Sample records for obtain detailed maps

  1. An attempt to obtain a detailed declination chart from the United States magnetic anomaly map

    USGS Publications Warehouse

    Alldredge, L.R.

    1989-01-01

    Modern declination charts of the United States show almost no details. It was hoped that declination details could be derived from the information contained in the existing magnetic anomaly map of the United States. This could be realized only if all of the survey data were corrected to a common epoch, at which time a main-field vector model was known, before the anomaly values were computed. Because this was not done, accurate declination values cannot be determined. In spite of this conclusion, declination values were computed using a common main-field model for the entire United States to see how well they compared with observed values. The computed detailed declination values were found to compare less favourably with observed values of declination than declination values computed from the IGRF 1985 model itself. -from Author

  2. Automated map sharpening by maximization of detail and connectivity

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Terwilliger, Thomas C.; Sobolev, Oleg V.; Afonine, Pavel V.

    An algorithm for automatic map sharpening is presented that is based on optimization of the detail and connectivity of the sharpened map. The detail in the map is reflected in the surface area of an iso-contour surface that contains a fixed fraction of the volume of the map, where a map with high level of detail has a high surface area. The connectivity of the sharpened map is reflected in the number of connected regions defined by the same iso-contour surfaces, where a map with high connectivity has a small number of connected regions. By combining these two measures inmore » a metric termed the `adjusted surface area', map quality can be evaluated in an automated fashion. This metric was used to choose optimal map-sharpening parameters without reference to a model or other interpretations of the map. Map sharpening by optimization of the adjusted surface area can be carried out for a map as a whole or it can be carried out locally, yielding a locally sharpened map. To evaluate the performance of various approaches, a simple metric based on map–model correlation that can reproduce visual choices of optimally sharpened maps was used. The map–model correlation is calculated using a model withBfactors (atomic displacement factors; ADPs) set to zero. Finally, this model-based metric was used to evaluate map sharpening and to evaluate map-sharpening approaches, and it was found that optimization of the adjusted surface area can be an effective tool for map sharpening.« less

  3. Automated map sharpening by maximization of detail and connectivity

    DOE PAGES

    Terwilliger, Thomas C.; Sobolev, Oleg V.; Afonine, Pavel V.; ...

    2018-05-18

    An algorithm for automatic map sharpening is presented that is based on optimization of the detail and connectivity of the sharpened map. The detail in the map is reflected in the surface area of an iso-contour surface that contains a fixed fraction of the volume of the map, where a map with high level of detail has a high surface area. The connectivity of the sharpened map is reflected in the number of connected regions defined by the same iso-contour surfaces, where a map with high connectivity has a small number of connected regions. By combining these two measures inmore » a metric termed the `adjusted surface area', map quality can be evaluated in an automated fashion. This metric was used to choose optimal map-sharpening parameters without reference to a model or other interpretations of the map. Map sharpening by optimization of the adjusted surface area can be carried out for a map as a whole or it can be carried out locally, yielding a locally sharpened map. To evaluate the performance of various approaches, a simple metric based on map–model correlation that can reproduce visual choices of optimally sharpened maps was used. The map–model correlation is calculated using a model withBfactors (atomic displacement factors; ADPs) set to zero. Finally, this model-based metric was used to evaluate map sharpening and to evaluate map-sharpening approaches, and it was found that optimization of the adjusted surface area can be an effective tool for map sharpening.« less

  4. A Detailed Geomorphological Sketch Map of Titan's Afekan Crater Region

    NASA Astrophysics Data System (ADS)

    Schoenfeld, A.; Malaska, M. J.; Lopes, R. M. C.; Le Gall, A. A.; Birch, S. P.; Hayes, A.

    2014-12-01

    Due to Titan's uniquely thick atmosphere and organic haze layers, the most detailed images (with resolution of 300 meters per pixel) of the Saturnian moon's surface exist as Synthetic Aperture Radar (SAR) images taken by Cassini's RADAR instrument. Using the SAR data, we have been putting together detailed geomorphological sketch maps of various Titan regions in an effort to piece together its geologic history. We initially examined the Afekan region of Titan due to extensive SAR coverage. Features described on Afekan fall under the categories (in order of geologic age, extrapolated from their relative emplacement) of hummocky, labyrinthic, plains, and dunes. During our mapping effort, we also divided each terrain category into several different subclasses on a local level. Our map offers a chance to present and analyze the distribution, relationship, and potential formation hypotheses of the different terrains. In bulk, we find evidence for both Aeolian and fluvial processes. A particularly important unit found in the Afekan region is the unit designated "undifferentiated plains", or the "Blandlands" of Titan, a mid-latitude terrain unit comprising 25% of the moon's surface. Undifferentiated plains are notable for its relative featurelessness in radar and infrared. Our interpretation is that it is a fill unit in and around Afekan crater and other hummocky/mountainous units. The plains suggest that the nature of Titan's geomorphology seems to be tied to ongoing erosional forces and sediment deposition. Other datasets used in characterizing Titan's various geomorphological units include information obtained from radiometry, infrared (ISS), and spectrometry (VIMS). We will present the detailed geomorphological sketch map with all the terrain units assigned and labeled.

  5. Processing and analysis of cardiac optical mapping data obtained with potentiometric dyes

    PubMed Central

    Laughner, Jacob I.; Ng, Fu Siong; Sulkin, Matthew S.; Arthur, R. Martin

    2012-01-01

    Optical mapping has become an increasingly important tool to study cardiac electrophysiology in the past 20 years. Multiple methods are used to process and analyze cardiac optical mapping data, and no consensus currently exists regarding the optimum methods. The specific methods chosen to process optical mapping data are important because inappropriate data processing can affect the content of the data and thus alter the conclusions of the studies. Details of the different steps in processing optical imaging data, including image segmentation, spatial filtering, temporal filtering, and baseline drift removal, are provided in this review. We also provide descriptions of the common analyses performed on data obtained from cardiac optical imaging, including activation mapping, action potential duration mapping, repolarization mapping, conduction velocity measurements, and optical action potential upstroke analysis. Optical mapping is often used to study complex arrhythmias, and we also discuss dominant frequency analysis and phase mapping techniques used for the analysis of cardiac fibrillation. PMID:22821993

  6. Detailed Mapping of the Alu Volcano, Ethiopia

    NASA Astrophysics Data System (ADS)

    Agrain, Guillaume; Buso, Roxane; Carlier, Jean; van Wyk de Vries, Benjamin

    2017-04-01

    The Alu volcano in the Danakil Depression is interpreted as a forced-fold related uplift, related to progressive intrusions of sills, or similar tabular intrusions. Alu is in a very isolated and difficult to access area, but Google Earth provides high resolution images that can be used for mapping the structure and volcanic features. We use the imagery to map in as much detail as possible all the morphological features of Alu, which we separate into primary volcanic features and secondary structural features. The mapping has been undertaken by a group undergraduates, graduates and researchers. The group has checked and validated the interpretation of each feature mapped. The data set is available as a kmz, and has been imported into QGIS. The detailed mapping reveals a complex history of multiple lava fields and fissure eruptions, some which pre-date uplift, while others have occurred during uplift, but are subsequently deformed. Similarly, there are cross-cutting structures, and we are able to set up a chronology of events. This shows that uplift grew in an area which was already covered by lavas, that some lava has been probably erupted from Alu's flanks, while most eruptions have been from around the base of Alu. Early in the deformation, thrust faults developed on the lower flanks, similar to those described near the Grosmanaux uplift (van Wyk de Vries et al 2014). These are cut by the larger faults, and by minor fissures. The mapping provides an accessible way of preparing for dedicated fieldwork in preparation of an eventual field expedition to Alu, while extracting the most from remote sensing data.

  7. Quantitatively Mapping Cellular Viscosity with Detailed Organelle Information via a Designed PET Fluorescent Probe

    PubMed Central

    Liu, Tianyu; Liu, Xiaogang; Spring, David R.; Qian, Xuhong; Cui, Jingnan; Xu, Zhaochao

    2014-01-01

    Viscosity is a fundamental physical parameter that influences diffusion in biological processes. The distribution of intracellular viscosity is highly heterogeneous, and it is challenging to obtain a full map of cellular viscosity with detailed organelle information. In this work, we report 1 as the first fluorescent viscosity probe which is able to quantitatively map cellular viscosity with detailed organelle information based on the PET mechanism. This probe exhibited a significant ratiometric fluorescence intensity enhancement as solvent viscosity increases. The emission intensity increase was attributed to combined effects of the inhibition of PET due to restricted conformational access (favorable for FRET, but not for PET), and the decreased PET efficiency caused by viscosity-dependent twisted intramolecular charge transfer (TICT). A full map of subcellular viscosity was successfully constructed via fluorescent ratiometric detection and fluorescence lifetime imaging; it was found that lysosomal regions in a cell possess the highest viscosity, followed by mitochondrial regions. PMID:24957323

  8. Interactive NCORP Map Details Community Research Sites | Division of Cancer Prevention

    Cancer.gov

    An interactive map of the NCI Community Oncology Research Program (NCORP) with detailed information on hundreds of community sites that take part in clinical trials is available on the NCORP website. NCORP Map NCORP Community Sites, Minority/Underserved Community Sites, and Research Bases |

  9. A global magnetic anomaly map. [obtained from POGO satellite data

    NASA Technical Reports Server (NTRS)

    Regan, R. D.; Davis, W. M.; Cain, J. C.

    1974-01-01

    A subset of POGO satellite magnetometer data has been formed that is suitable for analysis of crustal magnetic anomalies. Using a thirteenth order field model, fit to these data, magnetic residuals have been calculated over the world to latitude limits of plus 50 deg. These residuals averaged over one degree latitude-longitude blocks represent a detailed global magnetic anomaly map derived solely from satellite data. Preliminary analysis of the map indicates that the anomalies are real and of geological origin.

  10. 10. Detail of map showing Battery Davis and Panama Gun ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. Detail of map showing Battery Davis and Panama Gun Mounts at right, by U.S. Engineering Office, San Francisco, California, August 5, 1934. - Fort Funston, Panama Mounts for 155mm Guns, Skyline Boulevard & Great Highway, San Francisco, San Francisco County, CA

  11. Influence of pansharpening techniques in obtaining accurate vegetation thematic maps

    NASA Astrophysics Data System (ADS)

    Ibarrola-Ulzurrun, Edurne; Gonzalo-Martin, Consuelo; Marcello-Ruiz, Javier

    2016-10-01

    In last decades, there have been a decline in natural resources, becoming important to develop reliable methodologies for their management. The appearance of very high resolution sensors has offered a practical and cost-effective means for a good environmental management. In this context, improvements are needed for obtaining higher quality of the information available in order to get reliable classified images. Thus, pansharpening enhances the spatial resolution of the multispectral band by incorporating information from the panchromatic image. The main goal in the study is to implement pixel and object-based classification techniques applied to the fused imagery using different pansharpening algorithms and the evaluation of thematic maps generated that serve to obtain accurate information for the conservation of natural resources. A vulnerable heterogenic ecosystem from Canary Islands (Spain) was chosen, Teide National Park, and Worldview-2 high resolution imagery was employed. The classes considered of interest were set by the National Park conservation managers. 7 pansharpening techniques (GS, FIHS, HCS, MTF based, Wavelet `à trous' and Weighted Wavelet `à trous' through Fractal Dimension Maps) were chosen in order to improve the data quality with the goal to analyze the vegetation classes. Next, different classification algorithms were applied at pixel-based and object-based approach, moreover, an accuracy assessment of the different thematic maps obtained were performed. The highest classification accuracy was obtained applying Support Vector Machine classifier at object-based approach in the Weighted Wavelet `à trous' through Fractal Dimension Maps fused image. Finally, highlight the difficulty of the classification in Teide ecosystem due to the heterogeneity and the small size of the species. Thus, it is important to obtain accurate thematic maps for further studies in the management and conservation of natural resources.

  12. 52. POWER HOUSE AREA, SANTA ANA NO. 2; DETAIL MAP ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    52. POWER HOUSE AREA, SANTA ANA NO. 2; DETAIL MAP OF SANTA ANA NO. 1 AND NO. 2 HYDROELECTRIC PROJECT, EXHIBIT K, APR. 30, 1945. SCE drawing no. 523691 (sheet no. 6; for filing with the Federal Power Commission). - Santa Ana River Hydroelectric System, Redlands, San Bernardino County, CA

  13. 9. Town of Hamden, 1868 Map detail photocopied from F. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    9. Town of Hamden, 1868 Map detail photocopied from F. W. Beers, et al., Atlas of New Haven County, Connecticut (New York, 1868), p. 25. Shows the newly created Lake Whitney and, one quarter mile south of the armory, a 'Rifle Factory.' - Eli Whitney Armory, West of Whitney Avenue, Armory Street Vicinity, Hamden, New Haven County, CT

  14. 7. Detail, 1885 Sanborn Fire Insurance Map, Carlin, Nevada, in ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    7. Detail, 1885 Sanborn Fire Insurance Map, Carlin, Nevada, in collection of Nevada Historical Society, Reno; credit Nevada Historical Society. Engine Stores Building is adjacent to R.R. Repair Shop, and is shown containing Library, Cooper Shop, Office, Ware Room, and Boiler & Engine Room. - Southern Pacific Railroad, Carlin Shops, Foot of Sixth Street, Carlin, Elko County, NV

  15. Detailed Sections from Auger Holes in the Roanoke Rapids 1:100,000 Map Sheet, North Carolina

    USGS Publications Warehouse

    Weems, Robert E.; Lewis, William C.

    2007-01-01

    Introduction The Roanoke Rapids 1:100,000 map sheet straddles the Coastal Plain / Piedmont boundary in northernmost North Carolina (Figure 1). Sediments of the Coastal Plain underlie the eastern three-fourths of this area, and patchy outliers of Coastal Plain units cap many of the higher hills in the western one-fourth of the area. Sediments dip gently to the east and reach a maximum known thickness in the extreme southeast part of the map area (Figure 2). The gentle eastward dip is disrupted in several areas due to faulting. The U.S. Geological Survey recovered one core and augered 97 research test holes within the Roanoke Rapids 1:100,000 map sheet to supplement sparse outcrop data available from the Coastal Plain portion of the map area. The recovered sediments were studied and data from them recorded to determine the lithologic characteristics, spatial distribution, and temporal framework of the represented Coastal Plain stratigraphic units. These test holes were critical for accurately determining the distribution of major geologic units and the position of unit boundaries that will be shown on the forthcoming Roanoke Rapids geologic map, but much of the detailed subsurface data cannot be shown readily through this map product. Therefore, detailed descriptions have been collected in this open-file report for geologists, hydrologists, engineers, and community planners to provide a detailed shallow-subsurface stratigraphic framework for much of the Roanoke Rapids map region.

  16. Evaluation of freely available ancillary data used for detailed soil mapping in Brazil

    NASA Astrophysics Data System (ADS)

    Samuel-Rosa, Alessandro; Anjos, Lúcia; Vasques, Gustavo; Heuvelink, Gerard

    2014-05-01

    Brazil is one of the world's largest food producers, and is home of both largest rainforest and largest supply of renewable fresh water on Earth. However, it lacks detailed soil information in extensive areas of the country. The best soil map covering the entire country was published at a scale of 1:5,000,000. Termination of governmental support for systematic soil mapping in the 1980's made detailed soil mapping of the whole country a very difficult task to accomplish. Nowadays, due to new user-driven demands (e.g. precision agriculture), most detailed soil maps are produced for small size areas. Many of them rely on as is freely available ancillary data, although their accuracy is usually not reported or unknown. Results from a validation exercise that we performed using ground control points from a small hilly catchment (20 km²) in Southern Brazil (-53.7995ºE, -29.6355ºN) indicate that most freely available ancillary data needs some type of correction before use. Georeferenced and orthorectified RapidEye imagery (recently acquired by the Brazilian government) has a horizontal accuracy (root-mean-square error, RMSE) of 37 m, which is worse than the value published in the metadata (32 m). Like any remote sensing imagery, RapidEye imagery needs to be correctly registered before its use for soil mapping. Topographic maps produced by the Brazilian Army and derived geological maps (scale of 1:25,000) have a horizontal accuracy of 65 m, which is more than four times the maximum value allowed by Brazilian legislation (15 m). Worse results were found for geological maps derived from 1:50,000 topographic maps (RMSE = 147 m), for which the maximum allowed value is 30 m. In most cases positional errors are of systematic origin and can be easily corrected (e.g., affine transformation). ASTER GDEM has many holes and is very noisy, making it of little use in the studied area. TOPODATA, which is SRTM kriged from originally 3 to 1 arc-second by the Brazilian National

  17. Detailed geomorphological mapping from high resolution DEM data (LiDAR, TanDEM-X): two case studies from Germany and SE Tibet

    NASA Astrophysics Data System (ADS)

    Loibl, D.

    2012-04-01

    Two major obstacles are hampering the production of high resolution geomorphological maps: the complexity of the subject that should be depicted and the enormous efforts necessary to obtain data by field work. The first factor prevented the establishment of a generally accepted map legend; the second hampered efforts to collect comprehensive sets of geomorphological data. This left geomorphologists to produce applied maps, focusing on very few layers of information and often not sticking to any of the numerous standards proposed in the second half of the 20th century. Technological progress of the recent years, especially in the fields of digital elevation models, GIS environments, and computational hardware, today offers promising opportunities to overcome the obstacles and to produce detailed geomorphological maps even for remote or inhospitable regions. The feasibility of detailed geomorphological mapping from two new sets of digital elevation data, the 1 m LiDAR DTM provided by Germany's State Surveying Authority and the upcoming TanDEM-X DEM, has been evaluated in two case studies from a low mountain range in Germany and a high mountain range in SE Tibet. The results indicate that most layers of information of classical geomorphological maps (e.g. the German GMK) can be extracted from this data at appropriate scales but that significant differences occur concerning the quality and the grades of certainty of key contents. Generally, an enhancement of the geomorphographical, especially the geomorphometrical, and a weakening of geomorphogenetical contents was observed. From these findings, theoretical, methodological, and cartographical remarks on detailed geomorphological mapping from DEM data in GIS environments were educed. As GIS environments decouple data and design and enable the geomorphologist to choose information layer combinations freely to fit research topics, a general purpose legend becomes obsolete. Yet, a unified data structure is demanded to

  18. Quantitative X-ray mapping, scatter diagrams and the generation of correction maps to obtain more information about your material

    NASA Astrophysics Data System (ADS)

    Wuhrer, R.; Moran, K.

    2014-03-01

    Quantitative X-ray mapping with silicon drift detectors and multi-EDS detector systems have become an invaluable analysis technique and one of the most useful methods of X-ray microanalysis today. The time to perform an X-ray map has reduced considerably with the ability to map minor and trace elements very accurately due to the larger detector area and higher count rate detectors. Live X-ray imaging can now be performed with a significant amount of data collected in a matter of minutes. A great deal of information can be obtained from X-ray maps. This includes; elemental relationship or scatter diagram creation, elemental ratio mapping, chemical phase mapping (CPM) and quantitative X-ray maps. In obtaining quantitative x-ray maps, we are able to easily generate atomic number (Z), absorption (A), fluorescence (F), theoretical back scatter coefficient (η), and quantitative total maps from each pixel in the image. This allows us to generate an image corresponding to each factor (for each element present). These images allow the user to predict and verify where they are likely to have problems in our images, and are especially helpful to look at possible interface artefacts. The post-processing techniques to improve the quantitation of X-ray map data and the development of post processing techniques for improved characterisation are covered in this paper.

  19. Seismic Microzonation of Breginjski Kot (NW Slovenia) Based on Detailed Engineering Geological Mapping

    PubMed Central

    2013-01-01

    Breginjski kot is among the most endangered seismic zones in Slovenia with the seismic hazard assessed to intensity IX MSK and the design ground acceleration of 0.250 g, both for 500-year return period. The most destructive was the 1976 Friuli Mw = 6.4 earthquake which had maximum intensity VIII-IX. Since the previous microzonation of the area was based solely on the basic geological map and did not include supplementary field research, we have performed a new soil classification of the area. First, a detailed engineering geological mapping in scale 1 : 5.000 was conducted. Mapped units were described in detail and some of them interpreted anew. Stiff sites are composed of hard to medium-hard rocks which were subjected to erosion mainly evoked by glacial and postglacial age. At that time a prominent topography was formed and different types of sediments were deposited in valleys by mass flows. A distinction between sediments and weathered rocks, their exact position, and thickness are of significant importance for microzonation. On the basis of geological mapping, a soil classification was carried out according to the Medvedev method (intensity increments) and the Eurocode 8 standard (soil factors) and two microzonation maps were prepared. The bulk of the studied area is covered by soft sediments and nine out of ten settlements are situated on them. The microzonation clearly points out the dependence of damage distribution in the case of 1976 Friuli earthquake to local site effects. PMID:24453884

  20. Detailed forest formation mapping in the land cover map series for the Caribbean islands

    NASA Astrophysics Data System (ADS)

    Helmer, E. H.; Schill, S.; Pedreros, D. H.; Tieszen, L. L.; Kennaway, T.; Cushing, M.; Ruzycki, T.

    2006-12-01

    Forest formation and land cover maps for several Caribbean islands were developed from Landsat ETM+ imagery as part of a multi-organizational project. The spatially explicit data on forest formation types will permit more refined estimates of some forest attributes. The woody vegetation classification scheme relates closely to that of Areces-Malea et al. (1), who classify Caribbean vegetation according to standards of the US Federal Geographic Data Committee (FGDC, 1997), with modifications similar to those in Helmer et al. (2). For several of the islands, we developed image mosaics that filled cloudy parts of scenes with data from other scene dates after using regression tree normalization (3). The regression tree procedure permitted us to develop mosaics for wet and drought seasons for a few of the islands. The resulting multiseason imagery facilitated separation between classes such as seasonal evergreen forest, semi-deciduous forest (including semi-evergreen forest), and drought deciduous forest or woodland formations. We used decision tree classification methods to classify the Landsat image mosaics to detailed forest formations and land cover for Puerto Rico (4), St. Kitts and Nevis, St. Lucia, St. Vincent and the Grenadines and Grenada. The decision trees classified a stack of raster layers for each mapping area that included the Landsat image bands and various ancillary raster data layers. For Puerto Rico, for example, the ancillary data included climate parameters (5). For some islands, the ancillary data included topographic derivatives such as aspect, slope and slope position, SRTM (6) or other topographic data. Mapping forest formations with decision tree classifiers, ancillary geospatial data, and cloud-free image mosaics, accurately distinguished spectrally similar forest formations, without the aid of ecological zone maps, on the islands where the approach was used. The approach resulted in maps of forest formations with comparable or better detail

  1. Detailed maps of tropical forest types are within reach: forest tree communities for Trinidad and Tobago mapped with multiseason Landsat and multiseason fine-resolution imagery

    Treesearch

    Eileen H. Helmer; Thomas S. Ruzycki; Jay Benner; Shannon M. Voggesser; Barbara P. Scobie; Courtenay Park; David W. Fanning; Seepersad Ramnarine

    2012-01-01

    Tropical forest managers need detailed maps of forest types for REDD+, but spectral similarity among forest types; cloud and scan-line gaps; and scarce vegetation ground plots make producing such maps with satellite imagery difficult. How can managers map tropical forest tree communities with satellite imagery given these challenges? Here we describe a case study of...

  2. Analysis of multiplex gene expression maps obtained by voxelation.

    PubMed

    An, Li; Xie, Hongbo; Chin, Mark H; Obradovic, Zoran; Smith, Desmond J; Megalooikonomou, Vasileios

    2009-04-29

    Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological disease. Researchers have previously used voxelation in combination with microarrays for acquisition of genome-wide atlases of expression patterns in the mouse brain. On the other hand, some work has been performed on studying gene functions, without taking into account the location information of a gene's expression in a mouse brain. In this paper, we present an approach for identifying the relation between gene expression maps obtained by voxelation and gene functions. To analyze the dataset, we chose typical genes as queries and aimed at discovering similar gene groups. Gene similarity was determined by using the wavelet features extracted from the left and right hemispheres averaged gene expression maps, and by the Euclidean distance between each pair of feature vectors. We also performed a multiple clustering approach on the gene expression maps, combined with hierarchical clustering. Among each group of similar genes and clusters, the gene function similarity was measured by calculating the average gene function distances in the gene ontology structure. By applying our methodology to find similar genes to certain target genes we were able to improve our understanding of gene expression patterns and gene functions. By applying the clustering analysis method, we obtained significant clusters, which have both very similar gene expression maps and very similar gene functions respectively to their corresponding gene ontologies. The cellular component ontology resulted in prominent clusters expressed in cortex and corpus callosum. The molecular function ontology gave prominent clusters in cortex, corpus callosum and hypothalamus. The biological process ontology resulted in clusters in cortex, hypothalamus and choroid plexus. Clusters from all three ontologies combined were most prominently expressed in cortex and corpus callosum. The experimental

  3. Mapping detailed 3D information onto high resolution SAR signatures

    NASA Astrophysics Data System (ADS)

    Anglberger, H.; Speck, R.

    2017-05-01

    Due to challenges in the visual interpretation of radar signatures or in the subsequent information extraction, a fusion with other data sources can be beneficial. The most accurate basis for a fusion of any kind of remote sensing data is the mapping of the acquired 2D image space onto the true 3D geometry of the scenery. In the case of radar images this is a challenging task because the coordinate system is based on the measured range which causes ambiguous regions due to layover effects. This paper describes a method that accurately maps the detailed 3D information of a scene to the slantrange-based coordinate system of imaging radars. Due to this mapping all the contributing geometrical parts of one resolution cell can be determined in 3D space. The proposed method is highly efficient, because computationally expensive operations can be directly performed on graphics card hardware. The described approach builds a perfect basis for sophisticated methods to extract data from multiple complimentary sensors like from radar and optical images, especially because true 3D information from whole cities will be available in the near future. The performance of the developed methods will be demonstrated with high resolution radar data acquired by the space-borne SAR-sensor TerraSAR-X.

  4. Dynamical maps, quantum detailed balance, and the Petz recovery map

    NASA Astrophysics Data System (ADS)

    Alhambra, Álvaro M.; Woods, Mischa P.

    2017-08-01

    Markovian master equations (formally known as quantum dynamical semigroups) can be used to describe the evolution of a quantum state ρ when in contact with a memoryless thermal bath. This approach has had much success in describing the dynamics of real-life open quantum systems in the laboratory. Such dynamics increase the entropy of the state ρ and the bath until both systems reach thermal equilibrium, at which point entropy production stops. Our main result is to show that the entropy production at time t is bounded by the relative entropy between the original state and the state at time 2 t . The bound puts strong constraints on how quickly a state can thermalize, and we prove that the factor of 2 is tight. The proof makes use of a key physically relevant property of these dynamical semigroups, detailed balance, showing that this property is intimately connected with the field of recovery maps from quantum information theory. We envisage that the connections made here between the two fields will have further applications. We also use this connection to show that a similar relation can be derived when the fixed point is not thermal.

  5. Determination of skeleton and sign map for phase obtaining from a single ESPI image

    NASA Astrophysics Data System (ADS)

    Yang, Xia; Yu, Qifeng; Fu, Sihua

    2009-06-01

    A robust method of determining the sign map and skeletons for ESPI images is introduced in this paper. ESPI images have high speckle noise which makes it difficult to obtain the fringe information, especially from a single image. To overcome the effects of high speckle noise, local directional computing windows are designed according to the fringe directions. Then by calculating the gradients from the filtered image in directional windows, sign map and good skeletons can be determined robustly. Based on the sign map, single image phase-extracting methods such as quadrature transform can be improved. And based on skeletons, fringe phases can be obtained directly by normalization methods. Experiments show that this new method is robust and effective for extracting phase from a single ESPI fringe image.

  6. Detailed Mapping of Historical and Preinstrumental Earthquake Ruptures in Central Asia Using Multi-Scale, Multi-Platform Photogrammetry

    NASA Astrophysics Data System (ADS)

    Elliott, A. J.; Walker, R. T.; Parsons, B.; Ren, Z.; Ainscoe, E. A.; Abdrakhmatov, K.; Mackenzie, D.; Arrowsmith, R.; Gruetzner, C.

    2016-12-01

    In regions of the planet with long historical records, known past seismic events can be attributed to specific fault sources through the identification and measurement of single-event scarps in high-resolution imagery and topography. The level of detail captured by modern remote sensing is now sufficient to map and measure complete earthquake ruptures that were originally only sparsely mapped or overlooked entirely. We can thus extend the record of mapped earthquake surface ruptures into the preinstrumental period and capture the wealth of information preserved in the numerous historical earthquake ruptures throughout regions like Central Asia. We investigate two major late 19th and early 20th century earthquakes that are well located macroseismically but whose fault sources had proved enigmatic in the absence of detailed imagery and topography. We use high-resolution topographic models derived from photogrammetry of satellite, low-altitude, and ground-based optical imagery to map and measure the coseismic scarps of the 1889 M8.3 Chilik, Kazakhstan and 1932 M7.6 Changma, China earthquakes. Measurement of the scarps on the combined imagery and topography reveals the extent and slip distribution of coseismic rupture in each of these events, showing both earthquakes involved multiple faults with variable kinematics. We use a 1-m elevation model of the Changma fault derived from Pleiades satellite imagery to map the changing kinematics of the 1932 rupture along strike. For the 1889 Chilik earthquake we use 1.5-m SPOT-6 satellite imagery to produce a regional elevation model of the fault ruptures, from which we identify three distinct, intersecting fault systems that each have >20 km of fresh, single-event scarps. Along sections of each of these faults we construct high resolution (330 points per sq m) elevation models using quadcopter- and helikite-mounted cameras. From the detailed topography we measure single-event oblique offsets of 6-10 m, consistent with the large

  7. The Depositional and Erosional History of Northwestern Aeolis Mons, Gale Crater, Mars: Insights from Detailed 1:2K Geologic Mapping

    NASA Astrophysics Data System (ADS)

    Edgar, L. A.; Calef, F. J., III; Thomson, B. J.

    2017-12-01

    The Mars Science Laboratory (MSL) Curiosity rover is currently exploring the stratigraphy exposed in Aeolis Mons, the central mound of Gale crater. Gale crater has been the target of numerous remote sensing studies, aimed at understanding the origin and evolution of the mound, informally known as Mt. Sharp. A number of efforts have produced geologic maps of the mound and the MSL traverse path, in order to investigate the stratigraphic relationships between different sedimentary units. However, a scale gap exists between local mapping and stratigraphic analyses of the area explored by Curiosity and regional mapping of Aeolis Mons. As Curiosity explores the northwest flank of Aeolis Mons, there is a critical need for investigations to bridge this gap to enable rover-scale observations to be tied to orbital interpretations. This study is focused on detailed geologic mapping and stratigraphic correlations for the northwest flank of Aeolis Mons, including an area that the Curiosity rover will likely explore. The study region covers a 5.8 x 10 km area from approximately 137.27 to 137.44 °E and -4.70 to -4.82 °N. A 25 cm/pixel mosaic produced from images acquired by the High Resolution Imaging Science Experiment (HiRISE) camera provides a basemap for all mapping, and topographic information is provided by a HiRISE 1 m Digital Terrain Model. Preliminary digital geologic mapping was carried out at a scale of 1:10,000 to provide a framework for detailed geologic mapping efforts. Higher-resolution geologic mapping was then conducted at a scale of 1:2,000, and type localities were identified. As a result of newer, higher-resolution datasets that are now available and more narrowly focused mapping, we identify a number of new geologic units. Erosional remnants of some units point to a substantial erosional history. Collectively, the stratigraphy records diverse sedimentary environments and more variability in the depositional and erosional histories than previously identified

  8. New mapping of Radlandi basin and detailed analysis of its inner plains

    NASA Astrophysics Data System (ADS)

    Minelli, Francesco; Giorgetti, Carolina; Mondini, Alessandro; Pauselli, Cristina; Mancinelli, Paolo

    2013-04-01

    NEW MAPPING OF RADITLADI BASIN AND DETAILED ANALYSIS OF ITS INNER PLAINS. Francesco Minelli 1, Carolina Giorgetti 1, Alessandro C. Mondini 2, Cristina Pauselli 1, Paolo Mancinelli1. 1 Gruppo di Geologia Strutturale e Geofisica (GSG), Dipartimento di Scienze della Terra, Università degli Studi di Perugia, 06123, Perugia, Italy . Email: minelli91@yahoo.it. 2 CNR IRPI Perugia, 06123, Perugia. Introduction: The Raditladi basin is a large peak-ring impact crater discovered during the MESSENGER (MErcury Surface, Space ENvironment, GEochemistry, and Ranging) first flyby of Mercury in January 2008 [1]. The Raditladi basin is relatively young [2], and the study of the internal structures give an indication of the processes that acted recently in Mercury's geological history. Geological mapping: We first present the geological mapping of Raditladi crater. In the map we defined different sub-units on the base of previous studies [4][5] and surface morphology and reflectance. Through a GIS software we associated a polygonal layer to each sub-unit, this allowed to distinguish nine different layers. Due to the similarities with the Rachmaninoff basin, to define sub-units mapped on Raditladi, we adopted Rachmaninoff crater's units definitions made by Marchi et al. (2011) [4]. Structures analysis : We also mapped secondary structures consisting in concentric troughs arranged in a circular pattern. We defined two different kinds of troughs: (i) structures characterized by a distinct flat floor and interpretable as grabens, and (ii) structures with linear and curvilinear segments [5]. Inner plain deposit: The analysis of the topography made possible the estimation of the deposit's thickness. The measurement of the thickness is possible thanks to the presence of two small craters, crater A and crater, located in Raditladi's Inner plain. Observing the morphology of the two small craters' rim and hummocky central floor, we distinguished two different units: the shallower consists in

  9. Detailed sections from auger holes in the Elizabethtown 1:100,000-scale map sheet, North Carolina

    USGS Publications Warehouse

    Weems, Robert E.; Lewis, William C.; Murray, Joseph H.; Queen, David B.; Grey, Jeffrey B.; DeJong, Benjamin D.

    2011-01-01

    The Elizabethtown 1:100,000 quadrangle is in the west-central part of the Coastal Plain of southeastern North Carolina. The Coastal Plain, in this region, consists mostly of unlithified sediments that range in age from Late Cretaceous to Holocene. These sediments lie with profound unconformity on complexly deformed metamorphic and igneous rocks similar to rocks found immediately to the west in the Piedmont province. Coastal Plain sediments generally dip gently to the southeast or south and reach a maximum thickness of about 850 feet (ft) in the extreme southeast part of the map area. The gentle southerly and southeasterly dip is disrupted in several areas by faulting. The U.S. Geological Survey recovered one core and augered 196 research test holes in the Elizabethtown 1:100,000 quadrangle to supplement sparse outcrop data in the map area. The recovered sediments were studied and data from these sediments recorded to determine the lithologic characteristics, spatial distribution, and temporal framework of the represented Coastal Plain stratigraphic units. These test holes were critical for accurately determining the distribution of major geologic units and the position of unit boundaries. The detailed descriptions of the subsurface data can be used by geologists, hydrologists, engineers, and community planners to provide a detailed shallow-subsurface stratigraphic framework for the Elizabethtown map region.

  10. Obtaining maps and data from the U.S. Geological Survey*

    USGS Publications Warehouse

    Hallam, C.A.

    1982-01-01

    The U.S. Geological Survey produces a variety of resource information for the United States. This includes many data bases of particular interest to planners such as land use and terrain information prepared by the National Mapping Division, water quantity and quality data collected by Water Resources Division, and coal resource information gathered by the Geologic Division. These data are stored in various forms, and information on their availability can be obtained from appropriate offices in the U.S. Geological Survey as well as from USGS Circular 777. These data have been used for the management, development, and monitoring of our Nation's resources by Federal, State, and local agencies. ?? 1982.

  11. Automated method to differentiate between native and mirror protein models obtained from contact maps.

    PubMed

    Kurczynska, Monika; Kotulska, Malgorzata

    2018-01-01

    Mirror protein structures are often considered as artifacts in modeling protein structures. However, they may soon become a new branch of biochemistry. Moreover, methods of protein structure reconstruction, based on their residue-residue contact maps, need methodology to differentiate between models of native and mirror orientation, especially regarding the reconstructed backbones. We analyzed 130 500 structural protein models obtained from contact maps of 1 305 SCOP domains belonging to all 7 structural classes. On average, the same numbers of native and mirror models were obtained among 100 models generated for each domain. Since their structural features are often not sufficient for differentiating between the two types of model orientations, we proposed to apply various energy terms (ETs) from PyRosetta to separate native and mirror models. To automate the procedure for differentiating these models, the k-means clustering algorithm was applied. Using total energy did not allow to obtain appropriate clusters-the accuracy of the clustering for class A (all helices) was no more than 0.52. Therefore, we tested a series of different k-means clusterings based on various combinations of ETs. Finally, applying two most differentiating ETs for each class allowed to obtain satisfying results. To unify the method for differentiating between native and mirror models, independent of their structural class, the two best ETs for each class were considered. Finally, the k-means clustering algorithm used three common ETs: probability of amino acid assuming certain values of dihedral angles Φ and Ψ, Ramachandran preferences and Coulomb interactions. The accuracies of clustering with these ETs were in the range between 0.68 and 0.76, with sensitivity and selectivity in the range between 0.68 and 0.87, depending on the structural class. The method can be applied to all fully-automated tools for protein structure reconstruction based on contact maps, especially those analyzing

  12. Pluto Color Map

    NASA Image and Video Library

    2017-01-20

    This new, detailed global mosaic color map of Pluto is based on a series of three color filter images obtained by the Ralph/Multispectral Visual Imaging Camera aboard New Horizons during the NASA spacecraft's close flyby of Pluto in July 2015. The mosaic shows how Pluto's large-scale color patterns extend beyond the hemisphere facing New Horizons at closest approach- which were imaged at the highest resolution. North is up; Pluto's equator roughly bisects the band of dark red terrains running across the lower third of the map. Pluto's giant, informally named Sputnik Planitia glacier - the left half of Pluto's signature "heart" feature -- is at the center of this map. http://photojournal.jpl.nasa.gov/catalog/PIA11707

  13. A detailed map of the 660-kilometer discontinuity beneath the izu-bonin subduction zone.

    PubMed

    Wicks, C W; Richards, M A

    1993-09-10

    Dynamical processes in the Earth's mantle, such as cold downwelling at subduction zones, cause deformations of the solid-state phase change that produces a seismic discontinuity near a depth of 660 kilometers. Observations of short-period, shear-to-compressional wave conversions produced at the discontinuity yield a detailed map of deformation beneath the Izu-Bonin subduction zone. The discontinuity is depressed by about 60 kilometers beneath the coldest part of the subducted slab, with a deformation profile consistent with the expected thermal signature of the slab, the experimentally determined Clapeyron slope of the phase transition, and the regional tectonic history.

  14. Automated method to differentiate between native and mirror protein models obtained from contact maps

    PubMed Central

    Kurczynska, Monika

    2018-01-01

    Mirror protein structures are often considered as artifacts in modeling protein structures. However, they may soon become a new branch of biochemistry. Moreover, methods of protein structure reconstruction, based on their residue-residue contact maps, need methodology to differentiate between models of native and mirror orientation, especially regarding the reconstructed backbones. We analyzed 130 500 structural protein models obtained from contact maps of 1 305 SCOP domains belonging to all 7 structural classes. On average, the same numbers of native and mirror models were obtained among 100 models generated for each domain. Since their structural features are often not sufficient for differentiating between the two types of model orientations, we proposed to apply various energy terms (ETs) from PyRosetta to separate native and mirror models. To automate the procedure for differentiating these models, the k-means clustering algorithm was applied. Using total energy did not allow to obtain appropriate clusters–the accuracy of the clustering for class A (all helices) was no more than 0.52. Therefore, we tested a series of different k-means clusterings based on various combinations of ETs. Finally, applying two most differentiating ETs for each class allowed to obtain satisfying results. To unify the method for differentiating between native and mirror models, independent of their structural class, the two best ETs for each class were considered. Finally, the k-means clustering algorithm used three common ETs: probability of amino acid assuming certain values of dihedral angles Φ and Ψ, Ramachandran preferences and Coulomb interactions. The accuracies of clustering with these ETs were in the range between 0.68 and 0.76, with sensitivity and selectivity in the range between 0.68 and 0.87, depending on the structural class. The method can be applied to all fully-automated tools for protein structure reconstruction based on contact maps, especially those analyzing

  15. Using a detailed uncertainty analysis to adjust mapped rates of forest disturbance derived from Landsat time series data (Invited)

    NASA Astrophysics Data System (ADS)

    Cohen, W. B.; Yang, Z.; Stehman, S.; Huang, C.; Healey, S. P.

    2013-12-01

    Forest ecosystem process models require spatially and temporally detailed disturbance data to accurately predict fluxes of carbon or changes in biodiversity over time. A variety of new mapping algorithms using dense Landsat time series show great promise for providing disturbance characterizations at an annual time step. These algorithms provide unprecedented detail with respect to timing, magnitude, and duration of individual disturbance events, and causal agent. But all maps have error and disturbance maps in particular can have significant omission error because many disturbances are relatively subtle. Because disturbance, although ubiquitous, can be a relatively rare event spatially in any given year, omission errors can have a great impact on mapped rates. Using a high quality reference disturbance dataset, it is possible to not only characterize map errors but also to adjust mapped disturbance rates to provide unbiased rate estimates with confidence intervals. We present results from a national-level disturbance mapping project (the North American Forest Dynamics project) based on the Vegetation Change Tracker (VCT) with annual Landsat time series and uncertainty analyses that consist of three basic components: response design, statistical design, and analyses. The response design describes the reference data collection, in terms of the tool used (TimeSync), a formal description of interpretations, and the approach for data collection. The statistical design defines the selection of plot samples to be interpreted, whether stratification is used, and the sample size. Analyses involve derivation of standard agreement matrices between the map and the reference data, and use of inclusion probabilities and post-stratification to adjust mapped disturbance rates. Because for NAFD we use annual time series, both mapped and adjusted rates are provided at an annual time step from ~1985-present. Preliminary evaluations indicate that VCT captures most of the higher

  16. The World Karst Aquifer Mapping project: concept, mapping procedure and map of Europe

    NASA Astrophysics Data System (ADS)

    Chen, Zhao; Auler, Augusto S.; Bakalowicz, Michel; Drew, David; Griger, Franziska; Hartmann, Jens; Jiang, Guanghui; Moosdorf, Nils; Richts, Andrea; Stevanovic, Zoran; Veni, George; Goldscheider, Nico

    2017-05-01

    Karst aquifers contribute substantially to freshwater supplies in many regions of the world, but are vulnerable to contamination and difficult to manage because of their unique hydrogeological characteristics. Many karst systems are hydraulically connected over wide areas and require transboundary exploration, protection and management. In order to obtain a better global overview of karst aquifers, to create a basis for sustainable international water-resources management, and to increase the awareness in the public and among decision makers, the World Karst Aquifer Mapping (WOKAM) project was established. The goal is to create a world map and database of karst aquifers, as a further development of earlier maps. This paper presents the basic concepts and the detailed mapping procedure, using France as an example to illustrate the step-by-step workflow, which includes generalization, differentiation of continuous and discontinuous carbonate and evaporite rock areas, and the identification of non-exposed karst aquifers. The map also shows selected caves and karst springs, which are collected in an associated global database. The draft karst aquifer map of Europe shows that 21.6% of the European land surface is characterized by the presence of (continuous or discontinuous) carbonate rocks; about 13.8% of the land surface is carbonate rock outcrop.

  17. Mapping Bone Mineral Density Obtained by Quantitative Computed Tomography to Bone Volume Fraction

    NASA Technical Reports Server (NTRS)

    Pennline, James A.; Mulugeta, Lealem

    2017-01-01

    Methods for relating or mapping estimates of volumetric Bone Mineral Density (vBMD) obtained by Quantitative Computed Tomography to Bone Volume Fraction (BVF) are outlined mathematically. The methods are based on definitions of bone properties, cited experimental studies and regression relations derived from them for trabecular bone in the proximal femur. Using an experimental range of values in the intertrochanteric region obtained from male and female human subjects, age 18 to 49, the BVF values calculated from four different methods were compared to the experimental average and numerical range. The BVF values computed from the conversion method used data from two sources. One source provided pre bed rest vBMD values in the intertrochanteric region from 24 bed rest subject who participated in a 70 day study. Another source contained preflight vBMD values from 18 astronauts who spent 4 to 6 months on the ISS. To aid the use of a mapping from BMD to BVF, the discussion includes how to formulate them for purpose of computational modeling. An application of the conversions would be used to aid in modeling of time varying changes in vBMD as it relates to changes in BVF via bone remodeling and/or modeling.

  18. A new world natural vegetation map for global change studies.

    PubMed

    Lapola, David M; Oyama, Marcos D; Nobre, Carlos A; Sampaio, Gilvan

    2008-06-01

    We developed a new world natural vegetation map at 1 degree horizontal resolution for use in global climate models. We used the Dorman and Sellers vegetation classification with inclusion of a new biome: tropical seasonal forest, which refers to both deciduous and semi-deciduous tropical forests. SSiB biogeophysical parameters values for this new biome type are presented. Under this new vegetation classification we obtained a consensus map between two global natural vegetation maps widely used in climate studies. We found that these two maps assign different biomes in ca. 1/3 of the continental grid points. To obtain a new global natural vegetation map, non-consensus areas were filled according to regional consensus based on more than 100 regional maps available on the internet. To minimize the risk of using poor quality information, the regional maps were obtained from reliable internet sources, and the filling procedure was based on the consensus among several regional maps obtained from independent sources. The new map was designed to reproduce accurately both the large-scale distribution of the main vegetation types (as it builds on two reliable global natural vegetation maps) and the regional details (as it is based on the consensus of regional maps).

  19. Keratometry obtained by corneal mapping versus the IOLMaster in the prediction of postoperative refraction in routine cataract surgery.

    PubMed

    Dulku, Simon; Smith, Henry B; Antcliff, Richard J

    2013-01-01

    To establish whether simulated keratometry values obtained by corneal mapping (videokeratography) would provide a superior refractive outcome to those obtained by Zeiss IOLMaster (partial coherence interferometry) in routine cataract surgery. Prospective, non-randomized, single-surgeon study set at the The Royal United Hospital, Bath, UK, District General Hospital. Thirty-three patients undergoing routine cataract surgery in the absence of significant ocular comorbidity. Conventional biometry was recorded using the Zeiss IOLMaster. Postoperative refraction was calculated using the SRK/T formula and the most appropriate power of lens implanted. Preoperative keratometry values were also obtained using Humphrey Instruments Atlas Version A6 corneal mapping. Achieved refraction was compared with predicted refraction for the two methods of keratometry after the A-constants were optimized to obtain a mean arithmetic error of zero dioptres for each device. The mean absolute prediction error was 0.39 dioptres (standard deviation 0.29) for IOLMaster and 0.48 dioptres (standard deviation 0.31) for corneal mapping (P = 0.0015). Keratometry readings between the devices were highly correlated by Spearman correlation (0.97). The Bland-Altman plot demonstrated close agreement between keratometers, with a bias of 0.0079 dioptres and 95% limits of agreement of -0.48-0.49 dioptres. The IOLMaster was superior to Humphrey Atlas A6 corneal mapping in the prediction of postoperative refraction. This difference could not have been predicted from the keratometry readings alone. When comparing biometry devices, close agreement between readings should not be considered a substitute for actual postoperative refraction data. © 2012 The Authors. Clinical and Experimental Ophthalmology © 2012 Royal Australian and New Zealand College of Ophthalmologists.

  20. Accuracy and Spatial Variability in GPS Surveying for Landslide Mapping on Road Inventories at a Semi-Detailed Scale: the Case in Colombia

    NASA Astrophysics Data System (ADS)

    Murillo Feo, C. A.; Martnez Martinez, L. J.; Correa Muñoz, N. A.

    2016-06-01

    The accuracy of locating attributes on topographic surfaces when, using GPS in mountainous areas, is affected by obstacles to wave propagation. As part of this research on the semi-automatic detection of landslides, we evaluate the accuracy and spatial distribution of the horizontal error in GPS positioning in the tertiary road network of six municipalities located in mountainous areas in the department of Cauca, Colombia, using geo-referencing with GPS mapping equipment and static-fast and pseudo-kinematic methods. We obtained quality parameters for the GPS surveys with differential correction, using a post-processing method. The consolidated database underwent exploratory analyses to determine the statistical distribution, a multivariate analysis to establish relationships and partnerships between the variables, and an analysis of the spatial variability and calculus of accuracy, considering the effect of non-Gaussian distribution errors. The evaluation of the internal validity of the data provide metrics with a confidence level of 95% between 1.24 and 2.45 m in the static-fast mode and between 0.86 and 4.2 m in the pseudo-kinematic mode. The external validity had an absolute error of 4.69 m, indicating that this descriptor is more critical than precision. Based on the ASPRS standard, the scale obtained with the evaluated equipment was in the order of 1:20000, a level of detail expected in the landslide-mapping project. Modelling the spatial variability of the horizontal errors from the empirical semi-variogram analysis showed predictions errors close to the external validity of the devices.

  1. UAV and SfM in Detailed Geomorphological Mapping of Granite Tors: An Example of Starościńskie Skały (Sudetes, SW Poland)

    NASA Astrophysics Data System (ADS)

    Kasprzak, Marek; Jancewicz, Kacper; Michniewicz, Aleksandra

    2017-11-01

    The paper presents an example of using photographs taken by unmanned aerial vehicles (UAV) and processed using the structure from motion (SfM) procedure in a geomorphological study of rock relief. Subject to analysis is a small rock city in the West Sudetes (SW Poland), known as Starościńskie Skały and developed in coarse granite bedrock. The aims of this paper were, first, to compare UAV/SfM-derived data with the cartographical image based on the traditional geomorphological field-mapping methods and the digital elevation model derived from airborne laser scanning (ALS). Second, to test if the proposed combination of UAV and SfM methods may be helpful in recognizing the detailed structure of granite tors. As a result of conducted UAV flights and digital image post-processing in AgiSoft software, it was possible to obtain datasets (dense point cloud, texture model, orthophotomap, bare-ground-type digital terrain model—DTM) which allowed to visualize in detail the surface of the study area. In consequence, it was possible to distinguish even the very small forms of rock surface microrelief: joints, aplite veins, rills and karren, weathering pits, etc., otherwise difficult to map and measure. The study includes also valorization of particular datasets concerning microtopography and allows to discuss indisputable advantages of using the UAV/SfM-based DTM in geomorphic studies of tors and rock cities, even those located within forest as in the presented case study.

