells with altered cortical actin microfilament patterning. These results support the important roles of cortical actin microfilament patterning in division plane orientation.

  7. Time-sequential observation of spindle and phragmoplast orientation in BY-2 cells with altered cortical actin microfilament patterning.

    PubMed

    Kojo, Kei H; Yasuhara, Hiroki; Hasezawa, Seiichiro

    2014-06-18

    Precise division plane determination is essential for plant development. At metaphase, a dense actin microfilament meshwork appears on both sides of the cell center, forming a characteristic cortical actin microfilament twin peak pattern in BY-2 cells. We previously reported a strong correlation between altered cortical actin microfilament patterning and an oblique mitotic spindle orientation, implying that these actin microfilament twin peaks play a role in the regulation of mitotic spindle orientation. In the present study, time-sequential observation was used to reveal the progression from oblique phragmoplast to oblique cell plate orientation in cells with altered cortical actin microfilament patterning. In contrast to cells with normal actin microfilament twin peaks, oblique phragmoplast reorientation was rarely observed in cells with altered cortical actin microfilament patterning. These results support the important roles of cortical actin microfilament patterning in division plane orientation.

  8. Spatial pattern of Baccharis platypoda shrub as determined by sex and life stages

    NASA Astrophysics Data System (ADS)

    Fonseca, Darliana da Costa; de Oliveira, Marcio Leles Romarco; Pereira, Israel Marinho; Gonzaga, Anne Priscila Dias; de Moura, Cristiane Coelho; Machado, Evandro Luiz Mendonça

    2017-11-01

    Spatial patterns of dioecious species can be determined by their nutritional requirements and intraspecific competition, apart from being a response to environmental heterogeneity. The aim of the study was to evaluate the spatial pattern of populations of a dioecious shrub reporting to sex and reproductive stage patterns of individuals. Sampling was carried out in three areas located in the meridional portion of Serra do Espinhaço, where in individuals of the studied species were mapped. The spatial pattern was determined through O-ring analysis and Ripley's K-function and the distribution of individuals' frequencies was verified through x2 test. Populations in two areas showed an aggregate spatial pattern tending towards random or uniform according to the observed scale. Male and female adults presented an aggregate pattern at smaller scales, while random and uniform patterns were verified above 20 m for individuals of both sexes of the areas A2 and A3. Young individuals presented an aggregate pattern in all areas and spatial independence in relation to adult individuals, especially female plants. The interactions between individuals of both genders presented spatial independence with respect to spatial distribution. Baccharis platypoda showed characteristics in accordance with the spatial distribution of savannic and dioecious species, whereas the population was aggregated tending towards random at greater spatial scales. Young individuals showed an aggregated pattern at different scales compared to adults, without positive association between them. Female and male adult individuals presented similar characteristics, confirming that adult individuals at greater scales are randomly distributed despite their distinct preferences for environments with moisture variation.

  9. Where Do I Look? Preservice Teachers' Classroom Observation Patterns

    ERIC Educational Resources Information Center

    Young, Teresa; Bender-Slack, Delane

    2011-01-01

    During field experiences, preservice teachers are typically required to observe mentor teachers in schools, but what exactly are they seeing? This research examined the patterns and variations that existed with regard to preservice teachers' classroom observations during recent field experiences. Data were collected from 24 preservice teachers…

  10. Evaluation of camouflage pattern performance of textiles by human observers and CAMAELEON

    NASA Astrophysics Data System (ADS)

    Heinrich, Daniela H.; Selj, Gorm K.

    2017-10-01

    Military textiles with camouflage pattern are an important part of the protection measures for soldiers. Military operational environments differ a lot depending on climate and vegetation. This requires very different camouflage pattern to achieve good protection. To find the best performing pattern for given environments we have in earlier evaluations mainly applied observer trials as evaluation method. In these camouflage evaluation test human observers were asked to search for targets (in natural settings) presented on a high resolution PC screen, and the corresponding detection times were recorded. Another possibility is to base the evaluation on simulations. CAMAELEON is a licensed tool that ranks camouflaged targets by their similarity with local backgrounds. The similarity is estimated through the parameters local contrast, orientation of structures in the pattern and spatial frequency, by mimicking the response and signal processing in the visual cortex of the human eye. Simulations have a number of advantages over observer trials, for example, that they are more flexible, cheaper, and faster. Applying these two methods to the same images of camouflaged targets we found that CAMAELEON simulation results didn't match observer trial results for targets with disruptive patterns. This finding now calls for follow up studies in order to learn more about the advantages and pitfalls of CAMAELEON. During recent observer trials we studied new camouflage patterns and the effect of additional equipment, such as combat vests. In this paper we will present the results from a study comparing evaluation results of human based observer trials and CAMAELEON.

  11. Rate determination from vector observations

    NASA Technical Reports Server (NTRS)

    Weiss, Jerold L.

    1993-01-01

    Vector observations are a common class of attitude data provided by a wide variety of attitude sensors. Attitude determination from vector observations is a well-understood process and numerous algorithms such as the TRIAD algorithm exist. These algorithms require measurement of the line of site (LOS) vector to reference objects and knowledge of the LOS directions in some predetermined reference frame. Once attitude is determined, it is a simple matter to synthesize vehicle rate using some form of lead-lag filter, and then, use it for vehicle stabilization. Many situations arise, however, in which rate knowledge is required but knowledge of the nominal LOS directions are not available. This paper presents two methods for determining spacecraft angular rates from vector observations without a priori knowledge of the vector directions. The first approach uses an extended Kalman filter with a spacecraft dynamic model and a kinematic model representing the motion of the observed LOS vectors. The second approach uses a 'differential' TRIAD algorithm to compute the incremental direction cosine matrix, from which vehicle rate is then derived.

  12. Investigating circular patterns in linear polarization observations of Venus

    NASA Astrophysics Data System (ADS)

    Mahapatra, Gourav; Stam, Daphne; Rossi, Loic; Rodenhuis, Michiel; Snik, Frans

    2017-04-01

    ESA's Venus Express mission has revealed our neighbouring planet to be a highly dynamic world, with ever-changing cloud properties and structures, wind speeds that increase in time, and variable concentrations of atmospheric trace gases such as SO2. The SPICAV-IR instrument on Venus Express has provided us with close-up linear polarization data of sunlight reflected by Venus's clouds and hazes, that allows a characterisation of their composition and particle sizes. Here, we analyse linear polarization data of the planet at a distance, obtained with the Extreme Polarimeter (ExPo) on the William Herschel Telescope on La Palma. These spatially resolved, high-accuracy polarization observations of Venus show faint circular patterns centered on the sub-solar point that are absent in the flux observations. So far, careful analyses have ruled out instrumental effects which leaves us to wonder about atmospheric properties as the cause of the circular patterns. Using numerical simulations of the flux and polarization of sunlight that is reflected by Venus, we have investigated the relation between the observed patterns and several atmospheric properties, such as variations in particle sizes, composition, density and altitude. We discuss the plausibility of the possible causes in the view of the current knowledge of the composition and dynamical processes in Venus's atmosphere.

  13. Digital holographic tomography method for 3D observation of domain patterns in ferroelectric single crystals

    NASA Astrophysics Data System (ADS)

    Mokrý, Pavel; Psota, Pavel; Steiger, Kateřina; Václavík, Jan; Vápenka, David; Doleček, Roman; Vojtíšek, Petr; Sládek, Juraj; Lédl, Vít.

    2016-11-01

    We report on the development and implementation of the digital holographic tomography for the three-dimensio- nal (3D) observations of the domain patterns in the ferroelectric single crystals. Ferroelectric materials represent a group of materials, whose macroscopic dielectric, electromechanical, and elastic properties are greatly in uenced by the presence of domain patterns. Understanding the role of domain patterns on the aforementioned properties require the experimental techniques, which allow the precise 3D measurements of the spatial distribution of ferroelectric domains in the single crystal. Unfortunately, such techniques are rather limited at this time. The most frequently used piezoelectric atomic force microscopy allows 2D observations on the ferroelectric sample surface. Optical methods based on the birefringence measurements provide parameters of the domain patterns averaged over the sample volume. In this paper, we analyze the possibility that the spatial distribution of the ferroelectric domains can be obtained by means of the measurement of the wavefront deformation of the transmitted optical wave. We demonstrate that the spatial distribution of the ferroelectric domains can be determined by means of the measurement of the spatial distribution of the refractive index. Finally, it is demonstrated that the measurements of wavefront deformations generated in ferroelectric polydomain systems with small variations of the refractive index provide data, which can be further processed by means of the conventional tomographic methods.

  14. Epidemiology of moderate-to-severe injury patterns observed in rollover crashes.

    PubMed

    McMurry, Timothy L; Bose, Dipan; Ridella, Stephen A; Eigen, Ana M; Crandall, Jeff R; Kerrigan, Jason R

    2016-05-01

    Previous epidemiological studies have highlighted the high risk of injury to the head, thorax, and cervical spine in rollover crashes. However, such results provide limited information on whole-body injury distribution and multiple region injury patterns necessary for the improvement and prioritization of rollover-focused injury countermeasures. Sampled cases representing approximately 133,000 U.S. adult occupants involved in rollover crashes (between 1995 and 2013) sustaining moderate-to-severe injuries were selected from the National Automotive Sampling System Crashworthiness Data System database. A retrospective cohort study, based on a survey of population-based data, was used to identify relevant whole body injury patterns. Among belted occupants injured in rollover crashes, 79.2% sustained injuries to only one body region. The three most frequently injured (AIS2+) body regions were head (42.1%), upper extremity (28.0%), and thorax (27.1%). The most frequent multi-region injury pattern involved the head and upper extremity, but this pattern only accounted for 2.3% of all of occupants with moderate or worse injuries. The results indicated that for rollover-dominated crashes, the frequently observed injury patterns involved isolated body regions. In contrast, multi-region injury patterns are more frequently observed in rollovers with significant planar impacts. Identification of region-specific injury patterns in pure rollover crashes is essential for clarifying injury mitigation targets and developing whole-body injury metrics specifically applicable to rollovers. Copyright © 2016 Elsevier Ltd. All rights reserved.

  15. Dermoscopic patterns of Melanoma Metastases: inter-observer consistency and accuracy for metastases recognition

    PubMed Central

    Costa, J.; Ortiz-Ibañez, K.; Salerni, G.; Borges, V.; Carrera, C.; Puig, S.; Malvehy, J.

    2013-01-01

    Background Cutaneous metastases of malignant melanoma (CMMM) can be confused with other skin lesions. Dermoscopy could be helpful in the differential diagnosis. Objective To describe distinctive dermoscopic patterns that are reproducible and accurate in the identification of CMMM Methods A retrospective study of 146 dermoscopic images of CMMM from 42 patients attending a Melanoma Unit between 2002 and 2009 was performed. Firstly, two investigators established six dermoscopic patterns for CMMM. The correlation of 73 dermoscopic images with their distinctive patterns was assessed by four independent dermatologists to evaluate the reproducibility in the identification of the patterns. Finally, 163 dermoscopic images, including CMMM and non-metastatic lesions, were evaluated by the same four dermatologists to calculate the accuracy of the patterns in the recognition of CMMM. Results Five CMMM dermoscopic patterns had a good inter-observer agreement (blue nevus-like, nevus-like, angioma like, vascular and unspecific). When CMMM were classified according to these patterns, correlation between the investigators and the four dermatologists ranged from κ = 0.56 to 0.7. 71 CMMM, 16 angiomas, 22 blue nevus, 15 malignant melanoma, 11 seborrheic keratosis, 15 melanocytic nevus with globular pattern and 13 pink lesions with vascular pattern were evaluated according to the previously described CMMM dermoscopy patterns, showing an overall sensitivity of 68% (between 54.9–76%) and a specificity of 81% (between 68.6–93.5) for the diagnosis of CMMM. Conclusion Five dermoscopic patterns of CMMM with good inter-observer agreement obtained a high sensitivity and specificity in the diagnosis of metastasis, the accuracy varying according to the experience of the observer. PMID:23495915

  16. Using forbidden ordinal patterns to detect determinism in irregularly sampled time series.

    PubMed

    Kulp, C W; Chobot, J M; Niskala, B J; Needhammer, C J

    2016-02-01

    It is known that when symbolizing a time series into ordinal patterns using the Bandt-Pompe (BP) methodology, there will be ordinal patterns called forbidden patterns that do not occur in a deterministic series. The existence of forbidden patterns can be used to identify deterministic dynamics. In this paper, the ability to use forbidden patterns to detect determinism in irregularly sampled time series is tested on data generated from a continuous model system. The study is done in three parts. First, the effects of sampling time on the number of forbidden patterns are studied on regularly sampled time series. The next two parts focus on two types of irregular-sampling, missing data and timing jitter. It is shown that forbidden patterns can be used to detect determinism in irregularly sampled time series for low degrees of sampling irregularity (as defined in the paper). In addition, comments are made about the appropriateness of using the BP methodology to symbolize irregularly sampled time series.

  17. Feature in Antenna Pattern for Pointing and Orientation Determination

    NASA Technical Reports Server (NTRS)

    Rochblatt, David (Inventor)

    2016-01-01

    Systems and methods for antenna pointing are disclosed. A transmit antenna system having an adjustable boresight transmits a signal exhibiting a far-field pattern including a feature (e.g. a V-Notch) in a polarization of the signal disposed at a fixed position off a beam peak of the far-field pattern of the signal. A receive antenna system scans across the far-field pattern of the signal in the polarization to locate the feature and determine a pointing error of the adjustable boresight therefrom. The system may be applied to a cross-polarization of the signal where a co-polarization of the signal is simultaneously used for telecommunication.

  18. Gravity observation data analysis 1988 -1998 - 2011 to determine gravity changes of Merapi volcano

    NASA Astrophysics Data System (ADS)

    Indriana, R. D.; Kirbani, S. B.; Setiawan, A.; Sunantyo, T. A.

    2018-03-01

    The big eruption of Merapi Volcano in 2010 resulted in a Merapi-type eruption being a phreatic type that is thought to be the result of subsurface changes. The study of gravitational gravity change in observational data of gravity observation in 1988, 1998, 2011 was conducted to determine the sub-surface changes of Merapi pre and post-eruption of 2010. The research data consisted of primary and secondary gravity data provided by Geophysics Laboratory Department of Physics Gadjah Mada University in Yogyakarta consisted of g observation data in 1988, 1998, 2011 and Data Digital Elevation Model (DEM). The result of this study is the relative terrestrial g_observation of 1998-1988 around the peak of Merapi is - 85 s.d. 70 mgal, in the northwest and north of the peak is -15 s.d. - 55 mgal, east and west worth 5 s.d. 15 mgal and south of peak anomaly change is -5 s.d. 0 mgal. The relative gestation of the relative terrestrial observations of 2011 on relative terrestrial g_observation in 1998 showed changes in patterns around the peak of Merapi. The value of terrestrial observation g relative changes 2011-1998. The relative value of terrestrial g_observation change is -85 s.d. 70 mgal, northwest -5 s.d. - 20 mgal, east and west peaks 0 s.d. 10 mgal, in the southern peak of Merapi there is an anomaly value change -5 s.d. -50 mgal. The pattern of contour change has been compatible with the Merapi eruption mass distribution map 1911 s.d. 2006 and DEM changes.

  19. Direct observation of resonance scattering patterns in single silicon nanoparticles

    NASA Astrophysics Data System (ADS)

    Valuckas, Vytautas; Paniagua-Domínguez, Ramón; Fu, Yuan Hsing; Luk'yanchuk, Boris; Kuznetsov, Arseniy I.

    2017-02-01

    We present the first direct observation of the scattering patterns of electric and magnetic dipole resonances excited in a single silicon nanosphere. Almost perfectly spherical silicon nanoparticles were fabricated and deposited on a 30 nm-thick silicon nitride membrane in an attempt to minimize particle—substrate interaction. Measurements were carried out at visible wavelengths by means of the Fourier microscopy in a dark-field illumination setup. The obtained back-focal plane images clearly reveal the characteristic scattering patterns associated with each resonance and are found to be in a good agreement with the simulated results.

  20. Ex vivo determination of chewing patterns using FBG and artificial neural networks

    NASA Astrophysics Data System (ADS)

    Karam, L. Z.; Pegorini, V.; Pitta, C. S. R.; Assmann, T. S.; Cardoso, R.; Kalinowski, H. J.; Silva, J. C. C.

    2014-05-01

    This paper reports the experimental procedures performed in a bovine head for the determination of chewing patterns during the mastication process. Mandible movements during the chewing have been simulated either by using two plasticine materials with different textures or without material. Fibre Bragg grating sensors were fixed in the jaw to monitor the biomechanical forces involved in the chewing process. The acquired signals from the sensors fed the input of an artificial neural network aiming at the classification of the measured chewing patterns for each material used in the experiment. The results obtained from the simulation of the chewing process presented different patterns for the different textures of plasticine, resulting on the determination of three chewing patterns with a classification error of 5%.

  1. Interactions between traditional regional determinants and socio-economic status on dietary patterns in a sample of French men.

    PubMed

    Perrin, Anne-Elisabeth; Dallongeville, Jean; Ducimetière, Pierre; Ruidavets, Jean-Bernard; Schlienger, Jean-Louis; Arveiler, Dominique; Simon, Chantal

    2005-01-01

    The aim of the present study was to assess the respective contributions of regional and socio-economic factors to dietary pattern. We used the data from the final MONICA (MONItoring of trends and determinants in Cardiovascular disease) population survey conducted in the three French centres in 1995-7 among a representative sample of 976 men aged 45-64 years. Dietary intake was assessed using a 3-d record method. Dietary patterns were identified by a factor analysis, based on fifteen food items. An analysis of variance was then used to study their relationship with regional and socio-economic determinants. Two major dietary patterns were identified: a 'Western diet', characterized by high intakes of sugar and sweets, grains, butter, added fats, eggs, potatoes and cheese; a 'prudent diet', mainly distinguished by high intakes of fruit, vegetables, olive oil and fish and low intakes of alcohol, high-fat meat and potatoes. Strong associations were mostly observed with the 'prudent diet' pattern, with a significant relationship with region, educational and income-tax levels, leisure-time physical activity and smoking status. There was also a statistically significant interaction between region and educational level (P=0.05), and between region and income-tax level (P=0.03), indicating that the influence of socio-economic factors is different among regions. In conclusion, these results indicate large regional and socio-economic differences in the dietary patterns of this French male population. When considering the 'prudent diet' pattern, they also suggest that traditional regional influences may now be overcome by socio-economic determinants.

  2. A system for simulating aerial or orbital TV observations of geographic patterns

    NASA Technical Reports Server (NTRS)

    Latham, J. P.

    1972-01-01

    A system which simulates observation of the earth surface by aerial or orbiting television devices has been developed. By projecting color slides of photographs taken by aircraft and orbiting sensors upon a rear screen system, and altering scale of projected image, screen position, or TV camera position, it is possible to simulate alternatives of altitude, or optical systems. By altering scan line patterns in COHU 3200 series camera from 525 to 945 scan lines, it is possible to study implications of scan line resolution upon the detection and analysis of geographic patterns observed by orbiting TV systems.

  3. Determination of circulation and turbidity patterns in Kerr Lake from LANDSAT MSS imagery. [Kerr Lake, Virginia, North Carolina

    NASA Technical Reports Server (NTRS)

    Lecroy, S. R. (Principal Investigator)

    1981-01-01

    The LANDSAT imagery was historically analyzed to determine the circulation and turbidity patterns of Kerr Lake, located on the Virginia-North Carolina border. By examining the seasonal and regional turbidity and circulation patterns, a record of sediment transport and possible disposition can be obtained. Sketches were generated, displaying different intensities of brightness observed in bands 5 and 7 of LANDSAT's multispectral scanner data. Differences in and between bands 5 and 7 indicate variances in the levels of surface sediment concentrations. High sediment loads are revealed when distinct patterns appear in the band 7 imagery. The upwelled signal is exponential in nature and saturates in band 5 at low wavelengths for large concentrations of suspended solids.

  4. Determination of Fracture Patterns in Glass and Glassy Polymers.

    PubMed

    Baca, Allison C; Thornton, John I; Tulleners, Frederic A

    2016-01-01

    The study of fractures of glass, glassy-type materials, and plastic has long been of interest to the forensic community. The focus of this interest has been the use of glass and polymer fractures to associate items of evidence under the assumption that each fracture is different. Generally, it is well-accepted that deviations exist; however, the emphasis has been on classifying and predicting fracture rather than determining that each fracture is different. This study documented the controlled fracture patterns of 60 glass panes, 60 glass bottles, and 60 plastic tail light lens covers using both dynamic impact and static pressure methods under closely controlled conditions. Each pattern was intercompared, and based on the limited specimens tested in this study, the results illustrate that the fracture patterns are different. Further repetitive studies, under controlled conditions, will be needed to provide more statistical significance to the theory that each fracture forms a nonreproducible fracture pattern. © 2015 American Academy of Forensic Sciences.

  5. Advances in the use of observed spatial patterns of catchment hydrological response

    NASA Astrophysics Data System (ADS)

    Grayson, Rodger B.; Blöschl, Günter; Western, Andrew W.; McMahon, Thomas A.

    Over the past two decades there have been repeated calls for the collection of new data for use in developing hydrological science. The last few years have begun to bear fruit from the seeds sown by these calls, through increases in the availability and utility of remote sensing data, as well as the execution of campaigns in research catchments aimed at providing new data for advancing hydrological understanding and predictive capability. In this paper we discuss some philosophical considerations related to model complexity, data availability and predictive performance, highlighting the potential of observed patterns in moving the science and practice of catchment hydrology forward. We then review advances that have arisen from recent work on spatial patterns, including in the characterisation of spatial structure and heterogeneity, and the use of patterns for developing, calibrating and testing distributed hydrological models. We illustrate progress via examples using observed patterns of snow cover, runoff occurrence and soil moisture. Methods for the comparison of patterns are presented, illustrating how they can be used to assess hydrologically important characteristics of model performance. These methods include point-to-point comparisons, spatial relationships between errors and landscape parameters, transects, and optimal local alignment. It is argued that the progress made to date augers well for future developments, but there is scope for improvements in several areas. These include better quantitative methods for pattern comparisons, better use of pattern information in data assimilation and modelling, and a call for improved archiving of data from field studies to assist in comparative studies for generalising results and developing fundamental understanding.

  6. Behavioral and brain pattern differences between acting and observing in an auditory task

    PubMed Central

    Karanasiou, Irene S; Papageorgiou, Charalabos; Tsianaka, Eleni I; Matsopoulos, George K; Ventouras, Errikos M; Uzunoglu, Nikolaos K

    2009-01-01

    Background Recent research has shown that errors seem to influence the patterns of brain activity. Additionally current notions support the idea that similar brain mechanisms are activated during acting and observing. The aim of the present study was to examine the patterns of brain activity of actors and observers elicited upon receiving feedback information of the actor's response. Methods The task used in the present research was an auditory identification task that included both acting and observing settings, ensuring concurrent ERP measurements of both participants. The performance of the participants was investigated in conditions of varying complexity. ERP data were analyzed with regards to the conditions of acting and observing in conjunction to correct and erroneous responses. Results The obtained results showed that the complexity induced by cue dissimilarity between trials was a demodulating factor leading to poorer performance. The electrophysiological results suggest that feedback information results in different intensities of the ERP patterns of observers and actors depending on whether the actor had made an error or not. The LORETA source localization method yielded significantly larger electrical activity in the supplementary motor area (Brodmann area 6), the posterior cingulate gyrus (Brodmann area 31/23) and the parietal lobe (Precuneus/Brodmann area 7/5). Conclusion These findings suggest that feedback information has a different effect on the intensities of the ERP patterns of actors and observers depending on whether the actor committed an error. Certain neural systems, including medial frontal area, posterior cingulate gyrus and precuneus may mediate these modulating effects. Further research is needed to elucidate in more detail the neuroanatomical and neuropsychological substrates of these systems. PMID:19154586

  7. Coupled topographic and vegetation patterns in coastal dunes: Remote sensing observations and ecomorphodynamic implications

    NASA Astrophysics Data System (ADS)

    Yousefi Lalimi, F.; Silvestri, S.; Moore, L. J.; Marani, M.

    2017-01-01

    Vegetation plays a key role in stabilizing coastal dunes and barrier islands by mediating sand transport, deposition, and erosion. Dune topography, in turn, affects vegetation growth, by determining local environmental conditions. However, our understanding of vegetation and dune topography as coupled and spatially extensive dynamical systems is limited. Here we develop and use remote sensing analyses to quantitatively characterize coastal dune ecotopographic patterns by simultaneously identifying the spatial distribution of topographic elevation and vegetation biomass. Lidar-derived leaf area index and hyperspectral-derived normalized difference vegetation index patterns yield vegetation distributions at the whole-system scale which are in agreement with each other and with field observations. Lidar-derived concurrent quantifications of biomass and topography show that plants more favorably develop on the landward side of the foredune crest and that the foredune crestline marks the position of an ecotone, which is interpreted as the result of a sheltering effect sharply changing local environmental conditions. We conclude that the position of the foredune crestline is a chief ecomorphodynamic feature resulting from the two-way interaction between vegetation and topography.

  8. Bloodstain Pattern Analysis: implementation of a fluid dynamic model for position determination of victims

    PubMed Central

    Laan, Nick; de Bruin, Karla G.; Slenter, Denise; Wilhelm, Julie; Jermy, Mark; Bonn, Daniel

    2015-01-01

    Bloodstain Pattern Analysis is a forensic discipline in which, among others, the position of victims can be determined at crime scenes on which blood has been shed. To determine where the blood source was investigators use a straight-line approximation for the trajectory, ignoring effects of gravity and drag and thus overestimating the height of the source. We determined how accurately the location of the origin can be estimated when including gravity and drag into the trajectory reconstruction. We created eight bloodstain patterns at one meter distance from the wall. The origin’s location was determined for each pattern with: the straight-line approximation, our method including gravity, and our method including both gravity and drag. The latter two methods require the volume and impact velocity of each bloodstain, which we are able to determine with a 3D scanner and advanced fluid dynamics, respectively. We conclude that by including gravity and drag in the trajectory calculation, the origin’s location can be determined roughly four times more accurately than with the straight-line approximation. Our study enables investigators to determine if the victim was sitting or standing, or it might be possible to connect wounds on the body to specific patterns, which is important for crime scene reconstruction. PMID:26099070

  9. Bloodstain Pattern Analysis: implementation of a fluid dynamic model for position determination of victims.

    PubMed

    Laan, Nick; de Bruin, Karla G; Slenter, Denise; Wilhelm, Julie; Jermy, Mark; Bonn, Daniel

    2015-06-22

    Bloodstain Pattern Analysis is a forensic discipline in which, among others, the position of victims can be determined at crime scenes on which blood has been shed. To determine where the blood source was investigators use a straight-line approximation for the trajectory, ignoring effects of gravity and drag and thus overestimating the height of the source. We determined how accurately the location of the origin can be estimated when including gravity and drag into the trajectory reconstruction. We created eight bloodstain patterns at one meter distance from the wall. The origin's location was determined for each pattern with: the straight-line approximation, our method including gravity, and our method including both gravity and drag. The latter two methods require the volume and impact velocity of each bloodstain, which we are able to determine with a 3D scanner and advanced fluid dynamics, respectively. We conclude that by including gravity and drag in the trajectory calculation, the origin's location can be determined roughly four times more accurately than with the straight-line approximation. Our study enables investigators to determine if the victim was sitting or standing, or it might be possible to connect wounds on the body to specific patterns, which is important for crime scene reconstruction.

  10. Bloodstain Pattern Analysis: implementation of a fluid dynamic model for position determination of victims

    NASA Astrophysics Data System (ADS)

    Laan, Nick; de Bruin, Karla G.; Slenter, Denise; Wilhelm, Julie; Jermy, Mark; Bonn, Daniel

    2015-06-01

    Bloodstain Pattern Analysis is a forensic discipline in which, among others, the position of victims can be determined at crime scenes on which blood has been shed. To determine where the blood source was investigators use a straight-line approximation for the trajectory, ignoring effects of gravity and drag and thus overestimating the height of the source. We determined how accurately the location of the origin can be estimated when including gravity and drag into the trajectory reconstruction. We created eight bloodstain patterns at one meter distance from the wall. The origin’s location was determined for each pattern with: the straight-line approximation, our method including gravity, and our method including both gravity and drag. The latter two methods require the volume and impact velocity of each bloodstain, which we are able to determine with a 3D scanner and advanced fluid dynamics, respectively. We conclude that by including gravity and drag in the trajectory calculation, the origin’s location can be determined roughly four times more accurately than with the straight-line approximation. Our study enables investigators to determine if the victim was sitting or standing, or it might be possible to connect wounds on the body to specific patterns, which is important for crime scene reconstruction.

  11. Calibration of a distributed hydrologic model using observed spatial patterns from MODIS data

    NASA Astrophysics Data System (ADS)

    Demirel, Mehmet C.; González, Gorka M.; Mai, Juliane; Stisen, Simon

    2016-04-01

    Distributed hydrologic models are typically calibrated against streamflow observations at the outlet of the basin. Along with these observations from gauging stations, satellite based estimates offer independent evaluation data such as remotely sensed actual evapotranspiration (aET) and land surface temperature. The primary objective of the study is to compare model calibrations against traditional downstream discharge measurements with calibrations against simulated spatial patterns and combinations of both types of observations. While the discharge based model calibration typically improves the temporal dynamics of the model, it seems to give rise to minimum improvement of the simulated spatial patterns. In contrast, objective functions specifically targeting the spatial pattern performance could potentially increase the spatial model performance. However, most modeling studies, including the model formulations and parameterization, are not designed to actually change the simulated spatial pattern during calibration. This study investigates the potential benefits of incorporating spatial patterns from MODIS data to calibrate the mesoscale hydrologic model (mHM). This model is selected as it allows for a change in the spatial distribution of key soil parameters through the optimization of pedo-transfer function parameters and includes options for using fully distributed daily Leaf Area Index (LAI) values directly as input. In addition the simulated aET can be estimated at a spatial resolution suitable for comparison to the spatial patterns observed with MODIS data. To increase our control on spatial calibration we introduced three additional parameters to the model. These new parameters are part of an empirical equation to the calculate crop coefficient (Kc) from daily LAI maps and used to update potential evapotranspiration (PET) as model inputs. This is done instead of correcting/updating PET with just a uniform (or aspect driven) factor used in the mHM model

  12. Geometric and material determinants of patterning efficiency by dielectrophoresis.

    PubMed

    Albrecht, Dirk R; Sah, Robert L; Bhatia, Sangeeta N

    2004-10-01

    Dielectrophoretic (DEP) forces have been used extensively to manipulate, separate, and localize biological cells and bioparticles via high-gradient electric fields. However, minimization of DEP exposure time is desirable, because of possible untoward effects on cell behavior. Toward this goal, this article investigates the geometric and material determinants of particle patterning kinetics and efficiency. In particular, the time required to achieve a steady-state pattern is theoretically modeled and experimentally validated for a planar, interdigitated bar electrode array energized in a standing-wave configuration. This measure of patterning efficiency is calculated from an improved Fourier series solution of DEP force, in which realistic boundary conditions and a finite chamber height are imposed to reflect typical microfluidic applications. The chamber height, electrode spacing, and fluid viscosity and conductivity are parameters that profoundly affect patterning efficiency, and optimization can reduce electric field exposure by orders of magnitude. Modeling strategies are generalizable to arbitrary electrode design as well as to conditions where DEP force may not act alone to cause particle motion. This improved understanding of DEP patterning kinetics provides a framework for new advances in the development of DEP-based biological devices and assays with minimal perturbation of cell behavior. Copyright 2004 Biophysical Society

  13. Geometric and Material Determinants of Patterning Efficiency by Dielectrophoresis

    PubMed Central

    Albrecht, Dirk R.; Sah, Robert L.; Bhatia, Sangeeta N.

    2004-01-01

    Dielectrophoretic (DEP) forces have been used extensively to manipulate, separate, and localize biological cells and bioparticles via high-gradient electric fields. However, minimization of DEP exposure time is desirable, because of possible untoward effects on cell behavior. Toward this goal, this article investigates the geometric and material determinants of particle patterning kinetics and efficiency. In particular, the time required to achieve a steady-state pattern is theoretically modeled and experimentally validated for a planar, interdigitated bar electrode array energized in a standing-wave configuration. This measure of patterning efficiency is calculated from an improved Fourier series solution of DEP force, in which realistic boundary conditions and a finite chamber height are imposed to reflect typical microfluidic applications. The chamber height, electrode spacing, and fluid viscosity and conductivity are parameters that profoundly affect patterning efficiency, and optimization can reduce electric field exposure by orders of magnitude. Modeling strategies are generalizable to arbitrary electrode design as well as to conditions where DEP force may not act alone to cause particle motion. This improved understanding of DEP patterning kinetics provides a framework for new advances in the development of DEP-based biological devices and assays with minimal perturbation of cell behavior. PMID:15454417

  14. Regulatory Divergence between Parental Alleles Determines Gene Expression Patterns in Hybrids

    PubMed Central

    Combes, Marie-Christine; Hueber, Yann; Dereeper, Alexis; Rialle, Stéphanie; Herrera, Juan-Carlos; Lashermes, Philippe

    2015-01-01

    Both hybridization and allopolyploidization generate novel phenotypes by conciliating divergent genomes and regulatory networks in the same cellular context. To understand the rewiring of gene expression in hybrids, the total expression of 21,025 genes and the allele-specific expression of over 11,000 genes were quantified in interspecific hybrids and their parental species, Coffea canephora and Coffea eugenioides using RNA-seq technology. Between parental species, cis- and trans-regulatory divergences affected around 32% and 35% of analyzed genes, respectively, with nearly 17% of them showing both. The relative importance of trans-regulatory divergences between both species could be related to their low genetic divergence and perennial habit. In hybrids, among divergently expressed genes between parental species and hybrids, 77% was expressed like one parent (expression level dominance), including 65% like C. eugenioides. Gene expression was shown to result from the expression of both alleles affected by intertwined parental trans-regulatory factors. A strong impact of C. eugenioides trans-regulatory factors on the upregulation of C. canephora alleles was revealed. The gene expression patterns appeared determined by complex combinations of cis- and trans-regulatory divergences. In particular, the observed biased expression level dominance seemed to be derived from the asymmetric effects of trans-regulatory parental factors on regulation of alleles. More generally, this study illustrates the effects of divergent trans-regulatory parental factors on the gene expression pattern in hybrids. The characteristics of the transcriptional response to hybridization appear to be determined by the compatibility of gene regulatory networks and therefore depend on genetic divergences between the parental species and their evolutionary history. PMID:25819221

  15. North American vegetation patterns observed with the NOAA-7 advanced very high resolution radiometer. [North America

    NASA Technical Reports Server (NTRS)

    Goward, S. N.; Tucker, C. J.; Dye, D. G.

    1985-01-01

    Spectral vegetation index measurements derived from remotely sensed observations show great promise as a means to improve knowledge of land vegetation patterns. The daily, global observations acquired by the advanced very high resolution radiometer, a sensor on the current series of U.S. National Oceanic and Atmospheric Administration meteorological satellites, may be particularly well suited for global studies of vegetation. Preliminary results from analysis of North American observations, extending from April to November 1982, show that the vegetation index patterns observed correspond to the known seasonality of North American natural and cultivated vegetation. Integration of the observations over the growing season produced measurements that are related to net primary productivity patterns of the major North American natural vegetation formations. Regions of intense cultivation were observed as anomalous areas in the integrated growing season measurements. Significant information on seasonality, annual extent and interannual variability of vegetation photosynthetic activity at continental and global scales can be derived from these satellite observations.

  16. Infant feeding patterns in families with a diabetes history - observations from The Environmental Determinants of Diabetes in the Young (TEDDY) birth cohort study.

    PubMed

    Hummel, Sandra; Vehik, Kendra; Uusitalo, Ulla; McLeod, Wendy; Aronsson, Carin Andrén; Frank, Nicole; Gesualdo, Patricia; Yang, Jimin; Norris, Jill M; Virtanen, Suvi M

    2014-12-01

    To assess the association between diabetes family history and infant feeding patterns. Data on breast-feeding duration and age at first introduction of cow's milk and gluten-containing cereals were collected in 3-month intervals during the first 24 months of life. Data from the multicentre TEDDY (The Environmental Determinants of Diabetes in the Young) study, including centres in the USA, Sweden, Finland and Germany. A total of 7026 children, including children with a mother with type 1 diabetes (T1D; n 292), gestational diabetes mellitus (GDM; n 404) or without diabetes but with a father and/or sibling with T1D (n 464) and children without diabetes family history (n 5866). While exclusive breast-feeding ended earlier and cow's milk was introduced earlier in offspring of mothers with T1D and GDM, offspring of non-diabetic mothers but a father and/or sibling with T1D were exclusively breast-fed longer and introduced to cow's milk later compared with infants without diabetes family history. The association between maternal diabetes and shorter exclusive breast-feeding duration was attenuated after adjusting for clinical variables (delivery mode, gestational age, Apgar score and birth weight). Country-specific analyses revealed differences in these associations, with Sweden showing the strongest and Finland showing no association between maternal diabetes and breast-feeding duration. Family history of diabetes is associated with infant feeding patterns; however, the associations clearly differ by country, indicating that cultural differences are important determinants of infant feeding behaviour. These findings need to be considered when developing strategies to improve feeding patterns in infants with a diabetes family history.

  17. Determinants of dietary patterns and diet quality during pregnancy: a systematic review with narrative synthesis.

    PubMed

    Doyle, Ina-Merle; Borrmann, Brigitte; Grosser, Angelique; Razum, Oliver; Spallek, Jacob

    2017-04-01

    To identify determinants of diet in pregnancy, by detecting factors in our multiple-determinants life course framework that are associated with dietary patterns, quality or guideline adherence. A systematic review of observational studies, published in English or German, was conducted. Sociodemographic, lifestyle, environmental and pregnancy-related determinants were considered. Four electronic databases were searched in January 2015 and updated in April 2016 and a total of 4368 articles identified. Risk of bias was assessed using adapted Newcastle-Ottawa Scales. High- and upper-middle-income countries. Pregnant or postpartum women reporting their dietary intake during pregnancy. Seventeen publications of twelve studies were included and compared narratively due to heterogeneity. Diet in pregnancy was patterned along a social gradient and aligned with other health behaviours before and during pregnancy. Few studies investigated the influence of the social and built environment and their findings were inconsistent. Except for parity, pregnancy determinants were rarely assessed even though pregnancy is a physiologically and psychologically unique period. Various less well-researched factors such as the role of ethnicity, pregnancy intendedness, pregnancy ailments and macro-level environment were identified that need to be studied in more detail. The framework was supported by the literature identified, but more research of sound methodology is needed in order to conclusively disentangle the interplay of the different determinants. Practitioners should be aware that pregnant women who are young, have a low education or do not follow general health advice appear to be at higher risk of inadequate dietary intake.

  18. Do Patterns of Bacterial Diversity along Salinity Gradients Differ from Those Observed for Macroorganisms?

    PubMed Central

    Zhang, Yong; Shen, Ji; van der Gast, Christopher; Hahn, Martin W.; Wu, Qinglong

    2011-01-01

    It is widely accepted that biodiversity is lower in more extreme environments. In this study, we sought to determine whether this trend, well documented for macroorganisms, also holds at the microbial level for bacteria. We used denaturing gradient gel electrophoresis (DGGE) with phylum-specific primers to quantify the taxon richness (i.e., the DGGE band numbers) of the bacterioplankton communities of 32 pristine Tibetan lakes that represent a broad salinity range (freshwater to hypersaline). For the lakes investigated, salinity was found to be the environmental variable with the strongest influence on the bacterial community composition. We found that the bacterial taxon richness in freshwater habitats increased with increasing salinity up to a value of 1‰. In saline systems (systems with >1‰ salinity), the expected decrease of taxon richness along a gradient of further increasing salinity was not observed. These patterns were consistently observed for two sets of samples taken in two different years. A comparison of 16S rRNA gene clone libraries revealed that the bacterial community of the lake with the highest salinity was characterized by a higher recent accelerated diversification than the community of a freshwater lake, whereas the phylogenetic diversity in the hypersaline lake was lower than that in the freshwater lake. These results suggest that different evolutionary forces may act on bacterial populations in freshwater and hypersaline lakes on the Tibetan Plateau, potentially resulting in different community structures and diversity patterns. PMID:22125616

  19. Observational evidence of European summer weather patterns predictable from spring

    NASA Astrophysics Data System (ADS)

    Ossó, Albert; Sutton, Rowan; Shaffrey, Len; Dong, Buwen

    2018-01-01

    Forecasts of summer weather patterns months in advance would be of great value for a wide range of applications. However, seasonal dynamical model forecasts for European summers have very little skill, particularly for rainfall. It has not been clear whether this low skill reflects inherent unpredictability of summer weather or, alternatively, is a consequence of weaknesses in current forecast systems. Here we analyze atmosphere and ocean observations and identify evidence that a specific pattern of summertime atmospheric circulation––the summer East Atlantic (SEA) pattern––is predictable from the previous spring. An index of North Atlantic sea-surface temperatures in March–April can predict the SEA pattern in July–August with a cross-validated correlation skill above 0.6. Our analyses show that the sea-surface temperatures influence atmospheric circulation and the position of the jet stream over the North Atlantic. The SEA pattern has a particularly strong influence on rainfall in the British Isles, which we find can also be predicted months ahead with a significant skill of 0.56. Our results have immediate application to empirical forecasts of summer rainfall for the United Kingdom, Ireland, and northern France and also suggest that current dynamical model forecast systems have large potential for improvement.

  20. Distinct mechanisms determine organ left-right asymmetry patterning in an uncoupled way.

    PubMed

    Huang, Sizhou; Xu, Wenming; Su, Bingyin; Luo, Lingfei

    2014-03-01

    Disruption of Nodal in the lateral plate mesoderm (LPM) usually leads to left-right (LR) patterning defects in multiple organs. However, whether the LR patterning of organs is always regulated in a coupled way has largely not yet been elucidated. In addition, whether other crucial regulators exist in the LPM that coordinate with Nodal in regulating organ LR patterning is also undetermined. In this paper, after briefly summarizing the common process of LR patterning, the most puzzling question regarding the initiation of asymmetry is considered and the divergent mechanisms underlying the uncoupled LR patterning in different organs are discussed. On the basis of cases in which different organ LR patterning is determined in an uncoupled way via an independent mechanism or at a different time, we propose that there are other critical factors in the LPM that coordinate with Nodal to regulate heart LR asymmetry patterning during early LR patterning. © 2014 WILEY Periodicals, Inc.

  1. Regulatory divergence between parental alleles determines gene expression patterns in hybrids.

    PubMed

    Combes, Marie-Christine; Hueber, Yann; Dereeper, Alexis; Rialle, Stéphanie; Herrera, Juan-Carlos; Lashermes, Philippe

    2015-03-29

    Both hybridization and allopolyploidization generate novel phenotypes by conciliating divergent genomes and regulatory networks in the same cellular context. To understand the rewiring of gene expression in hybrids, the total expression of 21,025 genes and the allele-specific expression of over 11,000 genes were quantified in interspecific hybrids and their parental species, Coffea canephora and Coffea eugenioides using RNA-seq technology. Between parental species, cis- and trans-regulatory divergences affected around 32% and 35% of analyzed genes, respectively, with nearly 17% of them showing both. The relative importance of trans-regulatory divergences between both species could be related to their low genetic divergence and perennial habit. In hybrids, among divergently expressed genes between parental species and hybrids, 77% was expressed like one parent (expression level dominance), including 65% like C. eugenioides. Gene expression was shown to result from the expression of both alleles affected by intertwined parental trans-regulatory factors. A strong impact of C. eugenioides trans-regulatory factors on the upregulation of C. canephora alleles was revealed. The gene expression patterns appeared determined by complex combinations of cis- and trans-regulatory divergences. In particular, the observed biased expression level dominance seemed to be derived from the asymmetric effects of trans-regulatory parental factors on regulation of alleles. More generally, this study illustrates the effects of divergent trans-regulatory parental factors on the gene expression pattern in hybrids. The characteristics of the transcriptional response to hybridization appear to be determined by the compatibility of gene regulatory networks and therefore depend on genetic divergences between the parental species and their evolutionary history. © The Author(s) 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

  2. Patterns and determinants of maternity care in Damascus.

    PubMed

    Bashour, H; Abdulsalam, A; Al-Faisal, W; Cheikha, S

    2008-01-01

    This descriptive study was designed to describe the patterns and determinants of maternity care among Syrian women living in Damascus. All 39 birth registers in 2 large provinces were used to recruit 500 mothers of healthy newborns. Mothers were interviewed in their homes using a semistructured questionnaire. Multivariate analysis of the determinants of the frequency of use of antenatal care showed the following variables were significant: urban residence and visit to antenatal care in the 1st trimester. The significant variables for an early visit to antenatal care were the woman's level of education; being pregnant with the 1st baby; and number of visits to antenatal care. Being young (age < 20 years) also correlated with early timing of the 1st antenatal visit.

  3. Global patterns and determinants of forest canopy height.

    PubMed

    Tao, Shengli; Guo, Qinghua; Li, Chao; Wang, Zhiheng; Fang, Jingyun

    2016-12-01

    Forest canopy height is an important indicator of forest biomass, species diversity, and other ecosystem functions; however, the climatic determinants that underlie its global patterns have not been fully explored. Using satellite LiDAR-derived forest canopy heights and field measurements of the world's giant trees, combined with climate indices, we evaluated the global patterns and determinants of forest canopy height. The mean canopy height was highest in tropical regions, but tall forests (>50 m) occur at various latitudes. Water availability, quantified by the difference between annual precipitation and annual potential evapotranspiration (P-PET), was the best predictor of global forest canopy height, which supports the hydraulic limitation hypothesis. However, in striking contrast with previous studies, the canopy height exhibited a hump-shaped curve along a gradient of P-PET: it initially increased, then peaked at approximately 680 mm of P-PET, and finally declined, which suggests that excessive water supply negatively affects the canopy height. This trend held true across continents and forest types, and it was also validated using forest inventory data from China and the United States. Our findings provide new insights into the climatic controls of the world's giant trees and have important implications for forest management and improvement of forest growth models. © 2016 by the Ecological Society of America.

  4. Determining characteristics of artificial near-Earth objects using observability analysis

    NASA Astrophysics Data System (ADS)

    Friedman, Alex M.; Frueh, Carolin

    2018-03-01

    Observability analysis is a method for determining whether a chosen state of a system can be determined from the output or measurements. Knowledge of state information availability resulting from observability analysis leads to improved sensor tasking for observation of orbital debris and better control of active spacecraft. This research performs numerical observability analysis of artificial near-Earth objects. Analysis of linearization methods and state transition matrices is performed to determine the viability of applying linear observability methods to the nonlinear orbit problem. Furthermore, pre-whitening is implemented to reformulate classical observability analysis. In addition, the state in observability analysis is typically composed of position and velocity; however, including object characteristics beyond position and velocity can be crucial for precise orbit propagation. For example, solar radiation pressure has a significant impact on the orbit of high area-to-mass ratio objects in geosynchronous orbit. Therefore, determining the time required for solar radiation pressure parameters to become observable is important for understanding debris objects. In order to compare observability analysis results with and without measurement noise and an extended state, quantitative measures of observability are investigated and implemented.

  5. Automated platform for determination of LEDs spatial radiation pattern

    NASA Astrophysics Data System (ADS)

    Vladescu, Marian; Vuza, Dan Tudor

    2015-02-01

    Nowadays technologies lead to remarkable properties of the light-emitting diodes (LEDs), making them attractive for more and more applications, such as: interior and exterior lighting, outdoor LED panels, traffic signals, automotive (tail and brake lights, backlighting in dashboard and switches), backlighting of display panels, LCD displays, symbols on switches, keyboards, graphic boards and measuring scales. Usually, LEDs are small light sources consisting of a chip placed into a package, which may bring additional optics to this encapsulated ensemble, resulting in a less or more complex spatial distribution of the light intensity, with particular radiation patterns. This paper presents an automated platform designed to allow a quick and accurate determination of the spatial radiation patterns of LEDs encapsulated in various packages. Keywords: LED, luminous

  6. Bursting as a source of non-linear determinism in the firing patterns of nigral dopamine neurons

    PubMed Central

    Jeong, Jaeseung; Shi, Wei-Xing; Hoffman, Ralph; Oh, Jihoon; Gore, John C.; Bunney, Benjamin S.; Peterson, Bradley S.

    2012-01-01

    Nigral dopamine (DA) neurons in vivo exhibit complex firing patterns consisting of tonic single-spikes and phasic bursts that encode information for certain types of reward-related learning and behavior. Non-linear dynamical analysis has previously demonstrated the presence of a non-linear deterministic structure in complex firing patterns of DA neurons, yet the origin of this non-linear determinism remains unknown. In this study, we hypothesized that bursting activity is the primary source of non-linear determinism in the firing patterns of DA neurons. To test this hypothesis, we investigated the dimension complexity of inter-spike interval data recorded in vivo from bursting and non-bursting DA neurons in the chloral hydrate-anesthetized rat substantia nigra. We found that bursting DA neurons exhibited non-linear determinism in their firing patterns, whereas non-bursting DA neurons showed truly stochastic firing patterns. Determinism was also detected in the isolated burst and inter-burst interval data extracted from firing patterns of bursting neurons. Moreover, less bursting DA neurons in halothane-anesthetized rats exhibited higher dimensional spiking dynamics than do more bursting DA neurons in chloral hydrate-anesthetized rats. These results strongly indicate that bursting activity is the main source of low-dimensional, non-linear determinism in the firing patterns of DA neurons. This finding furthermore suggests that bursts are the likely carriers of meaningful information in the firing activities of DA neurons. PMID:22831464

  7. Determination of the Actual Land Use Pattern Using Unmanned Aerial Vehicles and Multispectral Camera

    NASA Astrophysics Data System (ADS)

    Dindaroğlu, T.; Gündoğan, R.; Gülci, S.

    2017-11-01

    The international initiatives developed in the context of combating global warming are based on the monitoring of Land Use, Land Use Changes, and Forests (LULUCEF). Determination of changes in land use patterns is used to determine the effects of greenhouse gas emissions and to reduce adverse effects in subsequent processes. This process, which requires the investigation and control of quite large areas, has undoubtedly increased the importance of technological tools and equipment. The use of carrier platforms and commercially cheaper various sensors have become widespread. In this study, multispectral camera was used to determine the land use pattern with high sensitivity. Unmanned aerial flights were carried out in the research fields of Kahramanmaras Sutcu Imam University campus area. Unmanned aerial vehicle (UAV) (multi-propeller hexacopter) was used as a carrier platform for aerial photographs. Within the scope of this study, multispectral cameras were used to determine the land use pattern with high sensitivity.

  8. Observations of two-phase flow patterns in a horizontal circular channel

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ewing, M.E.; Weinandy, J.J.; Christensen, R.N.

    1999-01-01

    Horizontal two-phase flow patterns were observed in a transparent circular channel (1.90 cm I.D.) using adiabatic mixtures of air and water. Visual identification of the flow regimes was supplemented with photographic data and the results were plotted on the flow regime map which has been proposed by Breber et al. for condensation applications. The results indicate general consistency between the observations and the predictions of the map, and, by providing data for different fluids and conditions from which the map was developed, support its general applicability.

  9. Mapping the changing pattern of local climate as an observed distribution

    NASA Astrophysics Data System (ADS)

    Chapman, Sandra; Stainforth, David; Watkins, Nicholas

    2013-04-01

    It is at local scales that the impacts of climate change will be felt directly and at which adaptation planning decisions must be made. This requires quantifying the geographical patterns in trends at specific quantiles in distributions of variables such as daily temperature or precipitation. Here we focus on these local changes and on the way observational data can be analysed to inform us about the pattern of local climate change. We present a method[1] for analysing local climatic timeseries data to assess which quantiles of the local climatic distribution show the greatest and most robust trends. We demonstrate this approach using E-OBS gridded data[2] timeseries of local daily temperature from specific locations across Europe over the last 60 years. Our method extracts the changing cumulative distribution function over time and uses a simple mathematical deconstruction of how the difference between two observations from two different time periods can be assigned to the combination of natural statistical variability and/or the consequences of secular climate change. This deconstruction facilitates an assessment of the sensitivity of different quantiles of the distributions to changing climate. Geographical location and temperature are treated as independent variables, we thus obtain as outputs the pattern of variation in sensitivity with temperature (or occurrence likelihood), and with geographical location. We find as an output many regionally consistent patterns of response of potential value in adaptation planning. We discuss methods to quantify and map the robustness of these observed sensitivities and their statistical likelihood. This also quantifies the level of detail needed from climate models if they are to be used as tools to assess climate change impact. [1] S C Chapman, D A Stainforth, N W Watkins, 2013, On Estimating Local Long Term Climate Trends, Phil. Trans. R. Soc. A, in press [2] Haylock, M.R., N. Hofstra, A.M.G. Klein Tank, E.J. Klok, P

  10. Note: Experimental observation of nano-channel pattern in light sheet laser interference nanolithography system

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mohan, Kavya; Mondal, Partha Pratim, E-mail: partha@iap.iisc.ernet.in

    We experimentally observed nano-channel-like pattern in a light-sheet based interference nanolithography system. The optical system created nano-channel-like patterned illumination. Coherent counter-propagating light sheets are made to interfere at and near geometrical focus along the propagation z-axis. This results in the formation of nano-channel-like pattern (of size ≈ 300 nm and inter-channel periodicity of ≈337.5 nm) inside the sample due to constructive and destructive interference. In addition, the technique has the ability to generate large area patterning using larger light-sheets. Exciting applications are in the broad field of nanotechnology (nano-electronics and nano-fluidics).

  11. Bursting as a source of non-linear determinism in the firing patterns of nigral dopamine neurons.

    PubMed

    Jeong, Jaeseung; Shi, Wei-Xing; Hoffman, Ralph; Oh, Jihoon; Gore, John C; Bunney, Benjamin S; Peterson, Bradley S

    2012-11-01

    Nigral dopamine (DA) neurons in vivo exhibit complex firing patterns consisting of tonic single-spikes and phasic bursts that encode information for certain types of reward-related learning and behavior. Non-linear dynamical analysis has previously demonstrated the presence of a non-linear deterministic structure in complex firing patterns of DA neurons, yet the origin of this non-linear determinism remains unknown. In this study, we hypothesized that bursting activity is the primary source of non-linear determinism in the firing patterns of DA neurons. To test this hypothesis, we investigated the dimension complexity of inter-spike interval data recorded in vivo from bursting and non-bursting DA neurons in the chloral hydrate-anesthetized rat substantia nigra. We found that bursting DA neurons exhibited non-linear determinism in their firing patterns, whereas non-bursting DA neurons showed truly stochastic firing patterns. Determinism was also detected in the isolated burst and inter-burst interval data extracted from firing patterns of bursting neurons. Moreover, less bursting DA neurons in halothane-anesthetized rats exhibited higher dimensional spiking dynamics than do more bursting DA neurons in chloral hydrate-anesthetized rats. These results strongly indicate that bursting activity is the main source of low-dimensional, non-linear determinism in the firing patterns of DA neurons. This finding furthermore suggests that bursts are the likely carriers of meaningful information in the firing activities of DA neurons. © 2012 The Authors. European Journal of Neuroscience © 2012 Federation of European Neuroscience Societies and Blackwell Publishing Ltd.

  12. Penetration pattern of rhodamine dyes into enamel and dentin: confocal laser microscopy observation.

    PubMed

    Kwon, S R; Wertz, P W; Li, Y; Chan, D C N

    2012-02-01

    Enamel and dentin are susceptible to extrinsic and intrinsic stains. The purposes of this study were to determine the penetration pattern of Rhodamine B and dextran-conjugated Rhodamine B into the enamel and dentin as observed by confocal laser microscopy and to relate it to the penetration pattern of hydrogen peroxide commonly used as an active ingredient in tooth-whitening agents and high-molecular-weight staining molecules. Eighteen recently extracted human maxillary anterior teeth were used. Teeth were cleaned and painted with nail varnish except for the crown area above the cemento-enamel junction (CEJ). The painted teeth were then immersed in Rhodamine B and dextran-conjugated Rhodamine B (70 000 MW) for 4, 7, 10 and 15 days. Teeth were sliced to 3 mm thickness in transverse plane and mounted on a glass slide just prior to observation with confocal laser microscopy. Rhodamine B and dextran-conjugated Rhodamine B readily penetrated into the enamel and dentin when exposed for 4 and 7 days, respectively. Rhodamine B penetrated along the interprismatic spaces of the enamel into the dentin. The penetration was accentuated in sections with existing crack lines in the enamel. Rhodamine B was readily absorbed into the dentinal tubules at the dentino-enamel junction and continued to penetrate through the dentin via the dentinal tubules into the pre-dentin. Within the limitations of this study, it is concluded that Rhodamine B and dextran-conjugated Rhodamine B when applied to the external surface of the tooth readily penetrate into the enamel and dentin via the interprismatic spaces in the enamel and dentinal tubules in the dentin, suggesting that stain molecules and bleaching agents possibly exhibit similar penetration pathways. © 2011 The Authors. ICS © 2011 Society of Cosmetic Scientists and the Société Française de Cosmétologie.

  13. Determination of turbidity patterns in Lake Chicot from LANDSAT MSS imagery

    NASA Technical Reports Server (NTRS)

    Lecroy, S. R. (Principal Investigator)

    1982-01-01

    A historical analysis of all the applicable LANDSAT imagery was conducted on the turbidity patterns of Lake Chicot, located in the southeastern corner of Arkansas. By examining the seasonal and regional turbidity patterns, a record of sediment dynamics and possible disposition can be obtained. Sketches were generated from the suitable imagery, displaying different intensities of brightness observed in bands 5 and 7 of LANDSAT's multispectral scanner data. Differences in and between bands 5 and 7 indicate variances in the levels of surface sediment concentrations. High sediment loads are revealed when distinct patterns appear in the band 7 imagery. Additionally, the upwelled signal is exponential in nature and saturates in band 5 at low wavelengths for large concentrations of suspended solids.

  14. Chaos emerging in soil failure patterns observed during tillage: Normalized deterministic nonlinear prediction (NDNP) and its application.

    PubMed

    Sakai, Kenshi; Upadhyaya, Shrinivasa K; Andrade-Sanchez, Pedro; Sviridova, Nina V

    2017-03-01

    Real-world processes are often combinations of deterministic and stochastic processes. Soil failure observed during farm tillage is one example of this phenomenon. In this paper, we investigated the nonlinear features of soil failure patterns in a farm tillage process. We demonstrate emerging determinism in soil failure patterns from stochastic processes under specific soil conditions. We normalized the deterministic nonlinear prediction considering autocorrelation and propose it as a robust way of extracting a nonlinear dynamical system from noise contaminated motion. Soil is a typical granular material. The results obtained here are expected to be applicable to granular materials in general. From a global scale to nano scale, the granular material is featured in seismology, geotechnology, soil mechanics, and particle technology. The results and discussions presented here are applicable in these wide research areas. The proposed method and our findings are useful with respect to the application of nonlinear dynamics to investigate complex motions generated from granular materials.

  15. Patterns in coupled water and energy cycle: Modeling, synthesis with observations, and assessing the subsurface-landsurface interactions

    NASA Astrophysics Data System (ADS)

    Rahman, A.; Kollet, S. J.; Sulis, M.

    2013-12-01

    In the terrestrial hydrological cycle, the atmosphere and the free groundwater table act as the upper and lower boundary condition, respectively, in the non-linear two-way exchange of mass and energy across the land surface. Identifying and quantifying the interactions among various atmospheric-subsurface-landsurface processes is complicated due to the diverse spatiotemporal scales associated with these processes. In this study, the coupled subsurface-landsurface model ParFlow.CLM was applied over a ~28,000 km2 model domain encompassing the Rur catchment, Germany, to simulate the fluxes of the coupled water and energy cycle. The model was forced by hourly atmospheric data from the COSMO-DE model (numerical weather prediction system of the German Weather Service) over one year. Following a spinup period, the model results were synthesized with observed river discharge, soil moisture, groundwater table depth, temperature, and landsurface energy flux data at different sites in the Rur catchment. It was shown that the model is able to reproduce reasonably the dynamics and also absolute values in observed fluxes and state variables without calibration. The spatiotemporal patterns in simulated water and energy fluxes as well as the interactions were studied using statistical, geostatistical and wavelet transform methods. While spatial patterns in the mass and energy fluxes can be predicted from atmospheric forcing and power law scaling in the transition and winter months, it appears that, in the summer months, the spatial patterns are determined by the spatially correlated variability in groundwater table depth. Continuous wavelet transform techniques were applied to study the variability of the catchment average mass and energy fluxes at varying time scales. From this analysis, the time scales associated with significant interactions among different mass and energy balance components were identified. The memory of precipitation variability in subsurface hydrodynamics

  16. Infant feeding patterns in families with a diabetes history – observations from The Environmental Determinants of Diabetes in the Young (TEDDY) birth cohort study

    PubMed Central

    Hummel, Sandra; Vehik, Kendra; Uusitalo, Ulla; McLeod, Wendy; Aronsson, Carin Andrén; Frank, Nicole; Gesualdo, Patricia; Yang, Jimin; Norris, Jill M; Virtanen, Suvi M

    2014-01-01

    Objective To assess the association between diabetes family history and infant feeding patterns. Design Data on breast-feeding duration and age at first introduction of cow’s milk and gluten-containing cereals were collected in 3-month intervals during the first 24 months of life. Setting Data from the multicentre TEDDY (The Environmental Determinants of Diabetes in the Young) study, including centres in the USA, Sweden, Finland and Germany. Subjects A total of 7026 children, including children with a mother with type 1 diabetes (T1D; n 292), gestational diabetes mellitus (GDM; n 404) or without diabetes but with a father and/or sibling with T1D (n 464) and children without diabetes family history (n 5866). Results While exclusive breast-feeding ended earlier and cow’s milk was introduced earlier in offspring of mothers with T1D and GDM, offspring of non-diabetic mothers but a father and/or sibling with T1D were exclusively breast-fed longer and introduced to cow’s milk later compared with infants without diabetes family history. The association between maternal diabetes and shorter exclusive breast-feeding duration was attenuated after adjusting for clinical variables (delivery mode, gestational age, Apgar score and birth weight). Country-specific analyses revealed differences in these associations, with Sweden showing the strongest and Finland showing no association between maternal diabetes and breast-feeding duration. Conclusions Family history of diabetes is associated with infant feeding patterns; however, the associations clearly differ by country, indicating that cultural differences are important determinants of infant feeding behaviour. These findings need to be considered when developing strategies to improve feeding patterns in infants with a diabetes family history. PMID:24477208

  17. Quantum Beating Patterns Observed in the Energetics of Pb Film Nanostructures

    NASA Astrophysics Data System (ADS)

    Czoschke, P.; Hong, Hawoong; Basile, L.; Chiang, T.-C.

    2004-07-01

    We have studied the nanoscale structural evolution of Pb films grown at 110K on a Si(111) substrate as they are annealed to increasingly higher temperatures. Surface x-ray diffraction from a synchrotron source is used to observe the morphology evolve from an initial smooth film through various metastable states before reaching a state of local equilibrium, at which point the coverage of different height Pb structures is analyzed and related to the thickness-dependent surface energy. Rich patterns are seen in the resulting energy landscape similar to the beating patterns heard from the interference of two musical notes of similar pitch. The explanation is, however, very simple, as demonstrated by a model calculation based on the confinement of free electrons to a quantum well.

  18. Quantum beating patterns observed in the energetics of Pb film nanostructures.

    PubMed

    Czoschke, P; Hong, Hawoong; Basile, L; Chiang, T-C

    2004-07-16

    We have studied the nanoscale structural evolution of Pb films grown at 110 K on a Si(111) substrate as they are annealed to increasingly higher temperatures. Surface x-ray diffraction from a synchrotron source is used to observe the morphology evolve from an initial smooth film through various metastable states before reaching a state of local equilibrium, at which point the coverage of different height Pb structures is analyzed and related to the thickness-dependent surface energy. Rich patterns are seen in the resulting energy landscape similar to the beating patterns heard from the interference of two musical notes of similar pitch. The explanation is, however, very simple, as demonstrated by a model calculation based on the confinement of free electrons to a quantum well.

  19. Nanoscale observation of local bound charges of patterned protein arrays by scanning force microscopy

    NASA Astrophysics Data System (ADS)

    Oh, Y. J.; Jo, W.; Kim, S.; Park, S.; Kim, Y. S.

    2008-09-01

    A protein patterned surface using micro-contact printing methods has been investigated by scanning force microscopy. Electrostatic force microscopy (EFM) was utilized for imaging the topography and detecting the electrical properties such as the local bound charge distribution of the patterned proteins. It was found that the patterned IgG proteins are arranged down to 1 µm, and the 90° rotation of patterned anti-IgG proteins was successfully undertaken. Through the estimation of the effective areas, it was possible to determine the local bound charges of patterned proteins which have opposite electrostatic force behaviors. Moreover, we studied the binding probability between IgG and anti-IgG in a 1 µm2 MIMIC system by topographic and electrostatic signals for applicable label-free detections. We showed that the patterned proteins can be used for immunoassay of proteins on the functional substrate, and that they can also be used for bioelectronics device application, indicating distinct advantages with regard to accuracy and a label-free detection.

  20. Feasibility of observer system for determining orientation of balloon borne observational platforms

    NASA Technical Reports Server (NTRS)

    Nigro, N. J.; Gagliardi, J. C.

    1982-01-01

    An observer model for predicting the orientation of balloon borne research platforms was developed. The model was employed in conjunction with data from the LACATE mission in order to determine the platform orientation as a function of time.

  1. Detecting potential anomalies in projections of rainfall trends and patterns using human observations

    NASA Astrophysics Data System (ADS)

    Kohfeld, K. E.; Savo, V.; Sillmann, J.; Morton, C.; Lepofsky, D.

    2016-12-01

    Shifting precipitation patterns are a well-documented consequence of climate change, but their spatial variability is particularly difficult to assess. While the accuracy of global models has increased, specific regional changes in precipitation regimes are not well captured by these models. Typically, researchers who wish to detect trends and patterns in climatic variables, such as precipitation, use instrumental observations. In our study, we combined observations of rainfall by subsistence-oriented communities with several metrics of rainfall estimated from global instrumental records for comparable time periods (1955 - 2005). This comparison was aimed at identifying: 1) which rainfall metrics best match human observations of changes in precipitation; 2) areas where local communities observe changes not detected by global models. The collated observations ( 3800) made by subsistence-oriented communities covered 129 countries ( 1830 localities). For comparable time periods, we saw a substantial correspondence between instrumental records and human observations (66-77%) at the same locations, regardless of whether we considered trends in general rainfall, drought, or extreme rainfall. We observed a clustering of mismatches in two specific regions, possibly indicating some climatic phenomena not completely captured by the currently available global models. Many human observations also indicated an increased unpredictability in the start, end, duration, and continuity of the rainy seasons, all of which may hamper the performance of subsistence activities. We suggest that future instrumental metrics should capture this unpredictability of rainfall. This information would be important for thousands of subsistence-oriented communities in planning, coping, and adapting to climate change.

  2. Preservice Elementary Teachers' Knowledge of Observable Moon Phases and Pattern of Change in Phases

    ERIC Educational Resources Information Center

    Trundle, Kathy Cabe; Atwood, Ronald K.; Christopher, John E.

    2006-01-01

    The purpose of this study was to describe selected content knowledge held by 52 preservice elementary teachers about the observable phases of the moon and the monthly pattern of change in observable phases. Data were obtained from participants in a physics course before and after they received inquiry-based instruction designed to promote…

  3. Observer-Pattern Modeling and Slow-Scale Bifurcation Analysis of Two-Stage Boost Inverters

    NASA Astrophysics Data System (ADS)

    Zhang, Hao; Wan, Xiaojin; Li, Weijie; Ding, Honghui; Yi, Chuanzhi

    2017-06-01

    This paper deals with modeling and bifurcation analysis of two-stage Boost inverters. Since the effect of the nonlinear interactions between source-stage converter and load-stage inverter causes the “hidden” second-harmonic current at the input of the downstream H-bridge inverter, an observer-pattern modeling method is proposed by removing time variance originating from both fundamental frequency and hidden second harmonics in the derived averaged equations. Based on the proposed observer-pattern model, the underlying mechanism of slow-scale instability behavior is uncovered with the help of eigenvalue analysis method. Then eigenvalue sensitivity analysis is used to select some key system parameters of two-stage Boost inverter, and some behavior boundaries are given to provide some design-oriented information for optimizing the circuit. Finally, these theoretical results are verified by numerical simulations and circuit experiment.

  4. Extreme events and single-pulse spatial patterns observed in a self-pulsing all-solid-state laser

    NASA Astrophysics Data System (ADS)

    Bonazzola, Carlos; Hnilo, Alejandro; Kovalsky, Marcelo; Tredicce, Jorge

    2018-03-01

    The passively Q -switched, self-pulsing all-solid-state laser is a device of widespread use in many applications. Depending on the condition of saturation of the absorber, which is easy to adjust, different dynamical regimes are observed: continuous-wave emission, stable oscillations, period doubling bifurcations, chaos, and, within some chaotic regimes, extreme events (EEs) in the form of pulses of extraordinary intensity. These pulses are sometimes called "dissipative optical rogue waves." The mechanism of their formation in this laser is unknown. Previous observations suggest they are caused by the interaction of a few transverse modes. Here we report a direct observation of the pulse-to-pulse evolution of the transverse pattern. In the periodical regimes, sequences of intensities are correlated with sequences of patterns. In the chaotic ones, a few different patterns alternate, and the EEs are related with even fewer ones. In addition, the series of patterns and the pulse intensities before and after an EE are markedly repetitive. These observations demonstrate that EEs follow a deterministic evolution, and that they can appear even in a system with few interacting modes. This information plays a crucial role for the development of a mathematical description of EEs in this laser. This would allow managing the formation of EE through control of chaos, which is of both academic and practical interest (laser rangefinder).

  5. Extreme events and single-pulse spatial patterns observed in a self-pulsing all-solid-state laser.

    PubMed

    Bonazzola, Carlos; Hnilo, Alejandro; Kovalsky, Marcelo; Tredicce, Jorge

    2018-03-01

    The passively Q-switched, self-pulsing all-solid-state laser is a device of widespread use in many applications. Depending on the condition of saturation of the absorber, which is easy to adjust, different dynamical regimes are observed: continuous-wave emission, stable oscillations, period doubling bifurcations, chaos, and, within some chaotic regimes, extreme events (EEs) in the form of pulses of extraordinary intensity. These pulses are sometimes called "dissipative optical rogue waves." The mechanism of their formation in this laser is unknown. Previous observations suggest they are caused by the interaction of a few transverse modes. Here we report a direct observation of the pulse-to-pulse evolution of the transverse pattern. In the periodical regimes, sequences of intensities are correlated with sequences of patterns. In the chaotic ones, a few different patterns alternate, and the EEs are related with even fewer ones. In addition, the series of patterns and the pulse intensities before and after an EE are markedly repetitive. These observations demonstrate that EEs follow a deterministic evolution, and that they can appear even in a system with few interacting modes. This information plays a crucial role for the development of a mathematical description of EEs in this laser. This would allow managing the formation of EE through control of chaos, which is of both academic and practical interest (laser rangefinder).

  6. Genomic determinants of epidermal appendage patterning and structure in domestic birds

    PubMed Central

    Boer, Elena F.; Van Hollebeke, Hannah F.; Shapiro, Michael D.

    2017-01-01

    Variation in regional identity, patterning, and structure of epidermal appendages contributes to skin diversity among many vertebrate groups, and is perhaps most striking in birds. In pioneering work on epidermal appendage patterning, John Saunders and his contemporaries took advantage of epidermal appendage diversity within and among domestic chicken breeds to establish the importance of mesoderm-ectoderm signaling in determining skin patterning. Diversity in chickens and other domestic birds, including pigeons, is driving a new wave of research to dissect the molecular genetic basis of epidermal appendage patterning. Domestic birds are not only outstanding models for embryonic manipulations, as Saunders recognized, but they are also ideal genetic models for discovering the specific genes that control normal development and the mutations that contribute to skin diversity. Here, we review recent genetic and genomic approaches to uncover the basis of epidermal macropatterning, micropatterning, and structural variation. We also present new results that confirm expression changes in two limb identity genes in feather-footed pigeons, a case of variation in appendage structure and identity. PMID:28347644

  7. Genomic determinants of epidermal appendage patterning and structure in domestic birds.

    PubMed

    Boer, Elena F; Van Hollebeke, Hannah F; Shapiro, Michael D

    2017-09-15

    Variation in regional identity, patterning, and structure of epidermal appendages contributes to skin diversity among many vertebrate groups, and is perhaps most striking in birds. In pioneering work on epidermal appendage patterning, John Saunders and his contemporaries took advantage of epidermal appendage diversity within and among domestic chicken breeds to establish the importance of mesoderm-ectoderm signaling in determining skin patterning. Diversity in chickens and other domestic birds, including pigeons, is driving a new wave of research to dissect the molecular genetic basis of epidermal appendage patterning. Domestic birds are not only outstanding models for embryonic manipulations, as Saunders recognized, but they are also ideal genetic models for discovering the specific genes that control normal development and the mutations that contribute to skin diversity. Here, we review recent genetic and genomic approaches to uncover the basis of epidermal macropatterning, micropatterning, and structural variation. We also present new results that confirm expression changes in two limb identity genes in feather-footed pigeons, a case of variation in appendage structure and identity. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  8. Ignimbrite textural properties as determinants of endolithic colonization patterns from hyper-arid Atacama Desert.

    PubMed

    Cámara, Beatriz; Suzuki, Shino; Nealson, Kenneth H; Wierzchos, Jacek; Ascaso, Carmen; Artieda, Octavio; de los Ríos, Asunción

    2014-12-01

    This study explores the photosynthetic microbial colonization of rhyolitic ignimbrites in Lomas de Tilocalar, a hyper-arid region of the Atacama Desert, Chile. Colonization appeared in the form of a green layer a few millimeters beneath the ignimbrite surface. Some ignimbrite rocks revealed two distinct micromorphological areas of identical mineralogical and chemical composition but different textural properties. According to texture, colonization patterns varied in terms of the extension and depth of colonization. The diversity of photosynthetic microorganisms was assessed by denaturing gradient gel electrophoresis (DGGE) of the 23S rRNA gene and by generating clone libraries of the 16S rRNA gene. We observed a low diversity of photosynthetic microorganisms colonizing the ignimbrite microhabitat. Most rRNA gene sequences recovered greatly resembled those of Chroococcidiopsis hypolith clones from arid deserts. These results point to highly restrictive conditions of the hyper-arid Atacama Desert conditioning the diversity of cyanobacteria, and suggest that microbial colonization and composition patterns might be determined by the microscale physico-chemical properties of the ignimbrite rocks. Copyright© by the Spanish Society for Microbiology and Institute for Catalan Studies.

  9. Determination of nuclear quadrupolar parameters using singularities in field-swept NMR patterns.

    PubMed

    Ichijo, Naoki; Takeda, Kazuyuki; Yamada, Kazuhiko; Takegoshi, K

    2016-10-07

    We propose a simple data-analysis scheme to determine the coupling constant and the asymmetry parameter of nuclear quadrupolar interactions in field-swept nuclear magnetic resonance (NMR) for static powder samples. This approach correlates the quadrupolar parameters to the positions of the singularities, which can readily be found out as sharp peaks in the field-swept pattern. Moreover, the parameters can be determined without quantitative acquisition and elaborate calculation of the overall profile of the pattern. Since both experimental and computational efforts are significantly reduced, the approach presented in this work will enhance the power of the field-swept NMR for yet unexplored quadrupolar nuclei. We demonstrate this approach in 33 S in α-S 8 and 35 Cl in chloranil. The accuracy of the obtained quadrupolar parameters is also discussed.

  10. Saw-tooth pattern from flux jumps observed by high resolution M-H curves in MgB2 thin films

    NASA Astrophysics Data System (ADS)

    Lee, Jae-Yeap; Lee, Hu-Jong; Jung, Myung-Hwa; Lee, Sung-Ik; Choi, Eun-Mi; Kang, W. N.

    2010-08-01

    While flux jumps have been observed in the magnetic hysteresis loops of superconductors, a saw-tooth pattern of the flux jump is known to appear only in a bulk superconductor. But in this study, we were able to observe the saw-tooth pattern in MgB2 thin film with the careful data acquisition method enhancing the data taking capability and report the details of the distribution of the field interval between jumps Bfj, and the size of the flux jump, Mfj. The theory based on Bean's model in the adiabatic approach was adapted and it was compared with experimental results. In addition, we observe the cross-over between the saw-tooth pattern and a rounded saw-tooth pattern, as a byproduct. A patterns diagram of the vortex jump was drawn on the H-T plane.

  11. Patterns of shading tolerance determined from experimental light reduction studies of seagrasses

    EPA Science Inventory

    An extensive review of the experimental literature on seagrass shading evaluated the relationship between experimental light reductions, duration of experiment and seagrass response metrics to determine whether there were consistent statistical patterns. There were highly signif...

  12. Spatially-resolved mean flow and turbulence help explain observed erosion and deposition patterns of snow over Antarctic sea ice

    NASA Astrophysics Data System (ADS)

    Trujillo, E.; Giometto, M. G.; Leonard, K. C.; Maksym, T. L.; Meneveau, C. V.; Parlange, M. B.; Lehning, M.

    2014-12-01

    Sea ice-atmosphere interactions are major drivers of patterns of sea ice drift and deformations in the Polar regions, and affect snow erosion and deposition at the surface. Here, we combine analyses of sea ice surface topography at very high-resolutions (1-10 cm), and Large Eddy Simulations (LES) to study surface drag and snow erosion and deposition patterns from process scales to floe scales (1 cm - 100 m). The snow/ice elevations were obtained using a Terrestrial Laser Scanner during the SIPEX II (Sea Ice Physics and Ecosystem eXperiment II) research voyage to East Antarctica (September-November 2012). LES are performed on a regular domain adopting a mixed pseudo-spectral/finite difference spatial discretization. A scale-dependent dynamic subgrid-scale model based on Lagrangian time averaging is adopted to determine the eddy-viscosity in the bulk of the flow. Effects of larger-scale features of the surface on wind flows (those features that can be resolved in the LES) are accounted for through an immersed boundary method. Conversely, drag forces caused by subgrid-scale features of the surface should be accounted for through a parameterization. However, the effective aerodynamic roughness parameter z0 for snow/ice is not known. Hence, a novel dynamic approach is utilized, in which z0 is determined using the constraint that the total momentum flux (drag) must be independent on grid-filter scale. We focus on three ice floe surfaces. The first of these surfaces (October 6, 2012) is used to test the performance of the model, validate the algorithm, and study the spatial distributed fields of resolved and modeled stress components. The following two surfaces, scanned at the same location before and after a snow storm event (October 20/23, 2012), are used to propose an application to study how spatially resolved mean flow and turbulence relates to observed patterns of snow erosion and deposition. We show how erosion and deposition patterns are correlated with the

  13. Characteristics of proportionate growth observed in instability patterns of miscible fluids

    NASA Astrophysics Data System (ADS)

    Bischofberger, Irmgard; Ramachandran, Radha; Nagel, Sidney R.; Nagel lab Team

    2014-11-01

    As a baby mammal grows, different parts of its body develop at the nearly the same rate and thus to a good approximation in direct proportion to one another. This type of growth is called proportionate growth. As familiar as it appears to us, it is very rarely found in physical systems outside of the biological world. We here show an example of proportionate growth that occurs in the instability formed when a less viscous liquid, of viscosity ηin displaces a more viscous miscible one, of viscosity ηout. We investigate the growth of these patterns in a quasi-two-dimensional geometry. Within a range of viscosity ratios 0.1 <ηin /ηout <0.3, we observe the formation of small blunt structures that form at the edges of an inner circular region devoid of fingers. As the pattern grows, the size of these structures increases in proportion to the size of the inner circle, such that even small details in the shape of the pattern remain essentially unchanged during growth. These characteristics of proportionate growth are reflected in the shape of the interface in the third dimension as well.

  14. Feasibility of observer system for determining orientation of balloon borne observational platforms

    NASA Technical Reports Server (NTRS)

    Nigro, N. J.; Gagliardi, J. C.

    1982-01-01

    The instantaneous orientation (i.e., the attitude) of the LACATE instrumentation platform with respect to a local vertical is discussed. An observer model for predicting the orientation of balloon-borne research platforms is described. Determination of the platform orientation as a function of time is addressed.

  15. Observations of Local Positive Low Cloud Feedback Patterns and Their Role in Internal Variability and Climate Sensitivity

    NASA Astrophysics Data System (ADS)

    Yuan, Tianle; Oreopoulos, Lazaros; Platnick, Steven E.; Meyer, Kerry

    2018-05-01

    Modeling studies have shown that cloud feedbacks are sensitive to the spatial pattern of sea surface temperature (SST) anomalies, while cloud feedbacks themselves strongly influence the magnitude of SST anomalies. Observational counterparts to such patterned interactions are still needed. Here we show that distinct large-scale patterns of SST and low-cloud cover (LCC) emerge naturally from objective analyses of observations and demonstrate their close coupling in a positive local SST-LCC feedback loop that may be important for both internal variability and climate change. The two patterns that explain the maximum amount of covariance between SST and LCC correspond to the Interdecadal Pacific Oscillation and the Atlantic Multidecadal Oscillation, leading modes of multidecadal internal variability. Spatial patterns and time series of SST and LCC anomalies associated with both modes point to a strong positive local SST-LCC feedback. In many current climate models, our analyses suggest that SST-LCC feedback strength is too weak compared to observations. Modeled local SST-LCC feedback strength affects simulated internal variability so that stronger feedback produces more intense and more realistic patterns of internal variability. To the extent that the physics of the local positive SST-LCC feedback inferred from observed climate variability applies to future greenhouse warming, we anticipate significant amount of delayed warming because of SST-LCC feedback when anthropogenic SST warming eventually overwhelm the effects of internal variability that may mute anthropogenic warming over parts of the ocean. We postulate that many climate models may be underestimating both future warming and the magnitude of modeled internal variability because of their weak SST-LCC feedback.

  16. Judging a salmon by its spots: environmental variation is the primary determinant of spot patterns in Salmo salar.

    PubMed

    Jørgensen, Katarina M; Solberg, Monica F; Besnier, Francois; Thorsen, Anders; Fjelldal, Per Gunnar; Skaala, Øystein; Malde, Ketil; Glover, Kevin A

    2018-04-12

    In fish, morphological colour changes occur from variations in pigment concentrations and in the morphology, density, and distribution of chromatophores in the skin. However, the underlying mechanisms remain unresolved in most species. Here, we describe the first investigation into the genetic and environmental basis of spot pattern development in one of the world's most studied fishes, the Atlantic salmon. We reared 920 salmon from 64 families of domesticated, F1-hybrid and wild origin in two contrasting environments (Hatchery; tanks for the freshwater stage and sea cages for the marine stage, and River; a natural river for the freshwater stage and tanks for the marine stage). Fish were measured, photographed and spot patterns evaluated. In the Hatchery experiment, significant but modest differences in spot density were observed among domesticated, F1-hybrid (1.4-fold spottier than domesticated) and wild salmon (1.7-fold spottier than domesticated). A heritability of 6% was calculated for spot density, and a significant QTL on linkage group SSA014 was detected. In the River experiment, significant but modest differences in spot density were also observed among domesticated, F1-hybrid (1.2-fold spottier than domesticated) and wild salmon (1.8-fold spottier than domesticated). Domesticated salmon were sevenfold spottier in the Hatchery vs. River experiment. While different wild populations were used for the two experiments, on average, these were 6.2-fold spottier in the Hatchery vs. River experiment. Fish in the Hatchery experiment displayed scattered to random spot patterns while fish in the River experiment displayed clustered spot patterns. These data demonstrate that while genetics plays an underlying role, environmental variation represents the primary determinant of spot pattern development in Atlantic salmon.

  17. Gender Stereotypic Interest Patterns as Determinants of Cognitive Abilities in Transsexuals.

    ERIC Educational Resources Information Center

    Blanco, Mark R.; Heritage, Jeanette G.

    The designation "transsexual" refers to those who persistently believe their gender to be incongruous with their anatomical morphology. This study involves a group of 21 female sexual reversal surgery (SRS) candidates and a group of 59 male SRS candidates to observe if transsexual cognitive ability patterns are correlated with levels of…

  18. Accuracy of Satellite Optical Observations and Precise Orbit Determination

    NASA Astrophysics Data System (ADS)

    Shakun, L.; Koshkin, N.; Korobeynikova, E.; Strakhova, S.; Dragomiretsky, V.; Ryabov, A.; Melikyants, S.; Golubovskaya, T.; Terpan, S.

    The monitoring of low-orbit space objects (LEO-objects) is performed in the Astronomical Observatory of Odessa I.I. Mechnikov National University (Ukraine) for many years. Decades-long archives of these observations are accessible within Ukrainian network of optical observers (UMOS). In this work, we give an example of orbit determination for the satellite with the 1500-km height of orbit based on angular observations in our observatory (Int. No. 086). For estimation of the measurement accuracy and accuracy of determination and propagation of satellite position, we analyze the observations of Ajisai satellite with the well-determined orbit. This allows making justified conclusions not only about random errors of separate measurements, but also to analyze the presence of systematic errors, including external ones to the measurement process. We have shown that the accuracy of one measurement has the standard deviation about 1 arcsec across the track and 1.4 arcsec along the track and systematical shifts in measurements of one track do not exceed 0.45 arcsec. Ajisai position in the interval of the orbit fitting is predicted with accuracy better than 30 m along the orbit and better than 10 m across the orbit for any its point.

  19. Observations and Measurements Design Patterns within INSPIRE

    NASA Astrophysics Data System (ADS)

    Schleidt, K.; Cox, S.; Grellet, S.; Lowe, D.; Lutz, M.; Portele, C.; Sarretta, A.; Ventouras, S.

    2012-04-01

    Several INSPIRE spatial data themes have been specified so that their scope, in addition to classical geographic information, includes measured, modelled or simulated data. The FprEN ISO 19156 standard on Observations and Measurements (O&M) was designed for the explicit purpose of creating application schemas for such data, and thus shall be used in INSPIRE as a basis for developing data models for these themes. The following INSPIRE themes have identified O&M as integrally relevant to their thematic domain and are including elements of O&M in their data specifications: • Geology • Oceanographic geographical features • Atmospheric conditions and Meteorological geographical features • Environmental monitoring facilities • Soil In addition to these themes, several other INSPIRE themes have been identified to which observational information, while not at the core of the data specification, is relevant. Some examples of this are the INSPIRE theme "Species distribution", where primary occurrence data could be provided together with the aggregate distribution, as well as "Industrial and production facilities", where the provision of emissions data on such facilities would be useful for various environmental reporting obligations. While the O&M standard provides a generic framework for the provision of measurement data, it is also kept very abstract, and there are many ways of implementing the core structures in specific application schemas. In order to assure the consistent application of the O&M classes and properties across different INSPIRE themes, a cross-thematic working group on the use of O&M in INSPIRE has been convened. This group has analysed the requirements towards O&M within INSPIRE, identified the types of O&M design patterns required in INSPIRE and developed both additional classes identified as necessary within INSPIRE as well as guidelines detailing how this standard is to be used within INSPIRE. Some examples for these additional classes are

  20. Patterns in Crew-Initiated Photography of Earth from ISS - Is Earth Observation a Salutogenic Experience?

    NASA Technical Reports Server (NTRS)

    Robinson, Julie A.; Slack, Kelley J.; Olson, Valerie A.; Trenchard, Mike; Willis, Kim; Baskin, Pam; Ritsher, Jennifer Boyd

    2006-01-01

    To provide for the well-being of crewmembers on future exploration missions, understanding how space station crewmembers handle the inherently stressful isolation and confinement during long-duration missions is important. A recent retrospective survey of previously flown astronauts found that the most commonly reported psychologically enriching aspects of spaceflight had to do with their Perceptions of Earth. Crewmembers onboard the International Space Station (ISS) photograph Earth through the station windows. Some of these photographs are in response to requests from scientists on the ground through the Crew Earth Observations (CEO) payload. Other photographs taken by crewmembers have not been in response to these formal requests. The automatically recorded data from the camera provides a dataset that can be used to test hypotheses about factors correlated with self-initiated crewmember photography. The present study used objective in-flight data to corroborate the previous questionnaire finding and to further investigate the nature of voluntary Earth-Observation activity. We examined the distribution of photographs with respect to time, crew, and subject matter. We also determined whether the frequency fluctuated in conjunction with major mission events such as vehicle dockings, and extra-vehicular activities (EVAs, or spacewalks), relative to the norm for the relevant crew. We also examined the influence of geographic and temporal patterns on frequency of Earth photography activities. We tested the hypotheses that there would be peak photography intensity over locations of personal interest, and on weekends. From December 2001 through October 2005 (Expeditions 4-11) crewmembers took 144,180 photographs of Earth with time and date automatically recorded by the camera. Of the time-stamped photographs, 84.5% were crew-initiated, and not in response to CEO requests. Preliminary analysis indicated some phasing in patterns of photography during the course of a

  1. Observational and modeling studies of heat, moisture, precipitation, and global-scale circulation patterns

    NASA Technical Reports Server (NTRS)

    Vincent, Dayton G.; Robertson, Franklin

    1993-01-01

    The research sponsored by this grant is a continuation and an extension of the work conducted under a previous contract, 'South Pacific Convergence Zone and Global-Scale Circulations'. In the prior work, we conducted a detailed investigation of the South Pacific convergence zone (SPCZ), and documented many of its significant features and characteristics. We also conducted studies of its interaction with global-scale circulation features through the use of both observational and modeling studies. The latter was accomplished toward the end of the contract when Dr. James Hurrell, then a Ph.D. candidate, successfully ported the NASA GLA general circulation model (GCM) to Purdue University. In our present grant, we have expanded our previous research to include studies of other convectively-driven circulation systems in the tropics besides the SPCZ. Furthermore, we have continued to examine the relationship between these convective systems and global-scale circulation patterns. Our recent research efforts have focused on three objectives: (1) determining the periodicity of large-scale bands of organized convection in the tropics, primarily synoptic to intraseasonal time scales in the Southern Hemisphere; (2) examining the relative importance of tropical versus mid-latitude forcing for Southern Hemisphere summertime subtropical jets, particularly over the Pacific Ocean; and (3) estimating tropical precipitation, especially over oceans, using observational and budget methods. A summary list of our most significant accomplishments in the past year is given.

  2. Breast-feeding patterns and factors determining exclusive breast-feeding.

    PubMed

    Koosha, A; Hashemifesharaki, R; Mousavinasab, N

    2008-12-01

    Breast-feeding is a major determinant of infants' health and survival. The aim of this study was to examine breast-feeding patterns and the role of some factors on exclusive breast-feeding. The study was done at the Health Centre of Community Oriented Medical Education of Zanjan City, Iran. Mothers of 650 infants younger than one year of age were interviewed directly by healthcare providers. The necessary information was recorded on pre-structured questionnaires, and the feeding patterns of all infants were determined. The rate of breast-feeding was greater than 92 percent during the first year of life. Exclusive breast-feeding rate in the first five days of life was 82 percent, but it declined to 44 percent at the first month. The chance of exclusive breast-feeding was higher in infants who were on demand feeding (odds ratio [OR] 2.6), breastfed more than eight times per day (OR 2.23), and their birth weight ranged from 2.5 to 4 kg (OR 2.16). This chance was less among infants exposed to pacifiers (OR 2.62) and with the numbers of deliveries equal to or more than three (OR 2.25). The rates of breast-feeding initiation and its duration at six and 12 months were higher than the national goal. The rate of exclusive breast-feeding was nearly 44 percent. It seems necessary to elucidate the role of other factors, such as socioeconomic status, on exclusive breast-feeding.

  3. Novel use patterns of Salvia divinorum: unobtrusive observation using YouTube™.

    PubMed

    Casselman, Ivan; Heinrich, Michael

    2011-12-08

    ETHNOPHARMACOLOGICAL RELEVANCE AND AIMS: The traditional use of the Hallucinogenic sage, Salvia divinorum has been of ethnopharmalogical interest for some time. This plant, endemic to Oaxaca Mexico and traditionally used by the Mazatec, is now utilized worldwide for its psychoactive effects. This use demonstrates a novel use pattern which is distinctly different from Mazatec use. This study offers a new methodology to study emerging global plant use and assesses the users' experience with it. The aim of this research was to develop a new methodology to collect and analyze archived data on the World Wide Web, specifically videos which depict Salvia divinorum use. The basis of the methodology for this project was unobtrusive observation which allows the researcher to observe without influencing the event which is being observed. Qualitative, ethnographic data was used in conjunction with quantitative meta data collected by a customized web crawler programed to archive YouTube™ data. Using this methodology enabled us to understand reported uses and the users' experiences as expressed on the World Wide Web. The main result of this research was the documentation of a distinct, novel use pattern of Salvia divinorum which has developed outside of Oaxaca; a use pattern which differs in a number of ways from traditional, Mazatec use. The majority of the YouTube™ videos analyzed were found to present indications of a positive Salvia divinorum experience. This result highlighted the contradiction between ethnographic data and what is reported by the media. Finally the representation of Salvia divinorum on YouTube™ (and by inference the WWW as a whole) is a growing phenomena. While anthropological and more specifically medico-anthropological research has, for many years, embraced the dynamics of cultures, until recently, ethnopharmalogical research has generally focused on 'traditional' plant use, failing to capture the dynamic elements of plant/human interaction and

  4. Lung Ultrasound Pattern Is Normal during the Last Gestational Weeks: An Observational Pilot Study.

    PubMed

    Arbeid, Erik; Demi, Alessio; Brogi, Etrusca; Gori, Elisa; Giusto, Teresa; Soldati, Gino; Vetrugno, Luigi; Giunta, Francesco; Forfori, Francesco

    2017-01-01

    The normal lung ultrasound (US) pattern during a regular pregnancy has not been evaluated extensively in the current literature. Pregnancy-related changes in the respiratory tract affect maternal predisposition to several respiratory complications; consequently, it is important to differentiate between a physiologic pattern during pregnancy and a pathologic lung pattern, due to respiratory failure. The goal of our study was to assess the normal US lung pattern in women without known comorbidities in the last weeks of pregnancy. We conducted a prospective cross-sectional observational pilot study. Chest wall was examined in 8 areas, 1 scan for each area with women in supine position. One hundred fifty parturients were enrolled during the 36th-38th gestational weeks. None of the participants showed pleural effusion, pneumothorax or lung consolidation. None presented an interstitial syndrome US pattern. One hundred thirteen participants out of 150 (75%) showed A-lines in all the regions. The remaining 25% showed 1 or 2 B-lines in at least 3 regions. Only 2 participants showed 2 positive regions also. We found that, in the majority of the women examined, the lung US pattern matches the physiological pattern in non-pregnant patients. Lung US assessment is a feasible and a helpful diagnostic tool during pregnancy. © 2016 S. Karger AG, Basel.

  5. Pattern placement errors: application of in-situ interferometer-determined Zernike coefficients in determining printed image deviations

    NASA Astrophysics Data System (ADS)

    Roberts, William R.; Gould, Christopher J.; Smith, Adlai H.; Rebitz, Ken

    2000-08-01

    Several ideas have recently been presented which attempt to measure and predict lens aberrations for new low k1 imaging systems. Abbreviated sets of Zernike coefficients have been produced and used to predict Across Chip Linewidth Variation. Empirical use of the wavefront aberrations can now be used in commercially available lithography simulators to predict pattern distortion and placement errors. Measurement and Determination of Zernike coefficients has been a significant effort of many. However the use of this data has generally been limited to matching lenses or picking best fit lense pairs. We will use wavefront aberration data collected using the Litel InspecStep in-situ Interferometer as input data for Prolith/3D to model and predict pattern placement errors and intrafield overlay variation. Experiment data will be collected and compared to the simulated predictions.

  6. Assessment of Multi-frequency Electromagnetic Induction for Determining Soil Moisture Patterns at the Hillslope Scale

    NASA Astrophysics Data System (ADS)

    Tromp-van Meerveld, I.; McDonnell, J.

    2009-05-01

    We present an assessment of electromagnetic induction (EM) as a potential rapid and non-invasive method to map soil moisture patterns at the Panola (GA, USA) hillslope. We address the following questions regarding the applicability of EM measurements for hillslope hydrological investigations: (1) Can EM be used for soil moisture measurements in areas with shallow soils?; (2) Can EM represent the temporal and spatial patterns of soil moisture throughout the year?; and (3) can multiple frequencies be used to extract additional information content from the EM approach and explain the depth profile of soil moisture? We found that the apparent conductivity measured with the multi-frequency GEM-300 was linearly related to soil moisture measured with an Aqua-pro capacitance sensor below a threshold conductivity and represented the temporal patterns in soil moisture well. During spring rainfall events that wetted only the surface soil layers the apparent conductivity measurements explained the soil moisture dynamics at depth better than the surface soil moisture dynamics. All four EM frequencies (7290, 9090, 11250, and 14010 Hz) were highly correlated and linearly related to each other and could be used to predict soil moisture. This limited our ability to use the four different EM frequencies to obtain a soil moisture profile with depth. The apparent conductivity patterns represented the observed spatial soil moisture patterns well when the individually fitted relationships between measured soil moisture and apparent conductivity were used for each measurement point. However, when the same (master) relationship was used for all measurement locations, the soil moisture patterns were smoothed and did not resemble the observed soil moisture patterns very well. In addition, the range in calculated soil moisture values was reduced compared to observed soil moisture. Part of the smoothing was likely due to the much larger measurement area of the GEM-300 compared to the Aqua

  7. Infiltration pattern in a regolith-fractured bedrock profile: field observation of a dye stain pattern

    NASA Astrophysics Data System (ADS)

    Kim, Jae Gon; Lee, Gyoo Ho; Lee, Jin-Soo; Chon, Chul-Min; Kim, Tack Hyun; Ha, Kyoochul

    2006-02-01

    We examined the infiltration pattern of water in a regolith-bedrock profile consisting of two overburdens (OB1 and OB2), a buried rice paddy soil (PS), two texturally distinctive weathered materials (WM1 and WM2) and a fractured sedimentary rock (BR), using a Brilliant Blue FCF dye tracer. A black-coloured coating in conducting fractures in WM1, WM2 and BR was analysed by X-ray diffraction and scanning electron microscopy. The dye tracer penetrated to greater than 2 m depth in the profile. The macropore flow and saturated interflow were the major infiltration patterns in the profile. Macropore flow and saturated interflow were observed along fractures in WM1, WM2 and BR and at the dipping interfaces of PS-WM1, PS-WM2 and PS-BR respectively. Heterogeneous matrix flow occurred in upper overburden (OB1) and PS. Compared with OB1, the coarser textured OB2 acted as a physical barrier for vertical flow of water. The PS with low bulk density and many fine roots was another major conducting route of water in the profile. Manganese oxide and iron oxide were positively identified in the black coating material and had low crystallinity and high surface area, indicating their high reactivity with conducting contaminants.

  8. Real-time determination of fringe pattern frequencies: An application to pressure measurement

    NASA Astrophysics Data System (ADS)

    Sciammarella, Cesar A.; Piroozan, Parham

    2007-05-01

    Retrieving information in real time from fringe patterns is a topic of a great deal of interest in scientific and engineering applications of optical methods. This paper presents a method for fringe frequency determination based on the capability of neural networks to recognize signals that are similar but not identical to signals used to train the neural network. Sampled patterns are generated by calibration and stored in memory. Incoming patterns are analyzed by a back-propagation neural network at the speed of the recording device, a CCD camera. This method of information retrieval is utilized to measure pressures on a boundary layer flow. The sensor combines optics and electronics to analyze dynamic pressure distributions and to feed information to a control system that is capable to preserve the stability of the flow.

  9. Inter-rater reliability for movement pattern analysis (MPA): measuring patterning of behaviors versus discrete behavior counts as indicators of decision-making style.

    PubMed

    Connors, Brenda L; Rende, Richard; Colton, Timothy J

    2014-01-01

    The unique yield of collecting observational data on human movement has received increasing attention in a number of domains, including the study of decision-making style. As such, interest has grown in the nuances of core methodological issues, including the best ways of assessing inter-rater reliability. In this paper we focus on one key topic - the distinction between establishing reliability for the patterning of behaviors as opposed to the computation of raw counts - and suggest that reliability for each be compared empirically rather than determined a priori. We illustrate by assessing inter-rater reliability for key outcome measures derived from movement pattern analysis (MPA), an observational methodology that records body movements as indicators of decision-making style with demonstrated predictive validity. While reliability ranged from moderate to good for raw counts of behaviors reflecting each of two Overall Factors generated within MPA (Assertion and Perspective), inter-rater reliability for patterning (proportional indicators of each factor) was significantly higher and excellent (ICC = 0.89). Furthermore, patterning, as compared to raw counts, provided better prediction of observable decision-making process assessed in the laboratory. These analyses support the utility of using an empirical approach to inform the consideration of measuring patterning versus discrete behavioral counts of behaviors when determining inter-rater reliability of observable behavior. They also speak to the substantial reliability that may be achieved via application of theoretically grounded observational systems such as MPA that reveal thinking and action motivations via visible movement patterns.

  10. Harnessing AIA Diffraction Patterns to Determine Flare Footpoint Temperatures

    NASA Astrophysics Data System (ADS)

    Bain, H. M.; Schwartz, R. A.; Torre, G.; Krucker, S.; Raftery, C. L.

    2014-12-01

    In the "Standard Flare Model" energy from accelerated electrons is deposited at the footpoints of newly reconnected flare loops, heating the surrounding plasma. Understanding the relation between the multi-thermal nature of the footpoints and the energy flux from accelerated electrons is therefore fundamental to flare physics. Extreme ultraviolet (EUV) images of bright flare kernels, obtained from the Atmospheric Imaging Assembly (AIA) onboard the Solar Dynamics Observatory, are often saturated despite the implementation of automatic exposure control. These kernels produce diffraction patterns often seen in AIA images during the most energetic flares. We implement an automated image reconstruction procedure, which utilizes diffraction pattern artifacts, to de-saturate AIA images and reconstruct the flare brightness in saturated pixels. Applying this technique to recover the footpoint brightness in each of the AIA EUV passbands, we investigate the footpoint temperature distribution. Using observations from the Ramaty High Energy Solar Spectroscopic Imager (RHESSI), we will characterize the footpoint accelerated electron distribution of the flare. By combining these techniques, we investigate the relation between the nonthermal electron energy flux and the temperature response of the flare footpoints.

  11. Assessment of multi-frequency electromagnetic induction for determining soil moisture patterns at the hillslope scale

    NASA Astrophysics Data System (ADS)

    Tromp-van Meerveld, H. J.; McDonnell, J. J.

    2009-04-01

    SummaryHillslopes are fundamental landscape units, yet represent a difficult scale for measurements as they are well-beyond our traditional point-scale techniques. Here we present an assessment of electromagnetic induction (EM) as a potential rapid and non-invasive method to map soil moisture patterns at the hillslope scale. We test the new multi-frequency GEM-300 for spatially distributed soil moisture measurements at the well-instrumented Panola hillslope. EM-based apparent conductivity measurements were linearly related to soil moisture measured with the Aqua-pro capacitance sensor below a threshold conductivity and represented the temporal patterns in soil moisture well. During spring rainfall events that wetted only the surface soil layers the apparent conductivity measurements explained the soil moisture dynamics at depth better than the surface soil moisture dynamics. All four EM frequencies (7.290, 9.090, 11.250, and 14.010 kHz) were highly correlated and linearly related to each other and could be used to predict soil moisture. This limited our ability to use the four different EM frequencies to obtain a soil moisture profile with depth. The apparent conductivity patterns represented the observed spatial soil moisture patterns well when the individually fitted relationships between measured soil moisture and apparent conductivity were used for each measurement point. However, when the same (master) relationship was used for all measurement locations, the soil moisture patterns were smoothed and did not resemble the observed soil moisture patterns very well. In addition the range in calculated soil moisture values was reduced compared to observed soil moisture. Part of the smoothing was likely due to the much larger measurement area of the GEM-300 compared to the soil moisture measurements.

  12. 78 FR 77428 - 2014 Annual Determination for Sea Turtle Observer Requirement

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-12-23

    ... Determination for Sea Turtle Observer Requirement AGENCY: National Marine Fisheries Service (NMFS), National... observing identified fisheries is to learn more about sea turtle interactions in a given fishery, evaluate existing measures to prevent or reduce prohibited sea turtle takes, and to determine whether additional...

  13. 77 FR 75999 - 2013 Annual Determination for Sea Turtle Observer Requirement

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-12-26

    ... Determination for Sea Turtle Observer Requirement AGENCY: National Marine Fisheries Service (NMFS), National... observing identified fisheries is to learn more about sea turtle interactions in a given fishery, evaluate existing measures to prevent or reduce prohibited sea turtle takes, and to determine whether additional...

  14. Determinants of Long-Term Neurological Recovery Patterns Relative to Hospital Discharge Among Cardiac Arrest Survivors.

    PubMed

    Agarwal, Sachin; Presciutti, Alex; Roth, William; Matthews, Elizabeth; Rodriguez, Ashley; Roh, David J; Park, Soojin; Claassen, Jan; Lazar, Ronald M

    2018-02-01

    To explore factors associated with neurological recovery at 1 year relative to hospital discharge after cardiac arrest. Observational, retrospective review of a prospectively collected cohort. Medical or surgical ICUs in a single tertiary care center. Older than 18 years, resuscitated following either in-hospital or out-of-hospital cardiac arrest and considered for targeted temperature management between 2007 and 2013. None. Logistic regressions to determine factors associated with a poor recovery pattern after 1 year, defined as persistent Cerebral Performance Category Score 3-4 or any worsening of Cerebral Performance Category Score relative to discharge status. In total, 30% (117/385) of patients survived to hospital discharge; among those discharged with Cerebral Performance Category Score 1, 2, 3, and 4, good recovery pattern was seen in 54.5%, 48.4%, 39.5%, and 0%, respectively. Significant variables showing trends in associations with a poor recovery pattern (62.5%) in a multivariate model were age more than 70 years (odds ratio, 4; 95% CIs, 1.1-15; p = 0.04), Hispanic ethnicity (odds ratio, 4; CI, 1.2-13; p = 0.02), and discharge disposition (home needing out-patient services (odds ratio, 1), home requiring no additional services (odds ratio, 0.15; CI, 0.03-0.8; p = 0.02), acute rehabilitation (odds ratio, 0.23; CI, 0.06-0.9; p = 0.04). Patients discharged with mild or moderate cerebral dysfunction sustained their risk of neurological worsening within 1 year of cardiac arrest. Old age, Hispanic ethnicity, and discharge disposition of home with out-patient services may be associated with a poor 1 year neurological recovery pattern after hospital discharge from cardiac arrest.

  15. Emission Patterns of Solar Type III Radio Bursts: Stereoscopic Observations

    NASA Technical Reports Server (NTRS)

    Thejappa, G.; MacDowall, R.; Bergamo, M.

    2012-01-01

    Simultaneous observations of solar type III radio bursts obtained by the STEREO A, B, and WIND spacecraft at low frequencies from different vantage points in the ecliptic plane are used to determine their directivity. The heliolongitudes of the sources of these bursts, estimated at different frequencies by assuming that they are located on the Parker spiral magnetic field lines emerging from the associated active regions into the spherically symmetric solar atmosphere, and the heliolongitudes of the spacecraft are used to estimate the viewing angle, which is the angle between the direction of the magnetic field at the source and the line connecting the source to the spacecraft. The normalized peak intensities at each spacecraft Rj = Ij /[Sigma]Ij (the subscript j corresponds to the spacecraft STEREO A, B, and WIND), which are defined as the directivity factors are determined using the time profiles of the type III bursts. It is shown that the distribution of the viewing angles divides the type III bursts into: (1) bursts emitting into a very narrow cone centered around the tangent to the magnetic field with angular width of approximately 2 deg and (2) bursts emitting into a wider cone with angular width spanning from [approx] -100 deg to approximately 100 deg. The plots of the directivity factors versus the viewing angles of the sources from all three spacecraft indicate that the type III emissions are very intense along the tangent to the spiral magnetic field lines at the source, and steadily fall as the viewing angles increase to higher values. The comparison of these emission patterns with the computed distributions of the ray trajectories indicate that the intense bursts visible in a narrow range of angles around the magnetic field directions probably are emitted in the fundamental mode, whereas the relatively weaker bursts visible to a wide range of angles are probably emitted in the harmonic mode.

  16. Decay Pattern of Pygmy States Observed in Neutron-Rich Ne26

    NASA Astrophysics Data System (ADS)

    Gibelin, J.; Beaumel, D.; Motobayashi, T.; Blumenfeld, Y.; Aoi, N.; Baba, H.; Elekes, Z.; Fortier, S.; Frascaria, N.; Fukuda, N.; Gomi, T.; Ishikawa, K.; Kondo, Y.; Kubo, T.; Lima, V.; Nakamura, T.; Saito, A.; Satou, Y.; Scarpaci, J.-A.; Takeshita, E.; Takeuchi, S.; Teranishi, T.; Togano, Y.; Vinodkumar, A. M.; Yanagisawa, Y.; Yoshida, K.

    2008-11-01

    Coulomb excitation of the exotic neutron-rich nucleus Ne26 on a Pb208 target was measured at 58MeV/u in order to search for low-lying E1 strength above the neutron emission threshold. This radioactive beam experiment was carried out at the RIKEN Accelerator Research Facility. Using the invariant mass method in the Ne25+n channel, we observe a sizable amount of E1 strength between 6 and 10 MeV excitation energy. By performing a multipole decomposition of the differential cross section, a reduced dipole transition probability of B(E1)=0.49±0.16e2fm2 is deduced, corresponding to 4.9±1.6% of the Thomas-Reiche-Kuhn sum rule. For the first time, the decay pattern of low-lying strength in a neutron-rich nucleus is measured. The extracted decay pattern is not consistent with several mean-field theory descriptions of the pygmy states.

  17. Spiral crack patterns observed for melt-grown spherulites of poly(L-lactic acid) upon quenching.

    PubMed

    Matsuda, Futoshi; Sobajima, Takamasa; Irie, Satoshi; Sasaki, Takashi

    2016-04-01

    In this paper, we demonstrate the characteristic spiral cracking that appears on the surface of melt-grown poly(L-lactic acid) (PLLA) spherulites with relatively large sizes (greater than 0.4mm in diameter). The crack occurs via thermal shrinkage upon quenching after crystallization. Although concentric cracks on polymer spherulites have been found to occur in quite a few studies, spiral crack patterns have never been reported so far. The present spiral crack was observed for thick spherulites (> 10 μm), whereas the concentric crack pattern was frequently observed for thin spherulites (typically 5 μm). The present PLLA spherulites exhibited a non-banded structure with no apparent structural periodicity at least on the scale of the spiral pitch, and thus no direct correlation between the crack pattern and the spherulitic structure was suggested. The spiral was revealed to be largely Archimedean of which the spiral pitch increases with an increase in the thickness of the spherulite. This may be interpreted in terms of a classical mechanical model for a thin layer with no delamination from the substrate.

  18. Socio-demographic and lifestyle determinants of dietary patterns in French-speaking Switzerland, 2009-2012.

    PubMed

    Marques-Vidal, Pedro; Waeber, Gérard; Vollenweider, Peter; Guessous, Idris

    2018-01-12

    Food intake is a complex behaviour which can be assessed using dietary patterns. Our aim was to characterize dietary patterns and associated factors in French-speaking Switzerland. Cross-sectional study conducted between 2009 and 2012 in the city of Lausanne, Switzerland, including 4372 participants (54% women, 57.3 ± 10.3 years). Food consumption was assessed using a validated food frequency questionnaire. Dietary patterns were assessed by principal components analysis. Three patterns were identified: "Meat & fries"; "Fruits & Vegetables" and "Fatty & sugary". The "Meat & fries" pattern showed the strongest correlations with total and animal protein and cholesterol carbohydrates, dietary fibre and calcium. The "Fruits & Vegetables" pattern showed the strongest correlations with dietary fibre, carotene and vitamin D. The "Fatty & sugary" pattern showed the strongest correlations with total energy and saturated fat. On multivariate analysis, male gender, low educational level and sedentary status were positively associated with the "Meat & fries" and the "Fatty & sugary" patterns, and negatively associated with the "Fruits & Vegetables" pattern. Increasing age was inversely associated with the "Meat & fries" pattern; smoking status was inversely associated with the "Fruits & Vegetables" pattern. Being born in Portugal or Spain was positively associated with the "Meat & fries" and the "Fruits & Vegetables" patterns. Increasing body mass index was positively associated with the "Meat & fries" pattern and inversely associated with the "Fatty & sugary" pattern. Three dietary patterns, one healthy and two unhealthy, were identified in the Swiss population. Several associated modifiable behaviours were identified; the information on socio- demographic determinants allows targeting of the most vulnerable groups in the context of public health interventions.

  19. SPATIALLY AND SPECTRALLY RESOLVED OBSERVATIONS OF A ZEBRA PATTERN IN A SOLAR DECIMETRIC RADIO BURST

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chen Bin; Bastian, T. S.; Gary, D. E.

    2011-07-20

    We present the first interferometric observation of a zebra-pattern radio burst with simultaneous high spectral ({approx}1 MHz) and high time (20 ms) resolution. The Frequency-Agile Solar Radiotelescope Subsystem Testbed (FST) and the Owens Valley Solar Array (OVSA) were used in parallel to observe the X1.5 flare on 2006 December 14. By using OVSA to calibrate the FST, the source position of the zebra pattern can be located on the solar disk. With the help of multi-wavelength observations and a nonlinear force-free field extrapolation, the zebra source is explored in relation to the magnetic field configuration. New constraints are placed onmore » the source size and position as a function of frequency and time. We conclude that the zebra burst is consistent with a double-plasma resonance model in which the radio emission occurs in resonance layers where the upper-hybrid frequency is harmonically related to the electron cyclotron frequency in a coronal magnetic loop.« less

  20. Inter-rater reliability for movement pattern analysis (MPA): measuring patterning of behaviors versus discrete behavior counts as indicators of decision-making style

    PubMed Central

    Connors, Brenda L.; Rende, Richard; Colton, Timothy J.

    2014-01-01

    The unique yield of collecting observational data on human movement has received increasing attention in a number of domains, including the study of decision-making style. As such, interest has grown in the nuances of core methodological issues, including the best ways of assessing inter-rater reliability. In this paper we focus on one key topic – the distinction between establishing reliability for the patterning of behaviors as opposed to the computation of raw counts – and suggest that reliability for each be compared empirically rather than determined a priori. We illustrate by assessing inter-rater reliability for key outcome measures derived from movement pattern analysis (MPA), an observational methodology that records body movements as indicators of decision-making style with demonstrated predictive validity. While reliability ranged from moderate to good for raw counts of behaviors reflecting each of two Overall Factors generated within MPA (Assertion and Perspective), inter-rater reliability for patterning (proportional indicators of each factor) was significantly higher and excellent (ICC = 0.89). Furthermore, patterning, as compared to raw counts, provided better prediction of observable decision-making process assessed in the laboratory. These analyses support the utility of using an empirical approach to inform the consideration of measuring patterning versus discrete behavioral counts of behaviors when determining inter-rater reliability of observable behavior. They also speak to the substantial reliability that may be achieved via application of theoretically grounded observational systems such as MPA that reveal thinking and action motivations via visible movement patterns. PMID:24999336

  1. Solar energy microclimate as determined from satellite observations

    NASA Technical Reports Server (NTRS)

    Vonder Haar, T. H.; Ellis, J. S.

    1975-01-01

    A method is presented for determining solar insolation at the earth's surface using satellite broadband visible radiance and cloud imagery data, along with conventional in situ measurements. Conventional measurements are used to both tune satellite measurements and to develop empirical relationships between satellite observations and surface solar insolation. Cloudiness is the primary modulator of sunshine. The satellite measurements as applied in this method consider cloudiness both explicitly and implicitly in determining surface solar insolation at space scales smaller than the conventional pyranometer network.

  2. Determination of the biometric characteristics of palatine rugae patterns in Uttar Pradesh population: a cross-sectional study.

    PubMed

    Sekhon, Harjeet Kaur; Sircar, Keya; Singh, Sanjeet; Jawa, Deepti; Sharma, Priyanka

    2014-01-01

    Identification is the establishment of identity of an individual. The basis of dental identification is based on the observation that no two individuals can have same dentition. Palatal rugae are irregular, asymmetric ridges of the mucous membrane extending laterally from the incisive papilla and the anterior part of the palatal raphe. The location of palatal rugae inside the oral cavity confers them with stability even when exposed to high temperatures or trauma. Their resistance to trauma and their apparent unique appearance has suggested their use as a tool for forensic identification. To record the biometric characteristics of shape, size, direction, number and position of palatal rugae and analyze whether palatal rugoscopy can be used as a tool for personal identification and for sex determination. A cross-sectional study. The sample consisted of 100 subjects (50 males, 50 females) between 18 and 25 years. Maxillary impressions were made with elastomeric impression material and dental stone was used to make models. The palatal rugae patterns were traced and analyzed with a magnifying hand lens. The biometric characteristics of number, size, shape, and direction were analyzed using Thomaz and Kotz classification (1983). The casts were coded to blind the examiners about the identity of the subjects. Unpaired t-test and one-way ANOVA using SPSS 19.0 statistical program for Windows. The average number of rugae was slightly more in females. Wavy (44.9%) and curved (41.8%) shapes were more prevalent. Maximum number of rugae was found in E quadrant (40.73%). The average size was 9.221 mm. Most rugae were forwardly directed in both groups. This study concluded that rugae pattern are highly individualistic and can be used as a supplementary method for personal identification and sex determination. Further inter-observer and intra-observer variability were not found to be significant, which further validates the use of rugoscopy as a forensic tool.

  3. Cell Pattern in the Arabidopsis Root Epidermis Determined by Lateral Inhibition with Feedback

    PubMed Central

    Lee, Myeong Min; Schiefelbein, John

    2002-01-01

    In the root epidermis of Arabidopsis, hair and nonhair cell types are specified in a distinct position-dependent pattern. Here, we show that transcriptional feedback loops between the WEREWOLF (WER), CAPRICE (CPC), and GLABRA2 (GL2) genes help to establish this pattern. Positional cues bias the expression of the WER MYB gene, leading to the induction of CPC and GL2 in cells located in a particular position (N) and adoption of the nonhair fate. The truncated MYB encoded by CPC mediates a lateral inhibition mechanism to negatively regulate WER, GL2, and its own gene in the alternative position (H) to induce the hair fate. These results provide a molecular genetic framework for understanding the determination of a cell-type pattern in plants. PMID:11910008

  4. Cell pattern in the Arabidopsis root epidermis determined by lateral inhibition with feedback.

    PubMed

    Lee, Myeong Min; Schiefelbein, John

    2002-03-01

    In the root epidermis of Arabidopsis, hair and nonhair cell types are specified in a distinct position-dependent pattern. Here, we show that transcriptional feedback loops between the WEREWOLF (WER), CAPRICE (CPC), and GLABRA2 (GL2) genes help to establish this pattern. Positional cues bias the expression of the WER MYB gene, leading to the induction of CPC and GL2 in cells located in a particular position (N) and adoption of the nonhair fate. The truncated MYB encoded by CPC mediates a lateral inhibition mechanism to negatively regulate WER, GL2, and its own gene in the alternative position (H) to induce the hair fate. These results provide a molecular genetic framework for understanding the determination of a cell-type pattern in plants.

  5. Earth orientation determinations by short duration VLBI observations

    NASA Astrophysics Data System (ADS)

    Nothnagel, Axel; Zhihan, Qian; Nicolson, George D.; Tomasi, Paolo

    1994-03-01

    In May 1989 and April 1990 the radio telescopes of the Wettzell Geodetic Fundamental Station in Germany and of the Shanghai Observatory near Seshan in China observed two series of daily VLBI experiments of short duration for precise determination of UT1. In 1990 a few experiments were complemented by the Hartebeesthoek Radio Astronomy Observatory in South Africa and the Medicina telescope of the Bologna Istituto di Radioastronomia in Italy. Employing the South African station together with the east-west baseline formed by the observatories of Seshan and Medicina permitted simultaneous determinations of UT1 and polar motion. Here we report on the results of these observations. Comparing the UT1 results with those of the IRIS Intensive series gives a clear indication of the absolute accuracy of such short duration VLBI measurements which is estimated to be of the order of ±60 µs.

  6. Quantization and symmetry in periodic coverage patterns with applications to earth observation. [for satellite ground tracks

    NASA Technical Reports Server (NTRS)

    King, J. C.

    1975-01-01

    The general orbit-coverage problem in a simplified physical model is investigated by application of numerical approaches derived from basic number theory. A system of basic and general properties is defined by which idealized periodic coverage patterns may be characterized, classified, and delineated. The principal common features of these coverage patterns are their longitudinal quantization, determined by the revolution number R, and their overall symmetry.

  7. Seasonal patterns of oral antihistamine and intranasal corticosteroid purchases from Australian community pharmacies: a retrospective observational study.

    PubMed

    Carney, A Simon; Price, David B; Smith, Pete K; Harvey, Richard; Kritikos, Vicky; Bosnic-Anticevich, Sinthia Z; Christian, Louise; Skinner, Derek A; Carter, Victoria; Durieux, Alice Ms

    2017-01-01

    To explore patterns in the purchase of prescription and over-the-counter (OTC) oral antihistamines (OAHs) and intranasal corticosteroids (INCSs) by patients, from pharmacies in different geographical regions of Australia. Retrospective observational study using a database containing anonymous pharmacy transaction data from 20.0% of the pharmacies in Australia that link doctor prescriptions and OTC information. Pharmacy purchases of at least one prescription or OTC rhinitis treatment during 2013 and 2014 were assessed. In total, 4,247,193 prescription and OTC rhinitis treatments were purchased from 909 pharmacies over 12 months. Of treatments purchased, 75.9% were OAHs and 16.6% were INCSs. OTC purchases of both treatments exceeded purchases through prescription. OTC OAHs purchasing patterns were seasonal and almost identical in the Australian Capital Territory, Victoria, Western Australia, South Australia, and New South Wales, and similar seasonal patterns for OTC INCSs were noted in most regions except for South Australia and Tasmania. Prescription purchasing patterns of both OAHs and INCSs remained unchanged throughout the year in most regions. This large-scale retrospective observational study identified seasonal purchasing patterns of OTC and prescription OAHs and INCSs in a real-world setting. It highlighted that seasonality only affects OTC purchasing patterns of OAHs and INCSs across Australia and that practitioner prescribing remains unchanged, suggesting that it is only for persistent disease.

  8. Seasonal patterns of oral antihistamine and intranasal corticosteroid purchases from Australian community pharmacies: a retrospective observational study

    PubMed Central

    Carney, A Simon; Price, David B; Smith, Pete K; Harvey, Richard; Kritikos, Vicky; Bosnic-Anticevich, Sinthia Z; Christian, Louise; Skinner, Derek A; Carter, Victoria; Durieux, Alice MS

    2017-01-01

    Purpose To explore patterns in the purchase of prescription and over-the-counter (OTC) oral antihistamines (OAHs) and intranasal corticosteroids (INCSs) by patients, from pharmacies in different geographical regions of Australia. Patients and methods Retrospective observational study using a database containing anonymous pharmacy transaction data from 20.0% of the pharmacies in Australia that link doctor prescriptions and OTC information. Pharmacy purchases of at least one prescription or OTC rhinitis treatment during 2013 and 2014 were assessed. Results In total, 4,247,193 prescription and OTC rhinitis treatments were purchased from 909 pharmacies over 12 months. Of treatments purchased, 75.9% were OAHs and 16.6% were INCSs. OTC purchases of both treatments exceeded purchases through prescription. OTC OAHs purchasing patterns were seasonal and almost identical in the Australian Capital Territory, Victoria, Western Australia, South Australia, and New South Wales, and similar seasonal patterns for OTC INCSs were noted in most regions except for South Australia and Tasmania. Prescription purchasing patterns of both OAHs and INCSs remained unchanged throughout the year in most regions. Conclusion This large-scale retrospective observational study identified seasonal purchasing patterns of OTC and prescription OAHs and INCSs in a real-world setting. It highlighted that seasonality only affects OTC purchasing patterns of OAHs and INCSs across Australia and that practitioner prescribing remains unchanged, suggesting that it is only for persistent disease. PMID:28919832

  9. Classification of atrophic mucosal patterns on Blue LASER Imaging for endoscopic diagnosis of Helicobacter pylori-related gastritis: A retrospective, observational study.

    PubMed

    Nishikawa, Yoshiyuki; Ikeda, Yoshio; Murakami, Hidehiro; Hori, Shin-Ichiro; Hino, Kaori; Sasaki, Chise; Nishikawa, Megumi

    2018-01-01

    Atrophic gastritis can be classified according to characteristic mucosal patterns observed by Blue LASER Imaging (BLI) in a medium-range to distant view. To facilitate the endoscopic diagnosis of Helicobacter pylori (HP)-related gastritis, we investigated whether atrophic mucosal patterns correlated with HP infection based on the image interpretations of three endoscopists blinded to clinical features. This study included 441 patients diagnosed as having atrophic gastritis by upper gastrointestinal endoscopy at Nishikawa Gastrointestinal Clinic between April 1, 2015 and March 31, 2016. The presence/absence of HP infection was not taken into consideration. Endoscopy was performed using a Fujifilm EG-L580NW scope. Atrophic mucosal patterns observed by BLI were classified into Spotty, Cracked and Mottled. Image interpretation results were that 89, 122 and 228 patients had the Spotty, Cracked and Mottled patterns, respectively, and 2 patients an undetermined pattern. Further analyses were performed on 439 patients, excluding the 2 with undetermined patterns. The numbers of patients testing negative/positive for HP infection in the Spotty, Cracked and Mottled pattern groups were 12/77, 105/17, and 138/90, respectively. The specificity, positive predictive value and positive likelihood ratio for endoscopic diagnosis with positive HP infection based on the Spotty pattern were 95.3%, 86.5% and 8.9, respectively. In all patients with the Spotty pattern before HP eradication, the Cracked pattern was observed on subsequent post-eradication endoscopy. The Spotty pattern may represent the presence of HP infection, the Cracked pattern, a post-inflammatory change as seen after HP eradication, and the Mottled pattern, intestinal metaplasia.

  10. Determination of the Association Between T2-weighted MRI and Gleason Sub-pattern: A Proof of Principle Study.

    PubMed

    Downes, Michelle R; Gibson, Eli; Sykes, Jenna; Haider, Masoom; van der Kwast, Theo H; Ward, Aaron

    2016-11-01

    The study aimed to determine the relationship between T2-weighted magnetic resonance imaging (MRI) signal and histologic sub-patterns in prostate cancer areas with different Gleason grades. MR images of prostates (n = 25) were obtained prior to radical prostatectomy. These were processed as whole-mount specimens with tumors and the peripheral zone was annotated digitally by two pathologists. Gleason grade 3 was the most prevalent grade and was subdivided into packed, intermediate, and sparse based on gland-to-stroma ratio. Large cribriform, intraductal carcinoma, and small cribriform glands (grade 4 group) were separately annotated but grouped together for statistical analysis. The log MRI signal intensity for each contoured region (n = 809) was measured, and pairwise comparisons were performed using the open-source software R version 3.0.1. Packed grade 3 sub-pattern has a significantly lower MRI intensity than the grade 4 group (P < 0.00001). Sparse grade 3 has a significantly higher MRI intensity than the packed grade 3 sub-pattern (P < 0.0001). No significant difference in MRI intensity was observed between the Gleason grade 4 group and the sparse sub-pattern grade 3 group (P = 0.54). In multivariable analysis adjusting for peripheral zone, the P values maintained significance (packed grade 3 group vs grade 4 group, P < 0.001; and sparse grade 3 sub-pattern vs packed grade 3 sub-pattern, P < 0.001). This study demonstrated that T2-weighted MRI signal is dependent on histologic sub-patterns within Gleason grades 3 and 4 cancers, which may have implications for directed biopsy sampling and patient management. Copyright © 2016 The Association of University Radiologists. Published by Elsevier Inc. All rights reserved.

  11. Spatial extent of analysis influences observed patterns of population genetic structure in a widespread darter species (Percidae)

    USGS Publications Warehouse

    Argentina, Jane E.; Angermeier, Paul L.; Hallerman, Eric M.; Welsh, Stuart A.

    2018-01-01

    Connectivity among stream fish populations allows for exchange of genetic material and helps maintain genetic diversity, adaptive potential and population stability over time. Changes in species demographics and population connectivity have the potential to permanently alter the genetic patterns of stream fish, although these changes through space and time are variable and understudied in small‐bodied freshwater fish.As a spatially widespread, common species of benthic freshwater fish, the variegate darter (Etheostoma variatum) is a model species for documenting how patterns of genetic structure and diversity respond to increasing isolation due to large dams and how scale of study may shape our understanding of these patterns. We sampled variegate darters from 34 sites across their range in the North American Ohio River basin and examined how patterns of genetic structure and diversity within and between populations responded to historical population changes and dams within and between populations.Spatial scale and configuration of genetic structure varied across the eight identified populations, from tributaries within a watershed, to a single watershed, to multiple watersheds that encompass Ohio River mainstem habitats. This multiwatershed pattern of population structuring suggests genetic dispersal across large distances was and may continue to be common, although some populations remain isolated despite no apparent structural dispersal barriers. Populations with low effective population sizes and evidence of past population bottlenecks showed low allelic richness, but diversity patterns were not related to watershed size, a surrogate for habitat availability. Pairwise genetic differentiation (FST) increased with fluvial distance and was related to both historic and contemporary processes. Genetic diversity changes were influenced by underlying population size and stability, and while instream barriers were not strong determinants of genetic structuring or

  12. Xylobios: patterns, roles and determinants of saproxylic diversity in Belgian deciduous forests

    Treesearch

    Philippe Fayt; Etienne Branquart; Marc Dufrene; Jean-Marc Henin; Christophe Pontegnie; Veerle Versteirt

    2003-01-01

    The XYLOBIOS project aims to study patterns, roles and determinants of saproxylic diversity (i.e., species richness and abundance of organisms which are dependent upon the dead or dying wood of moribund or dead trees, or upon the presence of other saproxylics) found in Belgian beech Fagus sylvatica and oak Quercus spp. forests. The...

  13. Vasculitis: determinants of disease patterns.

    PubMed

    Hoffman, Gary S; Calabrese, Leonard H

    2014-08-01

    The vasculitides are a large group of heterogeneous diseases for which it has been assumed that pathogenesis is largely autoimmune. As clinicians, we distinguish one form of vasculitis from another on the basis of observed patterns of organ injury, the size of the vessels affected and histopathological findings. The terms 'small-vessel', 'medium-vessel' and 'large-vessel' vasculitis are useful clinical descriptors, but fail to inform us about why vessels of a certain calibre are favoured by one disease and not another. Classification based on vessel size also fails to consider that vessels of a specific calibre are not equally prone to injury. Distinct vulnerabilities undoubtedly relate to the fact that same-size vessels in different tissues may not be identical conduits. In fact, vessels become specialized, from the earliest stages of embryonic development, to suit the needs of different anatomical locations. Vessels of the same calibre in different locations and organs are as different as the organ parenchymal cells through which they travel. The dialogue between developing vessels and the tissues they perfuse is designed to meet special local needs. Added to the story of vascular diversity and vulnerability are changes that occur during growth, development and ageing. An improved understanding of the unique territorial vulnerabilities of vessels could form the basis of new hypotheses for the aetiopathogenesis of the vasculitides. This Review considers how certain antigens, including infectious agents, might become disease-relevant and how vascular diversity could influence disease phenotypes and the spectrum of vascular inflammatory diseases.

  14. Observations on quality senior health business: success patterns and policy implications.

    PubMed

    Yang, Ya-Ting; Hsu, Yi-Hsin Elsa; Chen, Ya-Mei; Su, Shyi; Chang, Yao-Mao; Iqbal, Usman; Yujiro, Handa; Lin, Neng-Pai

    2016-04-01

    Population ageing is a global issue that affects almost every country. Most ageing researches focused on demand side and studies related to supply side were relatively scarce. This study selected quality enterprises focus on ageing health and analysed their patterns on providing quality services successfully. Our study selected quality senior health enterprises and explored their success patterns through face-to-face semi-structured in-depth interviews with CEO of each enterprise in 2013. Thirty-three quality senior health enterprises in Taiwan. Thirty-three CEO's of enterprises were interviewed individually. None. Core values and vision, historical development, organization structure, services/products provided, delivering channels, customer relationships and further development strategies. Our results indicated success patterns for senior enterprises that there were meeting diversified lifestyles and substitutive needs for the elderly and their caregivers, providing a total solution for actual/virtual integration and flexible one-stop shopping services. We classified these enterprises by used degree of clicks-and-mortar of services and residing situation of the elderly. Industry characteristics and policy implications were summarized. Our observations will serve as a primary evidenced base for enterprises developing their senior market, and also for opening dialogue between customers and enterprises to facilitate valuable opportunities for co-creation between the supply and demand sides. © The Author 2016. Published by Oxford University Press in association with the International Society for Quality in Health Care; all rights reserved.

  15. Striped aeolian bedforms: a novel longitudinal pattern observed in ripples and megaripples on Earth and Mars

    NASA Astrophysics Data System (ADS)

    Gough, T. R.; Hugenholtz, C.; Barchyn, T.; Martin, R. L.

    2017-12-01

    Striped aeolian bedforms (SABs) are a previously undocumented longitudinal pattern consisting of streamwise corridors of ripples or megaripples separated by corridors containing smaller bedforms. Similar patterns of spanwise variations in bed texture and/or bed topography are observed in water flumes. SABs have been observed in satellite imagery at sites in Peru, Iran, California, the Puna region of northwestern Argentina, and on Mars. The spanwise periodicity varies from <1-3 m at a coastal site in California up to 15 m for gravel-mantled megaripples in Argentina. To understand formative mechanisms, we performed field measurements of surface sediment texture at these sites. Using both manual and automated image-based grain size analysis, we found that median grain size was larger on the ripples and megaripples than on the intervening corridors containing smaller bedforms. This result is consistent with fluvial stripes, for which it is suggested that instability-driven streamwise vortices produce lateral sediment transport and sorting. We found no consistent evidence upwind of the SAB patterns to indicate topographic seeding is necessary. Therefore, we hypothesize that SABs are a self-organized bedform pattern that develops from secondary (lateral) transport of sediment in mixed sediment deposits. We also hypothesize that the development and maintenance of SABs requires unimodal wind regimes.

  16. Molecular patterns of sex determination in the animal kingdom: a comparative study of the biology of reproduction

    PubMed Central

    Manolakou, Panagiota; Lavranos, Giagkos; Angelopoulou, Roxani

    2006-01-01

    Determining sexual fate is an integral part of reproduction, used as a means to enrich the genome. A variety of such regulatory mechanisms have been described so far and some of the more extensively studied ones are being discussed. For the insect order of Hymenoptera, the choice lies between uniparental haploid males and biparental diploid females, originating from unfertilized and fertilized eggs accordingly. This mechanism is also known as single-locus complementary sex determination (slCSD). On the other hand, for Dipterans and Drosophila melanogaster, sex is determined by the ratio of X chromosomes to autosomes and the sex switching gene, sxl. Another model organism whose sex depends on the X:A ratio, Caenorhabditis elegans, has furthermore to provide for the brief period of spermatogenesis in hermaphrodites (XX) without the benefit of the "male" genes of the sex determination pathway. Many reptiles have no discernible sex determining genes. Their sexual fate is determined by the temperature of the environment during the thermosensitive period (TSP) of incubation, which regulates aromatase activity. Variable patterns of sex determination apply in fish and amphibians. In birds, while sex chromosomes do exist, females are the heterogametic (ZW) and males the homogametic sex (ZZ). However, we have yet to decipher which of the two (Z or W) is responsible for the choice between males and females. In mammals, sex determination is based on the presence of two identical (XX) or distinct (XY) gonosomes. This is believed to be the result of a lengthy evolutionary process, emerging from a common ancestral autosomal pair. Indeed, X and Y present different levels of homology in various mammals, supporting the argument of a gradual structural differentiation starting around the SRY region. The latter initiates a gene cascade that results in the formation of a male. Regulation of sex steroid production is also a major result of these genetic interactions. Similar

  17. Performance comparison of attitude determination, attitude estimation, and nonlinear observers algorithms

    NASA Astrophysics Data System (ADS)

    MOHAMMED, M. A. SI; BOUSSADIA, H.; BELLAR, A.; ADNANE, A.

    2017-01-01

    This paper presents a brief synthesis and useful performance analysis of different attitude filtering algorithms (attitude determination algorithms, attitude estimation algorithms, and nonlinear observers) applied to Low Earth Orbit Satellite in terms of accuracy, convergence time, amount of memory, and computation time. This latter is calculated in two ways, using a personal computer and also using On-board computer 750 (OBC 750) that is being used in many SSTL Earth observation missions. The use of this comparative study could be an aided design tool to the designer to choose from an attitude determination or attitude estimation or attitude observer algorithms. The simulation results clearly indicate that the nonlinear Observer is the more logical choice.

  18. Kin-Aggregations Explain Chaotic Genetic Patchiness, a Commonly Observed Genetic Pattern, in a Marine Fish.

    PubMed

    Selwyn, Jason D; Hogan, J Derek; Downey-Wall, Alan M; Gurski, Lauren M; Portnoy, David S; Heath, Daniel D

    2016-01-01

    The phenomenon of chaotic genetic patchiness is a pattern commonly seen in marine organisms, particularly those with demersal adults and pelagic larvae. This pattern is usually associated with sweepstakes recruitment and variable reproductive success. Here we investigate the biological underpinnings of this pattern in a species of marine goby Coryphopterus personatus. We find that populations of this species show tell-tale signs of chaotic genetic patchiness including: small, but significant, differences in genetic structure over short distances; a non-equilibrium or "chaotic" pattern of differentiation among locations in space; and within locus, within population deviations from the expectations of Hardy-Weinberg equilibrium (HWE). We show that despite having a pelagic larval stage, and a wide distribution across Caribbean coral reefs, this species forms groups of highly related individuals at small spatial scales (<10 metres). These spatially clustered family groups cause the observed deviations from HWE and local population differentiation, a finding that is rarely demonstrated, but could be more common than previously thought.

  19. Task 1, Fractal characteristics of drainage patterns observed in the Appalachian Valley and Ridge and Plateau provinces

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Wilson, T.; Dominic, J.; Halverson, J.

    1996-04-10

    Drainage patterns observed in the Appalachian Valley and Ridge and Plateau provinces exhibit distinctly different patterns. The patterns appear to be controlled by varying influences of local structural and lithologic variability. Drainage patterns in the Valley and Ridge study area can be classified as a combination of dendritic and trellis arrangements. The patterns vary over short distances in both the strike and dip directions. In the Granny Creek area of the Appalachian Plateau drainage patterns are predominantly dendritic. The possibility that these drainage patterns have fractal characteristics was evaluated by box-counting. Results obtained from box counting do not yield amore » well defined fractal regime in either areas. In the Valley and Ridge a space-filling, or random regime (D=2) is observed for boxes with side-lengths of 300 meters and greater. Below 300 meters, large changes in D occur between consecutively smaller box sizes. From side lengths of 300 to 150m, 150 to 75m, and 75 to 38m, D is measured at 1.77, 1.39, and 1.08 respectively. For box sizes less than 38m the fractal dimension is 1 or less. While the l0g-log response of the box counting data is nonlinear and does not define a fractal regime, the curves offer the possibility of characterizing non-fractal patterns. The rate at which D drops outside the random regime correlates to drainage density. D in areas with a smaller density of drainage segments fell toward saturation (D=1) more abruptly. The break-away point from the random regime and the transition to the saturated regime may provide useful information about the relative lengths of stream segments.« less

  20. 75 FR 81201 - 2011 Annual Determination for Sea Turtle Observer Requirement

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-27

    ...-XA016 2011 Annual Determination for Sea Turtle Observer Requirement AGENCY: National Marine Fisheries... observers upon NMFS' request. The purpose of observing identified fisheries is to learn more about sea turtle interactions in a given fishery, evaluate existing measures to prevent or reduce prohibited sea...

  1. PATTERNS OF FLOWS IN AN INTERMEDIATE PROMINENCE OBSERVED BY HINODE

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ahn, Kwangsu; Chae, Jongchul; Cao Wenda

    2010-09-20

    The investigation of plasma flows in filaments/prominences gives us clues to understanding their magnetic structures. We studied the patterns of flows in an intermediate prominence observed by Hinode/SOT. By examining a time series of H{alpha} images and Ca II H images, we have found horizontal flows in the spine and vertical flows in the barb. Both of these flows have a characteristic speed of 10-20 km s{sup -1}. The horizontal flows displayed counterstreaming. Our detailed investigation revealed that most of the moving fragments in fact reversed direction at the end point of the spine near a footpoint close to themore » associated active region. These returning flows may be one possible explanation of the well-known counterstreaming flows in prominences. In contrast, we have found vertical flows-downward and upward-in the barb. Most of the horizontal flows in the spine seem to switch into vertical flows when they approach the barb, and vice versa. We propose that the net force resulting from a small deviation from magnetohydrostatic equilibrium, where magnetic fields are predominantly horizontal, may drive these patterns of flow. In the prominence studied here, the supposed magnetohydrostatic configuration is characterized by magnetic field lines sagging with angles of 13{sup 0} and 39{sup 0} in the spine and the barb, respectively.« less

  2. Star Pattern Recognition and Spacecraft Attitude Determination.

    DTIC Science & Technology

    1981-05-01

    direction; that is, Qf(Lx Ly L qva ) (A5 .2) If we let IS be the velocity of starlight in the inertial frame and 1 v be observer velocity, then the...Virginia 24061 DTIC Am = 1 .rECT E SEP 2 1981 "&AY 1981 APPOVED FOR MPW UDUCR Dgn"IUflON IJUND U.S. ARMY CORPS OF ENGINEERS ENGINEER TOPOGRAPHIC LABORATORIESI...NO. 3. RECIPIENT’S CATALOG NUMBER -/ 03 1 026g441,9sfog 5TARIATTERN ,ECOGNITION AND SPACECRAT EO ,iCV ATTITUDE DETERMINATION, -L Contract e .t 6

  3. Breathing pattern and breathlessness in idiopathic pulmonary fibrosis: An observational study.

    PubMed

    Olukogbon, Kasope L; Thomas, Paul; Colasanti, Ricardo; Hope-Gill, Ben; Williams, Edgar Mark

    2016-02-01

    Idiopathic pulmonary fibrosis (IPF) is characterized by progressive decline in lung function and increasing dyspnoea. The aim of this study was to investigate the relationship among IPF, pulmonary function, resting tidal breathing patterns and level of breathlessness. Thirty-one participants with IPF and 17 matched healthy controls underwent lung function testing, followed by a 2-min period of resting tidal breathing. The IPF cohort was stratified according to disease severity, based on their forced vital capacity and diffusion capacity for carbon monoxide. In comparison to the healthy controls, the IPF cohort showed a higher tidal volume, VT , of 0.22 L (P = 0.026) and a raised minute ventilation in the severest IPF group, while no differences in the timing of inspiration or expiration were observed. In the IPF cohort, the ratio of VT to forced vital capacity was around 15% higher. These changes corresponded with an increase in the self-reported sensation of breathlessness. Those with IPF increased their depth of breathing with worsening disease severity, with IPF-induced changes in pulmonary function and breathlessness associated with an altered tidal breathing pattern. © 2015 Asian Pacific Society of Respirology.

  4. Co-infections determine patterns of mortality in a population exposed to parasite infection.

    PubMed

    Woolhouse, Mark E J; Thumbi, Samuel M; Jennings, Amy; Chase-Topping, Margo; Callaby, Rebecca; Kiara, Henry; Oosthuizen, Marinda C; Mbole-Kariuki, Mary N; Conradie, Ilana; Handel, Ian G; Poole, E Jane; Njiiri, Evalyne; Collins, Nicola E; Murray, Gemma; Tapio, Miika; Auguet, Olga Tosas; Weir, Willie; Morrison, W Ivan; Kruuk, Loeske E B; Bronsvoort, B Mark de C; Hanotte, Olivier; Coetzer, Koos; Toye, Philip G

    2015-03-01

    Many individual hosts are infected with multiple parasite species, and this may increase or decrease the pathogenicity of the infections. This phenomenon is termed heterologous reactivity and is potentially an important determinant of both patterns of morbidity and mortality and of the impact of disease control measures at the population level. Using infections with Theileria parva (a tick-borne protozoan, related to Plasmodium) in indigenous African cattle [where it causes East Coast fever (ECF)] as a model system, we obtain the first quantitative estimate of the effects of heterologous reactivity for any parasitic disease. In individual calves, concurrent co-infection with less pathogenic species of Theileria resulted in an 89% reduction in mortality associated with T. parva infection. Across our study population, this corresponds to a net reduction in mortality due to ECF of greater than 40%. Using a mathematical model, we demonstrate that this degree of heterologous protection provides a unifying explanation for apparently disparate epidemiological patterns: variable disease-induced mortality rates, age-mortality profiles, weak correlations between the incidence of infection and disease (known as endemic stability), and poor efficacy of interventions that reduce exposure to multiple parasite species. These findings can be generalized to many other infectious diseases, including human malaria, and illustrate how co-infections can play a key role in determining population-level patterns of morbidity and mortality due to parasite infections.

  5. SPATIAL PATTERNS AND ECOLOGICAL DETERMINANTS OF BENTHIC ALGAL ASSEMBLAGES IN MID-ATLANTIC STREAMS, USA

    EPA Science Inventory

    We attempted to identify spatial patterns and determinants for benthic algal assemblages in Mid-Atlantic streams. Periphyton, water chemistry, stream physical habitat, riparian conditions, and land cover/use in watersheds were characterized at 89 randomly selected stream sites i...

  6. Real-time observation of X-ray diffraction patterns with the Lixiscope

    NASA Technical Reports Server (NTRS)

    Chung, D. Y.; Tsang, T.; Yin, L. I.; Anderson, J. R.

    1981-01-01

    The feasibility of the Lixiscope (Low Intensity X-ray Imaging Scope) is demonstrated for real-time observation of transmission Laue patterns. Making use of the high-gain capability of microchannel plate (MCP) visible-light image intensifier tubes, X-ray images are converted to visible-light images by a scintillator. Pb discs are taped to the center of the Lixiscope input face, and crystal samples are held on a goniometer stage with modeling clay. With a compact size to facilitate off axis viewing, and real-time viewing to allow instantaneous response, the Lixiscope may prove useful in dynamic studies of the effects of plastic flows, stresses, high pressures, and low temperatures.

  7. Prescribing Patterns of Drugs in Acute Respiratory Distress Syndrome (ARDS): An Observational Study

    PubMed Central

    Rao, Shobitha; Chogtu, Bharti

    2015-01-01

    Introduction: Acute respiratory distress syndrome (ARDS) is characterized by acute respiratory failure and is associated with wide range of clinical disorders. Controversy prevails over the pharmacological intervention in this disease. The aim of the study was to observe the prescribing pattern of drugs in patients with ARDS managed at a tertiary care hospital. Materials and Methods: This observational study was conducted at tertiary care hospital in India. Data of patients admitted from January 2010 to December 2012 was collected. Patients aged more than 18 years admitted in ICU, who were diagnosed to have ARDS during the study period, were included. A total of 150 patients of ARDS were selected. Data was collected as per the pre designed proforma and it included patients’ age, gender, clinical disorders precipitating ARDS, prescribing pattern of drugs and outcome. The data of the subjects was collected till discharge from hospital or death. Results: Infection was the cause of ARDS in 81.3% (n=122) of subjects. Antibiotics were prescribed in all the subjects and beta-lactams were prescribed in 97.3% (n=146). 41.3% (n=62) were prescribed corticosteroids, 39.3% (n=59) diuretics and 89.3% (n=134) intravenous fluids. Conclusion: The outcome of patients on different pharmacological treatment did not show any statistically significant difference. PMID:25859465

  8. Dietary patterns and risk of colorectal adenoma: a systematic review and meta-analysis of observational studies.

    PubMed

    Godos, J; Bella, F; Torrisi, A; Sciacca, S; Galvano, F; Grosso, G

    2016-12-01

    Current evidence suggests that dietary patterns may play an important role in colorectal cancer risk. The present study aimed to perform a systematic review and meta-analysis of observational studies exploring the association between dietary patterns and colorectal adenomas (a precancerous condition). Pubmed and EMBASE electronic databases were systematically searched to retrieve eligible studies. Only studies exploring the risk or association with colorectal adenomas for the highest versus lowest category of exposure to a posteriori dietary patterns were included in the quantitative analysis. Random-effects models were applied to calculate relative risks (RRs) of colorectal adenomas for high adherence to healthy or unhealthy dietary patterns. Statistical heterogeneity and publication bias were explored. Twelve studies were reviewed. Three studies explored a priori dietary patterns using scores identifying adherence to the Mediterranean, Paleolithic and Dietary Approaches to Stop Hypertension (DASH) diet and reported an association with decreased colorectal adenoma risk. Two studies tested the association with colorectal adenomas between a posteriori dietary patterns showing lower odds of disease related to plant-based compared to meat-based dietary patterns. Seven studies identified 23 a posteriori dietary patterns and the analysis revealed that higher adherence to healthy and unhealthy dietary patterns was significantly associated risk of colorectal adenomas (RR = 0.81, 95% confidence interval = 0.71, 0.94 and RR = 1.24, 95% confidence interval = 1.13, 1.35, respectively) with no evidence of heterogeneity or publication bias. The results of this systematic review and meta-analysis indicate that dietary patterns may be associated with the risk of colorectal adenomas. © 2016 The British Dietetic Association Ltd.

  9. Evaluation of diet pattern and weight gain in postmenopausal women enrolled in the Women’s Health Initiative Observational Study

    USDA-ARS?s Scientific Manuscript database

    It is unclear which of four popular contemporary diet patterns is best for weight maintenance among postmenopausal women. Four dietary patterns were characterised among postmenopausal women aged 49-81 years (mean 63.6 (sd 7.4) years) from the Women's Health Initiative Observational Study: (1) a low-...

  10. Timing and regional patterns of snowmelt on Antarctic sea ice from passive microwave satellite observations

    NASA Astrophysics Data System (ADS)

    Arndt, Stefanie; Willmes, Sascha; Dierking, Wolfgang; Nicolaus, Marcel

    2016-04-01

    The better understanding of temporal variability and regional distribution of surface melt on Antarctic sea ice is crucial for the understanding of atmosphere-ocean interactions and the determination of mass and energy budgets of sea ice. Since large regions of Antarctic sea ice are covered with snow during most of the year, observed inter-annual and regional variations of surface melt mainly represents melt processes in the snow. It is therefore important to understand the mechanisms that drive snowmelt, both at different times of the year and in different regions around Antarctica. In this study we combine two approaches for observing both surface and volume snowmelt by means of passive microwave satellite data. The former is achieved by measuring diurnal differences of the brightness temperature TB at 37 GHz, the latter by analyzing the ratio TB(19GHz)/TB(37GHz). Moreover, we use both melt onset proxies to divide the Antarctic sea ice cover into characteristic surface melt patterns from 1988/89 to 2014/15. Our results indicate four characteristic melt types. On average, 43% of the ice-covered ocean shows diurnal freeze-thaw cycles in the surface snow layer, resulting in temporary melt (Type A), less than 1% shows continuous snowmelt throughout the snowpack, resulting in strong melt over a period of several days (Type B), 19% shows Type A and B taking place consecutively (Type C), and for 37% no melt is observed at all (Type D). Continuous melt is primarily observed in the outflow of the Weddell Gyre and in the northern Ross Sea, usually 20 days after the onset of temporary melt. Considering the entire data set, snowmelt processes and onset do not show significant temporal trends. Instead, areas of increasing (decreasing) sea-ice extent have longer (shorter) periods of continuous snowmelt.