  2. A DArT marker genetic map of perennial ryegrass (Lolium perenne L.) integrated with detailed comparative mapping information; comparison with existing DArT marker genetic maps of Lolium perenne, L. multiflorum and Festuca pratensis.

    PubMed

    King, Julie; Thomas, Ann; James, Caron; King, Ian; Armstead, Ian

    2013-07-03

    Ryegrasses and fescues (genera, Lolium and Festuca) are species of forage and turf grasses which are used widely in agricultural and amenity situations. They are classified within the sub-family Pooideae and so are closely related to Brachypodium distachyon, wheat, barley, rye and oats. Recently, a DArT array has been developed which can be used in generating marker and mapping information for ryegrasses and fescues. This represents a potential common marker set for ryegrass and fescue researchers which can be linked through to comparative genomic information for the grasses. A F2 perennial ryegrass genetic map was developed consisting of 7 linkage groups defined by 1316 markers and deriving a total map length of 683 cM. The marker set included 866 DArT and 315 gene sequence-based markers. Comparison with previous DArT mapping studies in perennial and Italian ryegrass (L. multiflorum) identified 87 and 105 DArT markers in common, respectively, of which 94% and 87% mapped to homoeologous linkage groups. A similar comparison with meadow fescue (F. pratensis) identified only 28 DArT markers in common, of which c. 50% mapped to non-homoelogous linkage groups. In L. perenne, the genetic distance spanned by the DArT markers encompassed the majority of the regions that could be described in terms of comparative genomic relationships with rice, Brachypodium distachyon, and Sorghum bicolor. DArT markers are likely to be a useful common marker resource for ryegrasses and fescues, though the success in aligning different populations through the mapping of common markers will be influenced by degrees of population interrelatedness. The detailed mapping of DArT and gene-based markers in this study potentially allows comparative relationships to be derived in future mapping populations characterised using solely DArT markers.

  3. Changes in the methodology used in the production of the Spanish CORINE: Uncertainty analysis of the new maps

    NASA Astrophysics Data System (ADS)

    García-Álvarez, David; Camacho Olmedo, María Teresa

    2017-12-01

    Since 2012 CORINE has been obtained in Spain from the generalization of a more detailed land cover map (SIOSE). This methodological change has meant the production of a new CORINE map, which is different from the existing ones. To analyze how different the new maps are from the previous ones, as well as the advantages and disadvantages of the new methodology, we carried out a comparison of the CORINE obtained from both methods (traditional and generalization) for the year 2006. The new CORINE is more detailed and it is more coherent with the rest of Spanish Land Use Land Cover (LULC) maps. However, problems have been encountered with regard to the meaning of its classes, the fragmentation of patches and the complexity of its perimeters.

  4. Detailed spatiotemporal brain mapping of chromatic vision combining high-resolution VEP with fMRI and retinotopy.

    PubMed

    Pitzalis, Sabrina; Strappini, Francesca; Bultrini, Alessandro; Di Russo, Francesco

    2018-03-13

    Neuroimaging studies have identified so far, several color-sensitive visual areas in the human brain, and the temporal dynamics of these activities have been separately investigated using the visual-evoked potentials (VEPs). In the present study, we combined electrophysiological and neuroimaging methods to determine a detailed spatiotemporal profile of chromatic VEP and to localize its neural generators. The accuracy of the present co-registration study was obtained by combining standard fMRI data with retinotopic and motion mapping data at the individual level. We found a sequence of occipito activities more complex than that typically reported for chromatic VEPs, including feed-forward and reentrant feedback. Results showed that chromatic human perception arises by the combined activity of at the least five parieto-occipital areas including V1, LOC, V8/VO, and the motion-sensitive dorsal region MT+. However, the contribution of V1 and V8/VO seems dominant because the re-entrant activity in these areas was present more than once (twice in V8/VO and thrice in V1). This feedforward and feedback chromatic processing appears delayed compared with the luminance processing. Associating VEPs and neuroimaging measures, we showed for the first time a complex spatiotemporal pattern of activity, confirming that chromatic stimuli produce intricate interactions of many different brain dorsal and ventral areas. © 2018 Wiley Periodicals, Inc.

  5. CMIS: Crime Map Information System for Safety Environment

    NASA Astrophysics Data System (ADS)

    Kasim, Shahreen; Hafit, Hanayanti; Yee, Ng Peng; Hashim, Rathiah; Ruslai, Husni; Jahidin, Kamaruzzaman; Syafwan Arshad, Mohammad

    2016-11-01

    Crime Map is an online web based geographical information system that assists the public and users to visualize crime activities geographically. It acts as a platform for the public communities to share crime activities they encountered. Crime and violence plague the communities we are living in. As part of the community, crime prevention is everyone's responsibility. The purpose of Crime Map is to provide insights of the crimes occurring around Malaysia and raise the public's awareness on crime activities in their neighbourhood. For that, Crime Map visualizes crime activities on a geographical heat maps, generated based on geospatial data. Crime Map analyse data obtained from crime reports to generate useful information on crime trends. At the end of the development, users should be able to make use of the system to access to details of crime reported, crime analysis and report crimes activities. The development of Crime Map also enable the public to obtain insights about crime activities in their area. Thus, enabling the public to work together with the law enforcer to prevent and fight crime.

  6. Measurable realistic image-based 3D mapping

    NASA Astrophysics Data System (ADS)

    Liu, W.; Wang, J.; Wang, J. J.; Ding, W.; Almagbile, A.

    2011-12-01

    Maps with 3D visual models are becoming a remarkable feature of 3D map services. High-resolution image data is obtained for the construction of 3D visualized models.The3D map not only provides the capabilities of 3D measurements and knowledge mining, but also provides the virtual experienceof places of interest, such as demonstrated in the Google Earth. Applications of 3D maps are expanding into the areas of architecture, property management, and urban environment monitoring. However, the reconstruction of high quality 3D models is time consuming, and requires robust hardware and powerful software to handle the enormous amount of data. This is especially for automatic implementation of 3D models and the representation of complicated surfacesthat still need improvements with in the visualisation techniques. The shortcoming of 3D model-based maps is the limitation of detailed coverage since a user can only view and measure objects that are already modelled in the virtual environment. This paper proposes and demonstrates a 3D map concept that is realistic and image-based, that enables geometric measurements and geo-location services. Additionally, image-based 3D maps provide more detailed information of the real world than 3D model-based maps. The image-based 3D maps use geo-referenced stereo images or panoramic images. The geometric relationships between objects in the images can be resolved from the geometric model of stereo images. The panoramic function makes 3D maps more interactive with users but also creates an interesting immersive circumstance. Actually, unmeasurable image-based 3D maps already exist, such as Google street view, but only provide virtual experiences in terms of photos. The topographic and terrain attributes, such as shapes and heights though are omitted. This paper also discusses the potential for using a low cost land Mobile Mapping System (MMS) to implement realistic image 3D mapping, and evaluates the positioning accuracy that a measureable

  7. Mapping out the Details: Supporting Struggling Writers' Written Expression with Concept Mapping

    ERIC Educational Resources Information Center

    Flanagan, Sara M.; Bouck, Emily C.

    2015-01-01

    Written expression is a key component of the secondary curriculum, but many students struggle to produce effective written expression passages. However, written expression can be supported through prewriting strategies such as concept mapping. Using a counterbalanced group design, 19 secondary students alternated between using paper- or…

  8. A Scheme for Obtaining Secure S-Boxes Based on Chaotic Baker's Map

    NASA Astrophysics Data System (ADS)

    Gondal, Muhammad Asif; Abdul Raheem; Hussain, Iqtadar

    2014-09-01

    In this paper, a method for obtaining cryptographically strong 8 × 8 substitution boxes (S-boxes) is presented. The method is based on chaotic baker's map and a "mini version" of a new block cipher with block size 8 bits and can be easily and efficiently performed on a computer. The cryptographic strength of some 8 × 8 S-boxes randomly produced by the method is analyzed. The results show (1) all of them are bijective; (2) the nonlinearity of each output bit of them is usually about 100; (3) all of them approximately satisfy the strict avalanche criterion and output bits independence criterion; (4) they all have an almost equiprobable input/output XOR distribution.

  9. Detail-enhanced multimodality medical image fusion based on gradient minimization smoothing filter and shearing filter.

    PubMed

    Liu, Xingbin; Mei, Wenbo; Du, Huiqian

    2018-02-13

    In this paper, a detail-enhanced multimodality medical image fusion algorithm is proposed by using proposed multi-scale joint decomposition framework (MJDF) and shearing filter (SF). The MJDF constructed with gradient minimization smoothing filter (GMSF) and Gaussian low-pass filter (GLF) is used to decompose source images into low-pass layers, edge layers, and detail layers at multiple scales. In order to highlight the detail information in the fused image, the edge layer and the detail layer in each scale are weighted combined into a detail-enhanced layer. As directional filter is effective in capturing salient information, so SF is applied to the detail-enhanced layer to extract geometrical features and obtain directional coefficients. Visual saliency map-based fusion rule is designed for fusing low-pass layers, and the sum of standard deviation is used as activity level measurement for directional coefficients fusion. The final fusion result is obtained by synthesizing the fused low-pass layers and directional coefficients. Experimental results show that the proposed method with shift-invariance, directional selectivity, and detail-enhanced property is efficient in preserving and enhancing detail information of multimodality medical images. Graphical abstract The detailed implementation of the proposed medical image fusion algorithm.

  10. Route visualization using detail lenses.

    PubMed

    Karnick, Pushpak; Cline, David; Jeschke, Stefan; Razdan, Anshuman; Wonka, Peter

    2010-01-01

    We present a method designed to address some limitations of typical route map displays of driving directions. The main goal of our system is to generate a printable version of a route map that shows the overview and detail views of the route within a single, consistent visual frame. Our proposed visualization provides a more intuitive spatial context than a simple list of turns. We present a novel multifocus technique to achieve this goal, where the foci are defined by points of interest (POI) along the route. A detail lens that encapsulates the POI at a finer geospatial scale is created for each focus. The lenses are laid out on the map to avoid occlusion with the route and each other, and to optimally utilize the free space around the route. We define a set of layout metrics to evaluate the quality of a lens layout for a given route map visualization. We compare standard lens layout methods to our proposed method and demonstrate the effectiveness of our method in generating aesthetically pleasing layouts. Finally, we perform a user study to evaluate the effectiveness of our layout choices.

  11. Application of OpenStreetMap (OSM) to Support the Mapping Village in Indonesia

    NASA Astrophysics Data System (ADS)

    Swasti Kanthi, Nurin; Hery Purwanto, Taufik

    2016-11-01

    Geospatial Information is a important thing in this era, because the need for location information is needed to know the condition of a region. In 2015 the Indonesian government release detailed mapping in village level and their Parent maps Indonesian state regulatory standards set forth in Rule form Norm Standards, Procedures and Criteria for Mapping Village (NSPK). Over time Web and Mobile GIS was developed with a wide range of applications. The merger between detailed mapping and Web GIS is still rarely performed and not used optimally. OpenStreetMap (OSM) is a WebGIS which can be utilized as Mobile GIS providing sufficient information to the representative levels of the building and can be used for mapping the village.Mapping Village using OSM was conducted using remote sensing approach and Geographical Information Systems (GIS), which's to interpret remote sensing imagery from OSM. The study was conducted to analyzed how far the role of OSM to support the mapping of the village, it's done by entering the house number data, administrative boundaries, public facilities and land use into OSM with reference data and data image Village Plan. The results of the mapping portion villages in OSM as a reference map-making village and analyzed in accordance with NSPK for detailed mapping Rukun Warga (RW) is part of the village mapping. The use of OSM greatly assists the process of mapping the details of the region with data sources in the form of images and can be accessed for Open Source. But still need their care and updating the data source to maintain the validity of the data.

  12. Charon's Surface in Detail

    NASA Image and Video Library

    2017-07-14

    On July 14, 2015, NASA's New Horizons spacecraft made its historic flight through the Pluto system. This detailed, high-quality global mosaic of Pluto's largest moon, Charon, was assembled from nearly all of the highest-resolution images obtained by the Long-Range Reconnaissance Imager (LORRI) and the Multispectral Visible Imaging Camera (MVIC) on New Horizons. The mosaic is the most detailed and comprehensive global view yet of Charon's surface using New Horizons data. It includes topography data of the hemisphere visible to New Horizons during the spacecraft's closest approach. The topography is derived from digital stereo-image mapping tools that measure the parallax -- or the difference in the apparent relative positions -- of features on the surface obtained at different viewing angles during the encounter. Scientists use these parallax displacements of high and low terrain to estimate landform heights. The global mosaic has been overlain with transparent, colorized topography data wherever on the surface stereo data is available. Terrain south of about 30°S was in darkness leading up to and during the flyby, so is shown in black. All feature names on Pluto and Charon are informal. The global mosaic has been overlain with transparent, colorized topography data wherever on their surfaces stereo data is available. Standing out on Charon is the Caleuche Chasma ("C") in the far north, an enormous trough at least 350 kilometers (nearly 220 miles) long, and reaching 14 kilometers (8.5 miles) deep -- more than seven times as deep as the Grand Canyon. https://photojournal.jpl.nasa.gov/catalog/PIA21860

  13. Pluto's Surface in Detail

    NASA Image and Video Library

    2017-07-14

    On July 14, 2015, NASA's New Horizons spacecraft made its historic flight through the Pluto system. This detailed, high-quality global mosaic of Pluto was assembled from nearly all of the highest-resolution images obtained by the Long-Range Reconnaissance Imager (LORRI) and the Multispectral Visible Imaging Camera (MVIC) on New Horizons. The mosaic is the most detailed and comprehensive global view yet of Pluto's surface using New Horizons data. It includes topography data of the hemisphere visible to New Horizons during the spacecraft's closest approach. The topography is derived from digital stereo-image mapping tools that measure the parallax -- or the difference in the apparent relative positions -- of features on the surface obtained at different viewing angles during the encounter. Scientists use these parallax displacements of high and low terrain to estimate landform heights. The global mosaic has been overlain with transparent, colorized topography data wherever on the surface stereo data is available. Terrain south of about 30°S was in darkness leading up to and during the flyby, so is shown in black. Examples of large-scale topographic features on Pluto include the vast expanse of very flat, low-elevation nitrogen ice plains of Sputnik Planitia ("P") -- note that all feature names in the Pluto system are informal -- and, on the eastern edge of the encounter hemisphere, the aligned, high-elevation ridges of Tartarus Dorsa ("T") that host the enigmatic bladed terrain, mountains, possible cryovolcanos, canyons, craters and more. https://photojournal.jpl.nasa.gov/catalog/PIA21861

  14. The recondite intricacies of Zeeman Doppler mapping

    NASA Astrophysics Data System (ADS)

    Stift, M. J.; Leone, F.; Cowley, C. R.

    2012-02-01

    We present a detailed analysis of the reliability of abundance and magnetic maps of Ap stars obtained by Zeeman Doppler mapping (ZDM). It is shown how they can be adversely affected by the assumption of a mean stellar atmosphere instead of appropriate 'local' atmospheres corresponding to the actual abundances in a given region. The essence of the difficulties was already shown by Chandrasekhar's picket-fence model. The results obtained with a suite of Stokes codes written in the ADA programming language and based on modern line-blanketed atmospheres are described in detail. We demonstrate that the high metallicity values claimed to have been found in chemically inhomogeneous (horizontally and vertically) Ap star atmospheres would lead to local temperature structures, continuum and line intensities, and line shapes that differ significantly from those predicted by a mean stellar atmosphere. Unfortunately, past applications of ZDM have consistently overlooked the intricate aspects of metallicity with their all-pervading effects. The erroneous assumption of a mean atmosphere for a spotted star can lead to phase-dependent errors of uncomfortably large proportions at varying wavelengths both in the Stokes I and V profiles, making precise mapping of abundances and magnetic field vectors largely impossible. The relation between core and wings of the Hβ line changes, too, with possible repercussions on the determination of gravity and effective temperature. Finally, a ZDM analysis of the synthetic Stokes spectra of a spotted star reveals the disturbing differences between the respective abundance maps based on a mean atmosphere on the one hand, and on appropriate 'local' atmospheres on the other. We then discuss what this all means for published ZDM results. Our discussion makes it clear that realistic local atmospheres must be used, especially if credible small-scale structures are to be obtained. Recondite: dealing with very profound, difficult or abstruse subject

  15. Global transport in a nonautonomous periodic standard map

    DOE PAGES

    Calleja, Renato C.; del-Castillo-Negrete, D.; Martinez-del-Rio, D.; ...

    2017-04-14

    A non-autonomous version of the standard map with a periodic variation of the perturbation parameter is introduced and studied via an autonomous map obtained from the iteration of the nonautonomous map over a period. Symmetry properties in the variables and parameters of the map are found and used to find relations between rotation numbers of invariant sets. The role of the nonautonomous dynamics on period-one orbits, stability and bifurcation is studied. The critical boundaries for the global transport and for the destruction of invariant circles with fixed rotation number are studied in detail using direct computation and a continuation method.more » In the case of global transport, the critical boundary has a particular symmetrical horn shape. Here, the results are contrasted with similar calculations found in the literature.« less

  16. Global transport in a nonautonomous periodic standard map

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Calleja, Renato C.; del-Castillo-Negrete, D.; Martinez-del-Rio, D.

    A non-autonomous version of the standard map with a periodic variation of the perturbation parameter is introduced and studied via an autonomous map obtained from the iteration of the nonautonomous map over a period. Symmetry properties in the variables and parameters of the map are found and used to find relations between rotation numbers of invariant sets. The role of the nonautonomous dynamics on period-one orbits, stability and bifurcation is studied. The critical boundaries for the global transport and for the destruction of invariant circles with fixed rotation number are studied in detail using direct computation and a continuation method.more » In the case of global transport, the critical boundary has a particular symmetrical horn shape. Here, the results are contrasted with similar calculations found in the literature.« less

  17. Detailed pressure distribution measurements obtained on several configurations of an aspect-ratio-7 variable twist wing

    NASA Technical Reports Server (NTRS)

    Holbrook, G. T.; Dunham, D. M.

    1985-01-01

    Detailed pressure distribution measurements were made for 11 twist configurations of a unique, multisegmented wing model having an aspect ratio of 7 and a taper ratio of 1. These configurations encompassed span loads ranging from that of an untwisted wing to simple flapped wings both with and without upper-surface spoilers attached. For each of the wing twist configurations, electronic scanning pressure transducers were used to obtain 580 surface pressure measurements over the wing in about 0.1 sec. Integrated pressure distribution measurements compared favorably with force-balance measurements of lift on the model when the model centerbody lift was included. Complete plots and tabulations of the pressure distribution data for each wing twist configuration are provided.

  18. Mapping wetlands on beaver flowages with 35-mm photography

    USGS Publications Warehouse

    Kirby, R.E.

    1976-01-01

    Beaver flowages and associated wetlands on the Chippewa National Forest, north-central Minnesota, were photographed from the ground and from the open side window of a small high-wing monoplane. The 35-mm High Speed Ektachrome transparencies obtained were used to map the cover-type associations visible on the aerial photographs. Nearly vertical aerial photos were rectified by projecting the slides onto a base map consisting ofcontrol points located by plane-table survey. Maps were prepared by tracing the recognizable stands of vegetation in the rectified projection at the desired map scale. Final map scales ranging from 1:260 to 1:571 permitted identification and mapping of 26 cover-type associations on 10 study flowages in 1971. This cover-mapping technique was economical and substituted for detailed ground surveys. Comparative data from 10 flowages were collected serially throughout the entire open-water season. Although developed for analysis of waterfowl habitat, the technique has application to other areas of wildlife management and ecological investigation.

  19. Unmanned Aerial Vehicle (UAV) Data Acquisition for Archaeological Site Identification and Mapping

    NASA Astrophysics Data System (ADS)

    Handayani, W.; Ayuningtyas, E. A.; Candra R, F. S.; Arif S, B.; Argadyanto, B.

    2017-12-01

    Archaeological sites as part of human history and located around community are important to be preserved for connecting historical information from generation to generation. Mapping of archaeological sites can be done as one of preservation efforts. Yogyakarta has several archaeological sites such as Pleret Palace, the former royal palace of Mataram Islam in the 16th Century. Data limitations and the difficulty of reconstructing the site sketches into a map become obstacles in archaeological sites mapping. Unmanned Aerial Vehicle (UAV) can be an alternative of high-resolution spatial data acquisition for detail mapping, including archaeological sites mapping. This study aims to see how far the UAV acquisition results can be used for Archaeological Site mapping in Pleret Palace. Data acquisition using UAV generated to mosaic orthophoto, Digital Surface Model (DSM), and Digital Terrain Model (DTM). Archaeological sites identified using DTM and matched with site sketch made by Cultural Agency. From these data, it can be recognized some relics form, such as palace fortress, moats and canals, and also dikes of Segarayasa. This research is expected to be a reference in archaeological site mapping using detailed spatial data, especially UAV. Furthermore, it can be obtained archaeological site map close to real condition; as well as archaeological sites preservation in Indonesia.

  20. Elemental mapping of biological samples using a scanning proton microprobe

    NASA Astrophysics Data System (ADS)

    Watt, F.; Grime, G. W.

    1988-03-01

    Elemental mapping using a scanning proton microprobe (SPM) can be a powerful technique for probing trace elements in biology, allowing complex interfaces to be studied in detail, identifying contamination and artefacts present in the specimen, and in certain circumstances obtaining indirect chemical information. Examples used to illustrate the advantages of the technique include the elemental mapping of growing pollen tubes, honey bee brain section, a mouse macrophage cell, human liver section exhibiting primary biliary cirrhosis, and the attack by a mildew fungus on a pea leaf.

  1. Oil Exploration Mapping

    NASA Technical Reports Server (NTRS)

    1994-01-01

    After concluding an oil exploration agreement with the Republic of Yemen, Chevron International needed detailed geologic and topographic maps of the area. Chevron's remote sensing team used imagery from Landsat and SPOT, combining images into composite views. The project was successfully concluded and resulted in greatly improved base maps and unique topographic maps.

  2. The LANDSAT system operated in Brazil by CNPq/INPE - results obtained in the area of mapping and future perspectives

    NASA Technical Reports Server (NTRS)

    Dejesusparada, N. (Principal Investigator); Barbosa, M. N.

    1981-01-01

    The LANDSAT system, operated in the country by CNPg/INPE since 1973, systematically acquires, produces, and distributes both multispectral and panchromatic images obtained through remote sensing satellites to thousands of researchers and technicians involved in the natural resources survey. To cooperate in the solution of national problems, CNPq/INPE is developing efforts in the area of manipulation of those images with the objective of making them useful as planimetric bases for the simple revision of already published maps or for its utilization as basic material in regions not yet reliability mapped. The results obtained from performed tests are presented and the existing limitations are discussed. The new system purchased to handle data from the next series of LANDSAT as well as from MAPSAT and SPOT which will be in operation within the 80's decade, and are designed not only for natural resources survey but also for the solution of cartographic problems.

  3. A method to correct coordinate distortion in EBSD maps

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhang, Y.B., E-mail: yubz@dtu.dk; Elbrønd, A.; Lin, F.X.

    2014-10-15

    Drift during electron backscatter diffraction mapping leads to coordinate distortions in resulting orientation maps, which affects, in some cases significantly, the accuracy of analysis. A method, thin plate spline, is introduced and tested to correct such coordinate distortions in the maps after the electron backscatter diffraction measurements. The accuracy of the correction as well as theoretical and practical aspects of using the thin plate spline method is discussed in detail. By comparing with other correction methods, it is shown that the thin plate spline method is most efficient to correct different local distortions in the electron backscatter diffraction maps. -more » Highlights: • A new method is suggested to correct nonlinear spatial distortion in EBSD maps. • The method corrects EBSD maps more precisely than presently available methods. • Errors less than 1–2 pixels are typically obtained. • Direct quantitative analysis of dynamic data are available after this correction.« less

  4. Generalization of the Schwarz-Christoffel mapping to multiply connected polygonal domains.

    PubMed

    Vasconcelos, Giovani L

    2014-06-08

    A generalization of the Schwarz-Christoffel mapping to multiply connected polygonal domains is obtained by making a combined use of two preimage domains, namely, a rectilinear slit domain and a bounded circular domain. The conformal mapping from the circular domain to the polygonal region is written as an indefinite integral whose integrand consists of a product of powers of the Schottky-Klein prime functions, which is the same irrespective of the preimage slit domain, and a prefactor function that depends on the choice of the rectilinear slit domain. A detailed derivation of the mapping formula is given for the case where the preimage slit domain is the upper half-plane with radial slits. Representation formulae for other canonical slit domains are also obtained but they are more cumbersome in that the prefactor function contains arbitrary parameters in the interior of the circular domain.

  5. The SCUBA map reduction cookbook

    NASA Astrophysics Data System (ADS)

    Sandell, G.; Jessop, N.; Jenness, T.

    This cookbook tells you how to reduce and analyze maps obtained with SCUBA using the off-line SCUBA reduction package, SURF, and the Starlink KAPPA, Figaro, GAIA and CONVERT applications. The easiest way of using these packages is to run-up ORAC-DR, a general purpose pipeline for reducing data from any telescope. A set of data reduction recipes are available to ORAC-DR for use when working with scuba maps, these recipes utilize the SURF and KAPPA packages. This cookbook makes no attempts to explain why and how, for that there is a comprehensive Starlink User Note 216 which properly documents all the software tasks in SURF, which should be consulted for those who need to know details of a task, or how the task really works.

  6. Computer generated maps from digital satellite data - A case study in Florida

    NASA Technical Reports Server (NTRS)

    Arvanitis, L. G.; Reich, R. M.; Newburne, R.

    1981-01-01

    Ground cover maps are important tools to a wide array of users. Over the past three decades, much progress has been made in supplementing planimetric and topographic maps with ground cover details obtained from aerial photographs. The present investigation evaluates the feasibility of using computer maps of ground cover from satellite input tapes. Attention is given to the selection of test sites, a satellite data processing system, a multispectral image analyzer, general purpose computer-generated maps, the preliminary evaluation of computer maps, a test for areal correspondence, the preparation of overlays and acreage estimation of land cover types on the Landsat computer maps. There is every indication to suggest that digital multispectral image processing systems based on Landsat input data will play an increasingly important role in pattern recognition and mapping land cover in the years to come.

  7. USGS US topo maps for Alaska

    USGS Publications Warehouse

    Anderson, Becci; Fuller, Tracy

    2014-01-01

    In July 2013, the USGS National Geospatial Program began producing new topographic maps for Alaska, providing a new map series for the state known as US Topo. Prior to the start of US Topo map production in Alaska, the most detailed statewide USGS topographic maps were 15-minute 1:63,360-scale maps, with their original production often dating back nearly fifty years. The new 7.5-minute digital maps are created at 1:25,000 map scale, and show greatly increased topographic detail when compared to the older maps. The map scale and data specifications were selected based on significant outreach to various map user groups in Alaska. This multi-year mapping initiative will vastly enhance the base topographic maps for Alaska and is possible because of improvements to key digital map datasets in the state. The new maps and data are beneficial in high priority applications such as safety, planning, research and resource management. New mapping will support science applications throughout the state and provide updated maps for parks, recreation lands and villages.

  8. Localization and Mapping Using a Non-Central Catadioptric Camera System

    NASA Astrophysics Data System (ADS)

    Khurana, M.; Armenakis, C.

    2018-05-01

    This work details the development of an indoor navigation and mapping system using a non-central catadioptric omnidirectional camera and its implementation for mobile applications. Omnidirectional catadioptric cameras find their use in navigation and mapping of robotic platforms, owing to their wide field of view. Having a wider field of view, or rather a potential 360° field of view, allows the system to "see and move" more freely in the navigation space. A catadioptric camera system is a low cost system which consists of a mirror and a camera. Any perspective camera can be used. A platform was constructed in order to combine the mirror and a camera to build a catadioptric system. A calibration method was developed in order to obtain the relative position and orientation between the two components so that they can be considered as one monolithic system. The mathematical model for localizing the system was determined using conditions based on the reflective properties of the mirror. The obtained platform positions were then used to map the environment using epipolar geometry. Experiments were performed to test the mathematical models and the achieved location and mapping accuracies of the system. An iterative process of positioning and mapping was applied to determine object coordinates of an indoor environment while navigating the mobile platform. Camera localization and 3D coordinates of object points obtained decimetre level accuracies.

  9. Mapping urban geology of the city of Girona, Catalonia

    NASA Astrophysics Data System (ADS)

    Vilà, Miquel; Torrades, Pau; Pi, Roser; Monleon, Ona

    2016-04-01

    A detailed and systematic geological characterization of the urban area of Girona has been conducted under the project '1:5000 scale Urban geological map of Catalonia' of the Catalan Geological Survey (Institut Cartogràfic i Geològic de Catalunya). The results of this characterization are organized into: i) a geological information system that includes all the information acquired; ii) a stratigraphic model focused on identification, characterization and correlation of the geological materials and structures present in the area and; iii) a detailed geological map that represents a synthesis of all the collected information. The mapping project integrates in a GIS environment pre-existing cartographic documentation (geological and topographical), core data from compiled boreholes, descriptions of geological outcrops within the urban network and neighbouring areas, physico-chemical characterisation of representative samples of geological materials, detailed geological mapping of Quaternary sediments, subsurface bedrock and artificial deposits and, 3D modelling of the main geological surfaces. The stratigraphic model is structured in a system of geological units that from a chronostratigrafic point of view are structured in Palaeozoic, Paleogene, Neogene, Quaternary and Anthropocene. The description of the geological units is guided by a systematic procedure. It includes the main lithological and structural features of the units that constitute the geological substratum and represents the conceptual base of the 1:5000 urban geological map of the Girona metropolitan area, which is organized into 6 map sheets. These map sheets are composed by a principal map, geological cross sections and, several complementary maps, charts and tables. Regardless of the geological map units, the principal map also represents the main artificial deposits, features related to geohistorical processes, contours of outcrop areas, information obtained in stations, borehole data, and contour

  10. X-ray structure determination using low-resolution electron microscopy maps for molecular replacement

    DOE PAGES

    Jackson, Ryan N.; McCoy, Airlie J.; Terwilliger, Thomas C.; ...

    2015-07-30

    Structures of multi-subunit macromolecular machines are primarily determined by either electron microscopy (EM) or X-ray crystallography. In many cases, a structure for a complex can be obtained at low resolution (at a coarse level of detail) with EM and at higher resolution (with finer detail) by X-ray crystallography. The integration of these two structural techniques is becoming increasingly important for generating atomic models of macromolecular complexes. A low-resolution EM image can be a powerful tool for obtaining the "phase" information that is missing from an X-ray crystallography experiment, however integration of EM and X-ray diffraction data has been technically challenging.more » Here we show a step-by-step protocol that explains how low-resolution EM maps can be placed in the crystallographic unit cell by molecular replacement, and how initial phases computed from the placed EM density are extended to high resolution by averaging maps over non-crystallographic symmetry. As the resolution gap between EM and Xray crystallography continues to narrow, the use of EM maps to help with X-ray crystal structure determination, as described in this protocol, will become increasingly effective.« less

  11. A Detailed RFLP Map of Cotton, Gossypium Hirsutum X Gossypium Barbadense: Chromosome Organization and Evolution in a Disomic Polyploid Genome

    PubMed Central

    Reinisch, A. J.; Dong, J. M.; Brubaker, C. L.; Stelly, D. M.; Wendel, J. F.; Paterson, A. H.

    1994-01-01

    We employ a detailed restriction fragment length polymorphism (RFLP) map to investigate chromosome organization and evolution in cotton, a disomic polyploid. About 46.2% of nuclear DNA probes detect RFLPs distinguishing Gossypium hirsutum and Gossypium barbadense; and 705 RFLP loci are assembled into 41 linkage groups and 4675 cM. The subgenomic origin (A vs. D) of most, and chromosomal identity of 14 (of 26), linkage groups is shown. The A and D subgenomes show similar recombinational length, suggesting that repetitive DNA in the physically larger A subgenome is recombinationally inert. RFLPs are somewhat more abundant in the D subgenome. Linkage among duplicated RFLPs reveals 11 pairs of homoeologous chromosomal regions-two appear homosequential, most differ by inversions, and at least one differs by a translocation. Most homoeologies involve chromosomes from different subgenomes, putatively reflecting the n = 13 to n = 26 polyploidization event of 1.1-1.9 million years ago. Several observations suggest that another, earlier, polyploidization event spawned n = 13 cottons, at least 25 million years ago. The cotton genome contains about 400-kb DNA per cM, hence map-based gene cloning is feasible. The cotton map affords new opportunities to study chromosome evolution, and to exploit Gossypium genetic resources for improvement of the world's leading natural fiber. PMID:7851778

  12. Towards molecular design using 2D-molecular contour maps obtained from PLS regression coefficients

    NASA Astrophysics Data System (ADS)

    Borges, Cleber N.; Barigye, Stephen J.; Freitas, Matheus P.

    2017-12-01

    The multivariate image analysis descriptors used in quantitative structure-activity relationships are direct representations of chemical structures as they are simply numerical decodifications of pixels forming the 2D chemical images. These MDs have found great utility in the modeling of diverse properties of organic molecules. Given the multicollinearity and high dimensionality of the data matrices generated with the MIA-QSAR approach, modeling techniques that involve the projection of the data space onto orthogonal components e.g. Partial Least Squares (PLS) have been generally used. However, the chemical interpretation of the PLS-based MIA-QSAR models, in terms of the structural moieties affecting the modeled bioactivity has not been straightforward. This work describes the 2D-contour maps based on the PLS regression coefficients, as a means of assessing the relevance of single MIA predictors to the response variable, and thus allowing for the structural, electronic and physicochemical interpretation of the MIA-QSAR models. A sample study to demonstrate the utility of the 2D-contour maps to design novel drug-like molecules is performed using a dataset of some anti-HIV-1 2-amino-6-arylsulfonylbenzonitriles and derivatives, and the inferences obtained are consistent with other reports in the literature. In addition, the different schemes for encoding atomic properties in molecules are discussed and evaluated.

  13. Mars Global Geologic Mapping: Amazonian Results

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Dohm, J. M.; Irwin, R.; Kolb, E. J.; Skinner, J. A., Jr.; Hare, T. M.

    2008-01-01

    We are in the second year of a five-year effort to map the geology of Mars using mainly Mars Global Surveyor, Mars Express, and Mars Odyssey imaging and altimetry datasets. Previously, we have reported on details of project management, mapping datasets (local and regional), initial and anticipated mapping approaches, and tactics of map unit delineation and description [1-2]. For example, we have seen how the multiple types and huge quantity of image data as well as more accurate and detailed altimetry data now available allow for broader and deeper geologic perspectives, based largely on improved landform perception, characterization, and analysis. Here, we describe early mapping results, which include updating of previous northern plains mapping [3], including delineation of mainly Amazonian units and regional fault mapping, as well as other advances.

  14. Generalization of the Schwarz–Christoffel mapping to multiply connected polygonal domains

    PubMed Central

    Vasconcelos, Giovani L.

    2014-01-01

    A generalization of the Schwarz–Christoffel mapping to multiply connected polygonal domains is obtained by making a combined use of two preimage domains, namely, a rectilinear slit domain and a bounded circular domain. The conformal mapping from the circular domain to the polygonal region is written as an indefinite integral whose integrand consists of a product of powers of the Schottky-Klein prime functions, which is the same irrespective of the preimage slit domain, and a prefactor function that depends on the choice of the rectilinear slit domain. A detailed derivation of the mapping formula is given for the case where the preimage slit domain is the upper half-plane with radial slits. Representation formulae for other canonical slit domains are also obtained but they are more cumbersome in that the prefactor function contains arbitrary parameters in the interior of the circular domain. PMID:24910523

  15. Detailed petrophysical characterization enhances geological mapping of a buried substratum using aeromagnetic and gravity data; application to the southwestern Paris basin

    NASA Astrophysics Data System (ADS)

    Baptiste, Julien; Martelet, Guillaume; Faure, Michel; Beccaletto, Laurent; Chen, Yan; Reninger, Pierre-Alexandre

    2016-04-01

    Mapping the geometries (structure and lithology) of a buried basement is a key for targeting resources and for improving the regional geological knowledge. The Paris basin is a Mesozoic to Cenozoic intraplate basin set up on a Variscan substratum, which crops out in the surrounding massifs. We focus our study on the southwestern part of the Paris basin at its junction with the Aquitaine basin. This Mezo-Cenozoic cover separates the Armorican Massif and the Massif Central which compose of several litho-tectonic units bounded by crustal-scale shear zones. In spite of several lithological and structural correlations between various domains of the two massifs, their geological connection, hidden below the Paris basin sedimentary cover, is still largely debated. Potential field geophysics have proven effective for mapping buried basin/basement interfaces. In order to enhance the cartographic interpretation of these data, we have set up a detailed petrophysical library (field magnetic susceptibility data and density measurements on rock samples) of the Paleozoic rocks outcropping in the Variscan massifs. The combination of aeromagnetic and gravity data supported by the petrophysical signatures and field/borehole geological information, is carried out to propose a new map of the architecture of the Variscan substratum. The new synthetic map of geophysical signature of the Paris basin basement combines: i) the magnetic anomaly reduced to the pole, ii) the vertical gradient of the Bouguer anomaly and iii) the tilt derivative of the magnetic anomaly reduced to the pole. Based on this information, the Eastern extension of the major shear zones below the sedimentary cover is assessed. The petrophysical signatures were classified in three classes of magnetic susceptibility and density: low, intermediate and high. Basic rocks have high magnetization and density values whereas granite, migmatite and orthogneiss show low magnetization and density values, Proterozoic and Paleozoic

  16. Mapping montane vegetation in Southern California from color infrared imagery

    NASA Technical Reports Server (NTRS)

    Minnich, R. A.; Bowden, L. W.; Pease, R. W.

    1969-01-01

    Mapping a large area in California like the San Bernardino Mountains, demonstrated that color infrared photography is suitable for detailed mapping and offers potential for quantitative mapping. The level of information presented is comparable or superior to the most detailed mapping by ground survey.

  17. Coastal habitat mapping in the Aegean Sea using high resolution orthophoto maps

    NASA Astrophysics Data System (ADS)

    Topouzelis, Konstantinos; Papakonstantinou, Apostolos; Doukari, Michaela; Stamatis, Panagiotis; Makri, Despina; Katsanevakis, Stelios

    2017-09-01

    The significance of coastal habitat mapping lies in the need to prevent from anthropogenic interventions and other factors. Until 2015, Landsat-8 (30m) imagery were used as medium spatial resolution satellite imagery. So far, Sentinel-2 satellite imagery is very useful for more detailed regional scale mapping. However, the use of high resolution orthophoto maps, which are determined from UAV data, is expected to improve the mapping accuracy. This is due to small spatial resolution of the orthophoto maps (30 cm). This paper outlines the integration of UAS for data acquisition and Structure from Motion (SfM) pipeline for the visualization of selected coastal areas in the Aegean Sea. Additionally, the produced orthophoto maps analyzed through an object-based image analysis (OBIA) and nearest-neighbor classification for mapping the coastal habitats. Classification classes included the main general habitat types, i.e. seagrass, soft bottom, and hard bottom The developed methodology applied at the Koumbara beach (Ios Island - Greece). Results showed that UAS's data revealed the sub-bottom complexity in large shallow areas since they provide such information in the spatial resolution that permits the mapping of seagrass meadows with extreme detail. The produced habitat vectors are ideal as reference data for studies with satellite data of lower spatial resolution.

  18. Global Seabed Materials and Habitats Mapped: The Computational Methods

    NASA Astrophysics Data System (ADS)

    Jenkins, C. J.

    2016-02-01

    What the seabed is made of has proven difficult to map on the scale of whole ocean-basins. Direct sampling and observation can be augmented with proxy-parameter methods such as acoustics. Both avenues are essential to obtain enough detail and coverage, and also to validate the mapping methods. We focus on the direct observations such as samplings, photo and video, probes, diver and sub reports, and surveyed features. These are often in word-descriptive form: over 85% of the records for site materials are in this form, whether as sample/view descriptions or classifications, or described parameters such as consolidation, color, odor, structures and components. Descriptions are absolutely necessary for unusual materials and for processes - in other words, for research. This project dbSEABED not only has the largest collection of seafloor materials data worldwide, but it uses advanced computing math to obtain the best possible coverages and detail. Included in those techniques are linguistic text analysis (e.g., Natural Language Processing, NLP), fuzzy set theory (FST), and machine learning (ML, e.g., Random Forest). These techniques allow efficient and accurate import of huge datasets, thereby optimizing the data that exists. They merge quantitative and qualitative types of data for rich parameter sets, and extrapolate where the data are sparse for best map production. The dbSEABED data resources are now very widely used worldwide in oceanographic research, environmental management, the geosciences, engineering and survey.

  19. Technical details of sentinel lymph node mapping in colorectal cancer and its impact on staging.

    PubMed

    Saha, S; Wiese, D; Badin, J; Beutler, T; Nora, D; Ganatra, B K; Desai, D; Kaushal, S; Nagaraju, M; Arora, M; Singh, T

    2000-03-01

    Sentinel lymph node (SLN) mapping for melanoma and breast cancer has greatly enhanced the identification of micrometastases in many patients, thereby upstaging a subset of these patients. The purpose of this study was to see if SLN mapping technique could be used to identify SLNs in colorectal cancer and to assess its impact on pathological staging and treatment. At the time of surgery, 1 ml of Lymphazurin 1% was injected subserosally around the tumor without injecting into the lumen. The first to fourth blue nodes identified were considered the SLNs, which have the highest probability to contain metastases. A standard oncological resection of the bowel was then performed. Multilevel microsections of the SLNs, including a detailed pathological examination of the entire specimen, was performed. SLN was successfully identified in 85 (98.8%) of 86 patients. In 85 patients, there were 1,367 (16 per patient) lymph nodes examined, of which 140 (1.6 per patient) were identified as SLNs. In 53 (95%) of 56, of whom the SLNs were without metastases (negative), all other non-SLNs also were negative. In 29 (34% of 85) patients, SLNs were positive for metastases; in 14 of the 29 patients, other non-SLNs also were positive in addition to the SLNs. In the other 15 of the 29 patients (18% of 85 patients), SLNs were the only site of metastases, and all other non-SLNs were negative. In 7 patients (8.2% of 85 patients), micrometastases were identified only in 1 or 2 of the 10 sections of a single SLN. In five of seven patients, such micrometastases were detected by hematoxylin and eosin staining and immunohistochemistry; in the other two patients, it was detected only by immunohistochemistry. In patients with negative SLNs, the rate of occurrence of micrometastases in non-SLNs was 5 (0.4%) of 1,184 lymph nodes. SLN mapping can be performed easily in colorectal cancer patients, with an accuracy of more than 95%. The identification of submicroscopic lymph node metastases by this

  20. Mapping Wildfire Ignition Probability Using Sentinel 2 and LiDAR (Jerte Valley, Cáceres, Spain).

    PubMed

    Sánchez Sánchez, Yolanda; Martínez-Graña, Antonio; Santos Francés, Fernando; Mateos Picado, Marina

    2018-03-09

    Wildfire is a major threat to the environment, and this threat is aggravated by different climatic and socioeconomic factors. The availability of detailed, reliable mapping and periodic and immediate updates makes wildfire prevention and extinction work more effective. An analyst protocol has been generated that allows the precise updating of high-resolution thematic maps. For this protocol, images obtained through the Sentinel 2A satellite, with a return time of five days, have been merged with Light Detection and Ranging (LiDAR) data with a density of 0.5 points/m² in order to obtain vegetation mapping with an accuracy of 88% (kappa = 0.86), which is then extrapolated to fuel model mapping through a decision tree. This process, which is fast and reliable, serves as a cartographic base for the later calculation of ignition-probability mapping. The generated cartography is a fundamental tool to be used in the decision making involved in the planning of preventive silvicultural treatments, extinguishing media distribution, infrastructure construction, etc.

  1. Seafloor mapping of the southeast Iberian margin (from Cabo de Palos to Cabo de Gata)

    NASA Astrophysics Data System (ADS)

    Lastras, Galderic; Leon, César; Elvira, Elena; Pascual, Laura; Muñoz, Araceli; de Cárdenas, Enrique; Acosta, Juan; Canals, Miquel

    2014-05-01

    We present the multibeam bathymetry and derived maps of the southeast Iberian margin from Cabo de Palos to Cabo de Gata, 37º35'N to 35º45'N and 2º10'W to 0º20'E, from the coastline down to the Algero-Balearic abyssal plain at depths exceeding 2600 m. The edition of of the maps is carried out within the Complementary Action VALORPLAT ("Scientific valorisation of multibeam bathymetry data from the Spanish continental shelf and slope"), funded by the Spanish Ministry of Economy and Competitivity. The multibeam bathymetry data of the slope and abyssal plain were obtained during different surveys in 2004, 2006 and 2007 on board R/V Vizconde de Eza with a Simrad EM300 multibeam echo-sounder as part of the CAPESME Project, a collaboration between the Spanish Institute of Oceanography (IEO) and General Secretariat of Fisheries (SGP), primarily aiming at creating maps of the fishing grounds of the Mediterranean continental margins of Spain. Multibeam bathymetry data from the continental shelf were obtained within the ESPACE project, also in a cooperative frame between IEO and SGP. The map series is constituted by a general map at 1:400,000 scale and 14 detailed maps at 1:75,000 scale, which include inset maps on slope gradients and seafloor nature (rock or sediment type), the later obtained with rock dredges and Shipeck sediment dredges. Both the detailed maps and the general map are available in paper print, and the whole collection is also distributed in an edited USB. The geological features displayed in the different maps include the continental shelf, with abundant geomorphic features indicative of past sea-level changes, the continental slope carved by the Palos, Tiñoso, Cartagena Este, Cartagena Oeste, Águilas, Almanzora, Alias, Garrucha and Gata submarine canyons, the Mazarrón, Palomares and Al-Mansour escarpments, the Abubácer, Maimonides and Yusuf ridges, the Águilas and Al-Mansour seamounts, and the Algero-Balearic abyssal plain where prominent

  2. IntegratedMap: a Web interface for integrating genetic map data.

    PubMed

    Yang, Hongyu; Wang, Hongyu; Gingle, Alan R

    2005-05-01

    IntegratedMap is a Web application and database schema for storing and interactively displaying genetic map data. Its Web interface includes a menu for direct chromosome/linkage group selection, a search form for selection based on mapped object location and linkage group displays. An overview display provides convenient access to the full range of mapped and anchored object types with genetic locus details, such as numbers, types and names of mapped/anchored objects displayed in a compact scrollable list box that automatically updates based on selected map location and object type. Also, multilinkage group and localized map views are available along with links that can be configured for integration with other Web resources. IntegratedMap is implemented in C#/ASP.NET and the package, including a MySQL schema creation script, is available from http://cggc.agtec.uga.edu/Data/download.asp

  3. On the map: Nature and Science editorials.

    PubMed

    Waaijer, Cathelijn J F; van Bochove, Cornelis A; van Eck, Nees Jan

    2011-01-01

    Bibliometric mapping of scientific articles based on keywords and technical terms in abstracts is now frequently used to chart scientific fields. In contrast, no significant mapping has been applied to the full texts of non-specialist documents. Editorials in Nature and Science are such non-specialist documents, reflecting the views of the two most read scientific journals on science, technology and policy issues. We use the VOSviewer mapping software to chart the topics of these editorials. A term map and a document map are constructed and clusters are distinguished in both of them. The validity of the document clustering is verified by a manual analysis of a sample of the editorials. This analysis confirms the homogeneity of the clusters obtained by mapping and augments the latter with further detail. As a result, the analysis provides reliable information on the distribution of the editorials over topics, and on differences between the journals. The most striking difference is that Nature devotes more attention to internal science policy issues and Science more to the political influence of scientists. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11192-010-0205-9) contains supplementary material, which is available to authorized users.

  4. Three-dimensional digital mapping of the optic nerve head cupping in glaucoma

    NASA Astrophysics Data System (ADS)

    Mitra, Sunanda; Ramirez, Manuel; Morales, Jose

    1992-08-01

    Visualization of the optic nerve head cupping is clinically achieved by stereoscopic viewing of a fundus image pair of the suspected eye. A novel algorithm for three-dimensional digital surface representation of the optic nerve head, using fusion of stereo depth map with a linearly stretched intensity image of a stereo fundus image pair, is presented. Prior to depth map acquisition, a number of preprocessing tasks including feature extraction, registration by cepstral analysis, and correction for intensity variations are performed. The depth map is obtained by using a coarse to fine strategy for obtaining disparities between corresponding areas. The required matching techniques to obtain the translational differences in every step, uses cepstral analysis and correlation-like scanning technique in the spatial domain for the finest details. The quantitative and precise representation of the optic nerve head surface topography following this algorithm is not computationally intensive and should provide more useful information than just qualitative stereoscopic viewing of the fundus as one of the diagnostic criteria for diagnosis of glaucoma.

  5. Benefits Mapping and Analysis Program (BenMAP)

    EPA Pesticide Factsheets

    This area summarizes the key features of the BenMAP-CE program and links to pages that provide more details regarding the program, the basic principles of air pollution benefits analysis and a link to download the software.