  11. Determination of antennae patterns and radar reflection characteristics of aircraft

    NASA Astrophysics Data System (ADS)

    Bothe, H.; MacDonald, D.; Pool, A.

    1986-05-01

    The different types of aircraft antennas, their radiation characteristics and their preferred siting on the airframe are described. Emphasis is placed on the various methods for determining aircraft antenna radiation patterns (ARP) and advantages, disadvantages and limitations of each method are indicated. Mathematical modelling, model measurements and in-flight measurements in conjunction with the applied flight test techniques are included. Examples of practical results are given. Methods of determining aircraft radar characteristics are also described, indicating advantages, disadvantages and limitations of each method. Relevant fundamentals of radar theory are included only as necessary to appreciation of the real meaning of radar cross section (RCS) and angular glint. The measuring methods included are dynamic full-scale, static full-scale, sub-scale optical, ultrasonic and radio modelling. References are made to RCS measuring facilities in the USA and Europe and the UK Radio Modelling Facility is used extensively to exemplify the sub scale technique.

  12. Theoretical and observational determinations of the ionization coefficient of meteors

    NASA Astrophysics Data System (ADS)

    Jones, William

    1997-07-01

    We examine the problem of the determination of the ionization coefficient beta from both the theoretical and observational points of view. In the past, theoretical evaluations of beta in terms of the relevant scattering cross-sections have used the Massey-Sida formula, which we show to give results which are plainly incorrect. We derive an integral equation for beta and compare the results of its application to copper and iron with laboratory simulations. Agreement for the variation of the ionization coefficient with velocity is good. The ionization coefficient has been determined observationally by Verniani & Hawkins from a comparison of radar and visual observations, employing the luminous efficiency tau also obtained observationally by Verniani. However, this determination of tau would appear to be invalidated by fragmentation. There is good evidence that the radiation of cometary meteors is dominated by that of iron in the visual range, and we have accordingly re-analysed the data of Verniani & Hawkins using the luminous efficiency of iron obtained in simulation experiments. However, it is not possible to choose an iron concentration which gives agreement between the determination of the ionization coefficient by this means and its determination from the theoretical equation in terms of either scattering coefficients or simulation methods. The observational ionization coefficients are much lower than predicted by the present theory and we provisionally explain this as a consequence of transfer of charge from the meteoric ion to a molecule of the air. It is now possible for the meteoric atom to be re-ionized, but it is also possible at sufficiently high initial line densities for significant dissociative recombination of the electrons and nitrogen or oxygen to take place. This recombination will not take place in meteor trains simulated in an ionization chamber. We thus conclude that the present theory is limited to faint radio meteors at lower velocities (v<~35

  13. Determination of the Io heat flow. 1: Eclipse observations

    NASA Technical Reports Server (NTRS)

    Sinton, W. M.; Kaminski, C.

    1983-01-01

    The thermal emission from Io during eclipse by Jupiter yields data from which the total thermal flux from the volcanoes on the satellite surface can be estimated. Thermal infrared observations in spectral bands between 3.5 and 30 microns of five Io eclipse reappearances and one eclipse disappearance are reported and discussed. The thermal emission of the volcanoes which occurs almost all of the time was determined from the Io heat flux data. The thermal observations of Io are discussed with respect to previous thermophysical theories.

  14. Observation of Communication by Physical Education Teachers: Detecting Patterns in Verbal Behavior

    PubMed Central

    García-Fariña, Abraham; Jiménez-Jiménez, F.; Anguera, M. Teresa

    2018-01-01

    The aim of this study was to analyze the verbal behavior of primary school physical education teachers in a natural classroom setting in order to investigate patterns in social constructivist communication strategies before and after participation in a training program designed to familiarize teachers with these strategies. The participants were three experienced physical education teachers interacting separately with 65 students over a series of classes. Written informed consent was obtained from all the students' parents or legal guardians. An indirect observation tool (ADDEF) was designed specifically for the study within the theoretical framework, and consisted of a combined field format, with three dimensions, and category systems. Each dimension formed the basis for building a subsequent system of exhaustive and mutually exclusive categories. Twenty-nine sessions, grouped into two separate modules, were coded using the Atlas.ti 7 program, and a total of 1991 units (messages containing constructivist discursive strategies) were recorded. Analysis of intraobserver reliability showed almost perfect agreement. Lag sequential analysis, which is a powerful statistical technique based on the calculation of conditional and unconditional probabilities in prospective and retrospective lags, was performed in GSEQ5 software to search for verbal behavior patterns before and after the training program. At both time points, we detected a pattern formed by requests for information combined with the incorporation of students' contributions into the teachers' discourse and re-elaborations of answers. In the post-training phase, we detected new and stronger patterns in certain sessions, indicating that programs combining theoretical and practical knowledge can effectively increase teachers' repertoire of discursive strategies and ultimately promote active engagement in learning. This has important implications for the evaluation and development of teacher effectiveness in

  15. Observation of Communication by Physical Education Teachers: Detecting Patterns in Verbal Behavior.

    PubMed

    García-Fariña, Abraham; Jiménez-Jiménez, F; Anguera, M Teresa

    2018-01-01

    The aim of this study was to analyze the verbal behavior of primary school physical education teachers in a natural classroom setting in order to investigate patterns in social constructivist communication strategies before and after participation in a training program designed to familiarize teachers with these strategies. The participants were three experienced physical education teachers interacting separately with 65 students over a series of classes. Written informed consent was obtained from all the students' parents or legal guardians. An indirect observation tool (ADDEF) was designed specifically for the study within the theoretical framework, and consisted of a combined field format, with three dimensions, and category systems. Each dimension formed the basis for building a subsequent system of exhaustive and mutually exclusive categories. Twenty-nine sessions, grouped into two separate modules, were coded using the Atlas.ti 7 program, and a total of 1991 units (messages containing constructivist discursive strategies) were recorded. Analysis of intraobserver reliability showed almost perfect agreement. Lag sequential analysis, which is a powerful statistical technique based on the calculation of conditional and unconditional probabilities in prospective and retrospective lags, was performed in GSEQ5 software to search for verbal behavior patterns before and after the training program. At both time points, we detected a pattern formed by requests for information combined with the incorporation of students' contributions into the teachers' discourse and re-elaborations of answers. In the post-training phase, we detected new and stronger patterns in certain sessions, indicating that programs combining theoretical and practical knowledge can effectively increase teachers' repertoire of discursive strategies and ultimately promote active engagement in learning. This has important implications for the evaluation and development of teacher effectiveness in

  16. Determination of traffic intensity from camera images using image processing and pattern recognition techniques

    NASA Astrophysics Data System (ADS)

    Mehrübeoğlu, Mehrübe; McLauchlan, Lifford

    2006-02-01

    The goal of this project was to detect the intensity of traffic on a road at different times of the day during daytime. Although the work presented utilized images from a section of a highway, the results of this project are intended for making decisions on the type of intervention necessary on any given road at different times for traffic control, such as installation of traffic signals, duration of red, green and yellow lights at intersections, and assignment of traffic control officers near school zones or other relevant locations. In this project, directional patterns are used to detect and count the number of cars in traffic images over a fixed area of the road to determine local traffic intensity. Directional patterns are chosen because they are simple and common to almost all moving vehicles. Perspective vision effects specific to each camera orientation has to be considered, as they affect the size and direction of patterns to be recognized. In this work, a simple and fast algorithm has been developed based on horizontal directional pattern matching and perspective vision adjustment. The results of the algorithm under various conditions are presented and compared in this paper. Using the developed algorithm, the traffic intensity can accurately be determined on clear days with average sized cars. The accuracy is reduced on rainy days when the camera lens contains raindrops, when there are very long vehicles, such as trucks or tankers, in the view, and when there is very low light around dusk or dawn.

  17. Comportment and Communication Patterns among Hospitalist Physicians: Insight Gleaned Through Observation.

    PubMed

    Kotwal, Susrutha; Torok, Haruka; Khaliq, Waseem; Landis, Regina; Howell, Eric; Wright, Scott

    2015-08-01

    By 2014, there were more than 40,000 hospitalists delivering the majority of inpatient care in US hospitals. No empiric research has characterized hospitalist comportment and communication patterns as they care for patients. The chiefs of hospital medicine at five different hospitals were asked to identify their best hospitalists. These hospitalists were watched during their routine clinical care of patients. An observation tool was developed that focused on elements believed to be associated with excellent comportment and communication. One observer watched the physicians, taking detailed quantitative and qualitative field notes. A total of 26 hospitalists were shadowed. The mean age of the physicians was 38 years, and their average experience in hospital medicine was 6 years. The hospitalists were observed for a mean of 5 hours, during which time they saw an average of 7 patients (patient encounters observed N = 181). Physicians spent an average of 11 minutes with each patient. There was large variation in the extent to which desirable behaviors were performed. For example, most physicians (76%) started encounters with an open-ended question, and relatively few (30%) attempted to integrate nonmedical content into conversation with patients. This study represents a first step in trying to characterize comportment and communication in hospital medicine. Because hospitalists spend only a small proportion of their clinical time in direct patient care, it is imperative that excellent comportment and communication are clearly defined and established as a goal for every encounter.

  18. Mandatory Nap Times and Group Napping Patterns in Child Care: An Observational Study.

    PubMed

    Staton, Sally L; Smith, Simon S; Hurst, Cameron; Pattinson, Cassandra L; Thorpe, Karen J

    2017-01-01

    Policy provision for naps is typical in child care settings, but there is variability in the practices employed. One practice that might modify children's early sleep patterns is the allocation of a mandatory nap time in which all children are required to lie on their beds without alternate activity permitted. There is currently limited evidence of the effects of such practices on children's napping patterns. This study examined the association between duration of mandatory nap times and group-level napping patterns in child care settings. Observations were undertaken in a community sample of 113 preschool rooms with a scheduled nap time (N = 2,114 children). Results showed that 83.5% of child care settings implemented a mandatory nap time (range = 15-145 min) while 14.2% provided alternate activities for children throughout the nap time period. Overall, 31% of children napped during nap times. Compared to rooms with ≤ 30 min of mandatory nap time, rooms with 31-60 min and > 60 min of mandatory nap time had a two-and-a-half and fourfold increase, respectively, in the proportion of children napping. Nap onset latency did not significantly differ across groups. Among preschool children, exposure to longer mandatory nap times in child care may increase incidence of napping.

  19. Pilot scanning patterns while viewing cockpit displays of traffic information

    NASA Technical Reports Server (NTRS)

    Ellis, S. R.; Stark, L.

    1981-01-01

    Scanning eye movements of airline pilots were recorded while they judged air traffic situations displayed on cockpit displays of traffic information (CDTI). The observed 1st order transition patterns between points of interest on the display showed reliable deviation from those patterns predicted by the assumption of statistical independence. However, both patterns of transitions correlated quite well with each other. Accordingly, the assumption of independence provided a surprisingly good model of the results. Nevertheless, the deviation between the observed patterns of transition and that based on the assumption of independence was for all subjects in the direction of increased determinism. Thus, the results provide objective evidence consistent with the existence of "scanpaths" in the data.

  20. Determining coronal electron temperatures from observations with UVCS/SOHO

    NASA Technical Reports Server (NTRS)

    Fineschi, S.; Esser, R.; Habbal, S. R.; Karovska, M.; Romoli, M.; Strachan, L.; Kohl, J. L.; Huber, M. C. E.

    1995-01-01

    The electron temperature is a fundamental physical parameter of the coronal plasma. Currently, there are no direct measurements of this quantity in the extended corona. Observations with the Ultraviolet Coronagraph Spectrometer (UVCS) aboard the upcoming Solar and Heliospheric Observatory (SOHO) mission can provide the most direct determination of the electron kinetic temperature (or, more precisely, the electron velocity distribution along the line of sight). This measurement is based on the observation of the Thomson-scattered Lyman alpha (Ly-alpha) profile. This observation is made particularly challenging by the fact that the integrated intensity of the electron-scattered Ly-alpha line is about 10(exp 3) times fainter than that of the resonantly-scattered Ly-alpha component. In addition, the former is distributed across 50 A (FWHM), unlike the latter that is concentrated in 1 A. These facts impose stringent requirements on the stray-light rejection properties of the coronagraph/spectrometer, and in particular on the requirements for the grating. We make use of laboratory measurements of the UVCS Ly-alpha grating stray-light, and of simulated electron-scattered Ly-alpha profiles to estimate the expected confidence levels of electron temperature determination. Models of different structures typical of the corona (e.g., streamers, coronal holes) are used for this parameter study.

  1. 77 FR 474 - 2012 Annual Determination for Sea Turtle Observer Requirement

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-05

    ... Determination for Sea Turtle Observer Requirement AGENCY: National Marine Fisheries Service (NMFS), National... identified fisheries is to learn more about sea turtle interactions in a given fishery, evaluate existing measures to prevent or reduce prohibited sea turtle takes, and to determine whether additional measures to...

  2. Independent oscillatory patterns determine performance fluctuations in children with attention deficit/hyperactivity disorder.

    PubMed

    Yordanova, Juliana; Albrecht, Björn; Uebel, Henrik; Kirov, Roumen; Banaschewski, Tobias; Rothenberger, Aribert; Kolev, Vasil

    2011-06-01

    The maintenance of stable goal-directed behaviour is a hallmark of conscious executive control in humans. Notably, both correct and error human actions may have a subconscious activation-based determination. One possible source of subconscious interference may be the default mode network that, in contrast to attentional network, manifests intrinsic oscillations at very low (<0.1 Hz) frequencies. In the present study, we analyse the time dynamics of performance accuracy to search for multisecond periodic fluctuations of error occurrence. Attentional lapses in attention deficit/hyperactivity disorder are proposed to originate from interferences from intrinsically oscillating networks. Identifying periodic error fluctuations with a frequency<0.1 Hz in patients with attention deficit/hyperactivity disorder would provide a behavioural evidence for such interferences. Performance was monitored during a visual flanker task in 92 children (7- to 16-year olds), 47 with attention deficit/hyperactivity disorder, combined type and 45 healthy controls. Using an original approach, the time distribution of error occurrence was analysed in the frequency and time-frequency domains in order to detect rhythmic periodicity. Major results demonstrate that in both patients and controls, error behaviour was characterized by multisecond rhythmic fluctuations with a period of ∼12 s, appearing with a delay after transition to task. Only in attention deficit/hyperactivity disorder, was there an additional 'pathological' oscillation of error generation, which determined periodic drops of performance accuracy each 20-30 s. Thus, in patients, periodic error fluctuations were modulated by two independent oscillatory patterns. The findings demonstrate that: (i) attentive behaviour of children is determined by multisecond regularities; and (ii) a unique additional periodicity guides performance fluctuations in patients. These observations may re-conceptualize the understanding of attentive

  3. Patterns and determinants of small-quantity LNS utilization in rural Malawi and Mozambique: considerations for interventions with specialized nutritious foods.

    PubMed

    Kodish, Stephen R; Aburto, Nancy J; Nseluke Hambayi, Mutinta; Dibari, Filippo; Gittelsohn, Joel

    2017-01-01

    Small-quantity, lipid-based nutrient supplements (SQ-LNS) show promise to improve the quality of maternal and child diets, particularly during the first 1000 days of life. The potential of SQ-LNS to impact positively upon nutritional status relies on numerous factors, including complementary dietary intake, disease prevalence and dynamics of household utilization, including sharing practices. Therefore, this study sought to elucidate the patterns and determinants of SQ-LNS utilization among children 6-23 months and potential sharing practices of other household members prior to intervention development. In Ntchisi, Malawi and Cabo Delgado, Mozambique, both rural, agricultural settings, we conducted two home-feeding trials of 8 and 6 weeks, respectively, nested within a larger multi-phase, emergent formative research design. Multiple methods, including in-depth interviews (n = 38), direct meal observations (n = 80), full-day child observations (n = 38) and spot checks of SQ-LNS supply (n = 23), were conducted with households (n = 35 in Malawi; n = 24 in Mozambique). Overall, the SQ-LNS was utilized contrary to its recommended use, with 50% of households in Malawi reporting running out of stock too early and 87% of households in Mozambique either overusing or underusing the product. Utilization of SQ-LNS was manifested in four patterns of overuse and two of underuse and was determined by factors at multiple levels of influence. Maternal and child health efforts need to consider the reasons behind choices by households to overuse or underuse SQ-LNS and design intervention strategies to increase the likelihood of its appropriate utilization. © 2016 John Wiley & Sons Ltd.

  4. The Role of Model Complexity in Determining Patterns of Chlorophyll Variability in the Coastal Northwest North Atlantic

    NASA Astrophysics Data System (ADS)

    Kuhn, A. M.; Fennel, K.; Bianucci, L.

    2016-02-01

    A key feature of the North Atlantic Ocean's biological dynamics is the annual phytoplankton spring bloom. In the region comprising the continental shelf and adjacent deep ocean of the northwest North Atlantic, we identified two patterns of bloom development: 1) locations with cold temperatures and deep winter mixed layers, where the spring bloom peaks around April and the annual chlorophyll cycle has a large amplitude, and 2) locations with warmer temperatures and shallow winter mixed layers, where the spring bloom peaks earlier in the year, sometimes indiscernible from the fall bloom. These patterns result from a combination of limiting environmental factors and interactions among planktonic groups with different optimal requirements. Simple models that represent the ecosystem with a single phytoplankton (P) and a single zooplankton (Z) group are challenged to reproduce these ecological interactions. Here we investigate the effect that added complexity has on determining spatio-temporal chlorophyll. We compare two ecosystem models, one that contains one P and one Z group, and one with two P and three Z groups. We consider three types of changes in complexity: 1) added dependencies among variables (e.g., temperature dependent rates), 2) modified structural pathways, and 3) added pathways. Subsets of the most sensitive parameters are optimized in each model to replicate observations in the region. For computational efficiency, the parameter optimization is performed using 1D surrogates of a 3D model. We evaluate how model complexity affects model skill, and whether the optimized parameter sets found for each model modify the interpretation of ecosystem functioning. Spatial differences in the parameter sets that best represent different areas hint at the existence of different ecological communities or at physical-biological interactions that are not represented in the simplest model. Our methodology emphasizes the combined use of observations, 1D models to help

  5. Leisure time physical activity in Saudi Arabia: prevalence, pattern and determining factors.

    PubMed

    Amin, Tarek Tawfik; Al Khoudair, Ali Salah; Al Harbi, Mohammad Abdulwahab; Al Ali, Ahmed Radi

    2012-01-01

    Identification of reliable predictors of leisure time physical activity (LTPA) will enable healthcare providers to intervene and change the patterns of LTPA in the population to improve community health. The objectives of this study were to determine prevalence and pattern of LTPA among adult Saudis aged 18-65 years, and to define the socio-demographic determinants that correlate with LTPA in Al-Hassa, Saudi Arabia. A cross-sectional study of 2176 adult Saudis attending urban and rural primary health care centers were selected using a multistage proportionate sampling method. Participants were personally interviewed to gather information regarding socio-demographics, physical activity pattern using the Global Physical Activity Questionnaire (GPAQ). Physical activity (PA) in each domain was expressed in metabolic equivalents (METs). The median total METs minutes/week for LTPA for both genders was 256, higher for men (636 METs minutes/week) compared to women (249 METs minutes/week). Overall, only 19.8% of the total PA was derived from LTPA. Of the sampled population 50.0% reported doing no leisure activity. Using the cut off of 600 METs-minutes/day or 150 minutes of moderate intensity over 5 or more days/week, only 21.0% of the included sample were considered as being sufficiently active and 10.4% were in the high active category with beneficial health effects. Multivariate regression analysis showed that male, younger age (<35 years), absence of chronic disease conditions and moderate level of total PA were significant predictors for being active in the LTPA domain. The prevalence and intensity of LTPA among the included sample demonstrated low levels. Nearly 80% of the included sample population did not achieve the recommended LTPA level with beneficial health effects. Female gender, urban residence and associated chronic diseases correlated with a low LTPA.

  6. 75 FR 27649 - 2010 Annual Determination for Sea Turtle Observer Requirements

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-18

    ... enable the design of an appropriate sampling program and to ensure collection of sufficient scientific... Observer Coverage in a Fishery Listed on the 2010 Annual Determination The design of any observer program.... During the program design, NMFS will be guided by the following standards for distributing and placing...

  7. Patterns of shading tolerance determined from experimental ...

    EPA Pesticide Factsheets

    An extensive review of the experimental literature on seagrass shading evaluated the relationship between experimental light reductions, duration of experiment and seagrass response metrics to determine whether there were consistent statistical patterns. There were highly significant linear relationships of both percent biomass and percent shoot density reduction versus percent light reduction (versus controls), although unexplained variation in the data were high. Duration of exposure affected extent of response for both metrics, but was more clearly a factor in biomass response. Both biomass and shoot density showed linear responses to duration of light reduction for treatments 60%. Unexplained variation was again high, and greater for shoot density than biomass. With few exceptions, regressions of both biomass and shoot density on light reduction for individual species and for genera were statistically significant, but also tended to show high degrees of variability in data. Multivariate regressions that included both percent light reduction and duration of reduction as dependent variables increased the percentage of variation explained in almost every case. Analysis of response data by seagrass life history category (Colonizing, Opportunistic, Persistent) did not yield clearly separate response relationships in most cases. Biomass tended to show somewhat less variation in response to light reduction than shoot density, and of the two, may be the prefe

  8. Quantitative analysis of crystalline pharmaceuticals in tablets by pattern-fitting procedure using X-ray diffraction pattern.

    PubMed

    Takehira, Rieko; Momose, Yasunori; Yamamura, Shigeo

    2010-10-15

    A pattern-fitting procedure using an X-ray diffraction pattern was applied to the quantitative analysis of binary system of crystalline pharmaceuticals in tablets. Orthorhombic crystals of isoniazid (INH) and mannitol (MAN) were used for the analysis. Tablets were prepared under various compression pressures using a direct compression method with various compositions of INH and MAN. Assuming that X-ray diffraction pattern of INH-MAN system consists of diffraction intensities from respective crystals, observed diffraction intensities were fitted to analytic expression based on X-ray diffraction theory and separated into two intensities from INH and MAN crystals by a nonlinear least-squares procedure. After separation, the contents of INH were determined by using the optimized normalization constants for INH and MAN. The correction parameter including all the factors that are beyond experimental control was required for quantitative analysis without calibration curve. The pattern-fitting procedure made it possible to determine crystalline phases in the range of 10-90% (w/w) of the INH contents. Further, certain characteristics of the crystals in the tablets, such as the preferred orientation, size of crystallite, and lattice disorder were determined simultaneously. This method can be adopted to analyze compounds whose crystal structures are known. It is a potentially powerful tool for the quantitative phase analysis and characterization of crystals in tablets and powders using X-ray diffraction patterns. Copyright 2010 Elsevier B.V. All rights reserved.

  9. Dietary patterns are associated with disease risk among participants in the women's health initiative observational study

    USDA-ARS?s Scientific Manuscript database

    Coronary heart disease (CHD) is the leading cause of death in women. A nested case-control study tested whether dietary patterns predicted CHD events among 1224 participants in the Women’s Health Initiative-Observational Study (WHI-OS) with centrally confirmed CHD, fatal or nonfatal myocardial infar...

  10. Air motion determination by tracking humidity patterns in isentropic layers

    NASA Technical Reports Server (NTRS)

    Mancuso, R. L.; Hall, D. J.

    1975-01-01

    Determining air motions by tracking humidity patterns in isentropic layers was investigated. Upper-air rawinsonde data from the NSSL network and from the AVE-II pilot experiment were used to simulate temperature and humidity profile data that will eventually be available from geosynchronous satellites. Polynomial surfaces that move with time were fitted to the mixing-ratio values of the different isentropic layers. The velocity components of the polynomial surfaces are part of the coefficients that are determined in order to give an optimum fitting of the data. In the mid-troposphere, the derived humidity motions were in good agreement with the winds measured by rawinsondes so long as there were few or no clouds and the lapse rate was relatively stable. In the lower troposphere, the humidity motions were unreliable primarily because of nonadiabatic processes and unstable lapse rates. In the upper troposphere, the humidity amounts were too low to be measured with sufficient accuracy to give reliable results. However, it appears that humidity motions could be used to provide mid-tropospheric wind data over large regions of the globe.

  11. Vitality Forms Processing in the Insula during Action Observation: A Multivoxel Pattern Analysis

    PubMed Central

    Di Cesare, Giuseppe; Valente, Giancarlo; Di Dio, Cinzia; Ruffaldi, Emanuele; Bergamasco, Massimo; Goebel, Rainer; Rizzolatti, Giacomo

    2016-01-01

    Observing the style of an action done by others allows the observer to understand the cognitive state of the agent. This information has been defined by Stern “vitality forms”. Previous experiments showed that the dorso-central insula is selectively active both during vitality form observation and execution. In the present study, we presented participants with videos showing hand actions performed with different velocities and asked them to judge either their vitality form (gentle, neutral, rude) or their velocity (slow, medium, fast). The aim of the present study was to assess, using multi-voxel pattern analysis, whether vitality forms and velocities of observed goal-directed actions are differentially processed in the insula, and more specifically whether action velocity is encoded per se or it is an element that triggers neural populations of the insula encoding the vitality form. The results showed that, consistently across subjects, in the dorso-central sector of the insula there were voxels selectively tuned to vitality forms, while voxel tuned to velocity were rare. These results indicate that the dorso-central insula, which previous data showed to be involved in the vitality form processing, contains voxels specific for the action style processing. PMID:27375461

  12. Vitality Forms Processing in the Insula during Action Observation: A Multivoxel Pattern Analysis.

    PubMed

    Di Cesare, Giuseppe; Valente, Giancarlo; Di Dio, Cinzia; Ruffaldi, Emanuele; Bergamasco, Massimo; Goebel, Rainer; Rizzolatti, Giacomo

    2016-01-01

    Observing the style of an action done by others allows the observer to understand the cognitive state of the agent. This information has been defined by Stern "vitality forms". Previous experiments showed that the dorso-central insula is selectively active both during vitality form observation and execution. In the present study, we presented participants with videos showing hand actions performed with different velocities and asked them to judge either their vitality form (gentle, neutral, rude) or their velocity (slow, medium, fast). The aim of the present study was to assess, using multi-voxel pattern analysis, whether vitality forms and velocities of observed goal-directed actions are differentially processed in the insula, and more specifically whether action velocity is encoded per se or it is an element that triggers neural populations of the insula encoding the vitality form. The results showed that, consistently across subjects, in the dorso-central sector of the insula there were voxels selectively tuned to vitality forms, while voxel tuned to velocity were rare. These results indicate that the dorso-central insula, which previous data showed to be involved in the vitality form processing, contains voxels specific for the action style processing.

  13. Patterns of Drugs and Drug Metabolites Observed in Meconium: What Do They Mean?

    PubMed

    McMillin, Gwendolyn A; Wood, Kelly E; Strathmann, Frederick G; Krasowski, Matthew D

    2015-10-01

    Meconium drug testing is performed to detect potentially harmful drug exposures in a newborn. Interpretation of meconium drug testing results can be complicated based on the patterns and proportional concentrations of the drug(s) and/or drug metabolite(s) detected. The objective of this study was to analyze meconium drug testing patterns in a de-identified dataset from a national reference laboratory (n = 76,631) and in a subset of the data, wherein specimens originated at a single academic medical center for which detailed chart review was possible (n = 3635). Meconium testing was performed using 11 immunoassay-based drug screens. Specimens that were positive for one or more drug screens were reflexed to corresponding confirmation tests performed by gas chromatography or liquid chromatography with mass spectrometric detection, targeted to identify and quantitate specific parent drug(s) and metabolite(s). The positivity rate was the highest for the cannabis metabolite 11-nor-9-carboxy-delta-9-tetrahydrocannabinol (25.2%, n = 18,643), followed by opiates/oxycodone (23.2%, n = 17,778), amphetamine/methamphetamine (6.7%, n = 5134), cocaine metabolites (5.5%, n = 4205), methadone (5.3%, n = 4093), benzodiazepines (3.4%, n = 2603), barbiturates (1.1%, n = 834), propoxyphene (1.0%, n = 749), and phencyclidine (0.1%, n = 44). Based on documented pharmacy history, drugs administered to either the mother or newborn during the birth hospitalization were detected in meconium, providing evidence that drugs can be incorporated into meconium rapidly. Drugs administered directly to the newborn after birth were recovered in meconium as both parent drug and metabolites, providing evidence of neonatal metabolism. Overall, patterns observed in meconium exhibited many similarities to those patterns commonly reported with urine drug testing. Interpretation of meconium drug testing results requires comparison of results with clinical and analytical expectations, including maternal

  14. Population genetic structure and direct observations reveal sex-reversed patterns of dispersal in a cooperative bird.

    PubMed

    Harrison, Xavier A; York, Jennifer E; Young, Andrew J

    2014-12-01

    Sex-biased dispersal is pervasive and has diverse evolutionary implications, but the fundamental drivers of dispersal sex biases remain unresolved. This is due in part to limited diversity within taxonomic groups in the direction of dispersal sex biases, which leaves hypothesis testing critically dependent upon identifying rare reversals of taxonomic norms. Here, we use a combination of observational and genetic data to demonstrate a rare reversal of the avian sex bias in dispersal in the cooperatively breeding white-browed sparrow weaver (Plocepasser mahali). Direct observations revealed that (i) natal philopatry was rare, with both sexes typically dispersing locally to breed, and (ii), unusually for birds, males bred at significantly greater distances from their natal group than females. Population genetic analyses confirmed these patterns, as (i) corrected Assignment index (AIc), FST tests and isolation-by-distance metrics were all indicative of longer dispersal distances among males than females, and (ii) spatial autocorrelation analysis indicated stronger within-group genetic structure among females than males. Examining the spatial scale of extra-group mating highlighted that the resulting 'sperm dispersal' could have acted in concert with individual dispersal to generate these genetic patterns, but gamete dispersal alone cannot account entirely for the sex differences in genetic structure observed. That leading hypotheses for the evolution of dispersal sex biases cannot readily account for these sex-reversed patterns of dispersal in white-browed sparrow weavers highlights the continued need for attention to alternative explanations for this enigmatic phenomenon. We highlight the potential importance of sex differences in the distances over which dispersal opportunities can be detected. © 2014 The Authors. Molecular Ecology Published by John Wiley & Sons Ltd.

  15. Evolutionary pattern of mutation in the factor IX genes of great apes: How does it compare to the pattern of recent germline mutation in patients with hemophilia B?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Grouse, L.H.; Ketterling, R.P.; Sommer, S.S.

    Most mutations causing hemophilia B have arisen within the past 150 years. By correcting for multiple biases, the underlying rates of spontaneous germline mutation have been estimated in the factor IX gene. From these rates, an underlying pattern of mutation has emerged. To determine if this pattern compares to a underlying pattern found in the great apes, sequence changes were determined in intronic regions of the factor IX gene. The following species were studied: Gorilla gorilla, Pan troglodytes (chimpanzee), Pongo pygmacus (orangutan) and Homo sapiens. Intronic sequences at least 200 bp from a splice junction were randomly chosen, amplified bymore » cross-species PCR, and sequenced. These regions are expected to be subject to little if any selective pressure. Early diverged species of Old World monkeys were also studied to help determine the direction of mutational changes. A total of 62 sequence changes were observed. Initial data suggest that the average pattern since evolution of the great apes has a paucity of transitions at CpG dinucleotides and an excess of microinsertions to microdeletions when compared to the pattern observed in humans during the past 150 years (p<.05). A larger study is in progress to confirm these results.« less

  16. Patterns in Crew-Initiated Photography of Earth from ISS - Is Earth Observation a Salutogenic Experience?

    NASA Technical Reports Server (NTRS)

    Robinson, Julie A.; Slack, Kelley; Olson, V.; Trenchard, M.; Willis, K.; Baskin, P.

    2006-01-01

    This viewgraph presentation asks the question "Is the observation of earth from the ISS a positive (salutogenic) experience for crew members?"All images are distributed to the public via the "Gateway to Astronaut Photography of Earth at http://eol.jsc.nasa.gov. The objectives of the study are (1) Mine the dataset of Earth Observation photography--What can it tell us about the importance of viewing the Earth as a positive experience for the crewmembers? (2) Quantify extent to which photography was self-initiated (not requested by scientists) (3) Identify patterns photography activities versus scientific requested photography.

  17. On the ability of RegCM4 regional climate model to simulate surface solar radiation patterns over Europe: an assessment using satellite-based observations

    NASA Astrophysics Data System (ADS)

    Alexandri, G.; Georgoulias, A. K.; Zanis, P.; Katragkou, E.; Tsikerdekis, A.; Kourtidis, K.; Meleti, C.

    2015-07-01

    In this work, we assess the ability of RegCM4 regional climate model to simulate surface solar radiation (SSR) patterns over Europe. A decadal RegCM4 run (2000-2009) was implemented and evaluated against satellite-based observations from the Satellite Application Facility on Climate Monitoring (CM SAF) showing that the model simulates adequately the SSR patterns over the region. The bias between RegCM4 and CM SAF is +1.54 % for MFG (Meteosat First Generation) and +3.34 % for MSG (Meteosat Second Generation) observations. The relative contribution of parameters that determine the transmission of solar radiation within the atmosphere to the deviation appearing between RegCM4 and CM SAF SSR is also examined. Cloud macrophysical and microphysical properties such as cloud fractional cover (CFC), cloud optical thickness (COT) and cloud effective radius (Re) from RegCM4 are evaluated against data from CM SAF. The same procedure is repeated for aerosol optical properties such as aerosol optical depth (AOD), asymmetry factor (ASY) and single scattering albedo (SSA), as well as other parameters including surface broadband albedo (ALB) and water vapor amount (WV) using data from MACv1 aerosol climatology, from CERES satellite sensors and from ERA-Interim reanalysis. It is shown here that the good agreement between RegCM4 and satellite-based SSR observations can be partially attributed to counteracting effects among the above mentioned parameters. The contribution of each parameter to the RegCM4-CM SAF SSR deviations is estimated with the combined use of the aforementioned data and a radiative transfer model (SBDART). CFC, COT and AOD are the major determinants of these deviations; however, the other parameters also play an important role for specific regions and seasons.

  18. Parallel ridge pattern on dermoscopy: observation in non-melanoma cases*

    PubMed Central

    Fracaroli, Tainá Scalfoni; Lavorato, Fernanda Guedes; Maceira, Juan Piñeiro; Barcaui, Carlos

    2013-01-01

    The acral melanoma is the most prevalent type of melanoma in the non-Caucasian population, and dermoscopy is a useful tool for earlier diagnosis and differentiation from benign lesions. The dermoscopic pattern often associated with melanoma on the volar skin is the parallel ridge, with 99% specificity according to the literature. However, this pattern can also occur in several benign acral lesions, so it is important to make a good interpretation of this pattern, along with the clinical history and evolution. PMID:24068145

  19. Variation in stem mortality rates determines patterns of above-ground biomass in Amazonian forests: implications for dynamic global vegetation models.

    PubMed

    Johnson, Michelle O; Galbraith, David; Gloor, Manuel; De Deurwaerder, Hannes; Guimberteau, Matthieu; Rammig, Anja; Thonicke, Kirsten; Verbeeck, Hans; von Randow, Celso; Monteagudo, Abel; Phillips, Oliver L; Brienen, Roel J W; Feldpausch, Ted R; Lopez Gonzalez, Gabriela; Fauset, Sophie; Quesada, Carlos A; Christoffersen, Bradley; Ciais, Philippe; Sampaio, Gilvan; Kruijt, Bart; Meir, Patrick; Moorcroft, Paul; Zhang, Ke; Alvarez-Davila, Esteban; Alves de Oliveira, Atila; Amaral, Ieda; Andrade, Ana; Aragao, Luiz E O C; Araujo-Murakami, Alejandro; Arets, Eric J M M; Arroyo, Luzmila; Aymard, Gerardo A; Baraloto, Christopher; Barroso, Jocely; Bonal, Damien; Boot, Rene; Camargo, Jose; Chave, Jerome; Cogollo, Alvaro; Cornejo Valverde, Fernando; Lola da Costa, Antonio C; Di Fiore, Anthony; Ferreira, Leandro; Higuchi, Niro; Honorio, Euridice N; Killeen, Tim J; Laurance, Susan G; Laurance, William F; Licona, Juan; Lovejoy, Thomas; Malhi, Yadvinder; Marimon, Bia; Marimon, Ben Hur; Matos, Darley C L; Mendoza, Casimiro; Neill, David A; Pardo, Guido; Peña-Claros, Marielos; Pitman, Nigel C A; Poorter, Lourens; Prieto, Adriana; Ramirez-Angulo, Hirma; Roopsind, Anand; Rudas, Agustin; Salomao, Rafael P; Silveira, Marcos; Stropp, Juliana; Ter Steege, Hans; Terborgh, John; Thomas, Raquel; Toledo, Marisol; Torres-Lezama, Armando; van der Heijden, Geertje M F; Vasquez, Rodolfo; Guimarães Vieira, Ima Cèlia; Vilanova, Emilio; Vos, Vincent A; Baker, Timothy R

    2016-12-01

    Understanding the processes that determine above-ground biomass (AGB) in Amazonian forests is important for predicting the sensitivity of these ecosystems to environmental change and for designing and evaluating dynamic global vegetation models (DGVMs). AGB is determined by inputs from woody productivity [woody net primary productivity (NPP)] and the rate at which carbon is lost through tree mortality. Here, we test whether two direct metrics of tree mortality (the absolute rate of woody biomass loss and the rate of stem mortality) and/or woody NPP, control variation in AGB among 167 plots in intact forest across Amazonia. We then compare these relationships and the observed variation in AGB and woody NPP with the predictions of four DGVMs. The observations show that stem mortality rates, rather than absolute rates of woody biomass loss, are the most important predictor of AGB, which is consistent with the importance of stand size structure for determining spatial variation in AGB. The relationship between stem mortality rates and AGB varies among different regions of Amazonia, indicating that variation in wood density and height/diameter relationships also influences AGB. In contrast to previous findings, we find that woody NPP is not correlated with stem mortality rates and is weakly positively correlated with AGB. Across the four models, basin-wide average AGB is similar to the mean of the observations. However, the models consistently overestimate woody NPP and poorly represent the spatial patterns of both AGB and woody NPP estimated using plot data. In marked contrast to the observations, DGVMs typically show strong positive relationships between woody NPP and AGB. Resolving these differences will require incorporating forest size structure, mechanistic models of stem mortality and variation in functional composition in DGVMs. © 2016 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

  20. Identifying patterns of item missing survey data using latent groups: an observational study

    PubMed Central

    McElwee, Paul; Nathan, Andrea; Burton, Nicola W; Turrell, Gavin

    2017-01-01

    Objectives To examine whether respondents to a survey of health and physical activity and potential determinants could be grouped according to the questions they missed, known as ‘item missing’. Design Observational study of longitudinal data. Setting Residents of Brisbane, Australia. Participants 6901 people aged 40–65 years in 2007. Materials and methods We used a latent class model with a mixture of multinomial distributions and chose the number of classes using the Bayesian information criterion. We used logistic regression to examine if participants’ characteristics were associated with their modal latent class. We used logistic regression to examine whether the amount of item missing in a survey predicted wave missing in the following survey. Results Four per cent of participants missed almost one-fifth of the questions, and this group missed more questions in the middle of the survey. Eighty-three per cent of participants completed almost every question, but had a relatively high missing probability for a question on sleep time, a question which had an inconsistent presentation compared with the rest of the survey. Participants who completed almost every question were generally younger and more educated. Participants who completed more questions were less likely to miss the next longitudinal wave. Conclusions Examining patterns in item missing data has improved our understanding of how missing data were generated and has informed future survey design to help reduce missing data. PMID:29084795

  1. Patterns of marriage and reproductive practices: is there any relationship?

    PubMed

    Vedadhir, Abouali; Taghizadeh, Ziba; Behmanesh, Fereshteh; Ebadi, Abbas; Pourreza, Abulghasem; Abbasi-Shavazi, Mohammad Jalal

    2017-04-01

    Today, a transition from traditional to modern marriages can be observed in many countries. This shift in patterns of marriage has evidently affected childbearing and reproductive practices. This study aimed to examine the relationship between patterns of marriage and reproductive practices in Iran. Hence, 880 married women, aged 15-49 years old, living in the North of Iran were selected using a multi-stage cluster sampling strategy and their patterns of marriage and reproductive practices were cross sectionally studied. The results revealed that there were no significant differences in the reproductive practices by three main patterns of marriage in Babol, Iran. The study also indicated that there were no significant differences in reproductive practices in three patterns of marriage after controlling for socio-economic variables. It seems that apart from the patterns of marriage, other influencing factors are the determinants of fertility in women, and the policy-makers of Iran need to pay attention to these determinants before making any decisions in this area.

  2. Multimorbidity prevalence and patterns across socioeconomic determinants: a cross-sectional survey.

    PubMed

    Agborsangaya, Calypse B; Lau, Darren; Lahtinen, Markus; Cooke, Tim; Johnson, Jeffrey A

    2012-03-19

    Studies on the prevalence of multimorbidity, defined as having two or more chronic conditions, have predominantly focused on the elderly. We estimated the prevalence and specific patterns of multimorbidity across different adult age groups. Furthermore, we examined the associations of multimorbidity with socio-demographic factors. Using data from the Health Quality Council of Alberta (HQCA) 2010 Patient Experience Survey, the prevalence of self reported multimorbidity was assessed by telephone interview among a sample of 5010 adults (18 years and over) from the general population. Logistic regression analyses were performed to determine the association between a range of socio-demographic factors and multimorbidity. The overall age- and sex-standardized prevalence of multimorbidity was 19.0% in the surveyed general population. Of those with multimorbidity, 70.2% were aged less than 65 years. The most common pairing of chronic conditions was chronic pain and arthritis. Age, sex, income and family structure were independently associated with multimorbidity. Multimorbidity is a common occurrence in the general adult population, and is not limited to the elderly. Future prevention programs and practice guidelines should take into account the common patterns of multimorbidity.

  3. The stress state near Spanish Peaks, colorado determined from a dike pattern

    USGS Publications Warehouse

    Muller, O.H.; Pollard, D.D.

    1977-01-01

    The radial pattern of syenite and syenodiorite dikes of the Spanish Peaks region is analysed using theories of elasticity and dike emplacement. The three basic components of Ode??'s model for the dike pattern (a pressurized, circular hole; a rigid, planar boundary; and uniform regional stresses) are adopted, but modified to free the regional stresses from the constraint of being orthogonal to the rigid boundary. Dike areal density, the White Peaks intrusion, the strike of the upturned Mesozoic strata, and the contact between these strata and the intensely folded and faulted Paleozoic rocks are used to brient the rigid boundary along a north-south line. The line of dike terminations locates the rigid boundary about 8 km west of West Peak. The location of a circular plug, Goemmer Butte, is chosen as a point of isotropic stress. A map correlating the location of isotropic stress points with regional stress parameters is derived from the theory and used to determine a regional stress orientation (N82E) and a normalized stress magnitude. The stress trajectory map constructed using these parameters mimics the dike pattern exceptionally well. The model indicates that the regional principal stress difference was less than 0.05 times the driving pressure in the West Peak intrusion. The regional stress difference probably did not exced 5 MN/m2. ?? 1977 Birkha??user Verlag.

  4. The fitness cost of mis-splicing is the main determinant of alternative splicing patterns.

    PubMed

    Saudemont, Baptiste; Popa, Alexandra; Parmley, Joanna L; Rocher, Vincent; Blugeon, Corinne; Necsulea, Anamaria; Meyer, Eric; Duret, Laurent

    2017-10-30

    Most eukaryotic genes are subject to alternative splicing (AS), which may contribute to the production of protein variants or to the regulation of gene expression via nonsense-mediated messenger RNA (mRNA) decay (NMD). However, a fraction of splice variants might correspond to spurious transcripts and the question of the relative proportion of splicing errors to functional splice variants remains highly debated. We propose a test to quantify the fraction of AS events corresponding to errors. This test is based on the fact that the fitness cost of splicing errors increases with the number of introns in a gene and with expression level. We analyzed the transcriptome of the intron-rich eukaryote Paramecium tetraurelia. We show that in both normal and in NMD-deficient cells, AS rates strongly decrease with increasing expression level and with increasing number of introns. This relationship is observed for AS events that are detectable by NMD as well as for those that are not, which invalidates the hypothesis of a link with the regulation of gene expression. Our results show that in genes with a median expression level, 92-98% of observed splice variants correspond to errors. We observed the same patterns in human transcriptomes and we further show that AS rates correlate with the fitness cost of splicing errors. These observations indicate that genes under weaker selective pressure accumulate more maladaptive substitutions and are more prone to splicing errors. Thus, to a large extent, patterns of gene expression variants simply reflect the balance between selection, mutation, and drift.

  5. Indigenous Students in Bolivian Primary Schools: Patterns and Determinants of Inequities. A World Bank Study.

    ERIC Educational Resources Information Center

    McEwan, Patrick J.; Jimenez, Wilson

    This paper examines the patterns and determinants of inequities between indigenous and non-indigenous students in Bolivian primary (elementary) schools, using a 1997 survey of third and sixth graders. Analysis shows that, on average, indigenous students are of lower socioeconomic status, and their schools appear to have fewer instructional…

  6. Chang’E-5T Orbit Determination Using Onboard GPS Observations

    PubMed Central

    Su, Xing; Geng, Tao; Li, Wenwen; Zhao, Qile; Xie, Xin

    2017-01-01

    In recent years, Global Navigation Satellite System (GNSS) has played an important role in Space Service Volume, the region enclosing the altitudes above 3000 km up to 36,000 km. As an in-flight test for the feasibility as well as for the performance of GNSS-based satellite orbit determination (OD), the Chinese experimental lunar mission Chang’E-5T had been equipped with an onboard high-sensitivity GNSS receiver with GPS and GLONASS tracking capability. In this contribution, the 2-h onboard GPS data are evaluated in terms of tracking performance as well as observation quality. It is indicated that the onboard receiver can track 7–8 GPS satellites per epoch on average and the ratio of carrier to noise spectral density (C/N0) values are higher than 28 dB-Hz for 90% of all the observables. The C1 code errors are generally about 4.15 m but can be better than 2 m with C/N0 values over 36 dB-Hz. GPS-based Chang’E-5T OD is performed and the Helmert variance component estimation method is investigated to determine the weights of code and carrier phase observations. The results reveal that the orbit consistency is about 20 m. OD is furthermore analyzed with GPS data screened out according to different C/N0 thresholds. It is indicated that for the Chang’E-5T, the precision of OD is dominated by the number of observed satellite. Although increased C/N0 thresholds can improve the overall data quality, the available number of GPS observations is greatly reduced and the resulting orbit solution is poor. PMID:28587174

  7. Chang'E-5T Orbit Determination Using Onboard GPS Observations.

    PubMed

    Su, Xing; Geng, Tao; Li, Wenwen; Zhao, Qile; Xie, Xin

    2017-06-01

    In recent years, Global Navigation Satellite System (GNSS) has played an important role in Space Service Volume, the region enclosing the altitudes above 3000 km up to 36,000 km. As an in-flight test for the feasibility as well as for the performance of GNSS-based satellite orbit determination (OD), the Chinese experimental lunar mission Chang'E-5T had been equipped with an onboard high-sensitivity GNSS receiver with GPS and GLONASS tracking capability. In this contribution, the 2-h onboard GPS data are evaluated in terms of tracking performance as well as observation quality. It is indicated that the onboard receiver can track 7-8 GPS satellites per epoch on average and the ratio of carrier to noise spectral density (C/N0) values are higher than 28 dB-Hz for 90% of all the observables. The C1 code errors are generally about 4.15 m but can be better than 2 m with C/N0 values over 36 dB-Hz. GPS-based Chang'E-5T OD is performed and the Helmert variance component estimation method is investigated to determine the weights of code and carrier phase observations. The results reveal that the orbit consistency is about 20 m. OD is furthermore analyzed with GPS data screened out according to different C/N0 thresholds. It is indicated that for the Chang'E-5T, the precision of OD is dominated by the number of observed satellite. Although increased C/N0 thresholds can improve the overall data quality, the available number of GPS observations is greatly reduced and the resulting orbit solution is poor.

  8. Tropically driven and externally forced patterns of Antarctic sea ice change: reconciling observed and modeled trends

    NASA Astrophysics Data System (ADS)

    Schneider, David P.; Deser, Clara

    2018-06-01

    Recent work suggests that natural variability has played a significant role in the increase of Antarctic sea ice extent during 1979-2013. The ice extent has responded strongly to atmospheric circulation changes, including a deepened Amundsen Sea Low (ASL), which in part has been driven by tropical variability. Nonetheless, this increase has occurred in the context of externally forced climate change, and it has been difficult to reconcile observed and modeled Antarctic sea ice trends. To understand observed-model disparities, this work defines the internally driven and radiatively forced patterns of Antarctic sea ice change and exposes potential model biases using results from two sets of historical experiments of a coupled climate model compared with observations. One ensemble is constrained only by external factors such as greenhouse gases and stratospheric ozone, while the other explicitly accounts for the influence of tropical variability by specifying observed SST anomalies in the eastern tropical Pacific. The latter experiment reproduces the deepening of the ASL, which drives an increase in regional ice extent due to enhanced ice motion and sea surface cooling. However, the overall sea ice trend in every ensemble member of both experiments is characterized by ice loss and is dominated by the forced pattern, as given by the ensemble-mean of the first experiment. This pervasive ice loss is associated with a strong warming of the ocean mixed layer, suggesting that the ocean model does not locally store or export anomalous heat efficiently enough to maintain a surface environment conducive to sea ice expansion. The pervasive upper-ocean warming, not seen in observations, likely reflects ocean mean-state biases.

  9. Tropically driven and externally forced patterns of Antarctic sea ice change: reconciling observed and modeled trends

    NASA Astrophysics Data System (ADS)

    Schneider, David P.; Deser, Clara

    2017-09-01

    Recent work suggests that natural variability has played a significant role in the increase of Antarctic sea ice extent during 1979-2013. The ice extent has responded strongly to atmospheric circulation changes, including a deepened Amundsen Sea Low (ASL), which in part has been driven by tropical variability. Nonetheless, this increase has occurred in the context of externally forced climate change, and it has been difficult to reconcile observed and modeled Antarctic sea ice trends. To understand observed-model disparities, this work defines the internally driven and radiatively forced patterns of Antarctic sea ice change and exposes potential model biases using results from two sets of historical experiments of a coupled climate model compared with observations. One ensemble is constrained only by external factors such as greenhouse gases and stratospheric ozone, while the other explicitly accounts for the influence of tropical variability by specifying observed SST anomalies in the eastern tropical Pacific. The latter experiment reproduces the deepening of the ASL, which drives an increase in regional ice extent due to enhanced ice motion and sea surface cooling. However, the overall sea ice trend in every ensemble member of both experiments is characterized by ice loss and is dominated by the forced pattern, as given by the ensemble-mean of the first experiment. This pervasive ice loss is associated with a strong warming of the ocean mixed layer, suggesting that the ocean model does not locally store or export anomalous heat efficiently enough to maintain a surface environment conducive to sea ice expansion. The pervasive upper-ocean warming, not seen in observations, likely reflects ocean mean-state biases.

  10. Patterns and Mechanisms of Evolutionary Transitions between Genetic Sex-Determining Systems

    PubMed Central

    Sander van Doorn, G.

    2014-01-01

    The diversity and patchy phylogenetic distribution of genetic sex-determining mechanisms observed in some taxa is thought to have arisen by the addition, modification, or replacement of regulators at the upstream end of the sex-determining pathway. Here, I review the various evolutionary forces acting on upstream regulators of sexual development that can cause transitions between sex-determining systems. These include sex-ratio selection and pleiotropic benefits, as well as indirect selection mechanisms involving sex-linked sexually antagonistic loci or recessive deleterious mutations. Most of the current theory concentrates on the population–genetic aspects of sex-determination transitions, using models that do not reflect the developmental mechanisms involved in sex determination. However, the increasing availability of molecular data creates opportunities for the development of mechanistic models that can clarify how selection and developmental architecture interact to direct the evolution of sex-determination genes. PMID:24993578

  11. Nearest pattern interaction and global pattern formation

    NASA Astrophysics Data System (ADS)

    Jeong, Seong-Ok; Moon, Hie-Tae; Ko, Tae-Wook

    2000-12-01

    We studied the effect of nearest pattern interaction on a global pattern formation in a two-dimensional space, where patterns are to grow initially from a noise in the presence of a periodic supply of energy. Although our approach is general, we found that this study is relevant in particular to the pattern formation on a periodically vibrated granular layer, as it gives a unified perspective of the experimentally observed pattern dynamics such as oscillon and stripe formations, skew-varicose and crossroll instabilities, and also a kink formation and decoration.

  12. Patterns of cortical activity during the observation of Public Service Announcements and commercial advertisings.

    PubMed

    Vecchiato, Giovanni; Astolfi, Laura; Cincotti, Febo; De Vico Fallani, Fabrizio; Sorrentino, Domenica M; Mattia, Donatella; Salinari, Serenella; Bianchi, Luigi; Toppi, Jlena; Aloise, Fabio; Babiloni, Fabio

    2010-06-03

    In the present research we were interested to study the cerebral activity of a group of healthy subjects during the observation a documentary intermingled by a series of TV advertisements. In particular, we desired to examine whether Public Service Announcements (PSAs) are able to elicit a different pattern of activity, when compared with a different class of commercials, and correlate it with the memorization of the showed stimuli, as resulted from a following subject's verbal interview. We recorded the EEG signals from a group of 15 healthy subjects and applied the High Resolution EEG techniques in order to estimate and map their Power Spectral Density (PSD) on a realistic cortical model. The single subjects' activities have been z-score transformed and then grouped to define four different datasets, related to subjects who remembered and forgotten the PSAs and to subjects who remembered and forgotten cars commercials (CAR) respectively, which we contrasted to investigate cortical areas involved in this encoding process. The results we here present show that the cortical activity elicited during the observation of the TV commercials that were remembered (RMB) is higher and localized in the left frontal brain areas when compared to the activity elicited during the vision of the TV commercials that were forgotten (FRG) in theta and gamma bands for both categories of advertisements (PSAs and CAR). Moreover, the cortical maps associated with the PSAs also show an increase of activity in the alpha and beta band. In conclusion, the TV advertisements that will be remembered by the experimental population have increased their cerebral activity, mainly in the left hemisphere. These results seem to be congruent with and well inserted in the already existing literature, on this topic, related to the HERA model. The different pattern of activity in different frequency bands elicited by the observation of PSAs may be justified by the existence of additional cortical networks

  13. Temperature-dependent sex determination in fish revisited: prevalence, a single sex ratio response pattern, and possible effects of climate change.

    PubMed

    Ospina-Alvarez, Natalia; Piferrer, Francesc

    2008-07-30

    In gonochoristic vertebrates, sex determination mechanisms can be classified as genotypic (GSD) or temperature-dependent (TSD). Some cases of TSD in fish have been questioned, but the prevalent view is that TSD is very common in this group of animals, with three different response patterns to temperature. We analyzed field and laboratory data for the 59 fish species where TSD has been explicitly or implicitly claimed so far. For each species, we compiled data on the presence or absence of sex chromosomes and determined if the sex ratio response was obtained within temperatures that the species experiences in the wild. If so, we studied whether this response was statistically significant. We found evidence that many cases of observed sex ratio shifts in response to temperature reveal thermal alterations of an otherwise predominately GSD mechanism rather than the presence of TSD. We also show that in those fish species that actually have TSD, sex ratio response to increasing temperatures invariably results in highly male-biased sex ratios, and that even small changes of just 1-2 degrees C can significantly alter the sex ratio from 1:1 (males:females) up to 3:1 in both freshwater and marine species. We demonstrate that TSD in fish is far less widespread than currently believed, suggesting that TSD is clearly the exception in fish sex determination. Further, species with TSD exhibit only one general sex ratio response pattern to temperature. However, the viability of some fish populations with TSD can be compromised through alterations in their sex ratios as a response to temperature fluctuations of the magnitude predicted by climate change.

  14. The Analysis Performance Method Naive Bayes Andssvm Determine Pattern Groups of Disease

    NASA Astrophysics Data System (ADS)

    Sitanggang, Rianto; Tulus; Situmorang, Zakarias

    2017-12-01

    Information is a very important element and into the daily needs of the moment, to get a precise and accurate information is not easy, this research can help decision makers and make a comparison. Researchers perform data mining techniques to analyze the performance of methods and algorithms naïve Bayes methods Smooth Support Vector Machine (ssvm) in the grouping of the disease.The pattern of disease that is often suffered by people in the group can be in the detection area of the collection of information contained in the medical record. Medical records have infromasi disease by patients in coded according to standard WHO. Processing of medical record data to find patterns of this group of diseases that often occur in this community take the attribute address, sex, type of disease, and age. Determining the next analysis is grouping of four ersebut attribute. From the results of research conducted on the dataset fever diabete mellitus, naïve Bayes method produces an average value of 99% and an accuracy and SSVM method produces an average value of 93% accuracy

  15. Disease proportions and drug prescribing pattern observed in a free health camp organized at Dhorphirdi Village Development Committee of Western Nepal.

    PubMed

    Thapa, Raj Kumar; Thapa, Parbati; Parajuli-Baral, Kalpana; Khan, Gulam Muhammad

    2015-09-29

    Health camp is generally organized to provide health care services to the people deprived of health care facilities. The aim of this project was to assess the proportions of disease among attendees of health camp and study the drug prescribing pattern in a free health camp. A case study was performed from 1 day health camp to determine the proportions of disease and drug prescribing pattern. Data collection was performed using log book maintained in the health camp and patient's demographic details, disease diagnosed and drug prescribed was obtained from same log book. A total of 317 patients were included in the study. The majority of the patients were in the range of 41-50 years. On the basis of study on ethnicity, Brahmins and Chettris, were found to be predominant ethnic groups with gastrointestinal disorders as the major disease. The total number of medications prescribed was 510, with non-steroidal anti-inflammatory drugs (NSAIDs) and antipeptic ulcer drugs being commonly prescribed. The average number of drugs per prescription and the percentage of antibiotics prescribed were 1.6 and 21.4%, respectively. It was observed that 96.8% of prescription was by generic names. Likewise, 100% of prescription included drugs from essential drug list. Majority of the patients were of working age group. Headache and fever were found to be the most prevalent cases and NSAIDs were the most commonly prescribed medications. The drug prescribing pattern of the free health camp complied with WHO recommended prescribing indicators.

  16. Cultural patterns in children's learning through keen observation and participation in their communities.

    PubMed

    Correa-Chávez, Maricela; Roberts, Amy L D; Pérez, Margarita Martínez

    2011-01-01

    This chapter examines children's learning through careful attention and participation in the ongoing activities of their community. This form of learning, which has been called learning through Intent Community Participation, seems to be especially common in Mesoamerican Indigenous communities. In these communities, children are integrated into the everyday work and lives of adults and their learning may not be the central focus. We contrast this pattern with that of middle-class European American communities where children are segregated from the primary adult functions of the community. In middle-class communities and schools, children are often encouraged to engage in abstract lessons where their attention is explicitly directed to specific events. In contrast, learning through keen attention and observation may rely on learning through attention to instructions not specifically directed to the learner. Studies demonstrate Mesoamerican Indigenous children's ability to learn through simultaneous and open attention to overheard or observed activities. This form of learning is supported through multiple modalities of communication and interaction. Motivation to learn stems from the learner's inclusion into the major activities and goals of the community. Implications of research and future directions for the study of learning through keen observation are discussed.

  17. Pattern changes in determinants of Chinese emissions

    NASA Astrophysics Data System (ADS)

    Mi, Zhifu; Meng, Jing; Guan, Dabo; Shan, Yuli; Liu, Zhu; Wang, Yutao; Feng, Kuishuang; Wei, Yi-Ming

    2017-07-01

    The Chinese economy has been recovering slowly from the global financial crisis, but it cannot achieve the same rapid development of the pre-recession period. Instead, the country has entered a new phase of economic development—a ‘new normal’. We use a structural decomposition analysis and environmental input-output analysis to estimate the determinants of China’s carbon emission changes during 2005-2012. China’s imports are linked to a global multi-regional input-output model based on the Global Trade and Analysis Project database to calculate the embodied CO2 emissions in imports. We find that the global financial crisis has affected the drivers of China’s carbon emission growth. From 2007 to 2010, the CO2 emissions induced by China’s exports dropped, whereas emissions induced by capital formation grew rapidly. In the ‘new normal’, the strongest factors that offset CO2 emissions have shifted from efficiency gains to structural upgrading. Efficiency was the strongest factor offsetting China’s CO2 emissions before 2010 but drove a 1.4% increase in emissions in the period 2010-2012. By contrast, production structure and consumption patterns caused a 2.6% and 1.3% decrease, respectively, in China’s carbon emissions from 2010 to 2012. In addition, China tends to shift gradually from an investment to a consumption-driven economy. The proportion of CO2 emissions induced by consumption had a declining trend before 2010 but grew from 28.6%-29.1% during 2010-2012.

  18. Design, application and testing of the Work Observation Method by Activity Timing (WOMBAT) to measure clinicians' patterns of work and communication.

    PubMed

    Westbrook, Johanna I; Ampt, Amanda

    2009-04-01

    Evidence regarding how health information technologies influence clinicians' patterns of work and support efficient practices is limited. Traditional paper-based data collection methods are unable to capture clinical work complexity and communication patterns. The use of electronic data collection tools for such studies is emerging yet is rarely assessed for reliability or validity. Our aim was to design, apply and test an observational method which incorporated the use of an electronic data collection tool for work measurement studies which would allow efficient, accurate and reliable data collection, and capture greater degrees of work complexity than current approaches. We developed an observational method and software for personal digital assistants (PDAs) which captures multiple dimensions of clinicians' work tasks, namely what task, with whom, and with what; tasks conducted in parallel (multi-tasking); interruptions and task duration. During field-testing over 7 months across four hospital wards, fifty-two nurses were observed for 250 h. Inter-rater reliability was tested and validity was measured by (i) assessing whether observational data reflected known differences in clinical role work tasks and (ii) by comparing observational data with participants' estimates of their task time distribution. Observers took 15-20 h of training to master the method and data collection process. Only 1% of tasks observed did not match the classification developed and were classified as 'other'. Inter-rater reliability scores of observers were maintained at over 85%. The results discriminated between the work patterns of enrolled and registered nurses consistent with differences in their roles. Survey data (n=27) revealed consistent ratings of tasks by nurses, and their rankings of most to least time-consuming tasks were significantly correlated with those derived from the observational data. Over 40% of nurses' time was spent in direct care or professional communication

  19. Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally

    PubMed Central

    Ramirez, Kelly S.; Leff, Jonathan W.; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W.; Kelly, Eugene F.; Oldfield, Emily E.; Shaw, E. Ashley; Steenbock, Christopher; Bradford, Mark A.; Wall, Diana H.; Fierer, Noah

    2014-01-01

    Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. PMID:25274366

  20. Wind-Induced Air-Flow Patterns in an Urban Setting: Observations and Numerical Modeling

    NASA Astrophysics Data System (ADS)

    Sattar, Ahmed M. A.; Elhakeem, Mohamed; Gerges, Bishoy N.; Gharabaghi, Bahram; Gultepe, Ismail

    2018-04-01

    City planning can have a significant effect on wind flow velocity patterns and thus natural ventilation. Buildings with different heights are roughness elements that can affect the near- and far-field wind flow velocity. This paper aims at investigating the impact of an increase in building height on the nearby velocity fields. A prototype urban setting of buildings with two different heights (25 and 62.5 cm) is built up and placed in a wind tunnel. Wind flow velocity around the buildings is mapped at different heights. Wind tunnel measurements are used to validate a 3D-numerical Reynolds averaged Naviers-Stokes model. The validated model is further used to calculate the wind flow velocity patterns for cases with different building heights. It was found that increasing the height of some buildings in an urban setting can lead to the formation of large horseshoe vortices and eddies around building corners. A separation area is formed at the leeward side of the building, and the recirculation of air behind the building leads to the formation of slow rotation vortices. The opposite effect is observed in the wake (cavity) region of the buildings, where both the cavity length and width are significantly reduced, and this resulted in a pronounced increase in the wind flow velocity. A significant increase in the wind flow velocity in the wake region of tall buildings with a value of up to 30% is observed. The spatially averaged velocities around short buildings also increased by 25% compared to those around buildings with different heights. The increase in the height of some buildings is found to have a positive effect on the wind ventilation at the pedestrian level.

  1. Identifying patterns of item missing survey data using latent groups: an observational study.

    PubMed

    Barnett, Adrian G; McElwee, Paul; Nathan, Andrea; Burton, Nicola W; Turrell, Gavin

    2017-10-30

    To examine whether respondents to a survey of health and physical activity and potential determinants could be grouped according to the questions they missed, known as 'item missing'. Observational study of longitudinal data. Residents of Brisbane, Australia. 6901 people aged 40-65 years in 2007. We used a latent class model with a mixture of multinomial distributions and chose the number of classes using the Bayesian information criterion. We used logistic regression to examine if participants' characteristics were associated with their modal latent class. We used logistic regression to examine whether the amount of item missing in a survey predicted wave missing in the following survey. Four per cent of participants missed almost one-fifth of the questions, and this group missed more questions in the middle of the survey. Eighty-three per cent of participants completed almost every question, but had a relatively high missing probability for a question on sleep time, a question which had an inconsistent presentation compared with the rest of the survey. Participants who completed almost every question were generally younger and more educated. Participants who completed more questions were less likely to miss the next longitudinal wave. Examining patterns in item missing data has improved our understanding of how missing data were generated and has informed future survey design to help reduce missing data. © Article author(s) (or their employer(s) unless otherwise stated in the text of the article) 2017. All rights reserved. No commercial use is permitted unless otherwise expressly granted.

  2. Seasonal Differences in Determinants of Time Location Patterns in an Urban Population: A Large Population-Based Study in Korea.

    PubMed

    Lee, Sewon; Lee, Kiyoung

    2017-06-22

    Time location patterns are a significant factor for exposure assessment models of air pollutants. Factors associated with time location patterns in urban populations are typically due to high air pollution levels in urban areas. The objective of this study was to determine the seasonal differences in time location patterns in two urban cities. A Time Use Survey of Korean Statistics (KOSTAT) was conducted in the summer, fall, and winter of 2014. Time location data from Seoul and Busan were collected, together with demographic information obtained by diaries and questionnaires. Determinants of the time spent at each location were analyzed by multiple linear regression and the stepwise method. Seoul and Busan participants had similar time location profiles over the three seasons. The time spent at own home, other locations, workplace/school and during walk were similar over the three seasons in both the Seoul and Busan participants. The most significant time location pattern factors were employment status, age, gender, monthly income, and spouse. Season affected the time spent at the workplace/school and other locations in the Seoul participants, but not in the Busan participants. The seasons affected each time location pattern of the urban population slightly differently, but overall there were few differences.

  3. Characteristics of atmospheric circulation patterns associated with extreme temperatures over North America in observations and climate models

    NASA Astrophysics Data System (ADS)

    Loikith, Paul C.

    associated with extreme temperature days in most places. Model-simulated patterns tend to resemble observed patterns better in the winter than the summer and at 500 hPa than at the surface. There is substantial variability among the suite of models analyzed and most models simulate circulation patterns more realistically away from influential features such as large bodies of water and complex topography.

  4. Generation and use of observational data patterns in the evaluation of data quality for AmeriFlux and FLUXNET

    NASA Astrophysics Data System (ADS)

    Pastorello, G.; Agarwal, D.; Poindexter, C.; Papale, D.; Trotta, C.; Ribeca, A.; Canfora, E.; Faybishenko, B.; Gunter, D.; Chu, H.

    2015-12-01

    presentation, using AmeriFlux fluxes and micrometeorological data, we discuss our approach to creating observational data patterns, and how we are using them to implement new automated checks. We also detail examples of these observational data patterns, illustrating how they are being used.

  5. Extended generalized recurrence plot quantification of complex circular patterns

    NASA Astrophysics Data System (ADS)

    Riedl, Maik; Marwan, Norbert; Kurths, Jürgen

    2017-03-01

    The generalized recurrence plot is a modern tool for quantification of complex spatial patterns. Its application spans the analysis of trabecular bone structures, Turing patterns, turbulent spatial plankton patterns, and fractals. Determinism is a central measure in this framework quantifying the level of regularity of spatial structures. We show by basic examples of fully regular patterns of different symmetries that this measure underestimates the orderliness of circular patterns resulting from rotational symmetries. We overcome this crucial problem by checking additional structural elements of the generalized recurrence plot which is demonstrated with the examples. Furthermore, we show the potential of the extended quantity of determinism applying it to more irregular circular patterns which are generated by the complex Ginzburg-Landau-equation and which can be often observed in real spatially extended dynamical systems. So, we are able to reconstruct the main separations of the system's parameter space analyzing single snapshots of the real part only, in contrast to the use of the original quantity. This ability of the proposed method promises also an improved description of other systems with complicated spatio-temporal dynamics typically occurring in fluid dynamics, climatology, biology, ecology, social sciences, etc.

  6. Exploring the resonant vibration of thin plates: Reconstruction of Chladni patterns and determination of resonant wave numbers.

    PubMed

    Tuan, P H; Wen, C P; Chiang, P Y; Yu, Y T; Liang, H C; Huang, K F; Chen, Y F

    2015-04-01

    The Chladni nodal line patterns and resonant frequencies for a thin plate excited by an electronically controlled mechanical oscillator are experimentally measured. Experimental results reveal that the resonant frequencies can be fairly obtained by means of probing the variation of the effective impedance of the exciter with and without the thin plate. The influence of the extra mass from the central exciter is confirmed to be insignificant in measuring the resonant frequencies of the present system. In the theoretical aspect, the inhomogeneous Helmholtz equation is exploited to derive the response function as a function of the driving wave number for reconstructing experimental Chladni patterns. The resonant wave numbers are theoretically identified with the maximum coupling efficiency as well as the maximum entropy principle. Substituting the theoretical resonant wave numbers into the derived response function, all experimental Chladni patterns can be excellently reconstructed. More importantly, the dispersion relationship for the flexural wave of the vibrating plate can be determined with the experimental resonant frequencies and the theoretical resonant wave numbers. The determined dispersion relationship is confirmed to agree very well with the formula of the Kirchhoff-Love plate theory.

  7. Inflammatory patterns in asthmatic children based on alveolar nitric oxide determination.

    PubMed

    Corcuera-Elosegui, Paula; Sardón-Prado, Olaia; Aldasoro-Ruiz, Ane; Korta-Murua, Javier; Mintegui-Aramburu, Javier; Emparanza-Knorr, José I; Pérez-Yarza, Eduardo G

    2015-06-01

    Nitric oxide (NO) levels can be measured at proximal (maximum airway NO flux [J'aw(NO)]) and distal (alveolar NO concentration [C(ANO)]) levels. Four inflammatory patterns have been described in asthmatic individuals, although their relevance has not been well established. The objective was to determine J'aw(NO) and C(ANO) in order to establish four inflammatory categories in asthmatics. Cross-sectional study of a sample consisting of healthy and asthmatic children. Exhaled NO was determined at multiple flows. J'aw(NO) and C(ANO) were obtained according to the two-compartment model. The asthma control questionnaire (ACQ) and spirometry were administered to asthmatic children. Patients were categorized as type I (normal J'aw(NO) and C(ANO)), type II (elevated J'aw(NO) and normal C(ANO)), type III (elevated J'aw(NO) and C(ANO)) and type IV (normal J'aw(NO) and elevated C(ANO)). Correlation between FE(NO,50), J'aw(NO) and C(ANO) was analyzed using Spearman's R Correlation Test. Analysis of variance and paired comparisons were performed using the Bonferroni correction. One hundred sixty-two children were studied, of whom 49 (32.23%) were healthy controls and 103 (67.76%) asthmatics. In the control subjects, FE(NO,50) (ppb)(median and range) was 11.5 (1.6 to 27.3), J'aw(NO) (pl/s) was 516 (98.3 to 1470) and C(ANO) (ppb) was 2.2 (0.1 to 4.5). Forty-four (42.7%) of the asthmatic participants were categorized as type I, 41 (39.8%) as type II, 14 (13.5%) as type III and 4 (3.88%) as type IV. Good correlation was observed between J'aw(NO) and FE(NO,50) (r=0.97). There was no association between J'aw(NO) and C(ANO). FEV1/FVC decreased significantly in type III (mean 79.8±7.5). Morbidity was significantly higher in types III and IV. Normal values obtained are similar to those previously reported. Asthmatics with high C(ANO) showed higher morbidity. No correlation was found between proximal and distal inflammation. Copyright © 2014 SEPAR. Published by Elsevier Espana. All

  8. Observation of Eye Pattern on Super-Resolution Near-Field Structure Disk with Write-Strategy Technique

    NASA Astrophysics Data System (ADS)

    Fuji, Hiroshi; Kikukawa, Takashi; Tominaga, Junji

    2004-07-01

    Pit-edge recording at a density of 150 nm pits and spaces is carried out on a super-resolution near-field structure (super-RENS) disk with a platinum oxide layer. Pits are recorded and read using a 635-nm-wavelength laser and an objective lens with a 0.6 numerical aperture. We arrange laser pulses to correctly record the pits on the disk by a write-strategy technique. The laser-pulse figure includes a unit time of 0.25 T and intensities of Pw1, Pw2 and Pw3. After recording pits of various lengths, the observation of an eye pattern is achieved despite a pit smaller than the resolution limit. Furthermore, the eye pattern maintains its shape even though other pits fill the adjacent tracks at a track density of 600 nm. The disk can be used as a pit-edge recording system through a write-strategy technique.

  9. On the Bar Pattern Speed Determination of NGC 3367

    NASA Astrophysics Data System (ADS)

    Gabbasov, R. F.; Repetto, P.; Rosado, M.

    2009-09-01

    An important dynamic parameter of barred galaxies is the bar pattern speed, Ω P . Among several methods that are used for the determination of Ω P , the Tremaine-Weinberg method has the advantage of model independence and accuracy. In this work, we apply the method to a simulated bar including gas dynamics and study the effect of two-dimensional spectroscopy data quality on robustness of the method. We added white noise and a Gaussian random field to the data and measured the corresponding errors in Ω P . We found that a signal to noise ratio in surface density ~5 introduces errors of ~20% for the Gaussian noise, while for the white noise the corresponding errors reach ~50%. At the same time, the velocity field is less sensitive to contamination. On the basis of the performed study, we applied the method to the NGC 3367 spiral galaxy using Hα Fabry-Pérot interferometry data. We found Ω P = 43 ± 6 km s-1 kpc-1 for this galaxy.

  10. Network based approaches reveal clustering in protein point patterns

    NASA Astrophysics Data System (ADS)

    Parker, Joshua; Barr, Valarie; Aldridge, Joshua; Samelson, Lawrence E.; Losert, Wolfgang

    2014-03-01

    Recent advances in super-resolution imaging have allowed for the sub-diffraction measurement of the spatial location of proteins on the surfaces of T-cells. The challenge is to connect these complex point patterns to the internal processes and interactions, both protein-protein and protein-membrane. We begin analyzing these patterns by forming a geometric network amongst the proteins and looking at network measures, such the degree distribution. This allows us to compare experimentally observed patterns to models. Specifically, we find that the experimental patterns differ from heterogeneous Poisson processes, highlighting an internal clustering structure. Further work will be to compare our results to simulated protein-protein interactions to determine clustering mechanisms.