  6. Susceptibility-based functional brain mapping by 3D deconvolution of an MR-phase activation map.

    PubMed

    Chen, Zikuan; Liu, Jingyu; Calhoun, Vince D

    2013-05-30

    The underlying source of T2*-weighted magnetic resonance imaging (T2*MRI) for brain imaging is magnetic susceptibility (denoted by χ). T2*MRI outputs a complex-valued MR image consisting of magnitude and phase information. Recent research has shown that both the magnitude and the phase images are morphologically different from the source χ, primarily due to 3D convolution, and that the source χ can be reconstructed from complex MR images by computed inverse MRI (CIMRI). Thus, we can obtain a 4D χ dataset from a complex 4D MR dataset acquired from a brain functional MRI study by repeating CIMRI to reconstruct 3D χ volumes at each timepoint. Because the reconstructed χ is a more direct representation of neuronal activity than the MR image, we propose a method for χ-based functional brain mapping, which is numerically characterised by a temporal correlation map of χ responses to a stimulant task. Under the linear imaging conditions used for T2*MRI, we show that the χ activation map can be calculated from the MR phase map by CIMRI. We validate our approach using numerical simulations and Gd-phantom experiments. We also analyse real data from a finger-tapping visuomotor experiment and show that the χ-based functional mapping provides additional activation details (in the form of positive and negative correlation patterns) beyond those generated by conventional MR-magnitude-based mapping. Copyright © 2013 Elsevier B.V. All rights reserved.

  7. Detailed mapping of surface units on Mars with HRSC color data

    NASA Astrophysics Data System (ADS)

    Combe, J.-Ph.; Wendt, L.; McCord, T. B.; Neukum, G.

    2008-09-01

    phyllosilicates form generally bright outcrops with complex contour lines that allow visual discrimination, even if this bright color is similar to well-illuminated bright red dust. When the surface is spectrally diverse like Marwth Vallis, contrast enhancement may be sufficient to reveal subtle color differences that correspond to different types of materials (Fig. 1a). However, those remain faint color variations as all the bands are highly correlated. Principal Component Analysis (PCA) PCA is a tool for decorrelation and noise removal that maximizes color unit differences. On Marwth Vallis, PCA highlights the diversity of the surface on a spectacular way (Fig. 1b). Those images may be compared to the maps of mineral composition obtained by [11] from spectral analysis imaging spectrometer data. Part of the information in Fig. 1b is likely related to surface roughness because of the complex geometry of observation of the instrument. Furthermore, only an extremely clear atmosphere and low-compressed datasets allow obtaining such sharp results. Consequently, the meaning of the colors varies from image-to-image and is qualitative only. More quantitative and comparable results require spectral analysis, either to remove or to normalize atmospheric and geometric effects. Spectral analysis on HRSC data For this application the surface units to be distinguished have to possess linear independent color vectors in the five-dimensional color space of HRSC data. It has been shown by [2-5] that on the global scale, only four spectral endmembers representing red, iron oxide-rich material, dark, basaltic material, and ice plus a shade component containing effects of observation and illumination geometry, are sufficient to explain most of the colors present in HRSC color imagery. We assess this at our test areas contain a maximum of surface mineralogy diversity by applying refined methods to model (and remove) the shade contribution in order to test if a further surface component can be

  8. Mediterranean maquis fuel model development and mapping to support fire modeling

    NASA Astrophysics Data System (ADS)

    Bacciu, V.; Arca, B.; Pellizzaro, G.; Salis, M.; Ventura, A.; Spano, D.; Duce, P.

    2009-04-01

    Fuel load data and fuel model maps represent a critical issue for fire spread and behaviour modeling. The availability of accurate input data at different spatial and temporal scales can allow detailed analysis and predictions of fire hazard and fire effects across a landscape. Fuel model data are used in spatially explicit fire growth models to attain fire behaviour information for fuel management in prescribed fires, fire management applications, firefighters training, smoke emissions, etc. However, fuel type characteristics are difficult to be parameterized due to their complexity and variability: live and dead materials with different size contribute in different ways to the fire spread and behaviour. In the last decades, a strong help was provided by the use of remote sensing imagery at high spatial and spectral resolution. Such techniques are able to capture fine scale fuel distributions for accurate fire growth projections. Several attempts carried out in Europe were devoted to fuel classification and map characterization. In Italy, fuel load estimation and fuel model definition are still critical issues to be addressed due to the lack of detailed information. In this perspective, the aim of the present work was to propose an integrated approach based on field data collection, fuel model development and fuel model mapping to provide fuel models for the Mediterranean maquis associations. Field data needed for the development of fuel models were collected using destructive and non destructive measurements in experimental plots located in Northern Sardinia (Italy). Statistical tests were used to identify the main fuel types that were classified into four custom fuel models. Subsequently, a supervised classification by the Maximum Likelihood algorithm was applied on IKONOS images to identify and map the different types of maquis vegetation. The correspondent fuel model was then associated to each vegetation type to obtain the fuel model map. The results show the

  9. Symplectic Propagation of the Map, Tangent Map and Tangent Map Derivative through Quadrupole and Combined-Function Dipole Magnets without Truncation

    NASA Astrophysics Data System (ADS)

    Bruhwiler, D. L.; Cary, J. R.; Shasharina, S.

    1998-04-01

    The MAPA accelerator modeling code symplectically advances the full nonlinear map, tangent map and tangent map derivative through all accelerator elements. The tangent map and its derivative are nonlinear generalizations of Browns first- and second-order matrices(K. Brown, SLAC-75, Rev. 4 (1982), pp. 107-118.), and they are valid even near the edges of the dynamic aperture, which may be beyond the radius of convergence for a truncated Taylor series. In order to avoid truncation of the map and its derivatives, the Hamiltonian is split into pieces for which the map can be obtained analytically. Yoshidas method(H. Yoshida, Phys. Lett. A 150 (1990), pp. 262-268.) is then used to obtain a symplectic approximation to the map, while the tangent map and its derivative are appropriately composed at each step to obtain them with equal accuracy. We discuss our splitting of the quadrupole and combined-function dipole Hamiltonians and show that typically few steps are required for a high-energy accelerator.

  10. MCTP system model based on linear programming optimization of apertures obtained from sequencing patient image data maps.

    PubMed

    Ureba, A; Salguero, F J; Barbeiro, A R; Jimenez-Ortega, E; Baeza, J A; Miras, H; Linares, R; Perucha, M; Leal, A

    2014-08-01

    with photon and electron modulated beams (IMRT + MERT); and a prostatic bed case (Case III) with a pronounced concave-shaped PTV by using volumetric modulated arc therapy. In the three cases, the required target prescription doses and constraints on organs at risk were fulfilled in a short enough time to allow routine clinical implementation. The quality assurance protocol followed to check CARMEN system showed a high agreement with the experimental measurements. A Monte Carlo treatment planning model exclusively based on maps performed from patient imaging data has been presented. The sequencing of these maps allows obtaining deliverable apertures which are weighted for modulation under a linear programming formulation. The model is able to solve complex radiotherapy treatments with high accuracy in an efficient computation time.

  11. High-Resolution Sequence-Function Mapping of Full-Length Proteins

    PubMed Central

    Kowalsky, Caitlin A.; Klesmith, Justin R.; Stapleton, James A.; Kelly, Vince; Reichkitzer, Nolan; Whitehead, Timothy A.

    2015-01-01

    Comprehensive sequence-function mapping involves detailing the fitness contribution of every possible single mutation to a gene by comparing the abundance of each library variant before and after selection for the phenotype of interest. Deep sequencing of library DNA allows frequency reconstruction for tens of thousands of variants in a single experiment, yet short read lengths of current sequencers makes it challenging to probe genes encoding full-length proteins. Here we extend the scope of sequence-function maps to entire protein sequences with a modular, universal sequence tiling method. We demonstrate the approach with both growth-based selections and FACS screening, offer parameters and best practices that simplify design of experiments, and present analytical solutions to normalize data across independent selections. Using this protocol, sequence-function maps covering full sequences can be obtained in four to six weeks. Best practices introduced in this manuscript are fully compatible with, and complementary to, other recently published sequence-function mapping protocols. PMID:25790064

  12. Mapping of volcanic units at Alba Patera, Mars

    NASA Technical Reports Server (NTRS)

    Cattermole, Peter

    1987-01-01

    Detailed photogeologic mapping of Alba Patera, Northern Tharsis, was completed and a geologic map prepared. This was supplemented by a series of detailed volcanic flow maps and used to study the morphometry of different flow types and analyze the way in which the behavior of the volcano has changed with time and also the manner in which flow fields developed in different sectors of the structure.

  13. Geologic map of south-central Yucca Mountain, Nye County, Nevada

    USGS Publications Warehouse

    Dickerson, Robert P.; Drake II, Ronald M.

    2004-01-01

    New 1:6,000-scale geologic mapping in a 20-square-kilometer area near the south end of Yucca Mountain, Nevada, which is the proposed site of an underground repository for the storage of high-level radioactive wastes, substantially supplements the stratigraphic and structural data obtained from earlier, 1:24,000-scale mapping. Principal observations and interpretations resulting from the larger scale, more detailed nature of the recent investigation include: (1) the thickness of the Miocene Tiva Canyon Tuff decreases from north to south within the map area, and the lithophysal zones within the formation have a greater lateral variability than in areas farther north; and (2) fault relations are far more complex than shown on previous maps, with both major (block-bounding) and minor (intrablock) faults showing much lateral variation in (a) the number of splays and (b) the amount, distribution, and width of anastomosing breccia and fracture zones.

  14. Crossed-beam velocity map imaging of collisional autoionization processes

    NASA Astrophysics Data System (ADS)

    Delmdahl, Ralph F.; Bakker, Bernard L. G.; Parker, David H.

    2000-11-01

    Applying the velocity map imaging technique Penning ion formation as well as generation of associative ions is observed in autoionizing collisions of metastable neon atoms (Ne* 2p5 3s 3P2,0) with ground state argon targets in a crossed molecular beam experiment. Metastable neon reactants are obtained by nozzle expansion through a dc discharge ring. The quality of the obtained results clearly demonstrates the suitability of this new, particularly straightforward experimental approach with respect to angle and kinetic energy resolved investigations of Penning processes in crossed-beam studies which are known to provide the highest level of detail.

  15. Mapping the human atria with optical coherence tomography

    NASA Astrophysics Data System (ADS)

    Lye, Theresa H.; Gan, Yu; Hendon, Christine P.

    2017-02-01

    Atrial structure plays an important role in the mechanisms of atrial disease. However, detailed imaging of human atria remains limited due to many imaging modalities lacking sufficient resolution. We propose the use of optical coherence tomography (OCT), which has micrometer resolution and millimeter-scale imaging depth well-suited for the atria, combined with image stitching algorithms, to develop large, detailed atria image maps. Human atria samples (n = 7) were obtained under approved protocols from the National Disease Research Interchange (NDRI). One right atria sample was imaged using an ultrahigh-resolution spectral domain OCT system, with 5.52 and 2.72 μm lateral and axial resolution in air, respectively, and 1.78 mm imaging depth. Six left atria and five pulmonary vein samples were imaged using the spectral domain OCT system, Telesto I (Thorlabs GmbH, Germany) with 15 and 6.5 μm lateral and axial resolution in air, respectively, and 2.51 mm imaging depth. Overlapping image volumes were obtained from areas of the human left and right atria and the pulmonary veins. Regions of collagen, adipose, and myocardium could be identified within the OCT images. Image stitching was applied to generate fields of view with side dimensions up to about 3 cm. This study established steps towards mapping large regions of the human atria and pulmonary veins in high resolution using OCT.

  16. Applications of Skylab EREP photographs to mapping landforms and environmental geomorphology in the Great Plains and Midwest

    NASA Technical Reports Server (NTRS)

    Morrison, R. B.; Lineback, J. A.; Fuller, H. K.; Rinkenberger, R. K.

    1975-01-01

    The following evaluations of Skylab photographs were undertaken: (1) the 1290 Skylab S190A and S190B photographs of Illinois, Iowa, Kansas, Missouri, Nebraska, and South Dakota were evaluated in detail in terms of coverage, cloud cover, photographic quality, endlap, detectability of roads and stereorelief, and utility for geomorphologic mapping, and (2) the utility of the Skylab photos were tested for interpretive analytic mapping of geomorphologic features over large areas representative of different parts of this region. Photointerpretative maps of analytic geomorphology were obtained for various test areas representative of the varied landscapes in the region. These maps are useful for regional land-use planning, ground-water exploration, and other environmental geomorphologic-geologic applications. Compared with LANDSAT-1 MSS images, Skylab photos afford almost as extensive overviews of large areas but in considerably greater detail, and for many SL photos, moderate stereorelief. However, repetitive multiseasonal, cloud-free coverage by high-quality photos is very limited and many areas have no coverage at all.

  17. Geologic Mapping of the Martian Impact Crater Tooting

    NASA Technical Reports Server (NTRS)

    Mouginis-Mark, Peter; Boyce, Joseph M.

    2008-01-01

    Tooting crater is approximately 29 km in diameters, is located at 23.4 deg N, 207.5 deg E and is classified as a multi-layered ejecta crater. Tooting crater is a very young crater, with an estimated age of 700,000 to 2M years. The crater formed on virtually flat lava flows within Amazonis Planitia where there appears to have been no major topographic features prior to the impact, so that we can measure ejecta thickness and cavity volume. In the past 12 months, the authors have: published their first detailed analysis of the geometry of the crater cavity and the distribution of the ejecta layers; refined the geologic map of the interior of Tooting crater through mapping of the cavity at a scale of 1:1100K; and continued the analysis of an increasing number of high resolution images obtained by the CTX and HiRISE instruments. Currently the authors seek to resolve several science issues that have been identified during this mapping, including: what is the origin of the lobate flows on the NW and SW rims of the crater?; how did the ejecta curtain break apart during the formation of the crater, and how uniform was the emplacement process for the ejecta layers; and, can we infer physical characteristics about the ejecta? Future study plans include the completion of a draft geologic map of Tooting crater and submission of it to the U.S. Geological survey for a preliminary review, publishing a second research paper on the detailed geology of the crater cavity and the distribution of the flows on the crater rim, and completing the map text for the 1:100K geologic map description of units at Tooting crater.

  18. Airborne gamma-ray spectrometer and magnetometer survey, Durango D, Colorado. Final report Volume II B. Detail area

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1983-01-01

    This volume comprises eight appendices containing the following information for the Durango D detail area: flight line maps, geology maps, explanation of geologic legend, flight line/geology maps, radiometric contour maps, magnetic contour maps, multi-variant analysis maps, and geochemical factor analysis maps.

  19. Airborne gamma-ray spectrometer and magnetometer survey, Durango B, Colorado. Final report Volume II C. Detail area

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1983-01-01

    This volume contains eight appendices: flight line maps, geology maps, explanation of geologic legend, flight line/geology maps, radiometric contour maps, magnetic contour maps, multi-variant analysis maps, and geochemical factor analysis maps. These appendices pertain to the Durango B detail area.

  20. Airborne gamma-ray spectrometer and magnetometer survey, Durango C, Colorado. Final report Volume II B. Detail area

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1983-01-01

    This volume comprises eight appendices containing the following information for the Durango C detail area: flight line maps, geology maps, explanation of geologic legend, flight line/geology maps, radiometric contour maps, magnetic contour maps, multi-variant analysis maps, and geochemical factor analysis maps.

  1. Geomorphic Unit Tool (GUT): Applications of Fluvial Mapping

    NASA Astrophysics Data System (ADS)

    Kramer, N.; Bangen, S. G.; Wheaton, J. M.; Bouwes, N.; Wall, E.; Saunders, C.; Bennett, S.; Fortney, S.

    2017-12-01

    Geomorphic units are the building blocks of rivers and represent distinct habitat patches for many fluvial organisms. We present the Geomorphic Unit Toolkit (GUT), a flexible GIS geomorphic unit mapping tool, to generate maps of fluvial landforms from topography. GUT applies attributes to landforms based on flow stage (Tier 1), topographic signatures (Tier 2), geomorphic characteristics (Tier 3) and patch characteristics (Tier 4) to derive attributed maps at the level of detail required by analysts. We hypothesize that if more rigorous and consistent geomorphic mapping is conducted, better correlations between physical habitat units and ecohydraulic model results will be obtained compared to past work. Using output from GUT for coarse bed tributary streams in the Columbia River Basin, we explore relationships between salmonid habitat and geomorphic spatial metrics. We also highlight case studies of how GUT can be used to showcase geomorphic impact from large wood restoration efforts. Provided high resolution topography exists, this tool can be used to quickly assess changes in fluvial geomorphology in watersheds impacted by human activities.

  2. Improved Lunar Iron Map Obtained by the Kaguya Gamma-Ray Spectrometer

    NASA Astrophysics Data System (ADS)

    Naito, M.; Hasebe, N.; Nagaoka, H.; Shibamura, E.; Ohtake, M.; Kim, K. J.; Wöhler, C.; Berezhnoy, A. A.

    2018-04-01

    The lunar iron distribution is determined by the observation data of Kaguya Gamma-ray Spectrometer (KGRS). The excellent energy resolution of KGRS enables us to produce high quality FeO map with lower limit of about 3 wt%.

  3. Mapping Wildfire Ignition Probability Using Sentinel 2 and LiDAR (Jerte Valley, Cáceres, Spain)

    PubMed Central

    Sánchez Sánchez, Yolanda; Mateos Picado, Marina

    2018-01-01

    Wildfire is a major threat to the environment, and this threat is aggravated by different climatic and socioeconomic factors. The availability of detailed, reliable mapping and periodic and immediate updates makes wildfire prevention and extinction work more effective. An analyst protocol has been generated that allows the precise updating of high-resolution thematic maps. For this protocol, images obtained through the Sentinel 2A satellite, with a return time of five days, have been merged with Light Detection and Ranging (LiDAR) data with a density of 0.5 points/m2 in order to obtain vegetation mapping with an accuracy of 88% (kappa = 0.86), which is then extrapolated to fuel model mapping through a decision tree. This process, which is fast and reliable, serves as a cartographic base for the later calculation of ignition-probability mapping. The generated cartography is a fundamental tool to be used in the decision making involved in the planning of preventive silvicultural treatments, extinguishing media distribution, infrastructure construction, etc. PMID:29522460

  4. Coastal mapping handbook

    USGS Publications Warehouse

    ,; ,; Ellis, Melvin Y.

    1978-01-01

    Passage of the Coastal Zone Management Act of 1972 focused attention on the Nation's coastal land and water areas. As plans for more effective management of the coastal zone evolved, it soon became apparent that improved maps and charts of these areas were needed. This handbook was prepared with the requirements of the entire coastal community in mind, giving greatest attention to the needs of coastal zone managers and planners at the State and local levels. Its principal objective is to provide general information and guidance; it is neither a textbook nor a technical manual, but rather a primer on coastal mapping. This handbook should help planners and managers of coastal programs to determine their mapping requirements, select the best maps and charts for their particular needs, and to deal effectively with personnel who gather data and prepare maps. The sections on "Sources of Assistance and Advice" and "Product and Data Sources" should be especially useful to all involved in mapping the coastal zone. Brief summaries of the mapping efforts of several State coastal zone management programs are included. "Future outlook" discusses anticipated progress and changes in mapping procedures and techniques. Illustrations are inserted, where appropriate, to illustrate the products and equipment discussed. Because of printing restrictions, the colors in map illustrations may vary from those in the original publication. The appendixes include substantial material which also should be of interest. In addition a glossary and an index are included to provide easy and quick access to the terms and concepts used in the text. For those interested in more technical detail than is provided in this handbook, the "Selected references" will be useful. Also, the publications of the professional societies listed in appendix 4 will provide technical information in detail.

  5. Preliminary northeast Asia geodynamics map

    USGS Publications Warehouse

    Parfenov, Leonid M.; Khanchuk, Alexander I.; Badarch, Gombosuren; Miller, Robert J.; Naumova, Vera V.; Nokleberg, Warren J.; Ogasawara, Masatsugu; Prokopiev, Andrei V.; Yan, Hongquan

    2003-01-01

    This map portrays the geodynamics of Northeast Asia at a scale of 1:5,000,000 using the concepts of plate tectonics and analysis of terranes and overlap assemblages. The map is the result of a detailed compilation and synthesis at 5 million scale and is part of a major international collaborative study of the Mineral Resources, Metallogenesis, and Tectonics of Northeast Asia conducted from 1997 through 2002 by geologists from earth science agencies and universities in Russia, Mongolia, Northeastern China, South Korea, Japan, and the USA. This map is the result of extensive geologic mapping and associated tectonic studies in Northeast Asia in the last few decades and is the first collaborative compilation of the geology of the region at a scale of 1:5,000,000 by geologists from Russia, Mongolia, Northeastern China, South Korea, Japan, and the USA. The map was compiled by a large group of international geologists using the below concepts and definitions during collaborative workshops over a six-year period. The map is a major new compilation and re-interpretation of pre-existing geologic maps of the region. The map is designed to be used for several purposes, including regional tectonic analyses, mineral resource and metallogenic analysis, petroleum resource analysis, neotectonic analysis, and analysis of seismic hazards and volcanic hazards. The map consists of two sheets. Sheet 1 displays the map at a scale of 1:5,000,000, explanation. Sheet 2 displays the introduction, list of map units, and source references. Detailed descriptions of map units and stratigraphic columns are being published separately. This map is one of a series of publications on the mineral resources, metallogenesis, and geodynamics,of Northeast Asia. Companion studies and other articles and maps , and various detailed reports are: (1) a compilation of major mineral deposit models (Rodionov and Nokleberg, 2000; Rodionov and others, 2000; Obolenskiy and others, in press a); (2) a series of

  6. Detailed gravity survey to help seismic microzonation: Mapping the thickness of unconsolidated deposits in Ottawa, Canada

    NASA Astrophysics Data System (ADS)

    Lamontagne, M.; Thomas, M.; Silliker, J.; Jobin, D.

    2011-11-01

    In this study, measurements of gravity were made to map and model the thickness of Quaternary deposits (sand and clay) overlying Ordovician limestones in a suburb of Ottawa (Orléans, Ontario). Because ground motion amplification is partly related to the thickness of unconsolidated deposits, this work helps refine the assessment of the earthquake damage potential of the area. It also helps the mapping of clay basins, which can locally exceed 100 m in thickness, where ground motion amplification can occur. Previous work, including well log data and seismic methods, have yielded a wealth of information on near-surface geology in Orléans, thereby providing the necessary constraints to test the applicability of gravity modeling in other locations where other methods cannot always be used. Some 104 gravity stations were occupied in an 8 × 12 km test area in the Orléans. Stations were accurately located with differential GPS that provided centimetric accuracy in elevation. Densities of the unconsolidated Quaternary deposits (Champlain Sea clay) determined on core samples and densities determined on limestone samples from outcrops were used to constrain models of the clay layer overlying the higher density bedrock formations (limestone). The gravity anomaly map delineates areas where clay basins attain > 100 m depth. Assuming a realistic density for the Champlain Sea clays (1.9-2.1 g/cm 3), the thickness over the higher density bedrock formations (Ordovician carbonate rocks) was modeled and compared with well logs and two seismic reflection profiles. The models match quite well with the information determined from well logs and seismic methods. It was found that gravity and the thickness of unconsolidated deposits are correlated but the uncertainties in both data sets preclude the definition of a direct correlation between the two. We propose that gravity measurements at a local scale be used as an inexpensive means of mapping the thickness of unconsolidated deposits

  7. Planetary maps

    USGS Publications Warehouse

    ,

    1992-01-01

    An important goal of the USGS planetary mapping program is to systematically map the geology of the Moon, Mars, Venus, and Mercury, and the satellites of the outer planets. These geologic maps are published in the USGS Miscellaneous Investigations (I) Series. Planetary maps on sale at the USGS include shaded-relief maps, topographic maps, geologic maps, and controlled photomosaics. Controlled photomosaics are assembled from two or more photographs or images using a network of points of known latitude and longitude. The images used for most of these planetary maps are electronic images, obtained from orbiting television cameras, various optical-mechanical systems. Photographic film was only used to map Earth's Moon.

  8. Mars Global Geologic Mapping: About Half Way Done

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Dohm, J. M.; Irwin, R.; Kolb, E. J.; Skinner, J. A., Jr.; Hare, T. M.

    2009-01-01

    We are in the third year of a five-year effort to map the geology of Mars using mainly Mars Global Surveyor, Mars Express, and Mars Odyssey imaging and altimetry datasets. Previously, we have reported on details of project management, mapping datasets (local and regional), initial and anticipated mapping approaches, and tactics of map unit delineation and description [1-2]. For example, we have seen how the multiple types and huge quantity of image data as well as more accurate and detailed altimetry data now available allow for broader and deeper geologic perspectives, based largely on improved landform perception, characterization, and analysis. Here, we describe mapping and unit delineation results thus far, a new unit identified in the northern plains, and remaining steps to complete the map.

  9. A genome-scale map of expression for a mouse brain section obtained using voxelation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Chin, Mark H.; Geng, Alex B.; Khan, Arshad H.

    Gene expression signatures in the mammalian brain hold the key to understanding neural development and neurological diseases. We have reconstructed 2- dimensional images of gene expression for 20,000 genes in a coronal slice of the mouse brain at the level of the striatum by using microarrays in combination with voxelation at a resolution of 1 mm3. Good reliability of the microarray results were confirmed using multiple replicates, subsequent quantitative RT-PCR voxelation, mass spectrometry voxelation and publicly available in situ hybridization data. Known and novel genes were identified with expression patterns localized to defined substructures within the brain. In addition, genesmore » with unexpected patterns were identified and cluster analysis identified a set of genes with a gradient of dorsal/ventral expression not restricted to known anatomical boundaries. The genome-scale maps of gene expression obtained using voxelation will be a valuable tool for the neuroscience community.« less

  10. Obtaining 3D Chemical Maps by Energy Filtered Transmission Electron Microscopy Tomography.

    PubMed

    Roiban, Lucian; Sorbier, Loïc; Hirlimann, Charles; Ersen, Ovidiu

    2018-06-09

    Energy filtered transmission electron microscopy tomography (EFTEM tomography) can provide three-dimensional (3D) chemical maps of materials at a nanometric scale. EFTEM tomography can separate chemical elements that are very difficult to distinguish using other imaging techniques. The experimental protocol described here shows how to create 3D chemical maps to understand the chemical distribution and morphology of a material. Sample preparation steps for data segmentation are presented. This protocol permits the 3D distribution analysis of chemical elements in a nanometric sample. However, it should be noted that currently, the 3D chemical maps can only be generated for samples that are not beam sensitive, since the recording of filtered images requires long exposure times to an intense electron beam. The protocol was applied to quantify the chemical distribution of the components of two different heterogeneous catalyst supports. In the first study, the chemical distribution of aluminum and titanium in titania-alumina supports was analyzed. The samples were prepared using the swing-pH method. In the second, the chemical distribution of aluminum and silicon in silica-alumina supports that were prepared using the sol-powder and mechanical mixture methods was examined.

  11. Airborne gamma-ray spectrometer and magnetometer survey, Durango A, B, C, and D, Colorado. Volume I. Detail area. Final report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1983-01-01

    An airborne combined radiometric and magnetic survey was performed for the Department of Energy (DOE) over the Durango A, Durango B, Durango C, and Durango D Detail Areas of southwestern Colorado. The Durango A Detail Area is within the coverage of the Needle Mountains and Silverton 15' map sheets, and the Pole Creek Mountain, Rio Grande Pyramid, Emerald Lake, Granite Peak, Vallecito Reservoir, and Lemon Reservoir 7.5' map sheets of the National Topographic Map Series (NTMS). The Durango B Detail Area is within the coverage of the Silverton 15' map sheet and the Wetterhorn Peak, Uncompahgre Peak, Lake City, Redcloudmore » Peak, Lake San Cristobal, Pole Creek Mountain, and Finger Mesa 7.5' map sheets of the NTMS. The Durango C Detail Area is within the coverage of the Platoro and Wolf Creek Pass 15' map sheets of the NTMS. The Durango D Detail Area is within the coverage of the Granite Lake, Cimarrona Peak, Bear Mountain, and Oakbrush Ridge 7.5' map sheets of the NTMS. Radiometric data were corrected for live time, aircraft and equipment background, cosmic background, atmospheric radon, Compton scatter, and altitude dependence. The corrected data were statistically evaluated, gridded, and contoured to produce maps of the radiometric variables, uranium, potassium, and thorium; their ratios; and the residual magnetic field. These maps have been analyzed in order to produce a multi-variant analysis contour map based on the radiometric response of the individual geological units. A geochemical analysis has been performed, using the radiometric and magnetic contour maps, the multi-variant analysis map, and factor analysis techniques, to produce a geochemical analysis map for the area.« less

  12. Bedrock geologic map of Vermont

    USGS Publications Warehouse

    Ratcliffe, Nicholas M.; Stanley, Rolfe S.; Gale, Marjorie H.; Thompson, Peter J.; Walsh, Gregory J.; With contributions by Hatch, Norman L.; Rankin, Douglas W.; Doolan, Barry L.; Kim, Jonathan; Mehrtens, Charlotte J.; Aleinikoff, John N.; McHone, J. Gregory; Cartography by Masonic, Linda M.

    2011-01-01

    The Bedrock Geologic Map of Vermont is the result of a cooperative agreement between the U.S. Geological Survey (USGS) and the State of Vermont. The State's complex geology spans 1.4 billion years of Earth's history. The new map comes 50 years after the most recent map of the State by Charles G. Doll and others in 1961 and a full 150 years since the publication of the first geologic map of Vermont by Edward Hitchcock and others in 1861. At a scale of 1:100,000, the map shows an uncommon level of detail for State geologic maps. Mapped rock units are primarily based on lithology, or rock type, to facilitate derivative studies in multiple disciplines. The 1961 map was compiled from 1:62,500-scale or smaller maps. The current map was created to integrate more detailed (1:12,000- to 1:24,000-scale) modern and older (1:62,500-scale) mapping with the theory of plate tectonics to provide a framework for geologic, tectonic, economic, hydrogeologic, and environmental characterization of the bedrock of Vermont. The printed map consists of three oversize sheets (52 x 76 inches). Sheets 1 and 2 show the southern and northern halves of Vermont, respectively, and can be trimmed and joined so that the entire State can be displayed as a single entity. These sheets also include 10 cross sections and a geologic structure map. Sheet 3 on the front consists of descriptions of 486 map units, a correlation of map units, and references cited. Sheet 3 on the back features a list of the 195 sources of geologic map data keyed to an index map of 7.5-minute quadrangles in Vermont, as well as a table identifying ages of rocks dated by uranium-lead zircon geochronology.

  13. BOREAS TE-23 Map Plot Data

    NASA Technical Reports Server (NTRS)

    Rich, Paul M.; Fournier, Robert; Hall, Forrest G. (Editor); Papagno, Andrea (Editor)

    2000-01-01

    The Boreal Ecosystem-Atmospheric Study (BOREAS) TE-23 (Terrestrial Ecology) team collected map plot data in support of its efforts to characterize and interpret information on canopy architecture and understory cover at the BOREAS tower flux sites and selected auxiliary sites from May to August 1994. Mapped plots (typical dimensions 50 m x 60 m) were set up and characterized at all BOREAS forested tower flux and selected auxiliary sites. Detailed measurement of the mapped plots included: (1) stand characteristics (location, density, basal area); (2) map locations diameter at breast height (DBH) of all trees; (3) detailed geometric measures of a subset of trees (height, crown dimensions); and (4) understory cover maps. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  14. Mapping PDB chains to UniProtKB entries.

    PubMed

    Martin, Andrew C R

    2005-12-01

    UniProtKB/SwissProt is the main resource for detailed annotations of protein sequences. This database provides a jumping-off point to many other resources through the links it provides. Among others, these include other primary databases, secondary databases, the Gene Ontology and OMIM. While a large number of links are provided to Protein Data Bank (PDB) files, obtaining a regularly updated mapping between UniProtKB entries and PDB entries at the chain or residue level is not straightforward. In particular, there is no regularly updated resource which allows a UniProtKB/SwissProt entry to be identified for a given residue of a PDB file. We have created a completely automatically maintained database which maps PDB residues to residues in UniProtKB/SwissProt and UniProtKB/trEMBL entries. The protocol uses links from PDB to UniProtKB, from UniProtKB to PDB and a brute-force sequence scan to resolve PDB chains for which no annotated link is available. Finally the sequences from PDB and UniProtKB are aligned to obtain a residue-level mapping. The resource may be queried interactively or downloaded from http://www.bioinf.org.uk/pdbsws/.

  15. Global geologic map of Ganymede

    USGS Publications Warehouse

    Collins, Geoffrey C.; Patterson, G. Wesley; Head, James W.; Pappalardo, Robert T.; Prockter, Louise M.; Lucchitta, Baerbel K.; Kay, Johnathan P.

    2014-01-01

    Ganymede is the largest satellite of Jupiter, and its icy surface has been formed through a variety of impact cratering, tectonic, and possibly cryovolcanic processes. The history of Ganymede can be divided into three distinct phases: an early phase dominated by impact cratering and mixing of non-ice materials in the icy crust, a phase in the middle of its history marked by great tectonic upheaval, and a late quiescent phase characterized by a gradual drop in heat flow and further impact cratering. Images of Ganymede suitable for geologic mapping were collected during the flybys of Voyager 1 and Voyager 2 (1979), as well as during the Galileo Mission in orbit around Jupiter (1995–2003). This map represents a synthesis of our understanding of Ganymede geology after the conclusion of the Galileo Mission. We summarize the properties of the imaging dataset used to construct the map, previously published maps of Ganymede, our own mapping rationale, and the geologic history of Ganymede. Additional details on these topics, along with detailed descriptions of the type localities for the material units, may be found in the companion paper to this map (Patterson and others, 2010).

  16. Comparative Maps & Dashboards Home | ECHO | US EPA

    EPA Pesticide Factsheets

    Comparative Maps and Dashboards focus on environmental compliance and enforcement trends at a state and national level. Comparative maps provide a quick cross-country look at key environmental compliance and enforcement indicators. The maps link to dashboards that provide details by state/territory.

  17. State Comparative Maps Help | ECHO | US EPA

    EPA Pesticide Factsheets

    Comparative Maps in ECHO focus on environmental compliance and enforcement trends at a state and national level. Comparative maps provide a quick cross-country look at key environmental compliance and enforcement indicators. The maps link to dashboards that provide details by state/territory.

  18. Mapping the Llano Estacado

    USDA-ARS?s Scientific Manuscript database

    Early maps of North America, prepared in the 18th and early 19th centuries, often depicted the Llano Estacado as a conspicuous blank spot - a terra incognita. A good example is a map of the southwest sketched by Alexander von Humboldt in 1804. In 1830, Stephen F. Austin added little detail to the ...

  19. Geomorphological map of glaciated gorges in a granitic massif (Gredos range, Central Spain).

    NASA Astrophysics Data System (ADS)

    Campos, Néstor; Tanarro, Luis Miguel; Palacios, David

    2017-04-01

    A detailed geomorphological map on a 1:10,000 scale is presented for a high mountain area in Gredos range (Iberian Central System), this area is located in a granitic massif 160 km West of Madrid and comprises three gorges : La Vega, Taheña-Honda and La Nava. Only few detailed geomorphological maps of the Gredos range are available despite the wide diversity of landforms, in order to improve the understanding of this zone, this geomorphological map of the area has been produced, showing in detail the geomorphologic diversity of these gorges. The map was created with the aid of 25 cm resolution aerial photographs, 25 cm resolution satellite images, Iberpix 3D images provided by the Spanish National Geographic Institute and verified with field work. The landforms were delimitated with a stereoscope and satellite image pairs and digitized using GIS and CAD software, in some areas 3D glasses has been used with 3D images and the software Esri ArcScene. The landforms resulting from interpretation of aerial photographs and satellite images were classified using the IGUL (Institute of Geography, University of Lausanne) legend system (developed at the end of the 1980s) combined with the legend proposed by Peña et al. (1997) and some personal adaptations. The map legend includes 45 landforms divided into seven sections: structural, hydrography, fluvial, gravitative, glacial, nival and anthropic landforms. The use of both legend systems allows us to represent the landform types distributed over an area of 40 km2 and to identify the geomorphic processes involved in their morphogenesis, this variety of processes and landforms identified demonstrated that geomorphological cartography obtained by combining traditional image interpretation and GIS technology facilitates the production of geomorphological maps and the obtaining of valuable data for identify and understand surface processes and landforms. References: Maillard, B., Lambiel, C., Martin, S., Pellitero, R., Reynard, E

  20. Maps of heavy metals in the soils of the European Union and proposed priority areas for detailed assessment.

    PubMed

    Tóth, Gergely; Hermann, Tamás; Szatmári, Gábor; Pásztor, László

    2016-09-15

    Soil contamination is one of the greatest concerns among the threats to soil resources in Europe and globally. Despite of its importance there was only very course scale (1/5000km(2)) data available on soil heavy metal concentrations prior to the LUCAS topsoil survey, which had a sampling density of 200km(2). Based on the results of the LUCAS sampling and auxiliary information detailed and up-to-date maps of heavy metals (As, Cd, Cr, Cu, Hg, Pb, Zn, Sb, Co and Ni) in the topsoil of the European Union were produced. Using the maps of heavy metal concentration in topsoil we made a spatial prediction of areas where local assessment is suggested to monitor and eventually control the potential threat from heavy metals. Most of the examined elements remain under the corresponding threshold values in the majority of the land of the EU. However, one or more of the elements exceed the applied threshold concentration on 1.2Mkm(2), which is 28.3% of the total surface area of the EU. While natural backgrounds might be the reason for high concentrations on large proportion of the affected soils, historical and recent industrial and mining areas show elevated concentrations (predominantly of As, Cd, Pb and Hg) too, indicating the magnitude of anthropogenic effect on soil quality in Europe. Copyright © 2016 The Authors. Published by Elsevier B.V. All rights reserved.

  1. Mars Structural and Stratigraphic Mapping along the Coprates Rise

    NASA Technical Reports Server (NTRS)

    Saunders, R Stephen

    2009-01-01

    This geologic mapping project supports a topical study of structures in east Thaumasia associated with the Coprates rise. The study examines cuesta-like features on the east flank of the Coprates rise first identified by Saunders et al. [1]. Mapping combines detailed local stratigraphy, structural geology and topography. Hogbacks and cuestas indicate erosion of tilted rock units. The extent of the erosion will be determined in the course of the mapping. The region of interest lies along the eastern margin of Thaumasia bounded by latitudes -15 and -35 and longitudes 50 to 70 W (Figure 1). Three MTM geologic quadrangles are being compiled for publication by the USGS (-20057, -25057, -30057). All existing data sources are used including THEMIS, MOC, CTX, HiRISE, MOLA and gravity, as well as higher level data available through the PDS data nodes at ASU, UA and Washington University. The extremely valuable ASU JMARS tools are used for analysis of many of the data sets. ArcGIS software has been obtained and is being learned for the map compilation.

  2. High-resolution topography along surface rupture of the 16 October 1999 Hector Mine, California (Mw 7.1) from airborne laser swath mapping

    USGS Publications Warehouse

    Hudnutt, K.W.; Borsa, A.; Glennie, C.; Minster, J.-B.

    2002-01-01

    In order to document surface rupture associated with the Hector Mine earthquake, in particular, the area of maximum slip and the deformed surface of Lavic Lake playa, we acquired high-resolution data using relatively new topographic-mapping methods. We performed a raster-laser scan of the main surface breaks along the entire rupture zone, as well as along an unruptured portion of the Bullion fault. The image of the ground surface produced by this method is highly detailed, comparable to that obtained when geologists make particularly detailed site maps for geomorphic or paleoseismic studies. In this case, however, for the first time after a surface-rupturing earthquake, the detailed mapping is along the entire fault zone rather than being confined to selected sites. These data are geodetically referenced, using the Global Positioning System, thus enabling more accurate mapping of the rupture traces. In addition, digital photographs taken along the same flight lines can be overlaid onto the precise topographic data, improving terrain visualization. We demonstrate the potential of these techniques for measuring fault-slip vectors.

  3. Physical and genetic map of Streptococcus thermophilus A054.

    PubMed Central

    Roussel, Y; Pebay, M; Guedon, G; Simonet, J M; Decaris, B

    1994-01-01

    The three restriction endonucleases SfiI, BssHII, and SmaI were found to generate fragments with suitable size distributions for mapping the genome of Streptococcus thermophilus A054. A total of 5, 8, and 24 fragments were produced with SfiI, BssHII, and SmaI, respectively. An average genome size of 1,824 kb was determined by summing the total fragment sizes obtained by digestions with these three enzymes. Partial and multiple digestions of genomic DNA in conjunction with Southern hybridization were used to map SfiI, BssHII, and SmaI fragments. All restriction fragments were arranged in a unique circular chromosome. Southern hybridization analysis with specific probes allowed 23 genetic markers to be located on the restriction map. Among them, six rrn loci were precisely located. The area of the chromosome containing the ribosomal operons was further detailed by mapping some of the ApaI and SgrAI sites. Comparison of macrorestriction patterns from three clones derived from strain A054 revealed two variable regions in the chromosome. One was associated with the tandem rrnD and rrnE loci, and the other was mapped in the region of the lactose operon. Images PMID:8002562

  4. Mapping the True 3D Morphology of Deep-Sea Canyons

    NASA Astrophysics Data System (ADS)

    Huvenne, V. A.; Masson, D.; Tyler, P. A.; Huehnerbach, V.

    2010-12-01

    The importance of submarine canyons as ecosystem hotspots and sediment transport pathways has been recognised for decades (e.g. Heezen et al., 1955; Vetter & Dayton, 1998). However, studying canyon systems in detail is a challenge, because of the complexity and steepness of the terrain. Acoustic surveys are hampered by side-echoes, while the high slope angles cause most types of sampling equipment, deployed from surface vessels, to fail. Ship-borne bathymetric surveys tend to represent the canyon topography in an overly smoothed way as a result of their limited resolution in deep water compared to the scale of the terrain variability. Moreover, it is clear that overhanging cliffs cannot be mapped correctly with traditional, downward looking multibeam echosounders. The increasing availability of underwater vehicles, however, opens new opportunities. During summer 2009, we mapped several submarine canyon habitats in detail, using the UK deep-water Remotely Operated Vehicle (ROV) ISIS. In particular, we developed a new methodology to map vertical cliffs and overhangs by placing the high-resolution Simrad SM2000 multibeam system of the ROV in a forward-looking position rather than in the traditional downward-looking configuration. The cliff morphology was then mapped by moving the ROV laterally in parallel passes at different depths. Repeating this approach at different distances from the cliff face, we obtained maps of varying resolution and extent. The low resolution maps provide an overview of the general geological framework, while individual strata and faunal colonies can be recognised on the highest resolution maps. Using point-cloud models, we combined the ship-borne bathymetry with the ROV-based data, in order to obtain a true 3D seabed morphology of the canyon study site, which can be used for fly-throughs, geomorphological analysis or habitat mapping. With this approach, we could visualise the spatial structure and density distribution of a unique and

  5. Downscaling NASA Climatological Data to Produce Detailed Climate Zone Maps

    NASA Technical Reports Server (NTRS)

    Chandler, William S.; Hoell, James M.; Westberg, David J.; Whitlock, Charles H.; Zhang, Taiping; Stackhouse, P. W.

    2011-01-01

    The design of energy efficient sustainable buildings is heavily dependent on accurate long-term and near real-time local weather data. To varying degrees the current meteorological networks over the globe have been used to provide these data albeit often from sites far removed from the desired location. The national need is for access to weather and solar resource data accurate enough to use to develop preliminary building designs within a short proposal time limit, usually within 60 days. The NASA Prediction Of Worldwide Energy Resource (POWER) project was established by NASA to provide industry friendly access to globally distributed solar and meteorological data. As a result, the POWER web site (power.larc.nasa.gov) now provides global information on many renewable energy parameters and several buildings-related items but at a relatively coarse resolution. This paper describes a method of downscaling NASA atmospheric assimilation model results to higher resolution and maps those parameters to produce building climate zone maps using estimates of temperature and precipitation. The distribution of climate zones for North America with an emphasis on the Pacific Northwest for just one year shows very good correspondence to the currently defined distribution. The method has the potential to provide a consistent procedure for deriving climate zone information on a global basis that can be assessed for variability and updated more regularly.

  6. Multisensor on-the-go mapping of readily dispersible clay, particle size and soil organic matter

    NASA Astrophysics Data System (ADS)

    Debaene, Guillaume; Niedźwiecki, Jacek; Papierowska, Ewa

    2016-04-01

    Particle size fractions affect strongly the physical and chemical properties of soil. Readily dispersible clay (RDC) is the part of the clay fraction in soils that is easily or potentially dispersible in water when small amounts of mechanical energy are applied to soil. The amount of RDC in the soil is of significant importance for agriculture and environment because clay dispersion is a cause of poor soil stability in water which in turn contributes to soil erodibility, mud flows, and cementation. To obtain a detailed map of soil texture, many samples are needed. Moreover, RDC determination is time consuming. The use of a mobile visible and near-infrared (VIS-NIR) platform is proposed here to map those soil properties and obtain the first detailed map of RDC at field level. Soil properties prediction was based on calibration model developed with 10 representative samples selected by a fuzzy logic algorithm. Calibration samples were analysed for soil texture (clay, silt and sand), RDC and soil organic carbon (SOC) using conventional wet chemistry analysis. Moreover, the Veris mobile sensor platform is also collecting electrical conductivity (EC) data (deep and shallow), and soil temperature. These auxiliary data were combined with VIS-NIR measurement (data fusion) to improve prediction results. EC maps were also produced to help understanding RDC data. The resulting maps were visually compared with an orthophotography of the field taken at the beginning of the plant growing season. Models were developed with partial least square regression (PLSR) and support vector machine regression (SVMR). There were no significant differences between calibration using PLSR or SVMR. Nevertheless, the best models were obtained with PLSR and standard normal variate (SNV) pretreatment and the fusion with deep EC data (e.g. for RDC and clay content: RMSECV = 0,35% and R2 = 0,71; RMSECV = 0,32% and R2 = 0,73 respectively). The best models were used to predict soil properties from the

  7. High-Resolution AUV Mapping Reveals Structural Details of Submarine Inflated Lava Flows

    NASA Astrophysics Data System (ADS)

    Paduan, J.; Clague, D. A.; Caress, D. W.; Thomas, H.; Thompson, D.; Conlin, D.

    2009-12-01

    The MBARI mapping AUV D. Allan B. has now been used to map volcanic terrain at mid-ocean ridges, back-arc spreading centers, and seamounts. These include the summit caldera and upper south rift zone at Axial Volcano, the summit of Davidson Seamount, the Endeavour hydrothermal fields, the Northeast Lau Spreading Center and West Mata Volcano, and, most recently, the CoAxial, North Cleft and North Gorda historic eruption sites on the Juan de Fuca and Gorda Ridges. ROV and submersible dives at most of these sites have provided groundtruth for the textures and features revealed in the roughly 1-m resolution maps. A prominent feature in the maps from four of the sites are inflated flows that did not deflate or drain. These resemble subaerial tumuli but differ in being located on level terrain, apparently atop or very near eruptive vents instead of being in the distal portions of flows. The largest inflated flow at Axial Volcano is on the caldera floor. The main part is 500 by 300 m, and up to 30 m high, with a lobe that extends another 750 m in a sinuous path. It and two nearby, medium-sized inflated flows were first described from sidescan imagery and a submersible dive by Appelgate and Embley (Bull. Volcanol., 54, 447-458, 1992). The AUV maps show clearly the smooth, gently domed relief of the large inflated flow and its sinuous shape on the seafloor, the medium-sized nearby inflated flows, and several additional smaller ones. Particularly striking is a network of 4 to 10 m deep cracks along the crest of each inflation. The cracks occur 30 to 50 m from the margins on all sides of the wider parts of the inflated flows, and become medial cracks along the entire length of the narrow parts, which are nearly triangular in cross-section. An inflation pit 35 m in diameter has a depth equal to the surrounding lava fields. ROV Doc Ricketts dove on these flows in August 2009 and photographed the deeply cracked, uplifted, once flat-lying lineated and ropy sheet flows that form

  8. Recalculation of regional and detailed gravity database from Slovak Republic and qualitative interpretation of new generation Bouguer anomaly map

    NASA Astrophysics Data System (ADS)

    Pasteka, Roman; Zahorec, Pavol; Mikuska, Jan; Szalaiova, Viktoria; Papco, Juraj; Krajnak, Martin; Kusnirak, David; Panisova, Jaroslava; Vajda, Peter; Bielik, Miroslav

    2014-05-01

    In this contribution results of the running project "Bouguer anomalies of new generation and the gravimetrical model of Western Carpathians (APVV-0194-10)" are presented. The existing homogenized regional database (212478 points) was enlarged by approximately 107 500 archive detailed gravity measurements. These added gravity values were measured since the year 1976 to the present, therefore they need to be unified and reprocessed. The improved positions of more than 8500 measured points were acquired by digitizing of archive maps (we recognized some local errors within particular data sets). Besides the local errors (due to the wrong positions, heights or gravity of measured points) we have found some areas of systematic errors probably due to the gravity measurement or processing errors. Some of them were confirmed and consequently corrected by field measurements within the frame of current project. Special attention is paid to the recalculation of the terrain corrections - we have used a new developed software as well as the latest version of digital terrain model of Slovakia DMR-3. Main improvement of the new terrain corrections evaluation algorithm is the possibility to calculate it in the real gravimeter position and involving of 3D polyhedral bodies approximation (accepting the spherical approximation of Earth's curvature). We have realized several tests by means of the introduction of non-standard distant relief effects introduction. A new complete Bouguer anomalies map was constructed and transformed by means of higher derivatives operators (tilt derivatives, TDX, theta-derivatives and the new TDXAS transformation), using the regularization approach. A new interesting regional lineament of probably neotectonic character was recognized in the new map of complete Bouguer anomalies and it was confirmed also by realized in-situ field measurements.

  9. Map Separates

    USGS Publications Warehouse

    ,

    2001-01-01

    U.S. Geological Survey (USGS) topographic maps are printed using up to six colors (black, blue, green, red, brown, and purple). To prepare your own maps or artwork based on maps, you can order separate black-and-white film positives or negatives for any color printed on a USGS topographic map, or for one or more of the groups of related features printed in the same color on the map (such as drainage and drainage names from the blue plate.) In this document, examples are shown with appropriate ink color to illustrate the various separates. When purchased, separates are black-and-white film negatives or positives. After you receive a film separate or composite from the USGS, you can crop, enlarge or reduce, and edit to add or remove details to suit your special needs. For example, you can adapt the separates for making regional and local planning maps or for doing many kinds of studies or promotions by using the features you select and then printing them in colors of your choice.

  10. Interpreting fMRI data: maps, modules and dimensions

    PubMed Central

    Op de Beeck, Hans P.; Haushofer, Johannes; Kanwisher, Nancy G.

    2009-01-01

    Neuroimaging research over the past decade has revealed a detailed picture of the functional organization of the human brain. Here we focus on two fundamental questions that are raised by the detailed mapping of sensory and cognitive functions and illustrate these questions with findings from the object-vision pathway. First, are functionally specific regions that are located close together best understood as distinct cortical modules or as parts of a larger-scale cortical map? Second, what functional properties define each cortical map or module? We propose a model in which overlapping continuous maps of simple features give rise to discrete modules that are selective for complex stimuli. PMID:18200027

  11. Mapping the band structure of a surface phononic crystal

    NASA Astrophysics Data System (ADS)

    Maznev, A. A.; Wright, O. B.; Matsuda, O.

    2011-01-01

    We map the band structure of surface acoustic modes of a periodic array of copper lines embedded in a SiO2 film on a silicon substrate by means of the laser-induced transient grating technique. A detailed map of the lowest sheet of the ω(k) surface and partial maps of two higher-order sheets are obtained. We discuss the topology of the ω(k) surface and explain how it arises from the Rayleigh and Sezawa modes of the film/substrate system. In the vicinity of the bandgap formed at the Brillouin zone boundary, the first and second dispersion sheets take the form of a saddle and a bowl, respectively, in agreement with a weak perturbation model. The shape of the third dispersion sheet, however, appears to defy expectations based on the perturbation approach. In particular, it contains minima located off the symmetry directions, which implies the existence of zero group velocity modes with an obliquely directed wavevector.

  12. High resolution optical DNA mapping

    NASA Astrophysics Data System (ADS)

    Baday, Murat

    Many types of diseases including cancer and autism are associated with copy-number variations in the genome. Most of these variations could not be identified with existing sequencing and optical DNA mapping methods. We have developed Multi-color Super-resolution technique, with potential for high throughput and low cost, which can allow us to recognize more of these variations. Our technique has made 10--fold improvement in the resolution of optical DNA mapping. Using a 180 kb BAC clone as a model system, we resolved dense patterns from 108 fluorescent labels of two different colors representing two different sequence-motifs. Overall, a detailed DNA map with 100 bp resolution was achieved, which has the potential to reveal detailed information about genetic variance and to facilitate medical diagnosis of genetic disease.

  13. Mapping Venus: Modeling the Magellan Mission.

    ERIC Educational Resources Information Center

    Richardson, Doug

    1997-01-01

    Provides details of an activity designed to help students understand the relationship between astronomy and geology. Applies concepts of space research and map-making technology to the construction of a topographic map of a simulated section of Venus. (DDR)

  14. Fabrication of glass gas cells for the HALOE and MAPS satellite experiments

    NASA Technical Reports Server (NTRS)

    Sullivan, E. M.; Walthall, H. G.

    1984-01-01

    The Halogen Occultation Experiment (HALOE) and the Measurement of Air Pollution from Satellites (MAPS) experiment are satellite-borne experiments which measure trace constituents in the Earth's atmosphere. The instruments which obtain the data for these experiments are based on the gas filter correlation radiometer measurement technique. In this technique, small samples of the gases of interest are encapsulated in glass cylinders, called gas cells, which act as very selective optical filters. This report describes the techniques employed in the fabrication of the gas cells for the HALOE and MAPS instruments. Details of the method used to fuse the sapphire windows (required for IR transmission) to the glass cell bodies are presented along with detailed descriptions of the jigs and fixtures used during the assembly process. The techniques and equipment used for window inspection and for pairing the HALOE windows are discussed. Cell body materials and the steps involved in preparing the cell bodies for the glass-to-sapphire fusion process are given.

  15. Mapping forest canopy gaps using air-photo interpretation and ground surveys

    USGS Publications Warehouse

    Fox, T.J.; Knutson, M.G.; Hines, R.K.

    2000-01-01

    Canopy gaps are important structural components of forested habitats for many wildlife species. Recent improvements in the spatial accuracy of geographic information system tools facilitate accurate mapping of small canopy features such as gaps. We compared canopy-gap maps generated using ground survey methods with those derived from air-photo interpretation. We found that maps created from high-resolution air photos were more accurate than those created from ground surveys. Errors of omission were 25.6% for the ground-survey method and 4.7% for the air-photo method. One variable of inter est in songbird research is the distance from nests to gap edges. Distances from real and simulated nests to gap edges were longer using the ground-survey maps versus the air-photo maps, indicating that gap omission could potentially bias the assessment of spatial relationships. If research or management goals require location and size of canopy gaps and specific information about vegetation structure, we recommend a 2-fold approach. First, canopy gaps can be located and the perimeters defined using 1:15,000-scale or larger aerial photographs and the methods we describe. Mapped gaps can then be field-surveyed to obtain detailed vegetation data.

  16. Wind Maps | Geospatial Data Science | NREL

    Science.gov Websites

    Wind Maps Wind Maps Wind Prospector This GIS application supports resource assessment and data exploration for wind development. This collection of wind maps and assessments details the wind resource in Geospatial Data Science Team. National Wind Resource Assessment The national wind resource assessment was

  17. To select the best tool for generating 3D maintenance data and to set the detailed process for obtaining the 3D maintenance data

    NASA Astrophysics Data System (ADS)

    Prashanth, B. N.; Roy, Kingshuk

    2017-07-01

    Three Dimensional (3D) maintenance data provides a link between design and technical documentation creating interactive 3D graphical training and maintenance material. It becomes difficult for an operator to always go through huge paper manuals or come running to the computer for doing maintenance of a machine which makes the maintenance work fatigue. Above being the case, a 3D animation makes maintenance work very simple since, there is no language barrier. The research deals with the generation of 3D maintenance data of any given machine. The best tool for obtaining the 3D maintenance is selected and the tool is analyzed. Using the same tool, a detailed process for extracting the 3D maintenance data for any machine is set. This project aims at selecting the best tool for obtaining 3D maintenance data and to select the detailed process for obtaining 3D maintenance data. 3D maintenance reduces use of big volumes of manuals which creates human errors and makes the work of an operator fatiguing. Hence 3-D maintenance would help in training and maintenance and would increase productivity. 3Dvia when compared with Cortona 3D and Deep Exploration proves to be better than them. 3Dvia is good in data translation and it has the best renderings compared to the other two 3D maintenance software. 3Dvia is very user friendly and it has various options for creating 3D animations. Its Interactive Electronic Technical Publication (IETP) integration is also better than the other two software. Hence 3Dvia proves to be the best software for obtaining 3D maintenance data of any machine.

  18. Importance of MAP Kinases during Protoperithecial Morphogenesis in Neurospora crassa

    PubMed Central

    Jeffree, Chris E.; Oborny, Radek; Boonyarungsrit, Patid; Read, Nick D.

    2012-01-01

    In order to produce multicellular structures filamentous fungi combine various morphogenetic programs that are fundamentally different from those used by plants and animals. The perithecium, the female sexual fruitbody of Neurospora crassa, differentiates from the vegetative mycelium in distinct morphological stages, and represents one of the more complex multicellular structures produced by fungi. In this study we defined the stages of protoperithecial morphogenesis in the N. crassa wild type in greater detail than has previously been described; compared protoperithecial morphogenesis in gene-deletion mutants of all nine mitogen-activated protein (MAP) kinases conserved in N. crassa; confirmed that all three MAP kinase cascades are required for sexual development; and showed that the three different cascades each have distinctly different functions during this process. However, only MAP kinases equivalent to the budding yeast pheromone response and cell wall integrity pathways, but not the osmoregulatory pathway, were essential for vegetative cell fusion. Evidence was obtained for MAP kinase signaling cascades performing roles in extracellular matrix deposition, hyphal adhesion, and envelopment during the construction of fertilizable protoperithecia. PMID:22900028

  19. Map Projections: Approaches and Themes

    ERIC Educational Resources Information Center

    Steward, H. J.

    1970-01-01

    Map projections take on new meaning with location systems needed for satellites, other planets and space. A classroom approach deals first with the relationship between the earth and the globe, then with transformations to flat maps. Problems of preserving geometric qualities: distance, angles, directions are dealt with in some detail as are…

  20. Infants Encode Phonetic Detail during Cross-Situational Word Learning

    PubMed Central

    Escudero, Paola; Mulak, Karen E.; Vlach, Haley A.

    2016-01-01

    Infants often hear new words in the context of more than one candidate referent. In cross-situational word learning (XSWL), word-object mappings are determined by tracking co-occurrences of words and candidate referents across multiple learning events. Research demonstrates that infants can learn words in XSWL paradigms, suggesting that it is a viable model of real-world word learning. However, these studies have all presented infants with words that have no or minimal phonological overlap (e.g., BLICKET and GAX). Words often contain some degree of phonological overlap, and it is unknown whether infants can simultaneously encode fine phonological detail while learning words via XSWL. We tested 12-, 15-, 17-, and 20-month-olds’ XSWL of eight words that, when paired, formed non-minimal pairs (MPs; e.g., BON–DEET) or MPs (e.g., BON–TON, DEET–DIT). The results demonstrated that infants are able to learn word-object mappings and encode them with sufficient phonetic detail as to identify words in both non-minimal and MP contexts. Thus, this work suggests that infants are able to simultaneously discriminate phonetic differences between words and map words to referents in an implicit learning paradigm such as XSWL. PMID:27708605

  1. A new detailed map of total phosphorus stocks in Australian soil.

    PubMed

    Viscarra Rossel, Raphael A; Bui, Elisabeth N

    2016-01-15

    Accurate data are needed to effectively monitor environmental condition, and develop sound policies to plan for the future. Globally, current estimates of soil total phosphorus (P) stocks are very uncertain because they are derived from sparse data, with large gaps over many areas of the Earth. Here, we derive spatially explicit estimates, and their uncertainty, of the distribution and stock of total P in Australian soil. Data from several sources were harmonized to produce the most comprehensive inventory of total P in soil of the continent. They were used to produce fine spatial resolution continental maps of total P in six depth layers by combining the bootstrap, a decision tree with piecewise regression on environmental variables and geostatistical modelling of residuals. Values of percent total P were predicted at the nodes of a 3-arcsecond (approximately 90 m) grid and mapped together with their uncertainties. We combined these predictions with those for bulk density and mapped the total soil P stock in the 0-30 cm layer over the whole of Australia. The average amount of P in Australian topsoil is estimated to be 0.98 t ha(-1) with 90% confidence limits of 0.2 and 4.2 t ha(-1). The total stock of P in the 0-30 cm layer of soil for the continent is 0.91 Gt with 90% confidence limits of 0.19 and 3.9 Gt. The estimates are the most reliable approximation of the stock of total P in Australian soil to date. They could help improve ecological models, guide the formulation of policy around food and water security, biodiversity and conservation, inform future sampling for inventory, guide the design of monitoring networks, and provide a benchmark against which to assess the impact of changes in land cover, land use and management and climate on soil P stocks and water quality in Australia. Crown Copyright © 2015. Published by Elsevier B.V. All rights reserved.

  2. Stochastic thermodynamics of quantum maps with and without equilibrium.

    PubMed

    Barra, Felipe; Lledó, Cristóbal

    2017-11-01

    We study stochastic thermodynamics for a quantum system of interest whose dynamics is described by a completely positive trace-preserving (CPTP) map as a result of its interaction with a thermal bath. We define CPTP maps with equilibrium as CPTP maps with an invariant state such that the entropy production due to the action of the map on the invariant state vanishes. Thermal maps are a subgroup of CPTP maps with equilibrium. In general, for CPTP maps, the thermodynamic quantities, such as the entropy production or work performed on the system, depend on the combined state of the system plus its environment. We show that these quantities can be written in terms of system properties for maps with equilibrium. The relations that we obtain are valid for arbitrary coupling strengths between the system and the thermal bath. The fluctuations of thermodynamic quantities are considered in the framework of a two-point measurement scheme. We derive the entropy production fluctuation theorem for general maps and a fluctuation relation for the stochastic work on a system that starts in the Gibbs state. Some simplifications for the probability distributions in the case of maps with equilibrium are presented. We illustrate our results by considering spin 1/2 systems under thermal maps, nonthermal maps with equilibrium, maps with nonequilibrium steady states, and concatenations of them. Finally, and as an important application, we consider a particular limit in which the concatenation of maps generates a continuous time evolution in Lindblad form for the system of interest, and we show that the concept of maps with and without equilibrium translates into Lindblad equations with and without quantum detailed balance, respectively. The consequences for the thermodynamic quantities in this limit are discussed.

  3. Stochastic thermodynamics of quantum maps with and without equilibrium

    NASA Astrophysics Data System (ADS)

    Barra, Felipe; Lledó, Cristóbal

    2017-11-01

    We study stochastic thermodynamics for a quantum system of interest whose dynamics is described by a completely positive trace-preserving (CPTP) map as a result of its interaction with a thermal bath. We define CPTP maps with equilibrium as CPTP maps with an invariant state such that the entropy production due to the action of the map on the invariant state vanishes. Thermal maps are a subgroup of CPTP maps with equilibrium. In general, for CPTP maps, the thermodynamic quantities, such as the entropy production or work performed on the system, depend on the combined state of the system plus its environment. We show that these quantities can be written in terms of system properties for maps with equilibrium. The relations that we obtain are valid for arbitrary coupling strengths between the system and the thermal bath. The fluctuations of thermodynamic quantities are considered in the framework of a two-point measurement scheme. We derive the entropy production fluctuation theorem for general maps and a fluctuation relation for the stochastic work on a system that starts in the Gibbs state. Some simplifications for the probability distributions in the case of maps with equilibrium are presented. We illustrate our results by considering spin 1/2 systems under thermal maps, nonthermal maps with equilibrium, maps with nonequilibrium steady states, and concatenations of them. Finally, and as an important application, we consider a particular limit in which the concatenation of maps generates a continuous time evolution in Lindblad form for the system of interest, and we show that the concept of maps with and without equilibrium translates into Lindblad equations with and without quantum detailed balance, respectively. The consequences for the thermodynamic quantities in this limit are discussed.

  4. Detailed ocean current maps may lie over the horizon

    NASA Astrophysics Data System (ADS)

    Carlowicz, Michael

    In another case of military swords being turned into scientific plowshares, two American researchers have used radar systems once designed to detect Soviet planes during the Cold War to map open-ocean currents instead.In the name of science, Thomas Georges and Jack Harlan of NOAA's Environmental Technology Laboratory borrowed some time last summer on the U.S. Navy's over-the-horizon (OTH) radar systems in both Virginia and Texas. Training the radars on the waters off of the southern coast of Florida, the researchers gathered enough data to deduce the surface motion of two 70,000 km2 swatches of the Caribbean Sea and Gulf of Mexico. By bouncing 5-28 MHz radio waves off the ionosphere down to the sea surface and back, the researchers were able to derive the characteristics of the ocean surface from Bragg backscatter resonance.

  5. Functional Maps of Neocortical Local Circuitry

    PubMed Central

    Thomson, Alex M.; Lamy, Christophe

    2007-01-01

    This review aims to summarize data obtained with different techniques to provide a functional map of the local circuit connections made by neocortical neurones, a reference for those interested in cortical circuitry and the numerical information required by those wishing to model the circuit. A brief description of the main techniques used to study circuitry is followed by outline descriptions of the major classes of neocortical excitatory and inhibitory neurones and the connections that each layer makes with other cortical and subcortical regions. Maps summarizing the projection patterns of each class of neurone within the local circuit and tables of the properties of these local circuit connections are provided. This review relies primarily on anatomical studies that have identified the classes of neurones and their local and long distance connections and on paired intracellular and whole-cell recordings which have documented the properties of the connections between them. A large number of different types of synaptic connections have been described, but for some there are only a few published examples and for others the details that can only be obtained with paired recordings and dye-filling are lacking. A further complication is provided by the range of species, technical approaches and age groups used in these studies. Wherever possible the range of available data are summarised and compared. To fill some of the more obvious gaps for the less well-documented cases, data obtained with other methods are also summarized. PMID:18982117

  6. Detailed seafloor habitat mapping to enhance marine-resource management

    USGS Publications Warehouse

    Zawada, David G.; Hart, Kristen M.

    2010-01-01

    Pictures of the seafloor capture important information about the sediments, exposed geologic features, submerged aquatic vegetation, and animals found in a given habitat. With the emergence of marine protected areas (MPAs) as a favored tactic for preserving coral reef resources, knowledge of essential habitat components is paramount to designing effective management strategies. Surprisingly, detailed information on seafloor habitat components is not available in many areas that are being considered for MPA designation or that are already designated as MPAs. A task of the U.S. Geological Survey Coral Reef Ecosystem STudies (USGS CREST) project is addressing this issue.

  7. Exact period-four solutions of a family of n-dimensional quadratic maps via harmonic balance and Gröbner bases.

    PubMed

    D'Amico, María Belén; Calandrini, Guillermo L

    2015-11-01

    Analytical solutions of the period-four orbits exhibited by a classical family of n-dimensional quadratic maps are presented. Exact expressions are obtained by applying harmonic balance and Gröbner bases to a single-input single-output representation of the system. A detailed study of a generalized scalar quadratic map and a well-known delayed logistic model is included for illustration. In the former example, conditions for the existence of bistability phenomenon are also introduced.

  8. Exact period-four solutions of a family of n-dimensional quadratic maps via harmonic balance and Gröbner bases

    NASA Astrophysics Data System (ADS)

    D'Amico, María Belén; Calandrini, Guillermo L.

    2015-11-01

    Analytical solutions of the period-four orbits exhibited by a classical family of n-dimensional quadratic maps are presented. Exact expressions are obtained by applying harmonic balance and Gröbner bases to a single-input single-output representation of the system. A detailed study of a generalized scalar quadratic map and a well-known delayed logistic model is included for illustration. In the former example, conditions for the existence of bistability phenomenon are also introduced.

  9. Map scale effects on estimating the number of undiscovered mineral deposits

    USGS Publications Warehouse

    Singer, D.A.; Menzie, W.D.

    2008-01-01

    Estimates of numbers of undiscovered mineral deposits, fundamental to assessing mineral resources, are affected by map scale. Where consistently defined deposits of a particular type are estimated, spatial and frequency distributions of deposits are linked in that some frequency distributions can be generated by processes randomly in space whereas others are generated by processes suggesting clustering in space. Possible spatial distributions of mineral deposits and their related frequency distributions are affected by map scale and associated inclusions of non-permissive or covered geological settings. More generalized map scales are more likely to cause inclusion of geologic settings that are not really permissive for the deposit type, or that include unreported cover over permissive areas, resulting in the appearance of deposit clustering. Thus, overly generalized map scales can cause deposits to appear clustered. We propose a model that captures the effects of map scale and the related inclusion of non-permissive geologic settings on numbers of deposits estimates, the zero-inflated Poisson distribution. Effects of map scale as represented by the zero-inflated Poisson distribution suggest that the appearance of deposit clustering should diminish as mapping becomes more detailed because the number of inflated zeros would decrease with more detailed maps. Based on observed worldwide relationships between map scale and areas permissive for deposit types, mapping at a scale with twice the detail should cut permissive area size of a porphyry copper tract to 29% and a volcanic-hosted massive sulfide tract to 50% of their original sizes. Thus some direct benefits of mapping an area at a more detailed scale are indicated by significant reductions in areas permissive for deposit types, increased deposit density and, as a consequence, reduced uncertainty in the estimate of number of undiscovered deposits. Exploration enterprises benefit from reduced areas requiring

  10. 3D maps of the local interstellar medium: the impact of Gaia

    NASA Astrophysics Data System (ADS)

    Capitanio, L.; Lallement, R.; Vergely, J. L.; Elyajouri, M.; Babusiaux, C.; Ruiz-Dern, L.; Monreal-Ibero, A.; Arenou, F.; Danielski, C.

    2017-12-01

    Gaia parallaxes combined with colour excess and absorption measurements from large stellar surveys will allow building increasingly precise three-dimensional maps of the interstellar matter (ISM). Reciprocally, detailed maps of the ISM will allow improving photometric calibrations of Gaia and measuring more precisely the amounts of reddening. In the future, the extraction of a diffuse interstellar band (DIB) from Gaia RVS (Radial Velocity Spectrometer) spectra will allow to build a tomography of the carrier of this DIB and compare it with dust and gas distributions. Here we show several results that illustrate current progress in local ISM mapping and a first example of the stellar-interstellar synergy linked to Gaia: a) how Gaia-DR1 parallaxes already modify the ISM maps obtained by means of a full-3D inversion of a compilation of colour excess data, b) how DIB measurements and corresponding Gaia parallaxes can complement colour excess data and improve the maps, c) new hierarchical methods combining distinct surveys, d) improved maps including APOGEE colour excess estimates deduced from the recent Gaia-based photometric calibrations of Ruiz-Dern et al (this issue), e) additional inclusion of LAMOST colour excess estimates (Wang et al, 2016).

  11. Enhanced RGB-D Mapping Method for Detailed 3D Indoor and Outdoor Modeling

    PubMed Central

    Tang, Shengjun; Zhu, Qing; Chen, Wu; Darwish, Walid; Wu, Bo; Hu, Han; Chen, Min

    2016-01-01

    RGB-D sensors (sensors with RGB camera and Depth camera) are novel sensing systems that capture RGB images along with pixel-wise depth information. Although they are widely used in various applications, RGB-D sensors have significant drawbacks including limited measurement ranges (e.g., within 3 m) and errors in depth measurement increase with distance from the sensor with respect to 3D dense mapping. In this paper, we present a novel approach to geometrically integrate the depth scene and RGB scene to enlarge the measurement distance of RGB-D sensors and enrich the details of model generated from depth images. First, precise calibration for RGB-D Sensors is introduced. In addition to the calibration of internal and external parameters for both, IR camera and RGB camera, the relative pose between RGB camera and IR camera is also calibrated. Second, to ensure poses accuracy of RGB images, a refined false features matches rejection method is introduced by combining the depth information and initial camera poses between frames of the RGB-D sensor. Then, a global optimization model is used to improve the accuracy of the camera pose, decreasing the inconsistencies between the depth frames in advance. In order to eliminate the geometric inconsistencies between RGB scene and depth scene, the scale ambiguity problem encountered during the pose estimation with RGB image sequences can be resolved by integrating the depth and visual information and a robust rigid-transformation recovery method is developed to register RGB scene to depth scene. The benefit of the proposed joint optimization method is firstly evaluated with the publicly available benchmark datasets collected with Kinect. Then, the proposed method is examined by tests with two sets of datasets collected in both outside and inside environments. The experimental results demonstrate the feasibility and robustness of the proposed method. PMID:27690028

  12. Enhanced RGB-D Mapping Method for Detailed 3D Indoor and Outdoor Modeling.

    PubMed

    Tang, Shengjun; Zhu, Qing; Chen, Wu; Darwish, Walid; Wu, Bo; Hu, Han; Chen, Min

    2016-09-27

    RGB-D sensors (sensors with RGB camera and Depth camera) are novel sensing systems that capture RGB images along with pixel-wise depth information. Although they are widely used in various applications, RGB-D sensors have significant drawbacks including limited measurement ranges (e.g., within 3 m) and errors in depth measurement increase with distance from the sensor with respect to 3D dense mapping. In this paper, we present a novel approach to geometrically integrate the depth scene and RGB scene to enlarge the measurement distance of RGB-D sensors and enrich the details of model generated from depth images. First, precise calibration for RGB-D Sensors is introduced. In addition to the calibration of internal and external parameters for both, IR camera and RGB camera, the relative pose between RGB camera and IR camera is also calibrated. Second, to ensure poses accuracy of RGB images, a refined false features matches rejection method is introduced by combining the depth information and initial camera poses between frames of the RGB-D sensor. Then, a global optimization model is used to improve the accuracy of the camera pose, decreasing the inconsistencies between the depth frames in advance. In order to eliminate the geometric inconsistencies between RGB scene and depth scene, the scale ambiguity problem encountered during the pose estimation with RGB image sequences can be resolved by integrating the depth and visual information and a robust rigid-transformation recovery method is developed to register RGB scene to depth scene. The benefit of the proposed joint optimization method is firstly evaluated with the publicly available benchmark datasets collected with Kinect. Then, the proposed method is examined by tests with two sets of datasets collected in both outside and inside environments. The experimental results demonstrate the feasibility and robustness of the proposed method.

  13. Observational Requirements for High-Fidelity Reverberation Mapping

    NASA Technical Reports Server (NTRS)

    Horne, Keith; Peterson, Bradley M.; Collier, Stefan J.; Netzer, Hagai

    2004-01-01

    We present a series of simulations to demonstrate that high-fidelity velocity-delay maps of the emission-line regions in active galactic nuclei can be obtained from time-resolved spectrophotometric data sets like those that will arise from the proposed Kronos satellite. While previous reverberation-mapping experiments have established the size scale R of the broad emission-line regions from the mean time delay tau = R/c between the line and continuum variations and have provided strong evidence for supermassive black holes, the detailed structure and kinematics of the broad-line region remain ambiguous and poorly constrained. Here we outline the technical improvements that will be required to successfully map broad-line regions by reverberation techniques. For typical AGN continuum light curves, characterized by power-law power spectra P (f) is proportional to f(exp -alpha) with a = -1.5 +/- 0.5, our simulations show that a small UV/optical spectrometer like Kronos will clearly distinguish between currently viable alternative kinematic models. From spectra sampled at time intervals Delta t and sustained for a total duration T(sub dur), we can reconstruct high-fidelity velocity-delay maps with velocity resolution comparable to that of the spectra, and delay resolution Delta tau approx. 2 Delta t, provided T(sub dur) exceeds the broad-line region light crossing time by at least a factor of three. Even very complicated kinematical models, such as a Keplerian flow with superimposed spiral wave pattern, are resolved in maps from our simulated Kronos datasets. Reverberation mapping with Kronos data is therefore likely deliver the first clear maps of the geometry and kinematics in the broad emission-line regions 1-100 microarcseconds from supermassive black holes.

  14. Quantitative landslide risk assessment and mapping on the basis of recent occurrences

    NASA Astrophysics Data System (ADS)

    Remondo, Juan; Bonachea, Jaime; Cendrero, Antonio

    A quantitative procedure for mapping landslide risk is developed from considerations of hazard, vulnerability and valuation of exposed elements. The approach based on former work by the authors, is applied in the Bajo Deba area (northern Spain) where a detailed study of landslide occurrence and damage in the recent past (last 50 years) was carried out. Analyses and mapping are implemented in a Geographic Information System (GIS). The method is based on a susceptibility model developed previously from statistical relationships between past landslides and terrain parameters related to instability. Extrapolations based on past landslide behaviour were used to calculate failure frequency for the next 50 years. A detailed inventory of direct damage due to landslides during the study period was carried out and the main elements at risk in the area identified and mapped. Past direct (monetary) losses per type of element were estimated and expressed as an average 'specific loss' for events of a given magnitude (corresponding to a specified scenario). Vulnerability was assessed by comparing losses with the actual value of the elements affected and expressed as a fraction of that value (0-1). From hazard, vulnerability and monetary value, risk was computed for each element considered. Direct risk maps (€/pixel/year) were obtained and indirect losses from the disruption of economic activities due to landslides assessed. The final result is a risk map and table combining all losses per pixel for a 50-year period. Total monetary value at risk for the Bajo Deba area in the next 50 years is about 2.4 × 10 6 Euros.

  15. MapEdit: solution to continuous raster map creation

    NASA Astrophysics Data System (ADS)

    Rančić, Dejan; Djordjevi-Kajan, Slobodanka

    2003-03-01

    The paper describes MapEdit, MS Windows TM software for georeferencing and rectification of scanned paper maps. The software produces continuous raster maps which can be used as background in geographical information systems. Process of continuous raster map creation using MapEdit "mosaicking" function is also described as well as the georeferencing and rectification algorithms which are used in MapEdit. Our approach for georeferencing and rectification using four control points and two linear transformations for each scanned map part, together with nearest neighbor resampling method, represents low cost—high speed solution that produce continuous raster maps with satisfactory quality for many purposes (±1 pixel). Quality assessment of several continuous raster maps at different scales that have been created using our software and methodology, has been undertaken and results are presented in the paper. For the quality control of the produced raster maps we referred to three wide adopted standards: US Standard for Digital Cartographic Data, National Standard for Spatial Data Accuracy and US National Map Accuracy Standard. The results obtained during the quality assessment process are given in the paper and show that our maps meat all three standards.

  16. An Integrated Tone Mapping for High Dynamic Range Image Visualization

    NASA Astrophysics Data System (ADS)

    Liang, Lei; Pan, Jeng-Shyang; Zhuang, Yongjun

    2018-01-01

    There are two type tone mapping operators for high dynamic range (HDR) image visualization. HDR image mapped by perceptual operators have strong sense of reality, but will lose local details. Empirical operators can maximize local detail information of HDR image, but realism is not strong. A common tone mapping operator suitable for all applications is not available. This paper proposes a novel integrated tone mapping framework which can achieve conversion between empirical operators and perceptual operators. In this framework, the empirical operator is rendered based on improved saliency map, which simulates the visual attention mechanism of the human eye to the natural scene. The results of objective evaluation prove the effectiveness of the proposed solution.

  17. Inverse Tone Mapping Based upon Retina Response

    PubMed Central

    Huo, Yongqing; Yang, Fan; Brost, Vincent

    2014-01-01

    The development of high dynamic range (HDR) display arouses the research of inverse tone mapping methods, which expand dynamic range of the low dynamic range (LDR) image to match that of HDR monitor. This paper proposed a novel physiological approach, which could avoid artifacts occurred in most existing algorithms. Inspired by the property of the human visual system (HVS), this dynamic range expansion scheme performs with a low computational complexity and a limited number of parameters and obtains high-quality HDR results. Comparisons with three recent algorithms in the literature also show that the proposed method reveals more important image details and produces less contrast loss and distortion. PMID:24744678

  18. 7A projection map of the S-layer protein sbpA obtained with trehalose-embedded monolayer crystals.

    PubMed

    Norville, Julie E; Kelly, Deborah F; Knight, Thomas F; Belcher, Angela M; Walz, Thomas

    2007-12-01

    Two-dimensional crystallization on lipid monolayers is a versatile tool to obtain structural information of proteins by electron microscopy. An inherent problem with this approach is to prepare samples in a way that preserves the crystalline order of the protein array and produces specimens that are sufficiently flat for high-resolution data collection at high tilt angles. As a test specimen to optimize the preparation of lipid monolayer crystals for electron microscopy imaging, we used the S-layer protein sbpA, a protein with potential for designing arrays of both biological and inorganic materials with engineered properties for a variety of nanotechnology applications. Sugar embedding is currently considered the best method to prepare two-dimensional crystals of membrane proteins reconstituted into lipid bilayers. We found that using a loop to transfer lipid monolayer crystals to an electron microscopy grid followed by embedding in trehalose and quick-freezing in liquid ethane also yielded the highest resolution images for sbpA lipid monolayer crystals. Using images of specimens prepared in this way we could calculate a projection map of sbpA at 7A resolution, one of the highest resolution projection structures obtained with lipid monolayer crystals to date.

  19. Construction of a Transcription Map for Papillomaviruses using RACE, RNAse Protection and Primer Extension Assays

    PubMed Central

    Wang, Xiaohong; Zheng, Zhi-Ming

    2016-01-01

    Papillomaviruses are a family of small, non-enveloped DNA tumor viruses. Knowing a complete transcription map from each papillomavirus genome can provide guidance for various papillomavirus studies. This unit provides detailed protocols to construct a transcription map of human papillomavirus type 18. The same approach can be easily adapted to other transcription map studies of any other papillomavirus genotype due to the high degree of conservation in the genome structure, organization and gene expression among papillomaviruses. The focused methods are 5’- and 3’- rapid amplification of cDNA ends (RACE), which are the techniques commonly used in molecular biology to obtain the full length RNA transcript or to map a transcription start site (TSS) or an RNA polyadenylation (pA) cleavage site. Primer walking RT-PCR is a method for studying splicing junction of RACE products. In addition, RNase protection assay and primer extension are also introduced as alternative methods in the mapping analysis. PMID:26855281

  20. The MAPS Reporting Statement for Studies Mapping onto Generic Preference-Based Outcome Measures: Explanation and Elaboration.

    PubMed

    Petrou, Stavros; Rivero-Arias, Oliver; Dakin, Helen; Longworth, Louise; Oppe, Mark; Froud, Robert; Gray, Alastair

    2015-10-01

    The process of "mapping" is increasingly being used to predict health utilities, for application within health economic evaluations, using data on other indicators or measures of health. Guidance for the reporting of mapping studies is currently lacking. The overall objective of this research was to develop a checklist of essential items, which authors should consider when reporting mapping studies. The MAPS (MApping onto Preference-based measures reporting Standards) statement is a checklist, which aims to promote complete and transparent reporting by researchers. This paper provides a detailed explanation and elaboration of the items contained within the MAPS statement. In the absence of previously published reporting checklists or reporting guidance documents, a de novo list of reporting items and accompanying explanations was created. A two-round, modified Delphi survey, with representatives from academia, consultancy, health technology assessment agencies and the biomedical journal editorial community, was used to identify a list of essential reporting items from this larger list. From the initial de novo list of 29 candidate items, a set of 23 essential reporting items was developed. The items are presented numerically and categorised within six sections, namely, (i) title and abstract, (ii) introduction, (iii) methods, (iv) results, (v) discussion and (vi) other. For each item, we summarise the recommendation, illustrate it using an exemplar of good reporting practice identified from the published literature, and provide a detailed explanation to accompany the recommendation. It is anticipated that the MAPS statement will promote clarity, transparency and completeness of reporting of mapping studies. It is targeted at researchers developing mapping algorithms, peer reviewers and editors involved in the manuscript review process for mapping studies, and the funders of the research. The MAPS working group plans to assess the need for an update of the reporting

  1. Separate the inseparable one-layer mapping

    NASA Astrophysics Data System (ADS)

    Hu, Chia-Lun J.

    2000-04-01

    When the input-output mapping of a one-layered perceptron (OLP) does NOT meet the PLI condition which is the if-and- only-if, or 'IFF, condition that the mapping can be realized by a OLP, then no matter what learning rule we use, a OLP just cannot realize this mapping at all. However, because of the nature of the PLI, one can still construct a parallel- cascaded, two-layered perceptron system to realize this `illegal' mapping. Theory and design example of this novel design will be reported in detail in this paper.

  2. Geologic map of the Devore 7.5' quadrangle, San Bernardino County, California

    USGS Publications Warehouse

    Morton, Douglas M.; Matti, Jonathan C.

    2001-01-01

    This Open-File Report contains a digital geologic map database of the Devore 7.5' quadrangle, San Bernardino County, California, that includes: 1. ARC/INFO (Environmental Systems Research Institute) version 7.2.1 coverages of the various components of the geologic map 2. A PostScript (.ps) file to plot the geologic map on a topographic base, containing a Correlation of Map Units diagram, a Description of Map Units, an index map, and a regional structure map 3. Portable Document Format (.pdf) files of: a. This Readme; includes an Appendix, containing metadata details found in devre_met.txt b. The same graphic as plotted in 2 above. (Test plots from this .pdf do not produce 1:24,000-scale maps. Adobe Acrobat page-size settings control map scale.) The Correlation of Map Units and Description of Map Units are in the editorial format of USGS Miscellaneous Investigations Series maps (I-maps) but have not been edited to comply with I-map standards. Within the geologic-map data package, map units are identified by such standard geologic-map criteria as formation name, age, and lithology. Even though this is an author-prepared report, every attempt has been made to closely adhere to the stratigraphic nomenclature of the U.S. Geological Survey. Descriptions of units can be obtained by viewing or plotting the .pdf file (3b above) or plotting the postscript file (2 above). If roads in some areas, especially forest roads that parallel topographic contours, do not show well on plots of the geologic map, we recommend use of the USGS Devore 7.5’ topographic quadrangle in conjunction with the geologic map.

  3. Mapping the Active Vents of Stromboli Volcano with an Unmanned Aerial Vehicle

    NASA Astrophysics Data System (ADS)

    Turner, N.; Houghton, B. F.; von der Lieth, J.; Hort, M. K.; Taddeucci, J.; Kueppers, U.; Ricci, T.; Gaudin, D.

    2016-12-01

    We present a new detailed map of the active vents of Stromboli volcano obtained from UAV flights in May 2016, when the active NE and SW craters were repeatedly mapped. Due to high levels of gas emissions and frequent explosions, fine-scale measurements of vent geometry from single flights were challenging. However, the compilation of data acquired over 12 flights used with Structure from Motion software allowed us to create a 10 cm Digital Elevation Model (DEM) offering a non-obstructed view into the active craters. Such direct observations permits us to constrain parameters such as vent geometry and depth with an unprecedented precision, thus potentially reducing the uncertainty of models depending on such inputs (e.g. conduit and acoustic models). Furthermore, the low-cost and safety of UAVs allows mapping changes at small temporal and spatial resolutions, making this technique complementary to monitoring efforts at active volcanoes.

  4. Geologic Map of the Umiat Quadrangle, Alaska

    USGS Publications Warehouse

    Mull, Charles G.; Houseknecht, David W.; Pessel, G.H.; Garrity, Christopher P.

    2004-01-01

    This geologic map of the Umiat quadrangle is a compilation of previously published USGS geologic maps and unpublished mapping done for the Richfield Oil Corporation. Geologic mapping from these three primary sources was augmented with additional unpublished map data from British Petroleum Company. This report incorporates recent revisions in stratigraphic nomenclature. Stratigraphic and structural interpretations were revised with the aid of modern high-resolution color infrared aerial photographs. The revised geologic map was checked in the field during the summers of 2001 and 2002. The geologic unit descriptions on this map give detailed information on thicknesses, regional distributions, age determinations, and depositional environments. The paper version of this map is available for purchase from the USGS Store.

  5. Evaluation of using digital gravity field models for zoning map creation

    NASA Astrophysics Data System (ADS)

    Loginov, Dmitry

    2018-05-01

    At the present time the digital cartographic models of geophysical fields are taking a special significance into geo-physical mapping. One of the important directions to their application is the creation of zoning maps, which allow taking into account the morphology of geophysical field in the implementation automated choice of contour intervals. The purpose of this work is the comparative evaluation of various digital models in the creation of integrated gravity field zoning map. For comparison were chosen the digital model of gravity field of Russia, created by the analog map with scale of 1 : 2 500 000, and the open global model of gravity field of the Earth - WGM2012. As a result of experimental works the four integrated gravity field zoning maps were obtained with using raw and processed data on each gravity field model. The study demonstrates the possibility of open data use to create integrated zoning maps with the condition to eliminate noise component of model by processing in specialized software systems. In this case, for solving problem of contour intervals automated choice the open digital models aren't inferior to regional models of gravity field, created for individual countries. This fact allows asserting about universality and independence of integrated zoning maps creation regardless of detail of a digital cartographic model of geo-physical fields.

  6. Cross-domain question classification in community question answering via kernel mapping

    NASA Astrophysics Data System (ADS)

    Su, Lei; Hu, Zuoliang; Yang, Bin; Li, Yiyang; Chen, Jun

    2015-10-01

    An increasingly popular method for retrieving information is via the community question answering (CQA) systems such as Yahoo! Answers and Baidu Knows. In CQA, question classification plays an important role to find the answers. However, the labeled training examples for statistical question classifier are fairly expensive to obtain, as they require the experienced human efforts. Meanwhile, unlabeled data are readily available. This paper employs the method of domain adaptation via kernel mapping to solve this problem. In detail, the kernel approach is utilized to map the target-domain data and the source-domain data into a common space, where the question classifiers are trained under the closer conditional probabilities. The kernel mapping function is constructed by domain knowledge. Therefore, domain knowledge could be transferred from the labeled examples in the source domain to the unlabeled ones in the targeted domain. The statistical training model can be improved by using a large number of unlabeled data. Meanwhile, the Hadoop Platform is used to construct the mapping mechanism to reduce the time complexity. Map/Reduce enable kernel mapping for domain adaptation in parallel in the Hadoop Platform. Experimental results show that the accuracy of question classification could be improved by the method of kernel mapping. Furthermore, the parallel method in the Hadoop Platform could effective schedule the computing resources to reduce the running time.

  7. Magnified pseudo-elemental map of atomic column obtained by Moiré method in scanning transmission electron microscopy.

    PubMed

    Kondo, Yukihito; Okunishi, Eiji

    2014-10-01

    Moiré method in scanning transmission electron microscopy allows observing a magnified two-dimensional atomic column elemental map of a higher pixel resolution with a lower electron dose unlike conventional atomic column mapping. The magnification of the map is determined by the ratio between the pixel size and the lattice spacing. With proper ratios for the x and y directions, we could observe magnified elemental maps, homothetic to the atomic arrangement in the sample of SrTiO3 [0 0 1]. The map showed peaks at all expected oxygen sites in SrTiO3 [0 0 1]. © The Author 2014. Published by Oxford University Press on behalf of The Japanese Society of Microscopy. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  8. Target-specific digital soil mapping supporting terroir mapping in Tokaj Wine Region, Hungary

    NASA Astrophysics Data System (ADS)

    Takács, Katalin; Szabó, József; Laborczi, Annamária; Szatmári, Gábor; László, Péter; Koós, Sándor; Bakacsi, Zsófia; Pásztor, László

    2016-04-01

    Tokaj Wine Region - located in Northeast-Hungary, at Hegyalja, in Tokaj Mountains - is a historical region for botrityzed dessert wine making. Very recently the sustainable quality wine production in the region was targeted, which requires detailed and "terroir-based approach" characterization of viticultural land and the survey of the state of vineyards. Terroir is a homogeneous area that relates to both environmental and cultural factors, that influence the grape and wine quality. Soil plays dominant role determining the viticultural potential and terroir delineation. According to viticultural experts the most relevant soil properties are drainage, water holding capacity, soil depth and pH. Not all of these soil characteristics can be directly measured, therefore the synthesis of observed soil properties is needed to satisfy the requirements of terroir mapping. The sampling strategy was designed to be representative to the combinations of basic environmental parameters (slope, aspect and geology) which determine the main soil properties of the vineyards. Field survey was carried out in two steps. At first soil samples were collected from 200 sites to obtain a general view about the pedology of the area. In the second stage further 650 samples were collected and the sampling strategy was designed based on spatial annealing technique taking into consideration the results of the preliminary survey and the local characteristics of vineyards. The data collection regarded soil type, soil depth, parent material, rate of erosion, organic matter content and further physical and chemical soil properties which support the inference of the proper soil parameters. In the framework of the recent project 33 primary and secondary soil property, soil class and soil function maps were compiled. A set of the resulting maps supports to meet the demands of the Hungarian standard viticultural potential assessment, while the majority of the maps is intended to be applied for terroir

  9. Karst map of Puerto Rico

    USGS Publications Warehouse

    Alemán González, Wilma B.

    2010-01-01

    This map is a digital compilation, combining the mapping of earlier geologists. Their work, cited on the map, contains more detailed descriptions of karst areas and landforms in Puerto Rico. This map is the basis for the Puerto Rico part of a new national karst map currently being compiled by the U.S. Geological Survey. In addition, this product is a standalone, citable source of digital karst data for Puerto Rico. Nearly 25 percent of the United States is underlain by karst terrain, and a large part of that area is undergoing urban and industrial development. Accurate delineations of karstic rocks are needed at scales suitable for national, State, and local maps. The data on this map contribute to a better understanding of subsidence hazards, groundwater contamination potential, and cave resources as well as serve as a guide to topical research on karst. Because the karst data were digitized from maps having a different scale and projection from those on the base map used for this publication, some karst features may not coincide perfectly with physiographic features portrayed on the base map.

  10. Mapping Soil Organic Matter with Hyperspectral Imaging

    NASA Astrophysics Data System (ADS)

    Moni, Christophe; Burud, Ingunn; Flø, Andreas; Rasse, Daniel

    2014-05-01

    Soil organic matter (SOM) plays a central role for both food security and the global environment. Soil organic matter is the 'glue' that binds soil particles together, leading to positive effects on soil water and nutrient availability for plant growth and helping to counteract the effects of erosion, runoff, compaction and crusting. Hyperspectral measurements of samples of soil profiles have been conducted with the aim of mapping soil organic matter on a macroscopic scale (millimeters and centimeters). Two soil profiles have been selected from the same experimental site, one from a plot amended with biochar and another one from a control plot, with the specific objective to quantify and map the distribution of biochar in the amended profile. The soil profiles were of size (30 x 10 x 10) cm3 and were scanned with two pushbroomtype hyperspectral cameras, one which is sensitive in the visible wavelength region (400 - 1000 nm) and one in the near infrared region (1000 - 2500 nm). The images from the two detectors were merged together into one full dataset covering the whole wavelength region. Layers of 15 mm were removed from the 10 cm high sample such that a total of 7 hyperspectral images were obtained from the samples. Each layer was analyzed with multivariate statistical techniques in order to map the different components in the soil profile. Moreover, a 3-dimensional visalization of the components through the depth of the sample was also obtained by combining the hyperspectral images from all the layers. Mid-infrared spectroscopy of selected samples of the measured soil profiles was conducted in order to correlate the chemical constituents with the hyperspectral results. The results show that hyperspectral imaging is a fast, non-destructive technique, well suited to characterize soil profiles on a macroscopic scale and hence to map elements and different organic matter quality present in a complete pedon. As such, we were able to map and quantify biochar in our

  11. Tectonic map of the Arabian Peninsula

    USGS Publications Warehouse

    Brown, Glen F.

    1972-01-01

    This tectonic map of the Arabian peninsula, prepared for the Audi Arabian Ministry of Petroleum and Mineral Resource, is the first of a series of peninsular maps that attempt to show regional features. Much recent information resulting from detailed geologic mapping notably within the Arabian craton, from geophysical surveys, both airborne and oceanographic in adjacent seas, from deep exploratory drilling, and from photography from the Gemini and Apollo space programs, has been used in the tectonic evaluation.

  12. Detailed geomorphological mapping of debris-covered and rock glaciers in the Hólar area, Tröllaskagi Peninsula (northern Iceland).

    NASA Astrophysics Data System (ADS)

    Tanarro, Luis M.; Palacios, David; Zamorano, Jose J.; Andres, Nuria

    2017-04-01

    Most studies conducted on rock and debris-covered glaciers only include simplified geomorphological maps representing main units (ridges, furrows, front, and thermokarst depressions). The aim of this study is to develop a detailed geomorphological mapping of the Hóladalsjökull debris-covered glacier (65°42' N; 18°57' W) and the Fremri-Grjótárdalur rock glacier (65°43' N 19° W), located near Hólar, a village in the central area of the Trolläskagi peninsula (northern Iceland). The mapping process has been conducted using standard stereo-photointerpretation of aerial photographs and stereo-plotting of a topographic map at 1:2000 scale. Also, landforms have been represented in different transects. Lastly, the geomorphological map has been designed using the elevation digital model, and a 3D pdf file has been generated, allowing for better viewing and understanding the different units and their modelling. The geomorphological mapping of the Hóladalsjökull debris-covered glacier and the Fremri-Grjótárdalur rock glacier represents the prominent walls of their valley heads and their summits, which form a flat highland at 1,200-1,330 metres above sea level, covered by blockfield and patterned ground features. Rockfall and slide landforms are common processes at the foot of these 100-170 metre-high cirque-walls. Debris-covered glaciers and rock glaciers are born right under these walls, building up a spoon-shaped hollow around glacial ice, surrounded by young moraine ridges at their fronts. The dominant features in the Hóladalsjökull debris-covered glacier are large longitudinal ridges and furrows, stretching over 1.5 km in length in the central and western areas. Medium-sized thermokarst depressions (between 15-40 metres in diameter), often running parallel to the furrows, dot the surface of the debris-covered glacier. Parallel alternate ridges and furrows can be seen near the snout. Ridges are rugged and fall around 30-40 metres, with over 30 degree slopes

  13. Mapping Mixed Methods Research: Methods, Measures, and Meaning

    ERIC Educational Resources Information Center

    Wheeldon, J.

    2010-01-01

    This article explores how concept maps and mind maps can be used as data collection tools in mixed methods research to combine the clarity of quantitative counts with the nuance of qualitative reflections. Based on more traditional mixed methods approaches, this article details how the use of pre/post concept maps can be used to design qualitative…

  14. Differential Epitope Mapping by STD NMR Spectroscopy To Reveal the Nature of Protein-Ligand Contacts.

    PubMed

    Monaco, Serena; Tailford, Louise E; Juge, Nathalie; Angulo, Jesus

    2017-11-27

    Saturation transfer difference (STD) NMR spectroscopy is extensively used to obtain epitope maps of ligands binding to protein receptors, thereby revealing structural details of the interaction, which is key to direct lead optimization efforts in drug discovery. However, it does not give information about the nature of the amino acids surrounding the ligand in the binding pocket. Herein, we report the development of the novel method differential epitope mapping by STD NMR (DEEP-STD NMR) for identifying the type of protein residues contacting the ligand. The method produces differential epitope maps through 1) differential frequency STD NMR and/or 2) differential solvent (D 2 O/H 2 O) STD NMR experiments. The two approaches provide different complementary information on the binding pocket. We demonstrate that DEEP-STD NMR can be used to readily obtain pharmacophore information on the protein. Furthermore, if the 3D structure of the protein is known, this information also helps in orienting the ligand in the binding pocket. © 2017 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA.