  11. Optimal ciliary beating patterns

    NASA Astrophysics Data System (ADS)

    Vilfan, Andrej; Osterman, Natan

    2011-11-01

    We introduce a measure for energetic efficiency of single or collective biological cilia. We define the efficiency of a single cilium as Q2 / P , where Q is the volume flow rate of the pumped fluid and P is the dissipated power. For ciliary arrays, we define it as (ρQ) 2 / (ρP) , with ρ denoting the surface density of cilia. We then numerically determine the optimal beating patterns according to this criterion. For a single cilium optimization leads to curly, somewhat counterintuitive patterns. But when looking at a densely ciliated surface, the optimal patterns become remarkably similar to what is observed in microorganisms like Paramecium. The optimal beating pattern then consists of a fast effective stroke and a slow sweeping recovery stroke. Metachronal waves lead to a significantly higher efficiency than synchronous beating. Efficiency also increases with an increasing density of cilia up to the point where crowding becomes a problem. We finally relate the pumping efficiency of cilia to the swimming efficiency of a spherical microorganism and show that the experimentally estimated efficiency of Paramecium is surprisingly close to the theoretically possible optimum.

  12. Regionalizing Africa: Patterns of Precipitation Variability in Observations and Global Climate Models

    NASA Technical Reports Server (NTRS)

    Badr, Hamada S.; Dezfuli, Amin K.; Zaitchik, Benjamin F.; Peters-Lidard, Christa D.

    2016-01-01

    Many studies have documented dramatic climatic and environmental changes that have affected Africa over different time scales. These studies often raise questions regarding the spatial extent and regional connectivity of changes inferred from observations and proxies and/or derived from climate models. Objective regionalization offers a tool for addressing these questions. To demonstrate this potential, applications of hierarchical climate regionalizations of Africa using observations and GCM historical simulations and future projections are presented. First, Africa is regionalized based on interannual precipitation variability using Climate Hazards Group Infrared Precipitation with Stations (CHIRPS) data for the period 19812014. A number of data processing techniques and clustering algorithms are tested to ensure a robust definition of climate regions. These regionalization results highlight the seasonal and even month-to-month specificity of regional climate associations across the continent, emphasizing the need to consider time of year as well as research question when defining a coherent region for climate analysis. CHIRPS regions are then compared to those of five GCMs for the historic period, with a focus on boreal summer. Results show that some GCMs capture the climatic coherence of the Sahel and associated teleconnections in a manner that is similar to observations, while other models break the Sahel into uncorrelated subregions or produce a Sahel-like region of variability that is spatially displaced from observations. Finally, shifts in climate regions under projected twenty-first-century climate change for different GCMs and emissions pathways are examined. A projected change is found in the coherence of the Sahel, in which the western and eastern Sahel become distinct regions with different teleconnections. This pattern is most pronounced in high-emissions scenarios.

  13. Comparison of drug utilization patterns in observational data: antiepileptic drugs in pediatric patients

    PubMed Central

    Bourgeois, Florence T; Olson, Karen L; Poduri, Annapurna; Mandl, Kenneth D

    2015-01-01

    Purpose Physicians require information on the comparative benefits and harms of medications for optimal treatment decisions. However, this type of data is limited, especially for pediatric patients. Objective Our aim was to use observational data to measure and compare medication utilization patterns in a pediatric patient population. Methods Using pharmacy claims data from a large, national-scale insurance program in the US, we identified all patients with a diagnosis of epilepsy treated with a first-generation (carabamazepine, ethosuximide, phenobarbital, phenytoin, valproate) or second-generation (carbamazepine XR, gabapentin, lamotrigine, levetiracetam, oxcarbazepine, tiagabine, topiramate, valproate XR, zonisamide) antiepileptic drug. Treatment periods were defined based on prescription fill dates and medication days supplied. Medication use was measured for individual antiepileptic drugs and for first-generation and second-generation drugs as groups. Results There were 2527 (54%) patients who initiated therapy with first-generation and 2139 (46%) with second-generation antiepileptics. First- and second-generation drugs had the same one-year retention rates (26% [95%CI 24–28] and 26% [95%CI 25–28], respectively). A total of 26% (95%CI 25–28) and 29% (95%CI 27–31) of patients who started on a first- or second-generation antiepileptic medication, respectively, resumed treatment with the initial drug after discontinuation. Overall, 73% (95%CI 71–74) of patients were treated with only one antiepileptic drug, with similar rates for patients started on first- and second-generation drugs (71% [95%CI 69–73] vs 74% [95%CI 72–76]). Conclusions Comparing drug utilization patterns in a pediatric population using observational data, we found similar rates of retention and therapeutic changes. These findings are consistent with available comparative data and demonstrate an approach that could be extended to other drug classes and conditions in pediatric

  14. Comparison of Drug Utilization Patterns in Observational Data: Antiepileptic Drugs in Pediatric Patients.

    PubMed

    Bourgeois, Florence T; Olson, Karen L; Poduri, Annapurna; Mandl, Kenneth D

    2015-10-01

    Physicians require information on the comparative benefits and harms of medications for optimal treatment decisions. However, this type of data is limited, especially for pediatric patients. Our aim was to use observational data to measure and compare medication utilization patterns in a pediatric patient population. Using pharmacy claims data from a large, national-scale insurance program in the USA, we identified all patients with a diagnosis of epilepsy treated with a first-generation antiepileptic drug (carbamazepine, ethosuximide, phenobarbital, phenytoin, or valproate) or a second-generation antiepileptic drug [carbamazepine extended release (XR), gabapentin, lamotrigine, levetiracetam, oxcarbazepine, tiagabine, topiramate, valproate XR, or zonisamide]. Treatment periods were defined on the basis of prescription fill dates and medication days supplied. Medication use was measured for individual antiepileptic drugs and for first-generation and second-generation drugs as groups. There were 2527 patients (54 %) who initiated therapy with first-generation antiepileptics and 2139 patients (46 %) who initiated therapy with second-generation antiepileptics. First- and second-generation drugs had the same 1-year retention rates [26 % (95 % confidence interval (CI) 24-28) and 26 % (95 % CI 25-28), respectively], and 26 % of patients (95 % CI 25-28) and 29 % of patients (95 % CI 27-31) who started on a first- or second-generation antiepileptic medication, respectively, resumed treatment with the initial drug after discontinuation. Overall, 73 % of patients (95 % CI 71-74) were treated with only one antiepileptic drug, with similar rates for patients started on first- and second-generation drugs [71 % (95 % CI 69-73) versus 74 % (95 % CI 72-76)]. Comparing drug utilization patterns in a pediatric population using observational data, we found similar rates of retention and therapeutic changes. These findings are consistent with the available comparative data and

  15. Determination of the top quark mass from leptonic observables

    NASA Astrophysics Data System (ADS)

    Frixione, Stefano; Mitov, Alexander

    2014-09-01

    We present a procedure for the determination of the mass of the top quark at the LHC based on leptonic observables in dilepton events. Our approach utilises the shapes of kinematic distributions through their few lowest Mellin moments; it is notable for its minimal sensitivity to the modelling of long-distance effects, for not requiring the reconstruction of top quarks, and for having a competitive precision, with theory errors on the extracted top mass of the order of 0.8 GeV. A novel aspect of our work is the study of theoretical biases that might influence in a dramatic way the determination of the top mass, and which are potentially relevant to all template-based methods. We propose a comprehensive strategy that helps minimise the impact of such biases, and leads to a reliable top mass extraction at hadron colliders.

  16. Investigating the anticipatory nature of pattern perception in sport.

    PubMed

    Gorman, Adam D; Abernethy, Bruce; Farrow, Damian

    2011-07-01

    The aim of the present study was to examine the anticipatory nature of pattern perception in sport by using static and moving basketball patterns across three different display types. Participants of differing skill levels were included in order to determine whether the effects would be moderated by the knowledge and experience of the observer in the same manner reported previously for simple images. The results from a pattern recognition task showed that both expert and recreational participants were more likely to anticipate the next likely state of a pattern when it was presented as a moving video, but only the experts appeared to have the depth of understanding required to elicit the same anticipatory encoding for patterns presented as schematic images. The results extend those reported in previous research and provide further evidence of an anticipatory encoding in pattern perception for images containing complex, interrelated patterns.

  17. Patterns of Antimicrobial Resistance Observed in Escherichia coli Isolates Obtained from Domestic- and Wild-Animal Fecal Samples, Human Septage, and Surface Water

    PubMed Central

    Sayah, Raida S.; Kaneene, John B.; Johnson, Yvette; Miller, RoseAnn

    2005-01-01

    A repeated cross-sectional study was conducted to determine the patterns of antimicrobial resistance in 1,286 Escherichia coli strains isolated from human septage, wildlife, domestic animals, farm environments, and surface water in the Red Cedar watershed in Michigan. Isolation and identification of E. coli were done by using enrichment media, selective media, and biochemical tests. Antimicrobial susceptibility testing by the disk diffusion method was conducted for neomycin, gentamicin, streptomycin, chloramphenicol, ofloxacin, trimethoprim-sulfamethoxazole, tetracycline, ampicillin, nalidixic acid, nitrofurantoin, cephalothin, and sulfisoxazole. Resistance to at least one antimicrobial agent was demonstrated in isolates from livestock, companion animals, human septage, wildlife, and surface water. In general, E. coli isolates from domestic species showed resistance to the largest number of antimicrobial agents compared to isolates from human septage, wildlife, and surface water. The agents to which resistance was demonstrated most frequently were tetracycline, cephalothin, sulfisoxazole, and streptomycin. There were similarities in the patterns of resistance in fecal samples and farm environment samples by animal, and the levels of cephalothin-resistant isolates were higher in farm environment samples than in fecal samples. Multidrug resistance was seen in a variety of sources, and the highest levels of multidrug-resistant E. coli were observed for swine fecal samples. The fact that water sample isolates were resistant only to cephalothin may suggest that the resistance patterns for farm environment samples may be more representative of the risk of contamination of surface waters with antimicrobial agent-resistant bacteria. PMID:15746342

  18. T cell source of type 1 cytokines determines illness patterns in respiratory syncytial virus-infected mice.

    PubMed Central

    Tang, Y. W.; Graham, B. S.

    1997-01-01

    Manipulation of the cytokine microenvironment at the time of vaccination can influence immune responses to remote challenge, providing a strategy to study the molecular pathogenesis of respiratory syncytial virus (RSV) vaccine-enhanced disease in the mouse model. Although treatment with antibody against IL-4 or recombinant IL-12 (rIL-12) at the time of formalin-inactivated RSV vaccination induced a similar shift in the pattern of cytokine mRNA expression upon live virus challenge, anti-IL-4 treated mice had increased CD8+ cytotoxic T lymphocyte activity and reduced illness compared with rIL-12-treated mice. To define effector mechanisms responsible for these patterns, CD4+ and/or CD8+ T lymphocytes were selectively depleted in vivo at the time of RSV challenge. In rIL-12-treated mice, CD4+ lymphocytes made the largest contribution to IFN-gamma mRNA, RSV clearance, and illness, while in anti-IL-4 treated mice, CD8+ lymphocytes were the major effector. The effector responsible for virus clearance also mediated illness, suggesting that efficiency of virus clearance determined disease expression. These results demonstrate that the phenotype of effector cells involved in the immune response to virus challenge may be a more important determinant of disease than patterns of cytokine expression classically assigned to Th1 and Th2 lymphocytes. PMID:9151790

  19. Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

    PubMed

    Ramirez, Kelly S; Leff, Jonathan W; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W; Kelly, Eugene F; Oldfield, Emily E; Shaw, E Ashley; Steenbock, Christopher; Bradford, Mark A; Wall, Diana H; Fierer, Noah

    2014-11-22

    Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

  20. Recovery patterns, histological observations and genetic integrity in Malus shoot tips cryopreserved using droplet vitrification and encapsulation-dehydration procedures

    USDA-ARS?s Scientific Manuscript database

    A droplet-vitrification procedure is described for cryopreservation of Malus shoot tips. Survival patterns, recovery types, histological observations, and genetic integrity were compared for Malus shoot tips cryopreserved using this droplet-vitrification procedure and an encapsulation-dehydration pr...

  1. Measuring rural allied health workforce turnover and retention: what are the patterns, determinants and costs?

    PubMed

    Chisholm, Marita; Russell, Deborah; Humphreys, John

    2011-04-01

    To measure variations in patterns of turnover and retention, determinants of turnover, and costs of recruitment of allied health professionals in rural areas. Data were collected on health service characteristics, recruitment costs and de-identified individual-level employment entry and exit data for dietitians, occupational therapists, physiotherapists, podiatrists, psychologists, social workers and speech pathologists employed between 1 January 2004 and 31 December 2009. Health services providing allied health services within Western Victoria were stratified by geographical location and town size. Eighteen health services were sampled, 11 participated. Annual turnover rates, stability rates, median length of stay in current position, survival probabilities, turnover hazards and median costs of recruitment were calculated. Analysis of commencement and exit data from 901 allied health professionals indicated that differences in crude workforce patterns according to geographical location emerge 12 to 24 months after commencement of employment, although the results were not statistically significant. Proportional hazards modelling indicated profession and employee age and grade upon commencement were significant determinants of turnover risk. Costs of replacing allied health workers are high. An opportunity for implementing comprehensive retention strategies exists in the first year of employment in rural and remote settings. Benchmarks to guide workforce retention strategies should take account of differences in patterns of allied health turnover and retention according to geographical location. Monitoring allied health workforce turnover and retention through analysis of routinely collected data to calculate selected indicators provides a stronger evidence base to underpin workforce planning by health services and regional authorities. © 2011 The Authors. Australian Journal of Rural Health © National Rural Health Alliance Inc.

  2. The Pattern Glare Test: a review and determination of normative values.

    PubMed

    Evans, B J W; Stevenson, S J

    2008-07-01

    Pattern glare is characterised by symptoms of visual perceptual distortions and visual stress on viewing striped patterns. People with migraine or Meares-Irlen syndrome (visual stress) are especially prone to pattern glare. The literature on pattern glare is reviewed, and the goal of this study was to develop clinical norms for the Wilkins and Evans Pattern Glare Test. This comprises three test plates of square wave patterns of spatial frequency 0.5, 3 and 12 cycles per degree (cpd). Patients are shown the 0.5 cpd grating and the number of distortions that are reported in response to a list of questions is recorded. This is repeated for the other patterns. People who are prone to pattern glare experience visual perceptual distortions on viewing the 3 cpd grating, and pattern glare can be quantified as either the sum of distortions reported with the 3 cpd pattern or as the difference between the number of distortions with the 3 and 12 cpd gratings, the '3-12 cpd difference'. In study 1, 100 patients consulting an optometrist performed the Pattern Glare Test and the 95th percentile of responses was calculated as the limit of the normal range. The normal range for the number of distortions was found to be <4 on the 3 cpd grating and <2 for the 3-12 cpd difference. Pattern glare was similar in both genders but decreased with age. In study 2, 30 additional participants were given the test in the reverse of the usual testing order and were compared with a sub-group from study 1, matched for age and gender. Participants experienced more distortions with the 12 cpd grating if it was presented after the 3 cpd grating. However, the order did not influence the two key measures of pattern glare. In study 3, 30 further participants who reported a medical diagnosis of migraine were compared with a sub-group of the participants in study 1 who did not report migraine or frequent headaches, matched for age and gender. The migraine group reported more symptoms on viewing all

  3. Observing temporal patterns of vertical flux through streambed sediments using time-series analysis of temperature records

    NASA Astrophysics Data System (ADS)

    Lautz, Laura K.

    2012-09-01

    SummaryRates of water exchange between surface water and groundwater (SW-GW) can be highly variable over time due to temporal changes in streambed hydraulic conductivity, storm events, and oscillation of stage due to natural and regulated river flow. There are few effective field methods available to make continuous measurements of SW-GW exchange rates with the temporal resolution required in many field applications. Here, controlled laboratory experiments were used to explore the accuracy of analytical solutions to the one-dimensional heat transport model for capturing temporal variability of flux through porous media from propagation of a periodic temperature signal to depth. Column experiments were used to generate one-dimensional flow of water and heat through saturated sand with a quasi-sinusoidal temperature oscillation at the upstream boundary. Measured flux rates through the column were compared to modeled flux rates derived using the computer model VFLUX and the amplitude ratio between filtered temperature records from two depths in the column. Imposed temporal changes in water flux through the column were designed to replicate observed patterns of flux in the field, derived using the same methodology. Field observations of temporal changes in flux were made over multiple days during a large-scale storm event and diurnally during seasonal baseflow recession. Temporal changes in flux that occur gradually over days, sub-daily, and instantaneously in time can be accurately measured using the one-dimensional heat transport model, although those temporal changes may be slightly smoothed over time. Filtering methods effectively isolate the time-variable amplitude and phase of the periodic temperature signal, effectively eliminating artificial temporal flux patterns otherwise imposed by perturbations of the temperature signal, which result from typical weather patterns during field investigations. Although previous studies have indicated that sub

  4. Turing patterns in parabolic systems of conservation laws and numerically observed stability of periodic waves

    NASA Astrophysics Data System (ADS)

    Barker, Blake; Jung, Soyeun; Zumbrun, Kevin

    2018-03-01

    Turing patterns on unbounded domains have been widely studied in systems of reaction-diffusion equations. However, up to now, they have not been studied for systems of conservation laws. Here, we (i) derive conditions for Turing instability in conservation laws and (ii) use these conditions to find families of periodic solutions bifurcating from uniform states, numerically continuing these families into the large-amplitude regime. For the examples studied, numerical stability analysis suggests that stable periodic waves can emerge either from supercritical Turing bifurcations or, via secondary bifurcation as amplitude is increased, from subcritical Turing bifurcations. This answers in the affirmative a question of Oh-Zumbrun whether stable periodic solutions of conservation laws can occur. Determination of a full small-amplitude stability diagram - specifically, determination of rigorous Eckhaus-type stability conditions - remains an interesting open problem.

  5. Determination of wood grain direction from laser light scattering pattern

    NASA Astrophysics Data System (ADS)

    Simonaho, Simo-Pekka; Palviainen, Jari; Tolonen, Yrjö; Silvennoinen, Raimo

    2004-01-01

    Laser light scattering patterns from the grains of wood are investigated in detail to gain information about the characteristics of scattering patterns related to the direction of the grains. For this purpose, wood samples of Scots pine ( Pinus sylvestris L.) and silver birch ( Betula pubescens) were investigated. The orientation and shape of the scattering pattern of laser light in wood was found to correlate well with the direction of grain angles in a three-dimensional domain. The proposed method was also experimentally verified.

  6. Determinants of Low Cloud Properties - An Artificial Neural Network Approach Using Observation Data Sets

    NASA Astrophysics Data System (ADS)

    Andersen, Hendrik; Cermak, Jan

    2015-04-01

    This contribution studies the determinants of low cloud properties based on the application of various global observation data sets in machine learning algorithms. Clouds play a crucial role in the climate system as their radiative properties and precipitation patterns significantly impact the Earth's energy balance. Cloud properties are determined by environmental conditions, as cloud formation requires the availability of water vapour ("precipitable water") and condensation nuclei in sufficiently saturated conditions. A main challenge in the research of aerosol-cloud interactions is the separation of aerosol effects from meteorological influence. To gain understanding of the processes that govern low cloud properties in order to increase accuracy of climate models and predictions of future changes in the climate system is thus of great importance. In this study, artificial neural networks are used to relate a selection of predictors (meteorological parameters, aerosol loading) to a set of predictands (cloud microphysical and optical properties). As meteorological parameters, wind direction and velocity, sea level pressure, static stability of the lower troposphere, atmospheric water vapour and temperature at the surface are used (re-analysis data by the European Centre for Medium-Range Weather Forecasts). In addition to meteorological conditions, aerosol loading is used as a predictor of cloud properties (MODIS collection 6 aerosol optical depth). The statistical model reveals significant relationships between predictors and predictands and is able to represent the aerosol-cloud-meteorology system better than frequently used bivariate relationships. The most important predictors can be identified by the additional error when excluding one predictor at a time. The sensitivity of each predictand to each of the predictors is analyzed.

  7. Local pharmacological effects of tungstate on the color-pattern determination of butterfly wings: a possible relationship between the eyespot and parafocal element.

    PubMed

    Dhungel, Bidur; Otaki, Joji M

    2009-11-01

    Butterfly wing color patterns can be changed by the application of a temperature shock or pharmacological agents such as tungstate, producing a distinctive type of elemental modification called the TS (temperature shock) type. Heterochronic uncoupling between the signaling and reception steps during the color-pattern determination process has been proposed as a mechanism for TS-type changes. As an extension of this hypothesis, both the parafocal element (PFE) and the eyespot in the same wing compartment are considered to be determined by morphogenic signal(s) emitted from the same eyespot focus. However, these models need to be examined with additional experimental data. Furthermore, there is controversy as to whether the action of tungstate on wing color patterns is direct or Indirect. Using a species of nymphalid butterfly (Junonia orithya), we have devised a simple method for the local application of pharmacological agents directly on developing wings of pupae. Local tungstate application resulted in reduced eyespots and circular dislocated PFEs in the eyespot-less compartments only on the treated wing, demonstrating that tungstate directly induces color-pattern changes on wings. We further examined the eyespot-PFE relationship in normal and cold-shocked Individuals, showing that an eyespot can be superimposed on a PFE and vice versa, probably depending on the timing of their fate determination. Taken together, we propose a two-morphogen model for the normal color-pattern determination, in which the morphogenic signals for the eyespot and PFE are different from each other despite their Identical origin. This two-morphogen model is compatible with the heterochronic uncoupling model for TS-type changes.

  8. Genetic Determinants of Epigenetic Patterns: Providing Insight into Disease.

    PubMed

    Cazaly, Emma; Charlesworth, Jac; Dickinson, Joanne L; Holloway, Adele F

    2015-03-26

    The field of epigenetics and our understanding of the mechanisms that regulate the establishment, maintenance and heritability of epigenetic patterns continue to grow at a remarkable rate. This information is providing increased understanding of the role of epigenetic changes in disease, insight into the underlying causes of these epigenetic changes and revealing new avenues for therapeutic intervention. Epigenetic modifiers are increasingly being pursued as therapeutic targets in a range of diseases, with a number of agents targeting epigenetic modifications already proving effective in diseases such as cancer. Although it is well established that DNA mutations and aberrant expression of epigenetic modifiers play a key role in disease, attention is now turning to the interplay between genetic and epigenetic factors in complex disease etiology. The role of genetic variability in determining epigenetic profiles, which can then be modified by environmental and stochastic factors, is becoming more apparent. Understanding the interplay between genetic and epigenetic factors is likely to aid in identifying individuals most likely to benefit from epigenetic therapies. This goal is coming closer to realization because of continual advances in laboratory and statistical tools enabling improvements in the integration of genomic, epigenomic and phenotypic data.

  9. Functional significance of the pattern of renal sympathetic nerve activation.

    PubMed

    Dibona, G F; Sawin, L L

    1999-08-01

    To assess the renal functional significance of the pattern of renal sympathetic nerve activation, computer-generated stimulus patterns (delivered at constant integrated voltage) were applied to the decentralized renal sympathetic nerve bundle and renal hemodynamic and excretory responses determined in anesthetized rats. When delivered at the same integrated voltage, stimulus patterns resembling those observed in in vivo multifiber recordings of renal sympathetic nerve activity (diamond-wave patterns) produced greater renal vasoconstrictor responses than conventional square-wave patterns. Within diamond-wave patterns, increasing integrated voltage by increasing amplitude produced twofold greater renal vasoconstrictor responses than by increasing duration. With similar integrated voltages that were subthreshold for renal vasoconstriction, neither diamond- nor square-wave pattern altered glomerular filtration rate, whereas diamond- but not square-wave pattern reversibly decreased urinary sodium excretion by 25 +/- 3%. At the same number of pulses per second, intermittent stimulation produced faster and greater renal vasoconstriction than continuous stimulation. At the same number of pulses per second, increases in rest period during intermittent stimulation proportionally augmented the renal vasoconstrictor response compared with that observed with continuous stimulation; the maximum augmentation of 55% occurred at a rest period of 500 ms. These results indicate that the pattern of renal sympathetic nerve stimulation (activity) significantly influences the rapidity, magnitude, and selectivity of the renal vascular and tubular responses.

  10. UP-HILIC-MS/MS to Determine the Action Pattern of Penicillium sp. Dextranase.

    PubMed

    Yi, Lin; Sun, Xue; Du, Kenze; Ouyang, Yilan; Wu, Chengling; Xu, Naiyu; Linhardt, Robert J; Zhang, Zhenqing

    2015-07-01

    Investigation of the action pattern of enzymes acting on carbohydrates is challenging, as both the substrate and the digestion products are complex mixtures. Dextran and its enzyme-derived oligosaccharides are widely used for many industrial applications. In this work, a new method relying on ultra-performance hydrophilic interaction liquid chromatography quadrupole time-of-flight tandem mass spectrometry (UP-HILIC-Q/TOF-MS/MS) was developed to analyze a complex mixture of dextran oligosaccharide products to determine the action pattern of dextranase. No derivatization of oligosaccharides was required and the impact of the α- and β-configurations of the native oligosaccharides on the chromatographic separation was eliminated. The 1→6, 1→3, 1→4 backbone linkages and the branch linkages of these oligosaccharides were all distinguished from diagnostic ions in their MS/MS spectra, including fragments corresponding to (0,2)A, (0,3)A, (0,4)A, B-H2O, (2,5)A, and (3,5)A. The sequences of the oligosaccharide products were similarly established. Thus, the complex oligosaccharide mixtures in dextran digestion products were profiled and identified using this method. The more enzyme-resistant structures in dextran were established using much less sample, labor, time, and uncertainty than in previous studies. This method provides an efficient, sensitive, and straightforward way to monitor the entire process of digestion, establish the action pattern of the dextranase from Penicillium sp., and to support the proper industrial application of dextranase.

  11. UP-HILIC-MS/MS to Determine the Action Pattern of Penicillium sp. Dextranase

    NASA Astrophysics Data System (ADS)

    Yi, Lin; Sun, Xue; Du, Kenze; Ouyang, Yilan; Wu, Chengling; Xu, Naiyu; Linhardt, Robert J.; Zhang, Zhenqing

    2015-07-01

    Investigation of the action pattern of enzymes acting on carbohydrates is challenging, as both the substrate and the digestion products are complex mixtures. Dextran and its enzyme-derived oligosaccharides are widely used for many industrial applications. In this work, a new method relying on ultra-performance hydrophilic interaction liquid chromatography quadrupole time-of-flight tandem mass spectrometry (UP-HILIC- Q/TOF-MS/MS) was developed to analyze a complex mixture of dextran oligosaccharide products to determine the action pattern of dextranase. No derivatization of oligosaccharides was required and the impact of the α- and β-configurations of the native oligosaccharides on the chromatographic separation was eliminated. The 1→6, 1→3, 1→4 backbone linkages and the branch linkages of these oligosaccharides were all distinguished from diagnostic ions in their MS/MS spectra, including fragments corresponding to 0,2A, 0,3A, 0,4A, B-H2O, 2,5A, and 3,5A. The sequences of the oligosaccharide products were similarly established. Thus, the complex oligosaccharide mixtures in dextran digestion products were profiled and identified using this method. The more enzyme-resistant structures in dextran were established using much less sample, labor, time, and uncertainty than in previous studies. This method provides an efficient, sensitive, and straightforward way to monitor the entire process of digestion, establish the action pattern of the dextranase from Penicillium sp., and to support the proper industrial application of dextranase.

  12. Continuous thermographic observation may predict extravasation in chemotherapy-treated patients.

    PubMed

    Oya, Maiko; Murayama, Ryoko; Oe, Makoto; Yabunaka, Koichi; Tanabe, Hidenori; Takahashi, Toshiaki; Matsui, Yuko; Otomo, Eiko; Komiyama, Chieko; Sanada, Hiromi

    2017-06-01

    Extravasation, or leakage of vesicant drugs into subcutaneous tissues, causes serious complications such as induration and necrosis in chemotherapy-treated patients. As macroscopic observation may overlook symptoms during infusion, we focused on skin temperature changes at puncture sites and studied thermographic patterns related to induration or necrosis caused by extravasation. Outpatients undergoing chemotherapy using peripheral intravenous catheters were enrolled in this prospective observational study. We filmed and classified infrared thermography movies of puncture sites during infusion; ultrasonography was also utilized at puncture sites to observe the subcutaneous condition. Multiple logistic regression analysis was performed to examine the association of thermographic patterns with induration or necrosis observed on the next chemotherapy day. Differences in patient characteristics, puncture sites, and infusions were analyzed by Mann-Whitney's U test and Fisher's exact test according to thermographic patterns. Eight patients developed induration among 74 observations in 62 patients. Among six thermographic patterns, a fan-shaped lower temperature area gradually spreading from the puncture site (fan at puncture site) was significantly associated with induration. Ultrasonography revealed that catheters of patients with fan at puncture site remained in the vein at the end of infusion, indicating that the infusion probably leaked from the puncture site. Patients with fan at puncture site had no significant differences in characteristics and infusion conditions compared with those with the other five thermographic patterns. We determined that fan at puncture site was related to induration caused by extravasation. Continuous thermographic observation may enable us to predict adverse events of chemotherapy. Copyright © 2017. Published by Elsevier Ltd.

  13. Selective modes determine evolutionary rates, gene compactness and expression patterns in Brassica.

    PubMed

    Guo, Yue; Liu, Jing; Zhang, Jiefu; Liu, Shengyi; Du, Jianchang

    2017-07-01

    It has been well documented that most nuclear protein-coding genes in organisms can be classified into two categories: positively selected genes (PSGs) and negatively selected genes (NSGs). The characteristics and evolutionary fates of different types of genes, however, have been poorly understood. In this study, the rates of nonsynonymous substitution (K a ) and the rates of synonymous substitution (K s ) were investigated by comparing the orthologs between the two sequenced Brassica species, Brassica rapa and Brassica oleracea, and the evolutionary rates, gene structures, expression patterns, and codon bias were compared between PSGs and NSGs. The resulting data show that PSGs have higher protein evolutionary rates, lower synonymous substitution rates, shorter gene length, fewer exons, higher functional specificity, lower expression level, higher tissue-specific expression and stronger codon bias than NSGs. Although the quantities and values are different, the relative features of PSGs and NSGs have been largely verified in the model species Arabidopsis. These data suggest that PSGs and NSGs differ not only under selective pressure (K a /K s ), but also in their evolutionary, structural and functional properties, indicating that selective modes may serve as a determinant factor for measuring evolutionary rates, gene compactness and expression patterns in Brassica. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

  14. Objective categorization of interferential tear film lipid layer pattern: validation of the technique

    NASA Astrophysics Data System (ADS)

    García-Resúa, C.; Giráldez, M. J.; Barreira, N.; Penedo, M. G.; Yebra-Pimentel, E.

    2011-05-01

    Purpose: The lipid layer of the tear film limits evaporation during the inter-blink interval and also affects tear stability. This study was designed to validate a new software application designed to characterize the tear film lipid layer through texture and colour pattern recognition. Methods: Using the Tearscope-plus (slit lamp magnification 200X), the lipid layer was examined in 105 healthy young adults and interference photographs acquired with a Topcon DV-3 digital camera. The photographs were classified by the new software and by 2 further observers (observer 1 and observer 2) with experience in examining the eye surface. Results: Strong correlation was detected between the categories determined by the new application, observer 1 and observer 2 (Cramer's V, from 0.81 to 0.87, p<0.001). Best agreement (96.2%) was noted between the new method and observers 1 and 2 for recognizing meshwork patterns, whereas observers 1 and 2 showed greatest correspondence when classifying colour fringe patterns. Conclusions: The new application can objectively categorize LLPs using the Tearscope-plus.

  15. Sources of Information and Behavioral Patterns in Online Health Forums: Observational Study

    PubMed Central

    Friede, Tim; Grabowski, Jens; Koschack, Janka; Makedonski, Philip; Himmel, Wolfgang

    2014-01-01

    Background Increasing numbers of patients are raising their voice in online forums. This shift is welcome as an act of patient autonomy, reflected in the term “expert patient”. At the same time, there is considerable concern that patients can be easily misguided by pseudoscientific research and debate. Little is known about the sources of information used in health-related online forums, how users apply this information, and how they behave in such forums. Objective The intent of the study was to identify (1) the sources of information used in online health-related forums, and (2) the roles and behavior of active forum visitors in introducing and disseminating this information. Methods This observational study used the largest German multiple sclerosis (MS) online forum as a database, analyzing the user debate about the recently proposed and controversial Chronic Cerebrospinal Venous Insufficiency (CCSVI) hypothesis. After extracting all posts and then filtering relevant CCSVI posts between 01 January 2008 and 17 August 2012, we first identified hyperlinks to scientific publications and other information sources used or referenced in the posts. Employing k-means clustering, we then analyzed the users’ preference for sources of information and their general posting habits. Results Of 139,912 posts from 11,997 threads, 8628 posts discussed or at least mentioned CCSVI. We detected hyperlinks pointing to CCSVI-related scientific publications in 31 posts. In contrast, 2829 different URLs were posted to the forum, most frequently referring to social media, such as YouTube or Facebook. We identified a total of 6 different roles of hyperlink posters including Social Media Fans, Organization Followers, and Balanced Source Users. Apart from the large and nonspecific residual category of the “average user”, several specific behavior patterns were identified, such as the small but relevant groups of CCSVI-Focused Responders or CCSVI Activators. Conclusions The bulk

  16. [Type 2 Diabetes and Dietary Patterns 1961 to 2009: Some Social Determinants in Mexico].

    PubMed

    Moreno-Altamirano, Laura; Silberman, Martín; Hernández-Montoya, Dewi; Capraro, Santiago; Soto-Estrada, Guadalupe; García-García, Juan José; Sandoval-Bosh, Elvira

    2015-01-01

    In order to analyze whether the increase in mortality from diabetes in Mexico is related to changes in eating patterns over the period 1961 to 2009, and if they in turn could be explained in the Mexican socioeconomic context, we conducted an ecological study with information from the Food Balance Sheets FAO. A cluster analysis was performed to shape eating patterns (three) and some socioeconomic variables were analyzed. It was observed that the energy derived from cereals and legumes (beans) was significantly reduced, and simultaneously, energy from sugars, animal foods, and vegetable fats had a significant increase. Various socioeconomic conditions may have favored changes in diet and increased mortality from diabetes. These conditions are: trade liberalization, low growth, rising inequality and informal work, declining agriculture, falling real wages in relation to the value of what is called the “basic food and non-food baskets”, increasing prices of healthy food,low cost of processed foods and beverages, and the lack of control in the food market.

  17. The Spanish version of the Self-Determination Inventory Student Report: application of item response theory to self-determination measurement.

    PubMed

    Mumbardó-Adam, C; Guàrdia-Olmos, J; Giné, C; Raley, S K; Shogren, K A

    2018-04-01

    A new measure of self-determination, the Self-Determination Inventory: Student Report (Spanish version), has recently been adapted and empirically validated in Spanish language. As it is the first instrument intended to measure self-determination in youth with and without disabilities, there is a need to further explore and strengthen its psychometric analysis based on item response patterns. Through item response theory approach, this study examined item observed distributions across the essential characteristics of self-determination. The results demonstrated satisfactory to excellent item functioning patterns across characteristics, particularly within agentic action domains. Increased variability across items was also found within action-control beliefs dimensions, specifically within the self-realisation subdomain. These findings further support the instrument's psychometric properties and outline future research directions. © 2017 MENCAP and International Association of the Scientific Study of Intellectual and Developmental Disabilities and John Wiley & Sons Ltd.

  18. Determination of antibiotic resistance pattern and bacteriocin sensitivity of Listeria monocytogenes strains isolated from different foods in turkey

    USDA-ARS?s Scientific Manuscript database

    This study aimed to determine the antibiotic resistance pattern and bacteriocin sensitivity of Listeria monocytogenes strains isolated from animal derived foods. With disc diffusion assay, all fourteen L. monocytogenes strains were susceptible to the antibiotics, including penicillin G, vancomycin, ...

  19. Critical fault patterns determination in fault-tolerant computer systems

    NASA Technical Reports Server (NTRS)

    Mccluskey, E. J.; Losq, J.

    1978-01-01

    The method proposed tries to enumerate all the critical fault-patterns (successive occurrences of failures) without analyzing every single possible fault. The conditions for the system to be operating in a given mode can be expressed in terms of the static states. Thus, one can find all the system states that correspond to a given critical mode of operation. The next step consists in analyzing the fault-detection mechanisms, the diagnosis algorithm and the process of switch control. From them, one can find all the possible system configurations that can result from a failure occurrence. Thus, one can list all the characteristics, with respect to detection, diagnosis, and switch control, that failures must have to constitute critical fault-patterns. Such an enumeration of the critical fault-patterns can be directly used to evaluate the overall system tolerance to failures. Present research is focused on how to efficiently make use of these system-level characteristics to enumerate all the failures that verify these characteristics.

  20. Determinants of changes in dietary patterns among Chinese immigrants: a cross-sectional analysis.

    PubMed

    Rosenmöller, Doenja L; Gasevic, Danijela; Seidell, Jaap; Lear, Scott A

    2011-05-18

    Chinese individuals who have immigrated to a Western country initially tend to have a lower risk of cardiovascular disease (CVD) compared to people who are already living there. Some studies have found, however, that CVD risk increases over time in immigrants and that immigration to a western country is associated with changes in dietary patterns. This could have unfavourable effects on the risk of CVD. There is limited knowledge on the food patterns, awareness and knowledge about healthy nutrition among Chinese immigrants. The objective for this study is to explore changes in food patterns, and levels of awareness and knowledge of healthy nutrition by length of residence among Chinese immigrants to Canada. 120 Chinese individuals born in China but currently living in Canada completed an assessment on socio-demographic characteristics, changes in dietary patterns and variables of awareness and knowledge about healthy foods. With ordinal logistic regression the associations between the quartiles of length of residence and dietary patterns, variables of awareness and knowledge about healthy foods were explored, adjusting for age, sex, education and body mass index. More than 50% of the participants reported increasing consumption of fruits and vegetables, decreasing the use of deep-frying after immigration. Increased awareness and knowledge about healthy foods was reported by more than 50% of the participants. Ordinal regression indicated that Chinese immigrants who lived in Canada the longest, compared to Chinese immigrants who lived in Canada the shortest, consumed significant greater portion sizes (OR: 9.9; 95% CI: 3.11 - 31.15), dined out more frequently (OR: 15.8; 95% CI: 5.0 - 49.85), and consumed convenience foods more often (OR: 3.5; 95% CI: 1.23 - 10.01). Chinese immigrants reported some favourable changes in their dietary intake and greater awareness and more knowledge about healthy foods after immigration. However, an increase in portion size, an increased

  1. Patterns and determinants of wood physical and mechanical properties across major tree species in China.

    PubMed

    Zhu, JiangLing; Shi, Yue; Fang, LeQi; Liu, XingE; Ji, ChengJun

    2015-06-01

    The physical and mechanical properties of wood affect the growth and development of trees, and also act as the main criteria when determining wood usage. Our understanding on patterns and controls of wood physical and mechanical properties could provide benefits for forestry management and bases for wood application and forest tree breeding. However, current studies on wood properties mainly focus on wood density and ignore other wood physical properties. In this study, we established a comprehensive database of wood physical properties across major tree species in China. Based on this database, we explored spatial patterns and driving factors of wood properties across major tree species in China. Our results showed that (i) compared with wood density, air-dried density, tangential shrinkage coefficient and resilience provide more accuracy and higher explanation power when used as the evaluation index of wood physical properties. (ii) Among life form, climatic and edaphic variables, life form is the dominant factor shaping spatial patterns of wood physical properties, climatic factors the next, and edaphic factors have the least effects, suggesting that the effects of climatic factors on spatial variations of wood properties are indirectly induced by their effects on species distribution.

  2. Patterns of functional vision loss in glaucoma determined with archetypal analysis

    PubMed Central

    Elze, Tobias; Pasquale, Louis R.; Shen, Lucy Q.; Chen, Teresa C.; Wiggs, Janey L.; Bex, Peter J.

    2015-01-01

    Glaucoma is an optic neuropathy accompanied by vision loss which can be mapped by visual field (VF) testing revealing characteristic patterns related to the retinal nerve fibre layer anatomy. While detailed knowledge about these patterns is important to understand the anatomic and genetic aspects of glaucoma, current classification schemes are typically predominantly derived qualitatively. Here, we classify glaucomatous vision loss quantitatively by statistically learning prototypical patterns on the convex hull of the data space. In contrast to component-based approaches, this method emphasizes distinct aspects of the data and provides patterns that are easier to interpret for clinicians. Based on 13 231 reliable Humphrey VFs from a large clinical glaucoma practice, we identify an optimal solution with 17 glaucomatous vision loss prototypes which fit well with previously described qualitative patterns from a large clinical study. We illustrate relations of our patterns to retinal structure by a previously developed mathematical model. In contrast to the qualitative clinical approaches, our results can serve as a framework to quantify the various subtypes of glaucomatous visual field loss. PMID:25505132

  3. Interstellar Gas Flow Vector and Temperature Determination over 5 Years of IBEX Observations

    NASA Astrophysics Data System (ADS)

    Möbius, E.; Bzowski, M.; Fuselier, S. A.; Heirtzler, D.; Kubiak, M. A.; Kucharek, H.; Lee, M. A.; Leonard, T.; McComas, D. J.; Schwadron, N.; Sokół, J. M.; Wurz, P.

    2015-01-01

    The Interstellar Boundary Explorer (IBEX) observes the interstellar neutral gas flow trajectories at their perihelion in Earth's orbit every year from December through early April, when the Earth's orbital motion is into the oncoming flow. These observations have defined a narrow region of possible, but very tightly coupled interstellar neutral flow parameters, with inflow speed, latitude, and temperature as well-defined functions of inflow longitude. The best- fit flow vector is different by ≈ 3° and lower by ≈ 3 km/s than obtained previously with Ulysses GAS, but the temperature is comparable. The possible coupled parameter space reaches to the previous flow vector, but only for a substantially higher temperature (by ≈ 2000 K). Along with recent pickup ion observations and including historical observations of the interstellar gas, these findings have led to a discussion, whether the interstellar gas flow into the solar system has been stable or variable over time. These intriguing possibilities call for more detailed analysis and a longer database. IBEX has accumulated observations over six interstellar flow seasons. We review key observations and refinements in the analysis, in particular, towards narrowing the uncertainties in the temperature determination. We also address ongoing attempts to optimize the flow vector determination through varying the IBEX spacecraft pointing and discuss related implications for the local interstellar cloud and its interaction with the heliosphere.

  4. Patterns and determinants of mammal species occurrence in India

    USGS Publications Warehouse

    Karanth, K.K.; Nichols, J.D.; Hines, J.E.; Karanth, K.U.; Christensen, N.L.

    2009-01-01

    Many Indian mammals face range contraction and extinction, but assessments of their population status are hindered by the lack of reliable distribution data and range maps. 2. We estimated the current geographical ranges of 20 species of large mammals by applying occupancy models to data from country-wide expert. We modelled species in relation to ecological and social covariates (protected areas, landscape characteristics and human influences) based on a priori hypotheses about plausible determinants of mammalian distribution patterns. 3. We demonstrated that failure to incorporate detection probability in distribution survey methods underestimated habitat occupancy for all species. 4. Protected areas were important for the distribution of 16 species. However, for many species much of their current range remains unprotected. The availability of evergreen forests was important for the occurrence of 14 species, temperate forests for six species, deciduous forests for 15 species and higher altitude habitats for two species. Low human population density was critical for the occurrence of five species, while culturally based tolerance was important for the occurrence of nine other species. 5. Rhino Rhinoceros unicornis, gaur Bos gaurus and elephant Elephas maximus showed the most restricted ranges among herbivores, and sun bear Helarctos malayanus, brown bear Ursus arctos and tiger Panthera tigris were most restricted among carnivores. While cultural tolerance has helped the survival of some mammals, legal protection has been critically associated with occurrence of most species. 6. Synthesis and applications. Extent of range is an important determinant of species conservation status. Understanding the relationship of species occurrence with ecological and socio-cultural covariates is important for identification and management of key conservation areas. The combination of occupancy models with field data from country-wide experts enables reliable estimation of species

  5. On the ability of RegCM4 regional climate model to simulate surface solar radiation patterns over Europe: an assessment using satellite-based observations

    NASA Astrophysics Data System (ADS)

    Alexandri, G.; Georgoulias, A. K.; Zanis, P.; Katragkou, E.; Tsikerdekis, A.; Kourtidis, K.; Meleti, C.

    2015-11-01

    In this work, we assess the ability of RegCM4 regional climate model to simulate surface solar radiation (SSR) patterns over Europe. A decadal RegCM4 run (2000-2009) was implemented and evaluated against satellite-based observations from the Satellite Application Facility on Climate Monitoring (CM SAF), showing that the model simulates adequately the SSR patterns over the region. The SSR bias between RegCM4 and CM SAF is +1.5 % for MFG (Meteosat First Generation) and +3.3 % for MSG (Meteosat Second Generation) observations. The relative contribution of parameters that determine the transmission of solar radiation within the atmosphere to the deviation appearing between RegCM4 and CM SAF SSR is also examined. Cloud macrophysical and microphysical properties such as cloud fractional cover (CFC), cloud optical thickness (COT) and cloud effective radius (Re) from RegCM4 are evaluated against data from CM SAF. Generally, RegCM4 underestimates CFC by 24.3 % and Re for liquid/ice clouds by 36.1 %/28.3 % and overestimates COT by 4.3 %. The same procedure is repeated for aerosol optical properties such as aerosol optical depth (AOD), asymmetry factor (ASY) and single-scattering albedo (SSA), as well as other parameters, including surface broadband albedo (ALB) and water vapor amount (WV), using data from MACv1 aerosol climatology, from CERES satellite sensors and from ERA-Interim reanalysis. It is shown here that the good agreement between RegCM4 and satellite-based SSR observations can be partially attributed to counteracting effects among the above mentioned parameters. The potential contribution of each parameter to the RegCM4-CM SAF SSR deviations is estimated with the combined use of the aforementioned data and a~radiative transfer model (SBDART). CFC, COT and AOD are the major determinants of these deviations on a monthly basis; however, the other parameters also play an important role for specific regions and seasons. Overall, for the European domain, CFC, COT and

  6. Parameter-free determination of the exchange constant in thin films using magnonic patterning

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Langer, M.; Wagner, K.; Fassbender, J.

    2016-03-07

    An all-electrical method is presented to determine the exchange constant of magnetic thin films using ferromagnetic resonance. For films of 20 nm thickness and below, the determination of the exchange constant A, a fundamental magnetic quantity, is anything but straightforward. Among others, the most common methods are based on the characterization of perpendicular standing spin-waves. These approaches are however challenging, due to (i) very high energies and (ii) rather small intensities in this thickness regime. In the presented approach, surface patterning is applied to a permalloy (Ni{sub 80}Fe{sub 20}) film and a Co{sub 2}Fe{sub 0.4}Mn{sub 0.6}Si Heusler compound. Acting as amore » magnonic crystal, such structures enable the coupling of backward volume spin-waves to the uniform mode. Subsequent ferromagnetic resonance measurements give access to the spin-wave spectra free of unquantifiable parameters and, thus, to the exchange constant A with high accuracy.« less

  7. Spatiotemporal patterns of precipitation inferred from streamflow observations across the Sierra Nevada mountain range

    NASA Astrophysics Data System (ADS)

    Henn, Brian; Clark, Martyn P.; Kavetski, Dmitri; Newman, Andrew J.; Hughes, Mimi; McGurk, Bruce; Lundquist, Jessica D.

    2018-01-01

    Given uncertainty in precipitation gauge-based gridded datasets over complex terrain, we use multiple streamflow observations as an additional source of information about precipitation, in order to identify spatial and temporal differences between a gridded precipitation dataset and precipitation inferred from streamflow. We test whether gridded datasets capture across-crest and regional spatial patterns of variability, as well as year-to-year variability and trends in precipitation, in comparison to precipitation inferred from streamflow. We use a Bayesian model calibration routine with multiple lumped hydrologic model structures to infer the most likely basin-mean, water-year total precipitation for 56 basins with long-term (>30 year) streamflow records in the Sierra Nevada mountain range of California. We compare basin-mean precipitation derived from this approach with basin-mean precipitation from a precipitation gauge-based, 1/16° gridded dataset that has been used to simulate and evaluate trends in Western United States streamflow and snowpack over the 20th century. We find that the long-term average spatial patterns differ: in particular, there is less precipitation in the gridded dataset in higher-elevation basins whose aspect faces prevailing cool-season winds, as compared to precipitation inferred from streamflow. In a few years and basins, there is less gridded precipitation than there is observed streamflow. Lower-elevation, southern, and east-of-crest basins show better agreement between gridded and inferred precipitation. Implied actual evapotranspiration (calculated as precipitation minus streamflow) then also varies between the streamflow-based estimates and the gridded dataset. Absolute uncertainty in precipitation inferred from streamflow is substantial, but the signal of basin-to-basin and year-to-year differences are likely more robust. The findings suggest that considering streamflow when spatially distributing precipitation in complex terrain

  8. Star Pattern Recognition and Spacecraft Attitude Determination.

    DTIC Science & Technology

    1978-10-01

    Mr. Lawrence D. Ziems, Computer Programuer Prepared For: ,ti U.S. Army Engineer Topographic Laboratories Fort Belvoir, Virginia 22060 Contract No...CONTENTS PORIVAD i SIMARY iii 1.0 Introduction and System Overviev 1 2.0 Reference Frames Geometry and Kinematics 9 3.0 Star Pattern Recognition/Attitude...Laboratories (USAETL). The authors appreciate the capable guidance of Mr. L. A. Gambino, Director of the Computer Science Laboratory (USAETL), who served as

  9. Observed variations in U.S. frost timing linked to atmospheric circulation patterns

    NASA Astrophysics Data System (ADS)

    Strong, Courtenay; McCabe, Gregory J.

    2017-05-01

    Several studies document lengthening of the frost-free season within the conterminous United States (U.S.) over the past century, and report trends in spring and fall frost timing that could stem from hemispheric warming. In the absence of warming, theory and case studies link anomalous frost timing to atmospheric circulation anomalies. However, recent efforts to relate a century of observed changes in U.S. frost timing to various atmospheric circulations yielded only modest correlations, leaving the relative importance of circulation and warming unclear. Here, we objectively partition the U.S. into four regions and uncover atmospheric circulations that account for 25-48% of spring and fall-frost timing. These circulations appear responsive to historical warming, and they consistently account for more frost timing variability than hemispheric or regional temperature indices. Reliable projections of future variations in growing season length depend on the fidelity of these circulation patterns in global climate models.

  10. Observed variations in U.S. frost timing linked to atmospheric circulation patterns

    USGS Publications Warehouse

    Strong, Courtenay; McCabe, Gregory J.

    2017-01-01

    Several studies document lengthening of the frost-free season within the conterminous United States (U.S.) over the past century, and report trends in spring and fall frost timing that could stem from hemispheric warming. In the absence of warming, theory and case studies link anomalous frost timing to atmospheric circulation anomalies. However, recent efforts to relate a century of observed changes in U.S. frost timing to various atmospheric circulations yielded only modest correlations, leaving the relative importance of circulation and warming unclear. Here, we objectively partition the U.S. into four regions and uncover atmospheric circulations that account for 25–48% of spring and fall-frost timing. These circulations appear responsive to historical warming, and they consistently account for more frost timing variability than hemispheric or regional temperature indices. Reliable projections of future variations in growing season length depend on the fidelity of these circulation patterns in global climate models.

  11. Observed variations in U.S. frost timing linked to atmospheric circulation patterns.

    PubMed

    Strong, Courtenay; McCabe, Gregory J

    2017-05-23

    Several studies document lengthening of the frost-free season within the conterminous United States (U.S.) over the past century, and report trends in spring and fall frost timing that could stem from hemispheric warming. In the absence of warming, theory and case studies link anomalous frost timing to atmospheric circulation anomalies. However, recent efforts to relate a century of observed changes in U.S. frost timing to various atmospheric circulations yielded only modest correlations, leaving the relative importance of circulation and warming unclear. Here, we objectively partition the U.S. into four regions and uncover atmospheric circulations that account for 25-48% of spring and fall-frost timing. These circulations appear responsive to historical warming, and they consistently account for more frost timing variability than hemispheric or regional temperature indices. Reliable projections of future variations in growing season length depend on the fidelity of these circulation patterns in global climate models.

  12. Developing methods of determining unknown roational periods of asteroids via observations of (3122) Florence by the Harvard Observing Project

    NASA Astrophysics Data System (ADS)

    Abrams, Natasha Sarah; Bieryla, Allyson; Gomez, Sebastian; Huang, Jane; Lewis, John; Todd, Zoe; Alam, Munazza; Carmichael, Theron; Garrison, Lehman H.; Weaver, Ian; Chen, Chen; McGruder, Chima; Medina, Amber

    2018-06-01

    (3122) Florence is an asteroid that made the headlines with its close approach to Earth in late 2017. It is one of the biggest and brightest near-Earth asteroids that has been discovered and it has recently been found to have two moons. By observing the light reflected off an asteroid, we can measure its brightness over time and determine the rotational period of the asteroid. An asteroid’s rotational period can reveal information about its physical characteristics, such as its shape, and further our knowledge about processes that contribute to asteroid rotation in general. The Harvard Observing Project (HOP) is an initiative that allows undergraduates to learn about observational astronomy and take part in formal data collection and analysis. Over the course of the fall 2017 semester, HOP obtained four multi-hour, continuous observations in the R-band of the asteroid using the Harvard University 16-inch Clay Telescope. In our analysis, we reduced the images and performed astrometry and photometry on the data. The asteroid’s light curve was produced using AstroImageJ and we used the Python package gatspy to determine its rotational period. We found the rotational period to be 2.22 hours +/- 0.25, which agrees with the known rotational period of 2.3580 hours +/- 0.0002. This spring 2018 semester we are applying our methods to data collected on asteroids with unknown rotational periods and plan to present our findings.

  13. Atmospheric circulation patterns associated to the variability of River Ammer floods: evidence from observed and proxy data

    NASA Astrophysics Data System (ADS)

    Rimbu, N.; Czymzik, M.; Ionita, M.; Lohmann, G.; Brauer, A.

    2015-09-01

    The relationship between the frequency of River Ammer floods (southern Germany) and atmospheric circulation variability is investigated based on observational Ammer discharge data back to 1926 and a flood layer time series from varved sediments of the downstream Lake Ammersee for the pre-instrumental period back to 1766. A composite analysis reveals that, at synoptic time scales, observed River Ammer floods are associated with enhanced moisture transport from the Atlantic Ocean and the Mediterranean towards the Ammer region, a pronounced trough over Western Europe as well as enhanced potential vorticity at upper levels. We argue that this synoptic scale configuration can trigger heavy precipitation and floods in the Ammer region. Interannual to multidecadal increases in flood frequency as recorded in the instrumental discharge record are associated to a wave-train pattern extending from the North Atlantic to western Asia with a prominent negative center over western Europe. A similar atmospheric circulation pattern is associated to increases in flood layer frequency in the Lake Ammersee sediment record during the pre-instrumental period. We argue that the complete flood layer time-series from Lake Ammersee sediments covering the last 5500 years, contains information about atmospheric circulation variability on inter-annual to millennial time-scales.

  14. Is pigment patterning in fish skin determined by the Turing mechanism?

    PubMed

    Watanabe, Masakatsu; Kondo, Shigeru

    2015-02-01

    More than half a century ago, Alan Turing postulated that pigment patterns may arise from a mechanism that could be mathematically modeled based on the diffusion of two substances that interact with each other. Over the past 15 years, the molecular and genetic tools to verify this prediction have become available. Here, we review experimental studies aimed at identifying the mechanism underlying pigment pattern formation in zebrafish. Extensive molecular genetic studies in this model organism have revealed the interactions between the pigment cells that are responsible for the patterns. The mechanism discovered is substantially different from that predicted by the mathematical model, but it retains the property of 'local activation and long-range inhibition', a necessary condition for Turing pattern formation. Although some of the molecular details of pattern formation remain to be elucidated, current evidence confirms that the underlying mechanism is mathematically equivalent to the Turing mechanism. Copyright © 2014 Elsevier Ltd. All rights reserved.

  15. Applying Nyquist's method for stability determination to solar wind observations

    NASA Astrophysics Data System (ADS)

    Klein, Kristopher G.; Kasper, Justin C.; Korreck, K. E.; Stevens, Michael L.

    2017-10-01

    The role instabilities play in governing the evolution of solar and astrophysical plasmas is a matter of considerable scientific interest. The large number of sources of free energy accessible to such nearly collisionless plasmas makes general modeling of unstable behavior, accounting for the temperatures, densities, anisotropies, and relative drifts of a large number of populations, analytically difficult. We therefore seek a general method of stability determination that may be automated for future analysis of solar wind observations. This work describes an efficient application of the Nyquist instability method to the Vlasov dispersion relation appropriate for hot, collisionless, magnetized plasmas, including the solar wind. The algorithm recovers the familiar proton temperature anisotropy instabilities, as well as instabilities that had been previously identified using fits extracted from in situ observations in Gary et al. (2016). Future proposed applications of this method are discussed.

  16. Spatiotemporal Patterns Produced by Bacteria

    NASA Astrophysics Data System (ADS)

    Shimada, Yuji; Nakahara, Akio; Matsushita, Mitsugu; Matsuyama, Tohey

    1995-06-01

    Spatiotemporal patterns formed by a bacterial colony of Proteus mirabilis on an agar plate were observed. About half or one hour after the colony spread over the entire surface of the agar medium in a petridish, various patterns including target and spiral patterns appeared. They are very similar to those seen in other dissipative systems, such as chemical oscillations and electrohydrodynamic convective systems. Microscopic observations revealed that the collective motion of bacterial cells is responsible for the formation of these spatiotemporal patterns.

  17. Natural habitats matter: Determinants of spatial pattern in the composition of animal assemblages of the Czech Republic

    NASA Astrophysics Data System (ADS)

    Divíšek, Jan; Zelený, David; Culek, Martin; Št'astný, Karel

    2014-08-01

    Studies that explore species-environment relationships at a broad scale are usually limited by the availability of sufficient habitat description, which is often too coarse to differentiate natural habitat patches. Therefore, it is not well understood how the distribution of natural habitats affects broad-scale patterns in the distribution of animal species. In this study, we evaluate the role of field-mapped natural habitats, land-cover types derived from remote sensing and climate on the composition of assemblages of five distinct animal groups, namely non-volant mammals, birds, reptiles, amphibians and butterflies native to the Czech Republic. First, we used variation partitioning based on redundancy analysis to evaluate the extent to which the environmental variables and their spatial structure might underlie the observed spatial patterns in the composition of animal assemblages. Second, we partitioned variations explained by climate, natural habitats and land-cover to compare their relative importance. Finally, we tested the independent effects of each variable in order to evaluate the significance of their contributions to the environmental model. Our results showed that spatial patterns in the composition of assemblages of almost all the considered animal groups may be ascribed mostly to variations in the environment. Although the shared effects of climatic variables, natural habitats and land-cover types explained the largest proportion of variation in each animal group, the variation explained purely by natural habitats was always higher than the variation explained purely by climate or land-cover. We conclude that most spatial variation in the composition of assemblages of almost all animal groups probably arises from biological processes operating within a spatially structured environment and suggest that natural habitats are important to explain observed patterns because they often perform better than habitat descriptions based on remote sensing. This

  18. Design Support System for Coloring Illustrations by Using the Colors Preferred by a User as Determined from the Hue Patterns of Illustrations Prepared by that User

    NASA Astrophysics Data System (ADS)

    Fukai, Hironobu; Mitsukura, Yasue

    We propose a new design support system that can color illustrations according to a person's color preferences that are determined on the basis of the color patterns of illustrations prepared by that person. Recently, many design tools for promoting free design have been developed. However, preferences for various colors differ depending on individual personality. Therefore, a system that can automatically color various designs on the basis of human preference is required. In this study, we propose an automatic modeling system that can be used to model illustrations. To verify the effectiveness of the proposed system, we simulate a coloring design experiment to determine the color patterns preferred by some subjects by using various design data. By using the design data, we determine each subjects preferred color pattern, and send feedback on these individual color patterns to the proposed system.

  19. Dietary Patterns and Their Socioeconomic and Behavioral Determinants in 6- to 8-Year-Old Portuguese Children.

    PubMed

    Rodrigues, D; Muc, M; Rodrigues, P R M; Pinto, A Mota; Padez, C

    2016-01-01

    Adherence to a healthier diet is declining, with children consuming more saturated fats and simple carbohydrates. Factors influencing this choice were studied using a cross-sectional study with children (6 to 8 years old) living in Coimbra. Socioeconomic and behavioral factors were obtained from the parents. Dietary patterns of 1,063 children were identified: Mediterranean (MedDiet), saturated fats (SFatDiet), and base of Portuguese diet (BPDiet). Their relationship with socioeconomic and behavioral determinants was analyzed. SES determined strongly the dietary choices with lower SES being associated with higher consumption of SFatDiet and higher SES with BPDiet. Worse diet quality was shown to coexist with other unhealthy behaviors.

  20. Direct observation of interlocked domain walls and topological four-state vortex-like domain patterns in multiferroic YMnO{sub 3} single crystal

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tian, Lei; School of Materials Science and Engineering, Dalian Jiaotong University, Dalian, Liaoning 116028; Wang, Yumei, E-mail: wangym@iphy.ac.cn

    2015-03-16

    Using the advanced spherical aberration-corrected high angle annular dark field scanning transmission electron microscope imaging techniques, we investigated atomic-scale structural features of domain walls and domain patterns in YMnO{sub 3} single crystal. Three different types of interlocked ferroelectric-antiphase domain walls and two abnormal topological four-state vortex-like domain patterns are identified. Each ferroelectric domain wall is accompanied by a translation vector, i.e., 1/6[210] or −1/6[210], demonstrating its interlocked nature. Different from the four-state vortex domain patterns caused by a partial edge dislocation, two four-state vortex-like domain configurations have been obtained at atomic level. These observed phenomena can further extend our understandingmore » of the fascinating vortex domain patterns in multiferroic hexagonal rare-earth manganites.« less

  1. Eddy-induced salinity pattern in the North Pacific

    NASA Astrophysics Data System (ADS)

    Abe, H.; Ebuchi, N.; Ueno, H.; Ishiyama, H.; Matsumura, Y.

    2017-12-01

    This research examines spatio-temporal behavior of sea surface salinity (SSS) after intense rainfall events using observed data from Aquarius. Aquarius SSS in the North Pacific reveals one notable event in which SSS is locally freshened by intense rainfall. Although SSS pattern shortly after the rainfall reflects atmospheric pattern, its final form reflects ocean dynamic structure; an anticyclonic eddy. Since this anticyclonic eddy was located at SSS front created by precipitation, this eddy stirs the water in a clockwise direction. This eddy stirring was visible for several months. It is expected horizontal transport by mesoscale eddies would play significant role in determining upper ocean salinity structure.

  2. Space-based infrared scanning sensor LOS determination and calibration using star observation

    NASA Astrophysics Data System (ADS)

    Chen, Jun; Xu, Zhan; An, Wei; Deng, Xin-Pu; Yang, Jun-Gang

    2015-10-01

    This paper provides a novel methodology for removing sensor bias from a space based infrared (IR) system (SBIRS) through the use of stars detected in the background field of the sensor. Space based IR system uses the LOS (line of sight) of target for target location. LOS determination and calibration is the key precondition of accurate location and tracking of targets in Space based IR system and the LOS calibration of scanning sensor is one of the difficulties. The subsequent changes of sensor bias are not been taking into account in the conventional LOS determination and calibration process. Based on the analysis of the imaging process of scanning sensor, a theoretical model based on the estimation of bias angles using star observation is proposed. By establishing the process model of the bias angles and the observation model of stars, using an extended Kalman filter (EKF) to estimate the bias angles, and then calibrating the sensor LOS. Time domain simulations results indicate that the proposed method has a high precision and smooth performance for sensor LOS determination and calibration. The timeliness and precision of target tracking process in the space based infrared (IR) tracking system could be met with the proposed algorithm.

  3. The Use of Satellite Observed Cloud Patterns in Northern Hemisphere 300 mb and 1000/300 mb Numerical Analysis.

    DTIC Science & Technology

    1984-02-01

    prediction Extratropical cyclones Objective analysis Bogus techniques 20. ABSTRACT (Continue on reverse aide If necooearn mid Identify by block number) Jh A...quasi-objective statistical method for deriving 300 mb geopotential heights and 1000/300 mb thicknesses in the vicinity of extratropical cyclones 0I...with the aid of satellite imagery is presented. The technique utilizes satellite observed extratropical spiral cloud pattern parameters in conjunction

  4. Past and future impact of North Atlantic teleconnection patterns on the hydroclimate of the Caspian catchment area in CESM1.2.2 and observations

    NASA Astrophysics Data System (ADS)

    Nandini, Sri

    2017-04-01

    The Caspian Sea level has undergone dramatic variations of more than 3 m during the past century with important implications for the life of coastal people, economy and the ecosystem. The origin of these variations as well as future changes in the Caspian water budget are still a matter of debate. In this study, we examine the influence of the major seasonal North Atlantic teleconnection patterns, the North Atlantic Oscillation (NAO), the East Atlantic pattern (EA), the Scandinavian pattern (SCA), and the North Sea Caspian Pattern (NCP), on Caspian hydroclimate variability from 1850-2000 CE. Numerical experiments at different atmospheric grid resolutions (2° and 1°) are carried out with the coupled Community Earth System Model (CESM1.2.2). We test model skills under different resolutions through validation against observational data by various statistical methods (Empirical Orthogonal Functions, Taylor diagrams, linear regressions and Spearman rank correlation). Results reveal the strongest simulated signal in winter (DJF) with high explained variances for 1° CESM1.2.2 NAO (39%) and EA (15.7%), similar to observational data. The model is unable to reproduce the SCA pattern in the third EOF, which is found in the observations. The modelled NAO has a strong influence on winter temperature and rainfall over the Caspian catchment area. A strong winter NCP induces above-average 2-meter temperatures over north Caspian region and lower-than-normal precipitation over the eastern Caspian sea. Our study suggests that the 1° version of CESM1.2.2 (with CAM5 atmosphere physics) shows adequate performance with respect to teleconnection maps during the historical period. Lastly, 1° model climate projections (2005-2100 CE) are performed with different Representative Concentration Pathways (RCP 4.5 and RCP 8.5) to examine potential changes in the teleconnection patterns and their influence on the Caspian region.

  5. Using long-term experimental evolution to uncover the patterns and determinants of molecular evolution of an Escherichia coli natural isolate in the streptomycin treated mouse gut

    PubMed Central

    Ghalayini, Mohamed; Magnan, Mélanie; Glodt, Jérémy; Pintard, Coralie; Dion, Sara; Denamur, Erick; Tenaillon, Olivier

    2017-01-01

    Though microbial ecology of the gut is now a major focus of interest, little is known about the molecular determinants of microbial adaptation in the gut. Experimental evolution coupled with whole genome sequencing can provide insights of the adaptive process. In vitro experiments have revealed some conserved patterns: intermediate convergence, epistatic interactions between beneficial mutations and mutations in global regulators. To test the relevance of these patterns and to identify the selective pressures acting in vivo, we have performed a long-term adaptation of an E. coli natural isolate, the streptomycin resistant strain 536, in the digestive tract of streptomycin treated mice. After a year of evolution, a clone from 15 replicates was sequenced. Consistently with in vitro observations, the identified mutations revealed a strong pattern of convergence at the mutation, gene, operon and functional levels. Yet, the rate of molecular evolution was lower than in in vitro and no mutations in global regulators were recovered. More specific targets were observed: the dgo operon, involved in the galactonate pathway that improved growth on D-galactonate, and rluD and gidB, implicated in the maturation of the ribosomes, which mutations improved growth only in the presence of streptomycin. As in vitro, the non-random associations of mutations within the same pathways suggested a role of epistasis in shaping the adaptive landscape. Overall, we show that “evolve and sequence” approach coupled to an analysis of convergence, when applied to a natural isolate, can be used to study adaptation in vivo and uncover the specific selective pressures of that environment. PMID:27661780

  6. Molecular features determining different partitioning patterns of papain and bromelain in aqueous two-phase systems.

    PubMed

    Rocha, Maria Victoria; Nerli, Bibiana Beatriz

    2013-10-01

    The partitioning patterns of papain (PAP) and bromelain (BR), two well-known cysteine-proteases, in polyethyleneglycol/sodium citrate aqueous two-phase systems (ATPSs) were determined. Polyethyleneglycols of different molecular weight (600, 1000, 2000, 4600 and 8000) were assayed. Thermodynamic characterization of partitioning process, spectroscopy measurements and computational calculations of protein surface properties were also carried out in order to explain their differential partitioning behavior. PAP was observed to be displaced to the salt-enriched phase in all the assayed systems with partition coefficients (KpPAP) values between 0.2 and 0.9, while BR exhibited a high affinity for the polymer phase in systems formed by PEGs of low molecular weight (600 and 1000) with partition coefficients (KpBR) values close to 3. KpBR values resulted higher than KpPAP in all the cases. This difference could be assigned neither to the charge nor to the size of the partitioned biomolecules since PAP and BR possess similar molecular weight (23,000) and isoelectric point (9.60). The presence of highly exposed tryptophans and positively charged residues (Lys, Arg and His) in BR molecule would be responsible for a charge transfer interaction between PEG and the protein and, therefore, the uneven distribution of BR in these systems. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Determinants and patterns of service utilization and recourse to professionals for mental health reasons

    PubMed Central

    2014-01-01

    Background This study has a dual purpose: 1) identify determinants of healthcare service utilization for mental health reasons (MHR) in a Canadian (Montreal) catchment area; 2) determine the patterns of recourse to healthcare professionals in terms of frequency of visits and type of professionals consulted, and as it relates to the most prevalent mental disorders (MD) and psychological distress. Methods Data was collected from a random sample of 1,823 individuals interviewed after a two-year follow-up period. A regression analysis was performed to identify variables associated with service utilization and complementary analyses were carried out to better understand participants’ patterns of healthcare service utilization in relation to the most prevalent MD. Results Among 243 individuals diagnosed with a MD in the 12 months preceding an interview, 113 (46.5%) reported having used healthcare services for MHR. Determinants of service utilization were emotional and legal problems, number of MD, higher personal income, lower quality of life, inability of individuals to influence events occurring in their neighborhood, female gender and, marginally, lack of alcohol dependence in the past 12 months. Emotional problems were the most significant determinant of healthcare service utilization. Frequent visits with healthcare professionals were more likely associated with major depression and number of MD with or without dependence to alcohol or drugs. People suffering from major depression, psychological distress and social phobia were more likely to consult different professionals, while individuals with panic disorders relied on their family physician only. Concerning social phobia, panic disorders and psychological distress, more frequent visits with professionals did not translate into involvement of a higher number of professionals or vice-versa. Conclusions This study demonstrates the impact of emotional problems, neighborhood characteristics and legal problems in

  8. The Relationship between Observed Task Characteristics and the Pattern of Seventh Grade Students' Situational Engagement during a Science Unit

    NASA Astrophysics Data System (ADS)

    Glassman, Sarah J.

    Student engagement is an important aspect of teaching and learning. Traditionally, engagement has been measured as a static trait. This study measured engagement as a fluid trait in order to explore the relationship between seventh grade students' situational engagement over a science unit and five specific task characteristics. Further, this study investigated how the changing pattern of instruction is related to a changing pattern of student engagement. Informed by Self-Determination Theory, the five specific task characteristics investigated were: the use of tasks that give students opportunities to act autonomously (choice), the use of tasks that challenge students (challenge), constructive feedback from the teacher or peers that guides students work on the current task (feedback), the inclusion of tasks that require student collaboration (collaboration), and tasks in which the importance or relevance is explained to students or the task includes a real-world problem or scenario (real-life significance). Student engagement was measured as a multidimensional trait consisting of behavioral, emotional, and cognitive dimensions. Participants included two teachers and 37 students. Two classrooms were observed and video-recorded for 10 consecutive 1.5 hour blocks during a unit investigating cells. At the end of each block students completed a three item survey for each task. For all tasks in both classrooms, the cumulative presence of task characteristics correlated with student engagement. However, students' behavioral engagement negatively correlated with the use of choice. Students' engagement increased from low to high during four related tasks exhibiting the highest cumulative presence of task characteristics. Nine out of 10 tasks with the highest student engagement involved hands-on learning. However, students' engagement was lower during tasks elaborating on those hands-on tasks.

  9. Inter-Observer, Intra-Observer and Intra-Individual Reliability of Uroflowmetry Tests in Aged Men: A Generalizability Theory Approach.

    PubMed

    Liu, Ying-Buh; Yang, Stephen S; Hsieh, Cheng-Hsing; Lin, Chia-Da; Chang, Shang-Jen

    2014-05-01

    To evaluate the inter-observer, intra-observer and intra-individual reliability of uroflowmetry and post-void residual urine (PVR) tests in adult men. Healthy volunteers aged over 40 years were enrolled. Every participant underwent two sets of uroflowmetry and PVR tests with a 2-week interval between the tests. The uroflowmetry tests were interpreted by four urologists independently. Uroflowmetry curves were classified as bell-shaped, bell-shaped with tail, obstructive, restrictive, staccato, interrupted and tower-shaped and scored from 1 (highly abnormal) to 5 (absolutely normal). The agreements between the observers, interpretations and tests within individuals were analyzed using kappa statistics and intraclass correlation coefficients. Generalizability theory with decision analysis was used to determine how many observers, tests, and interpretations were needed to obtain an acceptable reliability (> 0.80). Of 108 volunteers, we randomly selected the uroflowmetry results from 25 participants for the evaluation of reliability. The mean age of the studied adults was 55.3 years. The intra-individual and intra-observer reliability on uroflowmetry tests ranged from good to very good. However, the inter-observer reliability on normalcy and specific type of flow pattern were relatively lower. In generalizability theory, three observers were needed to obtain an acceptable reliability on normalcy of uroflow pattern if the patient underwent uroflowmetry tests twice with one observation. The intra-individual and intra-observer reliability on uroflowmetry tests were good while the inter-observer reliability was relatively lower. To improve inter-observer reliability, the definition of uroflowmetry should be clarified by the International Continence Society. © 2013 Wiley Publishing Asia Pty Ltd.

  10. Nontraditional method for determining unperturbed orbits of unknown space objects using incomplete optical observational data

    NASA Astrophysics Data System (ADS)

    Perov, N. I.

    1985-02-01

    A physical-geometrical method for computing the orbits of earth satellites on the basis of an inadequate number of angular observations (N3) was developed. Specifically, a new method has been developed for calculating the elements of Keplerian orbits of unidentified artificial satellites using two angular observations (alpha sub k, S sub k, k = 1). The first section gives procedures for determining the topocentric distance to AES on the basis of one optical observation. This is followed by description of a very simple method for determining unperturbed orbits using two satellite position vectors and a time interval which is applicable even in the case of antiparallel AED position vectors, a method designated the R sub 2 iterations method.

  11. The changing pattern and determinants of declining consanguinity in Jordan during 1990-2012.

    PubMed

    Islam, M Mazharul

    2018-03-01

    Consanguinity is a deep rooted cultural trait in Jordan. To examine the patterns and determinants of declining rates of consanguineous marriage in Jordan during 1990-2012 in the context of the changing pattern of socio-economic and demographic conditions. The data come from the 1990 and 2012 Jordan Population and Family Health Surveys (JPFHSs). A total of 6461 women in 1990 and 11,352 women in 2012 were successfully interviewed. Descriptive and multivariate statistical techniques were used for data analysis. Consanguinity was found to be widely practiced (35% in 2012) until recent times in Jordan. However, there has been a secular declining trend over the last few decades as the practice of consanguinity has declined from 56% in 1990 to 35% in 2012. Increasing age at marriage and female education, higher level of education of husbands, declining family size, increasing rate of urbanisation and female employment, exposure to mass media and higher economic status appeared as significant predictors of declining consanguinity in Jordan. The findings of this study support Goode's hypothesis of a decrease of consanguinity with modernisation. Although consanguinity is a deeply rooted cultural trend in Jordan, it is gradually losing ground due to modernisation and socio-demographic transition of the country.

  12. The Observational Determination of the Primordial Helium Abundance: a Y2K Status Report

    NASA Astrophysics Data System (ADS)

    Skillman, Evan D.

    I review observational progress and assess the current state of the determination of the primordial helium abundance, Yp. At present there are two determinations with non-overlapping errors. My impression is that the errors have been under-estimated in both studies. I review recent work on errors assessment and give suggestions for decreasing systematic errors in future studies.

  13. Patterns and determinants of antenatal care utilization: analysis of national survey data in seven countdown countries

    PubMed Central

    Saad–Haddad, Ghada; DeJong, Jocelyn; Terreri, Nancy; Restrepo–Méndez, María Clara; Perin, Jamie; Vaz, Lara; Newby, Holly; Amouzou, Agbessi; Barros, Aluísio JD; Bryce, Jennifer

    2016-01-01

    Background Antenatal care (ANC) is critical for improving maternal and newborn health. WHO recommends that pregnant women complete at least four ANC visits. Countdown and other global monitoring efforts track the proportions of women who receive one or more visits by a skilled provider (ANC1+) and four or more visits by any provider (ANC4+). This study investigates patterns of drop–off in use between ANC1+ and ANC4+, and explores inequalities in women’s use of ANC services. It also identifies determinants of utilization and describes countries’ ANC–related policies, and programs. Methods We performed secondary analyses using Demographic Health Survey (DHS) data from seven Countdown countries: Bangladesh, Cambodia, Cameroon, Nepal, Peru, Senegal and Uganda. The descriptive analysis illustrates country variations in the frequency of visits by provider type, content, and by household wealth, women’s education and type of residence. We conducted a multivariable analysis using a conceptual framework to identify determinants of ANC utilization. We collected contextual information from countries through a standard questionnaire completed by country–based informants. Results Each country had a unique pattern of ANC utilization in terms of coverage, inequality and the extent to which predictors affected the frequency of visits. Nevertheless, common patterns arise. Women having four or more visits usually saw a skilled provider at least once, and received more evidence–based content interventions than women reporting fewer than four visits. A considerable proportion of women reporting four or more visits did not report receiving the essential interventions. Large disparities exist in ANC use by household wealth, women’s education and residence area; and are wider for a larger number of visits. The multivariable analyses of two models in each country showed that determinants had different effects on the dependent variable in each model. Overall, strong

  14. Patterns and determinants of antenatal care utilization: analysis of national survey data in seven countdown countries.

    PubMed

    Saad-Haddad, Ghada; DeJong, Jocelyn; Terreri, Nancy; Restrepo-Méndez, María Clara; Perin, Jamie; Vaz, Lara; Newby, Holly; Amouzou, Agbessi; Barros, Aluísio Jd; Bryce, Jennifer

    2016-06-01

    Antenatal care (ANC) is critical for improving maternal and newborn health. WHO recommends that pregnant women complete at least four ANC visits. Countdown and other global monitoring efforts track the proportions of women who receive one or more visits by a skilled provider (ANC1+) and four or more visits by any provider (ANC4+). This study investigates patterns of drop-off in use between ANC1+ and ANC4+, and explores inequalities in women's use of ANC services. It also identifies determinants of utilization and describes countries' ANC-related policies, and programs. We performed secondary analyses using Demographic Health Survey (DHS) data from seven Countdown countries: Bangladesh, Cambodia, Cameroon, Nepal, Peru, Senegal and Uganda. The descriptive analysis illustrates country variations in the frequency of visits by provider type, content, and by household wealth, women's education and type of residence. We conducted a multivariable analysis using a conceptual framework to identify determinants of ANC utilization. We collected contextual information from countries through a standard questionnaire completed by country-based informants. Each country had a unique pattern of ANC utilization in terms of coverage, inequality and the extent to which predictors affected the frequency of visits. Nevertheless, common patterns arise. Women having four or more visits usually saw a skilled provider at least once, and received more evidence-based content interventions than women reporting fewer than four visits. A considerable proportion of women reporting four or more visits did not report receiving the essential interventions. Large disparities exist in ANC use by household wealth, women's education and residence area; and are wider for a larger number of visits. The multivariable analyses of two models in each country showed that determinants had different effects on the dependent variable in each model. Overall, strong predictors of ANC initiation and having a higher

  15. A descriptive analysis of temporal and spatial patterns of variability in Puget Sound oceanographic properties

    Treesearch

    Stephanie Moore; Nathan J. Mantua; Jan A. Newton; Mitsuhiro Kawase; Mark J. Warner; Jonathan P. Kellogg

    2008-01-01

    Temporal and spatial patterns of variability in Puget Sound's oceanographic properties are determined using continuous vertical profile data from two long-term monitoring programs; monthly observations at 16 stations from 1993 to 2002, and biannual observations at 40 stations from 1998 to 2003. Climatological monthly means of temperature, salinity, and density...

  16. Graphical aids for visualizing and interpreting patterns in departures from agreement in ordinal categorical observer agreement data.

    PubMed

    Bangdiwala, Shrikant I

    2017-01-01

    When studying the agreement between two observers rating the same n units into the same k discrete ordinal categories, Bangdiwala (1985) proposed using the "agreement chart" to visually assess agreement. This article proposes that often it is more interesting to focus on the patterns of disagreement and visually understanding the departures from perfect agreement. The article reviews the use of graphical techniques for descriptively assessing agreement and disagreements, and also reviews some of the available summary statistics that quantify such relationships.

  17. Orbit determination based on meteor observations using numerical integration of equations of motion

    NASA Astrophysics Data System (ADS)

    Dmitriev, V.; Lupovka, V.; Gritsevich, M.

    2014-07-01

    We review the definitions and approaches to orbital-characteristics analysis applied to photographic or video ground-based observations of meteors. A number of camera networks dedicated to meteors registration were established all over the word, including USA, Canada, Central Europe, Australia, Spain, Finland and Poland. Many of these networks are currently operational. The meteor observations are conducted from different locations hosting the network stations. Each station is equipped with at least one camera for continuous monitoring of the firmament (except possible weather restrictions). For registered multi-station meteors, it is possible to accurately determine the direction and absolute value for the meteor velocity and thus obtain the topocentric radiant. Based on topocentric radiant one further determines the heliocentric meteor orbit. We aim to reduce total uncertainty in our orbit-determination technique, keeping it even less than the accuracy of observations. The additional corrections for the zenith attraction are widely in use and are implemented, for example, here [1]. We propose a technique for meteor-orbit determination with higher accuracy. We transform the topocentric radiant in inertial (J2000) coordinate system using the model recommended by IAU [2]. The main difference if compared to the existing orbit-determination techniques is integration of ordinary differential equations of motion instead of addition correction in visible velocity for zenith attraction. The attraction of the central body (the Sun), the perturbations by Earth, Moon and other planets of the Solar System, the Earth's flattening (important in the initial moment of integration, i.e. at the moment when a meteoroid enters the atmosphere), atmospheric drag may be optionally included in the equations. In addition, reverse integration of the same equations can be performed to analyze orbital evolution preceding to meteoroid's collision with Earth. To demonstrate the developed

  18. Determination of Vascular Dementia Brain in Distinct Frequency Bands with Whole Brain Functional Connectivity Patterns

    PubMed Central

    Zhang, Delong; Liu, Bo; Chen, Jun; Peng, Xiaoling; Liu, Xian; Fan, Yuanyuan; Liu, Ming; Huang, Ruiwang

    2013-01-01

    Recent studies have shown that multivariate pattern analysis (MVPA) can be useful for distinguishing brain disorders into categories. Such analyses can substantially enrich and facilitate clinical diagnoses. Using MPVA methods, whole brain functional networks, especially those derived using different frequency windows, can be applied to detect brain states. We constructed whole brain functional networks for groups of vascular dementia (VaD) patients and controls using resting state BOLD-fMRI (rsfMRI) data from three frequency bands - slow-5 (0.01∼0.027 Hz), slow-4 (0.027∼0.073 Hz), and whole-band (0.01∼0.073 Hz). Then we used the support vector machine (SVM), a type of MVPA classifier, to determine the patterns of functional connectivity. Our results showed that the brain functional networks derived from rsfMRI data (19 VaD patients and 20 controls) in these three frequency bands appear to reflect neurobiological changes in VaD patients. Such differences could be used to differentiate the brain states of VaD patients from those of healthy individuals. We also found that the functional connectivity patterns of the human brain in the three frequency bands differed, as did their ability to differentiate brain states. Specifically, the ability of the functional connectivity pattern to differentiate VaD brains from healthy ones was more efficient in the slow-5 (0.01∼0.027 Hz) band than in the other two frequency bands. Our findings suggest that the MVPA approach could be used to detect abnormalities in the functional connectivity of VaD patients in distinct frequency bands. Identifying such abnormalities may contribute to our understanding of the pathogenesis of VaD. PMID:23359801

  19. "Eyeball test" of thermographic patterns for predicting a successful lateral infraclavicular block.

    PubMed

    Andreasen, Asger M; Linnet, Karen E; Asghar, Semera; Rothe, Christian; Rosenstock, Charlotte V; Lange, Kai H W; Lundstrøm, Lars H

    2017-11-01

    Increased distal skin temperature can be used to predict the success of lateral infraclavicular (LIC) block. We hypothesized that an "eyeball test" of specific infrared thermographic patterns after LIC block could be used to determine block success. In this observational study, five observers trained in four distinct thermographic patterns independently evaluated thermographic images of the hands of 40 patients at baseline and at one-minute intervals for 30 min after a LIC block. Sensitivity, specificity, and predictive values of a positive and a negative test were estimated to evaluate the validity of specific thermographic patterns for predicting a successful block. Sensory and motor block of the musculocutaneous, radial, ulnar, and median nerves defined block success. Fleiss' kappa statistics of multiple interobserver agreements were used to evaluate reliability. As a diagnostic test, the defined specific thermographic patterns of the hand predicted a successful block with increasing accuracy over the 30-min observation period. Block success was predicted with a sensitivity of 92.4% (95% confidence interval [CI], 86.8 to 96.2) and with a specificity of 84.0% (95% CI, 70.3 to 92.4) at min 30. The Fleiss' kappa for the five observers was 0.87 (95% CI, 0.77 to 0.96). We conclude that visual evaluation by an eyeball test of specific thermographic patterns of the blocked hands may be useful as a valid and reliable diagnostic test for predicting a successful LIC block.

  20. Statistical Patterns of Ionospheric Convection Derived From Mid-Latitude, High-Latitude, and Polar SuperDARN HF Radar Observations

    NASA Astrophysics Data System (ADS)

    Thomas, E. G.; Shepherd, S. G.

    2017-12-01

    Global patterns of ionospheric convection have been widely studied in terms of the interplanetary magnetic field (IMF) magnitude and orientation in both the Northern and Southern Hemispheres using observations from the Super Dual Auroral Radar Network (SuperDARN). The dynamic range of driving conditions under which existing SuperDARN statistical models are valid is currently limited to periods when the high-latitude convection pattern remains above about 60° geomagnetic latitude. Cousins and Shepherd [2010] found this to correspond to intervals when the solar wind electric field Esw < 4.1 mV/m and IMF Bz is negative. Conversely, under northward IMF conditions (Bz > 0) the high-latitude radars often experience difficulties in measuring convection above about 85° geomagnetic latitude. In this presentation, we introduce a new statistical model of ionospheric convection which is valid for much more dominant IMF Bz conditions than was previously possible by including velocity measurements from the newly constructed tiers of radars in the Northern Hemisphere at midlatitudes and in the polar cap. This new model (TS17) is compared to previous statistical models derived from high-latitude SuperDARN observations (RG96, PSR10, CS10) and its impact on instantaneous Map Potential solutions is examined.

  1. Experimenting with a Visible Copper-Aluminum Displacement Reaction in Agar Gel and Observing Copper Crystal Growth Patterns to Engage Student Interest and Inquiry

    ERIC Educational Resources Information Center

    Xu, Xinhua; Wu, Meifen; Wang, Xiaogang; Yang, Yangyiwei; Shi, Xiang; Wang, Guoping

    2016-01-01

    The reaction process of copper-aluminum displacement in agar gel was observed at the microscopic level with a stereomicroscope; pine-like branches of copper crystals growing from aluminum surface into gel at a constant rate were observed. Students were asked to make hypotheses on the pattern formation and design new research approaches to prove…

  2. Methylation oligonucleotide microarray: a novel tool to analyze methylation patterns

    NASA Astrophysics Data System (ADS)

    Hou, Peng; Ji, Meiju; He, Nongyao; Lu, Zuhong

    2003-04-01

    A new technique to analyze methylation patterns in several adjacent CpG sites was developed and reported here. We selected a 336bp segment of the 5"-untranslated region and the first exon of the p16Ink4a gene, which include the most densely packed CpG fragment of the islands containing 32 CpG dinucleotides, as the investigated target. The probes that include all types of methylation patterns were designed to fabricate a DNA microarray to determine the methylation patterns of seven adjacent CpG dinucleotides sites. High accuracy and reproducibility were observed in several parallel experiments. The results led us to the conclusion that the methylation oligonucleotide microarray can be applied as a novel and powerful tool to map methylation patterns and changes in multiple CpG island loci in a variety of tumors.

  3. Shared decision-making in older patients with colorectal or pancreatic cancer: Determinants of patients' and observers' perceptions.

    PubMed

    Geessink, Noralie H; Ofstad, Eirik H; Olde Rikkert, Marcel G M; van Goor, Harry; Kasper, Jürgen; Schoon, Yvonne

    2018-06-13

    To identify determinants of older patients' perceptions of involvement in decision-making on colorectal (CRC) or pancreatic cancer (PC) treatment, and to compare these with determinants of observers' perceptions. Patients' perceptions of involvement were constructed by the 9-item SDM questionnaire (SDM-Q-9) and a Visual Analogue Scale for Involvement (VAS-I). Observers' perceptions were constructed by the OPTION5, OPTION12, and MAPPIN'SDM. Convergent validities were calculated between the patient-sided and observer instruments using Spearman's correlation coefficient. Linear regression was used to identify determinants per criterion. 58 CRC and 22 PC patients were included (mean age: 71.8 ± 5.2 years, 45.0% female). No significant correlations were found between the patient-sided and observer instruments. Patients' impression of involvement was influenced by patient characteristics such as quality of life and satisfaction, while observers' perceptions mainly referred to encounter characteristics such as the mean duration of consultations and general communication skills. Due to evident differences in determinants, older CRC/PC patients' and observers' perceptions of involvement should both be collected in evaluating the quality of medical decision-making. General communication skills should be integrated in SDM training interventions. New SDM measurement tools for patients are needed to sufficiently discriminate between the constructs of involvement and satisfaction. Copyright © 2018 Elsevier B.V. All rights reserved.

  4. Patterns of Adherence of Helicobacter pylori Clinical Isolates to Epithelial Cells, and its Association with Disease and with Virulence Factors.

    PubMed

    Vázquez-Jiménez, Flor Elizabeth; Torres, Javier; Flores-Luna, Lourdes; Cerezo, Silvia Giono; Camorlinga-Ponce, Margarita

    2016-02-01

    Adherence to the gastric epithelium is one of the most important steps of Helicobacter pylori to remain and cause disease. The aim of this study was to analyze whether H. pylori isolates from patients with different gastroduodenal diseases present differences in the pattern of adherence to gastric epithelial cells (AGS), in the ability to induce IL-8, and in the presence of virulence genes. We tested 75 H. pylori strains isolated from nonatrophic gastritis, gastric cancer, and duodenal ulcer patients. The adhesion pattern and IL-8 induction were determined in AGS cells, and invasion of AGS cells was studied using a gentamicin protection assay. The IL-8 levels induced were determined by ELISA. Helicobacter pylori strains presented diffuse adherence (DA) and localized (LA) adherence patterns, similar to those described for enteropathogenic E. coli (EPEC), were observed in AGS cells. A DA pattern was observed in 57% and LA in 43% of the strains, and DA was more frequent in isolates from patients with gastric cancer (p = 0.044). Strains with a LA pattern induced higher levels of IL-8 (p = 0.042) in AGS cells. The adherence pattern was not associated with neither invasiveness nor with the presence of virulence genes. Our study shows that H. pylori strains present adherence patterns to AGS cells resembling those observed in EPEC and that these patterns may be associated with disease and with activity on AGS cells. © 2015 John Wiley & Sons Ltd.

  5. Clinical and imaging features in different inner border-zone infarct patterns.

    PubMed

    Wang, Yujie; Wang, Jian

    2015-03-01

    The clinical and imaging features of different inner border-zone infarct patterns, corona radiata (CR) and centrum semiovale (CSO), is not quiet clear. Both are mostly reported together in previous studies. We intended to observe their clinical and imaging features. We observed 83 patients-47 cases with CR infarct lesion pattern and 36 cases with CSO. The lesion patterns were determined by diffusion-weighted imaging. Basic, clinical and radiologic features were compared between the patients with CR and CSO infarct lesion patterns. There was no significant difference between CR and CSO infarct patterns in terms of risk factors. However, patients with CR infarct had a higher initial National Institutes of Health Stroke Scale (NIHSS) score at admission (5.2 ± 2.3) than with CSO (3.9 ± 2.0, p = 0.009). Early clinical deterioration (OR, 2.42; 95% CI, 1.12-5.21; p = 0.024) and middle cerebral artery (MCA) stenosis (OR, 10.31; 95% CI, 3.30-32.19; p < 0.0001) were independently associated with the CR infarct lesion pattern. Partial infarct lesion shape (OR, 5.95; 95% CI, 1.40-25.33; p = 0.016) and internal carotid artery (ICA) stenosis (OR, 5.28; 95% CI, 1.92-14.51; p = 0.001) were independently correlated with the CSO infarct lesion pattern. Although CR and CSO infarct patterns might share common etiology and mechanisms, their clinical and imaging features are different.

  6. Rainfall pattern variability as climate change impact in The Wallacea Region

    NASA Astrophysics Data System (ADS)

    Pujiastuti, I.; Nurjani, E.

    2018-04-01

    The objective of the study is to observe the characteristic variability of rainfall pattern in the city located in every rainfall type, local (Kendari), monsoon (Manado), and equatorial (Palu). The result will be compared to determine which has the most significantly precipitation changing due to climate change impact. Rainfall variability in Indonesia illustrates precipitation variation thus the important variability is the variability of monthly rainfall. Monthly precipitation data for the period of 1961-2010 are collected from Indonesian Agency for Meteorological, Climatological, and Geophysical Agency. This data is calculated with the normal test statistical method to analyze rainfall variability. The result showed the pattern of trend and variability of rainfall in every city with the own characteristic which determines the rainfall type. Moreover, there is comparison of rainfall pattern changing between every rainfall type. This information is useful for climate change mitigation and adaptation strategies especially in water resource management form precipitation as well as the occurrence of meteorological disasters.

  7. Determining geographical spread pattern of MERS-CoV by distance method using Kimura model

    NASA Astrophysics Data System (ADS)

    Amiroch, Siti; Rohmatullah, Arif

    2017-03-01

    MERS-CoV or generally called as Middle East Respiratory Syndrome Coronavirus, a respiratory disease syndrome caused by a corona virus that attacks the respiratory tract ranging from mild to severe acute indication of fever, cough and shortness of breath. The cases happened relate to the countries in the Arabian Peninsula (Middle East) and there were 356 deaths have been reported due to the spread of the epidemic MERS. The data used in the case of MERS are the data DNA sequences taken from Genbank, the online database of the United States that stores the results of molecular biological experiments from all over the world (http://www.ncbi.nlm.nih.gov). In this case, bioinformatics plays an important role of reading sequences of DNA and genetic information by using the main device in the form of software that is supported by the availability of the Internet, while the analysis there in made and proven with mathematical methods. In similar research conducted by molecular biologists and physicians, the process of DNA sequencing is done with software that is already available like BLAST. In order to determine the MERS geographical distribution patterns in the Arabian Peninsula is done with program Clustal W, Bayesian, Phylip, etc. In this study, the writer use the Matlab simulation for all processes starting sequence alignment, counting the number of transitions and transversion substitutions for each sequence and its location up to the process of forming a phylogenetic tree that figures out the pattern of spread of the epidemic MERS. Mathematical analysis performed on a decline in the formula is to find Kimura evolutionary models and the process of forming a phylogenetic tree (the pattern of the epidemic MERS distribution) with neighbor joining algorithm. Finally it was obtained the pattern of geographical spread with 6 groups epidemic of MERS which ultimately turns out that all the MERS viruses that were spread in the Arabian Peninsula everything are almost the same as

  8. Holographic Moire, An Optical Tool For The Determination Of Displacements, Strains, Contours, And Slopes Of Surfaces

    NASA Astrophysics Data System (ADS)

    Sciammarella, Cesar A.

    1982-06-01

    In conventional holographic interferometry, the observed fringe patterns are determined by the object displacement and deformation, and by the illumination and observation configurations. The obtained information may not be in the most convenient form for further data processing. To overcome this problem, and to create new possibilities, holographic fringe patterns can be changed by modifying the optical setup. As a result of these modifications, well-known procedures of the moire method can be applied to holographic interferometry. Components of displacement and components of the strain tensor can be isolated and measured separately. Surface contours and slopes can also be determined.

  9. Prediction of optical communication link availability: real-time observation of cloud patterns using a ground-based thermal infrared camera

    NASA Astrophysics Data System (ADS)

    Bertin, Clément; Cros, Sylvain; Saint-Antonin, Laurent; Schmutz, Nicolas

    2015-10-01

    The growing demand for high-speed broadband communications with low orbital or geostationary satellites is a major challenge. Using an optical link at 1.55 μm is an advantageous solution which potentially can increase the satellite throughput by a factor 10. Nevertheless, cloud cover is an obstacle for this optical frequency. Such communication requires an innovative management system to optimize the optical link availability between a satellite and several Optical Ground Stations (OGS). The Saint-Exupery Technological Research Institute (France) leads the project ALBS (French acronym for BroadBand Satellite Access). This initiative involving small and medium enterprises, industrial groups and research institutions specialized in aeronautics and space industries, is currently developing various solutions to increase the telecommunication satellite bandwidth. This paper presents the development of a preliminary prediction system preventing the cloud blockage of an optical link between a satellite and a given OGS. An infrared thermal camera continuously observes (night and day) the sky vault. Cloud patterns are observed and classified several times a minute. The impact of the detected clouds on the optical beam (obstruction or not) is determined by the retrieval of the cloud optical depth at the wavelength of communication. This retrieval is based on realistic cloud-modelling on libRadtran. Then, using subsequent images, cloud speed and trajectory are estimated. Cloud blockage over an OGS can then be forecast up to 30 minutes ahead. With this information, the preparation of the new link between the satellite and another OGS under a clear sky can be prepared before the link breaks due to cloud blockage.

  10. Method for determining the octane rating of gasoline samples by observing corresponding acoustic resonances therein

    DOEpatents

    Sinha, Dipen N.; Anthony, Brian W.

    1997-01-01

    A method for determining the octane rating of gasoline samples by observing corresponding acoustic resonances therein. A direct correlation between the octane rating of gasoline and the frequency of corresponding acoustic resonances therein has been experimentally observed. Therefore, the octane rating of a gasoline sample can be directly determined through speed of sound measurements instead of by the cumbersome process of quantifying the knocking quality of the gasoline. Various receptacle geometries and construction materials may be employed. Moreover, it is anticipated that the measurements can be performed on flowing samples in pipes, thereby rendering the present method useful in refineries and distilleries.

  11. No difference in mitochondrial distribution is observed in human oocytes after cryopreservation.

    PubMed

    Stimpfel, Martin; Vrtacnik-Bokal, Eda; Virant-Klun, Irma

    2017-08-01

    The primary aim of this study was to determine if any difference in mitochondrial distribution can be observed between fresh and cryopreserved (slow-frozen/thawed and vitrified/warmed) oocytes when oocytes are stained with Mitotracker Red CMXRos and observed under a conventional fluorescent microscope. Additionally, the influence of cryopreservation procedure on the viable rates of oocytes at different maturation stages was evaluated. The germinal vesicle (GV) and MII oocytes were cryopreserved with slow-freezing and vitrification. After thawing/warming, oocytes were stained using Mitotracker Red CMXRos and observed under a conventional fluorescent microscope. Mitotracker staining revealed that in GV oocytes the pattern of mitochondrial distribution appeared as aggregated clusters around the whole oocyte. In mature MII oocytes, three different patterns of mitochondrial distribution were observed; a smooth pattern around the polar body with aggregated clusters at the opposite side of the polar body, a smooth pattern throughout the whole cell, and aggregated clusters as can be seen in GV oocytes. There were no significant differences in the observed patterns between fresh, vitrified/warmed and frozen/thawed oocytes. When comparing the viable rates of oocytes after two different cryopreservation procedures, the results showed no significant differences, although the trend of viable MII oocytes tends to be higher after vitrification/warming and for viable GV oocytes it tends to be higher after slow-freezing/thawing. Mitotracker Red CMXRos staining of mitochondria in oocytes did not reveal differences in mitochondrial distribution between fresh and cryopreserved oocytes at different maturity stages. Additionally, no difference was observed in the viable rates of GV and MII oocytes after slow-freezing/thawing and vitrification/warming.

  12. Male pattern baldness (image)

    MedlinePlus

    Male pattern baldness is a sex-linked characteristic that is passed from mother to child. A man can more accurately predict his chances of developing male pattern baldness by observing his mother's father than ...

  13. Riser Pattern: Another Determinant of Heart Failure With Preserved Ejection Fraction.

    PubMed

    Komori, Takahiro; Eguchi, Kazuo; Saito, Toshinobu; Hoshide, Satoshi; Kario, Kazuomi

    2016-10-01

    Paradoxical increase in blood pressure (BP) during sleep, exceeding those of awake BP, is called the "riser" BP pattern, and known as an abnormal circadian BP rhythm, has been reported to be associated with adverse cardiovascular prognoses. However, the significance of ambulatory BP in heart failure patients with preserved ejection fraction (HFpEF) has never been reported. Here, we tested our hypothesis that abnormal circadian BP rhythm is associated with HFpEF. The authors enrolled 508 patients with hospitalized HF (age 68±13 years; 315 men, 193 women). There were 232 cases of HFpEF and 276 cases of heart failure with reduced ejection fraction (HFrEF). The riser BP pattern was significantly more frequent in the HFpEF (28.9%) group compared with the HFrEF group (19.9%). In a multivariable logistic regression analysis, the riser BP pattern was associated with HFpEF (odds ratio, 1.73; 95% confidence interval, 1.02-2.91; P=.041) independent of the other covariates. In conclusion, the riser BP pattern was associated with HFpEF. ©2016 Wiley Periodicals, Inc.

  14. Rhizobial galactoglucan determines the predatory pattern of Myxococcus xanthus and protects Sinorhizobium meliloti from predation

    PubMed Central

    Pérez, Juana; Jiménez-Zurdo, José I.; Martínez-Abarca, Francisco; Millán, Vicenta; Shimkets, Lawrence J.; Muñoz-Dorado, José

    2014-01-01

    Summary Myxococcus xanthus is a social bacterium that preys on prokaryotic and eukaryotic microorganisms. Co-culture of M. xanthus with reference laboratory strains and field isolates of the legume symbiont Sinorhizobium meliloti revealed two different predatory patterns that resemble frontal and wolfpack attacks. Use of mutants impaired in the two types of M. xanthus surface motility (A or adventurous and S or social motility) and a csgA mutant, which is unable to form macroscopic travelling waves known as ripples, has demonstrated that both motility systems but not rippling are required for efficient predation. To avoid frontal attack and reduce killing rates, rhizobial cells require a functional expR gene. ExpR regulates expression of genes involved in a variety of functions. The use of S. meliloti mutants impaired in several of these functions revealed that the exopolysaccharide galactoglucan (EPS II) is the major determinant of the M. xanthus predatory pattern. The data also suggest that this biopolymer confers an ecological advantage to rhizobial survival in soil, which may have broad environmental implications. PMID:24707988

  15. In-vivo determination of chewing patterns using FBG and artificial neural networks

    NASA Astrophysics Data System (ADS)

    Pegorini, Vinicius; Zen Karam, Leandro; Rocha Pitta, Christiano S.; Ribeiro, Richardson; Simioni Assmann, Tangriani; Cardozo da Silva, Jean Carlos; Bertotti, Fábio L.; Kalinowski, Hypolito J.; Cardoso, Rafael

    2015-09-01

    This paper reports the process of pattern classification of the chewing process of ruminants. We propose a simplified signal processing scheme for optical fiber Bragg grating (FBG) sensors based on machine learning techniques. The FBG sensors measure the biomechanical forces during jaw movements and an artificial neural network is responsible for the classification of the associated chewing pattern. In this study, three patterns associated to dietary supplement, hay and ryegrass were considered. Additionally, two other important events for ingestive behavior studies were monitored, rumination and idle period. Experimental results show that the proposed approach for pattern classification has been capable of differentiating the materials involved in the chewing process with a small classification error.

  16. Pattern and determinants of birth weight in Oman.

    PubMed

    Islam, M M; ElSayed, M K

    2015-12-01

    The aim of this study was to analyse the pattern of birth weight (BW) and identify the factors affecting BW and the risk factors of low birth weight (LBW) in Oman. The data for the study came from the 2000 Oman National Health Survey conducted by the Ministry of Health. The survey covered a nationally representative sample of 2037 ever married Omani women of reproductive age. Data on birth weight were gathered from health cards of the infants born within five years before the survey date. The study considered 977 singleton live births for whom data on birth weights were available. LBW was defined as BW less than 2500 g. Descriptive statistics, analysis of variance, multivariate linear regression and logistic regression models were used for data analysis. The mean BW was found to be 3.09 (SD 0.51) kg. BW was found to be significantly lower among the infants with the following characteristics: born in Ad-Dhakhliyah region, born in rural areas, and whose mothers had low economic status, low parity (0-2), and late initiation of antenatal care (ANC) visit. The incidence of LBW was found to be 9% in Oman in 2000. Mother's education, economic status, region of residence, late initiation of first ANC visit and experience of pregnancy complications appeared as the significant determinants of LBW in Oman. In contrast to most other studies, this study demonstrates that mothers with an advanced level of education (secondary and above) are more likely to have infants with LBW in Oman. The study findings highlight the need of intervention for specific groups of women with higher risk of adverse BW outcomes. Copyright © 2015 The Royal Society for Public Health. Published by Elsevier Ltd. All rights reserved.

  17. Analysis of Ancient Fluvial Patterns on the Surface of Mars

    NASA Technical Reports Server (NTRS)

    Jethani, Henna; Williams, M. E.

    2010-01-01

    This project involves the study of ancient fluvial patterns on the surface of Mars, including raised curvilinear features (RCFs) and negative relief channels. It requires the use of geological images provided by the Mars Reconnaissance Orbiter to determine how water shaped the surface of Mars in the form of rivers, lakes and/or oceans approximately 3.5 billion years ago, during the Noachian period. The role of the intern is to examine the images and record the corresponding measurements of ancient river systems in an Excel spreadsheet to assist in determining the Noachian water cycle on Mars. Resources used to make these measurements include the Arena software, hand-drawn sketch maps, Microsoft Word, Microsoft Excel and the images provided by the Mars Reconnaissance Orbiter. The Context Imager (CTX) returns black and white images at a resolution of six meters per pixel. The camera can take images with a width of 30 km and a length of 160 km. Seventeen images were observed in total. Images are analyzed and notes are taken concerning their terminal deposits, stream ordering and drainage pattern. The Arena software is utilized to make the images more visible by allowing control of contrast and magnification. Once the image is adjusted, measurements: length, average width, drainage basin area, sinuous ridge area are recorded, at a magnification of one, through using the line segment and polygon tools. After an image has been analyzed and measured, a sketch map is drawn in order to clearly identify the various segments, basins and terminal deposits the intern observed. Observations are used to further classify the fluvial patterns; their drainage pattern is defined as dendritic, parallel, trellis, rectangular, radial, centripetal, deranged or discordant. Once observational notes are completed, mathematical relations are used to determine drainage density, stream frequency, theoretic basin area and sinuosity index. These data will be added to a larger data set that will

  18. Wall accumulation of bacteria with different motility patterns

    NASA Astrophysics Data System (ADS)

    Sartori, Paolo; Chiarello, Enrico; Jayaswal, Gaurav; Pierno, Matteo; Mistura, Giampaolo; Brun, Paola; Tiribocchi, Adriano; Orlandini, Enzo

    2018-02-01

    We systematically investigate the role of different swimming patterns on the concentration distribution of bacterial suspensions confined between two flat walls, by considering wild-type motility Escherichia coli and Pseudomonas aeruginosa, which perform Run and Tumble and Run and Reverse patterns, respectively. The experiments count motile bacteria at different distances from the bottom wall. In agreement with previous studies, an accumulation of motile bacteria close to the walls is observed. Different wall separations, ranging from 100 to 250 μ m , are tested. The concentration profiles result to be independent on the motility pattern and on the walls' separation. These results are confirmed by numerical simulations, based on a collection of self-propelled dumbbells-like particles interacting only through steric interactions. The good agreement with the simulations suggests that the behavior of the investigated bacterial suspensions is determined mainly by steric collisions and self-propulsion, as well as hydrodynamic interactions.

  19. Wall accumulation of bacteria with different motility patterns.

    PubMed

    Sartori, Paolo; Chiarello, Enrico; Jayaswal, Gaurav; Pierno, Matteo; Mistura, Giampaolo; Brun, Paola; Tiribocchi, Adriano; Orlandini, Enzo

    2018-02-01

    We systematically investigate the role of different swimming patterns on the concentration distribution of bacterial suspensions confined between two flat walls, by considering wild-type motility Escherichia coli and Pseudomonas aeruginosa, which perform Run and Tumble and Run and Reverse patterns, respectively. The experiments count motile bacteria at different distances from the bottom wall. In agreement with previous studies, an accumulation of motile bacteria close to the walls is observed. Different wall separations, ranging from 100 to 250μm, are tested. The concentration profiles result to be independent on the motility pattern and on the walls' separation. These results are confirmed by numerical simulations, based on a collection of self-propelled dumbbells-like particles interacting only through steric interactions. The good agreement with the simulations suggests that the behavior of the investigated bacterial suspensions is determined mainly by steric collisions and self-propulsion, as well as hydrodynamic interactions.

  20. Observational Δν-ρ¯ Relation for δ Sct Stars using Eclipsing Binaries and Space Photometry

    NASA Astrophysics Data System (ADS)

    García Hernández, A.; Martín-Ruiz, S.; Monteiro, Mário J. P. F. G.; Suárez, J. C.; Reese, D. R.; Pascual-Granado, J.; Garrido, R.

    2015-10-01

    Delta Scuti (δ Sct) stars are intermediate-mass pulsators, whose intrinsic oscillations have been studied for decades. However, modeling their pulsations remains a real theoretical challenge, thereby even hampering the precise determination of global stellar parameters. In this work, we used space photometry observations of eclipsing binaries with a δ Sct component to obtain reliable physical parameters and oscillation frequencies. Using that information, we derived an observational scaling relation between the stellar mean density and a frequency pattern in the oscillation spectrum. This pattern is analogous to the solar-like large separation but in the low order regime. We also show that this relation is independent of the rotation rate. These findings open the possibility of accurately characterizing this type of pulsator and validate the frequency pattern as a new observable for δ Sct stars.

  1. Patterns of motor recruitment can be determined using surface EMG.

    PubMed

    Wakeling, James M

    2009-04-01

    Previous studies have reported how different populations of motor units (MUs) can be recruited during dynamic and locomotor tasks. It was hypothesised that the higher-threshold units would contribute higher-frequency components to the sEMG spectra due to their faster conduction velocities, and thus recruitment patterns that increase the proportion of high-threshold units active would lead to higher-frequency elements in the sEMG spectra. This idea was tested by using a model of varying recruitment coupled to a three-layer volume conductor model to generate a series of sEMG signals. The recruitment varied from (A) orderly recruitment where the lowest-threshold MUs were initially activated and higher-threshold MUs were sequentially recruited as the contraction progressed, (B) a recurrent inhibition model that started with orderly recruitment, but as the higher-threshold units were activated they inhibited the lower-threshold MUs (C) nine models with intermediate properties that were graded between these two extremes. The sEMG was processed using wavelet analysis and the spectral properties quantified by their mean frequency, and an angle theta that was determined from the principal components of the spectra. Recruitment strategies that resulted in a greater proportion of faster MUs being active had a significantly lower theta and higher mean frequency.

  2. Effect of anxiety on behavioural pattern separation in humans

    PubMed Central

    Mathur, Ambika; Adu-Brimpong, Joel; Hale, Elizabeth A.; Ernst, Monique; Grillon, Christian

    2016-01-01

    Behavioural pattern separation (BPS), the ability to distinguish among similar stimuli based on subtle physical differences, has been used to study the mechanism underlying stimulus generalisation. Fear overgeneralisation is often observed in individuals with posttraumatic stress disorder and other anxiety disorders. However, the relationship between anxiety and BPS remains unclear. The purpose of this study was to determine the effect of anxiety (threat of shock) on BPS, which was assessed across separate encoding and retrieval sessions. Images were encoded/retrieved during blocks of threat or safety in a 2 × 2 factorial design. During retrieval, participants indicated whether images were new, old, or altered. Better accuracy was observed for altered images encoded during periods of threat compared to safety, but only if those images were also retrieved during periods of safety. These results suggest that overgeneralisation in anxiety may be due to altered pattern separation. PMID:26480349

  3. Determination of Reference Catalogs for Meridian Observations Using Statistical Method

    NASA Astrophysics Data System (ADS)

    Li, Z. Y.

    2014-09-01

    The meridian observational data are useful for developing high-precision planetary ephemerides of the solar system. These historical data are provided by the jet propulsion laboratory (JPL) or the Institut De Mecanique Celeste Et De Calcul Des Ephemerides (IMCCE). However, we find that the reference systems (realized by the fundamental catalogs FK3 (Third Fundamental Catalogue), FK4 (Fourth Fundamental Catalogue), and FK5 (Fifth Fundamental Catalogue), or Hipparcos), to which the observations are referred, are not given explicitly for some sets of data. The incompleteness of information prevents us from eliminating the systematic effects due to the different fundamental catalogs. The purpose of this paper is to specify clearly the reference catalogs of these observations with the problems in their records by using the JPL DE421 ephemeris. The data for the corresponding planets in the geocentric celestial reference system (GCRS) obtained from the DE421 are transformed to the apparent places with different hypothesis regarding the reference catalogs. Then the validations of the hypothesis are tested by two kinds of statistical quantities which are used to indicate the significance of difference between the original and transformed data series. As a result, this method is proved to be effective for specifying the reference catalogs, and the missed information is determined unambiguously. Finally these meridian data are transformed to the GCRS for further applications in the development of planetary ephemerides.

  4. Super Memory Bros.: going from mirror patterns to concordant patterns via similarity enhancements.

    PubMed

    Ozubko, Jason D; Joordens, Steve

    2008-12-01

    When memory is contrasted for stimuli belonging to distinct stimulus classes, one of two patterns is observed: a mirror pattern, in which one stimulus gives rise to higher hits but lower false alarms (e.g., the frequency-based mirror effect) or a concordant pattern, in which one stimulus class gives rise both to higher hits and to higher false alarms (e.g., the pseudoword effect). On the basis of the dual-process account proposed by Joordens and Hockley (2000), we predict that mirror patterns occur when one stimulus class is more familiar and less distinctive than another, whereas concordant patterns occur when one stimulus class is more familiar than another. We tested these assumptions within a video game paradigm using novel stimuli that allow manipulations in terms of distinctiveness and familiarity (via similarity). When more distinctive, less familiar items are contrasted with less distinctive, more familiar items, a mirror pattern is observed. Systematically enhancing the familiarity of stimuli transforms the mirror pattern to a concordant pattern as predicted. Although our stimuli differ considerably from those used in examinations of the frequency-based mirror effect and the pseudoword effect, the implications of our findings with respect to those phenomena are also discussed.

  5. Spatiotemporal ecohydrological patterns and processes in temperate uplands: linking field observations and model results

    NASA Astrophysics Data System (ADS)

    Dodd, N. H.; Baird, A. J.; Wainwright, J.; Dunn, S. M.

    2011-12-01

    There are obvious surface expressions - in terms of vegetation patterning - of ecohydrological feedbacks on dryland and peatland hillslopes. Much less is known about subsurface ecohydrological patterns, and whether or not they 'map onto' surface patterns. Likewise, few attempts have been made to investigate how such ecohydrological patterns affect whole-hillslope hydrological behaviour or how widespread they are in non-dryland and non-peatland hillslopes. In this study we investigate surface and near- surface patterning in temperate hillslopes, which to date have been the focus of much hydrological work but little ecohydrological work. In particular, we consider the extent to which the direct and the indirect effects of past and present plant assemblages on local and whole-hillslope soil moisture conditions may contribute to patterning. We have conducted a field study of two temperate upland hillslopes in Northern Scotland, UK, on one of which human intervention plays a major part in shaping the landscape. Repeat measurements have been made of near- surface soil-moisture content, taken at lag distances of 0.25 m to 20 m, under different antecedent hydrological conditions together with characterisation of plant assemblages at the same points through both ground-based vegetation surveys of 1 m × 1 m plots and kite aerial photography (KAP) of > 20 m2 plots. Results from this have indicated that changes in ecohydrological patterns can occur over small spatial scales (< 1 m2) and short time scales (< 1 day). Comparison of values of near-surface soil moisture content with topographic wetness indices, calculated using 1 -m resolution topographic data collected in the field, has highlighted that topography does not explain all of the spatial variation in soil moisture content at this scale. KAP images allowed detection of vegetation patterns not obvious from the ground. Comparison of KAP images and historic aerial photographs has highlighted the persistence of vegetation

  6. Determination of Sun Angles for Observations of Shock Waves on a Transport Aircraft

    NASA Technical Reports Server (NTRS)

    Fisher, David F.; Haering, Edward A., Jr.; Noffz, Gregory K.; Aguilar, Juan I.

    1998-01-01

    Wing compression shock shadowgraphs were observed on two flights during banked turns of an L-1011 aircraft at a Mach number of 0.85 and an altitude of 35,000 ft (10,700 m). Photos and video recording of the shadowgraphs were taken during the flights to document the shadowgraphs. Bright sunlight on the aircraft was required. The time of day, aircraft position, speed and attitudes were recorded to determine the sun azimuth and elevation relative to the wing quarter chord-line when the shadowgraphs were visible. Sun elevation and azimuth angles were documented for which the wing compression shock shadowgraphs were visible. The shadowgraph was observed for high to low elevation angles relative to the wing, but for best results high sun angles relative to the wing are desired. The procedures and equations to determine the sun azimuth and elevation angle with respect to the quarter chord-line is included in the Appendix.

  7. A characterization of the current communication patterns in Danish community pharmacies - an observational study.

    PubMed

    Kaae, Susanne; Mygind, Anna; Saleem, Sahdia

    2013-01-01

    Community pharmacies have been trying to expand their core function by counseling customers at the counter. This has been challenging given that customers' interest in receiving counseling may be limited. To characterize the current pharmacist-customer communication patterns to inform future studies and models of communication. Non-participant structured observations based on the works of Stevenson et al. were conducted. A random selection of one hundred encounters in five pharmacies in Denmark was obtained. Type of encounter, type of medicine purchased and the age and gender of the customer were observed, and associations between the parameters identified. Customers initiated 13% of the dialogs, whereas 60% were initiated by the staff (with 38% of the customers declining the offer). 26% of the encounters saw no communication about the medicine. The customers' level of interest in counseling varied significantly and more with the type of medicine purchased than the level of encouragement from the staff to initiate a dialog. The customers' interest in dialog, in contrast with the staff behavior, depended significantly on age and gender. Customers' interest in counseling varies significantly. Pharmacy staff should take this into consideration when trying to optimize communication. Copyright © 2013 Elsevier Inc. All rights reserved.

  8. Defining a "Zone of Impact": Transport Processes and Patterns for Small-Scale Land Runoff.

    NASA Astrophysics Data System (ADS)

    Largier, J. L.; Basdurak, B.

    2016-12-01

    Nearshore pollution is a well-recognized environmental problem, yet the pattern of this pollution is not well studied and it is little recognized in policy. Whether nutrients, pathogens or toxins, the highest concentrations of pollutants in the nearfield are controlled by transport and mixing, rather than decay of the constituent. Thus, this becomes a challenge to determine patterns of runoff (and tidal outflow) and to account for the dominant processes that control these patterns. Salinity and fecal indicator bacteria data exhibit coherent space-time patterns, indicating that a coherent "zone of impact" can be determined, i.e., a time-varying spatial zone in which the constituent of concern exceeds a reference concentration (level of concern). To explain field observations, modeling of small-scale runoff plumes and wave-driven transport can be used. In contrast to larger river plumes, wind forcing is a critical factor in plume behavior and the resultant pattern of pollution. This preliminary work suggests that coherent spatio-temporal patterns can explain the apparently not-so-well-behaved patterns of pollution that are reported when concentrations are under-sampled. And it throws out a challenge to nearshore oceanographers to better explain transport and mixing patterns for the benefit of reducing coastal pollution and its impacts.

  9. Mothers as Teachers: Instruction and Control Patterns Observed in Interactions of Middle-Class Mothers with Trainable Mentally Retarded and Nonretarded Children. Final Report Number 7.32.

    ERIC Educational Resources Information Center

    Dolley, Diane Greenough

    A study was conducted to compare teaching and control patterns used by mothers of 4- to 6-year-old trainable mentally retarded (TMR) children to patterns used by mothers of nonretarded children, and to evaluate an analysis strategy identifying sequential behavior chains from observational data. Literature was explored on three topics: cognitive…

  10. Patterns and causes of observed piñon pine mortality in the southwestern United States

    USGS Publications Warehouse

    Meddens, Arjan J.H.; Hicke, Jeff H.; Macalady, Alison K.; Buotte, P.C.; Cowles, T.R.; Allen, Craig D.

    2015-01-01

    Recently, widespread piñon pine die-off occurred in the southwestern United States. Here we synthesize observational studies of this event and compare findings to expected relationships with biotic and abiotic factors. Agreement exists on the occurrence of drought, presence of bark beetles and increased mortality of larger trees. However, studies disagree about the influences of stem density, elevation and other factors, perhaps related to study design, location and impact of extreme drought. Detailed information about bark beetles is seldom reported and their role is poorly understood. Our analysis reveals substantial limits to our knowledge regarding the processes that produce mortality patterns across space and time, indicating a poor ability to forecast mortality in response to expected increases in future droughts.

  11. Method for determining the octane rating of gasoline samples by observing corresponding acoustic resonances therein

    DOEpatents

    Sinha, D.N.; Anthony, B.W.

    1997-02-25

    A method is described for determining the octane rating of gasoline samples by observing corresponding acoustic resonances therein. A direct correlation between the octane rating of gasoline and the frequency of corresponding acoustic resonances therein has been experimentally observed. Therefore, the octane rating of a gasoline sample can be directly determined through speed of sound measurements instead of by the cumbersome process of quantifying the knocking quality of the gasoline. Various receptacle geometries and construction materials may be employed. Moreover, it is anticipated that the measurements can be performed on flowing samples in pipes, thereby rendering the present method useful in refineries and distilleries. 3 figs.

  12. A Space-Based Observational Strategy for Hydrogen Cosmology Using Dynamic Polarimetry and Pattern Recognition

    NASA Astrophysics Data System (ADS)

    Burns, Jack O.; Nhan, Bang; Bradley, Richard F.; Tauscher, Keith A.; Rapetti, David; Switzer, Eric

    2018-06-01

    The redshifted 21-cm monopole is expected to be a powerful probe of the epoch of the first stars and galaxies (10 < z < 80). The global 21-cm signal is sensitive to the thermal and ionization state of hydrogen gas and thus provides a tracer of sources of energetic photons—primarily hot stars and accreting black holes—which ionize and heat the high redshift intergalactic medium. In this talk, we present a strategy for observations of the global spectrum with a satellite placed in low lunar orbit, performing night-time 10-50 MHz observations, while on the farside to avoid terrestrial radio frequency interference, ionospheric corruption, and solar radio emissions. The primary challenge is observing a relatively weak signal in the presence of a strong galactic/extragalactic foreground. We employ a new technique using dynamic or projection-induced polarimetry that separates the polarized foreground from the unpolarized 21-cm signal. Initial results from a ground-based prototype called the Cosmic Twilight Polarimeter will be described which tentatively reveal the presence of the expected polarization signature from the foreground. Dynamic polarimetry, when combined with sophisticated pattern recognition techniques based on training sets, machine learning, and statistical information criteria offer promise for precise extraction of the 21-cm spectrum. We describe a new SmallSat mission concept, the Dark Ages Polarimetry Pathfinder (DAPPer), that will utilize these novel approaches for extending the recent detection of a 78 MHz signal down to lower frequencies where we can uniquely probe evidence for the first stars and dark matter.

  13. Low degree Earth's gravity coefficients determined from different space geodetic observations and climate models

    NASA Astrophysics Data System (ADS)

    Wińska, Małgorzata; Nastula, Jolanta

    2017-04-01

    Large scale mass redistribution and its transport within the Earth system causes changes in the Earth's rotation in space, gravity field and Earth's ellipsoid shape. These changes are observed in the ΔC21, ΔS21, and ΔC20 spherical harmonics gravity coefficients, which are proportional to the mass load-induced Earth rotational excitations. In this study, linear trend, decadal, inter-annual, and seasonal variations of low degree spherical harmonics coefficients of Earth's gravity field, determined from different space geodetic techniques, Gravity Recovery and Climate Experiment (GRACE), satellite laser ranging (SLR), Global Navigation Satellite System (GNSS), Earth rotation, and climate models, are examined. In this way, the contribution of each measurement technique to interpreting the low degree surface mass density of the Earth is shown. Especially, we evaluate an usefulness of several climate models from the Coupled Model Intercomparison Project phase 5 (CMIP5) to determine the low degree Earth's gravity coefficients using GRACE satellite observations. To do that, Terrestrial Water Storage (TWS) changes from several CMIP5 climate models are determined and then these simulated data are compared with the GRACE observations. Spherical harmonics ΔC21, ΔS21, and ΔC20 changes are calculated as the sum of atmosphere and ocean mass effect (GAC values) taken from GRACE and a land surface hydrological estimate from the selected CMIP5 climate models. Low degree Stokes coefficients of the surface mass density determined from GRACE, SLR, GNSS, Earth rotation measurements and climate models are compared to each other in order to assess their consistency. The comparison is done by using different types of statistical and signal processing methods.

  14. Research progress in radiation detectors, pattern recognition programs, and radiation damage determination in DNA

    NASA Technical Reports Server (NTRS)

    Baily, N. A.

    1973-01-01

    The radiological implications of statistical variations in energy deposition by ionizing radiation were investigated in the conduct of the following experiments: (1) study of the production of secondary particles generated by the passage of the primary radiation through bone and muscle; (2) the study of the ratio of nonreparable to reparable damage in DNA as a function of different energy deposition patterns generated by X rays versus heavy fast charged particles; (3) the use of electronic radiography systems for direct fluoroscopic tomography and for the synthesis of multiple planes and; (4) the determination of the characteristics of systems response to split fields having different contrast levels, and of minimum detectable contrast levels between the halves under realistic clinical situations.

  15. Optimal Asteroid Mass Determination from Planetary Range Observations: A Study of a Simplified Test Model

    NASA Technical Reports Server (NTRS)

    Kuchynka, P.; Laskar, J.; Fienga, A.

    2011-01-01

    Mars ranging observations are available over the past 10 years with an accuracy of a few meters. Such precise measurements of the Earth-Mars distance provide valuable constraints on the masses of the asteroids perturbing both planets. Today more than 30 asteroid masses have thus been estimated from planetary ranging data (see [1] and [2]). Obtaining unbiased mass estimations is nevertheless difficult. Various systematic errors can be introduced by imperfect reduction of spacecraft tracking observations to planetary ranging data. The large number of asteroids and the limited a priori knowledge of their masses is also an obstacle for parameter selection. Fitting in a model a mass of a negligible perturber, or on the contrary omitting a significant perturber, will induce important bias in determined asteroid masses. In this communication, we investigate a simplified version of the mass determination problem. Instead of planetary ranging observations from spacecraft or radar data, we consider synthetic ranging observations generated with the INPOP [2] ephemeris for a test model containing 25000 asteroids. We then suggest a method for optimal parameter selection and estimation in this simplified framework.

  16. KIC 8462852 Brightness Pattern Repeating Every 1600 days

    NASA Astrophysics Data System (ADS)

    Gary, Bruce; Bourne, Rafik

    2017-12-01

    Observations of KIC 8462852 (aka Boyajian's Star) reveal a yearlong fade pattern that is remarkably similar to the fade pattern derived from Kepler mission observations. The ground-based observations reported here can be described as a gradual fade that ended in late 2016 with the beginning of a yearlong U-shaped fade of 1.1 percent. Near the end of this U-shaped fade a series of very brief dips occurred. The Kepler data exhibit a similar pattern 1600 days earlier, except with an abrupt end of observations before the U-shape recovery. Observations lasting many years are needed, especially during our predicted repeat of the U-shape and short dip pattern in 2021.

  17. On determining fluxgate magnetometer spin axis offsets from mirror mode observations

    NASA Astrophysics Data System (ADS)

    Plaschke, Ferdinand; Narita, Yasuhito

    2016-09-01

    In-flight calibration of fluxgate magnetometers that are mounted on spacecraft involves finding their outputs in vanishing ambient fields, the so-called magnetometer offsets. If the spacecraft is spin-stabilized, then the spin plane components of these offsets can be relatively easily determined, as they modify the spin tone content in the de-spun magnetic field data. The spin axis offset, however, is more difficult to determine. Therefore, usually Alfvénic fluctuations in the solar wind are used. We propose a novel method to determine the spin axis offset: the mirror mode method. The method is based on the assumption that mirror mode fluctuations are nearly compressible such that the maximum variance direction is aligned to the mean magnetic field. Mirror mode fluctuations are typically found in the Earth's magnetosheath region. We introduce the method and provide a first estimate of its accuracy based on magnetosheath observations by the THEMIS-C spacecraft. We find that 20 h of magnetosheath measurements may already be sufficient to obtain high-accuracy spin axis offsets with uncertainties on the order of a few tenths of a nanotesla, if offset stability can be assumed.

  18. Foot-strike pattern and performance in a marathon

    PubMed Central

    Kasmer, Mark E.; Liu, Xue-cheng; Roberts, Kyle G.; Valadao, Jason M.

    2016-01-01

    Purpose To: 1) determine prevalence of heel-strike in a mid-size city marathon, 2) determine if there is an association between foot-strike classification and race performance, and 3) determine if there is an association between foot-strike classification and gender. Methods Foot-strike classification (fore-foot strike, mid-foot strike, heel strike, or split-strike), gender, and rank (position in race) were recorded at the 8.1 kilometer (km) mark for 2,112 runners at the 2011 Milwaukee Lakefront Marathon. Results 1,991 runners were classified by foot-strike pattern, revealing a heel-strike prevalence of 93.67% (n=1,865). A significant difference between foot-strike classification and performance was found using a Kruskal-Wallis test (p < 0.0001), with more elite performers being less likely to heel-strike. No significant difference between foot-strike classification and gender was found using a Fisher’s exact test. Additionally, subgroup analysis of the 126 non-heel strikers found no significant difference between shoe wear and performance using a Kruskal-Wallis test. Conclusions The high prevalence of heel-striking observed in this study reflects the foot-strike pattern of the majority of mid- to long-distance runners and more importantly, may predict their injury profile based on the biomechanics of a heel strike running pattern. This knowledge can aid the clinician in the appropriate diagnosis, management, and training modifications of the injured runner. PMID:23006790

  19. Field observations of swash zone flow patterns and 3D morphodynamics

    USGS Publications Warehouse

    Puelo, Jack A.; Holland, K. Todd; Kooney, Timothy N.; Sallenger,, Asbury H.; Edge, Billy L.

    2001-01-01

    Rapid video measurements of foreshore morphology and velocity were collected at Duck, NC in 1997 to investigate sediment transport processes in the swash zone. Estimates of foreshore evolution over a roughly 30 m cross-shore by 80 m alongshore study area were determined using a stereogrammetric technique. During the passage of a small storm (offshore wave heights increased from 1.4 to 2.5 m), the foreshore eroded nearly 40 cm in less than 4 hours. Dense, horizontal surface velocities were measured over a sub-region (roughly 30 m by 40 m) of the study area using a new particle image velocimetry technique. This technique was able to quantify velocities across the bore front approaching 5 m s–1 as well as the rapid velocities in the very shallow backwash flows. The velocity and foreshore topography measurements were used to test a three-dimensional energetics-based sediment transport model. Even though these data represent the most extensive and highly resolved swash measurements to date, the results showed that while the model could predict some of the qualitative trends in the observed foreshore change, it was a poor predictor of the observed magnitudes of foreshore change. Model — data comparisons differed by roughly an order of magnitude with observed foreshore changes on the order of 10's of centimeters and model predictions on the order of meters. This poor comparison suggests that future models of swash-zone sediment transport may require the inclusion of other physical processes such as bore turbulence, fluid accelerations and skewness, infiltration/exfiltration, water depth variations, and variable friction factors (to name a few).

  20. Adult mouse brain gene expression patterns bear an embryologic imprint

    PubMed Central

    Zapala, Matthew A.; Hovatta, Iiris; Ellison, Julie A.; Wodicka, Lisa; Del Rio, Jo A.; Tennant, Richard; Tynan, Wendy; Broide, Ron S.; Helton, Rob; Stoveken, Barbara S.; Winrow, Christopher; Lockhart, Daniel J.; Reilly, John F.; Young, Warren G.; Bloom, Floyd E.; Lockhart, David J.; Barlow, Carrolee

    2005-01-01

    The current model to explain the organization of the mammalian nervous system is based on studies of anatomy, embryology, and evolution. To further investigate the molecular organization of the adult mammalian brain, we have built a gene expression-based brain map. We measured gene expression patterns for 24 neural tissues covering the mouse central nervous system and found, surprisingly, that the adult brain bears a transcriptional “imprint” consistent with both embryological origins and classic evolutionary relationships. Embryonic cellular position along the anterior–posterior axis of the neural tube was shown to be closely associated with, and possibly a determinant of, the gene expression patterns in adult structures. We also observed a significant number of embryonic patterning and homeobox genes with region-specific expression in the adult nervous system. The relationships between global expression patterns for different anatomical regions and the nature of the observed region-specific genes suggest that the adult brain retains a degree of overall gene expression established during embryogenesis that is important for regional specificity and the functional relationships between regions in the adult. The complete collection of extensively annotated gene expression data along with data mining and visualization tools have been made available on a publicly accessible web site (www.barlow-lockhart-brainmapnimhgrant.org). PMID:16002470

  1. Physiologically induced color-pattern changes in butterfly wings: mechanistic and evolutionary implications.

    PubMed

    Otaki, Joji M

    2008-07-01

    A mechanistic understanding of the butterfly wing color-pattern determination can be facilitated by experimental pattern changes. Here I review physiologically induced color-pattern changes in nymphalid butterflies and their mechanistic and evolutionary implications. A type of color-pattern change can be elicited by elemental changes in size and position throughout the wing, as suggested by the nymphalid groundplan. These changes of pattern elements are bi-directional and bi-sided dislocation toward or away from eyespot foci and in both proximal and distal sides of the foci. The peripheral elements are dislocated even in the eyespot-less compartments. Anterior spots are more severely modified, suggesting the existence of an anterior-posterior gradient. In one species, eyespots are transformed into white spots with remnant-like orange scales, and such patterns emerge even at the eyespot-less "imaginary" foci. A series of these color-pattern modifications probably reveal "snap-shots" of a dynamic morphogenic signal due to heterochronic uncoupling between the signaling and reception steps. The conventional gradient model can be revised to account for these observed color-pattern changes.

  2. Finding the times that SMMR observed a ship

    NASA Technical Reports Server (NTRS)

    1979-01-01

    In order to facilitate the coincidence calculations, the coordinates of the ship and the satellite were transformed to the ECO system in which the equatorial plane is the plane of the satellite's orbit. The transformation matrices for each step are presented. The ship could be observed when it was in a band about the equator in the ECO system. The width of the band was determined by the scan pattern of the instrument.

  3. Excessive daytime sleepiness and its pattern among Indian college students.

    PubMed

    Kaur, Gurjeet; Singh, Amarjeet

    2017-01-01

    The objective of this study was to determine the prevalence and pattern of excessive daytime sleepiness (EDTS) in Indian college students. This was a cross-sectional study that was conducted among 1215 undergraduate students, using the Epworth Sleepiness Scale (ESS) and a sociodemographic survey. A high proportion (45%) of EDTS was observed, and the problem was significantly greater in participants from professional courses. A probability of association of EDTS with coffee/tea consumption, alcohol consumption and smoking was also observed in the study. Copyright © 2016 Elsevier B.V. All rights reserved.

  4. Breastfeeding intentions, patterns, and determinants in infants visiting hospitals in La Paz, Bolivia.

    PubMed

    Ludvigsson, Jonas F

    2003-06-22

    Recent ecological research from Latin America has shown that infant health could be promoted through exclusive breastfeeding in infants aged 0-3 months and partial breastfeeding throughout the remainder of infancy. In a cross-sectional study in 1995, the author interviewed 518 mothers with infants leq; 1 year in La Paz, Bolivia, to describe the breastfeeding pattern and its determinants including socio-economic, religious and ethnic background. The rate of any breastfeeding remained above 85% during the first year. Exclusive breastfeeding rates fell from 89% at one week of age to 45% as early as one month of age, and then gradually declined to 20-25% in 6-month-old infants. The overall exclusive breastfeeding rate in infants < 4 months was 46% (n = 246). The use of prelacteal feeds (p < 0.0001, n = 436), not feeding the infant colostrum (p = 0.0008, n = 436), and Latin ethnicity (p = 0.0091, n = 436) were associated with a shorter duration of exclusive breastfeeding. Rural mothers were four times more likely to discard the colostrum than urban mothers (p = 0.0110, n = 501). Actual exclusive breastfeeding duration was shorter than what the mothers reported to be the ideal duration of exclusive breastfeeding for the infant. The rate of exclusive breastfeeding in Bolivian infants fell rapidly during the first months of life. Avoidance of prelacteal feeding and use of colostrum were associated with improved breastfeeding patterns.

  5. Determination of crystal residence timescales in magma reservoirs by diffusion modeling of dendritic phosphorus zoning patterns in olivine

    NASA Astrophysics Data System (ADS)

    Chakraborty, S.; Potrafke, A.

    2016-12-01

    Deciphering the early stages of crystallization and the chronological evolution of phenocrysts in magma reservoirs is one of the main goals in volcanology. Established approaches that model the concentration evolution of fast diffusing elements like Fe/Mg carry limited information on timescales once the concentration gradients are homogenized. Elements that diffuse more slowly, such as P and Al, become useful in these cases. We present a novel modeling tool that combines high-resolution EMP mapping of slow diffusing phosphorus in olivine with 2D kinetic modeling of the diffusive relaxation of initial chemical zoning pattern of P as well as Fe/Mg. The modeling approach offers a new possibility for determining crystal residence times in magma reservoirs. P diffusion coefficients from the experimental determination of [1] and Fe/Mg diffusion coefficients from [2] were used. The method yields a time-bracket between the minimum time required to homogenize the zoning of fast-diffusing Fe/Mg and the maximum time period for which details of chemical zoning of slow-diffusing P may be retained. To illustrate the approach we have studied the compositional zoning patterns of 7 olivine crystals from Piton de la Fournaise volcano, La Réunion. All crystals show a narrow range of forsterite contents (=Fo82-84) with fully homogenized Fe/Mg distribution, whereas P-mapping reveals oscillatory to dendritic zoning patterns [3]. P concentrations scatter in the range of 0.4 wt-% to below detection limit. Revealed phosphorus zoning patterns were considered to display the initial crystal architecture, whereas Fe and Mg zoning has been wiped out due to faster diffusion. For La Réunion magmas at 1453 K, timescales between few days to weeks were determined to be the time brackets for growth and residence of the olivine crystals in the magmas. These short residence times combined with knowledge of very fast developing dendritic crystals that have recently been revealed worldwide [e.g. 3

  6. Improving BeiDou precise orbit determination using observations of onboard MEO satellite receivers

    NASA Astrophysics Data System (ADS)

    Ge, Haibo; Li, Bofeng; Ge, Maorong; Shen, Yunzhong; Schuh, Harald

    2017-12-01

    In recent years, the precise orbit determination (POD) of the regional Chinese BeiDou Navigation Satellite System (BDS) has been a hot spot because of its special constellation consisting of five geostationary earth orbit (GEO) satellites and five inclined geosynchronous satellite orbit (IGSO) satellites besides four medium earth orbit (MEO) satellites since the end of 2012. GEO and IGSO satellites play an important role in regional BDS applications. However, this brings a great challenge to the POD, especially for the GEO satellites due to their geostationary orbiting. Though a number of studies have been carried out to improve the POD performance of GEO satellites, the result is still much worse than that of IGSO and MEO, particularly in the along-track direction. The major reason is that the geostationary characteristic of a GEO satellite results in a bad geometry with respect to the ground tracking network. In order to improve the tracking geometry of the GEO satellites, a possible strategy is to mount global navigation satellite system (GNSS) receivers on MEO satellites to collect the signals from GEO/IGSO GNSS satellites so as that these observations can be used to improve GEO/IGSO POD. We extended our POD software package to simulate all the related observations and to assimilate the MEO-onboard GNSS observations in orbit determination. Based on GPS and BDS constellations, simulated studies are undertaken for various tracking scenarios. The impact of the onboard GNSS observations is investigated carefully and presented in detail. The results show that MEO-onboard observations can significantly improve the orbit precision of GEO satellites from metres to decimetres, especially in the along-track direction. The POD results of IGSO satellites also benefit from the MEO-onboard data and the precision can be improved by more than 50% in 3D direction.

  7. Simultaneous observation of the quantization and the interference pattern of a plasmonic near-field

    DOE PAGES

    Piazza, L.; Lummen, T. T. A.; Quiñonez, E.; ...

    2015-03-02

    Surface plasmon polaritons can confine electromagnetic fields in subwavelength spaces and are of interest for photonics, optical data storage devices and biosensing applications. In analogy to photons, they exhibit wave–particle duality, whose different aspects have recently been observed in separate tailored experiments. Here we demonstrate the ability of ultrafast transmission electron microscopy to simultaneously image both the spatial interference and the quantization of such confined plasmonic fields. Our experiments are accomplished by spatiotemporally overlapping electron and light pulses on a single nanowire suspended on a graphene film. The resulting energy exchange between single electrons and the quanta of the photoinducedmore » near-field is imaged synchronously with its spatial interference pattern. In conclusion, this methodology enables the control and visualization of plasmonic fields at the nanoscale, providing a promising tool for understanding the fundamental properties of confined electromagnetic fields and the development of advanced photonic circuits.« less

  8. Simultaneous observation of the quantization and the interference pattern of a plasmonic near-field

    PubMed Central

    Piazza, L; Lummen, T.T.A.; Quiñonez, E; Murooka, Y; Reed, B.W.; Barwick, B; Carbone, F

    2015-01-01

    Surface plasmon polaritons can confine electromagnetic fields in subwavelength spaces and are of interest for photonics, optical data storage devices and biosensing applications. In analogy to photons, they exhibit wave–particle duality, whose different aspects have recently been observed in separate tailored experiments. Here we demonstrate the ability of ultrafast transmission electron microscopy to simultaneously image both the spatial interference and the quantization of such confined plasmonic fields. Our experiments are accomplished by spatiotemporally overlapping electron and light pulses on a single nanowire suspended on a graphene film. The resulting energy exchange between single electrons and the quanta of the photoinduced near-field is imaged synchronously with its spatial interference pattern. This methodology enables the control and visualization of plasmonic fields at the nanoscale, providing a promising tool for understanding the fundamental properties of confined electromagnetic fields and the development of advanced photonic circuits. PMID:25728197

  9. Determination of variations of the solar radius from solar eclipse observations

    NASA Technical Reports Server (NTRS)

    Sofia, S.; Dunham, D. W.; Fiala, A. D.

    1980-01-01

    This paper describes the method to determine the solar radius and its variations from observations made during total solar eclipses. In particular, the procedure to correct the spherical moon predictions for the effects of lunar mountains and valleys on the width and location of the path of totality is addressed in detail. The errors affecting this technique are addressed, a summary of the results of its application to three solar eclipses are presented, and the implications of the results on the constancy of the solar constant are described.

  10. Space based optical staring sensor LOS determination and calibration using GCPs observation

    NASA Astrophysics Data System (ADS)

    Chen, Jun; An, Wei; Deng, Xinpu; Yang, Jungang; Sha, Zhichao

    2016-10-01

    Line of sight (LOS) attitude determination and calibration is the key prerequisite of tracking and location of targets in space based infrared (IR) surveillance systems (SBIRS) and the LOS determination and calibration of staring sensor is one of the difficulties. This paper provides a novel methodology for removing staring sensor bias through the use of Ground Control Points (GCPs) detected in the background field of the sensor. Based on researching the imaging model and characteristics of the staring sensor of SBIRS geostationary earth orbit part (GEO), the real time LOS attitude determination and calibration algorithm using landmark control point is proposed. The influential factors (including the thermal distortions error, assemble error, and so on) of staring sensor LOS attitude error are equivalent to bias angle of LOS attitude. By establishing the observation equation of GCPs and the state transition equation of bias angle, and using an extend Kalman filter (EKF), the real time estimation of bias angle and the high precision sensor LOS attitude determination and calibration are achieved. The simulation results show that the precision and timeliness of the proposed algorithm meet the request of target tracking and location process in space based infrared surveillance system.

  11. SEARCH Workshop on Large-Scale Atmosphere/Cryosphere Observations

    NASA Technical Reports Server (NTRS)

    2002-01-01

    The purpose of the workshop held in Seattle during 27-29 November 2001 was to review existing land, sea ice, and atmospheric observations and the prospect for an Arctic System Reanalysis, through white papers, invited speakers, and panels. A major task for SEARCH was to determine how existing observation systems can be best used and enhanced to understand and anticipate the course of the ongoing changes in the Arctic. The primary workshop conclusion is that there is no cohesion among various Arctic disciplines and data types to form a complete observation set of Arctic change; a second workshop conclusion is that present data sets are vastly underutilized in understanding Arctic change; a third conclusion is that a distributed observing system must accommodate a wide range of spatial patterns of variability.

  12. Use of ecoacoustics to determine biodiversity patterns across ecological gradients.

    PubMed

    Grant, Paul B C; Samways, Michael J

    2016-12-01

    The variety of local animal sounds characterizes a landscape. We used ecoacoustics to noninvasively assess the species richness of various biotopes typical of an ecofriendly forest plantation with diverse ecological gradients and both nonnative and indigenous vegetation. The reference area was an adjacent large World Heritage Site protected area (PA). All sites were in a global biodiversity hotspot. Our results showed how taxa segregated into various biotopes. We identified 65 singing species, including birds, frogs, crickets, and katydids. Large, natural, protected grassland sites in the PA had the highest mean acoustic diversity (14.1 species/site). Areas covered in nonnative timber or grass species were devoid of acoustic species. Sites grazed by native and domestic megaherbivores were fairly rich (5.1) in acoustic species but none were unique to this habitat type, where acoustic diversity was greater than in intensively managed grassland sites (0.04). Natural vegetation patches inside the plantation mosaic supported high mean acoustic diversity (indigenous forests 7.6, grasslands 8.0, wetlands 9.1), which increased as plant heterogeneity and patch size increased. Indigenous forest patches within the plantation mosaic contained a highly characteristic acoustic species assemblage, emphasizing their complementary contribution to local biodiversity. Overall, acoustic signals determined spatial biodiversity patterns and can be a useful tool for guiding conservation. © 2016 Society for Conservation Biology.

  13. Understanding the persistence of measles: reconciling theory, simulation and observation.

    PubMed Central

    Keeling, Matt J; Grenfell, Bryan T

    2002-01-01

    Ever since the pattern of localized extinction associated with measles was discovered by Bartlett in 1957, many models have been developed in an attempt to reproduce this phenomenon. Recently, the use of constant infectious and incubation periods, rather than the more convenient exponential forms, has been presented as a simple means of obtaining realistic persistence levels. However, this result appears at odds with rigorous mathematical theory; here we reconcile these differences. Using a deterministic approach, we parameterize a variety of models to fit the observed biennial attractor, thus determining the level of seasonality by the choice of model. We can then compare fairly the persistence of the stochastic versions of these models, using the 'best-fit' parameters. Finally, we consider the differences between the observed fade-out pattern and the more theoretically appealing 'first passage time'. PMID:11886620

  14. Adenocarcinoma predominant pattern subtyping and nuclear grading in cytology: Is there a role in prognostication of advanced pulmonary adenocarcinomas?

    PubMed

    Nambirajan, A; Kaur, H; Jangra, K; Kaur, K; Madan, K; Mathur, S R; Iyer, V K; Jain, D

    2018-04-01

    Primary lung adenocarcinomas (ADs) show varied architectural patterns, and pattern-based subtyping of ADs is currently recommended due to prognostic implications. Predicting AD patterns on cytology is challenging; however, cytological nuclear features appear to correlate with histological grade and survival in early stage lung ADs. The feasibility and value of AD pattern prediction and nuclear grading on cytology in advanced lung ADs is not known. We aimed to predict patterns and analyse nuclear features on cytology and evaluate their role in prognostication. One-hundred patients of Stage III/IV lung AD with available matched cytology and histology samples were included. Cyto-patterns based on cell arrangement patterns (flat sheets vs three-dimensional clusters vs papillae) and cyto-nuclear score based on nuclear features (size, shape, contour), nucleoli (macronucleoli vs prominent vs inconspicuous), and nuclear chromatin were determined, and correlated with predominant histological-pattern observed on the matched small biopsy and outcome. Higher cyto-nuclear scores were observed with high-grade histo-patterns (solid, micropapillary and cribriform), while the predicted cyto-patterns did not correspond to the predominant pattern on histology in 77% cases. Highest cyto-histo agreement was observed for solid pattern (72%). High grade histo-patterns and cyto-nuclear scores > 3 showed a trend towards inferior survival (not significant). Nuclear grade scoring on cytology is simple to perform, and is predictive of high grade patterns. Its inclusion in routine reporting of cytology samples of lung ADs may be valuable. © 2018 John Wiley & Sons Ltd.

  15. Patterns of Knowledge Construction

    ERIC Educational Resources Information Center

    Chang, Bo

    2018-01-01

    The purpose of this study was to identify knowledge construction patterns in a local learning community. Observation, documents, and semistructured interviews were employed to collect data. Twenty learners were interviewed. Data were analyzed inductively using the constant comparative method. Five major patterns--radiation, circulation,…

  16. A method for the determination of potentially profitable service patterns for commuter air carriers

    NASA Technical Reports Server (NTRS)

    Ransone, R. K.; Kuhlthau, A. R.; Deptula, D. A.

    1975-01-01

    A methodology for estimating market conception was developed as a part of the short-haul air transportation program. It is based upon an analysis of actual documents which provide a record of known travel history. Applying this methodology a forecast was made of the demand for an air feeder service between Charlottesville, Virginia and Dulles International Airport. Local business travel vouchers and local travel agent records were selected to provide the documentation. The market was determined to be profitable for an 8-passenger Cessna 402B aircraft flying a 2-hour daily service pattern designed to mesh to the best extent possible with the connecting schedules at Dulles. The Charlottesville - Dulles air feeder service market conception forecast and its methodology are documented.