  15. Mapping the Baby Universe

    NASA Technical Reports Server (NTRS)

    Wanjek, Christopher

    2003-01-01

    In June, NASA plans to launch the Microwave Anisotropy Probe (MAP) to survey the ancient radiation in unprecedented detail. MAP will map slight temperature fluctuations within the microwave background that vary by only 0.00001 C across a chilly radiation that now averages 2.73 C above absolute zero. The temperature differences today point back to density differences in the fiery baby universe, in which there was a little more matter here and a little less matter there. Areas of slightly enhanced density had stronger gravity than low-density areas. The high-density areas pulled back on the background radiation, making it appear slightly cooler in those directions.

  16. Design and application of star map simulation system for star sensors

    NASA Astrophysics Data System (ADS)

    Wu, Feng; Shen, Weimin; Zhu, Xifang; Chen, Yuheng; Xu, Qinquan

    2013-12-01

    Modern star sensors are powerful to measure attitude automatically which assure a perfect performance of spacecrafts. They achieve very accurate attitudes by applying algorithms to process star maps obtained by the star camera mounted on them. Therefore, star maps play an important role in designing star cameras and developing procession algorithms. Furthermore, star maps supply significant supports to exam the performance of star sensors completely before their launch. However, it is not always convenient to supply abundant star maps by taking pictures of the sky. Thus, star map simulation with the aid of computer attracts a lot of interests by virtue of its low price and good convenience. A method to simulate star maps by programming and extending the function of the optical design program ZEMAX is proposed. The star map simulation system is established. Firstly, based on analyzing the working procedures of star sensors to measure attitudes and the basic method to design optical system by ZEMAX, the principle of simulating star sensor imaging is given out in detail. The theory about adding false stars and noises, and outputting maps is discussed and the corresponding approaches are proposed. Then, by external programming, the star map simulation program is designed and produced. Its user interference and operation are introduced. Applications of star map simulation method in evaluating optical system, star image extraction algorithm and star identification algorithm, and calibrating system errors are presented completely. It was proved that the proposed simulation method provides magnificent supports to the study on star sensors, and improves the performance of star sensors efficiently.

  17. Tetlin National Wildlife Refuge land cover mapping project users guide

    USGS Publications Warehouse

    Markon, Carl J.

    1987-01-01

    The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner data (MSS) and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail, obtained from the analysis of Landsat data, is adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

  18. Selawik National Wildlife Refuge land cover mapping project users guide

    USGS Publications Warehouse

    Markon, Carl J.

    1988-01-01

    The U.S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner (MSS) data and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for the refuge and because the level of detail obtained from Landsat data was adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

  19. Ningaloo Reef: Shallow Marine Habitats Mapped Using a Hyperspectral Sensor

    PubMed Central

    Kobryn, Halina T.; Wouters, Kristin; Beckley, Lynnath E.; Heege, Thomas

    2013-01-01

    Research, monitoring and management of large marine protected areas require detailed and up-to-date habitat maps. Ningaloo Marine Park (including the Muiron Islands) in north-western Australia (stretching across three degrees of latitude) was mapped to 20 m depth using HyMap airborne hyperspectral imagery (125 bands) at 3.5 m resolution across the 762 km2 of reef environment between the shoreline and reef slope. The imagery was corrected for atmospheric, air-water interface and water column influences to retrieve bottom reflectance and bathymetry using the physics-based Modular Inversion and Processing System. Using field-validated, image-derived spectra from a representative range of cover types, the classification combined a semi-automated, pixel-based approach with fuzzy logic and derivative techniques. Five thematic classification levels for benthic cover (with probability maps) were generated with varying degrees of detail, ranging from a basic one with three classes (biotic, abiotic and mixed) to the most detailed with 46 classes. The latter consisted of all abiotic and biotic seabed components and hard coral growth forms in dominant or mixed states. The overall accuracy of mapping for the most detailed maps was 70% for the highest classification level. Macro-algal communities formed most of the benthic cover, while hard and soft corals represented only about 7% of the mapped area (58.6 km2). Dense tabulate coral was the largest coral mosaic type (37% of all corals) and the rest of the corals were a mix of tabulate, digitate, massive and soft corals. Our results show that for this shallow, fringing reef environment situated in the arid tropics, hyperspectral remote sensing techniques can offer an efficient and cost-effective approach to mapping and monitoring reef habitats over large, remote and inaccessible areas. PMID:23922921

  20. Global Environmental Data for Mapping Infectious Disease Distribution

    PubMed Central

    Hay, S.I.; Tatem, A.J.; Graham, A.J.; Goetz, S.J.; Rogers, D.J.

    2011-01-01

    This contribution documents the satellite data archives, data processing methods and temporal Fourier analysis (TFA) techniques used to create the remotely sensed datasets on the DVD distributed with this volume. The aim is to provide a detailed reference guide to the genesis of the data, rather than a standard review. These remotely sensed data cover the entire globe at either 1 × 1 or 8 × 8 km spatial resolution. We briefly evaluate the relationships between the 1 × 1 and 8 × 8 km global TFA products to explore their inter-compatibility. The 8 × 8 km TFA surfaces are used in the mapping procedures detailed in the subsequent disease mapping reviews, since the 1 × 1 km products have been validated less widely. Details are also provided on additional, current and planned sensors that should be able to provide continuity with these environmental variable surfaces, as well as other sources of global data that may be used for mapping infectious disease. PMID:16647967

  1. Survey on Ontology Mapping

    NASA Astrophysics Data System (ADS)

    Zhu, Junwu

    To create a sharable semantic space in which the terms from different domain ontology or knowledge system, Ontology mapping become a hot research point in Semantic Web Community. In this paper, motivated factors of ontology mapping research are given firstly, and then 5 dominating theories and methods, such as information accessing technology, machine learning, linguistics, structure graph and similarity, are illustrated according their technology class. Before we analyses the new requirements and takes a long view, the contributions of these theories and methods are summarized in details. At last, this paper suggest to design a group of semantic connector with the ability of migration learning for OWL-2 extended with constrains and the ontology mapping theory of axiom, so as to provide a new methodology for ontology mapping.

  2. SEPAC flight software detailed design specifications, volume 1

    NASA Technical Reports Server (NTRS)

    1982-01-01

    The detailed design specifications (as built) for the SEPAC Flight Software are defined. The design includes a description of the total software system and of each individual module within the system. The design specifications describe the decomposition of the software system into its major components. The system structure is expressed in the following forms: the control-flow hierarchy of the system, the data-flow structure of the system, the task hierarchy, the memory structure, and the software to hardware configuration mapping. The component design description includes details on the following elements: register conventions, module (subroutines) invocaton, module functions, interrupt servicing, data definitions, and database structure.

  3. Suitability aero-geophysical methods for generating conceptual soil maps and their use in the modeling of process-related susceptibility maps

    NASA Astrophysics Data System (ADS)

    Tilch, Nils; Römer, Alexander; Jochum, Birgit; Schattauer, Ingrid

    2014-05-01

    In the past years, several times large-scale disasters occurred in Austria, which were characterized not only by flooding, but also by numerous shallow landslides and debris flows. Therefore, for the purpose of risk prevention, national and regional authorities also require more objective and realistic maps with information about spatially variable susceptibility of the geosphere for hazard-relevant gravitational mass movements. There are many and various proven methods and models (e.g. neural networks, logistic regression, heuristic methods) available to create such process-related (e.g. flat gravitational mass movements in soil) suszeptibility maps. But numerous national and international studies show a dependence of the suitability of a method on the quality of process data and parameter maps (f.e. Tilch & Schwarz 2011, Schwarz & Tilch 2011). In this case, it is important that also maps with detailed and process-oriented information on the process-relevant geosphere will be considered. One major disadvantage is that only occasionally area-wide process-relevant information exists. Similarly, in Austria often only soil maps for treeless areas are available. However, in almost all previous studies, randomly existing geological and geotechnical maps were used, which often have been specially adapted to the issues and objectives. This is one reason why very often conceptual soil maps must be derived from geological maps with only hard rock information, which often have a rather low quality. Based on these maps, for example, adjacent areas of different geological composition and process-relevant physical properties are razor sharp delineated, which in nature appears quite rarly. In order to obtain more realistic information about the spatial variability of the process-relevant geosphere (soil cover) and its physical properties, aerogeophysical measurements (electromagnetic, radiometric), carried out by helicopter, from different regions of Austria were interpreted

  4. Automatic Texture Mapping of Architectural and Archaeological 3d Models

    NASA Astrophysics Data System (ADS)

    Kersten, T. P.; Stallmann, D.

    2012-07-01

    Today, detailed, complete and exact 3D models with photo-realistic textures are increasingly demanded for numerous applications in architecture and archaeology. Manual texture mapping of 3D models by digital photographs with software packages, such as Maxon Cinema 4D, Autodesk 3Ds Max or Maya, still requires a complex and time-consuming workflow. So, procedures for automatic texture mapping of 3D models are in demand. In this paper two automatic procedures are presented. The first procedure generates 3D surface models with textures by web services, while the second procedure textures already existing 3D models with the software tmapper. The program tmapper is based on the Multi Layer 3D image (ML3DImage) algorithm and developed in the programming language C++. The studies showing that the visibility analysis using the ML3DImage algorithm is not sufficient to obtain acceptable results of automatic texture mapping. To overcome the visibility problem the Point Cloud Painter algorithm in combination with the Z-buffer-procedure will be applied in the future.

  5. Enhanced visual perception through tone mapping

    NASA Astrophysics Data System (ADS)

    Harrison, Andre; Mullins, Linda L.; Raglin, Adrienne; Etienne-Cummings, Ralph

    2016-05-01

    Tone mapping operators compress high dynamic range images to improve the picture quality on a digital display when the dynamic range of the display is lower than that of the image. However, tone mapping operators have been largely designed and evaluated based on the aesthetic quality of the resulting displayed image or how perceptually similar the compressed image appears relative to the original scene. They also often require per image tuning of parameters depending on the content of the image. In military operations, however, the amount of information that can be perceived is more important than the aesthetic quality of the image and any parameter adjustment needs to be as automated as possible regardless of the content of the image. We have conducted two studies to evaluate the perceivable detail of a set of tone mapping algorithms, and we apply our findings to develop and test an automated tone mapping algorithm that demonstrates a consistent improvement in the amount of perceived detail. An automated, and thereby predictable, tone mapping method enables a consistent presentation of perceivable features, can reduce the bandwidth required to transmit the imagery, and can improve the accessibility of the data by reducing the needed expertise of the analyst(s) viewing the imagery.

  6. [CT pulmonary density mapping: surgical utility].

    PubMed

    Gavezzoli, D; Caputo, P; Manelli, A; Zuccon, W; Faccini, M; Bonandrini, L

    2002-04-01

    The present paper considers the technique of CT scan maps of pulmonary isodensity, examining lung density differences as a function of the type of disease and considering their significance for the purposes of refined, useful diagnosis in a surgical context. METHODS. The method is used to examine 3 groups of subjects selected on a clinical/anamnestic basis and a further group already admitted for surgery. For each patient we obtained 2 thoracic density scans during the phase of maximum inspiration and expiration. On each scan we constructed 50 isodensity maps, the equivalent of more than 2500 measurements: the preliminary standard was represented by 100 wide windows to produce total "illumination" of the pulmonary fields. The isodensity windows were then codified differently. Subsequently, the density scans were analysed with the technique of scalar decomposition. The CT scan maps of lung isodensity proved useful for certain lung diseases in which early diagnosis, topographic extent of the pathology and the refined definition of the pathological picture provide important solutions as regards the indication and planning of surgical treatment and for the evaluation of the operative risk and prognosis. We consider that the technique is rapidly performed, not complex and inexpensive and is able to supply detailed information on the lung parenchyma such as to be used not only as a routine technique but also in emergencies.

  7. Uav-Mapping - a User Report

    NASA Astrophysics Data System (ADS)

    Mayr, W.

    2011-09-01

    This paper reports on first hand experiences in operating an unmanned airborne system (UAS) for mapping purposes in the environment of a mapping company. Recently, a multitude of activities in UAVs is visible, and there is growing interest in the commercial, industrial, and academic mapping user communities and not only in those. As an introduction, the major components of an UAS are identified. The paper focuses on a 1.1kg UAV which is integrated and gets applied on a day-to-day basis as part of an UAS in standard aerial imaging tasks for more than two years already. We present the unmanned airborne vehicle in some detail as well as the overall system components such as autopilot, ground station, flight mission planning and control, and first level image processing. The paper continues with reporting on experiences gained in setting up constraints such a system needs to fulfill. Further on, operational aspects with emphasis on unattended flight mission mode are presented. Various examples show the applicability of UAS in geospatial tasks, proofing that UAS are capable delivering reliably e.g. orthomosaics, digital surface models and more. Some remarks on achieved accuracies give an idea on obtainable qualities. A discussion about safety features puts some light on important matters when entering unmanned flying activities and rounds up this paper. Conclusions summarize the state of the art of an operational UAS from the point of the view of the author.

  8. Generating Multi-Destination Maps.

    PubMed

    Zhang, Junsong; Fan, Jiepeng; Luo, Zhenshan

    2017-08-01

    Multi-destination maps are a kind of navigation maps aimed to guide visitors to multiple destinations within a region, which can be of great help to urban visitors. However, they have not been developed in the current online map service. To address this issue, we introduce a novel layout model designed especially for generating multi-destination maps, which considers the global and local layout of a multi-destination map. We model the layout problem as a graph drawing that satisfies a set of hard and soft constraints. In the global layout phase, we balance the scale factor between ROIs. In the local layout phase, we make all edges have good visibility and optimize the map layout to preserve the relative length and angle of roads. We also propose a perturbation-based optimization method to find an optimal layout in the complex solution space. The multi-destination maps generated by our system are potential feasible on the modern mobile devices and our result can show an overview and a detail view of the whole map at the same time. In addition, we perform a user study to evaluate the effectiveness of our method, and the results prove that the multi-destination maps achieve our goals well.

  9. New false color mapping for image fusion

    NASA Astrophysics Data System (ADS)

    Toet, Alexander; Walraven, Jan

    1996-03-01

    A pixel-based color-mapping algorithm is presented that produces a fused false color rendering of two gray-level images representing different sensor modalities. The resulting images have a higher information content than each of the original images and retain sensor-specific image information. The unique component of each image modality is enhanced in the resulting fused color image representation. First, the common component of the two original input images is determined. Second, the common component is subtracted from the original images to obtain the unique component of each image. Third, the unique component of each image modality is subtracted from the image of the other modality. This step serves to enhance the representation of sensor-specific details in the final fused result. Finally, a fused color image is produced by displaying the images resulting from the last step through, respectively, the red and green channels of a color display. The method is applied to fuse thermal and visual images. The results show that the color mapping enhances the visibility of certain details and preserves the specificity of the sensor information. The fused images also have a fairly natural appearance. The fusion scheme involves only operations on corresponding pixels. The resolution of a fused image is therefore directly related to the resolution of the input images. Before fusing, the contrast of the images can be enhanced and their noise can be reduced by standard image- processing techniques. The color mapping algorithm is computationally simple. This implies that the investigated approaches can eventually be applied in real time and that the hardware needed is not too complicated or too voluminous (an important consideration when it has to fit in an airplane, for instance).

  10. Pixel-based image fusion with false color mapping

    NASA Astrophysics Data System (ADS)

    Zhao, Wei; Mao, Shiyi

    2003-06-01

    In this paper, we propose a pixel-based image fusion algorithm that combines the gray-level image fusion method with the false color mapping. This algorithm integrates two gray-level images presenting different sensor modalities or at different frequencies and produces a fused false-color image. The resulting image has higher information content than each of the original images. The objects in the fused color image are easy to be recognized. This algorithm has three steps: first, obtaining the fused gray-level image of two original images; second, giving the generalized high-boost filtering images between fused gray-level image and two source images respectively; third, generating the fused false-color image. We use the hybrid averaging and selection fusion method to obtain the fused gray-level image. The fused gray-level image will provide better details than two original images and reduce noise at the same time. But the fused gray-level image can't contain all detail information in two source images. At the same time, the details in gray-level image cannot be discerned as easy as in a color image. So a color fused image is necessary. In order to create color variation and enhance details in the final fusion image, we produce three generalized high-boost filtering images. These three images are displayed through red, green and blue channel respectively. A fused color image is produced finally. This method is used to fuse two SAR images acquired on the San Francisco area (California, USA). The result shows that fused false-color image enhances the visibility of certain details. The resolution of the final false-color image is the same as the resolution of the input images.

  11. Detailed Sections from Auger Holes in the Emporia 1:100,000-Scale Quadrangle, North Carolina and Virginia

    USGS Publications Warehouse

    Weems, Robert E.; Schindler, J. Stephen; Lewis, William C.

    2010-01-01

    The Emporia 1:100,000-scale quadrangle straddles the Tidewater Fall Line in southern Virginia and includes a small part of northernmost North Carolina. Sediments of the coastal plain underlie the eastern three-fifths of this area. These sediments onlap crystalline basement rocks toward the west and dip gently to the east, reaching a maximum known thickness of 821 feet in the extreme southeastern part of the map area. The gentle eastward dip is disrupted in several areas due to faulting delineated during the course of mapping. In order to produce a new geologic map of the Emporia 1:100,000-scale quadrangle, the U.S. Geological Survey drilled one corehole to a depth of 223 feet and augered 192 shallow research test holes (maximum depth 135 feet) to supplement sparse outcrop data available from the coastal plain part of the map area. The recovered sediments were studied and data from them recorded to determine the lithologic characteristics, spatial distribution, and temporal framework of the represented coastal plain stratigraphic units. These test holes were critical for accurately determining the distribution of major geologic units and the position of unit boundaries that will be shown on the forthcoming Emporia geologic map, but much of the detailed subsurface data cannot be shown readily through this map product. Therefore, the locations and detailed descriptions of the auger test holes and one corehole are provided in this open-file report for geologists, hydrologists, engineers, and community planners in need of a detailed shallow-subsurface stratigraphic framework for much of the Emporia map region.

  12. Feasibility of Smartphone Based Photogrammetric Point Clouds for the Generation of Accessibility Maps

    NASA Astrophysics Data System (ADS)

    Angelats, E.; Parés, M. E.; Kumar, P.

    2018-05-01

    Accessible cities with accessible services are an old claim of people with reduced mobility. But this demand is still far away of becoming a reality as lot of work is required to be done yet. First step towards accessible cities is to know about real situation of the cities and its pavement infrastructure. Detailed maps or databases on street slopes, access to sidewalks, mobility in public parks and gardens, etc. are required. In this paper, we propose to use smartphone based photogrammetric point clouds, as a starting point to create accessible maps or databases. This paper analyses the performance of these point clouds and the complexity of the image acquisition procedure required to obtain them. The paper proves, through two test cases, that smartphone technology is an economical and feasible solution to get the required information, which is quite often seek by city planners to generate accessible maps. The proposed approach paves the way to generate, in a near term, accessibility maps through the use of point clouds derived from crowdsourced smartphone imagery.

  13. Measuring Social Capital Change Using Ripple Mapping

    ERIC Educational Resources Information Center

    Baker, Barbara; Johannes, Elaine M.

    2013-01-01

    This article provides a detailed description of how to implement a ripple mapping activity to assess youth program effects on community capital and concludes with examples from Maine and Kansas. The maps lead to group reflection on project outcomes and further research and evaluation questions for group members. The results from five Maine…

  14. 10. DETAIL, CAB SIDE. DETAIL, END OF BOOM. DETAIL, LOWER ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. DETAIL, CAB SIDE. DETAIL, END OF BOOM. DETAIL, LOWER PART OF TOWER, SHOWING METAL WHEELS AND CABLE SPOOLS. DETAIL, LOOKING UP AT THE UNDERSIDE OF THE REVOLVING PLATFORM ATOP THE TOWER. - United Engineering Company Shipyard, Crane, 2900 Main Street, Alameda, Alameda County, CA

  15. Algebraic-geometry approach to integrability of birational plane mappings. Integrable birational quadratic reversible mappings. I

    NASA Astrophysics Data System (ADS)

    Rerikh, K. V.

    1998-02-01

    Using classic results of algebraic geometry for birational plane mappings in plane CP 2 we present a general approach to algebraic integrability of autonomous dynamical systems in C 2 with discrete time and systems of two autonomous functional equations for meromorphic functions in one complex variable defined by birational maps in C 2. General theorems defining the invariant curves, the dynamics of a birational mapping and a general theorem about necessary and sufficient conditions for integrability of birational plane mappings are proved on the basis of a new idea — a decomposition of the orbit set of indeterminacy points of direct maps relative to the action of the inverse mappings. A general method of generating integrable mappings and their rational integrals (invariants) I is proposed. Numerical characteristics Nk of intersections of the orbits Φn- kOi of fundamental or indeterminacy points Oi ɛ O ∩ S, of mapping Φn, where O = { O i} is the set of indeterminacy points of Φn and S is a similar set for invariant I, with the corresponding set O' ∩ S, where O' = { O' i} is the set of indeterminacy points of inverse mapping Φn-1, are introduced. Using the method proposed we obtain all nine integrable multiparameter quadratic birational reversible mappings with the zero fixed point and linear projective symmetry S = CΛC-1, Λ = diag(±1), with rational invariants generated by invariant straight lines and conics. The relations of numbers Nk with such numerical characteristics of discrete dynamical systems as the Arnold complexity and their integrability are established for the integrable mappings obtained. The Arnold complexities of integrable mappings obtained are determined. The main results are presented in Theorems 2-5, in Tables 1 and 2, and in Appendix A.

  16. Wide-field lensing mass maps from Dark Energy Survey science verification data: Methodology and detailed analysis

    DOE PAGES

    Vikram, V.

    2015-07-29

    Weak gravitational lensing allows one to reconstruct the spatial distribution of the projected mass density across the sky. These “mass maps” provide a powerful tool for studying cosmology as they probe both luminous and dark matter. In this paper, we present a weak lensing mass map reconstructed from shear measurements in a 139 deg 2 area from the Dark Energy Survey (DES) science verification data. We compare the distribution of mass with that of the foreground distribution of galaxies and clusters. The overdensities in the reconstructed map correlate well with the distribution of optically detected clusters. We demonstrate that candidatemore » superclusters and voids along the line of sight can be identified, exploiting the tight scatter of the cluster photometric redshifts. We cross-correlate the mass map with a foreground magnitude-limited galaxy sample from the same data. Our measurement gives results consistent with mock catalogs from N-body simulations that include the primary sources of statistical uncertainties in the galaxy, lensing, and photo-z catalogs. The statistical significance of the cross-correlation is at the 6.8σ level with 20 arcminute smoothing. We find that the contribution of systematics to the lensing mass maps is generally within measurement uncertainties. In this study, we analyze less than 3% of the final area that will be mapped by the DES; the tools and analysis techniques developed in this paper can be applied to forthcoming larger data sets from the survey.« less

  17. Urban Seismic Hazard Mapping for Memphis, Shelby County, Tennessee

    USGS Publications Warehouse

    Gomberg, Joan

    2006-01-01

    Earthquakes cannot be predicted, but scientists can forecast how strongly the ground is likely to shake as a result of an earthquake. Seismic hazard maps provide one way of conveying such forecasts. The U.S. Geological Survey (USGS), which produces seismic hazard maps for the Nation, is now engaged in developing more detailed maps for vulnerable urban areas. The first set of these maps is now available for Memphis, Tennessee.

  18. EnGeoMAP - geological applications within the EnMAP hyperspectral satellite science program

    NASA Astrophysics Data System (ADS)

    Boesche, N. K.; Mielke, C.; Rogass, C.; Guanter, L.

    2016-12-01

    Hyperspectral investigations from near field to space substantially contribute to geological exploration and mining monitoring of raw material and mineral deposits. Due to their spectral characteristics, large mineral occurrences and minefields can be identified from space and the spatial distribution of distinct proxy minerals be mapped. In the frame of the EnMAP hyperspectral satellite science program a mineral and elemental mapping tool was developed - the EnGeoMAP. It contains a basic mineral mapping and a rare earth element mapping approach. This study shows the performance of EnGeoMAP based on simulated EnMAP data of the rare earth element bearing Mountain Pass Carbonatite Complex, USA, and the Rodalquilar and Lomilla Calderas, Spain, which host the economically relevant gold-silver, lead-zinc-silver-gold and alunite deposits. The mountain pass image data was simulated on the basis of AVIRIS Next Generation images, while the Rodalquilar data is based on HyMap images. The EnGeoMAP - Base approach was applied to both images, while the mountain pass image data were additionally analysed using the EnGeoMAP - REE software tool. The results are mineral and elemental maps that serve as proxies for the regional lithology and deposit types. The validation of the maps is based on chemical analyses of field samples. Current airborne sensors meet the spatial and spectral requirements for detailed mineral mapping and future hyperspectral space borne missions will additionally provide a large coverage. For those hyperspectral missions, EnGeoMAP is a rapid data analysis tool that is provided to spectral geologists working in mineral exploration.

  19. Yang-Baxter maps, discrete integrable equations and quantum groups

    NASA Astrophysics Data System (ADS)

    Bazhanov, Vladimir V.; Sergeev, Sergey M.

    2018-01-01

    For every quantized Lie algebra there exists a map from the tensor square of the algebra to itself, which by construction satisfies the set-theoretic Yang-Baxter equation. This map allows one to define an integrable discrete quantum evolution system on quadrilateral lattices, where local degrees of freedom (dynamical variables) take values in a tensor power of the quantized Lie algebra. The corresponding equations of motion admit the zero curvature representation. The commuting Integrals of Motion are defined in the standard way via the Quantum Inverse Problem Method, utilizing Baxter's famous commuting transfer matrix approach. All elements of the above construction have a meaningful quasi-classical limit. As a result one obtains an integrable discrete Hamiltonian evolution system, where the local equation of motion are determined by a classical Yang-Baxter map and the action functional is determined by the quasi-classical asymptotics of the universal R-matrix of the underlying quantum algebra. In this paper we present detailed considerations of the above scheme on the example of the algebra Uq (sl (2)) leading to discrete Liouville equations, however the approach is rather general and can be applied to any quantized Lie algebra.

  20. WOCAT mapping, GIS and the Góis municipality

    NASA Astrophysics Data System (ADS)

    Esteves, T. C. J.; Soares, J. A. A.; Ferreira, A. J. D.; Coelho, C. O. A.; Carreiras, M. A.; Lynden, G. V.

    2012-04-01

    conservation. The map database and their outputs give a comprehensive and powerful tool to obtain a global vision of the degradation state of a given territory, at the desired local or regional scale. However for the selected study area, the Portuguese Góis Municipality, there was no base information prepared to be readily inserted in the geographical database. It was necessary to create the requested mapping units, so that the WOCAT Mapping questionnaire could be used.As a result, municipal cartography with 39 mapping units was obtained, and for each one, an exhaustive field work was made, allowing to characterize them in detail and answer the required information by WOCAT Mapping. These answers allowed creating a clearer image of what is happening in the territory in what respects to the used techniques, degradation degree and conservation measures applied. The all-important contact with the municipalities main stakeholders is an important aspect to refer, once they are the ones to help validate the obtained results for the WOCAT Mapping methodology, due to their extensive knowledge of the territory.

  1. Yukon Flats National Wildlife Refuge land cover mapping project users guide

    USGS Publications Warehouse

    Markon, Carl J.

    1987-01-01

    The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner (MSS) data and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail obtained from Landsat data was adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

  2. A hybrid genetic linkage map of two ecologically and morphologically divergent Midas cichlid fishes (Amphilophus spp.) obtained by massively parallel DNA sequencing (ddRADSeq).

    PubMed

    Recknagel, Hans; Elmer, Kathryn R; Meyer, Axel

    2013-01-01

    Cichlid fishes are an excellent model system for studying speciation and the formation of adaptive radiations because of their tremendous species richness and astonishing phenotypic diversity. Most research has focused on African rift lake fishes, although Neotropical cichlid species display much variability as well. Almost one dozen species of the Midas cichlid species complex (Amphilophus spp.) have been described so far and have formed repeated adaptive radiations in several Nicaraguan crater lakes. Here we apply double-digest restriction-site associated DNA sequencing to obtain a high-density linkage map of an interspecific cross between the benthic Amphilophus astorquii and the limnetic Amphilophus zaliosus, which are sympatric species endemic to Crater Lake Apoyo, Nicaragua. A total of 755 RAD markers were genotyped in 343 F(2) hybrids. The map resolved 25 linkage groups and spans a total distance of 1427 cM with an average marker spacing distance of 1.95 cM, almost matching the total number of chromosomes (n = 24) in these species. Regions of segregation distortion were identified in five linkage groups. Based on the pedigree of parents to F(2) offspring, we calculated a genome-wide mutation rate of 6.6 × 10(-8) mutations per nucleotide per generation. This genetic map will facilitate the mapping of ecomorphologically relevant adaptive traits in the repeated phenotypes that evolved within the Midas cichlid lineage and, as the first linkage map of a Neotropical cichlid, facilitate comparative genomic analyses between African cichlids, Neotropical cichlids and other teleost fishes.

  3. A Hybrid Genetic Linkage Map of Two Ecologically and Morphologically Divergent Midas Cichlid Fishes (Amphilophus spp.) Obtained by Massively Parallel DNA Sequencing (ddRADSeq)

    PubMed Central

    Recknagel, Hans; Elmer, Kathryn R.; Meyer, Axel

    2013-01-01

    Cichlid fishes are an excellent model system for studying speciation and the formation of adaptive radiations because of their tremendous species richness and astonishing phenotypic diversity. Most research has focused on African rift lake fishes, although Neotropical cichlid species display much variability as well. Almost one dozen species of the Midas cichlid species complex (Amphilophus spp.) have been described so far and have formed repeated adaptive radiations in several Nicaraguan crater lakes. Here we apply double-digest restriction-site associated DNA sequencing to obtain a high-density linkage map of an interspecific cross between the benthic Amphilophus astorquii and the limnetic Amphilophus zaliosus, which are sympatric species endemic to Crater Lake Apoyo, Nicaragua. A total of 755 RAD markers were genotyped in 343 F2 hybrids. The map resolved 25 linkage groups and spans a total distance of 1427 cM with an average marker spacing distance of 1.95 cM, almost matching the total number of chromosomes (n = 24) in these species. Regions of segregation distortion were identified in five linkage groups. Based on the pedigree of parents to F2 offspring, we calculated a genome-wide mutation rate of 6.6 × 10−8 mutations per nucleotide per generation. This genetic map will facilitate the mapping of ecomorphologically relevant adaptive traits in the repeated phenotypes that evolved within the Midas cichlid lineage and, as the first linkage map of a Neotropical cichlid, facilitate comparative genomic analyses between African cichlids, Neotropical cichlids and other teleost fishes. PMID:23316439

  4. A Electronic Map Data Model Based on PDF

    NASA Astrophysics Data System (ADS)

    Zhou, Xiaodong; Yang, Chuncheng; Meng, Nina; Peng, Peng

    2018-05-01

    In this paper, we proposed the PDFEMAP (PDF electronic map) that is a kind of new electronic map products aiming at the current situation and demand of the use of electronic map products. Firstly gives the definition and characteristics of PDFEMAP, followed by a detailed description of the data model and method for generating PDFEMAP, and finally expounds application modes of the PDFEMAP which feasibility and effectiveness are verified.

  5. A land-cover map for South and Southeast Asia derived from SPOT-VEGETATION data

    USGS Publications Warehouse

    Stibig, H.-J.; Belward, A.S.; Roy, P.S.; Rosalina-Wasrin, U.; Agrawal, S.; Joshi, P.K.; ,; Beuchle, R.; Fritz, S.; Mubareka, S.; Giri, C.

    2007-01-01

    Aim  Our aim was to produce a uniform ‘regional’ land-cover map of South and Southeast Asia based on ‘sub-regional’ mapping results generated in the context of the Global Land Cover 2000 project.Location  The ‘region’ of tropical and sub-tropical South and Southeast Asia stretches from the Himalayas and the southern border of China in the north, to Sri Lanka and Indonesia in the south, and from Pakistan in the west to the islands of New Guinea in the far east.Methods  The regional land-cover map is based on sub-regional digital mapping results derived from SPOT-VEGETATION satellite data for the years 1998–2000. Image processing, digital classification and thematic mapping were performed separately for the three sub-regions of South Asia, continental Southeast Asia, and insular Southeast Asia. Landsat TM images, field data and existing national maps served as references. We used the FAO (Food and Agriculture Organization) Land Cover Classification System (LCCS) for coding the sub-regional land-cover classes and for aggregating the latter to a uniform regional legend. A validation was performed based on a systematic grid of sample points, referring to visual interpretation from high-resolution Landsat imagery. Regional land-cover area estimates were obtained and compared with FAO statistics for the categories ‘forest’ and ‘cropland’.Results  The regional map displays 26 land-cover classes. The LCCS coding provided a standardized class description, independent from local class names; it also allowed us to maintain the link to the detailed sub-regional land-cover classes. The validation of the map displayed a mapping accuracy of 72% for the dominant classes of ‘forest’ and ‘cropland’; regional area estimates for these classes correspond reasonably well to existing regional statistics.Main conclusions  The land-cover map of South and Southeast Asia provides a synoptic view of the distribution of land cover of tropical and sub

  6. Stability and chaos of Rulkov map-based neuron network with electrical synapse

    NASA Astrophysics Data System (ADS)

    Wang, Caixia; Cao, Hongjun

    2015-02-01

    In this paper, stability and chaos of a simple system consisting of two identical Rulkov map-based neurons with the bidirectional electrical synapse are investigated in detail. On the one hand, as a function of control parameters and electrical coupling strengthes, the conditions for stability of fixed points of this system are obtained by using the qualitative analysis. On the other hand, chaos in the sense of Marotto is proved by a strict mathematical way. These results could be useful for building-up large-scale neurons networks with specific dynamics and rich biophysical phenomena.

  7. Applied cartographic communication: map symbolization for atlases.

    USGS Publications Warehouse

    Morrison, J.L.

    1984-01-01

    A detailed investigation of the symbolization used on general-purpose atlas reference maps. It indicates how theories of cartographic communication can be put into practice. Two major points emerge. First, that a logical scheme can be constructed from existing cartographic research and applied to an analysis of the choice of symbolization on a map. Second, the same structure appears to allow the cartographer to specify symbolization as a part of map design. An introductory review of cartographic communication is followed by an analysis of selected maps' usage of point, area and line symbols, boundaries, text and colour usage.-after Author

  8. Hazard Maps in the Classroom.

    ERIC Educational Resources Information Center

    Cross, John A.

    1988-01-01

    Emphasizes the use of geophysical hazard maps and illustrates how they can be used in the classroom from kindergarten to college level. Depicts ways that hazard maps of floods, landslides, earthquakes, volcanoes, and multi-hazards can be integrated into classroom instruction. Tells how maps may be obtained. (SLM)

  9. Digital files for northeast Asia geodynamics, mineral deposit location, and metallogenic belt maps, stratigraphic columns, descriptions of map units, and descriptions of metallogenic belts

    USGS Publications Warehouse

    Nokleberg, Warren J.; Badarch, Gombosuren; Berzin, Nikolai A.; Diggles, Michael F.; Hwang, Duk-Hwan; Khanchuk, Alexander I.; Miller, Robert J.; Naumova, Vera V.; Obolensky, Alexander A.; Ogasawara, Masatsugu; Parfenov, Leonid M.; Prokopiev, Andrei V.; Rodionov, Sergey M.; Yan, Hongquan

    2004-01-01

    This is the online version of a CD-ROM publication. It contains all of the data that are on the disc but extra files have been removed: index files, software installers, and Windows autolaunch files. This publication contains a a series of files for Northeast Asia geodynamics, mineral deposit location, and metallogenic belt maps descriptions of map units and metallogenic belts, and stratigraphic columns. This region includes Eastern Siberia, Russian Far East, Mongolia, Northeast China, South Korea, and Japan. The files include: (1) a geodynamics map at a scale of 1:5,000,000; (2) page-size stratigraphic columns for major terranes; (3) a generalized geodynamics map at a scale of 1:15,000,000; (4) a mineral deposit location map at a scale of 1:7,500,000; (5) metallogenic belt maps at a scale of 1:15,000,000; (6) detailed descriptions of geologic units with references; (7) detailed descriptions of metallogenic belts with references; and (8) summary mineral deposit and metallogenic belt tables. The purpose of this publication is to provide high-quality, digital graphic files for maps and figures, and Word files for explanations, descriptions, and references to customers and users.

  10. Regional mapping of soil parent material by machine learning based on point data

    NASA Astrophysics Data System (ADS)

    Lacoste, Marine; Lemercier, Blandine; Walter, Christian

    2011-10-01

    A machine learning system (MART) has been used to predict soil parent material (SPM) at the regional scale with a 50-m resolution. The use of point-specific soil observations as training data was tested as a replacement for the soil maps introduced in previous studies, with the aim of generating a more even distribution of training data over the study area and reducing information uncertainty. The 27,020-km 2 study area (Brittany, northwestern France) contains mainly metamorphic, igneous and sedimentary substrates. However, superficial deposits (aeolian loam, colluvial and alluvial deposits) very often represent the actual SPM and are typically under-represented in existing geological maps. In order to calibrate the predictive model, a total of 4920 point soil descriptions were used as training data along with 17 environmental predictors (terrain attributes derived from a 50-m DEM, as well as emissions of K, Th and U obtained by means of airborne gamma-ray spectrometry, geological variables at the 1:250,000 scale and land use maps obtained by remote sensing). Model predictions were then compared: i) during SPM model creation to point data not used in model calibration (internal validation), ii) to the entire point dataset (point validation), and iii) to existing detailed soil maps (external validation). The internal, point and external validation accuracy rates were 56%, 81% and 54%, respectively. Aeolian loam was one of the three most closely predicted substrates. Poor prediction results were associated with uncommon materials and areas with high geological complexity, i.e. areas where existing maps used for external validation were also imprecise. The resultant predictive map turned out to be more accurate than existing geological maps and moreover indicated surface deposits whose spatial coverage is consistent with actual knowledge of the area. This method proves quite useful in predicting SPM within areas where conventional mapping techniques might be too

  11. Atmospheric and surface properties of Mars obtained by infrared spectroscopy on Mariner 9

    NASA Technical Reports Server (NTRS)

    Conrath, B.; Curran, R. J.; Hanel, R.; Kunde, V. G.; Marguire, W.; Pearl, J.; Pirraglia, J. A.; Welker, J.; Burke, T.

    1972-01-01

    During the eleven month operational lifetime of Mariner 9, the infrared spectroscopy experiment obtained data over a large portion of Mars. Recently obtained spectra indicate that strong seasonal variations in the water vapor distribution over both polar regions occurred. The wettest atmospheric conditions observed so far contain 20 to 30 precipitable microns of water over the north polar cap during northern spring. A low resolution pressure map is presented which covers that portion of the planet between latitudes -60 deg and +25 deg. A more detailed study of the Coprates canyon indicates that at its lowest point the canyon floor must be at least 5 km below the rim. Applications of tidal theory to temperature fields derived from the spectra indicate diurnal surface pressure fluctuations of as much as 12 percent during the great dust storm of 1971-72. Qualitative arguments based on radiative transfer calculations for model dust clouds composed of spherical quartz particles suggest that particle radii during the storm were of the order of a few microns.

  12. Interpretation of detailed aerial gamma-ray survey, Jabal Ashirah area, southeastern Arabian Shield, Kingdom of Saudi Arabia

    USGS Publications Warehouse

    Duval, J.S.

    1987-01-01

    A detailed aerial gamma-ray spectrometric survey of the Jabal Ashirah area in the southeastern Arabian Shield has been analyzed using computer-classification algorithms. The analysis resulted in maps that show radiometric map units and gamma-ray anomalies indicating the presence of possible concentrations of potassium and uranium. The radiometric-unit map was interpreted to 'produce a simplified radiolithic map that was correlated with the mapped geology. The gamma-ray data show uranium anomalies that coincide with a tin-bearing granite, but known gold and nickel mineralization do not have any associated gamma-ray signatures.

  13. 12. Photocopy of map. Original in library of Lehmann Building, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. Photocopy of map. Original in library of Lehmann Building, Missouri Botanical Garden. DETAIL OF MAP DRAWN AND ENGRAVED BY FRANCIS TUNICA IN 1865 - Missouri Botanical Garden, 2345 Tower Grove Avenue, Saint Louis, Independent City, MO

  14. Molecular mapping within the mouse albino-deletion complex.

    PubMed Central

    Johnson, D K; Hand, R E; Rinchik, E M

    1989-01-01

    Induced germ-line deletion mutations in the mouse provide a malleable experimental system for in-depth molecular and functional analysis of large segments of the mammalian genome. To obtain an initial bank of molecular probes for the region of mouse chromosome 7 associated with the albino-deletion complex, random anonymous DNA clones, derived from a library constructed from flow-sorted chromosomes, were screened on DNAs from Mus musculus-Mus spretus F1 hybrids carrying large, multilocus, lethal albino deletions. Clones falling within a given deletion interval can easily be recognized because hybridization bands that represent restriction fragment length polymorphisms specific for the mutant (deleted) chromosome inherited from the M. musculus parent will be absent. Among 72 informative clones used as probes, one, which defines the locus D7OR1, mapped within two deletions that are 6-11 centimorgans in length. Submapping of this anonymous clone across a panel of 27 smaller deletions localized D7OR1 distal to a chromosomal subregion important for survival of the preimplantation embryo, proximal to globin [beta-chain (Hbb)], and near the shaker-1 (sh-1) locus. The results of these deletion-mapping experiments were also confirmed by standard three-point linkage analysis. This strategy for selection and rapid mapping of anonymous DNA probes to chromosomal segments corresponding to germ-line deletion mutations should contribute to the generation of more detailed physical and functional maps of genomic regions associated with mutant developmental phenotypes. Images PMID:2813427

  15. Perspectives on the methods of a large systematic mapping of maternal health interventions.

    PubMed

    Chersich, Matthew; Becerril-Montekio, Victor; Becerra-Posada, Francisco; Dumbaugh, Mari; Kavanagh, Josephine; Blaauw, Duane; Thwala, Siphiwe; Kern, Elinor; Penn-Kekana, Loveday; Vargas, Emily; Mlotshwa, Langelihle; Dhana, Ashar; Mannava, Priya; Portela, Anayda; Tristan, Mario; Rees, Helen; Bijlmakers, Leon

    2016-08-25

    Mapping studies describe a broad body of literature, and differ from classical systematic reviews, which assess more narrowly-defined questions and evaluate the quality of the studies included in the review. While the steps involved in mapping studies have been described previously, a detailed qualitative account of the methodology could inform the design of future mapping studies. Describe the perspectives of a large research team on the methods used and collaborative experiences in a study that mapped the literature published on maternal health interventions in low- and middle-income countries (2292 full text articles included, after screening 35,048 titles and abstracts in duplicate). Fifteen members of the mapping team, drawn from eight countries, provided their experiences and perspectives of the study in response to a list of questions and probes. The responses were collated and analysed thematically following a grounded theory approach. The objectives of the mapping evolved over time, posing difficulties in ensuring a uniform understanding of the purpose of the mapping among the team members. Ambiguity of some study variables and modifications in data extraction codes were the main threats to the quality of data extraction. The desire for obtaining detailed information on a few topics needed to be weighed against the benefits of collecting more superficial data on a wider range of topics. Team members acquired skills in systematic review methodology and software, and a broad knowledge of maternal health literature. Participation in analysis and dissemination was lower than during the screening of articles for eligibility and data coding. Though all respondents believed the workload involved was high, study outputs were viewed as novel and important contributions to evidence. Overall, most believed there was a favourable balance between the amount of work done and the project's outputs. A large mapping of literature is feasible with a committed team aiming to

  16. Challenges for circumpolar landcover mapping with remotely sensed data

    NASA Astrophysics Data System (ADS)

    Bartsch, A.; Widhalm, B.; Höfler, A.; Kroisleitner, C.; Trofaier, A. M.

    2016-12-01

    The European Space Agency has launched the GlobPermafrost initiative (2016-2019) to develop, validate and implement information products to support the research communities and related international organizations in their work on understanding permafrost better by integration of Earth Observation data. One of the challenges is to develop a land cover map which can be used to address permafrost related questions. Many applications in the Arctic require higher thematic detail than available in global maps to date. There exist a range of regional land cover maps which have been developed for e.g. upscaling of methane fluxes or soil organic carbon content in permafrost regions and demonstrate the suitability of satellite data. Widely used is the CAVM (Circum Arctic Vegetation map, Walker et al. 2005) as it offers a for many applications sufficient thematic detail. It is however confined to areas north of the tree line. Global land cover maps have been assessed based on the CAVM. Shrub and dwarf-shrub tundra are mostly classified as `Sparse vegetation'. Usually 50-60% of the area north of the tree line are represented by this class. Wetland areas are in general not well represented. This cannot only be explained with the insufficient spatial resolution since the CAVM is also based on medium resolution (1km) data. Required thematic detail and weaknesses of existing global landcover maps are discussed in the context of permafrost related processes across scales and the potential for improvement with/ added information of SAR data for this purpose is assessed.

  17. Interpretive geologic bedrock map of the Tanana B-1 Quadrangle, Central Alaska

    USGS Publications Warehouse

    Reifenstuh, Rocky R.; Dover, James H.; Newberry, Rainer J.; Calutice, Karen H.; Liss, Shirley A.; Blodgett, Robert B.; Budtzen, Thomas K.; Weber, Florence R.

    1997-01-01

    This report provides detailed (1:63,360-scale) mapping of the Tanana B-1 Quadrangle (250 square miles; equivalent to four 7.5 minute quadrangles). The area is part of the Manley Hot Springs-Tofty mining districts and adjacent to the Rampart mining district to the north of the Tanana A-1 and A-2 Quadrangles. This report includes detailed bedrock, structural, stratigraphic, and geochronologic data. Based on the resulting geologic maps, field investigations, and laboratory materials analyses, the project has also generated derivative maps of geologic construction materials and geologic hazards.

  18. The Role of Geologic Mapping in NASA PDSI Planning

    NASA Astrophysics Data System (ADS)

    Williams, D. A.; Skinner, J. A.; Radebaugh, J.

    2017-12-01

    Geologic mapping is an investigative process designed to derive the geologic history of planetary objects at local, regional, hemispheric or global scales. Geologic maps are critical products that aid future exploration by robotic spacecraft or human missions, support resource exploration, and provide context for and help guide scientific discovery. Creation of these tools, however, can be challenging in that, relative to their terrestrial counterparts, non-terrestrial planetary geologic maps lack expansive field-based observations. They rely, instead, on integrating diverse data types wth a range of spatial scales and areal coverage. These facilitate establishment of geomorphic and geologic context but are generally limited with respect to identifying outcrop-scale textural details and resolving temporal and spatial changes in depositional environments. As a result, planetary maps should be prepared with clearly defined contact and unit descriptions as well as a range of potential interpretations. Today geologic maps can be made from images obtained during the traverses of the Mars rovers, and for every new planetary object visited by NASA orbital or flyby spacecraft (e.g., Vesta, Ceres, Titan, Enceladus, Pluto). As Solar System Exploration develops and as NASA prepares to send astronauts back to the Moon and on to Mars, the importance of geologic mapping will increase. In this presentation, we will discuss the past role of geologic mapping in NASA's planetary science activities and our thoughts on the role geologic mapping will have in exploration in the coming decades. Challenges that planetary mapping must address include, among others: 1) determine the geologic framework of all Solar System bodies through the systematic development of geologic maps at appropriate scales, 2) develop digital Geographic Information Systems (GIS)-based mapping techniques and standards to assist with communicating map information to the scientific community and public, 3) develop

  19. Maps of Quaternary Deposits and Liquefaction Susceptibility in the Central San Francisco Bay Region, California

    USGS Publications Warehouse

    Witter, Robert C.; Knudsen, Keith L.; Sowers, Janet M.; Wentworth, Carl M.; Koehler, Richard D.; Randolph, Carolyn E.; Brooks, Suzanna K.; Gans, Kathleen D.

    2006-01-01

    This report presents a map and database of Quaternary deposits and liquefaction susceptibility for the urban core of the San Francisco Bay region. It supercedes the equivalent area of U.S. Geological Survey Open-File Report 00-444 (Knudsen and others, 2000), which covers the larger 9-county San Francisco Bay region. The report consists of (1) a spatial database, (2) two small-scale colored maps (Quaternary deposits and liquefaction susceptibility), (3) a text describing the Quaternary map and liquefaction interpretation (part 3), and (4) a text introducing the report and describing the database (part 1). All parts of the report are digital; part 1 describes the database and digital files and how to obtain them by downloading across the internet. The nine counties surrounding San Francisco Bay straddle the San Andreas fault system, which exposes the region to serious earthquake hazard (Working Group on California Earthquake Probabilities, 1999). Much of the land adjacent to the Bay and the major rivers and streams is underlain by unconsolidated deposits that are particularly vulnerable to earthquake shaking and liquefaction of water-saturated granular sediment. This new map provides a consistent detailed treatment of the central part of the 9-county region in which much of the mapping of Open-File Report 00-444 was either at smaller (less detailed) scale or represented only preliminary revision of earlier work. Like Open-File Report 00-444, the current mapping uses geomorphic expression, pedogenic soils, inferred depositional environments, and geologic age to define and distinguish the map units. Further scrutiny of the factors controlling liquefaction susceptibility has led to some changes relative to Open-File Report 00-444: particularly the reclassification of San Francisco Bay mud (Qhbm) to have only MODERATE susceptibility and the rating of artificial fills according to the Quaternary map units inferred to underlie them (other than dams - adf). The two colored

  20. Preliminary integrated geologic map databases for the United States: Digital data for the reconnaissance geologic map of the western Aleutian Islands, Alaska

    USGS Publications Warehouse

    ,

    2006-01-01

    The growth in the use of Geographic Information Systems (GIS) has highlighted the need for digital geologic maps that have been attributed with information about age and lithology. Such maps can be conveniently used to generate derivative maps for manifold special purposes such as mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This report is part of a series of integrated geologic map databases that cover the entire United States. Three national-scale geologic maps that portray most or all of the United States already exist; for the conterminous U.S., King and Beikman (1974a,b) compiled a map at a scale of 1:2,500,000, Beikman (1980) compiled a map for Alaska at 1:2,500,000 scale, and for the entire U.S., Reed and others (2005a,b) compiled a map at a scale of 1:5,000,000. A digital version of the King and Beikman map was published by Schruben and others (1994). Reed and Bush (2004) produced a digital version of the Reed and others (2005a) map for the conterminous U.S. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. The digital geologic maps presented here are in a standardized format as ARC/INFO Exportfiles/ and as ArcView shape files. Data tables that relate the map units to detailed lithologic and age information accompany these GIS files. The map is delivered as a set 1:250,000-scale quadrangle files. To the best of our ability, these quadrangle files are edge-matched with respect to geology. When the maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps.