  17. Scheduling observational and physical practice: influence on the coding of simple motor sequences.

    PubMed

    Ellenbuerger, Thomas; Boutin, Arnaud; Blandin, Yannick; Shea, Charles H; Panzer, Stefan

    2012-01-01

    The main purpose of the present experiment was to determine the coordinate system used in the development of movement codes when observational and physical practice are scheduled across practice sessions. The task was to reproduce a 1,300-ms spatial-temporal pattern of elbow flexions and extensions. An intermanual transfer paradigm with a retention test and two effector (contralateral limb) transfer tests was used. The mirror effector transfer test required the same pattern of homologous muscle activation and sequence of limb joint angles as that performed or observed during practice, and the non-mirror effector transfer test required the same spatial pattern movements as that performed or observed. The test results following the first acquisition session replicated the findings of Gruetzmacher, Panzer, Blandin, and Shea (2011) . The results following the second acquisition session indicated a strong advantage for participants who received physical practice in both practice sessions or received observational practice followed by physical practice. This advantage was found on both the retention and the mirror transfer tests compared to the non-mirror transfer test. These results demonstrate that codes based in motor coordinates can be developed relatively quickly and effectively for a simple spatial-temporal movement sequence when participants are provided with physical practice or observation followed by physical practice, but physical practice followed by observational practice or observational practice alone limits the development of codes based in motor coordinates.

  18. Helicity patterns on the Sun

    NASA Astrophysics Data System (ADS)

    Pevtsov, A.

    Solar magnetic fields exhibit hemispheric preference for negative (pos- itive) helicity in northern (southern) hemisphere. The hemispheric he- licity rule, however, is not very strong, - the patterns of opposite sign helicity were observed on different spatial scales in each hemisphere. For instance, many individual sunspots exhibit patches of opposite he- licity inside the single polarity field. There are also helicity patterns on scales larger than the size of typical active region. Such patterns were observed in distribution of active regions with abnormal (for a give hemisphere) helicity, in large-scale photospheric magnetic fields and coronal flux systems. We will review the observations of large-scale pat- terns of helicity in solar atmosphere and their possible relationship with (sub-)photospheric processes. The emphasis will be on large-scale pho- tospheric magnetic field and solar corona.

  19. Phyllotactic pattern and stem cell fate are determined by the Arabidopsis homeobox gene BELLRINGER

    Treesearch

    Mary E. Byrne; Andrew T. Groover; Joseph R. Fontana; Robert A. Martienssen

    2003-01-01

    Lateral organs in plants arise from the meristem in a stereotypical pattern known as phyllotaxy. Spiral patterns result from initiation of successive organs at a fixed angle of divergence but variable patterns of physical contact. Such patterns ultimately give rise to individual leaves and flowers at positions related to each other by consecutive terms in the...

  20. Long-term determination of energetic electron precipitation into the atmosphere from AARDDVARK subionospheric VLF observations

    NASA Astrophysics Data System (ADS)

    Neal, Jason J.; Rodger, Craig J.; Clilverd, Mark A.; Thomson, Neil R.; Raita, Tero; Ulich, Thomas

    2015-03-01

    We analyze observations of subionospherically propagating very low frequency (VLF) radio waves to determine outer radiation belt energetic electron precipitation (EEP) flux magnitudes. The radio wave receiver in Sodankylä, Finland (Sodankylä Geophysical Observatory) observes signals from the transmitter with call sign NAA (Cutler, Maine). The receiver is part of the Antarctic-Arctic Radiation-belt Dynamic Deposition VLF Atmospheric Research Konsortia (AARDDVARK). We use a near-continuous data set spanning November 2004 until December 2013 to determine the long time period EEP variations. We determine quiet day curves over the entire period and use these to identify propagation disturbances caused by EEP. Long Wave Propagation Code radio wave propagation modeling is used to estimate the precipitating electron flux magnitudes from the observed amplitude disturbances, allowing for solar cycle changes in the ambient D region and dynamic variations in the EEP energy spectra. Our method performs well during the summer months when the daylit ionosphere is most stable but fails during the winter. From the summer observations, we have obtained 693 days worth of hourly EEP flux magnitudes over the 2004-2013 period. These AARDDVARK-based fluxes agree well with independent satellite precipitation measurements during high-intensity events. However, our method of EEP detection is 10-50 times more sensitive to low flux levels than the satellite measurements. Our EEP variations also show good agreement with the variation in lower band chorus wave powers, providing some confidence that chorus is the primary driver for the outer belt precipitation we are monitoring.

  1. Observing Consistency in Online Communication Patterns for User Re-Identification

    PubMed Central

    Venter, Hein S.

    2016-01-01

    Comprehension of the statistical and structural mechanisms governing human dynamics in online interaction plays a pivotal role in online user identification, online profile development, and recommender systems. However, building a characteristic model of human dynamics on the Internet involves a complete analysis of the variations in human activity patterns, which is a complex process. This complexity is inherent in human dynamics and has not been extensively studied to reveal the structural composition of human behavior. A typical method of anatomizing such a complex system is viewing all independent interconnectivity that constitutes the complexity. An examination of the various dimensions of human communication pattern in online interactions is presented in this paper. The study employed reliable server-side web data from 31 known users to explore characteristics of human-driven communications. Various machine-learning techniques were explored. The results revealed that each individual exhibited a relatively consistent, unique behavioral signature and that the logistic regression model and model tree can be used to accurately distinguish online users. These results are applicable to one-to-one online user identification processes, insider misuse investigation processes, and online profiling in various areas. PMID:27918593

  2. Observing Consistency in Online Communication Patterns for User Re-Identification.

    PubMed

    Adeyemi, Ikuesan Richard; Razak, Shukor Abd; Salleh, Mazleena; Venter, Hein S

    2016-01-01

    Comprehension of the statistical and structural mechanisms governing human dynamics in online interaction plays a pivotal role in online user identification, online profile development, and recommender systems. However, building a characteristic model of human dynamics on the Internet involves a complete analysis of the variations in human activity patterns, which is a complex process. This complexity is inherent in human dynamics and has not been extensively studied to reveal the structural composition of human behavior. A typical method of anatomizing such a complex system is viewing all independent interconnectivity that constitutes the complexity. An examination of the various dimensions of human communication pattern in online interactions is presented in this paper. The study employed reliable server-side web data from 31 known users to explore characteristics of human-driven communications. Various machine-learning techniques were explored. The results revealed that each individual exhibited a relatively consistent, unique behavioral signature and that the logistic regression model and model tree can be used to accurately distinguish online users. These results are applicable to one-to-one online user identification processes, insider misuse investigation processes, and online profiling in various areas.

  3. A host-endoparasite network of Neotropical marine fish: are there organizational patterns?

    PubMed

    Bellay, Sybelle; Lima, Dilermando P; Takemoto, Ricardo M; Luque, José L

    2011-12-01

    Properties of ecological networks facilitate the understanding of interaction patterns in host-parasite systems as well as the importance of each species in the interaction structure of a community. The present study evaluates the network structure, functional role of all species and patterns of parasite co-occurrence in a host-parasite network to determine the organization level of a host-parasite system consisting of 170 taxa of gastrointestinal metazoans of 39 marine fish species on the coast of Brazil. The network proved to be nested and modular, with a low degree of connectance. Host-parasite interactions were influenced by host phylogeny. Randomness in parasite co-occurrence was observed in most modules and component communities, although species segregation patterns were also observed. The low degree of connectance in the network may be the cause of properties such as nestedness and modularity, which indicate the presence of a high number of peripheral species. Segregation patterns among parasite species in modules underscore the role of host specificity. Knowledge of ecological networks allows detection of keystone species for the maintenance of biodiversity and the conduction of further studies on the stability of networks in relation to frequent environmental changes.

  4. How temporal patterns in rainfall determine the geomorphology and carbon fluxes of tropical peatlands.

    PubMed

    Cobb, Alexander R; Hoyt, Alison M; Gandois, Laure; Eri, Jangarun; Dommain, René; Abu Salim, Kamariah; Kai, Fuu Ming; Haji Su'ut, Nur Salihah; Harvey, Charles F

    2017-06-27

    Tropical peatlands now emit hundreds of megatons of carbon dioxide per year because of human disruption of the feedbacks that link peat accumulation and groundwater hydrology. However, no quantitative theory has existed for how patterns of carbon storage and release accompanying growth and subsidence of tropical peatlands are affected by climate and disturbance. Using comprehensive data from a pristine peatland in Brunei Darussalam, we show how rainfall and groundwater flow determine a shape parameter (the Laplacian of the peat surface elevation) that specifies, under a given rainfall regime, the ultimate, stable morphology, and hence carbon storage, of a tropical peatland within a network of rivers or canals. We find that peatlands reach their ultimate shape first at the edges of peat domes where they are bounded by rivers, so that the rate of carbon uptake accompanying their growth is proportional to the area of the still-growing dome interior. We use this model to study how tropical peatland carbon storage and fluxes are controlled by changes in climate, sea level, and drainage networks. We find that fluctuations in net precipitation on timescales from hours to years can reduce long-term peat accumulation. Our mathematical and numerical models can be used to predict long-term effects of changes in temporal rainfall patterns and drainage networks on tropical peatland geomorphology and carbon storage.

  5. How temporal patterns in rainfall determine the geomorphology and carbon fluxes of tropical peatlands

    PubMed Central

    Hoyt, Alison M.; Gandois, Laure; Eri, Jangarun; Dommain, René; Abu Salim, Kamariah; Kai, Fuu Ming; Haji Su’ut, Nur Salihah; Harvey, Charles F.

    2017-01-01

    Tropical peatlands now emit hundreds of megatons of carbon dioxide per year because of human disruption of the feedbacks that link peat accumulation and groundwater hydrology. However, no quantitative theory has existed for how patterns of carbon storage and release accompanying growth and subsidence of tropical peatlands are affected by climate and disturbance. Using comprehensive data from a pristine peatland in Brunei Darussalam, we show how rainfall and groundwater flow determine a shape parameter (the Laplacian of the peat surface elevation) that specifies, under a given rainfall regime, the ultimate, stable morphology, and hence carbon storage, of a tropical peatland within a network of rivers or canals. We find that peatlands reach their ultimate shape first at the edges of peat domes where they are bounded by rivers, so that the rate of carbon uptake accompanying their growth is proportional to the area of the still-growing dome interior. We use this model to study how tropical peatland carbon storage and fluxes are controlled by changes in climate, sea level, and drainage networks. We find that fluctuations in net precipitation on timescales from hours to years can reduce long-term peat accumulation. Our mathematical and numerical models can be used to predict long-term effects of changes in temporal rainfall patterns and drainage networks on tropical peatland geomorphology and carbon storage. PMID:28607068

  6. Arctic sea ice thickness loss determined using subsurface, aircraft, and satellite observations

    NASA Astrophysics Data System (ADS)

    Lindsay, R.; Schweiger, A.

    2014-08-01

    Sea ice thickness is a fundamental climate state variable that provides an integrated measure of changes in the high-latitude energy balance. However, observations of ice thickness have been sparse in time and space making the construction of observation-based time series difficult. Moreover, different groups use a variety of methods and processing procedures to measure ice thickness and each observational source likely has different and poorly characterized measurement and sampling biases. Observational sources include upward looking sonars mounted on submarines or moorings, electromagnetic sensors on helicopters or aircraft, and lidar or radar altimeters on airplanes or satellites. Here we use a curve-fitting approach to evaluate the systematic differences between eight different observation systems in the Arctic Basin. The approach determines the large-scale spatial and temporal variability of the ice thickness as well as the mean differences between the observation systems using over 3000 estimates of the ice thickness. The thickness estimates are measured over spatial scales of approximately 50 km or time scales of 1 month and the primary time period analyzed is 2000-2013 when the modern mix of observations is available. Good agreement is found between five of the systems, within 0.15 m, while systematic differences of up to 0.5 m are found for three others compared to the five. The trend in annual mean ice thickness over the Arctic Basin is -0.58 ± 0.07 m decade-1 over the period 2000-2013, while the annual mean ice thickness for the central Arctic Basin alone (the SCICEX Box) has decreased from 3.45 m in 1975 to 1.11 m in 2013, a 68% reduction. This is nearly double the 36% decline reported by an earlier study. These results provide additional direct observational confirmation of substantial sea ice losses found in model analyses.

  7. Genome-Wide Association Study of Dietary Pattern Scores

    PubMed Central

    Bouchard-Mercier, Annie; Rudkowska, Iwona; Lemieux, Simone; Couture, Patrick; Vohl, Marie-Claude

    2017-01-01

    Dietary patterns, representing global food supplies rather than specific nutrients or food intakes, have been associated with cardiovascular disease (CVD) incidence and mortality. The contribution of genetic factors in the determination of food intakes, preferences and dietary patterns has been previously established. The current study aimed to identify novel genetic factors associated with reported dietary pattern scores. Reported dietary patterns scores were derived from reported dietary intakes for the preceding month and were obtained through a food frequency questionnaire and genome-wide association study (GWAS) conducted in a study sample of 141 individuals. Reported Prudent and Western dietary patterns demonstrated nominal associations (p < 1 × 10−5) with 78 and 27 single nucleotide polymorphisms (SNPs), respectively. Among these, SNPs annotated to genes previously associated with neurological disorders, CVD risk factors and obesity were identified. Further assessment of SNPs demonstrated an impact on gene expression levels in blood for SNPs located within/near BCKDHB (p = 0.02) and the hypothalamic glucosensor PFKFB3 (p = 0.0004) genes, potentially mediated through an impact on the binding of transcription factors (TFs). Overrepresentations of glucose/energy homeostasis and hormone response TFs were also observed from SNP-surrounding sequences. Results from the current GWAS study suggest an interplay of genes involved in the metabolic response to dietary patterns on obesity, glucose metabolism and food-induced response in the brain in the adoption of dietary patterns. PMID:28644415

  8. 50 CFR 222.402 - Annual determination of fisheries to be observed; notice and comment.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 50 Wildlife and Fisheries 9 2011-10-01 2011-10-01 false Annual determination of fisheries to be observed; notice and comment. 222.402 Section 222.402 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS GENERAL...

  9. 50 CFR 222.402 - Annual determination of fisheries to be observed; notice and comment.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... 50 Wildlife and Fisheries 10 2012-10-01 2012-10-01 false Annual determination of fisheries to be observed; notice and comment. 222.402 Section 222.402 Wildlife and Fisheries NATIONAL MARINE FISHERIES SERVICE, NATIONAL OCEANIC AND ATMOSPHERIC ADMINISTRATION, DEPARTMENT OF COMMERCE MARINE MAMMALS GENERAL...

  10. Patterns and Determinants of Habitat Occupancy by the Asian Elephant in the Western Ghats of Karnataka, India

    PubMed Central

    Jathanna, Devcharan; Karanth, K. Ullas; Kumar, N. Samba; Karanth, Krithi K.; Goswami, Varun R.

    2015-01-01

    Understanding species distribution patterns has direct ramifications for the conservation of endangered species, such as the Asian elephant Elephas maximus. However, reliable assessment of elephant distribution is handicapped by factors such as the large spatial scales of field studies, survey expertise required, the paucity of analytical approaches that explicitly account for confounding observation processes such as imperfect and variable detectability, unequal sampling probability and spatial dependence among animal detections. We addressed these problems by carrying out ‘detection—non-detection’ surveys of elephant signs across a c. 38,000-km2 landscape in the Western Ghats of Karnataka, India. We analyzed the resulting sign encounter data using a recently developed modeling approach that explicitly addresses variable detectability across space and spatially dependent non-closure of occupancy, across sampling replicates. We estimated overall occupancy, a parameter useful to monitoring elephant populations, and examined key ecological and anthropogenic drivers of elephant presence. Our results showed elephants occupied 13,483 km2 (SE = 847 km2) corresponding to 64% of the available 21,167 km2 of elephant habitat in the study landscape, a useful baseline to monitor future changes. Replicate-level detection probability ranged between 0.56 and 0.88, and ignoring it would have underestimated elephant distribution by 2116 km2 or 16%. We found that anthropogenic factors predominated over natural habitat attributes in determining elephant occupancy, underscoring the conservation need to regulate them. Human disturbances affected elephant habitat occupancy as well as site-level detectability. Rainfall is not an important limiting factor in this relatively humid bioclimate. Finally, we discuss cost-effective monitoring of Asian elephant populations and the specific spatial scales at which different population parameters can be estimated. We emphasize the need to

  11. Point pattern analysis of FIA data

    Treesearch

    Chris Woodall

    2002-01-01

    Point pattern analysis is a branch of spatial statistics that quantifies the spatial distribution of points in two-dimensional space. Point pattern analysis was conducted on stand stem-maps from FIA fixed-radius plots to explore point pattern analysis techniques and to determine the ability of pattern descriptions to describe stand attributes. Results indicate that the...

  12. Large-Scale Constraint-Based Pattern Mining

    ERIC Educational Resources Information Center

    Zhu, Feida

    2009-01-01

    We studied the problem of constraint-based pattern mining for three different data formats, item-set, sequence and graph, and focused on mining patterns of large sizes. Colossal patterns in each data formats are studied to discover pruning properties that are useful for direct mining of these patterns. For item-set data, we observed robustness of…

  13. Computer-based classification of bacteria species by analysis of their colonies Fresnel diffraction patterns

    NASA Astrophysics Data System (ADS)

    Suchwalko, Agnieszka; Buzalewicz, Igor; Podbielska, Halina

    2012-01-01

    In the presented paper the optical system with converging spherical wave illumination for classification of bacteria species, is proposed. It allows for compression of the observation space, observation of Fresnel patterns, diffraction pattern scaling and low level of optical aberrations, which are not possessed by other optical configurations. Obtained experimental results have shown that colonies of specific bacteria species generate unique diffraction signatures. Analysis of Fresnel diffraction patterns of bacteria colonies can be fast and reliable method for classification and recognition of bacteria species. To determine the unique features of bacteria colonies diffraction patterns the image processing analysis was proposed. Classification can be performed by analyzing the spatial structure of diffraction patterns, which can be characterized by set of concentric rings. The characteristics of such rings depends on the bacteria species. In the paper, the influence of basic features and ring partitioning number on the bacteria classification, is analyzed. It is demonstrated that Fresnel patterns can be used for classification of following species: Salmonella enteritidis, Staplyococcus aureus, Proteus mirabilis and Citrobacter freundii. Image processing is performed by free ImageJ software, for which a special macro with human interaction, was written. LDA classification, CV method, ANOVA and PCA visualizations preceded by image data extraction were conducted using the free software R.

  14. The height variation of supergranular velocity fields determined from simultaneous OSO 8 satellite and ground-based observations

    NASA Technical Reports Server (NTRS)

    November, L. J.; Toomre, J.; Gebbie, K. B.; Simon, G. W.

    1979-01-01

    Results are reported for simultaneous satellite and ground-based observations of supergranular velocities in the sun, which were made using a UV spectrometer aboard OSO 8 and a diode-array instrument operating at the exit slit of an echelle spectrograph attached to a vacuum tower telescope. Observations of the steady Doppler velocities seen toward the limb in the middle chromosphere and the photosphere are compared; the observed spectral lines of Si II at 1817 A and Fe I at 5576 A are found to differ in height of formation by about 1400 km. The results show that supergranular motions are able to penetrate at least 11 density scale heights into the middle chromosphere, that the patterns of motion correlate well with the cellular structure seen in the photosphere, and that the motion increases from about 800 m/s in the photosphere to at least 3000 m/s in the middle chromosphere. These observations imply that supergranular velocities should be evident in the transition region and that strong horizontal shear layers in supergranulation should produce turbulence and internal gravity waves.

  15. Meteorological control of lower stratospheric minor species variations - An observational example

    NASA Technical Reports Server (NTRS)

    Alyea, F. N.; Cunnold, D. M.

    1978-01-01

    Lower stratospheric air trajectories entering the region over Alaska at the approximately 125 mb level during late May, 1975 indicate a substantial shift in the geographical source regions for the air masses present during that time. This shift coincides with an approximately 25% decrease in the observed halocarbon mixing ratios at the 125 mb level as determined from a daily sequence of halocarbon profiles. Since the halocarbon species measured are essentially chemically inactive at this level, the observed variation is linked to the changing meteorological pattern.

  16. Establishment of spatial pattern.

    PubMed

    Slack, Jonathan

    2014-01-01

    An overview and perspective are presented of mechanisms for the development of spatial pattern in animal embryos. It is intended both for new entrants to developmental biology and for specialists in other fields, with only a basic knowledge of animal life cycles being required. The first event of pattern formation is normally the localization of a cytoplasmic determinant in the egg, either during oogenesis or post-fertilization. Following cleavage to a multicellular stage, some cells contain the determinant and others do not. The determinant confers a specific developmental pathway on the cells that contain it, often making them the source of the first extracellular signal, or inducing factor. Inducing factors often form concentration gradients to which cells respond by up or downregulating genes at various concentration thresholds. This enables an initial situation consisting of two cell states (with or without the determinant) to generate a multistate pattern. Multiple rounds of gradient signaling, interspersed with phases of morphogenetic movements, can generate a complex pattern using a small number of signals and responding genes. Development proceeds in a hierarchical manner, with broad body subdivisions being specified initially, and becoming successively subdivided to give individual organs and tissues composed of multiple cell types in a characteristic arrangement. Double gradient models can account for embryonic regulation, whereby a similarly proportioned body pattern is formed following removal of material. Processes that are involved at the later stages include the formation of repeating structures by the combination of an oscillator with a gradient, and the formation of tissues with one cell type scattered in a background of another through a process called lateral inhibition. This set of processes make up a 'developmental toolkit' which can be deployed in various sequences and combinations to generate a very wide variety of structures and cell types

  17. Arctic sea ice thickness loss determined using subsurface, aircraft, and satellite observations

    NASA Astrophysics Data System (ADS)

    Lindsay, R.; Schweiger, A.

    2015-02-01

    Sea ice thickness is a fundamental climate state variable that provides an integrated measure of changes in the high-latitude energy balance. However, observations of mean ice thickness have been sparse in time and space, making the construction of observation-based time series difficult. Moreover, different groups use a variety of methods and processing procedures to measure ice thickness, and each observational source likely has different and poorly characterized measurement and sampling errors. Observational sources used in this study include upward-looking sonars mounted on submarines or moorings, electromagnetic sensors on helicopters or aircraft, and lidar or radar altimeters on airplanes or satellites. Here we use a curve-fitting approach to determine the large-scale spatial and temporal variability of the ice thickness as well as the mean differences between the observation systems, using over 3000 estimates of the ice thickness. The thickness estimates are measured over spatial scales of approximately 50 km or time scales of 1 month, and the primary time period analyzed is 2000-2012 when the modern mix of observations is available. Good agreement is found between five of the systems, within 0.15 m, while systematic differences of up to 0.5 m are found for three others compared to the five. The trend in annual mean ice thickness over the Arctic Basin is -0.58 ± 0.07 m decade-1 over the period 2000-2012. Applying our method to the period 1975-2012 for the central Arctic Basin where we have sufficient data (the SCICEX box), we find that the annual mean ice thickness has decreased from 3.59 m in 1975 to 1.25 m in 2012, a 65% reduction. This is nearly double the 36% decline reported by an earlier study. These results provide additional direct observational evidence of substantial sea ice losses found in model analyses.

  18. An Quantitative Analysis Method Of Trabecular Pattern In A Bone

    NASA Astrophysics Data System (ADS)

    Idesawa, Masanor; Yatagai, Toyohiko

    1982-11-01

    Orientation and density of trabecular pattern observed in a bone is closely related to its mechanical properties and deseases of a bone are appeared as changes of orientation and/or density distrbution of its trabecular patterns. They have been treated from a qualitative point of view so far because quantitative analysis method has not be established. In this paper, the authors proposed and investigated some quantitative analysis methods of density and orientation of trabecular patterns observed in a bone. These methods can give an index for evaluating orientation of trabecular pattern quantitatively and have been applied to analyze trabecular pattern observed in a head of femur and their availabilities are confirmed. Key Words: Index of pattern orientation, Trabecular pattern, Pattern density, Quantitative analysis

  19. Benthic macrofaunal colonization patterns and preservation of laminated sediments: Observations in an extreme coastal basin environment in the lower Gulf of California

    NASA Astrophysics Data System (ADS)

    Herguera, J.; Paull, C. K.; Anderson, K.; Gwiazda, R.; Lundsten, E. M.; Kundz, L.; Edwards, B. D.; McGann, M. L.

    2012-12-01

    New observations and cores obtained with the ROV Doc Ricketts operated from the RV/Western Flyer provide a glimpse into a macrofauna barren sea-floor where laminated sediments are known to accumulate on the sea-floor of Alfonso Basin. This basin, located north of La Paz Bay, Baja California, is known to be an important repository of laminated sediments due to a combination of the relatively high input of terrigenous sediments brought in by summer rains, a moderate to high export productivity from its surface waters, and the very low oxygen concentrations at depth bathed by tropical subsurface waters. These laminated sediments are unique repositories of paleoceanographic and paleoclimatic information for its very high resolution records of past conditions comparable to ice core, tree ring, coral and cave records although spanning continuously much further back in time. However, the paleoceanographic community rarely has had the opportunity to visualize the seafloor surface where these sediments are accumulating and examine the biological abundance patterns in these extreme environments. Here we will show results from ROV Doc Ricketts quantitative video transects providing benthic faunal abundance patterns on the seafloor in these highly oxygen depleted bottom waters. These observations are further compared with the underlying stratigraphy. A coring system carried on the ROV allowed us to replicate cores and to collect a transect of 5 closely spaced cores to evaluate the horizontal extent of the observed variability down-core. We will also show some preliminary results from x-radiographs showing the nature of the laminations and its sediment composition based on elemental analysis on organic carbon, carbonate and biogenic opal analysis. New XRF results from a box core will be used to calibrate its terrigenous components with the historical rainfall record and evaluate its potential to reconstruct summer precipitation patterns in this region.

  20. Temporal Patterns of Oak Mortality in a Southern Appalachian Forest (1991-2006).

    Treesearch

    Cathryn Greenberg; Tara L. Keyser; James Speer

    2011-01-01

    The sustainability of eastern oak-dominated forests is threatened by high oak mortality rates and widespread oak regeneration failure, and presents a challenge to natural area managers. We tracked the rate and cause of mortality of 287 mature oak trees of five species for 15 years to determine the temporal patterns and sources of mortality. We observed a 15.3% total...

  1. AN EXAMINATION OF DATA ON IOWA SCHOOL CHILDREN TO DETERMINE PATTERNS OF PERFORMANCE AND "DOWNSTREAM EFFECTS" OF EARLY DEPRESSED SCORES.

    ERIC Educational Resources Information Center

    FITZSIMMONS, STEPHEN J.

    VARIOUS PERFORMANCE PATTERNS WERE STUDIED TO DETERMINE IF EARLY LIMITED FAILURE LEADS TO GENERALIZED FAILURE IN A NUMBER OF AREAS. THE SUBJECTS, 258 DISADVANTAGED URBAN CHILDREN FROM FOUR SCHOOL DISTRICTS IN IOWA, HAD ONE OR MORE SCORES ON THE IOWA TEST OF BASIC SKILLS (ITBS) AT OR BELOW THE 33D PERCENTILE ON NATIONAL NORMS. THEIR PERFORMANCES ON…

  2. Association of serum vitamin D concentrations with dietary patterns in children and adolescents.

    PubMed

    Ganji, Vijay; Martineau, Bernadette; Van Fleit, William Edmund

    2018-06-04

    Because children have been advised on the dangers of sun exposure, diet is an important contributor of serum 25 hydroxyvitamin D [25(OH)D] concentrations. Aim of this study was to determine whether serum 25(OH)D concentrations were associated with any specific dietary patterns in US children. Data from 2 cycles of National Health and Nutrition Examination Survey (NHANES) 2003-2004 and 2005-2006 for individuals aged 2 to ≤19 y, were used to study relation between dietary patterns and serum 25(OH)D. We derived 2 major dietary patterns based on the food frequency questionnaire data. These were labeled as High-Fat-Low-Vegetable Dietary (HFLVD) pattern and Prudent Dietary (PD) pattern. In multivariate adjusted analysis, there was no significant relationship between serum 25(OH)D concentrations and tertiles of HFLVD and PD dietary pattern scores in all subjects, boys, and girls. When dietary patterns scores were used as a continuous variable in adjusted analysis, children (all) with higher PD contribution scores to overall diet showed a significant positive relation with serum 25(OH)D (β = 59.1, P = 0.017). When data were stratified by sex, a significant positive relation was observed in girls between serum 25(OH)D concentration and PD pattern scores (β = 82.1, P = 0.015). A significant negative relation was observed in girls between serum 25(OH)D and HFLVD pattern scores (β = - 88.5, P = 0.016). Overall, serum 25(OH)D were associated with PD pattern but not with HFLVD pattern in US children. In public health perspective, it is important to encourage children, especially girls who are consuming HFLVD pattern to shift to healthier diet.

  3. Legacy of Pre-Disturbance Spatial Pattern Determines Early Structural Diversity following Severe Disturbance in Montane Spruce Forests

    PubMed Central

    Bače, Radek; Svoboda, Miroslav; Janda, Pavel; Morrissey, Robert C.; Wild, Jan; Clear, Jennifer L.; Čada, Vojtěch; Donato, Daniel C.

    2015-01-01

    Background Severe canopy-removing disturbances are native to many temperate forests and radically alter stand structure, but biotic legacies (surviving elements or patterns) can lend continuity to ecosystem function after such events. Poorly understood is the degree to which the structural complexity of an old-growth forest carries over to the next stand. We asked how pre-disturbance spatial pattern acts as a legacy to influence post-disturbance stand structure, and how this legacy influences the structural diversity within the early-seral stand. Methods Two stem-mapped one-hectare forest plots in the Czech Republic experienced a severe bark beetle outbreak, thus providing before-and-after data on spatial patterns in live and dead trees, crown projections, down logs, and herb cover. Results Post-disturbance stands were dominated by an advanced regeneration layer present before the disturbance. Both major species, Norway spruce (Picea abies) and rowan (Sorbus aucuparia), were strongly self-aggregated and also clustered to former canopy trees, pre-disturbance snags, stumps and logs, suggesting positive overstory to understory neighbourhood effects. Thus, although the disturbance dramatically reduced the stand’s height profile with ~100% mortality of the canopy layer, the spatial structure of post-disturbance stands still closely reflected the pre-disturbance structure. The former upper tree layer influenced advanced regeneration through microsite and light limitation. Under formerly dense canopies, regeneration density was high but relatively homogeneous in height; while in former small gaps with greater herb cover, regeneration density was lower but with greater heterogeneity in heights. Conclusion These findings suggest that pre-disturbance spatial patterns of forests can persist through severe canopy-removing disturbance, and determine the spatial structure of the succeeding stand. Such patterns constitute a subtle but key legacy effect, promoting structural

  4. A conditional approach to determining the effect of anthropogenic climate change on very rare events.

    NASA Astrophysics Data System (ADS)

    Wehner, Michael; Pall, Pardeep; Zarzycki, Colin; Stone, Daithi

    2016-04-01

    Probabilistic extreme event attribution is especially difficult for weather events that are caused by extremely rare large-scale meteorological patterns. Traditional modeling techniques have involved using ensembles of climate models, either fully coupled or with prescribed ocean and sea ice. Ensemble sizes for the latter case ranges from several 100 to tens of thousand. However, even if the simulations are constrained by the observed ocean state, the requisite large-scale meteorological pattern may not occur frequently enough or even at all in free running climate model simulations. We present a method to ensure that simulated events similar to the observed event are modeled with enough fidelity that robust statistics can be determined given the large scale meteorological conditions. By initializing suitably constrained short term ensemble hindcasts of both the actual weather system and a counterfactual weather system where the human interference in the climate system is removed, the human contribution to the magnitude of the event can be determined. However, the change (if any) in the probability of an event of the observed magnitude is conditional not only on the state of the ocean/sea ice system but also on the prescribed initial conditions determined by the causal large scale meteorological pattern. We will discuss the implications of this technique through two examples; the 2013 Colorado flood and the 2014 Typhoon Haiyan.

  5. Betting Decision Under Break-Streak Pattern: Evidence from Casino Gaming.

    PubMed

    Fong, Lawrence Hoc Nang; So, Amy Siu Ian; Law, Rob

    2016-03-01

    Cognitive bias is prevalent among gamblers, especially those with gambling problems. Grounded in the heuristics theories, this study contributes to the literature by examining a cognitive bias triggered by the break streak pattern in the casino setting. We postulate that gamblers tend to bet on the latest outcome when there is a break-streak pattern. Moreover, three determinants of the betting decision under break-streak pattern, including the streak length of the alternative outcome, the frequency of the latest outcome, and gender, were identified and examined in this study. A non-participatory observational study was conducted among the Cussec gamblers in a casino in Macao. An analysis of 1229 bets confirms our postulation, particularly when the streak of the alternative outcome is long, the latest outcome is frequent, and the gamblers are females. The findings provide meaningful implications for casino management and public policymakers regarding the minimization of gambling harm.

  6. Application of Observing System Simulation Experiments (OSSEs) to determining science and user requirements for space-based missions

    NASA Astrophysics Data System (ADS)

    Atlas, R. M.

    2016-12-01

    Observing System Simulation Experiments (OSSEs) provide an effective method for evaluating the potential impact of proposed new observing systems, as well as for evaluating trade-offs in observing system design, and in developing and assessing improved methodology for assimilating new observations. As such, OSSEs can be an important tool for determining science and user requirements, and for incorporating these requirements into the planning for future missions. Detailed OSSEs have been conducted at NASA/ GSFC and NOAA/AOML in collaboration with Simpson Weather Associates and operational data assimilation centers over the last three decades. These OSSEs determined correctly the quantitative potential for several proposed satellite observing systems to improve weather analysis and prediction prior to their launch, evaluated trade-offs in orbits, coverage and accuracy for space-based wind lidars, and were used in the development of the methodology that led to the first beneficial impacts of satellite surface winds on numerical weather prediction. In this talk, the speaker will summarize the development of OSSE methodology, early and current applications of OSSEs and how OSSEs will evolve in order to enhance mission planning.

  7. Arctic Sea ice thickness loss determined using subsurface, aircraft, and satellite observations

    NASA Astrophysics Data System (ADS)

    Lindsay, R. W.; Schweiger, A. J. B.

    2014-12-01

    Sea ice thickness is a fundamental climate state variable. However, observations of ice thickness have been sparse in time and space making the construction of observation-based time series difficult. Moreover, different groups use a variety of methods and processing procedures to measure ice thickness and each observational source likely has different and poorly characterized measurement and sampling biases. Observational sources include upward looking sonars mounted on submarines or moorings, electromagnetic sensors on helicopters or aircraft, and lidar or radar altimeters on airplanes or satellites. Are these data sources now adequate so that we can construct time series of the mean sea ice thickness with meaningful information about thickness changes? How do the different measurement systems compare in the mean? Are there systematic differences? Very few of the observations provide overlapping measurements of ice of a variety of thickness classes or types for direct comparisons. Error characteristics may vary considerably depending on the presence or thickness of the ridged ice. Here we use a curve-fitting approach to evaluate the systematic differences between eight different observation systems in the Arctic Basin, including ICESat and IceBridge measurements. The approach determines the large-scale spatial and temporal variability of the ice thickness as well as the mean differences between the observation systems using over 3000 estimates of the ice thickness. The thickness estimates are measured over spatial scales of approximately 50 km or time scales of 1 month and the primary time period analyzed is 2000-2013 when the modern mix of observations is available. Good agreement is found between five of the systems, within 0.15 m, while systematic differences of up to 0.5 m are found for three others compare to the five. The annual mean ice thickness for the central Arctic Basin based on observations only has decreased from 3.45 m in 1975 to 1.11 m in 2013, a

  8. Coalescent patterns for chromosomal inversions in divergent populations

    PubMed Central

    Guerrero, Rafael F.; Rousset, François; Kirkpatrick, Mark

    2012-01-01

    Chromosomal inversions allow genetic divergence of locally adapted populations by reducing recombination between chromosomes with different arrangements. Divergence between populations (or hybridization between species) is expected to leave signatures in the neutral genetic diversity of the inverted region. Quantitative expectations for these patterns, however, have not been obtained. Here, we develop coalescent models of neutral sites linked to an inversion polymorphism in two locally adapted populations. We consider two scenarios of local adaptation: selection on the inversion breakpoints and selection on alleles inside the inversion. We find that ancient inversion polymorphisms cause genetic diversity to depart dramatically from neutral expectations. Other situations, however, lead to patterns that may be difficult to detect; important determinants are the age of the inversion and the rate of gene flux between arrangements. We also study inversions under genetic drift, finding that they produce patterns similar to locally adapted inversions of intermediate age. Our results are consistent with empirical observations, and provide the foundation for quantitative analyses of the roles that inversions have played in speciation. PMID:22201172

  9. Pattern-oriented modelling: a ‘multi-scope’ for predictive systems ecology

    PubMed Central

    Grimm, Volker; Railsback, Steven F.

    2012-01-01

    Modern ecology recognizes that modelling systems across scales and at multiple levels—especially to link population and ecosystem dynamics to individual adaptive behaviour—is essential for making the science predictive. ‘Pattern-oriented modelling’ (POM) is a strategy for doing just this. POM is the multi-criteria design, selection and calibration of models of complex systems. POM starts with identifying a set of patterns observed at multiple scales and levels that characterize a system with respect to the particular problem being modelled; a model from which the patterns emerge should contain the right mechanisms to address the problem. These patterns are then used to (i) determine what scales, entities, variables and processes the model needs, (ii) test and select submodels to represent key low-level processes such as adaptive behaviour, and (iii) find useful parameter values during calibration. Patterns are already often used in these ways, but a mini-review of applications of POM confirms that making the selection and use of patterns more explicit and rigorous can facilitate the development of models with the right level of complexity to understand ecological systems and predict their response to novel conditions. PMID:22144392

  10. Modeling and analyzing stripe patterns in fish skin

    NASA Astrophysics Data System (ADS)

    Zheng, Yibo; Zhang, Lei; Wang, Yuan; Liang, Ping; Kang, Junjian

    2009-11-01

    The formation mechanism of stripe patterns in the skin of tropical fishes has been investigated by a coupled two variable reaction diffusion model. Two types of spatial inhomogeneities have been introduced into a homogenous system. Several Turing modes pumped by the Turing instability give rise to a simple stripe pattern. It is found that the Turing mechanism can only determine the wavelength of stripe pattern. The orientation of stripe pattern is determined by the spatial inhomogeneity. Our numerical results suggest that it may be the most possible mechanism for the forming process of fish skin patterns.

  11. Determining the pattern of cementum annuli and relationship to reproduction in male sea otters

    USGS Publications Warehouse

    Proper, Josh; von Biela, Vanessa R.; Burns, Jennifer M.

    2007-01-01

    Since the early 1990s, the southwestern Alaskan sea otter (Enhydra lutris) population has declined dramatically and the cause has yet to be determined. Population trajectories of large mammals are determined by three factors: survival rate, reproduction rate, and age of first reproduction (AFR). Of these three, AFR should respond first to environmental change. Life history theory predicts that AFR will be older with bottom-up causes (ie, food limitation) and younger when the cause of the decline is top-down (ie, predation), as there is usually abundant resources in this scenario. Traditionally, determining AFR required lethal sampling, which may not always be possible. Work on many mammalian species suggests that the width of annual cementum layers in teeth may decline when breeding begins. If so, examining teeth annuli may provide a nonlethal alternative for determining AFR. Ongoing research has shown this relationship in female sea otters, but male sea otters have not been tested. Sea otter testes and premolar teeth slides were collected by subsistence hunters working with the US Fish and Wildlife Service and the Alaska Sea Otter and Steller Sea Lion Commission from Alaska (1994– 2005). We determined the pattern in cementum annuli thickness for male sea otters across age by measuring annuli at three sites on each of the two slide sections available. We found that cementum annuli layers decreased with age, but found no correlation between cementum annuli and sexual maturity in male sea otters. This lack of correlation may be due to sampling error or different energy expenditures during reproduction for each sex. Since females expend large amounts of energy through gestation and lactation, we hypothesize that the width of female cementum annuli decreases at a much sharper rate when they reach AFR.The southwest Alaskan sea otter population has plummeted up to 90% since the early 1990s and the reason is unknown.1 Declines may be due to a bottom-up source caused by

  12. Auditory Pattern Memory: Mechanisms of Tonal Sequence Discrimination by Human Observers

    DTIC Science & Technology

    1988-10-30

    and Creelman (1977) in a study of categorical perception. Tanner’s model included a short-term decaying memory for the acoustic input to the system plus...auditory pattern components, J. &Coust. Soc. 91 Am., 76, 1037- 1044. Macmillan, N. A., Kaplan H. L., & Creelman , C. D. (1977). The psychophysics of

  13. Kinematic gait patterns in healthy runners: A hierarchical cluster analysis.

    PubMed

    Phinyomark, Angkoon; Osis, Sean; Hettinga, Blayne A; Ferber, Reed

    2015-11-05

    Previous studies have demonstrated distinct clusters of gait patterns in both healthy and pathological groups, suggesting that different movement strategies may be represented. However, these studies have used discrete time point variables and usually focused on only one specific joint and plane of motion. Therefore, the first purpose of this study was to determine if running gait patterns for healthy subjects could be classified into homogeneous subgroups using three-dimensional kinematic data from the ankle, knee, and hip joints. The second purpose was to identify differences in joint kinematics between these groups. The third purpose was to investigate the practical implications of clustering healthy subjects by comparing these kinematics with runners experiencing patellofemoral pain (PFP). A principal component analysis (PCA) was used to reduce the dimensionality of the entire gait waveform data and then a hierarchical cluster analysis (HCA) determined group sets of similar gait patterns and homogeneous clusters. The results show two distinct running gait patterns were found with the main between-group differences occurring in frontal and sagittal plane knee angles (P<0.001), independent of age, height, weight, and running speed. When these two groups were compared to PFP runners, one cluster exhibited greater while the other exhibited reduced peak knee abduction angles (P<0.05). The variability observed in running patterns across this sample could be the result of different gait strategies. These results suggest care must be taken when selecting samples of subjects in order to investigate the pathomechanics of injured runners. Copyright © 2015 Elsevier Ltd. All rights reserved.

  14. Epicentral Determination from Macroseismic Data: Insights from Four Centuries of Observations (Invited)

    NASA Astrophysics Data System (ADS)

    Szeliga, W. M.; Martin, S.; Hough, S.; Bilham, R.

    2009-12-01

    A new compilation of more than 8300 newly interpreted intensity observations from 570 earthquakes on the Indian subcontinent between 1636 and 2009 provides a rich data base for examining the utility of recently developed methods for deriving magnitude and location from macroseismic data. Instrumentally determined locations and magnitudes are available for 144 of these earthquakes since 1900, and for a subset of these earthquakes we can calculate differences between instrumental- and intensity-derived parameters. Using a modification of the Bakun and Wentworth (1997) algorithm we find that epicenters determined from well-conditioned intensity distributions are typically within one fault length of those determined from instrumental data. This encouraging result, however, applies to fewer than one third of the events. For a larger number of earthquakes, intensity-derived epicenters are poorly constrained, due to scatter in intensity amplitude and/or to poor spatial coverage. This raises concerns about the accuracy of rupture parameters determined for pre-instrumental earthquakes in India and elsewhere. We find moreover, that where dense spatial intensity values are available, location is recovered reasonably well (e.g. Bhuj 2001, Kashmir 2005), but magnitude is over-estimated by as much as one magnitude unit. This suggests that epicentral locations for well-documented M>7 historical earthquakes might be relatively reliable, but their magnitude might be significantly inflated. The cause for these erroneous locations and magnitudes are examined and we outline the results of our search for numerical rules to determine whether a given set of intensities will provide accurate or misleading results.

  15. A comparison of the accuracy of patterns processed from an inlay casting wax, an auto-polymerized resin and a light-cured resin pattern material.

    PubMed

    Rajagopal, Praveen; Chitre, Vidya; Aras, Meena A

    2012-01-01

    Traditionally, inlay casting waxes have been used to fabricate patterns for castings. Newer resin pattern materials offer greater rigidity and strength, allowing easier laboratory and intraoral adjustment without the fear of pattern damage. They also claim to possess a greater dimensional stability when compared to inlay wax. This study attempted to determine and compare the marginal accuracy of patterns fabricated from an inlay casting wax, an autopolymerized pattern resin and a light polymerized pattern resin on storage off the die for varying time intervals. Ten patterns each were fabricated from an inlay casting wax (GC Corp., Tokyo, Japan), an autopolymerized resin pattern material (Pattern resin, GC Corp, Tokyo, Japan) and a light-cured resin pattern material (Palavit GLC, Hereaus Kulzer GmbH, Germany). The completed patterns were stored off the die at room temperature. Marginal gaps were evaluated by reseating the patterns on their respective dies and observing it under a stereomicroscope at 1, 12, and 24 h intervals after pattern fabrication. The results revealed that the inlay wax showed a significantly greater marginal discrepancy at the 12 and 24 h intervals. The autopolymerized resin showed an initial (at 1 h) marginal discrepancy slightly greater than inlay wax, but showed a significantly less marginal gap (as compared to inlay wax) at the other two time intervals. The light-cured resin proved to be significantly more dimensionally stable, and showed minimal change during the storage period. The resin pattern materials studied, undergo a significantly less dimensional change than the inlay waxes on prolonged storage. They would possibly be a better alternative to inlay wax in situations requiring high precision or when delayed investment (more than 1 h) of patterns can be expected.

  16. Airborne antenna pattern calculations

    NASA Technical Reports Server (NTRS)

    Knerr, T. J.; Mielke, R. R.

    1981-01-01

    Progress on the development of modeling software, testing software against caclulated data from program VPAP and measured patterns, and calculating roll plane patterns for general aviation aircraft is reported. Major objectives are the continued development of computer software for aircraft modeling and use of this software and program OSUVOL to calculate principal plane and volumetric radiation patterns. The determination of proper placement of antennas on aircraft to meet the requirements of the Microwave Landing System is discussed. An overview of the performed work, and an example of a roll plane model for the Piper PA-31T Cheyenne aircraft and the resulting calculated roll plane radiation pattern are included.

  17. Identification of General Patterns of Sex-Biased Expression in Daphnia, a Genus with Environmental Sex Determination

    PubMed Central

    Molinier, Cécile; Reisser, Céline M.O.; Fields, Peter; Ségard, Adeline; Galimov, Yan; Haag, Christoph R.

    2018-01-01

    Daphnia reproduce by cyclic-parthenogenesis, where phases of asexual reproduction are intermitted by sexual production of diapause stages. This life cycle, together with environmental sex determination, allow the comparison of gene expression between genetically identical males and females. We investigated gene expression differences between males and females in four genotypes of Daphnia magna and compared the results with published data on sex-biased gene expression in two other Daphnia species, each representing one of the major phylogenetic clades within the genus. We found that 42% of all annotated genes showed sex-biased expression in D. magna. This proportion is similar both to estimates from other Daphnia species as well as from species with genetic sex determination, suggesting that sex-biased expression is not reduced under environmental sex determination. Among 7453 single copy, one-to-one orthologs in the three Daphnia species, 707 consistently showed sex-biased expression and 675 were biased in the same direction in all three species. Hence these genes represent a core-set of genes with consistent sex-differential expression in the genus. A functional analysis identified that several of them are involved in known sex determination pathways. Moreover, 75% were overexpressed in females rather than males, a pattern that appears to be a general feature of sex-biased gene expression in Daphnia. PMID:29535148

  18. Identification of General Patterns of Sex-Biased Expression in Daphnia, a Genus with Environmental Sex Determination.

    PubMed

    Molinier, Cécile; Reisser, Céline M O; Fields, Peter; Ségard, Adeline; Galimov, Yan; Haag, Christoph R

    2018-05-04

    Daphnia reproduce by cyclic-parthenogenesis, where phases of asexual reproduction are intermitted by sexual production of diapause stages. This life cycle, together with environmental sex determination, allow the comparison of gene expression between genetically identical males and females. We investigated gene expression differences between males and females in four genotypes of Daphnia magna and compared the results with published data on sex-biased gene expression in two other Daphnia species, each representing one of the major phylogenetic clades within the genus. We found that 42% of all annotated genes showed sex-biased expression in D. magna This proportion is similar both to estimates from other Daphnia species as well as from species with genetic sex determination, suggesting that sex-biased expression is not reduced under environmental sex determination. Among 7453 single copy, one-to-one orthologs in the three Daphnia species, 707 consistently showed sex-biased expression and 675 were biased in the same direction in all three species. Hence these genes represent a core-set of genes with consistent sex-differential expression in the genus. A functional analysis identified that several of them are involved in known sex determination pathways. Moreover, 75% were overexpressed in females rather than males, a pattern that appears to be a general feature of sex-biased gene expression in Daphnia . Copyright © 2018 Molinier et al.

  19. Dynamics Explorer measurements of particles, fields, and plasma drifts over a horse-collar auroral pattern

    NASA Technical Reports Server (NTRS)

    Sharber, J. R.; Hones, E. W., Jr.; Heelis, R. A.; Craven, J. D.; Frank, L. A.; Maynard, N. C.; Slavin, J. A.; Birn, J.

    1992-01-01

    As shown from ground-based measurements and satellite-borne imagers, one type of global auroral pattern characteristic of quiet (usually northward IMF) intervals is that of a contracted but thickened emission region in which the dawn and dusk portions can spread poleward to very high latitudes, (the type of a pattern referred to as a 'horse-collar' aurora by Hones et al., 1989). In this report we use a DE data set to examine a case in which this horse-collar pattern was observed by the DE-1 auroral imager while at the same time the DE-2, at lower altitude, measured precipitating particles, electric and magnetic fields, and plasma drifts. There is close agreement between the optical signatures and the particle precipitation patterns. The particle, plasma, and field measurements made along the satellite track and the 2-D perspective of the imager provide a means of determining the configuration of convective flows in the high-latitude ionosphere during this interval of northward IMF. Recent mapping studies are used to relate the low-altitude observations to possible magnetospheric source regions.

  20. On the Determination of Poisson Statistics for Haystack Radar Observations of Orbital Debris

    NASA Technical Reports Server (NTRS)

    Stokely, Christopher L.; Benbrook, James R.; Horstman, Matt

    2007-01-01

    A convenient and powerful method is used to determine if radar detections of orbital debris are observed according to Poisson statistics. This is done by analyzing the time interval between detection events. For Poisson statistics, the probability distribution of the time interval between events is shown to be an exponential distribution. This distribution is a special case of the Erlang distribution that is used in estimating traffic loads on telecommunication networks. Poisson statistics form the basis of many orbital debris models but the statistical basis of these models has not been clearly demonstrated empirically until now. Interestingly, during the fiscal year 2003 observations with the Haystack radar in a fixed staring mode, there are no statistically significant deviations observed from that expected with Poisson statistics, either independent or dependent of altitude or inclination. One would potentially expect some significant clustering of events in time as a result of satellite breakups, but the presence of Poisson statistics indicates that such debris disperse rapidly with respect to Haystack's very narrow radar beam. An exception to Poisson statistics is observed in the months following the intentional breakup of the Fengyun satellite in January 2007.

  1. Unusual polarity-dependent patterns in a bent-core nematic liquid crystal under low-frequency ac field.

    PubMed

    Xiang, Ying; Zhou, Meng-jie; Xu, Ming-Ya; Salamon, Péter; Éber, Nándor; Buka, Ágnes

    2015-04-01

    Electric-field-induced patterns of diverse morphology have been observed over a wide frequency range in a recently synthesized bent-core nematic (BCN) liquid crystal. At low frequencies (up to ∼25 Hz), the BCN exhibited unusual polarity-dependent patterns. When the amplitude of the ac field was enhanced, these two time-asymmetrical patterns turned into time-symmetrical prewavylike stripes. At ac frequencies in the middle-frequency range (∼50-3000 Hz), zigzag patterns were detected whose obliqueness varied with the frequency. Finally, if the frequency was increased above 3 kHz, the zigzag pattern was replaced by another, prewavylike pattern, whose threshold voltage depended on the frequency; however, the wave vector did not. For a more complete characterization, material parameters such as elastic constants, dielectric permittivities, and the anisotropy of the diamagnetic susceptibility were also determined.

  2. Spatial patterns of correlated scale size and scale color in relation to color pattern elements in butterfly wings.

    PubMed

    Iwata, Masaki; Otaki, Joji M

    2016-02-01

    Complex butterfly wing color patterns are coordinated throughout a wing by unknown mechanisms that provide undifferentiated immature scale cells with positional information for scale color. Because there is a reasonable level of correspondence between the color pattern element and scale size at least in Junonia orithya and Junonia oenone, a single morphogenic signal may contain positional information for both color and size. However, this color-size relationship has not been demonstrated in other species of the family Nymphalidae. Here, we investigated the distribution patterns of scale size in relation to color pattern elements on the hindwings of the peacock pansy butterfly Junonia almana, together with other nymphalid butterflies, Vanessa indica and Danaus chrysippus. In these species, we observed a general decrease in scale size from the basal to the distal areas, although the size gradient was small in D. chrysippus. Scales of dark color in color pattern elements, including eyespot black rings, parafocal elements, and submarginal bands, were larger than those of their surroundings. Within an eyespot, the largest scales were found at the focal white area, although there were exceptional cases. Similarly, ectopic eyespots that were induced by physical damage on the J. almana background area had larger scales than in the surrounding area. These results are consistent with the previous finding that scale color and size coordinate to form color pattern elements. We propose a ploidy hypothesis to explain the color-size relationship in which the putative morphogenic signal induces the polyploidization (genome amplification) of immature scale cells and that the degrees of ploidy (gene dosage) determine scale color and scale size simultaneously in butterfly wings. Copyright © 2015 Elsevier Ltd. All rights reserved.

  3. Observability of global rivers with future SWOT observations

    NASA Astrophysics Data System (ADS)

    Fisher, Colby; Pan, Ming; Wood, Eric

    2017-04-01

    The Surface Water and Ocean Topography (SWOT) mission is designed to provide global observations of water surface elevation and slope from which river discharge can be estimated using a data assimilation system. This mission will provide increased spatial and temporal coverage compared to current altimeters, with an expected accuracy for water level elevations of 10 cm on rivers greater than 100 m wide. Within the 21-day repeat cycle, a river reach will be observed 2-4 times on average. Due to the relationship between the basin orientation and the orbit, these observations are not evenly distributed in time, which will impact the derived discharge values. There is, then, a need for a better understanding of how the mission will observe global river basins. In this study, we investigate how SWOT will observe global river basins and how the temporal and spatial sampling impacts the discharge estimated from assimilation. SWOT observations can be assimilated using the Inverse Streamflow Routing (ISR) model of Pan and Wood [2013] with a fixed interval Kalman smoother. Previous work has shown that the ISR assimilation method can be used to reproduce the spatial and temporal dynamics of discharge within many global basins: however, this performance was strongly impacted by the spatial and temporal availability of discharge observations. In this study, we apply the ISR method to 32 global basins with different geometries and crossing patterns for the future orbit, assimilating theoretical SWOT-retrieved "gauges". Results show that the model performance varies significantly across basins and is driven by the orientation, flow distance, and travel time in each. Based on these properties, we quantify the "observability" of each basin and relate this to the performance of the assimilation. Applying this metric globally to a large variety of basins we can gain a better understanding of the impact that SWOT observations may have across basin scales. By determining the

  4. An Assessment of Correlation between Dermatoglyphic Patterns and Sagittal Skeletal Discrepancies

    PubMed Central

    Philip, Biju; Madathody, Deepika; Mathew, Manu; Paul, Jose; Dlima, Johnson Prakash

    2017-01-01

    Introduction Investigators over years have been fascinated by dermatoglyphic patterns which has led to the development of dermatoglyphics as a science with numerous applications in various fields other than being the best and most widely used method for personal identification. Aim To assess the correlation between dermatoglyphic patterns and sagittal skeletal discrepancies. Materials and Methods A total of 180 patients, aged 18-40 years, were selected from those who attended the outpatient clinic of the Deparment of Orthodontics and Dentofacial Orthopedics, Mar Baselios Dental College, Kothamangalam, Kerala, India. The fingerprints of both hands were taken by ink and stamp method after proper hand washing. The patterns of arches, loops and whorls in fingerprints were assessed. The total ridge count was also evaluated. Data was also sent to the fingerprint experts for expert evaluation. The sagittal jaw relation was determined from the patient’s lateral cephalogram. The collected data was then statistically analyzed using Chi-square tests, ANOVA and Post-hoc tests and a Multinomial regression prediction was also done. Results A significant association was observed between the dermatoglyphic pattern exhibited by eight fingers and the sagittal skeletal discrepancies (p<0.05). An increased distribution of whorl pattern was observed in the skeletal Class II with maxillary excess group and skeletal Class II with mandibular deficiency group while an increased distribution of loop pattern was seen in the skeletal Class III with mandibular excess group and skeletal Class III with maxillary deficiency group. Higher mean of total ridge count was also seen in the groups of skeletal Class II with maxillary excess and skeletal Class II with mandibular deficiency. Multinomial regression predicting skeletal pattern with respect to the fingerprint pattern showed that the left thumb impression fits the best model for predicting the skeletal pattern. Conclusion There was a

  5. Dynamics Explorer measurements of particles, fields, and plasma drifts over a horse-collar auroral pattern

    NASA Technical Reports Server (NTRS)

    Sharber, J. R.; Hones, E. W., Jr.; Heelis, R. A.; Craven, J. D.; Frank, L. A.; Maynard, N. C.; Slavin, J. A.; Birn, J.

    1992-01-01

    As shown from ground-based measurements and satellite-borne imagers, one type of global auroral pattern characteristic of quiet (usually northward IMF) intervals is that of a contracted but thickened emission region of a pattern referred to as 'horse-collar' aurora (Hones et al., 1989). In this report we use the Dynamics Explorer data set to examine a case in which this horse-collar pattern was observed by the DE-1 auroral imager, while at the same time DE-2, at lower altitude, measured precipitating particles, electric and magnetic fields, and plasma drifts. Our analysis shows that, in general, there is close agreement between the optical signatures and the particle precipitation patterns. In many instances, over scales ranging from tens to a few hundred kilometers, electron precipitation features and upward field-aligned currents are observed at locations where the plasma flow gradients indicate negative V-average x E. The particle, plasma, and field measurements made along the satellite track and the 2D perspective of the imager provide a means of determining the configuration of convective flows in the high-latitude ionosphere during this interval of northward IMF. Recent mapping studies are used to relate the low-altitude observations to possible magnetospheric source regions.

  6. Smoking patterns, depression, and sociodemographic variables among Flemish women during pregnancy and the postpartum period.

    PubMed

    De Wilde, Katrien S; Trommelmans, Leen C; Laevens, Hans H; Maes, Lea R; Temmerman, Marleen; Boudrez, Hedwig L

    2013-01-01

    Relationships among feelings of depression, smoking behavior, and educational level during pregnancy have been documented. Feelings of depression may contribute to persistent smoking during pregnancy. No longitudinal studies assessing feelings of depression in women with different antepartum and postpartum smoking patterns are available. The aim was to determine relationships between depressive symptoms, sociodemographic characteristics, and smoking pattern during and after pregnancy. An observational, prospective, noninterventional study was conducted. Data were collected during two stages of pregnancy (T0: <;16 weeks and T1: 32-34 weeks) and postpartum (T2: >6 weeks) in 523 Flemish women. Feelings of depression (measured using the Beck Depression Inventory [BDI]), smoking behavior, and sociodemographic variables were analyzed using a general linear mixed model implemented in SAS Proc MIXED. Smokers and initial smokers reported significantly more depressive symptoms at all time points compared with recent ex-smokers, nonsmokers, and initial nonsmokers (p <; .001). The three-way interaction among time point, smoking pattern, and educational level was significant (p = .02). Evolution of mean BDI over time differed by educational level. Among participants with a secondary school certificate or less, differences were observed between smokers and nonsmokers, recent ex-smokers and initial nonsmokers, and nonsmokers and initial nonsmokers. Among participants with a college or university degree, no differences were observed. A wide variety of smoking patterns were observed during pregnancy and early postpartum. Smoking patterns were associated with depression and showed complex interactions with educational level. Assessment and intervention for both smoking and depression are needed throughout the perinatal period to support the health of mothers, their infants, and families.

  7. Faraday wave patterns on a square cell network

    NASA Astrophysics Data System (ADS)

    Peña-Polo, Franklin; Vargas, Carlos A.; Vásquez-González, Benjamín; Medina, Abraham; Trujillo, Leonardo; Klapp, Jaime; Sigalotti, Leonardo Di G.

    2017-05-01

    We present the experimental observations of the Faraday instability when the vibrated liquid is contained in a network of small square cells for exciting frequencies in the range 10≤ F≤ 24 Hz. A sweep of the parameter space has been performed to investigate the amplitudes and frequencies of the driving force for which different patterns form over the network. Regular patterns in the form of square lattices are observed for driving frequencies in the range 10≤ F<14 Hz, while ordered matrices of oscillons are formed for 1423 Hz, disordered periodic patterns appear within individual cells for a small range of amplitudes. In this case, the wave field is dominated by oscillating blobs that interact on the capillary-gravity scale. A Pearson correlation analysis of the recorded videos shows that for all ordered patterns, the surface waves are periodic and correspond to Faraday waves of dominant frequency equal to half the excitation frequency (i.e., f=F/2). In contrast, the oscillons formed for 1423 Hz are not subharmonic and correspond to periodic harmonic waves with f=nF/2 (for n=2,4,\\ldots ). We find that the experimentally determined minimum forcing necessary to destabilize the rest state and generate surface waves is consistent with a recent stability analysis of stationary solutions as derived from a new dispersion relation for time-periodic waves with nonzero forcing and dissipation.

  8. Myocardial architecture and patient variability in clinical patterns of atrial fibrillation

    NASA Astrophysics Data System (ADS)

    Manani, Kishan A.; Christensen, Kim; Peters, Nicholas S.

    2016-10-01

    Atrial fibrillation (AF) increases the risk of stroke by a factor of 4-5 and is the most common abnormal heart rhythm. The progression of AF with age, from short self-terminating episodes to persistence, varies between individuals and is poorly understood. An inability to understand and predict variation in AF progression has resulted in less patient-specific therapy. Likewise, it has been a challenge to relate the microstructural features of heart muscle tissue (myocardial architecture) with the emergent temporal clinical patterns of AF. We use a simple model of activation wave-front propagation on an anisotropic structure, mimicking heart muscle tissue, to show how variation in AF behavior arises naturally from microstructural differences between individuals. We show that the stochastic nature of progressive transversal uncoupling of muscle strands (e.g., due to fibrosis or gap junctional remodeling), as occurs with age, results in variability in AF episode onset time, frequency, duration, burden, and progression between individuals. This is consistent with clinical observations. The uncoupling of muscle strands can cause critical architectural patterns in the myocardium. These critical patterns anchor microreentrant wave fronts and thereby trigger AF. It is the number of local critical patterns of uncoupling as opposed to global uncoupling that determines AF progression. This insight may eventually lead to patient-specific therapy when it becomes possible to observe the cellular structure of a patient's heart.

  9. 50 CFR 222.402 - Annual determination of fisheries to be observed; notice and comment.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... ENDANGERED AND THREATENED MARINE SPECIES Observer Requirement § 222.402 Annual determination of fisheries to... Protection Act List of Fisheries in any given year, in accordance with 16 U.S.C. 1387, will serve as the... Protection Act List of Fisheries process as specified at 50 CFR 229.8. (e) Inclusion of a fishery in a...

  10. 50 CFR 222.402 - Annual determination of fisheries to be observed; notice and comment.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... ENDANGERED AND THREATENED MARINE SPECIES Observer Requirement § 222.402 Annual determination of fisheries to... Protection Act List of Fisheries in any given year, in accordance with 16 U.S.C. 1387, will serve as the... Protection Act List of Fisheries process as specified at 50 CFR 229.8. (e) Inclusion of a fishery in a...

  11. Antimicrobial resistance pattern in a tertiary care hospital: An observational study

    PubMed Central

    Saravanan, Revathy; Raveendaran, Vinod

    2013-01-01

    Context: The number of organisms developing resistance to commonly used antibiotics is increasing among the various generations. The exact national scenario of antimicrobial resistance (AMR) is not known in India owing to the absence of a central monitoring agency. Aims: The aim of this study is to identify the group of organisms developing resistance, to know the classes of drugs against, which resistance has emerged and to assess the possible factors that can favor the development of AMR so that antibiotic policy can be formulated for the proper and effective use of antibiotics. Settings and Design: An observational study was conducted for a period of 1 year from August 2011 to July 2012 in a tertiary care hospital in Pondicherry. Subjects and Methods: Data regarding culture and sensitivity of the organisms isolated from different sources such as urine, blood, wound swab/pus, stool, sputum and tracheal aspirations were collected from the records of the Microbiology Department. Sample processing, identification of organisms to the genus and/or species level and antimicrobial sensitivity were carried out as per the Clinical and Laboratory Standards Institute guidelines on the 999 samples received. Results: Out of 999 samples, 125 (12.5%) showed significant growth of organisms exhibiting resistance to either single or multiple drugs. Out of 84 (67.2%) in-patients and 41 (32.8%) out-patient samples, Escherichia was the most common organism isolated with a total of 41 (32.8%), followed by Methicillin sensitive Staphylococcus aureus, 26 (20.8%), Klebsiella 25 (20%), Methicillin resistant Staphylococcus aureus 17 (13.6%), Pseudomonas 10 (8%), Proteus 2 (1.6%), 1 (0.8%) each of Citrobacter and Enterococci. Maximum resistance was observed with commonly used first line antimicrobials such as co-trimoxazole, ampicillin, amoxicillin, amoxyclav, fluoroquinolones, third generation cephalosporins and nalidixic acid. Least resistant or highly sensitive were amikacin

  12. Time delay induced different synchronization patterns in repulsively coupled chaotic oscillators

    NASA Astrophysics Data System (ADS)

    Yao, Chenggui; Yi, Ming; Shuai, Jianwei

    2013-09-01

    Time delayed coupling plays a crucial role in determining the system's dynamics. We here report that the time delay induces transition from the asynchronous state to the complete synchronization (CS) state in the repulsively coupled chaotic oscillators. In particular, by changing the coupling strength or time delay, various types of synchronous patterns, including CS, antiphase CS, antiphase synchronization (ANS), and phase synchronization, can be generated. In the transition regions between different synchronous patterns, bistable synchronous oscillators can be observed. Furthermore, we show that the time-delay-induced phase flip bifurcation is of key importance for the emergence of CS. All these findings may light on our understanding of neuronal synchronization and information processing in the brain.

  13. Determining the Intensity of a Point-Like Source Observed on the Background of AN Extended Source

    NASA Astrophysics Data System (ADS)

    Kornienko, Y. V.; Skuratovskiy, S. I.

    2014-12-01

    The problem of determining the time dependence of intensity of a point-like source in case of atmospheric blur is formulated and solved by using the Bayesian statistical approach. A pointlike source is supposed to be observed on the background of an extended source with constant in time though unknown brightness. The equation system for optimal statistical estimation of the sequence of intensity values in observation moments is obtained. The problem is particularly relevant for studying gravitational mirages which appear while observing a quasar through the gravitational field of a far galaxy.

  14. Influence of Coral Community Structure and Thermal Stress Exposure on Observed Patterns of Bleaching across the Northern Mariana Islands

    NASA Astrophysics Data System (ADS)

    Johnston, L.; Heron, S. F.; Johnson, S.; Okano, R.; Benavente, D.; Iguel, J.; Perez, D. I.; Liu, G.; Geiger, E.; Eakin, C. M.

    2016-02-01

    In 2013 and 2014, the Mariana Archipelago experienced consecutive thermal stress events that resulted in widespread coral bleaching and mortality. Using in situ survey data collected across seven of the Northern Mariana Islands during the 2014 event, we undertook the first quantitative comparison between the National Oceanic and Atmospheric Administration's Coral Reef Watch 5 km satellite monitoring products and coral bleaching observations. Analysis of coral community characteristics, historical temperature conditions and thermal stress revealed a strong influence of coral biodiversity in the patterns of observed bleaching. This illustrates the importance of using local benthic characteristics to interpret the level of impact from thermal stress exposure. In an era of continuing climate change, accurate monitoring of thermal stress and prediction of coral bleaching are essential for resource managers and stakeholders to direct resources to the most effective management actions to conserve coral reefs.

  15. Investigating body patterning in aquarium-raised flamboyant cuttlefish (Metasepia pfefferi).

    PubMed

    Thomas, Amber; MacDonald, Christy

    2016-01-01

    Cuttlefish are known for their ability to quickly alter their total appearance, or body pattern, to camouflage or to communicate with predators, prey and conspecifics. The body patterns of some species have been extensively documented to gain a better understanding of their behaviors. However, the flamboyant cuttlefish (Metasepia pfefferi) is largely unstudied. Recently, aquarists have been able to breed, house and display M. pfefferi, giving researchers ample opportunities to study their behavior under those conditions. This study aimed to identify the dorsally-visible components of the body patterns used by 5 sexually-mature, freely-behaving, F5 generation M. pfefferi in their home aquarium at The Seas in Epcot at Walt Disney World Resorts(®), Lake Buena Vista, FL, USA. Furthermore, we aimed to determine the most probable patterns used by this population of animals and to create a database of components that can be used in future behavioral studies. We found that this population of M. pfefferi use a combination of 7 textural, 14 postural, 7 locomotor and between 42 and 75 chromatic components in their home aquarium. Using maximum likelihood analysis and AutoClass@IJM software, we found that these components combine to generate 11 distinct body patterns. The software was able to sort 98% of the live animal observations into one of the 11 patterns with 90% confidence and 88% of observations with 99% confidence. Unusually for cuttlefish, 8 of the 11 identified patterns contained at least one "traveling" component (i.e., traveling waves or blinking spots) in which the colors on the skin appeared to travel on the animal's mantle. In other species, these components are generally seen during hunting or aggression, but this population of M. pfefferi uses them frequently during a variety of contexts in their home aquarium. With few published data on the behavior of M. pfefferi in their natural environment, we cannot compare the behavior of the tank-raised individuals in

  16. Length and Geometric Patterns of the Greater Palatine Canal Observed in Cone Beam Computed Tomography

    PubMed Central

    Howard-Swirzinski, Karen; Edwards, Paul C.; Saini, Tarnjit S.; Norton, Neil S.

    2010-01-01

    The greater palatine canal is an important anatomical structure that is often utilized as a pathway for infiltration of local anesthesia to affect sensation and hemostasis. Increased awareness of the length and anatomic variation in the anatomy of this structure is important when performing surgical procedures in this area (e.g., placement of osseointegrated dental implants). We examined the anatomy of the greater palatine canal using data obtained from CBCT scans of 500 subjects. Both right and left canals were viewed (N = 1000) in coronal and sagittal planes, and their paths and lengths determined. The average length of the greater palatine canal was 29 mm (±3 mm), with a range from 22 to 40 mm. Coronally, the most common anatomic pattern consisted of the canal traveling inferior-laterally for a distance then directly inferior for the remainder (43.3%). In the sagittal view, the canal traveled most frequently at an anterior-inferior angle (92.9%). PMID:20871845

  17. Geostatistical analysis of allele presence patterns among American black bears in eastern North Carolina

    USGS Publications Warehouse

    Thompson, L.M.; Van Manen, F.T.; King, T.L.

    2005-01-01

    Highways are one of the leading causes of wildlife habitat fragmentation and may particularly affect wide-ranging species, such as American black bears (Ursus americanus). We initiated a research project in 2000 to determine potential effects of a 4-lane highway on black bear ecology in Washington County, North Carolina. The research design included a treatment area (highway construction) and a control area and a pre- and post-construction phase. We used data from the pre-construction phase to determine whether we could detect scale dependency or directionality among allele occurrence patterns using geostatistics. Detection of such patterns could provide a powerful tool to measure the effects of landscape fragmentation on gene flow. We sampled DNA from roots of black bear hair at 70 hair-sampling sites on each study area for 7 weeks during fall of 2000. We used microsatellite analysis based on 10 loci to determine unique multi-locus genotypes. We examined all alleles sampled at ???25 sites on each study area and mapped their presence or absence at each hair-sample site. We calculated semivariograms, which measure the strength of statistical correlation as a function of distance, and adjusted them for anisotropy to determine the maximum direction of spatial continuity. We then calculated the mean direction of spatial continuity for all examined alleles. The mean direction of allele frequency variation was 118.3?? (SE = 8.5) on the treatment area and 172.3?? (SE = 6.0) on the control area. Rayleigh's tests showed that these directions differed from random distributions (P = 0.028 and P < 0.001, respectively), indicating consistent directional patterns for the alleles we examined in each area. Despite the small spatial scale of our study (approximately 11,000 ha for each study area), we observed distinct and consistent patterns of allele occurrence, suggesting different directions of gene flow between the study areas. These directions seemed to coincide with the

  18. Evolution in the lineament patterns associated to strong earthquakes revealed by satellite observations

    NASA Astrophysics Data System (ADS)

    Soto-Pinto, C. A.; Arellano-Baeza, A. A.; Ouzounov, D. P.

    2011-12-01

    We study the temporal evolution of the stress patterns in the crust by using high-resolution (10-300 m) satellite images from MODIS and ASTER satellite sensors. We are able to detect some changes in density and orientation of lineaments preceding earthquake events. A lineament is generally defined as a straight or a somewhat curved feature in the landscape visible in a satellite image as an aligned sequence of pixels of a contrasting intensity compared to the background. The system of lineaments extracted from the satellite images is not identical to the geological lineaments; nevertheless, it generally reflects the structure of the faults and fractures in the Earth's crust. Our analysis has shown that the system of lineaments is very dynamical, and the significant number of lineaments appeared approximately one month before an earthquake, while one month after the earthquake the lineament configuration returned to its initial state. These features were not observed in the test areas that are free of any seismic activity in that period (null hypothesis). We have designed a computational prototype capable to detect lineament evolution and to utilize both ASTER and MODIS satellite L1/L2. We will demonstrate the first successful test results for several Mw> 5 earthquakes in Chile, Peru, China, and California (USA).

  19. Effect of inhibitory firing pattern on coherence resonance in random neural networks

    NASA Astrophysics Data System (ADS)

    Yu, Haitao; Zhang, Lianghao; Guo, Xinmeng; Wang, Jiang; Cao, Yibin; Liu, Jing

    2018-01-01

    The effect of inhibitory firing patterns on coherence resonance (CR) in random neuronal network is systematically studied. Spiking and bursting are two main types of firing pattern considered in this work. Numerical results show that, irrespective of the inhibitory firing patterns, the regularity of network is maximized by an optimal intensity of external noise, indicating the occurrence of coherence resonance. Moreover, the firing pattern of inhibitory neuron indeed has a significant influence on coherence resonance, but the efficacy is determined by network property. In the network with strong coupling strength but weak inhibition, bursting neurons largely increase the amplitude of resonance, while they can decrease the noise intensity that induced coherence resonance within the neural system of strong inhibition. Different temporal windows of inhibition induced by different inhibitory neurons may account for the above observations. The network structure also plays a constructive role in the coherence resonance. There exists an optimal network topology to maximize the regularity of the neural systems.

  20. Observation and discrimination of the mode patterns in a micron-sized hollow optical fiber and its synthetic measurements: far-field micro-imaging technique

    NASA Astrophysics Data System (ADS)

    Yin, Jianping; Kim, Kihwan; Shim, Wooshik; Zhu, Yifu; Jhe, Wonho

    1998-08-01

    We report a far-field micro-imaging technique that is used for the observation and discrimination of the mode patterns in a micron-sized hollow optical fiber as well as for the synthetic measurement of the fiber. By using an M-20X microscope objective lens, we obtained images, magnified by a factor of about 460, from the mode patterns at an output end facet of the hollow fiber with relative measurement accuracy better than 3%. This method can be used for clear identification of the mode patterns in the hollow fiber and detailed study of the relationship between the excitation conditions and the excited modes in the hollow fiber. Moreover, it is useful for the measurement of the geometrical sizes of the hollow fiber end and for testing the coupling efficiencies of the core and cladding modes in their mixed mode pattern. In addition, this method can be also used in the generation of a dark hollow laser beam with 10-micrometers dark-spot size and the measurement of the focused- spot size of a Gaussian laser beam with about 1-micrometers diameter.

  1. USING MULTIPLE-VIEWPOINT OBSERVATIONS TO DETERMINE THE INTERACTION OF THREE CORONAL MASS EJECTIONS OBSERVED ON 2012 MARCH 5

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Colaninno, Robin C.; Vourlidas, Angelos, E-mail: robin.colaninno@nrl.navy.mil, E-mail: angelos.vourlidas@jhuapl.edu

    2015-12-10

    We examine the interaction of three coronal mass ejections (CMEs) that took place on 2012 March 5 at heights less than 20 R{sub ⊙} in the corona. We used a forward fitting model to reconstruct the three-dimensional trajectories and kinematics of the CMEs and determine their interaction in the observations from three viewpoints: Solar and Heliospheric Observatory (SOHO), STEREO-A, and STEREO-B. The first CME (CME-1), a slow-rising eruption near disk center, is already in progress at 02:45 UT when the second CME (CME-2) erupts from AR 11429 on the east limb. These two CMEs are present in the corona not interactingmore » when a third CME (CME-3) erupts from AR 11429 at 03:34 UT. CME-3 has a constant velocity of 1456[±31] km s{sup −1} and drives a shock that is observed as a halo from all viewpoints. We find that the shock driven by CME-3 passed through CME-1 with no observable change in the geometry, trajectory, or velocity of CME-1. However, the elevated temperatures detected in situ when CME-1 reached Earth indicate that the plasma inside CME-1 may have been heated by the passage of the shock. CME-2 is accelerated by CME-3 to more than twice its initial velocity and remains a separate structure ahead of the CME-3 front. CME-2 is deflected 24° northward by CME-3 for a total deflection of 40° from its source region. These results suggest that the collision of CME-2 and CME-3 is superelastic. This work demonstrates the capability and utility of fitting forward models to complex and interacting CMEs observed in the corona from multiple viewpoints.« less

  2. Spatial patterns of erosion in a bedrock gorge

    NASA Astrophysics Data System (ADS)

    Beer, Alexander. R.; Turowski, Jens M.; Kirchner, James W.

    2017-01-01

    Understanding the physical processes driving bedrock channel formation is essential for interpreting and predicting the evolution of mountain landscapes. Here we analyze bedrock erosion patterns measured at unprecedented spatial resolution (mm) over 2 years in a natural bedrock gorge. These spatial patterns show that local bedrock erosion rates depend on position in the channel cross section, height above the streambed, and orientation relative to the main streamflow and sediment path. These observations are consistent with the expected spatial distribution of impacting particles (the tools effect) and shielding by sediment on the bed (the cover effect). Vertical incision by bedrock abrasion averaged 1.5 mm/a, lateral abrasion averaged 0.4 mm/a, and downstream directed abrasion of flow obstacles averaged 2.6 mm/a. However, a single plucking event locally exceeded these rates by orders of magnitude (˜100 mm/a), and accounted for one third of the eroded volume in the studied gorge section over the 2 year study period. Hence, if plucking is spatially more frequent than we observed in this study period, it may contribute substantially to long-term erosion rates, even in the relatively massive bedrock at our study site. Our observations demonstrate the importance of bedrock channel morphology and the spatial distribution of moving and static sediment in determining local erosion rates.

  3. Application of the surface azimuthal electrical resistivity survey method to determine patterns of regional joint orientation in glacial tills

    USGS Publications Warehouse

    Carlson, D.

    2010-01-01

    Joints within unconsolidated material such as glacial till can be primary avenues for the flow of electrical charge, water, and contaminants. To facilitate the siting and design of remediation programs, a need exists to map anisotropic distribution of such pathways within glacial tills by determining the azimuth of the dominant joint set. The azimuthal survey method uses standard resistivity equipment with a Wenner array rotated about a fixed center point at selected degree intervals that yields an apparent resistivity ellipse. From this ellipse, joint set orientation can be determined. Azimuthal surveys were conducted at 21 sites in a 500-km2 (193 mi2) area around Milwaukee, Wisconsin, and more specifically, at sites having more than 30 m (98 ft) of glacial till (to minimize the influence of underlying bedrock joints). The 26 azimuthal surveys revealed a systematic pattern to the trend of the dominant joint set within the tills, which is approximately parallel to ice flow direction during till deposition. The average orientation of the joint set parallel with the ice flow direction is N77??E and N37??E for the Oak Creek and Ozaukee tills, respectively. The mean difference between average direct observation of joint set orientations and average azimuthal resistivity results is 8??, which is one fifth of the difference of ice flow direction between the Ozaukee and Oak Creek tills. The results of this study suggest that the surface azimuthal electrical resistivity survey method used for local in situ studies can be a useful noninvasive method for delineating joint sets within shallow geologic material for regional studies. Copyright ?? 2010 The American Association of Petroleum Geologists/Division of Environmental Geosciences. All rights reserved.

  4. [Preliminary report concerning the histologica patterns of an anthracotic pneumoconiosis observed in the area of Londrina, Brasil (author's transl)].

    PubMed

    Coelho, R

    1975-01-01

    The A. presents a preliminary report concerning on the histologic patterns of an anthracotic pneumoconiosis found in necropsies of the "Hospital Universitário da Universidade de Londrina", Paraná, Brazil, and in some cases from the Legal Institute of the same town. The lesions, on its histologic pattern are comparable to those observed in the lung of coal and iron mines workers as described in the consulted literature. The cases studied (plantations workers and dwellers at rural and suburban areas) are proceeding from an essencially agricultural region, without detectable polluition by industry or others known factors. This agricultural zone presents some geophysic peculiarities and dust from the errosive soil, is a constant factor in the local athmosphere. The soil is so called "Terra Roxa" (red soil) and in its physicochemical composition there is a great amount of iron oxides, silica (silt, agril laceous material), aluminium, manganese, organic compounds. In this preliminary report the A. suggests further research for a better knowledge of the composition of the respirable air and if dust exposures are or not responsible for the lung lesions.

  5. Seasonal circulation patterns of the Yellow and East China Seas derived from satellite-tracked drifter trajectories and hydrographic observations

    NASA Astrophysics Data System (ADS)

    Lie, Heung-Jae; Cho, Cheol-Ho

    2016-08-01

    We investigated seasonal circulation patterns of the Yellow and East China Seas (YECS), by reviewing previous works on the circulation and its dominant currents, and taking into account newly-compiled trajectories of satellite-tracked drifters collected between the 1980s and 2000s. The circulation patterns suggested before the 1990s can be categorized into two groups, depending on the identified origin of the Tsushima Warm Current in the Korea-Tsushima Straits: (i) branching from the Kuroshio southwest of Kyushu, or (ii) northeastward continuation of the Taiwan Strait throughflow. The branching of the Kuroshio southwest of Kyushu and northeast of Taiwan was clearly evidenced by current measurements and concurrent hydrographic surveys. However, there is still no clear evidence for the northeastward pathway of Taiwan Strait throughflow across the mid-shelf area of the East China Sea. Target-oriented surveys in the 1990s and 2000s employing advanced instruments, such as drifter tracking and acoustic Doppler current profiler measurements, now provide decisive proof of the clockwise rounding of the Cheju Warm Current around Jeju-do throughout the year, of the northeastward extension of Changjiang discharge in summer, and of the presence of the Yellow Sea Warm Current only in winter. Thus, both coastal currents in shallow water and secondary branch currents of the Kuroshio (such as the Yellow Sea Warm Current) are found to significantly change from winter to summer. To better present the basic pattern of YECS circulation and its seasonality, we have constructed seasonal circulations patterns, based on review results, on the newly-compiled drifter trajectories, and on hydrographic observations. Further investigations should be carried out in future, with support of comprehensive current measurements on shelf areas and through elaborate numerical modeling.

  6. Observational changes to the natural flow regime in Lee Creek in relation to altered precipitation patterns and its implication for fishes

    USGS Publications Warehouse

    Gatlin, Michael R.; Long, James M.; Turton, Donald J.

    2015-01-01

    The natural flow regime is important for structuring streams and their resident ichthyofauna and alterations to this regime can have cascading consequences. We sought to determine if changes in hydrology could be attributed to changes in precipitation in a minimally altered watershed (Lee Creek). The stream flow regime was analyzed using Indicators of Hydrologic Alteration (IHA) software, and data from a nearby climate station were used to summarize concurrent precipitation patterns. We discovered that Lee Creek hydrology had become flashier (i.e., increased frequency of extreme events of shorter duration) since 1992 coincident with changes in precipitation patterns. Specifically, our results show fewer but more intense rain events within the Lee Creek watershed. Our research provides evidence that climate-induced changes to the natural flow regime are currently underway and additional research on its effects on the fish community is warranted.

  7. Modifying patterns of movement in people with low back pain -does it help? A systematic review.

    PubMed

    Laird, Robert A; Kent, Peter; Keating, Jennifer L

    2012-09-07

    Physiotherapy for people with low back pain frequently includes assessment and modification of lumbo-pelvic movement. Interventions commonly aim to restore normal movement and thereby reduce pain and improve activity limitation. The objective of this systematic review was to investigate: (i) the effect of movement-based interventions on movement patterns (muscle activation, lumbo-pelvic kinematics or postural patterns) of people with low back pain (LBP), and (ii) the relationship between changes in movement patterns and subsequent changes in pain and activity limitation. MEDLINE, Cochrane Central, EMBASE, AMI, CINAHL, Scopus, AMED, ISI Web of Science were searched from inception until January 2012. Randomised controlled trials or controlled clinical trials of people with LBP were eligible for inclusion. The intervention must have been designed to influence (i) muscle activity patterns, (ii) lumbo-pelvic kinematic patterns or (iii) postural patterns, and included measurement of such deficits before and after treatment, to allow determination of the success of the intervention on the lumbo-pelvic movement. Twelve trials (25% of retrieved studies) met the inclusion criteria. Two reviewers independently identified, assessed and extracted data. The PEDro scale was used to assess method quality. Intervention effects were described using standardised differences between group means and 95% confidence intervals. The included trials showed inconsistent, mostly small to moderate intervention effects on targeted movement patterns. There was considerable heterogeneity in trial design, intervention type and outcome measures. A relationship between changes to movement patterns and improvements in pain or activity limitation was observed in one of six studies on muscle activation patterns, one of four studies that examined the flexion relaxation response pattern and in two of three studies that assessed lumbo-pelvic kinematics or postural characteristics. Movement

  8. Quantitative assessment of groundwater quality using a biological indicator: some preliminary observations.

    PubMed

    Pfeil, R M; Venkat, J A; Plimmer, J R; Sham, S; Davis, K; Nair, P P

    1994-02-01

    The genotoxicity of groundwater was evaluated, using a novel application of the SOS microplate assay (SOSMA). Organic residues were extracted from groundwater samples from Maryland, Pennsylvania, and Delaware by using C-18 bonded silica solid phase extraction tubes. Total organic carbon content (TOC) of water samples was also determined. The genotoxicity of the extracts was determined by the SOSMA. Relative activity (RA) as determined by the SOSMA is a quantitative measure of genotoxicity based on a comparison to the activity of the mutagen, 4-nitroquinoline oxide. Low levels of RA (about 2x background) were detected in waters from sites within these states. There was considerable temporal and spatial variation in the observed RA, but no definite patterns were observed in the variation. Between sampling sites there was a positive correlation between RA and TOC; however, this relationship appeared to be reversed occasionally within a sampling site. The extraction and bioassay methods provide an easy and relatively inexpensive means of determining water quality.

  9. Oral cancer radiotherapy affects enamel microhardness and associated indentation pattern morphology

    PubMed Central

    Seyedmahmoud, R.; Thiagarajan, G.; Gorski, J. P.; Reed Edwards, R.; McGuire, J. D.

    2017-01-01

    Objectives The aim of this study is to determine the effects of in vitro and in vivo high-dose radiotherapy on microhardness and associated indentation pattern morphology of enamel. Materials and methods The inner, middle, and outer microhardness of enamel was evaluated using three experimental groups: control (non-radiated); in vitro irradiated; in vivo irradiated. In vitro specimens were exposed to simulated radiotherapy, and in vivo specimens were extracted teeth from oral cancer patients previously treated with radiotherapy. Indentations were measured via SEM images to calculate microhardness values and to assess the mechanomorphological properties of enamel before and after radiotherapy. Results Middle and outer regions of enamel demonstrated a significant decrease in microhardness after in vitro and in vivo irradiation compared to the control group (p < 0.05). Two indentation patterns were observed: pattern A—presence of microcracks around indent periphery, which represents local dissipation of deformation energy; pattern B—clean, sharp indents. The percentage of clean microindentation patterns, compared to controls, was significantly higher following in vitro and in vivo irradiation in all enamel regions. The highest percentage of clean microindentations (65%) was observed in the in vivo irradiated group in the inner region of enamel near the dentin-enamel junction. Conclusions For the first time, this study shows that in vitro and in vivo irradiation alters enamel microhardness. Likewise, the indentation pattern differences suggest that enamel may become more brittle following in vitro and in vivo irradiation. Clinical relevance The mechanomorphological property changes of enamel following radiation may be a contributory component of pathologic enamel delamination following oral cancer radiotherapy. PMID:29151196

  10. Correlated tuning of the speckle pattern in an interferometer based on a multimode fiber-optic waveguide

    NASA Astrophysics Data System (ADS)

    Bykovskii, Iu. A.; Kul'Chin, Iu. N.; Obukh, V. F.; Smirnov, V. L.

    1990-08-01

    The correlated tuning of the speckle pattern in the radiation field of a single-fiber multimode interferometer is investigated experimentally and analytically in the presence of external action. It is found that correlated changes in the speckle pattern are observed in both the near and the far emission fields of the waveguide. An expression is obtained which provides a way to determine the maximum size of the speckle correlation region. The use of spatial filtering for isolating the effect of correlated speckle pattern tuning is suggested. It is shown that the use of a spatial filter makes it possible to increase the efficiency of fiber-optic transducers.

  11. Urogenital Chlamydia trachomatis infections among ethnic groups in Paramaribo, Suriname; determinants and ethnic sexual mixing patterns.

    PubMed

    van der Helm, Jannie J; Bom, Reinier J M; Grünberg, Antoon W; Bruisten, Sylvia M; Schim van der Loeff, Maarten F; Sabajo, Leslie O A; de Vries, Henry J C

    2013-01-01

    Little is known about the epidemiology of urogenital Chlamydia trachomatis infection (chlamydia) in Suriname. Suriname is a society composed of many ethnic groups, such as Creoles, Maroons, Hindustani, Javanese, Chinese, Caucasians, and indigenous Amerindians. We estimated determinants for chlamydia, including the role of ethnicity, and identified transmission patterns and ethnic sexual networks among clients of two clinics in Paramaribo, Suriname. Participants were recruited at two sites a sexually transmitted infections (STI) clinic and a family planning (FP) clinic in Paramaribo. Urine samples from men and nurse-collected vaginal swabs were obtained for nucleic acid amplification testing. Logistic regression analysis was used to identify determinants of chlamydia. Multilocus sequence typing (MLST) was performed to genotype C. trachomatis. To identify transmission patterns and sexual networks, a minimum spanning tree was created, using full MLST profiles. Clusters in the minimum spanning tree were compared for ethnic composition. Between March 2008 and July 2010, 415 men and 274 women were included at the STI clinic and 819 women at the FP clinic. Overall chlamydia prevalence was 15% (224/1508). Age, ethnicity, and recruitment site were significantly associated with chlamydia in multivariable analysis. Participants of Creole and Javanese ethnicity were more frequently infected with urogenital chlamydia. Although sexual mixing with other ethnic groups did differ significantly per ethnicity, this mixing was not independently significantly associated with chlamydia. We typed 170 C. trachomatis-positive samples (76%) and identified three large C. trachomatis clusters. Although the proportion from various ethnic groups differed significantly between the clusters (P = 0.003), all five major ethnic groups were represented in all three clusters. Chlamydia prevalence in Suriname is high and targeted prevention measures are required. Although ethnic sexual mixing

  12. Urogenital Chlamydia trachomatis Infections among Ethnic Groups in Paramaribo, Suriname; Determinants and Ethnic Sexual Mixing Patterns

    PubMed Central

    van der Helm, Jannie J.; Bom, Reinier J. M.; Grünberg, Antoon W.; Bruisten, Sylvia M.; Schim van der Loeff, Maarten F.; Sabajo, Leslie O. A.; de Vries, Henry J. C.

    2013-01-01

    Background Little is known about the epidemiology of urogenital Chlamydia trachomatis infection (chlamydia) in Suriname. Suriname is a society composed of many ethnic groups, such as Creoles, Maroons, Hindustani, Javanese, Chinese, Caucasians, and indigenous Amerindians. We estimated determinants for chlamydia, including the role of ethnicity, and identified transmission patterns and ethnic sexual networks among clients of two clinics in Paramaribo, Suriname. Methods Participants were recruited at two sites a sexually transmitted infections (STI) clinic and a family planning (FP) clinic in Paramaribo. Urine samples from men and nurse-collected vaginal swabs were obtained for nucleic acid amplification testing. Logistic regression analysis was used to identify determinants of chlamydia. Multilocus sequence typing (MLST) was performed to genotype C. trachomatis. To identify transmission patterns and sexual networks, a minimum spanning tree was created, using full MLST profiles. Clusters in the minimum spanning tree were compared for ethnic composition. Results Between March 2008 and July 2010, 415 men and 274 women were included at the STI clinic and 819 women at the FP clinic. Overall chlamydia prevalence was 15% (224/1508). Age, ethnicity, and recruitment site were significantly associated with chlamydia in multivariable analysis. Participants of Creole and Javanese ethnicity were more frequently infected with urogenital chlamydia. Although sexual mixing with other ethnic groups did differ significantly per ethnicity, this mixing was not independently significantly associated with chlamydia. We typed 170 C. trachomatis-positive samples (76%) and identified three large C. trachomatis clusters. Although the proportion from various ethnic groups differed significantly between the clusters (P = 0.003), all five major ethnic groups were represented in all three clusters. Conclusion Chlamydia prevalence in Suriname is high and targeted prevention measures are

  13. Dynamic Pattern Formation for Wings of Pterygota in an Eclosion ---Pattern Analysis for Wings with the Imago---

    NASA Astrophysics Data System (ADS)

    Seino, M.; Kakazu, Y.

    The vein and cell patterns for the fore and hind wing of Lepidoptera, Hemiptera, Orthoptera and Odonata are analyzed and discussed. For vein patterns of them, the fractal properties are shown and the inequality between four orders is obtained. The nature of wings observed by mass distributions for fractal dimensions of the vein pattern is presented.

  14. Determination of the anaerobic threshold in the pre-operative assessment clinic: inter-observer measurement error.

    PubMed

    Sinclair, R C F; Danjoux, G R; Goodridge, V; Batterham, A M

    2009-11-01

    The variability between observers in the interpretation of cardiopulmonary exercise tests may impact upon clinical decision making and affect the risk stratification and peri-operative management of a patient. The purpose of this study was to quantify the inter-reader variability in the determination of the anaerobic threshold (V-slope method). A series of 21 cardiopulmonary exercise tests from patients attending a surgical pre-operative assessment clinic were read independently by nine experienced clinicians regularly involved in clinical decision making. The grand mean for the anaerobic threshold was 10.5 ml O(2).kg body mass(-1).min(-1). The technical error of measurement was 8.1% (circa 0.9 ml.kg(-1).min(-1); 90% confidence interval, 7.4-8.9%). The mean absolute difference between readers was 4.5% with a typical random error of 6.5% (6.0-7.2%). We conclude that the inter-observer variability for experienced clinicians determining the anaerobic threshold from cardiopulmonary exercise tests is acceptable.

  15. An eye tracking study of bloodstain pattern analysts during pattern classification.

    PubMed

    Arthur, R M; Hoogenboom, J; Green, R D; Taylor, M C; de Bruin, K G

    2018-05-01

    Bloodstain pattern analysis (BPA) is the forensic discipline concerned with the classification and interpretation of bloodstains and bloodstain patterns at the crime scene. At present, it is unclear exactly which stain or pattern properties and their associated values are most relevant to analysts when classifying a bloodstain pattern. Eye tracking technology has been widely used to investigate human perception and cognition. Its application to forensics, however, is limited. This is the first study to use eye tracking as a tool for gaining access to the mindset of the bloodstain pattern expert. An eye tracking method was used to follow the gaze of 24 bloodstain pattern analysts during an assigned task of classifying a laboratory-generated test bloodstain pattern. With the aid of an automated image-processing methodology, the properties of selected features of the pattern were quantified leading to the delineation of areas of interest (AOIs). Eye tracking data were collected for each AOI and combined with verbal statements made by analysts after the classification task to determine the critical range of values for relevant diagnostic features. Eye-tracking data indicated that there were four main regions of the pattern that analysts were most interested in. Within each region, individual elements or groups of elements that exhibited features associated with directionality, size, colour and shape appeared to capture the most interest of analysts during the classification task. The study showed that the eye movements of trained bloodstain pattern experts and their verbal descriptions of a pattern were well correlated.

  16. Determination of projection effects of CMEs using quadrature observations with the two STEREO spacecraft

    NASA Astrophysics Data System (ADS)

    Bronarska, K.; Michalek, G.

    2018-07-01

    Since 1995 coronal mass ejections (CMEs) have been routinely observed thanks to the sensitive Large Angle and Spectrometric Coronagraphs (LASCO) on board the Solar and Heliospheric Observatory (SOHO) mission. Their observed characteristics are stored, among other, in the SOHO/LASCO catalog. These parameters are commonly used in scientific studies. Unfortunately, coronagraphic observations of CMEs are subject to projection effects. This makes it practically impossible to determine the true properties of CMEs and therefore makes it more difficult to forecast their geoeffectiveness. In this study, using quadrature observations with the two Solar Terrestrial Relations Observatory (STEREO) spacecrafts, we estimate the projection effect affecting velocity of CMEs included in the SOHO/LASCO catalog. It was demonstrated that this effect depends significantly on width and source location of CMEs. It can be very significant for narrow events and originating from the disk center. The effect diminishes with increasing width and absolute longitude of source location of CMEs. For very wide (width ⩾ 250°) or limb events (| longitude ⩾ 70°) projection effects completely disappears.

  17. Pattern formation in superdiffusion Oregonator model

    NASA Astrophysics Data System (ADS)

    Feng, Fan; Yan, Jia; Liu, Fu-Cheng; He, Ya-Feng

    2016-10-01

    Pattern formations in an Oregonator model with superdiffusion are studied in two-dimensional (2D) numerical simulations. Stability analyses are performed by applying Fourier and Laplace transforms to the space fractional reaction-diffusion systems. Antispiral, stable turing patterns, and travelling patterns are observed by changing the diffusion index of the activator. Analyses of Floquet multipliers show that the limit cycle solution loses stability at the wave number of the primitive vector of the travelling hexagonal pattern. We also observed a transition between antispiral and spiral by changing the diffusion index of the inhibitor. Project supported by the National Natural Science Foundation of China (Grant Nos. 11205044 and 11405042), the Research Foundation of Education Bureau of Hebei Province, China (Grant Nos. Y2012009 and ZD2015025), the Program for Young Principal Investigators of Hebei Province, China, and the Midwest Universities Comprehensive Strength Promotion Project.

  18. Impact of Multi-GNSS Observations on Precise Orbit Determination and Precise Point Positioning Solutions

    NASA Astrophysics Data System (ADS)

    Amiri, N.; Bertiger, W. I.; Lu, W.; Miller, M. A.; David, M. W.; Ries, P.; Romans, L.; Sibois, A. E.; Sibthorpe, A.; Sakumura, C.

    2017-12-01

    Impact of Multi-GNSS Observations on Precise Orbit Determination and Precise Point Positioning Solutions Authors: Nikta Amiri, Willy Bertiger, Wenwen Lu, Mark Miller, David Murphy, Paul Ries, Larry Romans, Carly Sakumura, Aurore Sibois, Anthony Sibthorpe All at the Jet Propulsion Laboratory, California Institute of Technology Multiple Global Navigation Satellite Systems (GNSS) are now in various stages of completion. The four current constellations (GPS, GLONASS, BeiDou, Galileo) comprise more than 80 satellites as of July 2017, with 120 satellites expected to be available when all four constellations become fully operational. We investigate the impact of simultaneous observations to these four constellations on global network precise orbit determination (POD) solutions, and compare them to available sets of orbit and clock products submitted to the Multi-GNSS Experiment (MGEX). Using JPL's GipsyX software, we generate orbit and clock products for the four constellations. The resulting solutions are evaluated based on a number of metrics including day-to-day internal and external orbit and/or clock overlaps and estimated constellation biases. Additionally, we examine estimated station positions obtained from precise point positioning (PPP) solutions by comparing results generated from multi-GNSS and GPS-only orbit and clock products.

  19. The use of stereoscopic satellite observation in the determination of the emissivity of cirrus

    NASA Astrophysics Data System (ADS)

    Szejwach, G.; Sletten, T. N.; Hasler, A. F.

    The feasibility of determining cirrus ``emissivity'' from combined stereoscopic and infrared satellite observations in conjunction with radiosounding data is investigated for a particular case study. Simultaneous visible images obtained during SESAME-1979 from two geosynchronous GOES meteorological satellites were processed on the NASA/Goddard interactive system (AOIPS) and were used to determine the stereo cloud top height ZC as described by Hasler [1]. Iso-contours of radiances were outlined on the corresponding infrared image. Total brightness temperature TB and ground surface brightness temperature TS were inferred from the radiances. The special SESAME network of radiosoundings was used to determine the cloud top temperature TCLD at the level defined by ZC. The ``effective cirrus emissivity'' NE where N is the fractional cirrus cloudiness and E is the emissivity in a GOES infrared picture element of about 10 km × 10 km is then computed from TB, TS and TCLD.

  20. Species-area relationships in coral communities: evaluating mechanisms for a commonly observed pattern

    NASA Astrophysics Data System (ADS)

    Huntington, B. E.; Lirman, D.

    2012-12-01

    Landscape-scale attributes of patch size, spatial isolation, and topographic complexity are known to influence diversity and abundance in terrestrial and marine systems, but remain collectively untested for reef-building corals. To investigate the relationship between the coral assemblage and seascape variation in reef habitats, we took advantage of the distinct boundaries, spatial configurations, and topographic complexities among artificial reef patches to overcome the difficulties of manipulating natural reefs. Reef size (m2) was found to be the foremost predictor of coral richness in accordance with species-area relationship predictions. Larger reefs were also found to support significantly higher colony densities, enabling us to reject the null hypothesis of random placement (a sampling artifact) in favor of target area predictions that suggest greater rates of immigration on larger reefs. Unlike the pattern previously documented for reef fishes, topographic complexity was not a significant predictor of any coral assemblage response variable, despite the range of complexity values sampled. Lastly, coral colony density was best explained by both increasing reef size and decreasing reef spatial isolation, a pattern found exclusively among brooding species with shorter larval dispersal distances. We conclude that seascape attributes of reef size and spatial configuration within the seascape can influence the species richness and abundance of the coral community at relatively small spatial scales (<1 km). Specifically, we demonstrate how patterns in the coral communities that have naturally established on these manipulated reefs agree with the target area and island biogeography mechanisms to drive species-area relationships in reef-building corals. Based on the patterns documented in artificial reefs, habitat degradation that results in smaller, more isolated natural reefs may compromise coral diversity.

  1. Observed patterns of misuse of child safety seats

    DOT National Transportation Integrated Search

    1996-09-01

    The National Highway Traffic Safety Administration : (NHTSA) sponsored a study to observe more than 5,900 : children in safety seats or wearing safety belts in : suburban shopping centers in the spring and summer of : 1995. The Ketron Division of the...

  2. Soil moisture variation patterns observed in Hand County, South Dakota

    NASA Technical Reports Server (NTRS)

    Jones, E. B.; Owe, M.; Schmugge, T. J. (Principal Investigator)

    1981-01-01

    Soil moisture data were taken during 1976 (April, June, October), 1977 (April, May, June), and 1978 (May, June, July) Hand County, South Dakota as part of the ground truth used in NASA's aircraft experiments to study the use of microwave radiometers for the remote sensing of soil moisture. The spatial variability observed on the ground during each of the sampling events was studied. The data reported are the mean gravimetric soil moisture contained in three surface horizon depths: 0 to 2.5, 0 to 5 and 0 to 10 cm. The overall moisture levels ranged from extremely dry conditions in June 1976 to very wet in May 1978, with a relatively even distribution of values within that range. It is indicated that well drained sites have to be partitioned from imperfectly drained areas when attempting to characterize the general moisture profile throughout an area of varying soil and cover type conditions. It is also found that the variability in moisture content is greatest in the 0 to 2.5 cm measurements and decreases as the measurements are integrated over a greater depth. It is also determined that the sampling intensity of 10 measurements per km is adequate to estimate the mean moisture with an uncertainty of + or - 3 percent under average moisture conditions in areas of moderate to good drainage.

  3. A unique stylopod patterning mechanism by Shox2-controlled osteogenesis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ye, Wenduo; Song, Yingnan; Huang, Zhen

    Here, vertebrate appendage patterning is programmed by Hox-TALE factorbound regulatory elements. However, it remains unclear which cell lineages are commissioned by Hox-TALE factors to generate regional specific patterns and whether other Hox-TALE co-factors exist. In this study, we investigated the transcriptional mechanisms controlled by the Shox2 transcriptional regulator in limb patterning. Harnessing an osteogenic lineage-specific Shox2 inactivation approach we show that despite widespread Shox2 expression in multiple cell lineages, lack of the stylopod observed upon Shox2 deficiency is a specific result of Shox2 loss of function in the osteogenic lineage. ChIP-Seq revealed robust interaction of Shox2 with cis-regulatory enhancers clusteringmore » around skeletogenic genes that are also bound by Hox-TALE factors, supporting a lineage autonomous function of Shox2 in osteogenic lineage fate determination and skeleton patterning. Pbx ChIP-Seq further allowed the genome-wide identification of cis-regulatory modules exhibiting co-occupancy of Pbx, Meis and Shox2 transcriptional regulators. Integrative analysis of ChIP-Seq and RNA-Seq data and transgenic enhancer assays indicate that Shox2 patterns the stylopod as a repressor via interaction with enhancers active in the proximal limb mesenchyme and antagonizes the repressive function of TALE factors in osteogenesis.« less

  4. A unique stylopod patterning mechanism by Shox2-controlled osteogenesis

    DOE PAGES

    Ye, Wenduo; Song, Yingnan; Huang, Zhen; ...

    2016-06-10

    Here, vertebrate appendage patterning is programmed by Hox-TALE factorbound regulatory elements. However, it remains unclear which cell lineages are commissioned by Hox-TALE factors to generate regional specific patterns and whether other Hox-TALE co-factors exist. In this study, we investigated the transcriptional mechanisms controlled by the Shox2 transcriptional regulator in limb patterning. Harnessing an osteogenic lineage-specific Shox2 inactivation approach we show that despite widespread Shox2 expression in multiple cell lineages, lack of the stylopod observed upon Shox2 deficiency is a specific result of Shox2 loss of function in the osteogenic lineage. ChIP-Seq revealed robust interaction of Shox2 with cis-regulatory enhancers clusteringmore » around skeletogenic genes that are also bound by Hox-TALE factors, supporting a lineage autonomous function of Shox2 in osteogenic lineage fate determination and skeleton patterning. Pbx ChIP-Seq further allowed the genome-wide identification of cis-regulatory modules exhibiting co-occupancy of Pbx, Meis and Shox2 transcriptional regulators. Integrative analysis of ChIP-Seq and RNA-Seq data and transgenic enhancer assays indicate that Shox2 patterns the stylopod as a repressor via interaction with enhancers active in the proximal limb mesenchyme and antagonizes the repressive function of TALE factors in osteogenesis.« less

  5. Breakthrough in orbit determination of a binary. - In expectation of astrometric observations with high precision such as VERA and JASMINE -

    NASA Astrophysics Data System (ADS)

    Asada, Hideki

    2006-11-01

    There exists a very classical inverse problem regarding orbit determination of a binary system: "when an orbital plane of two bodies is inclined with respect to the line of sight, observables are their positions projected onto a celestial sphere. How do we determine the orbital elements from observations?" A "complete exact solution" has been found. It is reviewed with some related topics.

  6. Regulatory observations in bioanalytical determinations.

    PubMed

    Viswanathan, C T

    2010-07-01

    The concept of measuring analytes in biological media is a long-established area of the quantitative sciences that is employed in many sectors. While academic research and R&D units of private firms have been in the forefront of developing complex methodologies, it is the regulatory environment that has brought the focus and rigor to the quality control of the quantitative determination of drug concentration in biological samples. In this article, the author examines the regulatory findings discovered during the course of several years of auditing bioanalytical work. The outcomes of these findings underscore the importance of quality method validation to ensure the reliability of the data generated. The failure to ensure the reliability of these data can lead to potential risks in the health management of millions of people in the USA.

  7. Egg Speckling Patterns Do Not Advertise Offspring Quality or Influence Male Provisioning in Great Tits

    PubMed Central

    Stoddard, Mary Caswell; Fayet, Annette L.; Kilner, Rebecca M.; Hinde, Camilla A.

    2012-01-01

    Many passerine birds lay white eggs with reddish brown speckles produced by protoporphyrin pigment. However, the function of these spots is contested. Recently, the sexually selected eggshell coloration (SSEC) hypothesis proposed that eggshell color is a sexually selected signal through which a female advertises her quality (and hence the potential quality of her future young) to her male partner, thereby encouraging him to contribute more to breeding attempts. We performed a test of the SSEC hypothesis in a common passerine, the great tit Parus major. We used a double cross-fostering design to determine whether males change their provisioning behavior based on eggshell patterns they observe at the nest. We also tested the assumption that egg patterning reflects female and/or offspring quality. Because birds differ from humans in their color and pattern perception, we used digital photography and models of bird vision to quantify egg patterns objectively. Neither male provisioning nor chick growth was related to the pattern of eggs males observed during incubation. Although heavy females laid paler, less speckled eggs, these eggs did not produce chicks that grew faster. Therefore, we conclude that the SSEC hypothesis is an unlikely explanation for the evolution of egg speckling in great tits. PMID:22815730

  8. Estimating the Proportion of True Null Hypotheses Using the Pattern of Observed p-values

    PubMed Central

    Tong, Tiejun; Feng, Zeny; Hilton, Julia S.; Zhao, Hongyu

    2013-01-01

    Estimating the proportion of true null hypotheses, π0, has attracted much attention in the recent statistical literature. Besides its apparent relevance for a set of specific scientific hypotheses, an accurate estimate of this parameter is key for many multiple testing procedures. Most existing methods for estimating π0 in the literature are motivated from the independence assumption of test statistics, which is often not true in reality. Simulations indicate that most existing estimators in the presence of the dependence among test statistics can be poor, mainly due to the increase of variation in these estimators. In this paper, we propose several data-driven methods for estimating π0 by incorporating the distribution pattern of the observed p-values as a practical approach to address potential dependence among test statistics. Specifically, we use a linear fit to give a data-driven estimate for the proportion of true-null p-values in (λ, 1] over the whole range [0, 1] instead of using the expected proportion at 1 − λ. We find that the proposed estimators may substantially decrease the variance of the estimated true null proportion and thus improve the overall performance. PMID:24078762

  9. Estimating the Proportion of True Null Hypotheses Using the Pattern of Observed p-values.

    PubMed

    Tong, Tiejun; Feng, Zeny; Hilton, Julia S; Zhao, Hongyu

    2013-01-01

    Estimating the proportion of true null hypotheses, π 0 , has attracted much attention in the recent statistical literature. Besides its apparent relevance for a set of specific scientific hypotheses, an accurate estimate of this parameter is key for many multiple testing procedures. Most existing methods for estimating π 0 in the literature are motivated from the independence assumption of test statistics, which is often not true in reality. Simulations indicate that most existing estimators in the presence of the dependence among test statistics can be poor, mainly due to the increase of variation in these estimators. In this paper, we propose several data-driven methods for estimating π 0 by incorporating the distribution pattern of the observed p -values as a practical approach to address potential dependence among test statistics. Specifically, we use a linear fit to give a data-driven estimate for the proportion of true-null p -values in (λ, 1] over the whole range [0, 1] instead of using the expected proportion at 1 - λ. We find that the proposed estimators may substantially decrease the variance of the estimated true null proportion and thus improve the overall performance.

  10. Patterns of fire activity over Indonesia and Malaysia from polar and geostationary satellite observations

    NASA Astrophysics Data System (ADS)

    Hyer, Edward J.; Reid, Jeffrey S.; Prins, Elaine M.; Hoffman, Jay P.; Schmidt, Christopher C.; Miettinen, Jukka I.; Giglio, Louis

    2013-03-01

    Biomass burning patterns over the Maritime Continent of Southeast Asia are examined using a new active fire detection product based on application of the Wildfire Automated Biomass Burning Algorithm (WF_ABBA) to data from the imagers on the MTSAT geostationary satellites operated by the Japanese space agency JAXA. Data from MTSAT-1R and MTSAT-2 covering 34 months from September 2008 to July 2011 are examined for a study region consisting of Indonesia, Malaysia, and nearby environs. The spatial and temporal distributions of fires detected in the MTSAT WF_ABBA product are described and compared with active fire observations from MODIS MOD14 data. Land cover distributions for the two instruments are examined using a new 250 m land cover product from the National University of Singapore. The two products show broadly similar patterns of fire activity, land cover distribution of fires, and pixel fire radiative power (FRP). However, the MTSAT WF_ABBA data differ from MOD14 in important ways. Relative to MODIS, the MTSAT WF_ABBA product has lower overall detection efficiency, but more fires detected due to more frequent looks, a greater relative fraction of fires in forest and a lower relative fraction of fires in open areas, and significantly higher single-pixel retrieved FRP. The differences in land cover distribution and FRP between the MTSAT and MODIS products are shown to be qualitatively consistent with expectations based on pixel size and diurnal sampling. The MTSAT WF_ABBA data are used to calculate coverage-corrected diurnal cycles of fire for different regions within the study area. These diurnal cycles are preliminary but demonstrate that the fraction of diurnal fire activity sampled by the two MODIS sensors varies significantly by region and vegetation type. Based on the results from comparison of the two fire products, a series of steps is outlined to account for some of the systematic biases in each of these satellite products in order to produce a

  11. Movement Processes as Observable Behavior.

    ERIC Educational Resources Information Center

    Harrington, Wilma M.

    The operations for achieving skill in motor performance are perceiving, patterning, adapting, refining, varying, improvising, and composing. These operations are readily observable in physical education classes. An observation record containing the seven catagories was used to classify teacher feedback to students. The teachers observed were…

  12. Determination of the observation conditions of celestial bodies with the aid of the DISPO system

    NASA Technical Reports Server (NTRS)

    Kazakov, R. K.; Krivov, A. V.

    1984-01-01

    The interactive system for determining the observation conditions of celestial bodies is described. A system of programs was created containing a part of the DISPO Display Interative System of Orbit Planning. The system was used for calculating the observatiion characteristics of Halley's comet during its approach to Earth in 1985-86.

  13. Patterns produced when soil is transferred to bras by placing and dragging actions: The application of digital photography and image processing to support visible observations.

    PubMed

    Murray, Kathleen R; Fitzpatrick, Robert W; Bottrill, Ralph; Kobus, Hilton

    2017-07-01

    A series of soil transference experiments (STEs) were undertaken to determine whether patterns identified in laboratory experiments could also be recognised at a simulated crime scene in the field. A clothed 55kg human rescue dummy dressed in a padded bra was either dragged or merely placed on a soil surface at sites with natural and anthropogenic soil types under both wet and dry soil conditions. Transfer patterns produced by dragging compared favourably with those of laboratory experiments. Twelve patterns were identified when a clothed human rescue dummy was dragged across the two soil types in the field. This expanded the original set of eight soil transfer patterns identified from dragging weighted fabric across soil samples in the laboratory. Soil transferred by placing the human rescue dummy resulted in a set of six transfer patterns that were different to those produced by dragging. By comparing trace soil patterns transferred to bras using each transfer method, it was revealed that certain transfer patterns on bras could indicate how the fabric had made contact with a soil surface. A photographic method was developed for crime scene examiners to capture this often subtle soil evidence before a body is transported or the clothing removed. This improved understanding of the dynamics of soil transference to bras and related clothing fabric may assist forensic investigators reconstruct the circumstances of a variety of forensic events. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Variant Alleles, Triallelic Patterns, and Point Mutations Observed in Nuclear Short Tandem Repeat Typing of Populations in Bosnia and Serbia

    PubMed Central

    Huel, René L. M.; Bašić, Lara; Madacki-Todorović, Kamelija; Smajlović, Lejla; Eminović, Izet; Berbić, Irfan; Miloš, Ana; Parsons, Thomas J.

    2007-01-01

    Aim To present a compendium of off-ladder alleles and other genotyping irregularities relating to rare/unexpected population genetic variation, observed in a large short tandem repeat (STR) database from Bosnia and Serbia. Methods DNA was extracted from blood stain cards relating to reference samples from a population of 32 800 individuals from Bosnia and Serbia, and typed using Promega’s PowerPlex®16 STR kit. Results There were 31 distinct off-ladder alleles were observed in 10 of the 15 STR loci amplified from the PowerPlex®16 STR kit. Of these 31 alleles, 3 have not been previously reported. Furthermore, 16 instances of triallelic patterns were observed in 9 of the 15 loci. Primer binding site mismatches that affected amplification were observed in two loci, D5S818 and D8S1179. Conclusion Instances of deviations from manufacturer’s allelic ladders should be expected and caution taken to properly designate the correct alleles in large DNA databases. Particular care should be taken in kinship matching or paternity cases as incorrect designation of any of these deviations from allelic ladders could lead to false exclusions. PMID:17696304

  15. Long-term patterns of chronic complaints of the arms, neck, and shoulders and their determinants--the Doetinchem Cohort Study.

    PubMed

    van Hulst, Rens; van Oostrom, Sandra H; Ostelo, Raymond W J G; Verschuren, W M Monique; Picavet, H Susan

    2016-05-01

    Complaints of the arms, neck, and shoulders (CANS) represent a major public health problem but the long-term course is largely unknown. Our objective was to explore the 15-year course of chronic CANS and its determinants in a population-based cohort. During 1993 to 2012, 3050 men and women aged 26 to 65 years at baseline were measured every 5 years, up to 4 times. Complaints of the arms, neck, and shoulders and sociodemographic, lifestyle, mental health, and physical load determinants were obtained by self-reported questionnaires and physical examinations. Information on chronic CANS was used to create patterns of the 15-year course: persistence, recovery, variable, no CANS, and the development of CANS. Only 47% were free of chronic CANS throughout the total 15-year period. The prevalence of other patterns was development (18.3%), persistence (8.5%), recovery (7.5%), and variable (18.7%). In multivariable logistic regression analyses, female gender, age 46 to 55 years, being not employed, former smoking, physical inactivity, an episode of CANS during the past 12 months, and high physical load in daily life (eg, often adopting awkward postures, frequent lifting, carrying, pushing, or pulling) were associated with the development of chronic CANS. Female gender, age 36 to 45 years, being not employed, and awkward postures in daily life were associated with persistent CANS. We conclude that chronic CANS represent a dynamic condition and affect the majority of the general population at least once in 15 years. Determinants associated with chronic CANS, especially physical load in daily life, can be used to develop preventive interventions and give guidance to treatment.

  16. CDU improvement technology of etching pattern using photo lithography

    NASA Astrophysics Data System (ADS)

    Tadokoro, Masahide; Shinozuka, Shinichi; Jyousaka, Megumi; Ogata, Kunie; Morimoto, Tamotsu; Konishi, Yoshitaka

    2008-03-01

    Semiconductor manufacturing technology has shifted towards finer design rules, and demands for critical dimension uniformity (CDU) of resist patterns have become greater than ever. One of the methods for improving Resist Pattern CDU is to control post-exposure bake (PEB) temperature. When ArF resist is used, there is a certain relationship between critical dimension (CD) and PEB temperature. By utilizing this relationship, Resist Pattern CDU can be improved through control of within-wafer temperature distribution in the PEB process. Resist Pattern CDU improvement contributes to Etching Pattern CDU improvement to a certain degree. To further improve Etching Pattern CDU, etcher-specific CD variation needs to be controlled. In this evaluation, 1. We verified whether etcher-specific CD variation can be controlled and consequently Etching Pattern CDU can be further improved by controlling resist patterns through PEB control. 2. Verifying whether Etching Pattern CDU improvement through has any effect on the reduction in wiring resistance variation. The evaluation procedure is as follows.1. Wafers with base film of Doped Poly-Si (D-Poly) were prepared. 2. Resist patterns were created on them. 3. To determine etcher-specific characteristics, the first etching was performed, and after cleaning off the resist and BARC, CD of etched D-Poly was measured. 4. Using the obtained within-wafer CD distribution of the etching patterns, within-wafer temperature distribution in the PEB process was modified. 5. Resist patterns were created again, followed by the second etching and cleaning, which was followed by CD measurement. We used Optical CD Measurement (OCD) for measurement of resist patterns and etching patterns as OCD is minimally affected by Line Edge Roughness (LER). As a result, 1. We confirmed the effect of Resist Pattern CD control through PEB control on the reduction in etcher-specific CD variation and the improvement in Etching Pattern CDU. 2. The improvement in Etching

  17. Pattern and determinants of domestic violence among prenatal clinic attendees in a referral centre, South-east Nigeria.

    PubMed

    Umeora, O U J; Dimejesi, B I; Ejikeme, B N; Egwuatu, V E

    2008-11-01

    Gender-based violence, though deeply entrenched in some cultures and religions, has remained a neglected area in health research in South-east Nigeria. This study assessed the prevalence, pattern and background factors precipitating domestic violence in a population of prenatal clinic attendees. This was a cross-sectional questionnaire-based study. Booked antenatal women were recruited into the study after informed consent. Trained research assistants administered the questionnaires in the local dialects of the women. Analysis was by the Epi Info Statistical Software package version 3.2.2 of 2005. A total of 500 women were involved in the study that spanned 3 months. Of these, 68 were exposed to gender-based violence. Verbal abuse/insult was the commonest form of male engendered violence. Others were sexual abuse, financial deprivation, threats and physical harm. Financial and domestic issues were the major sources of disagreements. Some 17.6% sustained physical injury, while all admitted to some degree of psychological trauma. Routine assessment in a non-judgemental way of antenatal population for gender-based violence is advocated. This will determine the true prevalence and pattern of domestic violence, and form a rational basis for the formulation of interventional strategies.

  18. Comparison of self-reported and observed water contact in an S. mansoni endemic village in Brazil.

    PubMed

    Friedman, J F; Kurtis, J D; McGarvey, S T; Fraga, A L; Silveira, A; Pizziolo, V; Gazzinelli, G; LoVerde, P; Corrêa-Oliveira, R

    2001-03-30

    Estimates of exposure are critical for immuno-epidemiologic and intervention studies in human schistosomiasis. Direct observation of human water contact patterns is both costly and time consuming. To address these issues, we determined whether individuals residing in a Schistosoma mansoni endemic village in Brazil could accurately self-report their water contact patterns. We compared the results of a water contact questionnaire to the present gold standard, direct observation of water contact in 86 volunteers, aged 8--29. We administered a survey to estimate volunteers' frequency and type of water contact and directly measured each volunteers' water contact patterns during 5 weeks of detailed water contact observations. We found a poor correlation between self reported frequency of contact and directly observed exposure (rho=0.119, P=NS). The questionnaire data was supplemented by information about average body surface area of exposure and duration of contact for specific activities derived from observations of this cohort. This 'supplemented questionnaire' data was significantly correlated with their exposure index (rho=0.227, P=0.05). It provides a starting point from which questionnaires may develop to provide a more cost-effective and less labor intensive method of assessing water contact exposure at the level of the individual.

  19. Seed dormancy responses to temperature relate to Nothofagus species distribution and determine temporal patterns of germination across altitudes in Patagonia.

    PubMed

    Arana, María V; Gonzalez-Polo, Marina; Martinez-Meier, Alejandro; Gallo, Leonardo A; Benech-Arnold, Roberto L; Sánchez, Rodolfo A; Batlla, Diego

    2016-01-01

    Seeds integrate environmental cues that modulate their dormancy and germination. Although many mechanisms have been identified in laboratory experiments, their contribution to germination dynamics in existing communities and their involvement in defining species habitats remain elusive. By coupling mathematical models with ecological data we investigated the contribution of seed temperature responses to the dynamics of germination of three Nothofagus species that are sharply distributed across different altitudes in the Patagonian Andes. Seed responsiveness to temperature of the three Nothofagus species was linked to the thermal characteristics of their preferred ecological niche. In their natural distribution range, there was overlap in the timing of germination of the species, which was restricted to mid-spring. By contrast, outside their species distribution range, germination was temporally uncoupled with altitude. This phenomenon was described mathematically by the interplay between interspecific differences in seed population thermal parameters and the range in soil thermic environments across different altitudes. The observed interspecific variations in seed responsiveness to temperature and its environmental regulation, constitute a major determinant of the dynamics of Nothofagus germination across elevations. This phenomenon likely contributes to the maintenance of patterns of species abundance across altitude by placing germinated seeds in a favorable environment for plant growth. © 2015 The Authors. New Phytologist © 2015 New Phytologist Trust.

  20. Experimental observation of chimera and cluster states in a minimal globally coupled network

    NASA Astrophysics Data System (ADS)

    Hart, Joseph D.; Bansal, Kanika; Murphy, Thomas E.; Roy, Rajarshi

    2016-09-01

    A "chimera state" is a dynamical pattern that occurs in a network of coupled identical oscillators when the symmetry of the oscillator population is broken into synchronous and asynchronous parts. We report the experimental observation of chimera and cluster states in a network of four globally coupled chaotic opto-electronic oscillators. This is the minimal network that can support chimera states, and our study provides new insight into the fundamental mechanisms underlying their formation. We use a unified approach to determine the stability of all the observed partially synchronous patterns, highlighting the close relationship between chimera and cluster states as belonging to the broader phenomenon of partial synchronization. Our approach is general in terms of network size and connectivity. We also find that chimera states often appear in regions of multistability between global, cluster, and desynchronized states.

  1. Experimental observation of chimera and cluster states in a minimal globally coupled network

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hart, Joseph D.; Department of Physics, University of Maryland, College Park, Maryland 20742; Bansal, Kanika

    A “chimera state” is a dynamical pattern that occurs in a network of coupled identical oscillators when the symmetry of the oscillator population is broken into synchronous and asynchronous parts. We report the experimental observation of chimera and cluster states in a network of four globally coupled chaotic opto-electronic oscillators. This is the minimal network that can support chimera states, and our study provides new insight into the fundamental mechanisms underlying their formation. We use a unified approach to determine the stability of all the observed partially synchronous patterns, highlighting the close relationship between chimera and cluster states as belongingmore » to the broader phenomenon of partial synchronization. Our approach is general in terms of network size and connectivity. We also find that chimera states often appear in regions of multistability between global, cluster, and desynchronized states.« less

  2. Pattern drilling exploration: Optimum pattern types and hole spacings when searching for elliptical shaped targets

    USGS Publications Warehouse

    Drew, L.J.

    1979-01-01

    In this study the selection of the optimum type of drilling pattern to be used when exploring for elliptical shaped targets is examined. The rhombic pattern is optimal when the targets are known to have a preferred orientation. Situations can also be found where a rectangular pattern is as efficient as the rhombic pattern. A triangular or square drilling pattern should be used when the orientations of the targets are unknown. The way in which the optimum hole spacing varies as a function of (1) the cost of drilling, (2) the value of the targets, (3) the shape of the targets, (4) the target occurrence probabilities was determined for several examples. Bayes' rule was used to show how target occurrence probabilities can be revised within a multistage pattern drilling scheme. ?? 1979 Plenum Publishing Corporation.

  3. Finger patterns and age of onset for the determination of the parent-of-origin in the transmission of schizophrenia

    PubMed Central

    Ponnudurai, R.; Jayakar, J.

    2015-01-01

    Summary: Dermatoglyphic traits which are reported to be largely determined by genes could be considered as phenotypic characterestics and if the same are expressed through generations in schizophrenic families it can be speculated to serve as genetic markers for schizophrenia. Another factor that might be influenced by genes is the age of onset of the illness in the offspring and the parent of origin. Objective: This study was aimed to elucidate the occurrence of identical finger patterns in the schizophrenic patients and their affected parents. The other objective was to assess the age of onset of the illness in them. Methods: Forty six schizophrenic patients in whom one of the parents was also affected with schizophrenia or related disorders were recruited. Of these pairs 29 were taken up for finger patterns analysis, with an equal number of control group pairs. 35 proband and parent pairs were investigated for the age of onset of the illness. Results: The frequency of occurrence of identical patterns in the right thumbs of proband and their affected mother pairs was significantly more than between the proband and their affected father pairs. Additionally, the number of identical patterns was also more in the right thumbs of proband and their affected mother pairs compared with the control group. The difference between the mean age of onset of the illness in the probands and their affected fathers was more than between the probands and their affected mothers. Conclusion: The genetic association of schizophrenic patients with the affected maternal side appear to be more stronger than with the paternal side. PMID:25657454

  4. Oscillatory patterns in temporal lobe reveal context reinstatement during memory search.

    PubMed

    Manning, Jeremy R; Polyn, Sean M; Baltuch, Gordon H; Litt, Brian; Kahana, Michael J

    2011-08-02

    Psychological theories of memory posit that when people recall a past event, they not only recover the features of the event itself, but also recover information associated with other events that occurred nearby in time. The events surrounding a target event, and the thoughts they evoke, may be considered to represent a context for the target event, helping to distinguish that event from similar events experienced at different times. The ability to reinstate this contextual information during memory search has been considered a hallmark of episodic, or event-based, memory. We sought to determine whether context reinstatement may be observed in electrical signals recorded from the human brain during episodic recall. Analyzing electrocorticographic recordings taken as 69 neurosurgical patients studied and recalled lists of words, we uncovered a neural signature of context reinstatement. Upon recalling a studied item, we found that the recorded patterns of brain activity were not only similar to the patterns observed when the item was studied, but were also similar to the patterns observed during study of neighboring list items, with similarity decreasing reliably with positional distance. The degree to which individual patients displayed this neural signature of context reinstatement was correlated with their tendency to recall neighboring list items successively. These effects were particularly strong in temporal lobe recordings. Our findings show that recalling a past event evokes a neural signature of the temporal context in which the event occurred, thus pointing to a neural basis for episodic memory.

  5. Developing Signal-Pattern-Recognition Programs

    NASA Technical Reports Server (NTRS)

    Shelton, Robert O.; Hammen, David

    2006-01-01

    Pattern Interpretation and Recognition Application Toolkit Environment (PIRATE) is a block-oriented software system that aids the development of application programs that analyze signals in real time in order to recognize signal patterns that are indicative of conditions or events of interest. PIRATE was originally intended for use in writing application programs to recognize patterns in space-shuttle telemetry signals received at Johnson Space Center's Mission Control Center: application programs were sought to (1) monitor electric currents on shuttle ac power busses to recognize activations of specific power-consuming devices, (2) monitor various pressures and infer the states of affected systems by applying a Kalman filter to the pressure signals, (3) determine fuel-leak rates from sensor data, (4) detect faults in gyroscopes through analysis of system measurements in the frequency domain, and (5) determine drift rates in inertial measurement units by regressing measurements against time. PIRATE can also be used to develop signal-pattern-recognition software for different purposes -- for example, to monitor and control manufacturing processes.

  6. The coordination patterns observed when two hands reach-to-grasp separate objects.

    PubMed

    Bingham, Geoffrey P; Hughes, Kirstie; Mon-Williams, Mark

    2008-01-01

    What determines coordination patterns when both hands reach to grasp separate objects at the same time? It is known that synchronous timing is preferred as the most stable mode of bimanual coordination. Nonetheless, normal unimanual prehension behaviour predicts asynchrony when the two hands reach towards unequal targets, with synchrony restricted to targets equal in size and distance. Additionally, sufficiently separated targets require sequential looking. Does synchrony occur in all cases because it is preferred in bimanual coordination or does asynchrony occur because of unimanual task constraints and the need for sequential looking? We investigated coordinative timing when participants (n = 8) moved their right (preferred) hand to the same object at a fixed distance but the left hand to objects of different width (3, 5, and 7 cm) and grip surface size (1, 2, and 3 cm) placed at different distances (20, 30, and 40 cm) over 270 randomised trials. The hand movements consisted of two components: (1) an initial component (IC) during which the hand reached towards the target while forming an appropriate grip aperture, stopping at (but not touching) the object; (2) a completion component (CC) during which the finger and thumb closed on the target. The two limbs started the IC together but did not interact until the deceleration phase when evidence of synchronisation began to appear. Nonetheless, asynchronous timing was present at the end of the IC and preserved through the CC even with equidistant targets. Thus, there was synchrony but requirements for visual information ultimately yielded asynchronous coordinative timing.

  7. Spatial patterns of ecosystem carbon residence time and NPP-driven carbon uptake in the conterminous United States

    NASA Astrophysics Data System (ADS)

    Zhou, Tao; Luo, Yiqi

    2008-09-01

    Ecosystem carbon (C) uptake is determined largely by C residence times and increases in net primary production (NPP). Therefore, evaluation of C uptake at a regional scale requires knowledge on spatial patterns of both residence times and NPP increases. In this study, we first applied an inverse modeling method to estimate spatial patterns of C residence times in the conterminous United States. Then we combined the spatial patterns of estimated residence times with a NPP change trend to assess the spatial patterns of regional C uptake in the United States. The inverse analysis was done by using the genetic algorithm and was based on 12 observed data sets of C pools and fluxes. Residence times were estimated by minimizing the total deviation between modeled and observed values. Our results showed that the estimated C residence times were highly heterogeneous over the conterminous United States, with most of the regions having values between 15 and 65 years; and the averaged C residence time was 46 years. The estimated C uptake for the whole conterminous United States was 0.15 P g C a-1. Large portions of the taken C were stored in soil for grassland and cropland (47-70%) but in plant pools for forests and woodlands (73-82%). The proportion of C uptake in soil was found to be determined primarily by C residence times and be independent of the magnitude of NPP increase. Therefore, accurate estimation of spatial patterns of C residence times is crucial for the evaluation of terrestrial ecosystem C uptake.

  8. Contact Patterns among High School Students

    PubMed Central

    Fournet, Julie; Barrat, Alain

    2014-01-01

    Face-to-face contacts between individuals contribute to shape social networks and play an important role in determining how infectious diseases can spread within a population. It is thus important to obtain accurate and reliable descriptions of human contact patterns occurring in various day-to-day life contexts. Recent technological advances and the development of wearable sensors able to sense proximity patterns have made it possible to gather data giving access to time-varying contact networks of individuals in specific environments. Here we present and analyze two such data sets describing with high temporal resolution the contact patterns of students in a high school. We define contact matrices describing the contact patterns between students of different classes and show the importance of the class structure. We take advantage of the fact that the two data sets were collected in the same setting during several days in two successive years to perform a longitudinal analysis on two very different timescales. We show the high stability of the contact patterns across days and across years: the statistical distributions of numbers and durations of contacts are the same in different periods, and we observe a very high similarity of the contact matrices measured in different days or different years. The rate of change of the contacts of each individual from one day to the next is also similar in different years. We discuss the interest of the present analysis and data sets for various fields, including in social sciences in order to better understand and model human behavior and interactions in different contexts, and in epidemiology in order to inform models describing the spread of infectious diseases and design targeted containment strategies. PMID:25226026

  9. Dithering Observations with JWST's NIRCam

    NASA Astrophysics Data System (ADS)

    Anderson, Jay

    2011-01-01

    Preparations for planning observations with JWST are already well underway at STScI. Many of the aspects of HST observation planning will carry over to JWST, but some things will be different. With HST, users are able to define arbitrary dither patterns (or use no dithering at all) in their Phase-2 submissions. This has allowed many observers to optimize their data quality for the particular science they are focused on. But, unfortunately, when the data reach the archive, the images are often less valuable to the community than they could be, either because of a lack of good dithering or because the association-based pipeline is not optimized for the particular dither pattern used. JWST will do things differently. Except in rare circumstances, such as planetary-transit observations, JWST users will be forced to dither, and they will have a limited set of dithering options to choose from. The NIRCam teams at STScI and UAz have designed a set of dither patterns that are flexible enough to meet the various anticipated science objectives, but they will also be homogeneous enough that the archive and association products will be of uniformly high quality.

  10. OSSE Evaluation of Prospective Aircraft Reconnaissance Flight Patterns and their Impact on Hurricane Forecasts

    NASA Astrophysics Data System (ADS)

    Ryan, K. E.; Bucci, L. R.; Christophersen, H.; Atlas, R. M.; Murillo, S.; Dodge, P.

    2015-12-01

    Each year, NOAA/AOML's Hurricane Research Division (HRD) conducts its Hurricane field Program in which observations are collected via NOAA aircraft to improve the understanding and prediction of hurricanes. Mission experiments suggest a variety of flight patterns and sampling strategies aimed towards their respective goals described by the Intensity Forecasting Experiment (IFEX; Rogers et al., BAMS, 2006, 2013), a collaborative effort among HRD, NHC, and EMC. Evaluating the potential impact of various trade-offs in design is valuable for determining the optimal air reconnaissance flight pattern for a given prospective mission. AOML's HRD has developed a system for performing regional Observing System Simulation Experiments (OSSEs) to assess the potential impact of proposed observing systems on hurricane track and intensity forecasts and analyses. This study focuses on investigating the potential impact of proposed aircraft reconnaissance observing system designs. Aircraft instrument and flight level retrievals were simulated from a regional WRF ARW Nature Run (Nolan et al., 2013) spanning 13 days, covering the life cycle of a rapidly intensifying Atlantic tropical cyclone. The aircraft trajectories are simulated in a variety of ways and are evaluated to investigate the potential impact of aircraft reconnaissance observations on hurricane track and intensity forecasts.

  11. Pattern formation in the iodate-sulfite-thiosulfate reaction-diffusion system.

    PubMed

    Liu, Haimiao; Pojman, John A; Zhao, Yuemin; Pan, Changwei; Zheng, Juhua; Yuan, Ling; Horváth, Attila K; Gao, Qingyu

    2012-01-07

    Sodium polyacrylate-induced pH pattern formation and starch-induced iodine pattern formation were investigated in the iodate-sulfite-thiosulfate (IST) reaction in a one-side fed disc gel reactor (OSFR). As binding agents of the autocatalyst of hydrogen ions or iodide ions, different content of sodium polyacrylate or starch has induced various types of pattern formation. We observed pH pulses, striped patterns, mixed spots and stripes, and hexagonal spots upon increasing the content of sodium polyacrylate and observed iodine pulses, branched patterns, and labyrinthine patterns upon increasing the starch content in the system. Coexistence of a pH front and an iodine front was also studied in a batch IST reaction-diffusion system. Both pH and iodine front instabilities were observed in the presence of sodium polyacrylate, i.e., cellular fronts and transient Turing structures resulting from the decrease in diffusion coefficients of activators. The mechanism of multiple feedback may explain the different patterns in the IST reaction-diffusion system.

  12. Ethnic patterns of hypospadias in New Zealand do not resemble those observed for cryptorchidism and testicular cancer: evidence of differential aetiology?

    PubMed

    Gurney, J K; Stanley, J; Shaw, C; Sarfati, D

    2016-01-01

    It has been proposed that hypospadias, cryptorchidism, poor semen quality and testicular cancer might share common prenatal causes. We have previously demonstrated similar ethnic patterns for the incidence of testicular cancer and cryptorchidism - a known risk factor for testicular cancer. If the underlying exposure(s) that cause hypospadias, cryptorchidism and testicular cancer are shared, then we would expect the incidence relationship between ethnic groups to follow the same pattern across all three conditions. We followed a birth cohort of 318 345 eligible male neonates born in New Zealand between 2000-2010, and linked routinely collected maternity records with inpatient hospitalization and mortality records through to 2011. We searched hospitalization records for diagnoses of hypospadias, and used mortality records for censoring. We used Poisson regression methods to compare the relative risk of hypospadias between ethnic groups, adjusting for perinatal risk factors and total person time. We observed that European/Other children had the highest risk of hypospadias, with Māori, Pacific and Asian boys having around 40% lower risk of disease compared with this group (adjusted relative risk [RR]: Māori 0.62, 95% CI 0.55-0.70; Pacific 0.62, 95% CI 0.53-0.72; Asian 0.57, 95% CI 0.47-0.69). This contrasts substantially with our previous observations for cryptorchidism and testicular cancer, where Māori males have the greatest risk. Our observations suggest that - at least in New Zealand - the exposures that drive the development of hypospadias may differ to those that that drive the development of cryptorchidism and/or testicular cancer. © 2015 American Society of Andrology and European Academy of Andrology.

  13. Chemical synthesis of La1 isolated from the venom of the scorpion Liocheles australasiae and determination of its disulfide bonding pattern.

    PubMed

    Nagao, Junya; Miyashita, Masahiro; Nakagawa, Yoshiaki; Miyagawa, Hisashi

    2015-08-01

    La1 is a 73-residue cysteine-rich peptide isolated from the scorpion Liocheles australasiae venom. Although La1 is the most abundant peptide in the venom, its biological function remains unknown. Here, we describe a method for efficient chemical synthesis of La1 using the native chemical ligation (NCL) strategy, in which three peptide components of less than 40 residues were sequentially ligated. The peptide thioester necessary for NCL was synthesized using an aromatic N-acylurea approach with Fmoc-SPPS. After completion of sequential NCL, disulfide bond formation was carried out using a dialysis method, in which the linear peptide dissolved in an acidic solution was dialyzed against a slightly alkaline buffer to obtain correctly folded La1. Next, we determined the disulfide bonding pattern of La1. Enzymatic and chemical digests of La1 without reduction of disulfide bonds were analyzed by liquid chromatography/mass spectrometry (LC/MS), which revealed two of four disulfide bond linkages. The remaining two linkages were assigned based on MS/MS analysis of a peptide fragment containing two disulfide bonds. Consequently, the disulfide bonding pattern of La1 was found to be similar to that of a von Willebrand factor type C (VWC) domain. To our knowledge, this is the first report of the experimental determination of the disulfide bonding pattern of peptides having a single VWC domain as well as their chemical synthesis. La1 synthesized in this study will be useful for investigation of its biological role in the venom. Copyright © 2015 European Peptide Society and John Wiley & Sons, Ltd.

  14. Spatiotemporal patterns in reaction-diffusion system and in a vibrated granular bed

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Swinney, H.L.; Lee, K.J.; McCormick, W.D.

    Experiments on a quasi-two-dimensional reaction-diffusion system reveal transitions from a uniform state to stationary hexagonal, striped, and rhombic spatial patterns. For other reactor conditions lamellae and self-replicating spot patterns are observed. These patterns form in continuously fed thin gel reactors that can be maintained indefinitely in well-defined nonequilibrium states. Reaction-diffusion models with two chemical species yield patterns similar to those observed in the experiments. Pattern formation is also being examined in vertically oscillated thin granular layers (typically 3-30 particle diameters deep). For small acceleration amplitudes, a granular layer is flat, but above a well-defined critical acceleration amplitude, spatial patterns spontaneouslymore » form. Disordered time-dependent granular patterns are observed as well as regular patterns of squares, stripes, and hexagons. A one-dimensional model consisting of a completely inelastic ball colliding with a sinusoidally oscillating platform provides a semi-quantitative description of most of the observed bifurcations between the different spatiotemporal regimes.« less

  15. General aviation air traffic pattern safety analysis

    NASA Technical Reports Server (NTRS)

    Parker, L. C.

    1973-01-01

    A concept is described for evaluating the general aviation mid-air collision hazard in uncontrolled terminal airspace. Three-dimensional traffic pattern measurements were conducted at uncontrolled and controlled airports. Computer programs for data reduction, storage retrieval and statistical analysis have been developed. Initial general aviation air traffic pattern characteristics are presented. These preliminary results indicate that patterns are highly divergent from the expected standard pattern, and that pattern procedures observed can affect the ability of pilots to see and avoid each other.

  16. Major determinants of the biogeographic pattern of the shallow-sea fauna

    NASA Technical Reports Server (NTRS)

    Valentine, J. W.; Jablonski, D.

    1982-01-01

    The benthic shallow-sea is defined as the region of sea floor lying between the supralittoral zone at the shoreline and the impingement of the thermocline separating a warm shallow and variable portion of the water column from rather homogeneous and constant cooler waters beneath. Three types of shallow-sea provinces can be recognized: (1) one-dimensional, linear shelves; (2) two-dimensional shelves; and (3) scattered islands in two-dimensional arrays. Dispersal powers of marine invertebrates vary with developmental mode, and patterns of dispersal, endemism and speciation vary among the different provincial types. Invertebrate developmental modes vary systematically with geography, and presumably are adaptive to environmental conditions. Clades with only a single mode of development tend to be restricted to regions appropriate to that mode, significantly affecting their biogeographic patterns. The consequences of geographic and other environmental changes are reviewed.

  17. On the relative role of fire and rainfall in determining vegetation patterns in tropical savannas: a simulation study

    NASA Astrophysics Data System (ADS)

    Spessa, Allan; Fisher, Rosie

    2010-05-01

    LPJ-GUESS vegetation model. Recently, SPIFTIRE has been coupled to the Ecosystem Demography (ED) model, which simulates global vegetation dynamics as part of the new land surface scheme JULES (Joint UK Environment Simulator) within the QUEST Earth System Model (http://www.quest-esm.ac.uk/). This study forms part of on-going work to further improve and test the ability of JULES to accurately simulate the terrestrial carbon cycle and land-atmosphere exchanges under different climates. Using the JULES (ED-SPITFIRE) model driven by observed climate (1901-2002), and focusing on large-scale rainfall gradients in the tropical savannas of west Africa, the Northern Territory (Australia) and central-southern Brazil, this study assesses: i) simulated versus observed vegetation dynamics and distributions, and ii) the relative importance of fire versus rainfall in determining vegetation patterns. A sensitivity analysis approach was used.

  18. Assessment of the relationship between satellite AOD and ground PM₁₀ measurement data considering synoptic meteorological patterns and Lidar data.

    PubMed

    Zeeshan, Muhammad; Kim Oanh, N T

    2014-03-01

    Correlation between satellite aerosol optical depth (AOD) and ground monitoring particulate matter (PM) depends on the meteorology that determines PM optical properties, its dispersion, accumulation and vertical distribution. This study presents a novel approach to analyze PM-AOD relationship considering the totality of meteorological factors expressed as synoptic patterns. Meteorological observations at 07:00 Bangkok time from 9 regional meteorological stations, in dry seasons (November-April) of 11 years (2000-2010), were used to categorize governing meteorology over Central Thailand into four categories representing the typical observed synoptic patterns. The MANOVA analysis showed that these patterns were statistically different. PM10 recorded at 22 air quality stations in Bangkok Metropolitan Region were examined which showed the highest levels for the days belonging to pattern 1, followed by pattern 4, both with presence of a high pressure ridge, while the minimum for pattern 2 when thermal lows dominated. Lidar aerosol backscatter profiles recorded at Pimai station were used as indicator of PM vertical distribution that showed similarity within each pattern. R(2) between MODIS and Sun photometer AODs at Pimai was above 0.8. Correlation coefficients (R) between MODIS AOD and corresponding 1h PM10 for clear sky days (cloudiness ≤ 3/10) were examined for each pattern in comparison with lump case. Significant improvements were observed for pattern 1, average R across 22 stations was 0.46 for Terra and 0.38 for Aqua AOD compared to lump case with R of 0.34 and 0.31, respectively. Comparable improvement was also observed for pattern 4. For pattern 2, R values were significantly reduced which may be caused by the deeper mixing layers and varying vertical profiles with overall low values of Lidar backscatter coefficients. Improved R values in pattern 1 and 4, which had highest PM10 in BMR, suggested a better potential of using MODIS AOD for PM10 monitoring with

  19. Determination of displacements and their derivatives from 3D fringe patterns via extended monogenic phasor method

    NASA Astrophysics Data System (ADS)

    Sciammarella, Cesar A.; Lamberti, Luciano

    2018-05-01

    For 1D signals, it is necessary to resort to a 2D abstract space because the concept of phase utilized in the retrieval of fringe pattern analysis information relies on the use of a vectorial function. Fourier and Hilbert transforms provide in-quadrature signals that lead to the very important basic concept of local phase. A 3D abstract space must hence be generated in order to analyze 2D signals. A 3D vector space in a Cartesian complex space is graphically represented by a Poincare sphere. In this study, the extension of the associated spaces is extended to 3D. A 4D hypersphere is defined for that purpose. The proposed approach is illustrated by determining the deformations of the heart left ventricle.

  20. Start Position Strongly Influences Fixation Patterns during Face Processing: Difficulties with Eye Movements as a Measure of Information Use

    PubMed Central

    Arizpe, Joseph; Kravitz, Dwight J.; Yovel, Galit; Baker, Chris I.

    2012-01-01

    Fixation patterns are thought to reflect cognitive processing and, thus, index the most informative stimulus features for task performance. During face recognition, initial fixations to the center of the nose have been taken to indicate this location is optimal for information extraction. However, the use of fixations as a marker for information use rests on the assumption that fixation patterns are predominantly determined by stimulus and task, despite the fact that fixations are also influenced by visuo-motor factors. Here, we tested the effect of starting position on fixation patterns during a face recognition task with upright and inverted faces. While we observed differences in fixations between upright and inverted faces, likely reflecting differences in cognitive processing, there was also a strong effect of start position. Over the first five saccades, fixation patterns across start positions were only coarsely similar, with most fixations around the eyes. Importantly, however, the precise fixation pattern was highly dependent on start position with a strong tendency toward facial features furthest from the start position. For example, the often-reported tendency toward the left over right eye was reversed for the left starting position. Further, delayed initial saccades for central versus peripheral start positions suggest greater information processing prior to the initial saccade, highlighting the experimental bias introduced by the commonly used center start position. Finally, the precise effect of face inversion on fixation patterns was also dependent on start position. These results demonstrate the importance of a non-stimulus, non-task factor in determining fixation patterns. The patterns observed likely reflect a complex combination of visuo-motor effects and simple sampling strategies as well as cognitive factors. These different factors are very difficult to tease apart and therefore great caution must be applied when interpreting absolute

  1. Multi-Satellite Orbit Determination Using Interferometric Observables with RF Localization Applications

    NASA Astrophysics Data System (ADS)

    Geeraert, Jeroen L.

    Very long baseline interferometry (VLBI) specifically same-beam interferometry (SBI), and dual-satellite geolocation are two fields of research not previously connected. This is due to the different application of each field, SBI is used for relative interplanetary navigation of two satellites while dual-satellite geolocation is used to locate the source of a radio frequency (RF) signal. In this dissertation however, we leverage both fields to create a novel method for multi-satellite orbit determination (OD) using time difference of arrival (TDOA) and frequency difference of arrival (FDOA) measurements. The measurements are double differenced between the satellites and the stations, in so doing, many of the common errors are canceled which can significantly improve measurement precision. Provided with this novel OD technique, the observability is first analyzed to determine the benefits and limitations of this method. In all but a few scenarios the measurements successfully reduce the covariance when examining the Cramer-Rao Lower Bound (CRLB). Reduced observability is encountered with geostationary satellites as their motion with respect to the stations is limited, especially when only one baseline is used. However, when using satellite pairs with greater relative motion with respect to the stations, even satellites that are close to, but not exactly in a geostationary orbit can be estimated accurately. We find that in a strong majority of cases the OD technique provides lower uncertainties and solutions far more accurate than using conventional OD observables such as range and range-rate while also not being affected by common errors and biases. We specifically examine GEO-GEO, GEO-MEO, and GEO-LEO dual-satellite estimation cases. The work is further extended by developing a relative navigation scenario where the chief satellite is assumed to have perfect knowledge, or some small amount of uncertainty considered but not estimated, while estimating the deputy

  2. Changes in the endopolyploidy pattern of different tissues in diploid and tetraploid Phalaenopsis aphrodite subsp. formosana (Orchidaceae).