  1. As-built design specification for segment map (Sgmap) program

    NASA Technical Reports Server (NTRS)

    Tompkins, M. A. (Principal Investigator)

    1981-01-01

    The segment map program (SGMAP), which is part of the CLASFYT package, is described in detail. This program is designed to output symbolic maps or numerical dumps from LANDSAT cluster/classification files or aircraft ground truth/processed ground truth files which are in 'universal' format.

  2. Heat capacity mapping radiometer for AEM spacecraft

    NASA Technical Reports Server (NTRS)

    Sonnek, G. E.

    1977-01-01

    The operation, maintenance, and integration of the applications explorer mission heat capacity mapping radiometer is illustrated in block diagrams and detail schematics of circuit functions. Data format and logic timing diagrams are included along with radiometric and electronic calibration data. Mechanical and electrical configuration is presented to provide interface details for integration of the HCMR instrument to AEM spacecraft.

  3. Mariner 9 mapping science sequence design.

    NASA Technical Reports Server (NTRS)

    Goldman, A. M., Jr.

    1973-01-01

    The primary mission of Mariner 9 was to map the Martian surface. This paper discusses in detail the design of the mapping science sequences which were executed by the spacecraft in sixty days and during which over eighty percent of the surface was photographed. The sequence design was influenced by many factors: experimenter scientific objectives, instrument capabilities, spacecraft capabilities, orbit characteristics, and data return rates, which are illustrated graphically. Typical orbits are depicted for each of the three different mapping phases lasting twenty days. Examples of typical orbital sequence plans prepared daily during mission operations are given.

  4. Large landslides associated with a diapiric fold in Canelles Reservoir (Spanish Pyrenees): Detailed geological-geomorphological mapping, trenching and electrical resistivity imaging

    NASA Astrophysics Data System (ADS)

    Gutiérrez, Francisco; Linares, Rogelio; Roqué, Carles; Zarroca, Mario; Carbonel, Domingo; Rosell, Joan; Gutiérrez, Mateo

    2015-07-01

    Detailed geomorphological-geological mapping in Canelles Reservoir, the Spanish Pyrenees, reveals the presence of several large landslides overlooked in previous cartographic works. One of the slope movements, designated as the Canelles landslide, corresponds to a 40 × 106 m3 translational landslide reactivated in 2006 by a severe decline in the reservoir water level. The geomorphic features mapped in the upper part of the Canelles landslide, including surface ruptures corroborated by electrical resistivity imaging and trenching, indicate multiple displacement episodes previous to the 2006 human-induced event. Consistently, the stratigraphic and structural relationships observed in a trench record at least two displacement events older and larger in magnitude than the 2006 reactivation. The oldest recorded event occurred in the 6th to 7th Centuries and the second in 1262-1679 yr AD. This latter episode might be correlative to the 1373 Ribagorza earthquake (Mw 6.2), which caused the reactivation of a landslide and the consequent destruction of a village in the adjacent valley. The available data indicate that over more than one millennium the kinematics of the landslide has been characterised by discrete small-displacement episodes. These data, together with the available literature on rapid rockslides, do not concur with the acceleration predicted by modelling in a previous investigation, which foresees a speed of 16 m s- 1 despite the low average dip of the sliding surface (9-10°). This case study illustrates that the trenching technique may provide valuable practical information on the past behaviour of landslides, covering a much broader time span than instrumental and historical records.

  5. Tetrahymena micronuclear genome mapping. a high-resolution meiotic map of chromosome 1l.

    PubMed

    Wickert, S; Orias, E

    2000-03-01

    The ciliate Tetrahymena thermophila is a useful model organism that combines diverse experimental advantages with powerful capabilities for genetic manipulation. The genetics of Tetrahymena are especially rich among eukaryotic cells, because it possesses two distinct but related nuclear genomes within one cytoplasm, contained separately in the micronucleus (MIC) and the macronucleus (MAC). In an effort to advance fulfillment of Tetrahymena's potential as a genetic system, we are mapping both genomes and investigating the correspondence between them. With the latter goal especially in mind, we report here a high-resolution meiotic linkage map of the left arm of chromosome 1, one of Tetrahymena's five chromosomes. The map consists of 40 markers, with an average spacing of 2.3 cM in the Haldane function and a total length of 88.6 cM. This study represents the first mapping of any large region of the Tetrahymena genome that has been done at this level of detail. Results of a parallel mapping effort in the macronucleus, and the correspondence between the two genomes, can be found in this issue as a companion to this article.

  6. Fuzzy C-Means Algorithm for Segmentation of Aerial Photography Data Obtained Using Unmanned Aerial Vehicle

    NASA Astrophysics Data System (ADS)

    Akinin, M. V.; Akinina, N. V.; Klochkov, A. Y.; Nikiforov, M. B.; Sokolova, A. V.

    2015-05-01

    The report reviewed the algorithm fuzzy c-means, performs image segmentation, give an estimate of the quality of his work on the criterion of Xie-Beni, contain the results of experimental studies of the algorithm in the context of solving the problem of drawing up detailed two-dimensional maps with the use of unmanned aerial vehicles. According to the results of the experiment concluded that the possibility of applying the algorithm in problems of decoding images obtained as a result of aerial photography. The considered algorithm can significantly break the original image into a plurality of segments (clusters) in a relatively short period of time, which is achieved by modification of the original k-means algorithm to work in a fuzzy task.

  7. Mixing rates and limit theorems for random intermittent maps

    NASA Astrophysics Data System (ADS)

    Bahsoun, Wael; Bose, Christopher

    2016-04-01

    We study random transformations built from intermittent maps on the unit interval that share a common neutral fixed point. We focus mainly on random selections of Pomeu-Manneville-type maps {{T}α} using the full parameter range 0<α <∞ , in general. We derive a number of results around a common theme that illustrates in detail how the constituent map that is fastest mixing (i.e. smallest α) combined with details of the randomizing process, determines the asymptotic properties of the random transformation. Our key result (theorem 1.1) establishes sharp estimates on the position of return time intervals for the quenched dynamics. The main applications of this estimate are to limit laws (in particular, CLT and stable laws, depending on the parameters chosen in the range 0<α <1 ) for the associated skew product; these are detailed in theorem 3.2. Since our estimates in theorem 1.1 also hold for 1≤slant α <∞ we study a second class of random transformations derived from piecewise affine Gaspard-Wang maps, prove existence of an infinite (σ-finite) invariant measure and study the corresponding correlation asymptotics. To the best of our knowledge, this latter kind of result is completely new in the setting of random transformations.

  8. Geologic map of Detrital, Hualapai, and Sacramento Valleys and surrounding areas, northwest Arizona

    USGS Publications Warehouse

    Beard, L. Sue; Kennedy, Jeffrey; Truini, Margot; Felger, Tracey

    2011-01-01

    A 1:250,000-scale geologic map and report covering the Detrital, Hualapai, and Sacramento valleys in northwest Arizona is presented for the purpose of improving understanding of the geology and geohydrology of the basins beneath those valleys. The map was compiled from existing geologic mapping, augmented by digital photogeologic reconnaissance mapping. The most recent geologic map for the area, and the only digital one, is the 1:1,000,000-scale Geologic Map of Arizona. The larger scale map presented here includes significantly more detailed geology than the Geologic Map of Arizona in terms of accuracy of geologic unit contacts, number of faults, fault type, fault location, and details of Neogene and Quaternary deposits. Many sources were used to compile the geology; the accompanying geodatabase includes a source field in the polygon feature class that lists source references for polygon features. The citations for the source field are included in the reference section.

  9. Mapping anatomical correlations across cerebral cortex (MACACC) using cortical thickness from MRI.

    PubMed

    Lerch, Jason P; Worsley, Keith; Shaw, W Philip; Greenstein, Deanna K; Lenroot, Rhoshel K; Giedd, Jay; Evans, Alan C

    2006-07-01

    We introduce MACACC-Mapping Anatomical Correlations Across Cerebral Cortex-to study correlated changes within and across different cortical networks. The principal topic of investigation is whether the thickness of one area of the cortex changes in a statistically correlated fashion with changes in thickness of other cortical regions. We further extend these methods by introducing techniques to test whether different population groupings exhibit significantly varying MACACC patterns. The methods are described in detail and applied to a normal childhood development population (n = 292), and show that association cortices have the highest correlation strengths. Taking Brodmann Area (BA) 44 as a seed region revealed MACACC patterns strikingly similar to tractography maps obtained from diffusion tensor imaging. Furthermore, the MACACC map of BA 44 changed with age, older subjects featuring tighter correlations with BA 44 in the anterior portions of the superior temporal gyri. Lastly, IQ-dependent MACACC differences were investigated, revealing steeper correlations between BA 44 and multiple frontal and parietal regions for the higher IQ group, most significantly (t = 4.0) in the anterior cingulate.

  10. Contrast-detail phantom scoring methodology.

    PubMed

    Thomas, Jerry A; Chakrabarti, Kish; Kaczmarek, Richard; Romanyukha, Alexander

    2005-03-01

    Published results of medical imaging studies which make use of contrast detail mammography (CDMAM) phantom images for analysis are difficult to compare since data are often not analyzed in the same way. In order to address this situation, the concept of ideal contrast detail curves is suggested. The ideal contrast detail curves are constructed based on the requirement of having the same product of the diameter and contrast (disk thickness) of the minimal correctly determined object for every row of the CDMAM phantom image. A correlation and comparison of five different quality parameters of the CDMAM phantom image determined for obtained ideal contrast detail curves is performed. The image quality parameters compared include: (1) contrast detail curve--a graph correlation between "minimal correct reading" diameter and disk thickness; (2) correct observation ratio--the ratio of the number of correctly identified objects to the actual total number of objects multiplied by 100; (3) image quality figure--the sum of the product of the diameter of the smallest scored object and its relative contrast; (4) figure-of-merit--the zero disk diameter value obtained from extrapolation of the contrast detail curve to the origin (e.g., zero disk diameter); and (5) k-factor--the product of the thickness and the diameter of the smallest correctly identified disks. The analysis carried out showed the existence of a nonlinear relationship between the above parameters, which means that use of different parameters of CDMAM image quality potentially can cause different conclusions about changes in image quality. Construction of the ideal contrast detail curves for CDMAM phantom is an attempt to determine the quantitative limits of the CDMAM phantom as employed for image quality evaluation. These limits are determined by the relationship between certain parameters of a digital mammography system and the set of the gold disks sizes in the CDMAM phantom. Recommendations are made on

  11. Reconstruction of spatially detailed global map of NH4+ and NO3- application in synthetic nitrogen fertilizer

    NASA Astrophysics Data System (ADS)

    Nishina, Kazuya; Ito, Akihiko; Hanasaki, Naota; Hayashi, Seiji

    2017-02-01

    Currently, available historical global N fertilizer map as an input data to global biogeochemical model is still limited and existing maps were not considered NH4+ and NO3- in the fertilizer application rates. This paper provides a method for constructing a new historical global nitrogen fertilizer application map (0.5° × 0.5° resolution) for the period 1961-2010 based on country-specific information from Food and Agriculture Organization statistics (FAOSTAT) and various global datasets. This new map incorporates the fraction of NH4+ (and NO3-) in N fertilizer inputs by utilizing fertilizer species information in FAOSTAT, in which species can be categorized as NH4+- and/or NO3--forming N fertilizers. During data processing, we applied a statistical data imputation method for the missing data (19 % of national N fertilizer consumption) in FAOSTAT. The multiple imputation method enabled us to fill gaps in the time-series data using plausible values using covariates information (year, population, GDP, and crop area). After the imputation, we downscaled the national consumption data to a gridded cropland map. Also, we applied the multiple imputation method to the available chemical fertilizer species consumption, allowing for the estimation of the NH4+ / NO3- ratio in national fertilizer consumption. In this study, the synthetic N fertilizer inputs in 2000 showed a general consistency with the existing N fertilizer map (Potter et al., 2010) in relation to the ranges of N fertilizer inputs. Globally, the estimated N fertilizer inputs based on the sum of filled data increased from 15 to 110 Tg-N during 1961-2010. On the other hand, the global NO3- input started to decline after the late 1980s and the fraction of NO3- in global N fertilizer decreased consistently from 35 to 13 % over a 50-year period. NH4+-forming fertilizers are dominant in most countries; however, the NH4+ / NO3- ratio in N fertilizer inputs shows clear differences temporally and geographically. This

  12. Geologic map of the Maumee quadrangle, Searcy and Marion Counties, Arkansas

    USGS Publications Warehouse

    Turner, Kenzie J.; Hudson, Mark R.

    2010-01-01

    This map summarizes the geology of the Maumee 7.5-minute quadrangle in northern Arkansas. The map area is in the Ozark plateaus region on the southern flank of the Ozark dome. The Springfield Plateau, composed of Mississippian cherty limestone, overlies the Salem Plateau, composed of Ordovician carbonate and clastic rocks, with areas of Silurian rocks in between. Erosion related to the Buffalo River and its tributaries, Tomahawk, Water, and Dry Creeks, has exposed a 1,200-ft-thick section of Mississippian, Silurian, and Ordovician rocks mildly deformed by faults and folds. An approximately 130-mile-long corridor along the Buffalo River forms the Buffalo National River that is administered by the National Park Service. McKnight (1935) mapped the geology of the Maumee quadrangle as part of a larger 1:125,000-scale map focused on understanding the lead and zinc deposits common in the area. Detailed new mapping for this study was compiled using a Geographic Information System (GIS) at 1:24,000 scale. Site location and elevation were obtained by using a Global Positioning Satellite (GPS) receiver in conjunction with a U.S. Geological Survey 7.5-minute topographic map and barometric altimeter. U.S. Geological Survey 10-m digital elevation model data were used to derive a hill-shade-relief map used along with digital orthophotographs to map ledge-forming units between field sites. Bedding attitudes were measured in drainage bottoms and on well-exposed ledges. Bedding measured at less than 2 degree dip is indicated as horizontal. Structure contours constructed for the base of the Boone Formation are constrained by field-determined elevations on both upper and lower formation contacts.

  13. Geodynamics map of northeast Asia

    USGS Publications Warehouse

    Parfenov, Leonid M.; Khanchuk, Alexander I.; Badarch, Gombosuren; Miller, Robert J.; Naumova, Vera V.; Nokleberg, Warren J.; Ogasawara, Masatsugu; Prokopiev, Andrei V.; Yan, Hongquan

    2013-01-01

    This map portrays the geodynamics of Northeast Asia at a scale of 1:5,000,000 using the concepts of plate tectonics and analysis of terranes and overlap assemblages. The map is the result of a detailed compilation and synthesis at 5 million scale and is part of a major international collaborative study of the mineral resources, metallogenesis, and tectonics of northeast Asia conducted from 1997 through 2002 by geologists from earth science agencies and universities in Russia, Mongolia, northeastern China, South Korea, Japan, and the USA.

  14. Topographic maps: Tools for planning

    USGS Publications Warehouse

    Kaufman, George A.

    1980-01-01

    Topographic maps are a detailed record of a land area, giving geographic positions and elevations for both natural and man-made features. They show the shape of the land the mountains, valleys, and plains by means of brown contour lines (lines of equal elevation above sea level). In steep mountainous areas, contours are closely spaced; in flatter areas, they are far apart. The elevation of any point on the map can be estimated by referring to the elevations of the contour lines above and below it.

  15. Transmission and visualization of large geographical maps

    NASA Astrophysics Data System (ADS)

    Zhang, Liqiang; Zhang, Liang; Ren, Yingchao; Guo, Zhifeng

    Transmission and visualization of large geographical maps have become a challenging research issue in GIS applications. This paper presents an efficient and robust way to simplify large geographical maps using frame buffers and Voronoi diagrams. The topological relationships are kept during the simplification by removing the Voronoi diagram's self-overlapped regions. With the simplified vector maps, we establish different levels of detail (LOD) models of these maps. Then we introduce a client/server architecture which integrates our out-of-core algorithm, progressive transmission and rendering scheme based on computer graphics hardware. The architecture allows the viewers to view different regions interactively at different LODs on the network. Experimental results show that our proposed scheme provides an effective way for powerful transmission and manipulation of large maps.

  16. A comprehensive map of the influenza A virus replication cycle

    PubMed Central

    2013-01-01

    Background Influenza is a common infectious disease caused by influenza viruses. Annual epidemics cause severe illnesses, deaths, and economic loss around the world. To better defend against influenza viral infection, it is essential to understand its mechanisms and associated host responses. Many studies have been conducted to elucidate these mechanisms, however, the overall picture remains incompletely understood. A systematic understanding of influenza viral infection in host cells is needed to facilitate the identification of influential host response mechanisms and potential drug targets. Description We constructed a comprehensive map of the influenza A virus (‘IAV’) life cycle (‘FluMap’) by undertaking a literature-based, manual curation approach. Based on information obtained from publicly available pathway databases, updated with literature-based information and input from expert virologists and immunologists, FluMap is currently composed of 960 factors (i.e., proteins, mRNAs etc.) and 456 reactions, and is annotated with ~500 papers and curation comments. In addition to detailing the type of molecular interactions, isolate/strain specific data are also available. The FluMap was built with the pathway editor CellDesigner in standard SBML (Systems Biology Markup Language) format and visualized as an SBGN (Systems Biology Graphical Notation) diagram. It is also available as a web service (online map) based on the iPathways+ system to enable community discussion by influenza researchers. We also demonstrate computational network analyses to identify targets using the FluMap. Conclusion The FluMap is a comprehensive pathway map that can serve as a graphically presented knowledge-base and as a platform to analyze functional interactions between IAV and host factors. Publicly available webtools will allow continuous updating to ensure the most reliable representation of the host-virus interaction network. The FluMap is available at http

  17. Landsat applied to landslide mapping

    NASA Technical Reports Server (NTRS)

    Sauchyn, D. J.; Trench, N. R.

    1978-01-01

    A variety of features characteristic of rotational landslides may be identified on Landsat imagery. These include tonal mottling, tonal banding, major and secondary scarps, and ponds. Pseudostereoscopic viewing of 9 by 9 in. transparencies was useful for the detailed identification of landslides, whereas 1:250,000 prints enlarged from 70 mm negatives were most suitable for regional analysis. Band 7 is the most useful band for landslide recognition, due to accentuation of ponds and shadows. Examination of both bands 7 and 5, including vegetation information, was found to be most suitable. Although, given optimum terrain conditions, some landslides in Colorado may be recognized, many smaller landslides are not identifiable. Consequently, Landsat is not recommended for detailed regional mapping, or for use in areas similar to Colorado, where alternative (aircraft) imagery is available. However, Landsat may prove useful for preliminary landslide mapping in relatively unknown areas.

  18. Preliminary integrated geologic map databases for the United States: Digital data for the generalized bedrock geologic map, Yukon Flats region, east-central Alaska

    USGS Publications Warehouse

    Till, Alison B.; Dumoulin, Julie A.; Phillips, Jeffrey D.; Stanley, Richard G.; Crews, Jessie

    2006-01-01

    The growth in the use of Geographic Information Systems (GIS) has highlighted the need for digital geologic maps that have been attributed with information about age and lithology. Such maps can be conveniently used to generate derivative maps for manifold special purposes such as mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This report is part of a series of integrated geologic map databases that cover the entire United States. Three national-scale geologic maps that portray most or all of the United States already exist; for the conterminous U.S., King and Beikman (1974a,b) compiled a map at a scale of 1:2,500,000, Beikman (1980) compiled a map for Alaska at 1:2,500,000 scale, and for the entire U.S., Reed and others (2005a,b) compiled a map at a scale of 1:5,000,000. A digital version of the King and Beikman map was published by Schruben and others (1994). Reed and Bush (2004) produced a digital version of the Reed and others (2005a) map for the conterminous U.S. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. The digital geologic maps presented here are in a standardized format as ARC/INFO export files and as ArcView shape files. Data tables that relate the map units to detailed lithologic and age information accompany these GIS files. The map is delivered as a set 1:250,000-scale quadrangle files. To the best of our ability, these quadrangle files are edge-matched with respect to geology. When the maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps.

  19. Preliminary integrated geologic map databases for the United States: Digital data for the reconnaissance geologic map of the lower Yukon River region, Alaska

    USGS Publications Warehouse

    ,

    2006-01-01

    The growth in the use of Geographic Information Systems (GIS) has highlighted the need for digital geologic maps that have been attributed with information about age and lithology. Such maps can be conveniently used to generate derivative maps for manifold special purposes such as mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This report is part of a series of integrated geologic map databases that cover the entire United States. Three national-scale geologic maps that portray most or all of the United States already exist; for the conterminous U.S., King and Beikman (1974a,b) compiled a map at a scale of 1:2,500,000, Beikman (1980) compiled a map for Alaska at 1:2,500,000 scale, and for the entire U.S., Reed and others (2005a,b) compiled a map at a scale of 1:5,000,000. A digital version of the King and Beikman map was published by Schruben and others (1994). Reed and Bush (2004) produced a digital version of the Reed and others (2005a) map for the conterminous U.S. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. The digital geologic maps presented here are in a standardized format as ARC/INFO export files and as ArcView shape files. Data tables that relate the map units to detailed lithologic and age information accompany these GIS files. The map is delivered as a set 1:250,000-scale quadrangle files. To the best of our ability, these quadrangle files are edge-matched with respect to geology. When the maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps.

  20. Mapping the magnetic and crystal structure in cobalt nanowires

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cantu-Valle, Jesus; Betancourt, Israel; Sanchez, John E.

    2015-07-14

    Using off-axis electron holography under Lorentz microscopy conditions to experimentally determine the magnetization distribution in individual cobalt (Co) nanowires, and scanning precession-electron diffraction to obtain their crystalline orientation phase map, allowed us to directly visualize with high accuracy the effect of crystallographic texture on the magnetization of nanowires. The influence of grain boundaries and disorientations on the magnetic structure is correlated on the basis of micromagnetic analysis in order to establish the detailed relationship between magnetic and crystalline structure. This approach demonstrates the applicability of the method employed and provides further understanding on the effect of crystalline structure on magneticmore » properties at the nanometric scale.« less

  1. Field surveying and topographic mapping in Alaska: 1947-83

    USGS Publications Warehouse

    Foley, Robert C.

    1987-01-01

    This circular retraces surveying and topographic mapping by the Geological Survey in Alaska from 1947 to 1983 and describes camp life and some of the unusual happenings involved in working in virtually uninhabited country, adverse weather, and difficult terrain. A year-by-year recap of activities documents the transition from early small-scale mapping efforts to more accurate and detailed 1:63,360-scale mapping for Alaska except the Aleutian Islands and isolated islands in the Bering Sea. Recent 1:25,000-scale metric mapping and the preparation of orthophotographs and special mapping efforts for other Government agencies also are recounted.

  2. Preliminary metallogenic belt and mineral deposit maps for northeast Asia

    USGS Publications Warehouse

    Obolenskiy, Alexander A.; Rodionov, Sergey M.; Dejidmaa, Gunchin; Gerel, Ochir; Hwang, Duk-Hwan; Distanov, Elimir G.; Badarch, Gombosuren; Khanchuk, Alexander I.; Ogasawara, Masatsugu; Nokleberg, Warren J.; Parfenov, Leonid M.; Prokopiev, Andrei V.; Seminskiy, Zhan V.; Smelov, Alexander P.; Yan, Hongquan; Birul'kin, Gennandiy V.; Davydov, Yuriy V.V.; Fridovskiy, Valeriy Yu.; Gamyanin, Gennandiy N.; Kostin, Alexei V.; Letunov, Sergey A.; Li, Xujun; Nikitin, Valeriy M.; Sotnikov, Sadahisa; Sudo, Vitaly I.; Spiridonov, Alexander V.; Stepanov, Vitaly A.; Sun, Fengyue; Sun, Jiapeng; Sun, Weizhi; Supletsov, Valeriy M.; Timofeev, Vladimir F.; Tyan, Oleg A.; Vetluzhskikh, Valeriy G.; Wakita, Koji; Yakovlev, Yakov V.; Zorina, Lydia M.

    2003-01-01

    The metallogenic belts and locations of major mineral deposits of Northeast Asia are portrayed on Sheets 1-4. Sheet 1 portrays the location of significant lode deposits and placer districts at a scale of 1:7,500,000. Sheets 2-4 portray the metallogenic belts of the region in a series of 12 time-slices from the Archean through the Quaternary at a scale of 1:15,000,000. For all four map sheets, a generalized geodynamics base map, derived from a more detailed map by Parfenov and others (2003), is used as an underlay for the metallogenic belt maps. This geodynamics map underlay permits depicts the major host geologic units and structures that host metallogenic belts. Four tables are included in this report. A hierarchial ranking of mineral deposit models is listed in Table 1. And summary features of lode deposits, placer districts, and metallogenic belts are described in Tables 2, 3, and 4, respectively. The metallogenic belts for Northeast Asia are synthesized, compiled, described, and interpreted with the use of modern concepts of plate tectonics, analysis of terranes and overlap assemblages, and synthesis of mineral deposit models. The data supporting the compilation are: (1) comprehensive descriptions of mineral deposits; (2) compilation and synthesis of a regional geodynamics map the region at 5 million scale with detailed explanations and cited references; and (3) compilation and synthesis of metallogenic belt maps at 15 million scale with detailed explanations and cited references. These studies are part of a major international collaborative study of the Mineral Resources, Metallogenesis, and Tectonics of Northeast Asia that is being conducted from 1997 through 2002 by geologists from earth science agencies and universities in Russia, Mongolia, Northeastern China, South Korea, Japan, and the USA. Companion studies and previous publications are: (1) a detailed geodynamics map of Northeast Asia (Parfenov and 2003); (2) a compilation of major mineral deposit

  3. Accuracy, resolution, and cost comparisons between small format and mapping cameras for environmental mapping

    NASA Technical Reports Server (NTRS)

    Clegg, R. H.; Scherz, J. P.

    1975-01-01

    Successful aerial photography depends on aerial cameras providing acceptable photographs within cost restrictions of the job. For topographic mapping where ultimate accuracy is required only large format mapping cameras will suffice. For mapping environmental patterns of vegetation, soils, or water pollution, 9-inch cameras often exceed accuracy and cost requirements, and small formats may be better. In choosing the best camera for environmental mapping, relative capabilities and costs must be understood. This study compares resolution, photo interpretation potential, metric accuracy, and cost of 9-inch, 70mm, and 35mm cameras for obtaining simultaneous color and color infrared photography for environmental mapping purposes.

  4. Geologic mapping of Argyre Planitia

    NASA Technical Reports Server (NTRS)

    Gorsline, Donn S.; Parker, Timothy J.

    1995-01-01

    This report describes the results from the geologic mapping of the central and southern Argyre basin of Mars. At the Mars Geologic Mapper's Meeting in Flagstaff during July, 1993, Dave Scott (United States Geological Survey, Mars Geologic Mapping Steering Committee Chair) recommended that all four quadrangles be combined into a single 1:1,000,000 scale map for publication. It was agreed that this would be cost-effective and that the decrease in scale would not compromise the original science goals of the mapping. Tim Parker completed mapping on the 1:500,000 scale base maps, for which all the necessary materials had already been produced, and included the work as a chapter in his dissertation, which was completed in the fall of 1994. Geologic mapping of the two southernmost quadrangles (MTM -55036 and MTM -55043; MTM=Mars Transverse Mercator) was completed as planned during the first year of work. These maps and a detailed draft of the map text were given a preliminary review by Dave Scott during summer, 1993. Geologic mapping of the remaining two quadrangles (MTM -50036 and MTM -50043) was completed by summer, 1994. Results were described at the Mars Geologic Mappers Meeting, held in Pocatello, Idaho, during July, 1994. Funds for the third and final year of the project have been transferred to the Jet Propulsion Laboratory, where Tim Parker will revise and finalize all maps and map text for publication by the United States Geological Survey at the 1:1,000,000 map scale.

  5. A comparison of Gemini and ERTS imagery obtained over southern Morocco

    NASA Technical Reports Server (NTRS)

    Blodget, H. W.; Anderson, A. T.

    1973-01-01

    A mosaic constructed from three ERTS MSS band 5 images enlarged to 1:500,000 compares favorably with a similar scale geologic map of southern Morocco, and a near-similar scale Gemini 5 photo pair. A comparative plot of lineations and generalized geology on the three formats show that a significantly greater number of probable fractures are visible on the ERTS imagery than on the Gemini photography, and that both orbital formats show several times more lineaments than were previously mapped. A plot of mineral occurrences on the structural overlays indicates that definite structure-mineralization relationships exist; this finding is used to define underdeveloped areas which are prospective for mineralization. More detailed mapping is possible using MSS imagery than on Gemini 5 photographs, and in addition, the ERTS format is not restricted to limited coverage.

  6. Smartphone snapshot mapping of skin chromophores under triple-wavelength laser illumination

    NASA Astrophysics Data System (ADS)

    Spigulis, Janis; Oshina, Ilze; Berzina, Anna; Bykov, Alexander

    2017-09-01

    Chromophore distribution maps are useful tools for skin malformation severity assessment and for monitoring of skin recovery after burns, surgeries, and other interactions. The chromophore maps can be obtained by processing several spectral images of skin, e.g., captured by hyperspectral or multispectral cameras during seconds or even minutes. To avoid motion artifacts and simplify the procedure, a single-snapshot technique for mapping melanin, oxyhemoglobin, and deoxyhemoglobin of in-vivo skin by a smartphone under simultaneous three-wavelength (448-532-659 nm) laser illumination is proposed and examined. Three monochromatic spectral images related to the illumination wavelengths were extracted from the smartphone camera RGB image data set with respect to crosstalk between the RGB detection bands. Spectral images were further processed accordingly to Beer's law in a three chromophore approximation. Photon absorption path lengths in skin at the exploited wavelengths were estimated by means of Monte Carlo simulations. The technique was validated clinically on three kinds of skin lesions: nevi, hemangiomas, and seborrheic keratosis. Design of the developed add-on laser illumination system, image-processing details, and the results of clinical measurements are presented and discussed.

  7. Smartphone snapshot mapping of skin chromophores under triple-wavelength laser illumination.

    PubMed

    Spigulis, Janis; Oshina, Ilze; Berzina, Anna; Bykov, Alexander

    2017-09-01

    Chromophore distribution maps are useful tools for skin malformation severity assessment and for monitoring of skin recovery after burns, surgeries, and other interactions. The chromophore maps can be obtained by processing several spectral images of skin, e.g., captured by hyperspectral or multispectral cameras during seconds or even minutes. To avoid motion artifacts and simplify the procedure, a single-snapshot technique for mapping melanin, oxyhemoglobin, and deoxyhemoglobin of in-vivo skin by a smartphone under simultaneous three-wavelength (448–532–659 nm) laser illumination is proposed and examined. Three monochromatic spectral images related to the illumination wavelengths were extracted from the smartphone camera RGB image data set with respect to crosstalk between the RGB detection bands. Spectral images were further processed accordingly to Beer’s law in a three chromophore approximation. Photon absorption path lengths in skin at the exploited wavelengths were estimated by means of Monte Carlo simulations. The technique was validated clinically on three kinds of skin lesions: nevi, hemangiomas, and seborrheic keratosis. Design of the developed add-on laser illumination system, image-processing details, and the results of clinical measurements are presented and discussed.

  8. Mapping the Upper Subsurface of MARS Using Radar Polarimetry

    NASA Technical Reports Server (NTRS)

    Carter, L. M.; Rincon, R.; Berkoski, L.

    2012-01-01

    Future human exploration of Mars will require detailed knowledge of the surface and upper several meters of the subsurface in potential landing sites. Likewise, many of the Planetary Science Decadal Survey science goals, such as understanding the history of Mars climate change, determining how the surface was altered through processes like volcanism and fluvial activity, and locating regions that may have been hospitable to life in the past, would be significantly advanced through mapping of the upper meters of the surface. Synthetic aperture radar (SAR) is the only remote sensing technique capable of penetrating through meters of material and imaging buried surfaces at high (meters to tens-of-meters) spatial resolution. SAR is capable of mapping the boundaries of buried units and radar polarimetry can provide quantitative information about the roughness of surface and subsurface units, depth of burial of stratigraphic units, and density of materials. Orbital SAR systems can obtain broad coverage at a spatial scale relevant to human and robotic surface operations. A polarimetric SAR system would greatly increase the safety and utility of future landed systems including sample caching.

  9. Image Analysis for Facility Siting: a Comparison of Lowand High-altitude Image Interpretability for Land Use/land Cover Mapping

    NASA Technical Reports Server (NTRS)

    Borella, H. M.; Estes, J. E.; Ezra, C. E.; Scepan, J.; Tinney, L. R.

    1982-01-01

    For two test sites in Pennsylvania the interpretability of commercially acquired low-altitude and existing high-altitude aerial photography are documented in terms of time, costs, and accuracy for Anderson Level II land use/land cover mapping. Information extracted from the imagery is to be used in the evaluation process for siting energy facilities. Land use/land cover maps were drawn at 1:24,000 scale using commercially flown color infrared photography obtained from the United States Geological Surveys' EROS Data Center. Detailed accuracy assessment of the maps generated by manual image analysis was accomplished employing a stratified unaligned adequate class representation. Both 'area-weighted' and 'by-class' accuracies were documented and field-verified. A discrepancy map was also drawn to illustrate differences in classifications between the two map scales. Results show that the 1:24,000 scale map set was more accurate (99% to 94% area-weighted) than the 1:62,500 scale set, especially when sampled by class (96% to 66%). The 1:24,000 scale maps were also more time-consuming and costly to produce, due mainly to higher image acquisition costs.

  10. Single-molecule optical genome mapping of a human HapMap and a colorectal cancer cell line.

    PubMed

    Teo, Audrey S M; Verzotto, Davide; Yao, Fei; Nagarajan, Niranjan; Hillmer, Axel M

    2015-01-01

    Next-generation sequencing (NGS) technologies have changed our understanding of the variability of the human genome. However, the identification of genome structural variations based on NGS approaches with read lengths of 35-300 bases remains a challenge. Single-molecule optical mapping technologies allow the analysis of DNA molecules of up to 2 Mb and as such are suitable for the identification of large-scale genome structural variations, and for de novo genome assemblies when combined with short-read NGS data. Here we present optical mapping data for two human genomes: the HapMap cell line GM12878 and the colorectal cancer cell line HCT116. High molecular weight DNA was obtained by embedding GM12878 and HCT116 cells, respectively, in agarose plugs, followed by DNA extraction under mild conditions. Genomic DNA was digested with KpnI and 310,000 and 296,000 DNA molecules (≥ 150 kb and 10 restriction fragments), respectively, were analyzed per cell line using the Argus optical mapping system. Maps were aligned to the human reference by OPTIMA, a new glocal alignment method. Genome coverage of 6.8× and 5.7× was obtained, respectively; 2.9× and 1.7× more than the coverage obtained with previously available software. Optical mapping allows the resolution of large-scale structural variations of the genome, and the scaffold extension of NGS-based de novo assemblies. OPTIMA is an efficient new alignment method; our optical mapping data provide a resource for genome structure analyses of the human HapMap reference cell line GM12878, and the colorectal cancer cell line HCT116.

  11. Correlation between high-resolution remote-sensing imagery and detailed field mapping in Cordilleran Miogeocline

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Feldman, S.C.; Taranik, J.V.

    1986-05-01

    Selected areas were mapped at a scale of 1:6000 in the southern hot Creek Range (south-central Nevada), which is underlain by Paleozoic autochthonous limestone, shale, and sandstone, Paleozoic allochthonous chert and siltstone, and Tertiary rhyolitic to dactitic ash flow tuff. The mapping was compared with computer-processed Airborne Imaging Spectrometer (AIS) data and Landsat Thematic Mapper (TM) imagery. The AIS imagery of the Hot Creek Range was acquired in 1984 by a NASA C-130 aircraft; it has a spatial resolution of 12 m, and swath width of 380 m. The sensor was developed by the Jet Propulsion Laboratory and is themore » first in a series of NASA imaging spectrometers. The AIS collects 128 spectral bands, having a bandwidth of approximately 9 nm, in the short-wave infrared between 1.2 and 2.4 ..mu..m. This part of the spectrum contains important narrow spectral absorption features for the carbonate ion, hydroxyl ion, and water of hydration. Using computer-processed AIS imagery, therefore, the authors can separate calcite from dolomite, and kaolinite from illite and montmorillonite as well as differentiate geologic units containing these minerals. On the AIS imagery, the Upper Mississippian Tripon Pass Limestone shows a distinctive calcite absorption feature at 2.34 ..mu..m; this feature is not as pronounced in Cambrian and Ordovician limestones. The dolomitized Nevada Formation exhibits the dolomite absorption feature at 2.32 ..mu..m. Clay mineral absorption features near 2.2 ..mu..m can be distinguished in altered volcanics. Mineralogic identification was confirmed with field and laboratory spectroradiometer measurements, thin-section examination, and x-ray analysis. AIS results and field mapping were also compared to computer-processed Landsat TM imagery, the highest spectral and spatial resolution worldwide data set currently available.« less

  12. Mask Analysis Program (MAP) reference manual

    NASA Technical Reports Server (NTRS)

    Mitchell, C. L.

    1976-01-01

    A document intended to serve as a User's Manual and a Programmer's Manual for the Mask Analysis Program is presented. The first portion of the document is devoted to the user. It contains all of the information required to execute MAP. The remainder of the document describes the details of MAP software logic. Although the information in this portion is not required to run the program, it is recommended that every user review it to gain an appreciation for the program functions.

  13. The virtual dissecting room: Creating highly detailed anatomy models for educational purposes.

    PubMed

    Zilverschoon, Marijn; Vincken, Koen L; Bleys, Ronald L A W

    2017-01-01

    Virtual 3D models are powerful tools for teaching anatomy. At the present day, there are a lot of different digital anatomy models, most of these commercial applications are based on a 3D model of a human body reconstructed from images with a 1mm intervals. The use of even smaller intervals may result in more details and more realistic appearances of 3D anatomy models. The aim of this study was to create a realistic and highly detailed 3D model of the hand and wrist based on small interval cross-sectional images, suitable for undergraduate and postgraduate teaching purposes with the possibility to perform a virtual dissection in an educational application. In 115 transverse cross-sections from a human hand and wrist, segmentation was done by manually delineating 90 different structures. With the use of Amira the segments were imported and a surface model/polygon model was created, followed by smoothening of the surfaces in Mudbox. In 3D Coat software the smoothed polygon models were automatically retopologied into a quadrilaterals formation and a UV map was added. In Mudbox, the textures from 90 structures were depicted in a realistic way by using photos from real tissue and afterwards height maps, gloss and specular maps were created to add more level of detail and realistic lightning on every structure. Unity was used to build a new software program that would support all the extra map features together with a preferred user interface. A 3D hand model has been created, containing 100 structures (90 at start and 10 extra structures added along the way). The model can be used interactively by changing the transparency, manipulating single or grouped structures and thereby simulating a virtual dissection. This model can be used for a variety of teaching purposes, ranging from undergraduate medical students to residents of hand surgery. Studying the hand and wrist anatomy using this model is cost-effective and not hampered by the limited access to real dissecting

  14. Capturing Fine Details Involving Low-Cost Sensors -a Comparative Study

    NASA Astrophysics Data System (ADS)

    Rehany, N.; Barsi, A.; Lovas, T.

    2017-11-01

    Capturing the fine details on the surface of small objects is a real challenge to many conventional surveying methods. Our paper discusses the investigation of several data acquisition technologies, such as arm scanner, structured light scanner, terrestrial laser scanner, object line-scanner, DSLR camera, and mobile phone camera. A palm-sized embossed sculpture reproduction was used as a test object; it has been surveyed by all the instruments. The result point clouds and meshes were then analyzed, using the arm scanner's dataset as reference. In addition to general statistics, the results have been evaluated based both on 3D deviation maps and 2D deviation graphs; the latter allows even more accurate analysis of the characteristics of the different data acquisition approaches. Additionally, own-developed local minimum maps were created that nicely visualize the potential level of detail provided by the applied technologies. Besides the usual geometric assessment, the paper discusses the different resource needs (cost, time, expertise) of the discussed techniques. Our results proved that even amateur sensors operated by amateur users can provide high quality datasets that enable engineering analysis. Based on the results, the paper contains an outlook to potential future investigations in this field.

  15. Lessons from 25 years of genetic mapping in onion: where next?

    USDA-ARS?s Scientific Manuscript database

    Genetic maps are useful tools for both basic research and plant improvement. Close association of genetic markers with genes controlling economically important traits allows for indirect selection, avoiding often time-consuming and expensive phenotypic evaluations. As a result, detailed genetic maps...

  16. Cytogenetic Analysis of the South American Fruit Fly Anastrepha fraterculus (Diptera:Tephritidae) Species Complex: Construction of Detailed Photographic Polytene Chromosome Maps of the Argentinian Af. sp.1 Member

    PubMed Central

    Augustinos, Antonios A.; Drosopoulou, Elena; Lanzavecchia, Silvia B.; Cladera, Jorge L.; Caceres, Carlos; Bourtzis, Kostas; Mavragani-Tsipidou, Penelope; Zacharopoulou, Antigone

    2016-01-01

    Genetic and cytogenetic studies constitute a significant basis for understanding the biology of insect pests and the design and the construction of genetic tools for biological control strategies. Anastrepha fraterculus is an important pest of the Tephritidae family. It is distributed from southern Texas through eastern Mexico, Central America and South America causing significant crop damage and economic losses. Currently it is considered as a species complex; until now seven members have been described based on multidisciplinary approaches. Here we report the cytogenetic analysis of an Argentinian population characterized as Af. sp.1 member of the Anastrepha fraterculus species complex. The mitotic karyotype and the first detailed photographic maps of the salivary gland polytene chromosomes are presented. The mitotic metaphase complement consists of six (6) pairs of chromosomes, including one pair of heteromorphic sex chromosomes, with the male being the heterogametic sex. The analysis of the salivary gland polytene complement shows a total number of five long chromosomes that correspond to the five autosomes of the mitotic karyotype and a heterochromatic network corresponding to the sex chromosomes. Comparison of the polytene chromosome maps between this species and Anastrepha ludens shows significant similarity. The polytene maps presented here are suitable for cytogenetic studies that could shed light on the species limits within this species complex and support the development of genetic tools for sterile insect technique (SIT) applications. PMID:27362546

  17. California State Waters Map Series Data Catalog

    USGS Publications Warehouse

    Golden, Nadine E.

    2013-01-01

    In 2007, the California Ocean Protection Council initiated the California Seafloor Mapping Program (CSMP), designed to create a comprehensive seafloor map of high-resolution bathymetry, marine benthic habitats, and geology within the 3-nautical-mile limit of California's State Waters. The CSMP approach is to create highly detailed seafloor maps and associated data layers through the collection, integration, interpretation, and visualization of swath sonar data, acoustic backscatter, seafloor video, seafloor photography, high-resolution seismic-reflection profiles, and bottom-sediment sampling data. CSMP has divided coastal California into 110 map blocks (fig. 1), each to be published individually as USGS Scientific Investigations Maps (SIMs) at a scale of 1:24,000. The map products display seafloor morphology and character, identify potential marine benthic habitats, and illustrate both the seafloor geology and shallow (to about 100 m) subsurface geology. This CSMP data catalog contains much of the data used to prepare the SIMs in the California State Waters Map Series. Other data that were used to prepare the maps were compiled from previously published sources (for example, onshore geology) and, thus, are not included herein.

  18. Chromosomal Mapping of Canine-Derived BAC Clones to the Red Fox and American Mink Genomes

    PubMed Central

    Vorobieva, Nadegda V.; Beklemisheva, Violetta R.; Johnson, Jennifer L.; Temnykh, Svetlana V.; Yudkin, Dmitry V.; Trut, Lyudmila N.; Andre, Catherine; Galibert, Francis; Aguirre, Gustavo D.; Acland, Gregory M.; Graphodatsky, Alexander S.

    2009-01-01

    High-quality sequencing of the dog (Canis lupus familiaris) genome has enabled enormous progress in genetic mapping of canine phenotypic variation. The red fox (Vulpes vulpes), another canid species, also exhibits a wide range of variation in coat color, morphology, and behavior. Although the fox genome has not yet been sequenced, canine genomic resources have been used to construct a meiotic linkage map of the red fox genome and begin genetic mapping in foxes. However, a more detailed gene-specific comparative map between the dog and fox genomes is required to establish gene order within homologous regions of dog and fox chromosomes and to refine breakpoints between homologous chromosomes of the 2 species. In the current study, we tested whether canine-derived gene–containing bacterial artificial chromosome (BAC) clones can be routinely used to build a gene-specific map of the red fox genome. Forty canine BAC clones were mapped to the red fox genome by fluorescence in situ hybridization (FISH). Each clone was uniquely assigned to a single fox chromosome, and the locations of 38 clones agreed with cytogenetic predictions. These results clearly demonstrate the utility of FISH mapping for construction of a whole-genome gene-specific map of the red fox. The further possibility of using canine BAC clones to map genes in the American mink (Mustela vison) genome was also explored. Much lower success was obtained for this more distantly related farm-bred species, although a few BAC clones were mapped to the predicted chromosomal locations. PMID:19546120

  19. Chromosomal mapping of canine-derived BAC clones to the red fox and American mink genomes.

    PubMed

    Kukekova, Anna V; Vorobieva, Nadegda V; Beklemisheva, Violetta R; Johnson, Jennifer L; Temnykh, Svetlana V; Yudkin, Dmitry V; Trut, Lyudmila N; Andre, Catherine; Galibert, Francis; Aguirre, Gustavo D; Acland, Gregory M; Graphodatsky, Alexander S

    2009-01-01

    High-quality sequencing of the dog (Canis lupus familiaris) genome has enabled enormous progress in genetic mapping of canine phenotypic variation. The red fox (Vulpes vulpes), another canid species, also exhibits a wide range of variation in coat color, morphology, and behavior. Although the fox genome has not yet been sequenced, canine genomic resources have been used to construct a meiotic linkage map of the red fox genome and begin genetic mapping in foxes. However, a more detailed gene-specific comparative map between the dog and fox genomes is required to establish gene order within homologous regions of dog and fox chromosomes and to refine breakpoints between homologous chromosomes of the 2 species. In the current study, we tested whether canine-derived gene-containing bacterial artificial chromosome (BAC) clones can be routinely used to build a gene-specific map of the red fox genome. Forty canine BAC clones were mapped to the red fox genome by fluorescence in situ hybridization (FISH). Each clone was uniquely assigned to a single fox chromosome, and the locations of 38 clones agreed with cytogenetic predictions. These results clearly demonstrate the utility of FISH mapping for construction of a whole-genome gene-specific map of the red fox. The further possibility of using canine BAC clones to map genes in the American mink (Mustela vison) genome was also explored. Much lower success was obtained for this more distantly related farm-bred species, although a few BAC clones were mapped to the predicted chromosomal locations.

  20. Hybrid optical acoustic seafloor mapping

    NASA Astrophysics Data System (ADS)

    Inglis, Gabrielle

    The oceanographic research and industrial communities have a persistent demand for detailed three dimensional sea floor maps which convey both shape and texture. Such data products are used for archeology, geology, ship inspection, biology, and habitat classification. There are a variety of sensing modalities and processing techniques available to produce these maps and each have their own potential benefits and related challenges. Multibeam sonar and stereo vision are such two sensors with complementary strengths making them ideally suited for data fusion. Data fusion approaches however, have seen only limited application to underwater mapping and there are no established methods for creating hybrid, 3D reconstructions from two underwater sensing modalities. This thesis develops a processing pipeline to synthesize hybrid maps from multi-modal survey data. It is helpful to think of this processing pipeline as having two distinct phases: Navigation Refinement and Map Construction. This thesis extends existing work in underwater navigation refinement by incorporating methods which increase measurement consistency between both multibeam and camera. The result is a self consistent 3D point cloud comprised of camera and multibeam measurements. In map construction phase, a subset of the multi-modal point cloud retaining the best characteristics of each sensor is selected to be part of the final map. To quantify the desired traits of a map several characteristics of a useful map are distilled into specific criteria. The different ways that hybrid maps can address these criteria provides justification for producing them as an alternative to current methodologies. The processing pipeline implements multi-modal data fusion and outlier rejection with emphasis on different aspects of map fidelity. The resulting point cloud is evaluated in terms of how well it addresses the map criteria. The final hybrid maps retain the strengths of both sensors and show significant improvement

  1. Landslide susceptibility mapping for a landslide-prone area (Findikli, NE of Turkey) by likelihood-frequency ratio and weighted linear combination models

    NASA Astrophysics Data System (ADS)

    Akgun, Aykut; Dag, Serhat; Bulut, Fikri

    2008-05-01

    Landslides are very common natural problems in the Black Sea Region of Turkey due to the steep topography, improper use of land cover and adverse climatic conditions for landslides. In the western part of region, many studies have been carried out especially in the last decade for landslide susceptibility mapping using different evaluation methods such as deterministic approach, landslide distribution, qualitative, statistical and distribution-free analyses. The purpose of this study is to produce landslide susceptibility maps of a landslide-prone area (Findikli district, Rize) located at the eastern part of the Black Sea Region of Turkey by likelihood frequency ratio (LRM) model and weighted linear combination (WLC) model and to compare the results obtained. For this purpose, landslide inventory map of the area were prepared for the years of 1983 and 1995 by detailed field surveys and aerial-photography studies. Slope angle, slope aspect, lithology, distance from drainage lines, distance from roads and the land-cover of the study area are considered as the landslide-conditioning parameters. The differences between the susceptibility maps derived by the LRM and the WLC models are relatively minor when broad-based classifications are taken into account. However, the WLC map showed more details but the other map produced by LRM model produced weak results. The reason for this result is considered to be the fact that the majority of pixels in the LRM map have high values than the WLC-derived susceptibility map. In order to validate the two susceptibility maps, both of them were compared with the landslide inventory map. Although the landslides do not exist in the very high susceptibility class of the both maps, 79% of the landslides fall into the high and very high susceptibility zones of the WLC map while this is 49% for the LRM map. This shows that the WLC model exhibited higher performance than the LRM model.

  2. Mental maps and travel behaviour: meanings and models

    NASA Astrophysics Data System (ADS)

    Hannes, Els; Kusumastuti, Diana; Espinosa, Maikel León; Janssens, Davy; Vanhoof, Koen; Wets, Geert

    2012-04-01

    In this paper, the " mental map" concept is positioned with regard to individual travel behaviour to start with. Based on Ogden and Richards' triangle of meaning (The meaning of meaning: a study of the influence of language upon thought and of the science of symbolism. International library of psychology, philosophy and scientific method. Routledge and Kegan Paul, London, 1966) distinct thoughts, referents and symbols originating from different scientific disciplines are identified and explained in order to clear up the notion's fuzziness. Next, the use of this concept in two major areas of research relevant to travel demand modelling is indicated and discussed in detail: spatial cognition and decision-making. The relevance of these constructs to understand and model individual travel behaviour is explained and current research efforts to implement these concepts in travel demand models are addressed. Furthermore, these mental map notions are specified in two types of computational models, i.e. a Bayesian Inference Network (BIN) and a Fuzzy Cognitive Map (FCM). Both models are explained, and a numerical and a real-life example are provided. Both approaches yield a detailed quantitative representation of the mental map of decision-making problems in travel behaviour.

  3. Preliminary integrated geologic map databases for the United States: Digital data for the reconnaissance bedrock geologic map for the northern Alaska peninsula area, southwest Alaska

    USGS Publications Warehouse

    ,

    2006-01-01

    he growth in the use of Geographic Information Systems (GIS) has highlighted the need for digital geologic maps that have been attributed with information about age and lithology. Such maps can be conveniently used to generate derivative maps for manifold special purposes such as mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This report is part of a series of integrated geologic map databases that cover the entire United States. Three national-scale geologic maps that portray most or all of the United States already exist; for the conterminous U.S., King and Beikman (1974a,b) compiled a map at a scale of 1:2,500,000, Beikman (1980) compiled a map for Alaska at 1:2,500,000 scale, and for the entire U.S., Reed and others (2005a,b) compiled a map at a scale of 1:5,000,000. A digital version of the King and Beikman map was published by Schruben and others (1994). Reed and Bush (2004) produced a digital version of the Reed and others (2005a) map for the conterminous U.S. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. The digital geologic maps presented here are in a standardized format as ARC/INFO export files and as ArcView shape files. Data tables that relate the map units to detailed lithologic and age information accompany these GIS files. The map is delivered as a set 1:250,000-scale quadrangle files. To the best of our ability, these quadrangle files are edge-matched with respect to geology. When the maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps.

  4. LANDSAT (ERTS) used as a basis for geological volcanological mapping in the central Andes

    NASA Technical Reports Server (NTRS)

    Kussmaul, S.; Brockman, C. E.

    1977-01-01

    LANDSAT images of the central Andes (N-Chile, W-Bolivia) were effectively used for volcanological mapping of an area about 160,000 km. The map shown exhibits more and better details than the older small scale geological maps of that area. Even on a scale of 1:1,000,000 details greater than 200 m in size are recognizable. The interpretation of LANDSAT images makes it possible to establish relative age sequences of strato-volcanoes. Finally, the images will also be helpful in prospecting for mineral deposits and geothermal sources.

  5. A first generation BAC-based physical map of the rainbow trout genome

    PubMed Central

    Palti, Yniv; Luo, Ming-Cheng; Hu, Yuqin; Genet, Carine; You, Frank M; Vallejo, Roger L; Thorgaard, Gary H; Wheeler, Paul A; Rexroad, Caird E

    2009-01-01

    Background Rainbow trout (Oncorhynchus mykiss) are the most-widely cultivated cold freshwater fish in the world and an important model species for many research areas. Coupling great interest in this species as a research model with the need for genetic improvement of aquaculture production efficiency traits justifies the continued development of genomics research resources. Many quantitative trait loci (QTL) have been identified for production and life-history traits in rainbow trout. A bacterial artificial chromosome (BAC) physical map is needed to facilitate fine mapping of QTL and the selection of positional candidate genes for incorporation in marker-assisted selection (MAS) for improving rainbow trout aquaculture production. This resource will also facilitate efforts to obtain and assemble a whole-genome reference sequence for this species. Results The physical map was constructed from DNA fingerprinting of 192,096 BAC clones using the 4-color high-information content fingerprinting (HICF) method. The clones were assembled into physical map contigs using the finger-printing contig (FPC) program. The map is composed of 4,173 contigs and 9,379 singletons. The total number of unique fingerprinting fragments (consensus bands) in contigs is 1,185,157, which corresponds to an estimated physical length of 2.0 Gb. The map assembly was validated by 1) comparison with probe hybridization results and agarose gel fingerprinting contigs; and 2) anchoring large contigs to the microsatellite-based genetic linkage map. Conclusion The production and validation of the first BAC physical map of the rainbow trout genome is described in this paper. We are currently integrating this map with the NCCCWA genetic map using more than 200 microsatellites isolated from BAC end sequences and by identifying BACs that harbor more than 300 previously mapped markers. The availability of an integrated physical and genetic map will enable detailed comparative genome analyses, fine mapping of

  6. Dynamic map labeling.

    PubMed

    Been, Ken; Daiches, Eli; Yap, Chee

    2006-01-01

    We address the problem of filtering, selecting and placing labels on a dynamic map, which is characterized by continuous zooming and panning capabilities. This consists of two interrelated issues. The first is to avoid label popping and other artifacts that cause confusion and interrupt navigation, and the second is to label at interactive speed. In most formulations the static map labeling problem is NP-hard, and a fast approximation might have O(nlogn) complexity. Even this is too slow during interaction, when the number of labels shown can be several orders of magnitude less than the number in the map. In this paper we introduce a set of desiderata for "consistent" dynamic map labeling, which has qualities desirable for navigation. We develop a new framework for dynamic labeling that achieves the desiderata and allows for fast interactive display by moving all of the selection and placement decisions into the preprocessing phase. This framework is general enough to accommodate a variety of selection and placement algorithms. It does not appear possible to achieve our desiderata using previous frameworks. Prior to this paper, there were no formal models of dynamic maps or of dynamic labels; our paper introduces both. We formulate a general optimization problem for dynamic map labeling and give a solution to a simple version of the problem. The simple version is based on label priorities and a versatile and intuitive class of dynamic label placements we call "invariant point placements". Despite these restrictions, our approach gives a useful and practical solution. Our implementation is incorporated into the G-Vis system which is a full-detail dynamic map of the continental USA. This demo is available through any browser.

  7. A Lightning Channel Retrieval Algorithm for the North Alabama Lightning Mapping Array (LMA)

    NASA Technical Reports Server (NTRS)

    Koshak, William; Arnold, James E. (Technical Monitor)

    2002-01-01

    A new multi-station VHF time-of-arrival (TOA) antenna network is, at the time of this writing, coming on-line in Northern Alabama. The network, called the Lightning Mapping Array (LMA), employs GPS timing and detects VHF radiation from discrete segments (effectively point emitters) that comprise the channel of lightning strokes within cloud and ground flashes. The network will support on-going ground validation activities of the low Earth orbiting Lightning Imaging Sensor (LIS) satellite developed at NASA Marshall Space Flight Center (MSFC) in Huntsville, Alabama. It will also provide for many interesting and detailed studies of the distribution and evolution of thunderstorms and lightning in the Tennessee Valley, and will offer many interesting comparisons with other meteorological/geophysical wets associated with lightning and thunderstorms. In order to take full advantage of these benefits, it is essential that the LMA channel mapping accuracy (in both space and time) be fully characterized and optimized. In this study, a new revised channel mapping retrieval algorithm is introduced. The algorithm is an extension of earlier work provided in Koshak and Solakiewicz (1996) in the analysis of the NASA Kennedy Space Center (KSC) Lightning Detection and Ranging (LDAR) system. As in the 1996 study, direct algebraic solutions are obtained by inverting a simple linear system of equations, thereby making computer searches through a multi-dimensional parameter domain of a Chi-Squared function unnecessary. However, the new algorithm is developed completely in spherical Earth-centered coordinates (longitude, latitude, altitude), rather than in the (x, y, z) cartesian coordinates employed in the 1996 study. Hence, no mathematical transformations from (x, y, z) into spherical coordinates are required (such transformations involve more numerical error propagation, more computer program coding, and slightly more CPU computing time). The new algorithm also has a more realistic

  8. Mapping the 2017 Eclipse: Education, Navigation, Inspiration

    NASA Astrophysics Data System (ADS)

    Zeiler, M.

    2015-12-01

    Eclipse maps are a unique vessel of knowledge. At a glance, they communicate the essential knowledge of where and when to successfully view a total eclipse of the sun. An eclipse map also provides detailed knowledge of eclipse circumstances superimposed on the highway system for optimal navigation, especially in the event that weather forces relocation. Eclipse maps are also a vital planning tool for solar physicists and astrophotographers capturing high-resolution imagery of the solar corona. Michael Zeiler will speak to the role of eclipse maps in educating the American public and inspiring people to make the effort to reach the path of totality for the sight of a lifetime. Michael will review the role of eclipse maps in astronomical research and discuss a project under development, the 2017 Eclipse Atlas for smartphones, tablets, and desktop computers.

  9. E-detailing: information technology applied to pharmaceutical detailing.

    PubMed

    Montoya, Isaac D

    2008-11-01

    E-detailing can be best described as the use of information technology in the field of pharmaceutical detailing. It is becoming highly popular among pharmaceutical companies because it maximizes the time of the sales force, cuts down the cost of detailing and increases physician prescribing. Thus, the application of information technology is proving to be beneficial to both physicians and pharmaceutical companies. When e-detailing was introduced in 1996, it was limited to the US; however, numerous other countries soon adopted this novel approach to detailing and now it is popular in many developed nations. The objective of this paper is to demonstrate the rapid growth of e-detailing in the field of pharmaceutical marketing. A review of e-detailing literature was conducted in addition to personal conversations with physicians. E-detailing has the potential to reduce marketing costs, increase accessibility to physicians and offer many of the advantages of face-to-face detailing. E-detailing is gaining acceptance among physicians because they can access the information of a pharmaceutical product at their own time and convenience. However, the drug safety aspect of e-detailing has not been examined and e-detailing remains a supplement to traditional detailing and is not yet a replacement to it.

  10. Wild boar mapping using population-density statistics: From polygons to high resolution raster maps.

    PubMed

    Pittiglio, Claudia; Khomenko, Sergei; Beltran-Alcrudo, Daniel

    2018-01-01

    The wild boar is an important crop raider as well as a reservoir and agent of spread of swine diseases. Due to increasing densities and expanding ranges worldwide, the related economic losses in livestock and agricultural sectors are significant and on the rise. Its management and control would strongly benefit from accurate and detailed spatial information on species distribution and abundance, which are often available only for small areas. Data are commonly available at aggregated administrative units with little or no information about the distribution of the species within the unit. In this paper, a four-step geostatistical downscaling approach is presented and used to disaggregate wild boar population density statistics from administrative units of different shape and size (polygons) to 5 km resolution raster maps by incorporating auxiliary fine scale environmental variables. 1) First a stratification method was used to define homogeneous bioclimatic regions for the analysis; 2) Under a geostatistical framework, the wild boar densities at administrative units, i.e. subnational areas, were decomposed into trend and residual components for each bioclimatic region. Quantitative relationships between wild boar data and environmental variables were estimated through multiple regression and used to derive trend components at 5 km spatial resolution. Next, the residual components (i.e., the differences between the trend components and the original wild boar data at administrative units) were downscaled at 5 km resolution using area-to-point kriging. The trend and residual components obtained at 5 km resolution were finally added to generate fine scale wild boar estimates for each bioclimatic region. 3) These maps were then mosaicked to produce a final output map of predicted wild boar densities across most of Eurasia. 4) Model accuracy was assessed at each different step using input as well as independent data. We discuss advantages and limits of the method and its

  11. Wild boar mapping using population-density statistics: From polygons to high resolution raster maps

    PubMed Central

    Pittiglio, Claudia; Khomenko, Sergei

    2018-01-01

    The wild boar is an important crop raider as well as a reservoir and agent of spread of swine diseases. Due to increasing densities and expanding ranges worldwide, the related economic losses in livestock and agricultural sectors are significant and on the rise. Its management and control would strongly benefit from accurate and detailed spatial information on species distribution and abundance, which are often available only for small areas. Data are commonly available at aggregated administrative units with little or no information about the distribution of the species within the unit. In this paper, a four-step geostatistical downscaling approach is presented and used to disaggregate wild boar population density statistics from administrative units of different shape and size (polygons) to 5 km resolution raster maps by incorporating auxiliary fine scale environmental variables. 1) First a stratification method was used to define homogeneous bioclimatic regions for the analysis; 2) Under a geostatistical framework, the wild boar densities at administrative units, i.e. subnational areas, were decomposed into trend and residual components for each bioclimatic region. Quantitative relationships between wild boar data and environmental variables were estimated through multiple regression and used to derive trend components at 5 km spatial resolution. Next, the residual components (i.e., the differences between the trend components and the original wild boar data at administrative units) were downscaled at 5 km resolution using area-to-point kriging. The trend and residual components obtained at 5 km resolution were finally added to generate fine scale wild boar estimates for each bioclimatic region. 3) These maps were then mosaicked to produce a final output map of predicted wild boar densities across most of Eurasia. 4) Model accuracy was assessed at each different step using input as well as independent data. We discuss advantages and limits of the method and its

  12. Soil maps as data input for soil erosion models: errors related to map scales

    NASA Astrophysics Data System (ADS)

    van Dijk, Paul; Sauter, Joëlle; Hofstetter, Elodie

    2010-05-01

    Soil erosion rates depend in many ways on soil and soil surface characteristics which vary in space and in time. To account for spatial variations of soil features, most distributed soil erosion models require data input derived from soil maps. Ideally, the level of spatial detail contained in the applied soil map should correspond to the objective of the modelling study. However, often the model user has only one soil map available which is then applied without questioning its suitability. The present study seeks to determine in how far soil map scale can be a source of error in erosion model output. The study was conducted on two different spatial scales, with for each of them a convenient soil erosion model: a) the catchment scale using the physically-based Limbourg Soil Erosion Model (LISEM), and b) the regional scale using the decision-tree expert model MESALES. The suitability of the applied soil map was evaluated with respect to an imaginary though realistic study objective for both models: the definition of erosion control measures at strategic locations at the catchment scale; the identification of target areas for the definition of control measures strategies at the regional scale. Two catchments were selected to test the sensitivity of LISEM to the spatial detail contained in soil maps: one catchment with relatively little contrast in soil texture, dominated by loess-derived soil (south of the Alsace), and one catchment with strongly contrasted soils at the limit between the Alsatian piedmont and the loess-covered hills of the Kochersberg. LISEM was run for both catchments using different soil maps ranging in scale from 1/25 000 to 1/100 000 to derive soil related input parameters. The comparison of the output differences was used to quantify the map scale impact on the quality of the model output. The sensitivity of MESALES was tested on the Haut-Rhin county for which two soil maps are available for comparison: 1/50 000 and 1/100 000. The order of

  13. A close-range photogrammetric technique for mapping neotectonic features in trenches

    USGS Publications Warehouse

    Fairer, G.M.; Whitney, J.W.; Coe, J.A.

    1989-01-01

    Close-range photogrammetric techniques and newly available computerized plotting equipment were used to map exploratory trench walls that expose Quaternary faults in the vicinity of Yucca Mountain, Nevada. Small-scale structural, lithologic, and stratigraphic features can be rapidly mapped by the photogrammetric method. This method is more accurate and significantly more rapid than conventional trench-mapping methods, and the analytical plotter is capable of producing cartographic definition of high resolution when detailed trench maps are necessary. -from Authors

  14. The U.S. Geological Survey mapping and cartographic database activities, 2006-2010

    USGS Publications Warehouse

    Craun, Kari J.; Donnelly, John P.; Allord, Gregory J.

    2011-01-01

    The U.S. Geological Survey (USGS) began systematic topographic mapping of the United States in the 1880s, beginning with scales of 1:250,000 and 1:125,000 in support of geological mapping. Responding to the need for higher resolution and more detail, the 1:62,500-scale, 15-minute, topographic map series was begun in the beginning of the 20th century. Finally, in the 1950s the USGS adopted the 1:24,000-scale, 7.5-minute topographic map series to portray even more detail, completing the coverage of the conterminous 48 states of the United States with this series in 1992. In 2001, the USGS developed the vision and concept of The National Map, a topographic database for the 21st century and the source for a new generation of topographic maps (http://nationalmap.gov/). In 2008, the initial production of those maps began with a 1:24,000-scale digital product. In a separate, but related project, the USGS began scanning the existing inventory of historical topographic maps at all scales to accompany the new topographic maps. The USGS also had developed a digital database of The National Atlas of the United States. The digital version of Atlas is now Web-available and supports a mapping engine for small scale maps of the United States and North America. These three efforts define topographic mapping activities of the USGS during the last few years and are discussed below.

  15. mapKITE: a New Paradigm for Simultaneous Aerial and Terrestrial Geodata Acquisition and Mapping

    NASA Astrophysics Data System (ADS)

    Molina, P.; Blázquez, M.; Sastre, J.; Colomina, I.

    2016-06-01

    We introduce a new mobile, simultaneous terrestrial and aerial, geodata collection and post-processing method: mapKITE. By combining two mapping technologies such as terrestrial mobile mapping and unmanned aircraft aerial mapping, geodata are simultaneously acquired from air and ground. More in detail, a mapKITE geodata acquisition system consists on an unmanned aircraft and a terrestrial vehicle, which hosts the ground control station. By means of a real-time navigation system on the terrestrial vehicle, real-time waypoints are sent to the aircraft from the ground. By doing so, the aircraft is linked to the terrestrial vehicle through a "virtual tether," acting as a "mapping kite." In the article, we entail the concept of mapKITE as well as the various technologies and techniques involved, from aircraft guidance and navigation based on IMU and GNSS, optical cameras for mapping and tracking, sensor orientation and calibration, etc. Moreover, we report of a new measurement introduced in mapKITE, that is, point-and-scale photogrammetric measurements [of image coordinates and scale] for optical targets of known size installed on the ground vehicle roof. By means of accurate posteriori trajectory determination of the terrestrial vehicle, mapKITE benefits then from kinematic ground control points which are photogrametrically observed by point-and-scale measures. Initial results for simulated configurations show that these measurements added to the usual Integrated Sensor Orientation ones reduce or even eliminate the need of conventional ground control points -therefore, lowering mission costs- and enable selfcalibration of the unmanned aircraft interior orientation parameters in corridor configurations, in contrast to the situation of traditional corridor configurations. Finally, we report about current developments of the first mapKITE prototype, developed under the European Union Research and Innovation programme Horizon 2020. The first mapKITE mission will be held at

  16. The use of color infrared photography for wetlands mapping with special reference to shoreline and waterfowl habitat assessment

    NASA Technical Reports Server (NTRS)

    1973-01-01

    Evaluation of low altitude oblique photography obtained by hand-held cameras was useful in determining specifications of operational mission requirements for conventional smaller-scaled vertical photography. Remote sensing techniques were used to assess the rapid destruction of marsh areas at Pointe Mouillee. In an estuarian environment where shoreline features change yearly, there is a need for revision in existing area maps. A land cover inventory, mapped from aerial photography, provided essential data necessary for determining adjacent lands suitable for marshland development. To quantitatively assess the wetlands environment, a detailed inventory of vegetative communities (19 categories) was made using color infrared photography and intensive ground truth. A carefully selected and well laid-out transect was found to be a key asset to photointerpretation and to the analysis of vegetative conditions. Transect data provided the interpreter with locally representative areas of various vegetative types. This facilitated development of a photointerpretation key. Additional information on vegetative conditions in the area was also obtained by evaluating the transect data.

  17. Geologic map of the Metis Mons quadrangle (V–6), Venus

    USGS Publications Warehouse

    Dohm, James M.; Tanaka, Kenneth L.; Skinner, James A.

    2011-01-01

    The Metis Mons quadrangle (V–6) in the northern hemisphere of Venus (lat 50° to 75° N., long 240° to 300° E.) includes a variety of coronae, large volcanoes, ridge and fracture (structure) belts, tesserae, impact craters, and other volcanic and structural features distributed within a plains setting, affording study of their detailed age relations and evolutionary development. Coronae in particular have magmatic, tectonic, and topographic signatures that indicate complex evolutionary histories. Previously, the geology of the map region has been described either in general or narrowly focused investigations. Based on Venera radar mapping, a 1:15,000,000-scale geologic map of part of the northern hemisphere of Venus included the V–6 map region and identified larger features such as tesserae, smooth and hummocky plains materials, ridge belts, coronae, volcanoes, and impact craters but proposed little relative-age information. Global-scale mapping from Magellan data identified similar features and also determined their mean global ages with crater counts. However, the density of craters on Venus is too low for meaningful relative-age determinations at local to regional scales. Several of the coronae in the map area have been described using Venera data (Stofan and Head, 1990), while Crumpler and others (1992) compiled detailed identification and description of volcanic and tectonic features from Magellan data. The main purpose of this map is to reconstruct the geologic history of the Metis Mons quadrangle at a level of detail commensurate with a scale of 1:5,000,000 using Magellan data. We interpret four partly overlapping stages of geologic activity, which collectively resulted in the formation of tesserae, coronae (oriented along structure belts), plains materials of varying ages, and four large volcanic constructs. Scattered impact craters, small shields and pancake-shaped domes, and isolated flows superpose the tectonically deformed materials and appear to

  18. Novel method for measuring a dense 3D strain map of robotic flapping wings

    NASA Astrophysics Data System (ADS)

    Li, Beiwen; Zhang, Song

    2018-04-01

    Measuring dense 3D strain maps of the inextensible membranous flapping wings of robots is of vital importance to the field of bio-inspired engineering. Conventional high-speed 3D videography methods typically reconstruct the wing geometries through measuring sparse points with fiducial markers, and thus cannot obtain the full-field mechanics of the wings in detail. In this research, we propose a novel system to measure a dense strain map of inextensible membranous flapping wings by developing a superfast 3D imaging system and a computational framework for strain analysis. Specifically, first we developed a 5000 Hz 3D imaging system based on the digital fringe projection technique using the defocused binary patterns to precisely measure the dynamic 3D geometries of rapidly flapping wings. Then, we developed a geometry-based algorithm to perform point tracking on the precisely measured 3D surface data. Finally, we developed a dense strain computational method using the Kirchhoff-Love shell theory. Experiments demonstrate that our method can effectively perform point tracking and measure a highly dense strain map of the wings without many fiducial markers.

  19. Using ecological zones to increase the detail of Landsat classifications

    NASA Technical Reports Server (NTRS)

    Fox, L., III; Mayer, K. E.

    1981-01-01

    Changes in classification detail of forest species descriptions were made for Landsat data on 2.2 million acres in northwestern California. Because basic forest canopy structures may exhibit very similar E-M energy reflectance patterns in different environmental regions, classification labels based on Landsat spectral signatures alone become very generalized when mapping large heterogeneous ecological regions. By adding a seven ecological zone stratification, a 167% improvement in classification detail was made over the results achieved without it. The seven zone stratification is a less costly alternative to the inclusion of complex collateral information, such as terrain data and soil type, into the Landsat data base when making inventories of areas greater than 500,000 acres.

  20. Mapping absolute tissue endogenous fluorophore concentrations with chemometric wide-field fluorescence microscopy

    NASA Astrophysics Data System (ADS)

    Xu, Zhang; Reilley, Michael; Li, Run; Xu, Min

    2017-06-01

    We report chemometric wide-field fluorescence microscopy for imaging the spatial distribution and concentration of endogenous fluorophores in thin tissue sections. Nonnegative factorization aided by spatial diversity is used to learn both the spectral signature and the spatial distribution of endogenous fluorophores from microscopic fluorescence color images obtained under broadband excitation and detection. The absolute concentration map of individual fluorophores is derived by comparing the fluorescence from "pure" fluorophores under the identical imaging condition following the identification of the fluorescence species by its spectral signature. This method is then demonstrated by characterizing the concentration map of endogenous fluorophores (including tryptophan, elastin, nicotinamide adenine dinucleotide, and flavin adenine dinucleotide) for lung tissue specimens. The absolute concentrations of these fluorophores are all found to decrease significantly from normal, perilesional, to cancerous (squamous cell carcinoma) tissue. Discriminating tissue types using the absolute fluorophore concentration is found to be significantly more accurate than that achievable with the relative fluorescence strength. Quantification of fluorophores in terms of the absolute concentration map is also advantageous in eliminating the uncertainties due to system responses or measurement details, yielding more biologically relevant data, and simplifying the assessment of competing imaging approaches.

  1. A consensus genetic map of sorghum that integrates multiple component maps and high-throughput diversity array technology (DArT) markers

    USDA-ARS?s Scientific Manuscript database

    This final consensus map has allowed us to map a larger number of markers than possible in any individual map of sorghum, to obtain a more complete coverage of the sorghum genome and to fill a number of gaps on individual maps. In addition to overall general consistency of marker order across indiv...

  2. Airborne laser swath mapping of the Denton Hills, Transantarctic Mountains, Antarctica: Applications for structural and glacial geomorphic mapping

    USGS Publications Warehouse

    Wilson, Terry; Csathó, Beata

    2007-01-01

    High-resolution digital elevation data acquired by airborne laser scanning (ALS) for the Denton Hills, along the coastal foothills of the Royal Society Range, Transantarctic Mountains, are examined for applications to bedrock and glacial geomorphic mapping. Digital elevation models (DEMs), displayed as shaded-relief images and slope maps, portray geomorphic landscape features in unprecedented detail across the region. Structures of both ductile and brittle origin, ranging in age from the Paleozoic to the Quaternary, can be mapped from the DEMs. Glacial features, providing a record of the limits of grounded ice, of lake paleoshorelines, and of proglacial lake-ice conveyor deposits, are also prominent on the DEMs. The ALS-derived topographic data have great potential for a range of mapping applications in regions of ice-free terrain in Antarctica

  3. Land use mapping and modelling for the Phoenix Quadrangle

    NASA Technical Reports Server (NTRS)

    Place, J. L. (Principal Investigator)

    1974-01-01

    The author has identified the following significant results. The mapping of generalized land use (level 1) from ERTS 1 images was shown to be feasible with better than 95% accuracy in the Phoenix quadrangle. The accuracy of level 2 mapping in urban areas is still a problem. Updating existing maps also proved to be feasible, especially in water categories and agricultural uses; however, expanding urban growth has presented with accuracy. ERTS 1 film images indicated where areas of change were occurring, thus aiding focusing-in for more detailed investigation. ERTS color composite transparencies provided a cost effective source of information for land use mapping of very large regions at small map scales.

  4. Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

    DOE PAGES

    Preciat Gonzalez, German A.; El Assal, Lemmer R. P.; Noronha, Alberto; ...

    2017-06-14

    The mechanism of each chemical reaction in a metabolic network can be represented as a set of atom mappings, each of which relates an atom in a substrate metabolite to an atom of the same element in a product metabolite. Genome-scale metabolic network reconstructions typically represent biochemistry at the level of reaction stoichiometry. However, a more detailed representation at the underlying level of atom mappings opens the possibility for a broader range of biological, biomedical and biotechnological applications than with stoichiometry alone. Complete manual acquisition of atom mapping data for a genome-scale metabolic network is a laborious process. However, manymore » algorithms exist to predict atom mappings. How do their predictions compare to each other and to manually curated atom mappings? For more than four thousand metabolic reactions in the latest human metabolic reconstruction, Recon 3D, we compared the atom mappings predicted by six atom mapping algorithms. We also compared these predictions to those obtained by manual curation of atom mappings for over five hundred reactions distributed among all top level Enzyme Commission number classes. Five of the evaluated algorithms had similarly high prediction accuracy of over 91% when compared to manually curated atom mapped reactions. On average, the accuracy of the prediction was highest for reactions catalysed by oxidoreductases and lowest for reactions catalysed by ligases. In addition to prediction accuracy, the algorithms were evaluated on their accessibility, their advanced features, such as the ability to identify equivalent atoms, and their ability to map hydrogen atoms. In addition to prediction accuracy, we found that software accessibility and advanced features were fundamental to the selection of an atom mapping algorithm in practice.« less

  5. Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Preciat Gonzalez, German A.; El Assal, Lemmer R. P.; Noronha, Alberto

    The mechanism of each chemical reaction in a metabolic network can be represented as a set of atom mappings, each of which relates an atom in a substrate metabolite to an atom of the same element in a product metabolite. Genome-scale metabolic network reconstructions typically represent biochemistry at the level of reaction stoichiometry. However, a more detailed representation at the underlying level of atom mappings opens the possibility for a broader range of biological, biomedical and biotechnological applications than with stoichiometry alone. Complete manual acquisition of atom mapping data for a genome-scale metabolic network is a laborious process. However, manymore » algorithms exist to predict atom mappings. How do their predictions compare to each other and to manually curated atom mappings? For more than four thousand metabolic reactions in the latest human metabolic reconstruction, Recon 3D, we compared the atom mappings predicted by six atom mapping algorithms. We also compared these predictions to those obtained by manual curation of atom mappings for over five hundred reactions distributed among all top level Enzyme Commission number classes. Five of the evaluated algorithms had similarly high prediction accuracy of over 91% when compared to manually curated atom mapped reactions. On average, the accuracy of the prediction was highest for reactions catalysed by oxidoreductases and lowest for reactions catalysed by ligases. In addition to prediction accuracy, the algorithms were evaluated on their accessibility, their advanced features, such as the ability to identify equivalent atoms, and their ability to map hydrogen atoms. In addition to prediction accuracy, we found that software accessibility and advanced features were fundamental to the selection of an atom mapping algorithm in practice.« less

  6. Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D.

    PubMed

    Preciat Gonzalez, German A; El Assal, Lemmer R P; Noronha, Alberto; Thiele, Ines; Haraldsdóttir, Hulda S; Fleming, Ronan M T

    2017-06-14

    The mechanism of each chemical reaction in a metabolic network can be represented as a set of atom mappings, each of which relates an atom in a substrate metabolite to an atom of the same element in a product metabolite. Genome-scale metabolic network reconstructions typically represent biochemistry at the level of reaction stoichiometry. However, a more detailed representation at the underlying level of atom mappings opens the possibility for a broader range of biological, biomedical and biotechnological applications than with stoichiometry alone. Complete manual acquisition of atom mapping data for a genome-scale metabolic network is a laborious process. However, many algorithms exist to predict atom mappings. How do their predictions compare to each other and to manually curated atom mappings? For more than four thousand metabolic reactions in the latest human metabolic reconstruction, Recon 3D, we compared the atom mappings predicted by six atom mapping algorithms. We also compared these predictions to those obtained by manual curation of atom mappings for over five hundred reactions distributed among all top level Enzyme Commission number classes. Five of the evaluated algorithms had similarly high prediction accuracy of over 91% when compared to manually curated atom mapped reactions. On average, the accuracy of the prediction was highest for reactions catalysed by oxidoreductases and lowest for reactions catalysed by ligases. In addition to prediction accuracy, the algorithms were evaluated on their accessibility, their advanced features, such as the ability to identify equivalent atoms, and their ability to map hydrogen atoms. In addition to prediction accuracy, we found that software accessibility and advanced features were fundamental to the selection of an atom mapping algorithm in practice.

  7. Fuel loads and fuel type mapping

    USGS Publications Warehouse

    Chuvieco, Emilio; Riaño, David; Van Wagtendonk, Jan W.; Morsdof, Felix; Chuvieco, Emilio

    2003-01-01

    Correct description of fuel properties is critical to improve fire danger assessment and fire behaviour modeling, since they guide both fire ignition and fire propagation. This chapter deals with properties of fuel that can be considered static in short periods of time: biomass loads, plant geometry, compactness, etc. Mapping these properties require a detail knowledge of vegetation vertical and horizontal structure. Several systems to classify the great diversity of vegetation characteristics in few fuel types are described, as well as methods for mapping them with special emphasis on those based on remote sensing images.

  8. High-Resolution Thermal Inertia Mapping from the Mars Global Surveyor Thermal Emission Spectrometer

    USGS Publications Warehouse

    Mellon, M.T.; Jakosky, B.M.; Kieffer, H.H.; Christensen, P.R.

    2000-01-01

    High-resolution thermal inertia mapping results are presented, derived from Mars Global Surveyor (MGS) Thermal Emission Spectrometer (TES) observations of the surface temperature of Mars obtained during the early portion of the MGS mapping mission. Thermal inertia is the key property controlling the diurnal surface temperature variations, and is dependent on the physical character of the top few centimeters of the surface. It represents a complex combination of particle size, rock abundance, exposures of bedrock, and degree of induration. In this work we describe the derivation of thermal inertia from TES data, present global scale analysis, and place these results into context with earlier work. A global map of nighttime thermal-bolometer-based thermal inertia is presented at 14?? per pixel resolution, with approximately 63% coverage between 50??S and 70??N latitude. Global analysis shows a similar pattern of high and low thermal inertia as seen in previous Viking low-resolution mapping. Significantly more detail is present in the high-resolution TES thermal inertia. This detail represents horizontal small-scale variability in the nature of the surface. Correlation with albedo indicates the presence of a previously undiscovered surface unit of moderate-to-high thermal inertia and intermediate albedo. This new unit has a modal peak thermal inertia of 180-250 J m-2 K-1 s-12 and a narrow range of albedo near 0.24. The unit, covering a significant fraction of the surface, typically surrounds the low thermal inertia regions and may comprise a deposit of indurated fine material. Local 3-km-resolution maps are also presented as examples of eolian, fluvial, and volcanic geology. Some impact crater rims and intracrater dunes show higher thermal inertias than the surrounding terrain; thermal inertia of aeolian deposits such as intracrater dunes may be related to average particle size. Outflow channels and valleys consistently show higher thermal inertias than the

  9. Preliminary surficial geologic map of the Newberry Springs 30' x 60' quadrangle, California

    USGS Publications Warehouse

    Phelps, G.A.; Bedford, D.R.; Lidke, D.J.; Miller, D.M.; Schmidt, K.M.

    2012-01-01

    The Newberry Springs 30' x 60' quadrangle is located in the central Mojave Desert of southern California. It is split approximately into northern and southern halves by I-40, with the city of Barstow at its western edge and the town of Ludlow near its eastern edge. The map area spans lat 34°30 to 35° N. to long -116 °to -117° W. and covers over 1,000 km2. We integrate the results of surficial geologic mapping conducted during 2002-2005 with compilations of previous surficial mapping and bedrock geologic mapping. Quaternary units are subdivided in detail on the map to distinguish variations in age, process of formation, pedogenesis, lithology, and spatial interdependency, whereas pre-Quaternary bedrock units are grouped into generalized assemblages that emphasize their attributes as hillslope-forming materials and sources of parent material for the Quaternary units. The spatial information in this publication is presented in two forms: a spatial database and a geologic map. The geologic map is a view (the display of an extracted subset of the database at a given time) of the spatial database; it highlights key aspects of the database and necessarily does not show all of the data contained therein. The database contains detailed information about Quaternary geologic unit composition, authorship, and notes regarding geologic units, faults, contacts, and local vegetation. The amount of information contained in the database is too large to show on a single map, so a restricted subset of the information was chosen to summarize the overall nature of the geology. Refer to the database for additional information. Accompanying the spatial data are the map documentation and spatial metadata. The map documentation (this document) describes the geologic setting and history of the Newberry Springs map sheet, summarizes the age and physical character of each map unit, and describes principal faults and folds. The Federal Geographic Data Committee (FGDC) compliant metadata

  10. Detailed and reduced chemical-kinetic descriptions for hydrocarbon combustion

    NASA Astrophysics Data System (ADS)

    Petrova, Maria V.

    Numerical and theoretical studies of autoignition processes of fuels such as propane are in need of realistic simplified chemical-kinetic descriptions that retain the essential features of the detailed descriptions. These descriptions should be computationally feasible and cost-effective. Such descriptions are useful for investigating ignition processes that occur, for example, in homogeneous-charge compression-ignition engines, for studying the structures and dynamics of detonations and in fields such as multi-dimensional Computational Fluid Dynamics (CFD). Reduced chemistry has previously been developed successfully for a number of other hydrocarbon fuels, however, propane has not been considered in this manner. This work focuses on the fuels of propane, as well propene, allene and propyne, for several reasons. The ignition properties of propane resemble those of other higher hydrocarbons but are different from those of the lower hydrocarbons (e.g. ethylene and acetylene). Propane, therefore, may be the smallest hydrocarbon that is representative of higher hydrocarbons in ignition and detonation processes. Since the overall activation energy and ignition times for propane are similar to those of other higher hydrocarbons, including liquid fuels that are suitable for many applications, propane has been used as a model fuel for several numerical and experimental studies. The reason for studying elementary chemistry of propene and C3H4 (allene or propyne) is that during the combustion process, propane breaks down to propene and C3H4 before proceeding to products. Similarly, propene combustion includes C3H4 chemistry. In studying propane combustion, it is therefore necessary to understand the underlying combustion chemistry of propene as well as C3H 4. The first part of this thesis focuses on obtaining and testing a detailed chemical-kinetic description for autoignition of propane, propene and C 3H4, by comparing predictions obtained with this detailed mechanism

  11. a Conceptual Framework for Indoor Mapping by Using Grammars

    NASA Astrophysics Data System (ADS)

    Hu, X.; Fan, H.; Zipf, A.; Shang, J.; Gu, F.

    2017-09-01

    Maps are the foundation of indoor location-based services. Many automatic indoor mapping approaches have been proposed, but they rely highly on sensor data, such as point clouds and users' location traces. To address this issue, this paper presents a conceptual framework to represent the layout principle of research buildings by using grammars. This framework can benefit the indoor mapping process by improving the accuracy of generated maps and by dramatically reducing the volume of the sensor data required by traditional reconstruction approaches. In addition, we try to present more details of partial core modules of the framework. An example using the proposed framework is given to show the generation process of a semantic map. This framework is part of an ongoing research for the development of an approach for reconstructing semantic maps.

  12. Automatic Generation of Building Models with Levels of Detail 1-3

    NASA Astrophysics Data System (ADS)

    Nguatem, W.; Drauschke, M.; Mayer, H.

    2016-06-01

    We present a workflow for the automatic generation of building models with levels of detail (LOD) 1 to 3 according to the CityGML standard (Gröger et al., 2012). We start with orienting unsorted image sets employing (Mayer et al., 2012), we compute depth maps using semi-global matching (SGM) (Hirschmüller, 2008), and fuse these depth maps to reconstruct dense 3D point clouds (Kuhn et al., 2014). Based on planes segmented from these point clouds, we have developed a stochastic method for roof model selection (Nguatem et al., 2013) and window model selection (Nguatem et al., 2014). We demonstrate our workflow up to the export into CityGML.

  13. Mapping process and age of Quaternary deposits on Santa Rosa Island, Channel Islands National Park, California

    NASA Astrophysics Data System (ADS)

    Schmidt, K. M.; Minor, S. A.; Bedford, D.

    2016-12-01

    Employing a geomorphic process-age classification scheme, we mapped the Quaternary surficial geology of Santa Rosa (SRI) within the Channel Islands National Park. This detailed (1:12,000 scale) map represents upland erosional transport processes and alluvial, fluvial, eolian, beach, marine terrace, mass wasting, and mixed depositional processes. Mapping was motivated through an agreement with the National Park Service and is intended to aid natural resource assessments, including post-grazing disturbance recovery and identification of mass wasting and tectonic hazards. We obtained numerous detailed geologic field observations, fossils for faunal identification as age control, and materials for numeric dating. This GPS-located field information provides ground truth for delineating map units and faults using GIS-based datasets- high-resolution (sub-meter) aerial imagery, LiDAR-based DEMs and derivative raster products. Mapped geologic units denote surface processes and Quaternary faults constrain deformation kinematics and rates, which inform models of landscape change. Significant findings include: 1) Flights of older Pleistocene (>120 ka) and possibly Pliocene marine terraces were identified beneath younger alluvial and eolian deposits at elevations as much as 275 m above modern sea level. Such elevated terraces suggest that SRI was a smaller, more submerged island in the late Neogene and (or) early Pleistocene prior to tectonic uplift. 2) Structural and geomorphic observations made along the potentially seismogenic SRI fault indicate a protracted slip history during the late Neogene and Quaternary involving early normal slip, later strike slip, and recent reverse slip. These changes in slip mode explain a marked contrast in island physiography across the fault. 3) Many of the steeper slopes are dramatically stripped of regolith, with exposed bedrock and deeply incised gullies, presumably due effects related to past grazing practices. 4) Surface water presence is

  14. Cardiac tissue slices: preparation, handling, and successful optical mapping.

    PubMed

    Wang, Ken; Lee, Peter; Mirams, Gary R; Sarathchandra, Padmini; Borg, Thomas K; Gavaghan, David J; Kohl, Peter; Bollensdorff, Christian

    2015-05-01

    Cardiac tissue slices are becoming increasingly popular as a model system for cardiac electrophysiology and pharmacology research and development. Here, we describe in detail the preparation, handling, and optical mapping of transmembrane potential and intracellular free calcium concentration transients (CaT) in ventricular tissue slices from guinea pigs and rabbits. Slices cut in the epicardium-tangential plane contained well-aligned in-slice myocardial cell strands ("fibers") in subepicardial and midmyocardial sections. Cut with a high-precision slow-advancing microtome at a thickness of 350 to 400 μm, tissue slices preserved essential action potential (AP) properties of the precutting Langendorff-perfused heart. We identified the need for a postcutting recovery period of 36 min (guinea pig) and 63 min (rabbit) to reach 97.5% of final steady-state values for AP duration (APD) (identified by exponential fitting). There was no significant difference between the postcutting recovery dynamics in slices obtained using 2,3-butanedione 2-monoxime or blebistatin as electromechanical uncouplers during the cutting process. A rapid increase in APD, seen after cutting, was caused by exposure to ice-cold solution during the slicing procedure, not by tissue injury, differences in uncouplers, or pH-buffers (bicarbonate; HEPES). To characterize intrinsic patterns of CaT, AP, and conduction, a combination of multipoint and field stimulation should be used to avoid misinterpretation based on source-sink effects. In summary, we describe in detail the preparation, mapping, and data analysis approaches for reproducible cardiac tissue slice-based investigations into AP and CaT dynamics. Copyright © 2015 the American Physiological Society.

  15. Cardiac tissue slices: preparation, handling, and successful optical mapping

    PubMed Central

    Wang, Ken; Lee, Peter; Mirams, Gary R.; Sarathchandra, Padmini; Borg, Thomas K.; Gavaghan, David J.; Kohl, Peter

    2015-01-01

    Cardiac tissue slices are becoming increasingly popular as a model system for cardiac electrophysiology and pharmacology research and development. Here, we describe in detail the preparation, handling, and optical mapping of transmembrane potential and intracellular free calcium concentration transients (CaT) in ventricular tissue slices from guinea pigs and rabbits. Slices cut in the epicardium-tangential plane contained well-aligned in-slice myocardial cell strands (“fibers”) in subepicardial and midmyocardial sections. Cut with a high-precision slow-advancing microtome at a thickness of 350 to 400 μm, tissue slices preserved essential action potential (AP) properties of the precutting Langendorff-perfused heart. We identified the need for a postcutting recovery period of 36 min (guinea pig) and 63 min (rabbit) to reach 97.5% of final steady-state values for AP duration (APD) (identified by exponential fitting). There was no significant difference between the postcutting recovery dynamics in slices obtained using 2,3-butanedione 2-monoxime or blebistatin as electromechanical uncouplers during the cutting process. A rapid increase in APD, seen after cutting, was caused by exposure to ice-cold solution during the slicing procedure, not by tissue injury, differences in uncouplers, or pH-buffers (bicarbonate; HEPES). To characterize intrinsic patterns of CaT, AP, and conduction, a combination of multipoint and field stimulation should be used to avoid misinterpretation based on source-sink effects. In summary, we describe in detail the preparation, mapping, and data analysis approaches for reproducible cardiac tissue slice-based investigations into AP and CaT dynamics. PMID:25595366

  16. Integrated Sachs-Wolfe map reconstruction in the presence of systematic errors

    NASA Astrophysics Data System (ADS)

    Weaverdyck, Noah; Muir, Jessica; Huterer, Dragan

    2018-02-01

    The decay of gravitational potentials in the presence of dark energy leads to an additional, late-time contribution to anisotropies in the cosmic microwave background (CMB) at large angular scales. The imprint of this so-called integrated Sachs-Wolfe (ISW) effect to the CMB angular power spectrum has been detected and studied in detail, but reconstructing its spatial contributions to the CMB map, which would offer the tantalizing possibility of separating the early- from the late-time contributions to CMB temperature fluctuations, is more challenging. Here, we study the technique for reconstructing the ISW map based on information from galaxy surveys and focus in particular on how its accuracy is impacted by the presence of photometric calibration errors in input galaxy maps, which were previously found to be a dominant contaminant for ISW signal estimation. We find that both including tomographic information from a single survey and using data from multiple, complementary galaxy surveys improve the reconstruction by mitigating the impact of spurious power contributions from calibration errors. A high-fidelity reconstruction further requires one to account for the contribution of calibration errors to the observed galaxy power spectrum in the model used to construct the ISW estimator. We find that if the photometric calibration errors in galaxy surveys can be independently controlled at the level required to obtain unbiased dark energy constraints, then it is possible to reconstruct ISW maps with excellent accuracy using a combination of maps from two galaxy surveys with properties similar to Euclid and SPHEREx.

  17. NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps

    PubMed Central

    2013-01-01

    Background Molecular biology knowledge can be formalized and systematically represented in a computer-readable form as a comprehensive map of molecular interactions. There exist an increasing number of maps of molecular interactions containing detailed and step-wise description of various cell mechanisms. It is difficult to explore these large maps, to organize discussion of their content and to maintain them. Several efforts were recently made to combine these capabilities together in one environment, and NaviCell is one of them. Results NaviCell is a web-based environment for exploiting large maps of molecular interactions, created in CellDesigner, allowing their easy exploration, curation and maintenance. It is characterized by a combination of three essential features: (1) efficient map browsing based on Google Maps; (2) semantic zooming for viewing different levels of details or of abstraction of the map and (3) integrated web-based blog for collecting community feedback. NaviCell can be easily used by experts in the field of molecular biology for studying molecular entities of interest in the context of signaling pathways and crosstalk between pathways within a global signaling network. NaviCell allows both exploration of detailed molecular mechanisms represented on the map and a more abstract view of the map up to a top-level modular representation. NaviCell greatly facilitates curation, maintenance and updating the comprehensive maps of molecular interactions in an interactive and user-friendly fashion due to an imbedded blogging system. Conclusions NaviCell provides user-friendly exploration of large-scale maps of molecular interactions, thanks to Google Maps and WordPress interfaces, with which many users are already familiar. Semantic zooming which is used for navigating geographical maps is adopted for molecular maps in NaviCell, making any level of visualization readable. In addition, NaviCell provides a framework for community-based curation of maps

  18. NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps.

    PubMed

    Kuperstein, Inna; Cohen, David P A; Pook, Stuart; Viara, Eric; Calzone, Laurence; Barillot, Emmanuel; Zinovyev, Andrei

    2013-10-07

    Molecular biology knowledge can be formalized and systematically represented in a computer-readable form as a comprehensive map of molecular interactions. There exist an increasing number of maps of molecular interactions containing detailed and step-wise description of various cell mechanisms. It is difficult to explore these large maps, to organize discussion of their content and to maintain them. Several efforts were recently made to combine these capabilities together in one environment, and NaviCell is one of them. NaviCell is a web-based environment for exploiting large maps of molecular interactions, created in CellDesigner, allowing their easy exploration, curation and maintenance. It is characterized by a combination of three essential features: (1) efficient map browsing based on Google Maps; (2) semantic zooming for viewing different levels of details or of abstraction of the map and (3) integrated web-based blog for collecting community feedback. NaviCell can be easily used by experts in the field of molecular biology for studying molecular entities of interest in the context of signaling pathways and crosstalk between pathways within a global signaling network. NaviCell allows both exploration of detailed molecular mechanisms represented on the map and a more abstract view of the map up to a top-level modular representation. NaviCell greatly facilitates curation, maintenance and updating the comprehensive maps of molecular interactions in an interactive and user-friendly fashion due to an imbedded blogging system. NaviCell provides user-friendly exploration of large-scale maps of molecular interactions, thanks to Google Maps and WordPress interfaces, with which many users are already familiar. Semantic zooming which is used for navigating geographical maps is adopted for molecular maps in NaviCell, making any level of visualization readable. In addition, NaviCell provides a framework for community-based curation of maps.