    PubMed

    Chen, Wen-Huei; Tang, Ching-Yan; Lin, Tsai-Yun; Weng, Yuan-Chen; Kao, Yu-Lin

    2011-07-01

    Endopolyploidy is frequently observed during development in plant species. Patterns of endopolyploidy are diverse in the various organs of different plant species. However, little is known about the role of endopolyploidization and its significance in orchids. This study was undertaken to determine the extent of endopolyploidy in different tissues of the diploid and tetraploid genotypes of Phalaenopsis aphrodite subsp. formosana and to examine the factors that contribute to increased ploidy levels. Endopolyploidy occurs in various tissues of diploid and tetraploid orchids, at different developmental stages and under different culture conditions, as determined by flow cytometry. In this study, different patterns of endopolyploidy were observed in parts of the protocorms, leaves, roots and flowers. Endopolyploidy was found in all tissues studied except the pollinia and the tetraploid ovaries. A higher degree of endopolyploidy was observed in mature tissues compared to young tissues, greenhouse-grown plants compared to in vitro plants and diploid plants compared to tetraploid plants. We discuss the relationships between endopolyploidization and several factors related to plant growth, as well as some practical considerations of these findings. Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

  3. PATTERNS OF TREE DOMINANCE IN CONIFEROUS RIPARIAN FORESTS

    EPA Science Inventory

    This research quantified patterns of riparian tree dominance in western Oregon, USA and then compared the observed patterns with the expected patterns defined from the literature. Research was conducted at 110 riparian sites located on private and public lands. The field sites we...

  4. Detail Extraction from Electron Backscatter Diffraction Patterns

    NASA Astrophysics Data System (ADS)

    Basinger, Jay

    Cross-correlation based analysis of electron backscatter diffraction (EBSD) patterns and the use of simulated reference patterns has opened up entirely new avenues of insight into local lattice properties within EBSD scans. The benefits of accessing new levels of orientation resolution and multiple types of previously inaccessible data measures are accompanied with new challenges in characterizing microscope geometry and other error previously ignored in EBSD systems. The foremost of these challenges, when using simulated patterns in high resolution EBSD (HR-EBSD), is the determination of pattern center (the location on the sample from which the EBSD pattern originated) with sufficient accuracy to avoid the introduction of phantom lattice rotations and elastic strain into these highly sensitive measures. This dissertation demonstrates how to greatly improve pattern center determination. It also presents a method for the extraction of grain boundary plane information from single two-dimensional surface scans. These are accomplished through the use of previously un-accessed detail within EBSD images, coupled with physical models of the backscattering phenomena. A software algorithm is detailed and applied for the determination of pattern center with an accuracy of ˜0.03% of the phosphor screen width, or ˜10μm. This resolution makes it possible to apply a simulated pattern method (developed at BYU) in HR-EBSD, with several important benefits over the original HR-EBSD approach developed by Angus Wilkinson. Experimental work is done on epitaxially-grown silicon and germanium in order to gauge the precision of HR-EBSD with simulated reference patterns using the new pattern center calibration approach. It is found that strain resolution with a calibrated pattern center and simulated reference patterns can be as low as 7x10-4. Finally, Monte Carlo-based models of the electron interaction volume are used in conjunction with pattern-mixing-strength curves of line scans

  5. Do dietary patterns determine levels of vitamin B6, folate, and vitamin B12 intake and corresponding biomarkers in European adolescents? The Healthy Lifestyle in Europe by Nutrition in Adolescence (HELENA) study.

    PubMed

    Iglesia, Iris; Huybrechts, Inge; Mouratidou, Theodora; Santabárbara, Javier; Fernández-Alvira, Juan M; Santaliestra-Pasías, Alba M; Manios, Yannis; De la O Puerta, Alejandro; Kafatos, Anthony; Gottrand, Frédéric; Marcos, Ascensión; Sette, Stefania; Plada, Maria; Stehle, Peter; Molnár, Dénes; Widhalm, Kurt; Kersting, Mathilde; De Henauw, Stefaan; Moreno, Luis A; González-Gross, Marcela

    2018-06-01

    To determine dietary patterns (DPs) and explain the highest variance of vitamin B 6 , folate, and B 12 intake and related concentrations among European adolescents. A total of 2173 adolescents who participated in the Healthy Lifestyle in Europe by Nutrition in Adolescence study met the eligibility criteria for the vitamin B intake analysis (46% boys) and 586 adolescents for the biomarkers analysis (47% boys). Two non-consecutive, 24-h, dietary recalls were used to assess the mean intakes. Concentrations were measured by chromatography and immunoassay testing. A reduced rank regression was applied to elucidate the combined effect of food intake of vitamin B and related concentrations. The identified DPs (one per vitamin B intake and biomarker and by sex) explained a variability between 34.2% and 23.7% of the vitamin B intake and between 17.2% and 7% of the biomarkers. In the reduced rank regression models, fish, eggs, cheese, whole milk and buttermilk intakes were loaded positively for vitamin B intake in both sexes; however, soft drinks and chocolate were loaded negatively. For the biomarkers, a higher variability was observed in the patterns in terms of food loads such as alcoholic drinks, sugars, and soft drinks. Some food items were loaded differently between intakes and biomarkers such as fish products, which was loaded positively for intakes but negatively for plasma folate in girls. The identified DPs explained up to 34.2% and 17.2% of the variability of the vitamin B intake and plasma concentrations, respectively, in European adolescents. Further studies are needed to elucidate the factors that determine such patterns. Copyright © 2017 Elsevier Inc. All rights reserved.

  6. Use of the VLBI delay observable for orbit determination of Earth-orbiting VLBI satellites

    NASA Technical Reports Server (NTRS)

    Ulvestad, J. S.

    1992-01-01

    Very long-baseline interferometry (VLBI) observations using a radio telescope in Earth orbit were performed first in the 1980s. Two spacecraft dedicated to VLBI are scheduled for launch in 1995; the primary scientific goals of these missions will be astrophysical in nature. This article addresses the use of space VLBI delay data for the additional purpose of improving the orbit determination of the Earth-orbiting spacecraft. In an idealized case of quasi-simultaneous observations of three radio sources in orthogonal directions, analytical expressions are found for the instantaneous spacecraft position and its error. The typical position error is at least as large as the distance corresponding to the delay measurement accuracy but can be much greater for some geometries. A number of practical considerations, such as system noise and imperfect calibrations, set bounds on the orbit-determination accuracy realistically achievable using space VLBI delay data. These effects limit the spacecraft position accuracy to at least 35 cm (and probably 3 m or more) for the first generation of dedicated space VLBI experiments. Even a 35-cm orbital accuracy would fail to provide global VLBI astrometry as accurate as ground-only VLBI. Recommended charges in future space VLBI missions are unlikely to make space VLBI competitive with ground-only VLBI in global astrometric measurements.

  7. Pre-dispersal seed predation in a species-rich forest community: Patterns and the interplay with determinants

    Treesearch

    Yue Xu; Zehao Shen; Daoxin Li; Qinfeng Guo

    2015-01-01

    Pre-dispersal seed predation (PDSP) is commonly observed in woody plants, and recognized as a driver of seed production variability that is critical for successful regeneration. Earlier studies on PDSP and its determinants were mostly species specific, with community- level PDSP rarely estimated; and the interactions between the temporal...

  8. Cervical dystonia and pain: characteristics and treatment patterns from CD PROBE (Cervical Dystonia Patient Registry for Observation of OnabotulinumtoxinA Efficacy).

    PubMed

    Charles, P David; Adler, Charles H; Stacy, Mark; Comella, Cynthia; Jankovic, Joseph; Manack Adams, Aubrey; Schwartz, Marc; Brin, Mitchell F

    2014-07-01

    To compare profiles of subjects with and without cervical dystonia (CD)-associated pain, to evaluate the contribution of pain and the motor component of CD on quality of life, and to compare the initial botulinum toxin treatment paradigm between pain groups, baseline data were used from the CD Patient Registry for Observation of OnabotulinumtoxinA Efficacy (CD PROBE), a multicenter, prospective, observational registry designed to capture real-world practices and outcomes for onabotulinumtoxinA CD treatment. Subjects were divided into no/mild pain [Pain Numeric Rating Scale (PNRS) score 0-3] and moderate/severe pain groups (PNRS score 4-10). Descriptive and differential statistics were utilized to compare groups. 1,037 subjects completed the first treatment session, reported baseline botulinum toxin status, and completed baseline PNRS. Those with no/mild pain were significantly older at baseline. Those subjects with moderate/severe pain had higher Toronto Western Spasmodic Torticollis Rating Scale Severity (17.7 ± 5.1 vs. 16.2 ± 5.6, p < 0.0001) and Disability (12.7 ± 6.1 vs. 7.5 ± 5.6, p < 0.0001). CD subjects with moderate/severe pain received a higher mean dose (177.3 ± 82.9 vs. 158.0 ± 67.1 U, p = 0.0001) of onabotulinumtoxinA and were injected in more muscles (4.1 ± 1.4 vs. 3.7 ± 1.2, p < 0.0001) at initial treatment. CD PROBE clearly demonstrates the frequency of pain in CD and substantiates its importance when determining an optimal treatment paradigm. Future analyses of CD PROBE will further our understanding of the treatment patterns and outcomes related to onabotulinumtoxinA therapy for this disabling condition.

  9. Patterns And Determinants Of Breast Feeding Among Mother Infant Pairs In Dera Ghazi Khan, Pakistan.

    PubMed

    Khan, Moazzam Ali; Qureshi, Zubia; Khan, Kauser Aftab; Gill, Fouzia Nadeem

    2016-01-01

    Proper breastfeeding practices are effective ways for reducing childhood morbidity and mortality. The objective of the present study was to determine the patterns and explore the determinants associated with breast feeding practices among the nursing women in Dera Ghazi Khan. A cross sectional study was conducted on randomly selected lactating mother infant pairs in Dera Ghazi Khan. Structured questionnaire was used for data collection. Analysis was done by using SPSS, chi square test was applied to see the association between breast feeding practices and its determinants such as knowledge of breast feeding practices. Majority 372 (93%) of mothers mentioned that they had ever breastfed the youngest child. About 292 (73%) mothers gave colostrum to the child, and 48 (12%) exclusively breastfed. Weaning babies before four month of age was practiced by 84 (21%) of the mothers, 120 (55%) mothers started weaning at 4-6 months of child age, while 72 (18%) started to give additional food after baby turned six months old. Out of total 276 (69%) mothers reported that they had knowledge regarding breast feeding. Significant association was found between knowledge of breastfeeding and initiation and Exclusive Breast Feeding (EBF) practices (p-values <0.05). Income, family type, mode of delivery and assistance for child were significantly associated with initiation of breastfeeding within one hour after birth (p-value <0.001). Breast feeding practices in the studied area were not up to the mark. There is a strong need to improve the breastfeeding practices by Behavior Change Communication.

  10. Seasonal Diversity Patterns of a Coastal Synechococcus Population

    NASA Astrophysics Data System (ADS)

    Hunter-Cevera, K. R.; Sosik, H. M.; Neubert, M.; Hammar, K.; Post, A.

    2016-02-01

    Understanding how environmental and ecological factors determine phytoplankton species abundances requires knowledge of the diversity present within a population. For the important primary producer Synechococcus, clades demonstrate differences in temperature tolerance, light acclimation, grazer palatability, and more. Marine Synechococcus populations are often composed of more than one clade, and overall population dynamics will be governed by the types of cells present and by their individual physiological capabilities. We investigate the diversity of the Synechococcus assemblage at the Martha's Vineyard Coastal Observatory with high-throughput sequencing of the V6 hypervariable region of the 16S rRNA gene. Small nucleotide differences within this region allow for resolution of distinct phylotypes that can have a direct correspondence to the well-defined Synechococcus clades. From a three-year time series, we find that the Synechococcus population is dominated by 5 distinct phylotypes, and that each type exhibits a repeatable, seasonal pattern in relative abundance. We use compositional data analysis techniques to investigate the relationships between these patterns and environmental factors. We further interpret these patterns in the context of Synechococcus population dynamics assessed by automated, submersible flow cytometry (FlowCytobot). Observed diel changes in cell size distributions, coupled with a validated matrix population model, provide estimates of in situ population division rates. We find strong evidence that the main seasonal diversity patterns are governed by temperature, but that biological loss agents likely shape the diversity structure for certain times of year. For some phylotypes, relative abundance patterns are also related to light and nutrients. The composition of Synechococcus over the annual cycle appears to directly affect seasonal features of cell abundance patterns, such as the spring bloom.

  11. Practical relevance of pattern uniqueness in forensic science.

    PubMed

    Jayaprakash, Paul T

    2013-09-10

    Uniqueness being unprovable, it has recently been argued that individualization in forensic science is irrelevant and, probability, as applied for DNA profiles, should be applied for all identifications. Critiques against uniqueness have omitted physical matching, a realistic and tangible individualization that supports uniqueness. Describing case examples illustrating pattern matches including physical matching, it is indicated that individualizations are practically relevant for forensic science as they establish facts on a definitive basis providing firm leads benefitting criminal investigation. As a tenet of forensic identification, uniqueness forms a fundamental paradigm relevant for individualization. Evidence on the indeterministic and stochastic causal pathways of characteristics in patterns available in the related fields of science sufficiently supports the proposition of uniqueness. Characteristics involved in physical matching and matching achieved in patterned evidence existing in the state of nature are not events amenable for counting; instead these are ensemble of visible units occupying the entire pattern area stretching the probability of re-occurrence of a verisimilitude pattern into infinity offering epistemic support to uniqueness. Observational methods are as respectable as instrumental or statistical methods since they are capable of generating results that are tangible and obviously valid as in physical matching. Applying the probabilistic interpretation used for DNA profiles to the other patterns would be unbefitting since these two are disparate, the causal pathways of the events, the loci, in the manipulated DNA profiles being determinable. While uniqueness enables individualizations, it does not vouch for eliminating errors. Instead of dismissing uniqueness and individualization, accepting errors as human or system failures and seeking remedial measures would benefit forensic science practice and criminal investigation. Copyright © 2013

  12. Patterns of treatment response in newly diagnosed epilepsy

    PubMed Central

    Brodie, M.J.; Barry, S.J.E.; Bamagous, G.A.; Norrie, J.D.

    2012-01-01

    Objective: To delineate the temporal patterns of outcome and to determine the probability of seizure freedom with successive antiepileptic drug regimens in newly diagnosed epilepsy. Methods: Patients in whom epilepsy was diagnosed and the first antiepileptic drug prescribed between July 1, 1982, and April 1, 2006, were followed up until March 31, 2008. Outcomes were categorized into 4 patterns: A) early and sustained seizure freedom; B) delayed but sustained seizure freedom; C) fluctuation between periods of seizure freedom and relapse; and D) seizure freedom never attained. Probability of seizure freedom with successive drug regimens was compared. Seizure freedom was defined as no seizures for ≥1 year. Results: A total of 1,098 patients were included (median age 32 years, range 9–93). At the last clinic visit, 749 (68%) patients were seizure-free, 678 (62%) on monotherapy. Outcome pattern A was observed in 408 (37%), pattern B in 246 (22%), pattern C in 172 (16%), and pattern D in 272 (25%) patients. There was a higher probability of seizure freedom in patients receiving 1 compared to 2 drug regimens, and 2 compared to 3 regimens (p < 0.001). The difference was greater among patients with symptomatic or cryptogenic than with idiopathic epilepsy. Less than 2% of patients became seizure-free on subsequent regimens but a few did so on their sixth or seventh regimen. Conclusions: Most patients with newly diagnosed epilepsy had a constant course which could usually be predicted early. The chance of seizure freedom declined with successive drug regimens, most markedly from the first to the third and among patients with localization-related epilepsies. PMID:22573629

  13. Measuring patterns in team interaction sequences using a discrete recurrence approach.

    PubMed

    Gorman, Jamie C; Cooke, Nancy J; Amazeen, Polemnia G; Fouse, Shannon

    2012-08-01

    Recurrence-based measures of communication determinism and pattern information are described and validated using previously collected team interaction data. Team coordination dynamics has revealed that"mixing" team membership can lead to flexible interaction processes, but keeping a team "intact" can lead to rigid interaction processes. We hypothesized that communication of intact teams would have greater determinism and higher pattern information compared to that of mixed teams. Determinism and pattern information were measured from three-person Uninhabited Air Vehicle team communication sequences over a series of 40-minute missions. Because team members communicated using push-to-talk buttons, communication sequences were automatically generated during each mission. The Composition x Mission determinism effect was significant. Intact teams' determinism increased over missions, whereas mixed teams' determinism did not change. Intact teams had significantly higher maximum pattern information than mixed teams. Results from these new communication analysis methods converge with content-based methods and support our hypotheses. Because they are not content based, and because they are automatic and fast, these new methods may be amenable to real-time communication pattern analysis.

  14. Investigating body patterning in aquarium-raised flamboyant cuttlefish (Metasepia pfefferi)

    PubMed Central

    MacDonald, Christy

    2016-01-01

    Cuttlefish are known for their ability to quickly alter their total appearance, or body pattern, to camouflage or to communicate with predators, prey and conspecifics. The body patterns of some species have been extensively documented to gain a better understanding of their behaviors. However, the flamboyant cuttlefish (Metasepia pfefferi) is largely unstudied. Recently, aquarists have been able to breed, house and display M. pfefferi, giving researchers ample opportunities to study their behavior under those conditions. This study aimed to identify the dorsally-visible components of the body patterns used by 5 sexually-mature, freely-behaving, F5 generation M. pfefferi in their home aquarium at The Seas in Epcot at Walt Disney World Resorts®, Lake Buena Vista, FL, USA. Furthermore, we aimed to determine the most probable patterns used by this population of animals and to create a database of components that can be used in future behavioral studies. We found that this population of M. pfefferi use a combination of 7 textural, 14 postural, 7 locomotor and between 42 and 75 chromatic components in their home aquarium. Using maximum likelihood analysis and AutoClass@IJM software, we found that these components combine to generate 11 distinct body patterns. The software was able to sort 98% of the live animal observations into one of the 11 patterns with 90% confidence and 88% of observations with 99% confidence. Unusually for cuttlefish, 8 of the 11 identified patterns contained at least one “traveling” component (i.e., traveling waves or blinking spots) in which the colors on the skin appeared to travel on the animal’s mantle. In other species, these components are generally seen during hunting or aggression, but this population of M. pfefferi uses them frequently during a variety of contexts in their home aquarium. With few published data on the behavior of M. pfefferi in their natural environment, we cannot compare the behavior of the tank-raised individuals

  15. Apple skin patterning is associated with differential expression of MYB10

    PubMed Central

    2011-01-01

    Background Some apple (Malus × domestica Borkh.) varieties have attractive striping patterns, a quality attribute that is important for determining apple fruit market acceptance. Most apple cultivars (e.g. 'Royal Gala') produce fruit with a defined fruit pigment pattern, but in the case of 'Honeycrisp' apple, trees can produce fruits of two different kinds: striped and blushed. The causes of this phenomenon are unknown. Results Here we show that striped areas of 'Honeycrisp' and 'Royal Gala' are due to sectorial increases in anthocyanin concentration. Transcript levels of the major biosynthetic genes and MYB10, a transcription factor that upregulates apple anthocyanin production, correlated with increased anthocyanin concentration in stripes. However, nucleotide changes in the promoter and coding sequence of MYB10 do not correlate with skin pattern in 'Honeycrisp' and other cultivars differing in peel pigmentation patterns. A survey of methylation levels throughout the coding region of MYB10 and a 2.5 Kb region 5' of the ATG translation start site indicated that an area 900 bp long, starting 1400 bp upstream of the translation start site, is highly methylated. Cytosine methylation was present in all three contexts, with higher methylation levels observed for CHH and CHG (where H is A, C or T) than for CG. Comparisons of methylation levels of the MYB10 promoter in 'Honeycrisp' red and green stripes indicated that they correlate with peel phenotypes, with an enrichment of methylation observed in green stripes. Conclusions Differences in anthocyanin levels between red and green stripes can be explained by differential transcript accumulation of MYB10. Different levels of MYB10 transcript in red versus green stripes are inversely associated with methylation levels in the promoter region. Although observed methylation differences are modest, trends are consistent across years and differences are statistically significant. Methylation may be associated with the presence

  16. Patterns Exploration on Patterns of Empirical Herbal Formula of Chinese Medicine by Association Rules

    PubMed Central

    Huang, Li; Yuan, Jiamin; Yang, Zhimin; Xu, Fuping; Huang, Chunhua

    2015-01-01

    Background. In this study, we use association rules to explore the latent rules and patterns of prescribing and adjusting the ingredients of herbal decoctions based on empirical herbal formula of Chinese Medicine (CM). Materials and Methods. The consideration and development of CM prescriptions based on the knowledge of CM doctors are analyzed. The study contained three stages. The first stage is to identify the chief symptoms to a specific empirical herbal formula, which can serve as the key indication for herb addition and cancellation. The second stage is to conduct a case study on the empirical CM herbal formula for insomnia. Doctors will add extra ingredients or cancel some of them by CM syndrome diagnosis. The last stage of the study is to divide the observed cases into the effective group and ineffective group based on the assessed clinical effect by doctors. The patterns during the diagnosis and treatment are selected by the applied algorithm and the relations between clinical symptoms or indications and herb choosing principles will be selected by the association rules algorithm. Results. Totally 40 patients were observed in this study: 28 patients were considered effective after treatment and the remaining 12 were ineffective. 206 patterns related to clinical indications of Chinese Medicine were checked and screened with each observed case. In the analysis of the effective group, we used the algorithm of association rules to select combinations between 28 herbal adjustment strategies of the empirical herbal formula and the 190 patterns of individual clinical manifestations. During this stage, 11 common patterns were eliminated and 5 major symptoms for insomnia remained. 12 association rules were identified which included 5 herbal adjustment strategies. Conclusion. The association rules method is an effective algorithm to explore the latent relations between clinical indications and herbal adjustment strategies for the study on empirical herbal formulas

  17. Determining the critical effective temperature and heat dispersal pattern in monopolar radiofrequency ablation using temperature-time integration

    PubMed Central

    TSENG, HOW; LIN, SEY-EN; CHANG, YEN-LIANG; CHEN, MING-HSU; HUNG, SHIH-HAN

    2016-01-01

    The radiofrequency ablation (RFA) lesion size is posited to be disproportionate to the total delivered energy, and temperature-time integration (TTI) may have a more critical effect on lesion size. The present study aimed to evaluate this hypothesis by determining the temperature threshold and temperature distribution over tissues during the RFA lesioning process. Using an ex vivo chicken tissue model and an in vivo rabbit model with RFA applied for 2 min under various target temperature settings, the resultant lesions were evaluated histologically using Masson's trichrome stain. The temperature distribution over the tissue during the RFA lesioning process was also determined using a VT02 Visual IR Thermometer. It was revealed that the thermal injury threshold for RFA in the chicken tissues was ~65°C, but that it ranged from 55–65°C in mammals. Using infra-red thermal imaging, the temperature gradient (from the center to the periphery) during the RFA lesioning process demonstrated a uniform heat diffusion pattern. This data supports the proposed hypothesis that TTI is a critical parameter in determining RFA lesion size and can be applied clinically using the following equation: [Target temperature − 55 (°C)] × time (sec) is proportional to RFA lesion size. PMID:26997990

  18. Understanding tropical upper tropospheric warming: The role of SSTs, convective parameterizations, and observational uncertainties

    NASA Astrophysics Data System (ADS)

    Po-Chedley, S.; Thorsen, T. J.; Fu, Q.

    2015-12-01

    Recent research has compared CMIP5 general circulation model (GCM) simulations with satellite observations of warming in the tropical upper troposphere relative to the lower-middle troposphere. Although the pattern of SST warming is important, this research demonstrated that models overestimate increases in static stability between the mid- to upper- tropical troposphere, even when they are forced with historical sea surface temperatures. This discrepancy between satellite-borne microwave sounding unit measurements (MSU) and GCMs is important because it has implications for the strength of the lapse rate and water vapor feedback. The apparent model-observational difference for changes in static stability in the tropical upper troposphere represents an important problem, but it is not clear whether the difference is a result of common biases in GCMs, biases in observational datasets, or both. In this work, we will use GCM simulations to examine the importance of the spatial pattern of SST warming and different convective parameterizations in determining the lapse rate changes in tropical troposphere. We will also consider uncertainties in MSU satellite observations, including changes in the diurnal sampling of temperature and instrument calibration biases when comparing GCMs with the observed record.

  19. Determination of hyperfine-induced transition rates from observations of a planetary nebula.

    PubMed

    Brage, Tomas; Judge, Philip G; Proffitt, Charles R

    2002-12-31

    Observations of the planetary nebula NGC3918 made with the STIS instrument on the Hubble Space Telescope reveal the first unambiguous detection of a hyperfine-induced transition 2s2p 3P(o)(0)-->2s2 1S0 in the berylliumlike emission line spectrum of N IV at 1487.89 A. A nebular model allows us to confirm a transition rate of 4x10(-4) sec(-1)+/-33% for this line. The measurement represents the first independent confirmation of the transition rate of hyperfine-induced lines in low ionization stages, and it provides support for the techniques used to compute these transitions for the determination of very low densities and isotope ratios.

  20. Pattern formation with proportionate growth

    NASA Astrophysics Data System (ADS)

    Dhar, Deepak

    It is a common observation that as baby animals grow, different body parts grow approximately at same rate. This property, called proportionate growth is remarkable in that it is not encountered easily outside biology. The models of growth that have been studied in Physics so far, e.g diffusion -limited aggregation, surface deposition, growth of crystals from melt etc. involve only growth at the surface, with the inner structure remaining frozen. Interestingly, patterns formed in growing sandpiles provide a very wide variety of patterns that show proportionate growth. One finds patterns with different features, with sharply defined boundaries. In particular, even with very simple rules, one can produce patterns that show striking resemblance to those seen in nature. We can characterize the asymptotic pattern exactly in some special cases. I will discuss in particular the patterns grown on noisy backgrounds. Supported by J. C. Bose fellowship from DST (India).

  1. Practice Patterns for Chronic Respiratory Diseases in the Asia-Pacific Region: A Cross-Sectional Observational Study.

    PubMed

    Wang, De Yun; Cho, Sang-Heon; Lin, Horng-Chyuan; Ghoshal, Aloke Gopal; Bin Abdul Muttalif, Abdul Razak; Thanaviratananich, Sanguansak; Tunceli, Kaan; Urdaneta, Eduardo; Zhang, Dongmu; Faruqi, Rab

    2018-06-06

    Allergic rhinitis (AR), asthma, chronic obstructive pulmonary disease (COPD), and rhinosinusitis are common and little studied in the Asia-Pacific region. We sought to investigate real-world practice patterns for these respiratory diseases in India, Korea, Malaysia, Singapore, Taiwan, and Thailand. This cross-sectional observational study enrolled adults (age ≥18 years) presenting to general practitioners (GP) or specialists for physician-diagnosed AR, asthma, COPD, or rhinosinusitis. Physicians and patients completed study-specific surveys at one visit, recording patient characteristics, health-related quality of life (QoL), work impairment, and healthcare resource use. Findings by country and physician category (GP or specialist) were summarized. Of the 13,902 patients screened, 7,243 (52%) presented with AR (18%), asthma (18%), COPD (7%), or rhinosinusitis (9%); 5,250 of the 7,243 (72%) patients were eligible for this study. Most eligible patients (70-100%) in India, Korea, Malaysia, and Singapore attended GP, while most (83-85%) in Taiwan and Thailand attended specialists. From 42% (rhinosinusitis) to 67% (AR) of new diagnoses were made by GP. On average, patients with COPD reported the worst health-related QoL, particularly to GP. Median losses of work productivity for each condition and activity impairment, except for asthma, were numerically greater for patients presenting to GP vs. specialists. GP prescribed more antibiotics for AR and asthma, and fewer intranasal corticosteroids for AR, than specialists (p < 0.001 for all comparisons). Our findings, albeit mostly descriptive and influenced by between-country differences, suggest that practice patterns differ between physician types, and the disease burden may be substantial for patients presenting in general practice. © 2018 S. Karger AG, Basel.

  2. Formation mechanism of complex pattern on fishes' skin

    NASA Astrophysics Data System (ADS)

    Li, Xia; Liu, Shuhua

    2009-10-01

    In this paper, the formation mechanism of the complex patterns observed on the skin of fishes has been investigated by a two-coupled reaction diffusion model. The effects of coupling strength between two layers play an important role in the pattern-forming process. It is found that only the epidermis layer can produce complicated patterns that have structures on more than one length scale. These complicated patterns including super-stripe pattern, mixture of spots and stripe, and white-eye pattern are similar to the pigmentation patterns on fishes' skin.

  3. Mass Determination of Pluto and Charon from New Horizon REX Radio Science Observations

    NASA Astrophysics Data System (ADS)

    Pätzold, M.; Andert, T. P.; Tyler, G. L.; Bird, M. K.; Hinson, D. H.; Linscott, I. R.

    2013-09-01

    The anticipated 14 July 2015 New Horizons flythrough of the Pluto system provides the first opportunity to determine both the total system mass and the individual masses of Pluto and Charon by direct observation. This will be accomplished by use of: i) two-way Doppler radio frequency tracking data during intervals along the fly-in and -out trajectory, and ii) one-way uplink Doppler frequency recorded by the on-board radio science instrument, REX, during the day of closest approaches to Pluto and Charon. Continuous tracking is not feasible as a result of pointing sharing with the instruments during the encounter phase. Needed radio tracking will be obtained during time slots shared with i) two-way Doppler tracking for navigation, ii) 'plasma rolls' with the spacecraft antenna pointing to Earth, and iii) during the ingress and egress phases of the occultations. Simulations of the NH encounter indicate the potential accuracies of the combined and individual mass determinations of Pluto and Charon in the order of 0.1%.

  4. Precise orbit determination for NASA's earth observing system using GPS (Global Positioning System)

    NASA Technical Reports Server (NTRS)

    Williams, B. G.

    1988-01-01

    An application of a precision orbit determination technique for NASA's Earth Observing System (EOS) using the Global Positioning System (GPS) is described. This technique allows the geometric information from measurements of GPS carrier phase and P-code pseudo-range to be exploited while minimizing requirements for precision dynamical modeling. The method combines geometric and dynamic information to determine the spacecraft trajectory; the weight on the dynamic information is controlled by adjusting fictitious spacecraft accelerations in three dimensions which are treated as first order exponentially time correlated stochastic processes. By varying the time correlation and uncertainty of the stochastic accelerations, the technique can range from purely geometric to purely dynamic. Performance estimates for this technique as applied to the orbit geometry planned for the EOS platforms indicate that decimeter accuracies for EOS orbit position may be obtainable. The sensitivity of the predicted orbit uncertainties to model errors for station locations, nongravitational platform accelerations, and Earth gravity is also presented.

  5. Hidden Patterns of Light Revealed by Spitzer

    NASA Image and Video Library

    2012-06-07

    Astronomers have uncovered patterns of light that appear to be from the first stars and galaxies that formed in the universe. The light patterns were hidden within a strip of sky observed by NASA Spitzer Space Telescope.

  6. Interpreting multiscale domains of tree cover disturbance patterns in North America

    Treesearch

    Kurt Riitters; Jennifer K. Costanza; Brian Buma

    2017-01-01

    Spatial patterns at multiple observation scales provide a framework to improve understanding of pattern-related phenomena. However, the metrics that are most sensitive to local patterns are least likely to exhibit consistent scaling relations with increasing extent (observation scale). A conceptual framework based on multiscale domains (i.e., geographic locations...

  7. Recurrence Methods for the Identification of Morphogenetic Patterns

    PubMed Central

    Facchini, Angelo; Mocenni, Chiara

    2013-01-01

    This paper addresses the problem of identifying the parameters involved in the formation of spatial patterns in nonlinear two dimensional systems. To this aim, we perform numerical experiments on a prototypical model generating morphogenetic Turing patterns, by changing both the spatial frequency and shape of the patterns. The features of the patterns and their relationship with the model parameters are characterized by means of the Generalized Recurrence Quantification measures. We show that the recurrence measures Determinism and Recurrence Entropy, as well as the distribution of the line lengths, allow for a full characterization of the patterns in terms of power law decay with respect to the parameters involved in the determination of their spatial frequency and shape. A comparison with the standard two dimensional Fourier transform is performed and the results show a better performance of the recurrence indicators in identifying a reliable connection with the spatial frequency of the patterns. Finally, in order to evaluate the robustness of the estimation of the power low decay, extensive simulations have been performed by adding different levels of noise to the patterns. PMID:24066062

  8. Pattern of access determines influence of junk food diet on cue sensitivity and palatability.

    PubMed

    Kosheleff, Alisa R; Araki, Jingwen; Hsueh, Jennifer; Le, Andrew; Quizon, Kevin; Ostlund, Sean B; Maidment, Nigel T; Murphy, Niall P

    2018-04-01

    Like drug addiction, cues associated with palatable foods can trigger food-seeking, even when sated. However, whether susceptibility to the motivating influence of food-related cues is a predisposing factor in overeating or a consequence of poor diet is difficult to determine in humans. Using a rodent model, we explored whether a highly palatable 'junk food' diet impacts responses to reward-paired cues in a Pavlovian-to-instrumental transfer test, using sweetened condensed milk (SCM) as the reward. The hedonic impact of SCM consumption was also assessed by analyzing licking microstructure. To probe the effects of pattern and duration of junk food exposure, we provided rats with either regular chow ad libitum (controls) or chow plus access to junk food for either 2 or 24 h per day for 1, 3, or 6 weeks. We also examined how individual susceptibility to weight gain related to these measures. Rats provided 24 h access to the junk food diet were insensitive to the motivational effects of a SCM-paired cue when tested sated even though their hedonic experience upon reward consumption was similar to controls. In contrast, rats provided restricted, 2 h access to junk food exhibited a cue generalization phenotype under sated conditions, lever-pressing with increased vigor in response to both a SCM-paired cue, and a cue not previously paired with reward. Hedonic response was also significantly higher in these animals relative to controls. These data demonstrate that the pattern of junk food exposure differentially alters the hedonic impact of palatable foods and susceptibility to the motivating influence of cues in the environment to promote food-seeking actions when sated, which may be consequential for understanding overeating and obesity. Copyright © 2017 Elsevier Ltd. All rights reserved.

  9. Habitat degradation may affect niche segregation patterns in lizards

    NASA Astrophysics Data System (ADS)

    Pelegrin, N.; Chani, J. M.; Echevarria, A. L.; Bucher, E. H.

    2013-08-01

    Lizards partition resources in three main niche dimensions: time, space and food. Activity time and microhabitat use are strongly influenced by thermal environment, and may differ between species according to thermal requirements and tolerance. As thermal characteristics are influenced by habitat structure, microhabitat use and activity of lizards can change in disturbed habitats. We compared activity and microhabitat use of two abundant lizard species of the Semi-arid Chaco of Argentina between a restored and a highly degraded Chaco forest, to determine how habitat degradation affects lizard segregation in time and space, hypothesizing that as activity and microhabitat use of lizards are related to habitat structure, activity and microhabitat use of individual species can be altered in degraded habitats, thus changing segregation patterns between them. Activity changed from an overlapped pattern in a restored forest to a segregated pattern in a degraded forest. A similar trend was observed for microhabitat use, although to a less extent. No correlation was found between air temperature and lizard activity, but lizard activity varied along the day and among sites. Contrary to what was believed, activity patterns of neotropical diurnal lizards are not fixed, but affected by multiple factors related to habitat structure and possibly to interspecific interactions. Changes in activity patterns and microhabitat use in degraded forests may have important implications when analyzing the effects of climate change on lizard species, due to synergistic effects.

  10. Recognition of surface lithologic and topographic patterns in southwest Colorado with ADP techniques

    NASA Technical Reports Server (NTRS)

    Melhorn, W. N.; Sinnock, S.

    1973-01-01

    Analysis of ERTS-1 multispectral data by automatic pattern recognition procedures is applicable toward grappling with current and future resource stresses by providing a means for refining existing geologic maps. The procedures used in the current analysis already yield encouraging results toward the eventual machine recognition of extensive surface lithologic and topographic patterns. Automatic mapping of a series of hogbacks, strike valleys, and alluvial surfaces along the northwest flank of the San Juan Basin in Colorado can be obtained by minimal man-machine interaction. The determination of causes for separable spectral signatures is dependent upon extensive correlation of micro- and macro field based ground truth observations and aircraft underflight data with the satellite data.

  11. Ground level air convection produces frost damage patterns in turfgrass

    NASA Astrophysics Data System (ADS)

    Ackerson, Bruce J.; Beier, Richard A.; Martin, Dennis L.

    2015-11-01

    Frost injury patterns are commonly observed on the warm-season turfgrass species bermudagrass ( Cynodon species Rich.), zoysiagrass ( Zoysia species Willd.), and buffalograss [ Bouteloua dactyloides (Nutt.) J.T. Columbus] in cool-temperate and subtropical zones. Qualitative observations of these injury patterns are presented and discussed. A model for the formation of such patterns based on thermal instability and convection of air is presented. The characteristic length scale of the observed frost pattern injury requires a temperature profile that decreases with height from the soil to the turfgrass canopy surface followed by an increase in temperature with height above the turfgrass canopy. This is justified by extending the earth temperature theory to include a turf layer with atmosphere above it. Then the theory for a thermally unstable layer beneath a stable region by Ogura and Kondo is adapted to a turf layer to include different parameter values for pure air, as well as for turf, which is treated as a porous medium. The earlier porous medium model of Thompson and Daniels proposed to explain frost injury patterns is modified to give reasonable agreement with observed patterns.

  12. Ground level air convection produces frost damage patterns in turfgrass.

    PubMed

    Ackerson, Bruce J; Beier, Richard A; Martin, Dennis L

    2015-11-01

    Frost injury patterns are commonly observed on the warm-season turfgrass species bermudagrass (Cynodon species Rich.), zoysiagrass (Zoysia species Willd.), and buffalograss [Bouteloua dactyloides (Nutt.) J.T. Columbus] in cool-temperate and subtropical zones. Qualitative observations of these injury patterns are presented and discussed. A model for the formation of such patterns based on thermal instability and convection of air is presented. The characteristic length scale of the observed frost pattern injury requires a temperature profile that decreases with height from the soil to the turfgrass canopy surface followed by an increase in temperature with height above the turfgrass canopy. This is justified by extending the earth temperature theory to include a turf layer with atmosphere above it. Then the theory for a thermally unstable layer beneath a stable region by Ogura and Kondo is adapted to a turf layer to include different parameter values for pure air, as well as for turf, which is treated as a porous medium. The earlier porous medium model of Thompson and Daniels proposed to explain frost injury patterns is modified to give reasonable agreement with observed patterns.

  13. Multiplex titration RT-PCR: rapid determination of gene expression patterns for a large number of genes

    NASA Technical Reports Server (NTRS)

    Nebenfuhr, A.; Lomax, T. L.

    1998-01-01

    We have developed an improved method for determination of gene expression levels with RT-PCR. The procedure is rapid and does not require extensive optimization or densitometric analysis. Since the detection of individual transcripts is PCR-based, small amounts of tissue samples are sufficient for the analysis of expression patterns in large gene families. Using this method, we were able to rapidly screen nine members of the Aux/IAA family of auxin-responsive genes and identify those genes which vary in message abundance in a tissue- and light-specific manner. While not offering the accuracy of conventional semi-quantitative or competitive RT-PCR, our method allows quick screening of large numbers of genes in a wide range of RNA samples with just a thermal cycler and standard gel analysis equipment.

  14. Turn Allocation Patterns and Learning Opportunities

    ERIC Educational Resources Information Center

    Xie, Xiaoyan

    2011-01-01

    Drawing on data from three English classrooms at two Chinese universities, this paper documents the turn-taking patterns that the teachers and students developed over time and explores how these patterns affected students' opportunities to participate in classroom discourse. The data were collected through observations, audio- and video-taping,…

  15. Comparison of Observed Spatio-temporal Aftershock Patterns with Earthquake Simulator Results

    NASA Astrophysics Data System (ADS)

    Kroll, K.; Richards-Dinger, K. B.; Dieterich, J. H.

    2013-12-01

    Due to the complex nature of faulting in southern California, knowledge of rupture behavior near fault step-overs is of critical importance to properly quantify and mitigate seismic hazards. Estimates of earthquake probability are complicated by the uncertainty that a rupture will stop at or jump a fault step-over, which affects both the magnitude and frequency of occurrence of earthquakes. In recent years, earthquake simulators and dynamic rupture models have begun to address the effects of complex fault geometries on earthquake ground motions and rupture propagation. Early models incorporated vertical faults with highly simplified geometries. Many current studies examine the effects of varied fault geometry, fault step-overs, and fault bends on rupture patterns; however, these works are limited by the small numbers of integrated fault segments and simplified orientations. The previous work of Kroll et al., 2013 on the northern extent of the 2010 El Mayor-Cucapah rupture in the Yuha Desert region uses precise aftershock relocations to show an area of complex conjugate faulting within the step-over region between the Elsinore and Laguna Salada faults. Here, we employ an innovative approach of incorporating this fine-scale fault structure defined through seismological, geologic and geodetic means in the physics-based earthquake simulator, RSQSim, to explore the effects of fine-scale structures on stress transfer and rupture propagation and examine the mechanisms that control aftershock activity and local triggering of other large events. We run simulations with primary fault structures in state of California and northern Baja California and incorporate complex secondary faults in the Yuha Desert region. These models produce aftershock activity that enables comparison between the observed and predicted distribution and allow for examination of the mechanisms that control them. We investigate how the spatial and temporal distribution of aftershocks are affected by

  16. B cell Variable genes have evolved their codon usage to focus the targeted patterns of somatic mutation on the complementarity determining regions

    PubMed Central

    Saini, Jasmine; Hershberg, Uri

    2015-01-01

    The exceptional ability of B cells to diversify through somatic mutation and improve affinity of the repertoire towards the antigens is the cornerstone of adaptive immunity. Somatic mutation is not evenly distributed and exhibits certain micro-sequence specificities. We show here that the combination of somatic mutation targeting and the codon usage in human B cell receptor (BCR) Variable (V) genes create expected patterns of mutation and post mutation changes that are focused on their complementarity determining regions (CDR). T cell V genes are also skewed in targeting mutations but to a lesser extent and are lacking the codon usage bias observed in BCRs. This suggests that the observed skew in T cell receptors is due to their amino acid usage, which is similar to that of BCRs. The mutation targeting and the codon bias allow B cell CDRs to diversify by specifically accumulating nonconservative changes. We counted the distribution of mutations to CDR in 4 different human datasets. In all four cases we found that the number of actual mutations in the CDR correlated significantly with the V gene mutation biases to the CDR predicted by our models. Finally, it appears that the mutation bias in V genes indeed relates to their long-term survival in actual human repertoires. We observed that resting repertoires of B cells overexpressed V genes that were especially biased towards focused mutation and change in the CDR. This bias in V gene usage was somewhat relaxed at the height of the immune response to a vaccine, presumably because of the need for a wider diversity in a primary response. However, older patients did not retain this flexibility and were biased towards using only highly skewed V genes at all stages of their response. PMID:25660968

  17. B cell variable genes have evolved their codon usage to focus the targeted patterns of somatic mutation on the complementarity determining regions.

    PubMed

    Saini, Jasmine; Hershberg, Uri

    2015-05-01

    The exceptional ability of B cells to diversify through somatic mutation and improve affinity of the repertoire toward the antigens is the cornerstone of adaptive immunity. Somatic mutation is not evenly distributed and exhibits certain micro-sequence specificities. We show here that the combination of somatic mutation targeting and the codon usage in human B cell receptor (BCR) Variable (V) genes create expected patterns of mutation and post mutation changes that are focused on their complementarity determining regions (CDR). T cell V genes are also skewed in targeting mutations but to a lesser extent and are lacking the codon usage bias observed in BCRs. This suggests that the observed skew in T cell receptors is due to their amino acid usage, which is similar to that of BCRs. The mutation targeting and the codon bias allow B cell CDRs to diversify by specifically accumulating nonconservative changes. We counted the distribution of mutations to CDR in 4 different human datasets. In all four cases we found that the number of actual mutations in the CDR correlated significantly with the V gene mutation biases to the CDR predicted by our models. Finally, it appears that the mutation bias in V genes indeed relates to their long-term survival in actual human repertoires. We observed that resting repertoires of B cells overexpressed V genes that were especially biased toward focused mutation and change in the CDR. This bias in V gene usage was somewhat relaxed at the height of the immune response to a vaccine, presumably because of the need for a wider diversity in a primary response. However, older patients did not retain this flexibility and were biased toward using only highly skewed V genes at all stages of their response. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Crowding by a single bar: probing pattern recognition mechanisms in the visual periphery.

    PubMed

    Põder, Endel

    2014-11-06

    Whereas visual crowding does not greatly affect the detection of the presence of simple visual features, it heavily inhibits combining them into recognizable objects. Still, crowding effects have rarely been directly related to general pattern recognition mechanisms. In this study, pattern recognition mechanisms in visual periphery were probed using a single crowding feature. Observers had to identify the orientation of a rotated T presented briefly in a peripheral location. Adjacent to the target, a single bar was presented. The bar was either horizontal or vertical and located in a random direction from the target. It appears that such a crowding bar has very strong and regular effects on the identification of the target orientation. The observer's responses are determined by approximate relative positions of basic visual features; exact image-based similarity to the target is not important. A version of the "standard model" of object recognition with second-order features explains the main regularities of the data. © 2014 ARVO.

  19. Automated Discovery and Modeling of Sequential Patterns Preceding Events of Interest

    NASA Technical Reports Server (NTRS)

    Rohloff, Kurt

    2010-01-01

    The integration of emerging data manipulation technologies has enabled a paradigm shift in practitioners' abilities to understand and anticipate events of interest in complex systems. Example events of interest include outbreaks of socio-political violence in nation-states. Rather than relying on human-centric modeling efforts that are limited by the availability of SMEs, automated data processing technologies has enabled the development of innovative automated complex system modeling and predictive analysis technologies. We introduce one such emerging modeling technology - the sequential pattern methodology. We have applied the sequential pattern methodology to automatically identify patterns of observed behavior that precede outbreaks of socio-political violence such as riots, rebellions and coups in nation-states. The sequential pattern methodology is a groundbreaking approach to automated complex system model discovery because it generates easily interpretable patterns based on direct observations of sampled factor data for a deeper understanding of societal behaviors that is tolerant of observation noise and missing data. The discovered patterns are simple to interpret and mimic human's identifications of observed trends in temporal data. Discovered patterns also provide an automated forecasting ability: we discuss an example of using discovered patterns coupled with a rich data environment to forecast various types of socio-political violence in nation-states.

  20. Fatty metamorphosis and other patterns in fibrous dysplasia

    PubMed Central

    Shidham, Vinod B; Chavan, Ashwini; Rao, R Nagarjun; Komorowski, Richard A; Asma, Zeenath

    2003-01-01

    Background Interpretation of small biopsy fragments from suspected lesions of fibrous dysplasia with unusual clinical and / or radiological features may be challenging due to wide histomorphological spectrum of stromal appearances. Awareness of these variations should improve diagnostic confidence. Methods We retrospectively studied 26 cases of fibrous dysplasia (F- 19, M- 7; Ages ranged from 10 to 53 years) with confirmed diagnosis. The sites of the lesions were skull bones (9), humerus (1), femur (8), tibia (2), fibula (3), talus (1), mandible (1), and maxilla (1). Results Different stromal patterns, variably admixed with the classical pattern, were observed in 58%(15/26) of the cases. 20%(3/15) of these had more than one pattern. Focal fatty metamorphosis as groups of fat cells in the central portion of the lesion in the stroma of fibrous dysplasia between osseous trabeculae was observed in 23%(6/26) cases. Other patterns included myxoid stroma in 16%(4/26), collagenization of stroma in 12%(3/26), stroma rich pattern (with paucity of trabeculae) in 12%(3/26), foci of few foam cells in 23% (6/26), and calcified spherules in 12%(3/26). Focal osteoblastic rimming of trabeculae was observed only in 4%(1/26). Conclusions Various stromal variations and previously unreported fatty metamorphosis were frequently observed in fibrous dysplasia. PMID:12946277

  1. NMR determination of the global structure of the 113Cd derivative of desulforedoxin: investigation of the hydrogen bonding pattern at the metal center.

    PubMed Central

    Goodfellow, B. J.; Rusnak, F.; Moura, I.; Domke, T.; Moura, J. J.

    1998-01-01

    Desulforedoxin (Dx) is a simple homodimeric protein isolated from Desulfovibrio gigas (Dg) containing a distorted rubredoxin-like center with one iron coordinated by four cysteinyl residues (7.9 kDa with 36 amino acids per monomer). In order to probe the geometry and the H-bonding at the active site of Dx, the protein was reconstituted with 113Cd and the solution structure determined using 2D NMR methods. The structure of this derivative was initially compared with the NMR solution structure of the Zn form (Goodfellow BJ et al., 1996, J Biol Inorg Chem 1:341-353). Backbone amide protons for G4, D5, G13, L11 NH, and the Q14 NH side-chain protons, H-bonded in the X-ray structure, were readily exchanged with solvent. Chemical shift differences observed for amide protons near the metal center confirm the H-bonding pattern seen in the X-ray model (Archer M et al., 1995, J Mol Biol 251:690-702) and also suggest that H-bond lengths may vary between the Fe, Zn, and 113Cd forms. The H-bonding pattern was further probed using a heteronuclear spin echo difference (HSED) experiment; the results confirm the presence of NH-S H-bonds inferred from D2O exchange data and observed in the NMR family of structures. The presence of "H-bond mediated" coupling in Dx indicates that the NH-S H-bonds at the metal center have significant covalent character. The HSED experiment also identified an intermonomer "through space" coupling for one of the L26 methyl groups, indicating its proximity to the 113Cd center in the opposing monomer. This is the first example of an intermonomer "through space" coupling. Initial structure calculations produced subsets of NMR families with the S of C28 pointing away from or toward the L26 methyl: only the subset with the C28 sulfur pointing toward the L26 methyl could result in a "through space" coupling. The HSED result was therefore included in the structure calculations. Comparison of the Fe, Zn, and 113Cd forms of Dx suggests that the geometry of the

  2. NMR determination of the global structure of the 113Cd derivative of desulforedoxin: investigation of the hydrogen bonding pattern at the metal center.

    PubMed

    Goodfellow, B J; Rusnak, F; Moura, I; Domke, T; Moura, J J

    1998-04-01

    Desulforedoxin (Dx) is a simple homodimeric protein isolated from Desulfovibrio gigas (Dg) containing a distorted rubredoxin-like center with one iron coordinated by four cysteinyl residues (7.9 kDa with 36 amino acids per monomer). In order to probe the geometry and the H-bonding at the active site of Dx, the protein was reconstituted with 113Cd and the solution structure determined using 2D NMR methods. The structure of this derivative was initially compared with the NMR solution structure of the Zn form (Goodfellow BJ et al., 1996, J Biol Inorg Chem 1:341-353). Backbone amide protons for G4, D5, G13, L11 NH, and the Q14 NH side-chain protons, H-bonded in the X-ray structure, were readily exchanged with solvent. Chemical shift differences observed for amide protons near the metal center confirm the H-bonding pattern seen in the X-ray model (Archer M et al., 1995, J Mol Biol 251:690-702) and also suggest that H-bond lengths may vary between the Fe, Zn, and 113Cd forms. The H-bonding pattern was further probed using a heteronuclear spin echo difference (HSED) experiment; the results confirm the presence of NH-S H-bonds inferred from D2O exchange data and observed in the NMR family of structures. The presence of "H-bond mediated" coupling in Dx indicates that the NH-S H-bonds at the metal center have significant covalent character. The HSED experiment also identified an intermonomer "through space" coupling for one of the L26 methyl groups, indicating its proximity to the 113Cd center in the opposing monomer. This is the first example of an intermonomer "through space" coupling. Initial structure calculations produced subsets of NMR families with the S of C28 pointing away from or toward the L26 methyl: only the subset with the C28 sulfur pointing toward the L26 methyl could result in a "through space" coupling. The HSED result was therefore included in the structure calculations. Comparison of the Fe, Zn, and 113Cd forms of Dx suggests that the geometry of the

  3. An assessment of schoolyard features and behavior patterns in children's utilization and physical activity.

    PubMed

    Anthamatten, Peter; Brink, Lois; Kingston, Beverly; Kutchman, Eve; Lampe, Sarah; Nigg, Claudio

    2014-03-01

    Careful research that elucidates how behavior relates to design in the context of elementary school grounds can serve to guide cost-efficient design with the goal of encouraging physical activity (PA). This work explores patterns in children's PA behavior within playground spaces with the specific goal of guiding healthy playground design. Data on children's utilization and PA behavior in 6 playgrounds divided into 106 observation zones were collected in 2005 and 2006 at Denver elementary school playgrounds using the System for Observing Play and Leisure Activity in Youth. Analyses of variance and t tests determined whether there were differences in utilization and behavior patterns across observations zones and between genders. This study provides evidence that children prefer to use certain types of playground zones and that they are more likely to practice moderate-to-vigorous physical activity (MVPA) in some zones. The authors observed statistically significant differences between genders. Boys were more likely to engage in MVPA in zones without equipment, girls were more likely to use zones with equipment. This work suggests that the inclusion or omission of specific playground features may have an impact on the way that children use the spaces.

  4. Fundus autofluorescence imaging patterns in central serous chorioretinopathy according to chronicity.

    PubMed

    Lee, W J; Lee, J-H; Lee, B R

    2016-10-01

    PurposeTo investigate the time-period characteristics associated with morphologic changes in central serous chorioretinopathy (CSC) using fundus autofluorescence (FAF).Patients and methodsRetrospective, cross-sectional observational case series. Patients were classified into three groups: acute and chronic according to the onset of subjective symptoms of 6 weeks and sequelae patients who have history and symptoms but no serous retinal detachment (SRD). We compared FAF images to obtain characteristic findings according to the chronicity.ResultsA total of 52 eyes were included in this study. Acute CSC eyes were characterized by decreased FAF intensity at the leakage point in 13/22 eyes (56.5%) and staining patterns with various levels of fluorescence signal (hyperautofluorescent (10 eyes, 43.5%), hypoautofluorescent (1 eye, 4.3%), and minimal changes (12 eyes, 52.2%)) in the area of SRD. In chronic CSC eyes, hyperautofluorescent (14 eyes, 63.6%) or minimal changes (8 eyes, 36.4%) were observed in the area of SRD. Discrete dots with increased FAF intensity were observed in chronic CSC eyes (P<0.001). Eyes with sequelae of CSC had mixed FAF patterns over areas of retinal pigment epithelium (RPE) atrophy in seven eyes (100%, P<0.001)) and descending tracts which showed various FAF intensities according to the RPE and photoreceptor status (P<0.001).ConclusionFAF imaging patterns in CSC eyes differ according to the course of the disease, reflecting RPE and outer retinal changes. Detailed investigation using FAF could help to estimate the duration of CSC and determine the proper treatment modality.

  5. Dietary patterns and socioeconomic position.

    PubMed

    Mullie, P; Clarys, P; Hulens, M; Vansant, G

    2010-03-01

    To test a socioeconomic hypothesis on three dietary patterns and to describe the relation between three commonly used methods to determine dietary patterns, namely Healthy Eating Index, Mediterranean Diet Score and principal component analysis. Cross-sectional design in 1852 military men. Using mailed questionnaires, the food consumption frequency was recorded. The correlation coefficients between the three dietary patterns varied between 0.43 and 0.62. The highest correlation was found between Healthy Eating Index and Healthy Dietary Pattern (principal components analysis). Cohen's kappa coefficient of agreement varied between 0.10 and 0.20. After age-adjustment, education and income remained associated with the most healthy dietary pattern. Even when both socioeconomic indicators were used together in one model, higher income and education were associated with higher scores for Healthy Eating Index, Mediterranean Diet Score and Healthy Dietary Pattern. The least healthy quintiles of dietary pattern as measured by the three methods were associated with a clustering of unhealthy behaviors, that is, smoking, low physical activity, highest intake of total fat and saturated fatty acids, and low intakes of fruits and vegetables. The three dietary patterns used indicated that the most healthy patterns were associated with a higher socioeconomic position, while lower patterns were associated with several unhealthy behaviors.

  6. No evidence that skewing of X chromosome inactivation patterns is transmitted to offspring in humans

    PubMed Central

    Bolduc, Véronique; Chagnon, Pierre; Provost, Sylvie; Dubé, Marie-Pierre; Belisle, Claude; Gingras, Marianne; Mollica, Luigina; Busque, Lambert

    2007-01-01

    Skewing of X chromosome inactivation (XCI) can occur in normal females and increases in tissues with age. The mechanisms underlying skewing in normal females, however, remain controversial. To better understand the phenomenon of XCI in nondisease states, we evaluated XCI patterns in epithelial and hematopoietic cells of over 500 healthy female mother-neonate pairs. The incidence of skewing observed in mothers was twice that observed in neonates, and in both cohorts, the incidence of XCI was lower in epithelial cells than hematopoietic cells. These results suggest that XCI incidence varies by tissue type and that age-dependent mechanisms can influence skewing in both epithelial and hematopoietic cells. In both cohorts, a correlation was identified in the direction of skewing in epithelial and hematopoietic cells, suggesting common underlying skewing mechanisms across tissues. However, there was no correlation between the XCI patterns of mothers and their respective neonates, and skewed mothers gave birth to skewed neonates at the same frequency as nonskewed mothers. Taken together, our data suggest that in humans, the XCI pattern observed at birth does not reflect a single heritable genetic locus, but rather corresponds to a complex trait determined, at least in part, by selection biases occurring after XCI. PMID:18097474

  7. Center determination for trailed sources in astronomical observation images

    NASA Astrophysics Data System (ADS)

    Du, Jun Ju; Hu, Shao Ming; Chen, Xu; Guo, Di Fu

    2014-11-01

    Images with trailed sources can be obtained when observing near-Earth objects, such as small astroids, space debris, major planets and their satellites, no matter the telescopes track on sidereal speed or the speed of target. The low centering accuracy of these trailed sources is one of the most important sources of the astrometric uncertainty, but how to determine the central positions of the trailed sources accurately remains a significant challenge to image processing techniques, especially in the study of faint or fast moving objects. According to the conditions of one-meter telescope at Weihai Observatory of Shandong University, moment and point-spread-function (PSF) fitting were chosen to develop the image processing pipeline for space debris. The principles and the implementations of both two methods are introduced in this paper. And some simulated images containing trailed sources are analyzed with each technique. The results show that two methods are comparable to obtain the accurate central positions of trailed sources when the signal to noise (SNR) is high. But moment tends to fail for the objects with low SNR. Compared with moment, PSF fitting seems to be more robust and versatile. However, PSF fitting is quite time-consuming. Therefore, if there are enough bright stars in the field, or the high astronometric accuracy is not necessary, moment is competent. Otherwise, the combination of moment and PSF fitting is recommended.

  8. A Western dietary pattern is associated with higher blood pressure in Iranian adolescents.

    PubMed

    Hojhabrimanesh, Abdollah; Akhlaghi, Masoumeh; Rahmani, Elham; Amanat, Sasan; Atefi, Masoumeh; Najafi, Maryam; Hashemzadeh, Maral; Salehi, Saedeh; Faghih, Shiva

    2017-02-01

    The dietary determinants of adolescent blood pressure (BP) are not well understood. We determined the association between major dietary patterns and BP in a sample of Iranian adolescents. This cross-sectional study was conducted among a representative sample (n = 557) of Shirazi adolescents aged 12-19 years. Participants' systolic and diastolic BP was measured using a validated oscillometric BP monitor. Usual dietary intakes during the past 12 months were assessed using a valid and reproducible 168-item semiquantitative food frequency questionnaire through face-to-face interviews. Principal component factor analysis was used to identify major dietary patterns based on a set of 25 predefined food groups. Overall, three major dietary patterns were identified, among which only the Western pattern (abundant in soft drinks, sweets and desserts, salt, mayonnaise, tea and coffee, salty snacks, high-fat dairy products, French fries, and red or processed meats) had a significant association with BP. After adjusting for potential confounders in the analysis of covariance models, multivariable adjusted means of the systolic and mean BP of subjects in the highest tertile of the Western pattern score were significantly higher than those in the lowest tertile (for systolic BP: mean difference 6.9 mmHg, P = 0.001; and for mean BP: mean difference 4.2 mmHg, P = 0.003). A similar but statistically insignificant difference was observed in terms of diastolic BP. The findings suggest that a Western dietary pattern is associated with higher BP in Iranian adolescents. However, additional large-scale prospective studies with adequate methodological quality are required to confirm these findings.

  9. The activation pattern of macrophages in giant cell (temporal) arteritis and primary angiitis of the central nervous system.

    PubMed

    Mihm, Bernhard; Bergmann, Markus; Brück, Wolfgang; Probst-Cousin, Stefan

    2014-06-01

    To determine if the pattern of macrophage activation reflects differences in the pathogenesis and clinical presentation of giant cell arteritis and primary angiitis of the central nervous system, specimens of 10 patients with giant cell arteritis and five with primary angiitis of the central nervous system were immunohistochemically studied and the expression of the macrophage activation markers 27E10, MRP14, MRP8 and 25F9 was determined in the vasculitic infiltrates. Thus, a partly different expression pattern of macrophage activation markers in giant cell arteritis and primary angiitis of the central nervous system was observed. The group comparison revealed that giant cell arteritis cases had significantly higher numbers of acute activated MRP14-positive macrophages, whereas primary angiitis of the central nervous system is characterized by a tendency toward more MRP8-positive intermediate/late activated macrophages. Furthermore, in giant cell arteritis comparably fewer CD8-positive lymphocytes were observed. These observations suggest, that despite their histopathological similarities, giant cell arteritis and primary angiitis of the central nervous system appear to represent either distinct entities within the spectrum of granulomatous vasculitides or different stages of similar disease processes. Their discrete clinical presentation is reflected by different activation patterns of macrophages, which may characterize giant cell arteritis as a more acute process and primary angiitis of the central nervous system as a more advanced inflammatory process. © 2013 Japanese Society of Neuropathology.

  10. Foot-strike pattern and performance in a marathon.

    PubMed

    Kasmer, Mark E; Liu, Xue-Cheng; Roberts, Kyle G; Valadao, Jason M

    2013-05-01

    To determine prevalence of heel strike in a midsize city marathon, if there is an association between foot-strike classification and race performance, and if there is an association between foot-strike classification and gender. Foot-strike classification (forefoot, midfoot, heel, or split strike), gender, and rank (position in race) were recorded at the 8.1-km mark for 2112 runners at the 2011 Milwaukee Lakefront Marathon. 1991 runners were classified by foot-strike pattern, revealing a heel-strike prevalence of 93.67% (n = 1865). A significant difference between foot-strike classification and performance was found using a Kruskal-Wallis test (P < .0001), with more elite performers being less likely to heel strike. No significant difference between foot-strike classification and gender was found using a Fisher exact test. In addition, subgroup analysis of the 126 non-heel strikers found no significant difference between shoe wear and performance using a Kruskal-Wallis test. The high prevalence of heel striking observed in this study reflects the foot-strike pattern of most mid-distance to long-distance runners and, more important, may predict their injury profile based on the biomechanics of a heel-strike running pattern. This knowledge can help clinicians appropriately diagnose, manage, and train modifications of injured runners.

  11. Determination of polychlorinated biphenyl levels in the serum of residents and in the homogenates of seafood from the New Bedford, Massachusetts Area: A comparison of exposure sources through pattern recognition techniques

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Burse, V.W.; Groce, D.F.; Caudill, S.P.

    1994-01-01

    Gas chromatographic patterns of polychlorinated biophenyls (PCBs) found in the serum of New Bedford, MA residents with high serum PCBs were compared to patterns found in lobsters and bluefish taken from local waters, and goats fed selected technical Aroclors (e.g., Aroclors 1016, 1242, 1254, or 1260) using Jaccard measures of similarity and Principal Component Analysis. Pattern in humans were silimar to patterns in lobsters and both were more similar to those in the goat fed Aroclor 1254 as demonstrated by both pattern recognition techniques. However, patterns observed in humans, lobsters and bluefish all exhibited some presence of PCBs more characteristicmore » of Aroclors 1016 and/or 1242 or 1260.« less

  12. Satellite observations for describing fire patterns and climate-related fire drivers in the Brazilian savannas

    NASA Astrophysics Data System (ADS)

    Verola Mataveli, Guilherme Augusto; Siqueira Silva, Maria Elisa; Pereira, Gabriel; da Silva Cardozo, Francielle; Shinji Kawakubo, Fernando; Bertani, Gabriel; Cezar Costa, Julio; de Cássia Ramos, Raquel; Valéria da Silva, Viviane

    2018-01-01

    In the Brazilian savannas (Cerrado biome) fires are natural and a tool for shifting land use; therefore, temporal and spatial patterns result from the interaction of climate, vegetation condition and human activities. Moreover, orbital sensors are the most effective approach to establish patterns in the biome. We aimed to characterize fire, precipitation and vegetation condition regimes and to establish spatial patterns of fire occurrence and their correlation with precipitation and vegetation condition in the Cerrado. The Cerrado was first and second biome for the occurrence of burned areas (BA) and hotspots, respectively. Occurrences are higher during the dry season and in the savanna land use. Hotspots and BA tend to decrease, and concentrate in the north, but more intense hotspots are not necessarily located where concentration is higher. Spatial analysis showed that averaged and summed values can hide patterns, such as for precipitation, which has the lowest average in August, but minimum precipitation in August was found in 7 % of the Cerrado. Usually, there is a 2-3-month lag between minimum precipitation and maximum hotspots and BA, while minimum VCI and maximum hotspots and BA occur in the same month. Hotspots and BA are better correlated with VCI than precipitation, qualifying VCI as an indicator of the susceptibility of vegetation to ignition.

  13. Erosion patterns on dissolving blocks

    NASA Astrophysics Data System (ADS)

    Courrech du Pont, Sylvain; Cohen, Caroline; Derr, Julien; Berhanu, Michael

    2016-04-01

    Patterns in nature are shaped under water flows and wind action, and the understanding of their morphodynamics goes through the identification of the physical mechanisms at play. When a dissoluble body is exposed to a water flow, typical patterns with scallop-like shapes may appear [1,2]. These shapes are observed on the walls of underground rivers or icebergs. We experimentally study the erosion of dissolving bodies made of salt, caramel or ice into water solutions without external flow. The dissolving mixture, which is created at the solid/liquid interface, undergoes a buoyancy-driven instability comparable to a Rayleigh-Bénard instability so that the dissolving front destabilizes into filaments. This mechanism yields to spatial variations of solute concentration and to differential dissolution of the dissolving block. We first observe longitudinal stripes with a well defined wavelength, which evolve towards chevrons and scallops that interact and move again the dissolving current. Thanks to a careful analysis of the competing physical mechanisms, we propose scaling laws, which account for the characteristic lengths and times of the early regime in experiments. The long-term evolution of patterns is understood qualitatively. A close related mechanism has been proposed to explain structures observed on the basal boundary of ice cover on brakish lakes [3] and we suggest that our experiments are analogous and explain the scallop-like patterns on iceberg walls. [1] P. Meakin and B. Jamtveit, Geological pattern formation by growth and dissolution in aqueous systems, Proc. R. Soc. A 466, 659-694 (2010). [2] P.N. Blumberg and R.L. Curl, Experimental and theoretical studies of dissolution roughness, J. Fluid Mech. 65, 735-751 (1974). [3] L. Solari and G. Parker, Morphodynamic modelling of the basal boundary of ice cover on brakish lakes, J.G.R. 118, 1432-1442 (2013).

  14. Spatial and temporal statistical analysis of bycatch data: Patterns of sea turtle bycatch in the North Atlantic

    USGS Publications Warehouse

    Gardner, B.; Sullivan, P.J.; Morreale, S.J.; Epperly, S.P.

    2008-01-01

    Loggerhead (Caretta caretta) and leatherback (Dermochelys coriacea) sea turtle distributions and movements in offshore waters of the western North Atlantic are not well understood despite continued efforts to monitor, survey, and observe them. Loggerhead and leatherback sea turtles are listed as endangered by the World Conservation Union, and thus anthropogenic mortality of these species, including fishing, is of elevated interest. This study quantifies spatial and temporal patterns of sea turtle bycatch distributions to identify potential processes influencing their locations. A Ripley's K function analysis was employed on the NOAA Fisheries Atlantic Pelagic Longline Observer Program data to determine spatial, temporal, and spatio-temporal patterns of sea turtle bycatch distributions within the pattern of the pelagic fishery distribution. Results indicate that loggerhead and leatherback sea turtle catch distributions change seasonally, with patterns of spatial clustering appearing from July through October. The results from the space-time analysis indicate that sea turtle catch distributions are related on a relatively fine scale (30-200 km and 1-5 days). The use of spatial and temporal point pattern analysis, particularly K function analysis, is a novel way to examine bycatch data and can be used to inform fishing practices such that fishing could still occur while minimizing sea turtle bycatch. ?? 2008 NRC.

  15. Solution NMR studies provide structural basis for endotoxin pattern recognition by the innate immune receptor CD14

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Albright, Seth; Chen Bin; Holbrook, Kristen

    CD14 functions as a key pattern recognition receptor for a diverse array of Gram-negative and Gram-positive cell-wall components in the host innate immune response by binding to pathogen-associated molecular patterns (PAMPs) at partially overlapping binding site(s). To determine the potential contribution of CD14 residues in this pattern recognition, we have examined using solution NMR spectroscopy, the binding of three different endotoxin ligands, lipopolysaccharide, lipoteichoic acid, and a PGN-derived compound, muramyl dipeptide to a {sup 15}N isotopically labeled 152-residue N-terminal fragment of sCD14 expressed in Pichia pastoris. Mapping of NMR spectral changes upon addition of ligands revealed that the pattern ofmore » residues affected by binding of each ligand is partially similar and partially different. This first direct structural observation of the ability of specific residue combinations of CD14 to differentially affect endotoxin binding may help explain the broad specificity of CD14 in ligand recognition and provide a structural basis for pattern recognition. Another interesting finding from the observed spectral changes is that the mode of binding may be dynamically modulated and could provide a mechanism for binding endotoxins with structural diversity through a common binding site.« less

  16. Evaluation of stereo-array isotope labeling (SAIL) patterns for automated structural analysis of proteins with CYANA.

    PubMed

    Ikeya, Teppei; Terauchi, Tsutomu; Güntert, Peter; Kainosho, Masatsune

    2006-07-01

    Recently we have developed the stereo-array isotope labeling (SAIL) technique to overcome the conventional molecular size limitation in NMR protein structure determination by employing complete stereo- and regiospecific patterns of stable isotopes. SAIL sharpens signals and simplifies spectra without the loss of requisite structural information, thus making large classes of proteins newly accessible to detailed solution structure determination. The automated structure calculation program CYANA can efficiently analyze SAIL-NOESY spectra and calculate structures without manual analysis. Nevertheless, the original SAIL method might not be capable of determining the structures of proteins larger than 50 kDa or membrane proteins, for which the spectra are characterized by many broadened and overlapped peaks. Here we have carried out simulations of new SAIL patterns optimized for minimal relaxation and overlap, to evaluate the combined use of SAIL and CYANA for solving the structures of larger proteins and membrane proteins. The modified approach reduces the number of peaks to nearly half of that observed with uniform labeling, while still yielding well-defined structures and is expected to enable NMR structure determinations of these challenging systems.

  17. Probing Twisted Magnetic Field Using Microwave Observations in an M Class Solar Flare on 11 February, 2014

    NASA Astrophysics Data System (ADS)

    Sharykin, I. N.; Kuznetsov, A. A.; Myshyakov, I. I.

    2018-02-01

    This work demonstrates the possibility of magnetic-field topology investigations using microwave polarimetric observations. We study a solar flare of GOES M1.7 class that occurred on 11 February, 2014. This flare revealed a clear signature of spatial inversion of the radio-emission polarization sign. We show that the observed polarization pattern can be explained by nonthermal gyrosynchrotron emission from the twisted magnetic structure. Using observations of the Reuven Ramaty High Energy Solar Spectroscopic Imager, Nobeyama Radio Observatory, Radio Solar Telescope Network, and Solar Dynamics Observatory, we have determined the parameters of nonthermal electrons and thermal plasma and identified the magnetic structure where the flare energy release occurred. To reconstruct the coronal magnetic field, we use nonlinear force-free field (NLFFF) and potential magnetic-field approaches. Radio emission of nonthermal electrons is simulated by the GX Simulator code using the extrapolated magnetic field and the parameters of nonthermal electrons and thermal plasma inferred from the observations; the model radio maps and spectra are compared with observations. We have found that the potential-magnetic-field approach fails to explain the observed circular polarization pattern; on the other hand, the Stokes-V map is successfully explained by assuming nonthermal electrons to be distributed along the twisted magnetic structure determined by the NLFFF extrapolation approach. Thus, we show that the radio-polarization maps can be used for diagnosing the topology of the flare magnetic structures where nonthermal electrons are injected.

  18. Determining thin film properties by fitting optical transmittance

    NASA Astrophysics Data System (ADS)

    Klein, J. D.; Yen, A.; Cogan, S. F.

    1990-08-01

    The optical transmission spectra of rf sputtered tungsten oxide films on glass substrates were modeled to determine absorption edge behavior, film thickness, and index of refraction. Removal of substrate reflection and absorption phenomena from the experimental spectra allowed direct examination of thin film optical characteristics. The interference fringe pattern allows determination of the film thickness and the dependence of the real index of refraction on wavelength. Knowledge of the interference fringe behavior in the vicinity of the absorption edge was found essential to unambiguous determination of the optical band gap. In particular, the apparently random deviations commonly observed in the extrapolation of as-acquired data are eliminated by explicitly considering interference fringe phenomena. The multivariable optimization fitting scheme employed allows air-film-substrate reflection losses to be compensated without making reflectance measurements.

  19. Determinants of observed confidant support for divorced mothers.

    PubMed

    DeGarmo, D S; Forgatch, M S

    1997-02-01

    Marital separation can be a time of extreme stress and can significantly disrupt support networks and support processes when they are needed most. The purpose of this investigation was to test mechanisms of support erosion in a multimethod study of 138 divorced mothers and their confidants. Previous work was extended by using observational measures of confidant support in a process model including (a) maternal characteristics over time, (b) support person characteristics, and (c) relationship characteristics (intimacy and confidant relationship type). A hypothesized mechanism of erosion was supported in which ongoing maternal distress was positively associated with levels of confidant negativity, which in turn was related to lower levels of observed support. Having a partner was related to more intimacy than was having family and friends. Contrary to expectation, however, having a partner was related to lower levels of support, and intimacy was not related to observed support.

  20. Interference in astronomical speckle patterns

    NASA Technical Reports Server (NTRS)

    Breckinridge, J. B.

    1976-01-01

    Astronomical speckle patterns are examined in an atmospheric-optics context in order to determine what kind of image quality is to be expected from several different imaging techniques. The model used to describe the instantaneous complex field distribution across the pupil of a large telescope regards the pupil as a deep phase grating with a periodicity given by the size of the cell of uniform phase or the refractive index structure function. This model is used along with an empirical formula derived purely from the physical appearance of the speckle patterns to discuss the orders of interference in astronomical speckle patterns.