  19. A High-Resolution SNP Array-Based Linkage Map Anchors a New Domestic Cat Draft Genome Assembly and Provides Detailed Patterns of Recombination.

    PubMed

    Li, Gang; Hillier, LaDeana W; Grahn, Robert A; Zimin, Aleksey V; David, Victor A; Menotti-Raymond, Marilyn; Middleton, Rondo; Hannah, Steven; Hendrickson, Sher; Makunin, Alex; O'Brien, Stephen J; Minx, Pat; Wilson, Richard K; Lyons, Leslie A; Warren, Wesley C; Murphy, William J

    2016-06-01

    High-resolution genetic and physical maps are invaluable tools for building accurate genome assemblies, and interpreting results of genome-wide association studies (GWAS). Previous genetic and physical maps anchored good quality draft assemblies of the domestic cat genome, enabling the discovery of numerous genes underlying hereditary disease and phenotypes of interest to the biomedical science and breeding communities. However, these maps lacked sufficient marker density to order thousands of shorter scaffolds in earlier assemblies, which instead relied heavily on comparative mapping with related species. A high-resolution map would aid in validating and ordering chromosome scaffolds from existing and new genome assemblies. Here, we describe a high-resolution genetic linkage map of the domestic cat genome based on genotyping 453 domestic cats from several multi-generational pedigrees on the Illumina 63K SNP array. The final maps include 58,055 SNP markers placed relative to 6637 markers with unique positions, distributed across all autosomes and the X chromosome. Our final sex-averaged maps span a total autosomal length of 4464 cM, the longest described linkage map for any mammal, confirming length estimates from a previous microsatellite-based map. The linkage map was used to order and orient the scaffolds from a substantially more contiguous domestic cat genome assembly (Felis catus v8.0), which incorporated ∼20 × coverage of Illumina fragment reads. The new genome assembly shows substantial improvements in contiguity, with a nearly fourfold increase in N50 scaffold size to 18 Mb. We use this map to report probable structural errors in previous maps and assemblies, and to describe features of the recombination landscape, including a massive (∼50 Mb) recombination desert (of virtually zero recombination) on the X chromosome that parallels a similar desert on the porcine X chromosome in both size and physical location. Copyright © 2016 Li et al.

  20. Geologic Map of the Eaton Reservoir Quadrangle, Larimer County, Colorado and Albany County, Wyoming

    USGS Publications Warehouse

    Workman, Jeremiah B.

    2008-01-01

    New geologic mapping of the Eaton Reservoir 7.5' quadrangle defines geologic relationships in the northern Front Range along the Colorado/Wyoming border approximately 35 km south of Laramie, Wyo. Previous mapping within the quadrangle was limited to regional reconnaissance mapping (Tweto, 1979; Camp, 1979; Burch, 1983) and some minor site-specific studies (Carlson and Marsh, 1986; W. Braddock, unpub. mapping, 1982). Braddock and others (1989) mapped the Diamond Peak 7.5' quadrangle to the east, Burch (1983) mapped rocks of the Rawah batholith to the south, W. Braddock (unpub. mapping, 1981) mapped the Sand Creek Pass 7.5' quadrangle to the west, and Ver Ploeg and Boyd (2000) mapped the Laramie 30' x 60' quadrangle to the north. Field work was completed during 2005 and 2006 and the mapping was compiled at a scale of 1:24,000. Minimal petrographic work and isotope dating was done in connection with the present mapping, but detailed petrographic and isotope studies were carried out on correlative map units in surrounding areas as part of a related regional study of the northern Front Range. Classification of Proterozoic rocks is primarily based upon field observation of bulk mineral composition, macroscopic textural features, and field relationships that allow for correlation with rocks studied in greater detail outside of the map area.

  1. The application of remotely sensed data to pedologic and geomorphic mapping on alluvial fan and playa surfaces in Saline Valley, California

    NASA Technical Reports Server (NTRS)

    Miller, D. A.; Petersen, G. W.; Kahle, A. B.

    1986-01-01

    Arid and semiarid regions yield excellent opportunities for the study of pedologic and geomorphic processes. The dominance of rock and soil exposure over vegetation not only provides the ground observer with observational possibilities but also affords good opportunities for measurement by aircraft and satellite remote sensor devices. Previous studies conducted in the area of pedologic and geomorphic mapping in arid regions with remotely sensed data have utilized information obtained in the visible to near-infrared portion of the spectrum. Thermal Infrared Multispectral Scanner (TIMS) and Thematic Mapping (TM) data collected in 1984 are being used in comjunction with maps compiled during a Bureau of Land Management (BLM) soil survey to aid in a detailed mapping of alluvial fan and playa surfaces within the valley. The results from this study may yield valuable information concerning the application of thermal data and thermal/visible data combinations to the problem of dating pedologic and geomorphic features in arid regions.

  2. Detailed measurements of shower properties in a high granularity digital electromagnetic calorimeter

    NASA Astrophysics Data System (ADS)

    van der Kolk, N.

    2018-03-01

    The MAPS (Monolithic Active Pixel Sensors) prototype of the proposed ALICE Forward Calorimeter (FoCal) is the highest granularity electromagnetic calorimeter, with 39 million pixels with a size of 30 × 30 μm2. Particle showers can be studied with unprecedented detail with this prototype. Electromagnetic showers at energies between 2 GeV and 244 GeV have been studied and compared with GEANT4 simulations. Simulation models can be tested in more detail than ever before and the differences observed between FoCal data and GEANT4 simulations illustrate that improvements in electromagnetic models are still possible.

  3. A detailed procedure for the use of small-scale photography in land use classification

    NASA Technical Reports Server (NTRS)

    Vegas, P. L.

    1974-01-01

    A procedure developed to produce accurate land use maps from available high-altitude, small-scale photography in a cost-effective manner is presented. An alternative procedure, for use when the capability for updating the resultant land use map is not required, is also presented. The technical approach is discussed in detail, and personnel and equipment needs are analyzed. Accuracy percentages are listed, and costs are cited. The experiment land use classification categories are explained, and a proposed national land use classification system is recommended.

  4. Nasa's Planetary Geologic Mapping Program: Overview

    NASA Astrophysics Data System (ADS)

    Williams, D. A.

    2016-06-01

    NASA's Planetary Science Division supports the geologic mapping of planetary surfaces through a distinct organizational structure and a series of research and analysis (R&A) funding programs. Cartography and geologic mapping issues for NASA's planetary science programs are overseen by the Mapping and Planetary Spatial Infrastructure Team (MAPSIT), which is an assessment group for cartography similar to the Mars Exploration Program Assessment Group (MEPAG) for Mars exploration. MAPSIT's Steering Committee includes specialists in geological mapping, who make up the Geologic Mapping Subcommittee (GEMS). I am the GEMS Chair, and with a group of 3-4 community mappers we advise the U.S. Geological Survey Planetary Geologic Mapping Coordinator (Dr. James Skinner) and develop policy and procedures to aid the planetary geologic mapping community. GEMS meets twice a year, at the Annual Lunar and Planetary Science Conference in March, and at the Annual Planetary Mappers' Meeting in June (attendance is required by all NASA-funded geologic mappers). Funding programs under NASA's current R&A structure to propose geological mapping projects include Mars Data Analysis (Mars), Lunar Data Analysis (Moon), Discovery Data Analysis (Mercury, Vesta, Ceres), Cassini Data Analysis (Saturn moons), Solar System Workings (Venus or Jupiter moons), and the Planetary Data Archiving, Restoration, and Tools (PDART) program. Current NASA policy requires all funded geologic mapping projects to be done digitally using Geographic Information Systems (GIS) software. In this presentation we will discuss details on how geologic mapping is done consistent with current NASA policy and USGS guidelines.

  5. Object-Based Classification of Ikonos Imagery for Mapping Large-Scale Vegetation Communities in Urban Areas.

    PubMed

    Mathieu, Renaud; Aryal, Jagannath; Chong, Albert K

    2007-11-20

    Effective assessment of biodiversity in cities requires detailed vegetation maps.To date, most remote sensing of urban vegetation has focused on thematically coarse landcover products. Detailed habitat maps are created by manual interpretation of aerialphotographs, but this is time consuming and costly at large scale. To address this issue, wetested the effectiveness of object-based classifications that use automated imagesegmentation to extract meaningful ground features from imagery. We applied thesetechniques to very high resolution multispectral Ikonos images to produce vegetationcommunity maps in Dunedin City, New Zealand. An Ikonos image was orthorectified and amulti-scale segmentation algorithm used to produce a hierarchical network of image objects.The upper level included four coarse strata: industrial/commercial (commercial buildings),residential (houses and backyard private gardens), vegetation (vegetation patches larger than0.8/1ha), and water. We focused on the vegetation stratum that was segmented at moredetailed level to extract and classify fifteen classes of vegetation communities. The firstclassification yielded a moderate overall classification accuracy (64%, κ = 0.52), which ledus to consider a simplified classification with ten vegetation classes. The overallclassification accuracy from the simplified classification was 77% with a κ value close tothe excellent range (κ = 0.74). These results compared favourably with similar studies inother environments. We conclude that this approach does not provide maps as detailed as those produced by manually interpreting aerial photographs, but it can still extract ecologically significant classes. It is an efficient way to generate accurate and detailed maps in significantly shorter time. The final map accuracy could be improved by integrating segmentation, automated and manual classification in the mapping process, especially when considering important vegetation classes with limited spectral contrast.

  6. The status of soil mapping for the Idaho National Engineering Laboratory

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Olson, G.L.; Lee, R.D.; Jeppesen, D.J.

    This report discusses the production of a revised version of the general soil map of the 2304-km{sup 2} (890-mi{sup 2}) Idaho National Engineering Laboratory (INEL) site in southeastern Idaho and the production of a geographic information system (GIS) soil map and supporting database. The revised general soil map replaces an INEL soil map produced in 1978 and incorporates the most current information on INEL soils. The general soil map delineates large soil associations based on National Resources Conservation Services [formerly the Soil Conservation Service (SCS)] principles of soil mapping. The GIS map incorporates detailed information that could not be presentedmore » on the general soil map and is linked to a database that contains the soil map unit descriptions, surficial geology codes, and other pertinent information.« less

  7. Simulated Flyover of Mars Canyon Map Animation

    NASA Image and Video Library

    2014-12-12

    This frame from an animation simulates a flyover of a portion of a Martian canyon detailed in a geological map produced by the U.S. Geological Survey and based on observations by the HiRISE camera on NASA Mars Reconnaissance Orbiter.

  8. Folding Digital Mapping into a Traditional Field Camp Program

    NASA Astrophysics Data System (ADS)

    Kelley, D. F.

    2011-12-01

    Louisiana State University runs a field camp with a permanent fixed-base which has continually operated since 1928 in the Front Range just to the south of Colorado Springs, CO. The field camp program which offers a 6-credit hour course in Field Geology follows a very traditional structure. The first week is spent collecting data for the construction of a detailed stratigraphic column of the local geology. The second week is spent learning the skills of geologic mapping, while the third applies these skills to a more geologically complicated mapping area. The final three weeks of the field camp program are spent studying and mapping igneous and metamorphic rocks as well as conducting a regional stratigraphic correlation exercise. Historically there has been a lack of technology involved in this program. All mapping has been done in the field without the use of any digital equipment and all products have been made in the office without the use of computers. In the summer of 2011 the use of GPS units, and GIS software were introduced to the program. The exercise that was chosen for this incorporation of technology was one in which metamorphic rocks are mapped within Golden Gate Canyon State Park in Colorado. This same mapping exercise was carried out during the 2010 field camp session with no GPS or GIS use. The students in both groups had the similar geologic backgrounds, similar grade point averages, and similar overall performances at field camp. However, the group that used digital mapping techniques mapped the field area more quickly and reportedly with greater ease. Additionally, the students who used GPS and GIS included more detailed rock descriptions with their final maps indicating that they spent less time in the field focusing on mapping contacts between units. The outcome was a better overall product. The use of GPS units also indirectly caused the students to produce better field maps. In addition to greater ease in mapping, the use of GIS software to

  9. Magnetic structure of Bayonnaise knoll caldera including Hakurei hydrothermal site obtained from near-bottom magnetic vector field mapping by autonomous underwater vehicle

    NASA Astrophysics Data System (ADS)

    Honsho, C.; Ura, T.; Kim, K.

    2012-12-01

    The Bayonnaise knoll caldera is one of the silicic submarine calderas in the Izu-Ogasawara Arc in Japan. In 2003, a large-scale hydrothermal deposit was found in the caldera, called the Hakurei deposit. The caldera had been explored by four surveys using autonomous underwater vehicles (AUVs) from 2008 to 2011, and the near-bottom magnetic field was mapped over about 75% of the caldera floor. We carried out detailed correction for the magnetic field produced by the vehicle body, which allowed us to take advantage of the vector anomaly instead of the total anomaly for the magnetic inversion. We applied the inversion method using the block model together with the Akaike's Bayesian information criterion (ABIC). One remarkable thing is that we recognized significant difference between the magnetic inversion result using the vector anomaly and that using the total anomaly: the latter result explains the observed total anomalies excellently, but does not explain the vector anomalies adequately. Except for a rare case where the vector anomaly is perpendicular to the main field throughout, the total anomaly should be sufficient for evaluating the entire field, provided that the data is collected in sufficiently high density. In fact, the track lines of our survey sometimes separate from each other by about twice the altitude of the vehicle (100 m), which can lead to considerable aliasing in the sampled field. The vector anomaly can provide vital information in such a situation. The obtained magnetization distribution is well correlated with the topography. The caldera rim and central cone have weak magnetization, which is consistent with the fact that they consist of dacite rocks. On the other hand, the caldera floor shows high magnetization, which implies the existence of basaltic rocks. The high magnetization appears to continue north and south beyond the caldera rim, forming an NS-trending high magnetization zone. Because the caldera floor is generally covered with

  10. Accuracy and precision of stream reach water surface slopes estimated in the field and from maps

    USGS Publications Warehouse

    Isaak, D.J.; Hubert, W.A.; Krueger, K.L.

    1999-01-01

    The accuracy and precision of five tools used to measure stream water surface slope (WSS) were evaluated. Water surface slopes estimated in the field with a clinometer or from topographic maps used in conjunction with a map wheel or geographic information system (GIS) were significantly higher than WSS estimated in the field with a surveying level (biases of 34, 41, and 53%, respectively). Accuracy of WSS estimates obtained with an Abney level did not differ from surveying level estimates, but conclusions regarding the accuracy of Abney levels and clinometers were weakened by intratool variability. The surveying level estimated WSS most precisely (coefficient of variation [CV] = 0.26%), followed by the GIS (CV = 1.87%), map wheel (CV = 6.18%), Abney level (CV = 13.68%), and clinometer (CV = 21.57%). Estimates of WSS measured in the field with an Abney level and estimated for the same reaches with a GIS used in conjunction with l:24,000-scale topographic maps were significantly correlated (r = 0.86), but there was a tendency for the GIS to overestimate WSS. Detailed accounts of the methods used to measure WSS and recommendations regarding the measurement of WSS are provided.

  11. Geologic Map of the Thaumasia Region, Mars

    USGS Publications Warehouse

    Dohm, Janes M.; Tanaka, Kenneth L.; Hare, Trent M.

    2001-01-01

    ). The medium-resolution Viking images used for mapping and base preparation also formed the basis of the 1:2,000,000 scale subquadrangle series. Earlier geologic maps of all or parts of the region include: (1) maps of the Phoenicis Lacus, Coprates, Thaumasia, and Argyre quadrangles at 1:5,000,000 scale based mainly on Mariner 9 images (respectively, Masursky and others, 1978; McCauley, 1978; McGill, 1978; and Hodges, 1980), (2) the global map of Mars at 1:25,000,000 (Scott and Carr, 1978) compiled largely from the 1:5,000,000 scale geologic maps, (3) maps showing lava flows in the Tharsis region at 1:2,000,000 scale compiled from Viking and Mariner 9 images (Scott, 1981; Scott and Tanaka, 1981a, b; Scott and others, 1981), (4) the map of the western equatorial region of Mars at 1:15,000,000 scale based on Viking images (Scott and Tanaka, 1986), and (5) the map of the Valles Marineris region at 1:2,000,000 scale compiled from Viking images (Witbeck and others, 1991). The previous maps have described the overall geology and geomorphology of the region but have not unraveled the detailed stratigraphy and complex evolution of this unique and geologically diverse martian province. The main purpose of this comprehensive mapping project is to reconstruct the stratigraphic, structural, and erosional histories of the Thaumasia region. The region is the last major province of the Tharsis region to undergo detailed structural mapping using Viking images; its history is essential to documenting the overall tectonic history of Tharsis. Other provinces of Tharsis that have been structurally mapped include Syria Planum (Tanaka and Davis, 1988), Tempe Terra and Ulysses Patera (Scott and Dohm, 1990b), and Alba Patera (Tanaka, 1990). Another primary mapping objective is to determine the region's volcanic history and assess the relations among fault systems and volcanoes (Wise and others, 1979; Scott and Tanaka, 1980; Whitford-Stark, 1982; Scott and Dohm, 1990a). A secondary mapping

  12. Creating soil moisture maps based on radar satellite imagery

    NASA Astrophysics Data System (ADS)

    Hnatushenko, Volodymyr; Garkusha, Igor; Vasyliev, Volodymyr

    2017-10-01

    The presented work is related to a study of mapping soil moisture basing on radar data from Sentinel-1 and a test of adequacy of the models constructed on the basis of data obtained from alternative sources. Radar signals are reflected from the ground differently, depending on its properties. In radar images obtained, for example, in the C band of the electromagnetic spectrum, soils saturated with moisture usually appear in dark tones. Although, at first glance, the problem of constructing moisture maps basing on radar data seems intuitively clear, its implementation on the basis of the Sentinel-1 data on an industrial scale and in the public domain is not yet available. In the process of mapping, for verification of the results, measurements of soil moisture obtained from logs of the network of climate stations NOAA US Climate Reference Network (USCRN) were used. This network covers almost the entire territory of the United States. The passive microwave radiometers of Aqua and SMAP satellites data are used for comparing processing. In addition, other supplementary cartographic materials were used, such as maps of soil types and ready moisture maps. The paper presents a comparison of the effect of the use of certain methods of roughening the quality of radar data on the result of mapping moisture. Regression models were constructed showing dependence of backscatter coefficient values Sigma0 for calibrated radar data of different spatial resolution obtained at different times on soil moisture values. The obtained soil moisture maps of the territories of research, as well as the conceptual solutions about automation of operations of constructing such digital maps, are presented. The comparative assessment of the time required for processing a given set of radar scenes with the developed tools and with the ESA SNAP product was carried out.

  13. Complex mapping of aerofoils - a different perspective

    NASA Astrophysics Data System (ADS)

    Matthews, Miccal T.

    2012-01-01

    In this article an application of conformal mapping to aerofoil theory is studied from a geometric and calculus point of view. The problem is suitable for undergraduate teaching in terms of a project or extended piece of work, and brings together the concepts of geometric mapping, parametric equations, complex numbers and calculus. The Joukowski and Karman-Trefftz aerofoils are studied, and it is shown that the Karman-Trefftz aerofoil is an improvement over the Joukowski aerofoil from a practical point of view. For the most part only a spreadsheet program and pen and paper is required, only for the last portion of the study of the Karman-Trefftz aerofoils a symbolic computer package is employed. Ignoring the concept of a conformal mapping and instead viewing the problem from a parametric point of view, some interesting mappings are obtained. By considering the derivative of the mapped mapping via the chain rule, some new and interesting analytical results are obtained for the Joukowski aerofoil, and numerical results for the Karman-Trefftz aerofoil.

  14. Mapping small molecule binding data to structural domains

    PubMed Central

    2012-01-01

    Background Large-scale bioactivity/SAR Open Data has recently become available, and this has allowed new analyses and approaches to be developed to help address the productivity and translational gaps of current drug discovery. One of the current limitations of these data is the relative sparsity of reported interactions per protein target, and complexities in establishing clear relationships between bioactivity and targets using bioinformatics tools. We detail in this paper the indexing of targets by the structural domains that bind (or are likely to bind) the ligand within a full-length protein. Specifically, we present a simple heuristic to map small molecule binding to Pfam domains. This profiling can be applied to all proteins within a genome to give some indications of the potential pharmacological modulation and regulation of all proteins. Results In this implementation of our heuristic, ligand binding to protein targets from the ChEMBL database was mapped to structural domains as defined by profiles contained within the Pfam-A database. Our mapping suggests that the majority of assay targets within the current version of the ChEMBL database bind ligands through a small number of highly prevalent domains, and conversely the majority of Pfam domains sampled by our data play no currently established role in ligand binding. Validation studies, carried out firstly against Uniprot entries with expert binding-site annotation and secondly against entries in the wwPDB repository of crystallographic protein structures, demonstrate that our simple heuristic maps ligand binding to the correct domain in about 90 percent of all assessed cases. Using the mappings obtained with our heuristic, we have assembled ligand sets associated with each Pfam domain. Conclusions Small molecule binding has been mapped to Pfam-A domains of protein targets in the ChEMBL bioactivity database. The result of this mapping is an enriched annotation of small molecule bioactivity data and a

  15. Low Altitude AVIRIS Data for Mapping Landform Types on West Ship Island, Mississippi

    NASA Technical Reports Server (NTRS)

    Spruce, Joseph; Otvos, Ervin; Giardino, Marco

    2002-01-01

    A chain of barrier islands provides protection against hurricanes and severe storms along the south and southeastern shores of the United States. Barrier island landform types can be spectrally similar and as small as a few meters across, making highly detailed maps difficult to produce. To determine whether high-resolution airborne hyperspectral imagery could provide detailed maps of barrier island landform types, we used low-altitude hyperspectral and multispectral imagery to map surface environments of West Ship Island, Mississippi. We employed 3.4-meter AVIRIS hyperspectral imagery acquired in July 1999 and 0.5-meter ADAR multispectral data acquired in November 1997. The data were co-registered to digital ortho aerial imagery, and the AVIRIS data was scaled to ground reflectance using ATREM software. Unsupervised classification of AVIRIS and ADAR data proceeded using ISODATA clustering techniques. The resulting landform maps were field-checked and compared to aerial photography and digital elevation maps. Preliminary analyses indicated that the AVIRIS classification mapped more landform types, while the ADAR-based map enabled smaller patches to be identified. Used together, these maps provided a means to assess landform distributions of West Ship Island before and after Hurricane Gorges. Classification accuracy is being addressed through photo-interpretation and field surveys of sample areas selected with stratified random sampling.

  16. Low Altitude AVIRIS Data for Mapping Landform Types on West Ship Island, Mississippi

    NASA Technical Reports Server (NTRS)

    Spruce, Joseph; Otvos, Ervin; Giardino, Marco

    2003-01-01

    A chain of barrier islands provides protection against hurricanes and severe storms along the southern and southeastern shores of the Unites States. Barrier island landform types can be spectrally similar and as small as a few meters across, making highly detailed maps difficult to produce. To determine whether high-resolution airborne hyperspectral imagery could provide detailed maps of barrier island landform types, we used low-altitude hyperspectral and multispectral imagery to map surface environments of West Ship Island, Mississippi. We employed 3.4 meter AVIRIS hyperspectral imagery acquired in July 1999 and 0.5 meter ADAR multispectral data acquired in November 1997. The data were co-registered to digital ortho aerial imagery, and the AVIRIS data was scaled to ground reflectance using ATREM software. Unsupervised classification of AVIRIS and ADAR data proceeded using ISODATA clustering techniques. The resulting landform maps were field-checked and compared to aerial photography and digital elevation maps. Preliminary analyses indicated that the AVIRIS classification mapped more landform types, while the ADAR-based map enabled smaller patches to be identified. Used together, these maps provided a means to assess landform distributions of West Ship Island before and after Hurricane Georges. Classification accuracy is being assessed through photo-interpretation and field surveys of sample areas selected with stratified random sampling.

  17. Probability mapping of scarred myocardium using texture and intensity features in CMR images

    PubMed Central

    2013-01-01

    Background The myocardium exhibits heterogeneous nature due to scarring after Myocardial Infarction (MI). In Cardiac Magnetic Resonance (CMR) imaging, Late Gadolinium (LG) contrast agent enhances the intensity of scarred area in the myocardium. Methods In this paper, we propose a probability mapping technique using Texture and Intensity features to describe heterogeneous nature of the scarred myocardium in Cardiac Magnetic Resonance (CMR) images after Myocardial Infarction (MI). Scarred tissue and non-scarred tissue are represented with high and low probabilities, respectively. Intermediate values possibly indicate areas where the scarred and healthy tissues are interwoven. The probability map of scarred myocardium is calculated by using a probability function based on Bayes rule. Any set of features can be used in the probability function. Results In the present study, we demonstrate the use of two different types of features. One is based on the mean intensity of pixel and the other on underlying texture information of the scarred and non-scarred myocardium. Examples of probability maps computed using the mean intensity of pixel and the underlying texture information are presented. We hypothesize that the probability mapping of myocardium offers alternate visualization, possibly showing the details with physiological significance difficult to detect visually in the original CMR image. Conclusion The probability mapping obtained from the two features provides a way to define different cardiac segments which offer a way to identify areas in the myocardium of diagnostic importance (like core and border areas in scarred myocardium). PMID:24053280

  18. Geodatabase model for global geologic mapping: concept and implementation in planetary sciences

    NASA Astrophysics Data System (ADS)

    Nass, Andrea

    2017-04-01

    One aim of the NASA Dawn mission is to generate global geologic maps of the asteroid Vesta and the dwarf planet Ceres. To accomplish this, the Dawn Science Team followed the technical recommendations for cartographic basemap production. The geological mapping campaign of Vesta was completed and published, but mapping of the dwarf planet Ceres is still ongoing. The tiling schema for the geological mapping is the same for both planetary bodies and for Ceres it is divided into two parts: four overview quadrangles (Survey Orbit, 415 m/pixel) and 15 more detailed quadrangles (High Altitude Mapping HAMO, 140 m/pixel). The first global geologic map was based on survey images (415 m/pixel). The combine 4 Survey quadrangles completed by HAMO data served as basis for generating a more detailed view of the geologic history and also for defining the chronostratigraphy and time scale of the dwarf planet. The most detailed view can be expected within the 15 mapping quadrangles based on HAMO resolution and completed by the Low Altitude Mapping (LAMO) data with 35 m/pixel. For the interpretative mapping process of each quadrangle one responsible mapper was assigned. Unifying the geological mapping of each quadrangle and bringing this together to regional and global valid statements is already a very time intensive task. However, another challenge that has to be accomplished is to consider how the 15 individual mappers can generate one homogenous GIS-based project (w.r.t. geometrical and visual character) thus produce a geologically-consistent final map. Our approach this challenge was already discussed for mapping of Vesta. To accommodate the map requirements regarding rules for data storage and database management, the computer-based GIS environment used for the interpretative mapping process must be designed in a way that it can be adjusted to the unique features of the individual investigation areas. Within this contribution the template will be presented that uses standards

  19. Prioritizing Seafloor Mapping for Washington’s Pacific Coast

    PubMed Central

    Battista, Timothy; Buja, Ken; Christensen, John; Hennessey, Jennifer; Lassiter, Katrina

    2017-01-01

    Remote sensing systems are critical tools used for characterizing the geological and ecological composition of the seafloor. However, creating comprehensive and detailed maps of ocean and coastal environments has been hindered by the high cost of operating ship- and aircraft-based sensors. While a number of groups (e.g., academic research, government resource management, and private sector) are engaged in or would benefit from the collection of additional seafloor mapping data, disparate priorities, dauntingly large data gaps, and insufficient funding have confounded strategic planning efforts. In this study, we addressed these challenges by implementing a quantitative, spatial process to facilitate prioritizing seafloor mapping needs in Washington State. The Washington State Prioritization Tool (WASP), a custom web-based mapping tool, was developed to solicit and analyze mapping priorities from each participating group. The process resulted in the identification of several discrete, high priority mapping hotspots. As a result, several of the areas have been or will be subsequently mapped. Furthermore, information captured during the process about the intended application of the mapping data was paramount for identifying the optimum remote sensing sensors and acquisition parameters to use during subsequent mapping surveys. PMID:28350338

  20. Development of Generation System of Simplified Digital Maps

    NASA Astrophysics Data System (ADS)

    Uchimura, Keiichi; Kawano, Masato; Tokitsu, Hiroki; Hu, Zhencheng

    In recent years, digital maps have been used in a variety of scenarios, including car navigation systems and map information services over the Internet. These digital maps are formed by multiple layers of maps of different scales; the map data most suitable for the specific situation are used. Currently, the production of map data of different scales is done by hand due to constraints related to processing time and accuracy. We conducted research concerning technologies for automatic generation of simplified map data from detailed map data. In the present paper, the authors propose the following: (1) a method to transform data related to streets, rivers, etc. containing widths into line data, (2) a method to eliminate the component points of the data, and (3) a method to eliminate data that lie below a certain threshold. In addition, in order to evaluate the proposed method, a user survey was conducted; in this survey we compared maps generated using the proposed method with the commercially available maps. From the viewpoint of the amount of data reduction and processing time, and on the basis of the results of the survey, we confirmed the effectiveness of the automatic generation of simplified maps using the proposed methods.

  1. Identification, definition and mapping of terrestrial ecosystems in interior Alaska

    NASA Technical Reports Server (NTRS)

    Anderson, J. H. (Principal Investigator)

    1973-01-01

    The author has identified the following significant results. A reconstituted, simulated color-infrared print, enlarged to a scale of 1:250,000, was used to make a vegetation map of a 3,110 sq km area just west of Fairbanks, Alaska. Information was traced from the print which comprised the southeastern part of ERTS-1 scene 1033-21011. A 1:1,000,000 scale color-infrared transparency of this scene, obtained from NASA, was used along side the print as an aid in recognizing colors, color intensities and blends, and mosaics of different colors. Color units on the transparency and print were identified according to vegetation types using NASA air photos, U.S. Forest Service air photos, and experience of the investigator. Five more or less pure colors were identified and associated with vegetation types. These colors were designated according to their appearances on the print: (1) orange for forest vegetation dominated by broad-leaved trees: (2) gray for forest vegetation dominated by needle-leaved trees; (3) violet for scrub vegetation; (4) light violet denoting herbaceous tundra vegetation; and (5) dull violet for muskeg vegetation. This study has shown, through close examinations of the NASA transparency, that much more detailed vegetation landscape, or ecosystem maps could be produced, if only spectral signatures could be consistently and reliably recognized and transferred to a map of suitable scale.

  2. Geologic Mapping of Athabasca Valles

    NASA Technical Reports Server (NTRS)

    Keszthelyi, L. P.; Jaeger, W. L.; Tanaka, K.; Hare, T.

    2008-01-01

    Two factors drive us to map the Athabasca Valles area in unusual detail: (1) the extremely well-preserved and exposed surface morphologies and (2) the extensive high resolution imaging. In particular, the near-complete CTX coverage of Athabasca Valles proper and the extensive coverage of its surroundings have been invaluable. The mapping has been done exclusively in ArcGIS, using individual CTX, THEMIS VIS, and MOC frames overlying the THEMIS IR daytime basemap. MOLA shot points and gridded DTMs are also included. It was found that CTX images processed through ISIS are almost always within 300 m of the MOLA derived locations, and usually within tens of meters, with no adjustments to camera pointing. THEMIS VIS images appear to be systematically shifted to the southwest of their correct positions and MOC images are often kilometers off. The good SNR and minimal artifacts make the CTX images vastly more useful than the THEMIS VIS or MOC images. The bulk of the mapping was done at 1:50,000 scale on CTX images. In more complex areas, mapping at 1:24,000 proved necessary. The CTX images were usually simultaneously viewed on a second monitor using the ISIS3 qview program to display the full dynamic range of the CTX data. Where CTX data was not available, mapping was often done at 1:100,000 and most contacts are mapped as approximate.

  3. Mapping Tropical Forest Change in the Greater Marañón and Ucayali regions of Peru using CLASlite

    NASA Astrophysics Data System (ADS)

    Perez-Leiva, P.; Knapp, D. E.; Clark, J. K.; Asner, G. P.

    2012-12-01

    The Carnegie Landsat Analysis System-lite (CLASlite) was used to map and monitor tropical forest change in two large tropical watersheds in Peru: Greater Marañón and Ucayali. CLASlite uses radiometric and atmospheric correction algorithms as well as an Automated Monte Carlo Unmixing (AutoMCU) to obtain consistent fractional land cover per-pixel at high spatial resolution. Fractional land cover is automatically extracted from universal spectral libraries which allow for a differentiation between live photosynthetic vegetation (PV), non-photosynthetic vegetation (NPV) and bare substrate (S). Fractional cover information is directly translated to maps of forest cover based in the physical characteristics of the forest canopy. Rates of deforestation and disturbance are estimated through analysis of change in fractional land cover over time. The Greater Marañón and Ucayali watersheds were studied over the period 1985 to 2012, through analysis of 1900 multi-spectral images from Landsat 4, 5 and 7. These images were processed and analyzed using CLASlite to obtain fractional cover and forest cover information for each year within the period. Annualization of the collected maps provided detailed information on the gross rates of disturbance and deforestation throughout the region. Further, net deforestation and disturbance maps were used to show the general forest change in these watersheds over the past 25 years. We found that deforestation accounts for just ~50% of the total forest losses, and that forest disturbance (degradation) is critically important to consider when making forest change estimates associated with losses in habitat and carbon in the region. These results also provide spatially-detailed, temporally-specific information on forest change for nearly three decades. Information provided by this study will assist decision-makers in Peru to improve their regional environmental management. The results, unprecedented in spatial and temporal scope, are

  4. Statistical-mechanical analysis of self-organization and pattern formation during the development of visual maps

    NASA Astrophysics Data System (ADS)

    Obermayer, K.; Blasdel, G. G.; Schulten, K.

    1992-05-01

    We report a detailed analytical and numerical model study of pattern formation during the development of visual maps, namely, the formation of topographic maps and orientation and ocular dominance columns in the striate cortex. Pattern formation is described by a stimulus-driven Markovian process, the self-organizing feature map. This algorithm generates topologically correct maps between a space of (visual) input signals and an array of formal ``neurons,'' which in our model represents the cortex. We define order parameters that are a function of the set of visual stimuli an animal perceives, and we demonstrate that the formation of orientation and ocular dominance columns is the result of a global instability of the retinoptic projection above a critical value of these order parameters. We characterize the spatial structure of the emerging patterns by power spectra, correlation functions, and Gabor transforms, and we compare model predictions with experimental data obtained from the striate cortex of the macaque monkey with optical imaging. Above the critical value of the order parameters the model predicts a lateral segregation of the striate cortex into (i) binocular regions with linear changes in orientation preference, where iso-orientation slabs run perpendicular to the ocular dominance bands, and (ii) monocular regions with low orientation specificity, which contain the singularities of the orientation map. Some of these predictions have already been verified by experiments.

  5. Harmonisation of geological data to support geohazard mapping: the case of eENVplus project

    NASA Astrophysics Data System (ADS)

    Cipolloni, Carlo; Krivic, Matija; Novak, Matevž; Pantaloni, Marco; Šinigoj, Jasna

    2014-05-01

    In the eENVplus project, which aims is to unlock huge amounts of environmental datamanaged by the national and regional environmental agencies and other public and private organisations, we have developed a cross-border pilot on the geological data harmonisation through the integration and harmonisation of existing services. The pilot analyses the methodology and results of the OneGeology-Europe project, elaborated at the scale of 1:1M, to point out difficulties and unsolved problems highlighted during the project. This preliminary analysis is followed by a comparison of two geological maps provided by the neighbouring countries with the objective to compare and define the geometric and semantic anomalous contacts between geological polygons and lines in the maps. This phase will be followed by a detailed scale geological map analysis aimed to solve the anomalies identified in the previous phase. The two Geological Surveys involved into the pilot will discuss the problems highlighted during this phase. Subsequently the semantic description will be redefined and the geometry of the polygons in geological maps will be redrawn or adjusted according to a lithostratigraphic approach that takes in account the homogeneity of age, lithology, depositional environment and consolidation degree of geological units. The two Geological Surveys have decided to apply the harmonisation process on two different dataset: the first is represented by the Geological Map at the scale of 1:1,000,000, partially harmonised within the OneGeology-Europe project that will be re-aligned with GE INSPIRE data model to produce data and services compliant with INSPIRE target schema. The main target of Geological Surveys is to produce data and web services compliant with the wider international schema, where there are more options to provide data, with specific attributes that are important to obtain the geohazard map as in the case of this pilot project; therefore we have decided to apply Geo

  6. High-Resolution Mapping of a Repeat Protein Folding Free Energy Landscape.

    PubMed

    Fossat, Martin J; Dao, Thuy P; Jenkins, Kelly; Dellarole, Mariano; Yang, Yinshan; McCallum, Scott A; Garcia, Angel E; Barrick, Doug; Roumestand, Christian; Royer, Catherine A

    2016-12-06

    A complete description of the pathways and mechanisms of protein folding requires a detailed structural and energetic characterization of the conformational ensemble along the entire folding reaction coordinate. Simulations can provide this level of insight for small proteins. In contrast, with the exception of hydrogen exchange, which does not monitor folding directly, experimental studies of protein folding have not yielded such structural and energetic detail. NMR can provide residue specific atomic level structural information, but its implementation in protein folding studies using chemical or temperature perturbation is problematic. Here we present a highly detailed structural and energetic map of the entire folding landscape of the leucine-rich repeat protein, pp32 (Anp32), obtained by combining pressure-dependent site-specific 1 H- 15 N HSQC data with coarse-grained molecular dynamics simulations. The results obtained using this equilibrium approach demonstrate that the main barrier to folding of pp32 is quite broad and lies near the unfolded state, with structure apparent only in the C-terminal region. Significant deviation from two-state unfolding under pressure reveals an intermediate on the folded side of the main barrier in which the N-terminal region is disordered. A nonlinear temperature dependence of the population of this intermediate suggests a large heat capacity change associated with its formation. The combination of pressure, which favors the population of folding intermediates relative to chemical denaturants; NMR, which allows their observation; and constrained structure-based simulations yield unparalleled insight into protein folding mechanisms. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  7. Magnetic electroanatomical mapping for ablation of focal atrial tachycardias.

    PubMed

    Marchlinski, F; Callans, D; Gottlieb, C; Rodriguez, E; Coyne, R; Kleinman, D

    1998-08-01

    Uniform success for ablation of focal atrial tachycardias has been difficult to achieve using standard catheter mapping and ablation techniques. In addition, our understanding of the complex relationship between atrial anatomy, electrophysiology, and surface ECG P wave morphology remains primitive. The magnetic electroanatomical mapping and display system (CARTO) offers an on-line display of electrical activation and/or signal amplitude related to the anatomical location of the recorded sites in the mapped chamber. A window of electrical interest is established based on signals timed from an electrical reference that usually represents a fixed electrogram recording from the coronary sinus or the atrial appendage. This window of electrical interest is established to include atrial activation prior to the onset of the P wave activity associated with the site of origin of a focal atrial tachycardia. Anatomical and electrical landmarks are defined with limited fluoroscopic imaging support and more detailed global chamber and more focal atrial mapping can be performed with minimal fluoroscopic guidance. A three-dimensional color map representing atrial activation or voltage amplitude at the magnetically defined anatomical sites is displayed with on-line data acquisition. This display can be manipulated to facilitate viewing from any angle. Altering the zoom control, triangle fill threshold, clipping plane, or color range can all enhance the display of a more focal area of interest. We documented the feasibility of using this single mapping catheter technique for localizing and ablating focal atrial tachycardias. In a consecutive series of 8 patients with 9 focal atrial tachycardias, the use of the single catheter CARTO mapping system was associated with ablation success in all but one patient who had a left atrial tachycardia localized to the medial aspect of the orifice of the left atrial appendage. Only low power energy delivery was used in this patient because of the

  8. Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus.

    PubMed

    Sonnante, Gabriella; Gatto, Angela; Morgese, Anita; Montemurro, Francesco; Sarli, Giulio; Blanco, Emanuela; Pignone, Domenico

    2011-11-01

    An integrated consensus linkage map is proposed for globe artichoke. Maternal and paternal genetic maps were constructed on the basis of an F(1) progeny derived from crossing an artichoke genotype (Mola) with its progenitor, the wild cardoon (Tolfa), using EST-derived SSRs, genomic SSRs, AFLPs, ten genes, and two morphological traits. For most genes, mainly belonging to the chlorogenic acid pathway, new markers were developed. Five of these were SNP markers analyzed through high-resolution melt technology. From the maternal (Mola) and paternal (Tolfa) maps, an integrated map was obtained, containing 337 molecular and one morphological markers ordered in 17 linkage groups (LGs), linked between Mola and Tolfa. The integrated map covers 1,488.8 cM, with an average distance of 4.4 cM between markers. The map was aligned with already existing maps for artichoke, and 12 LGs were linked via 31 bridge markers. LG numbering has been proposed. A total of 124 EST-SSRs and two genes were mapped here for the first time, providing a framework for the construction of a functional map in artichoke. The establishment of a consensus map represents a necessary condition to plan a complete sequencing of the globe artichoke genome.

  9. Reconnaissance mapping from aerial photographs

    NASA Technical Reports Server (NTRS)

    Weeden, H. A.; Bolling, N. B. (Principal Investigator)

    1975-01-01

    The author has identified the following significant results. Engineering soil and geology maps were successfully made from Pennsylvania aerial photographs taken at scales from 1:4,800 to 1:60,000. The procedure involved a detailed study of a stereoscopic model while evaluating landform, drainage, erosion, color or gray tones, tone and texture patterns, vegetation, and cultural or land use patterns.

  10. Smartphones Based Mobile Mapping Systems

    NASA Astrophysics Data System (ADS)

    Al-Hamad, A.; El-Sheimy, N.

    2014-06-01

    The past 20 years have witnessed an explosive growth in the demand for geo-spatial data. This demand has numerous sources and takes many forms; however, the net effect is an ever-increasing thirst for data that is more accurate, has higher density, is produced more rapidly, and is acquired less expensively. For mapping and Geographic Information Systems (GIS) projects, this has been achieved through the major development of Mobile Mapping Systems (MMS). MMS integrate various navigation and remote sensing technologies which allow mapping from moving platforms (e.g. cars, airplanes, boats, etc.) to obtain the 3D coordinates of the points of interest. Such systems obtain accuracies that are suitable for all but the most demanding mapping and engineering applications. However, this accuracy doesn't come cheaply. As a consequence of the platform and navigation and mapping technologies used, even an "inexpensive" system costs well over 200 000 USD. Today's mobile phones are getting ever more sophisticated. Phone makers are determined to reduce the gap between computers and mobile phones. Smartphones, in addition to becoming status symbols, are increasingly being equipped with extended Global Positioning System (GPS) capabilities, Micro Electro Mechanical System (MEMS) inertial sensors, extremely powerful computing power and very high resolution cameras. Using all of these components, smartphones have the potential to replace the traditional land MMS and portable GPS/GIS equipment. This paper introduces an innovative application of smartphones as a very low cost portable MMS for mapping and GIS applications.

  11. Video-based Mobile Mapping System Using Smartphones

    NASA Astrophysics Data System (ADS)

    Al-Hamad, A.; Moussa, A.; El-Sheimy, N.

    2014-11-01

    The last two decades have witnessed a huge growth in the demand for geo-spatial data. This demand has encouraged researchers around the world to develop new algorithms and design new mapping systems in order to obtain reliable sources for geo-spatial data. Mobile Mapping Systems (MMS) are one of the main sources for mapping and Geographic Information Systems (GIS) data. MMS integrate various remote sensing sensors, such as cameras and LiDAR, along with navigation sensors to provide the 3D coordinates of points of interest from moving platform (e.g. cars, air planes, etc.). Although MMS can provide accurate mapping solution for different GIS applications, the cost of these systems is not affordable for many users and only large scale companies and institutions can benefits from MMS systems. The main objective of this paper is to propose a new low cost MMS with reasonable accuracy using the available sensors in smartphones and its video camera. Using the smartphone video camera, instead of capturing individual images, makes the system easier to be used by non-professional users since the system will automatically extract the highly overlapping frames out of the video without the user intervention. Results of the proposed system are presented which demonstrate the effect of the number of the used images in mapping solution. In addition, the accuracy of the mapping results obtained from capturing a video is compared to the same results obtained from using separate captured images instead of video.

  12. Tone mapping infrared images using conditional filtering-based multi-scale retinex

    NASA Astrophysics Data System (ADS)

    Luo, Haibo; Xu, Lingyun; Hui, Bin; Chang, Zheng

    2015-10-01

    Tone mapping can be used to compress the dynamic range of the image data such that it can be fitted within the range of the reproduction media and human vision. The original infrared images that captured with infrared focal plane arrays (IFPA) are high dynamic images, so tone mapping infrared images is an important component in the infrared imaging systems, and it has become an active topic in recent years. In this paper, we present a tone mapping framework using multi-scale retinex. Firstly, a Conditional Gaussian Filter (CGF) was designed to suppress "halo" effect. Secondly, original infrared image is decomposed into a set of images that represent the mean of the image at different spatial resolutions by applying CGF of different scale. And then, a set of images that represent the multi-scale details of original image is produced by dividing the original image pointwise by the decomposed image. Thirdly, the final detail image is reconstructed by weighted sum of the multi-scale detail images together. Finally, histogram scaling and clipping is adopted to remove outliers and scale the detail image, 0.1% of the pixels are clipped at both extremities of the histogram. Experimental results show that the proposed algorithm efficiently increases the local contrast while preventing "halo" effect and provides a good rendition of visual effect.

  13. Geologic Map of the Stafford Quadrangle, Stafford County, Virginia

    USGS Publications Warehouse

    Mixon, Robert B.; Pavlides, Louis; Horton, J. Wright; Powars, David S.; Schindler, J. Stephen

    2005-01-01

    Introduction The Stafford 7.5-minute quadrangle, comprising approximately 55 square miles (142.5 square kilometers) of northeastern Virginia, is about 40 miles (mi) south of Washington, D.C. The region's main north-south transportation corridor, which connects Washington, D.C., and Richmond, Va., consists of Interstate 95, U.S. Highway 1, and the heavily used CSX and Amtrak railroads. Although the northern and eastern parts of the Stafford quadrangle have undergone extensive suburban development, the remainder of the area is still dominantly rural in character. The town of Stafford is the county seat. The Stafford 7.5-minute quadrangle is located in the Fredericksburg 30'x60' quadrangle, where information on the regional stratigraphy and structure is available from Mixon and others' (2000) geologic map and multichapter explanatory text. In addition to straddling the 'Fall Zone' boundary between the Appalachian Piedmont and the Atlantic Coastal Plain provinces, this quadrangle contains the best preserved and best studied segment of the Stafford fault system, an important example of late Cenozoic faulting in eastern North America (Mixon and Newell, 1977). This 1:24,000-scale geologic map provides a detailed framework for interpreting and integrating topical studies of that fault system. Our geologic map integrates more than two decades of intermittent geologic mapping and related investigations by the authors in this part of the Virginia Coastal Plain. Earlier mapping in the Piedmont by Pavlides (1995) has been revised by additional detailed mapping in selected areas, particularly near Abel Lake and Smith Lake, and by field evaluation of selected contact relations.

  14. Canopy Density Mapping on Ultracam-D Aerial Imagery in Zagros Woodlands, Iran

    NASA Astrophysics Data System (ADS)

    Erfanifard, Y.; Khodaee, Z.

    2013-09-01

    Canopy density maps express different characteristics of forest stands, especially in woodlands. Obtaining such maps by field measurements is so expensive and time-consuming. It seems necessary to find suitable techniques to produce these maps to be used in sustainable management of woodland ecosystems. In this research, a robust procedure was suggested to obtain these maps by very high spatial resolution aerial imagery. It was aimed to produce canopy density maps by UltraCam-D aerial imagery, newly taken in Zagros woodlands by Iran National Geographic Organization (NGO), in this study. A 30 ha plot of Persian oak (Quercus persica) coppice trees was selected in Zagros woodlands, Iran. The very high spatial resolution aerial imagery of the plot purchased from NGO, was classified by kNN technique and the tree crowns were extracted precisely. The canopy density was determined in each cell of different meshes with different sizes overlaid on the study area map. The accuracy of the final maps was investigated by the ground truth obtained by complete field measurements. The results showed that the proposed method of obtaining canopy density maps was efficient enough in the study area. The final canopy density map obtained by a mesh with 30 Ar (3000 m2) cell size had 80% overall accuracy and 0.61 KHAT coefficient of agreement which shows a great agreement with the observed samples. This method can also be tested in other case studies to reveal its capability in canopy density map production in woodlands.

  15. Influences on physicians' adoption of electronic detailing (e-detailing).

    PubMed

    Alkhateeb, Fadi M; Doucette, William R

    2009-01-01

    E-detailing means using digital technology: internet, video conferencing and interactive voice response. There are two types of e-detailing: interactive (virtual) and video. Currently, little is known about what factors influence physicians' adoption of e-detailing. The objectives of this study were to test a model of physicians' adoption of e-detailing and to describe physicians using e-detailing. A mail survey was sent to a random sample of 2000 physicians practicing in Iowa. Binomial logistic regression was used to test the model of influences on physician adoption of e-detailing. On the basis of Rogers' model of adoption, the independent variables included relative advantage, compatibility, complexity, peer influence, attitudes, years in practice, presence of restrictive access to traditional detailing, type of specialty, academic affiliation, type of practice setting and control variables. A total of 671 responses were received giving a response rate of 34.7%. A total of 141 physicians (21.0%) reported using of e-detailing. The overall adoption model for using either type of e-detailing was found to be significant. Relative advantage, peer influence, attitudes, type of specialty, presence of restrictive access and years of practice had significant influences on physician adoption of e-detailing. The model of adoption of innovation is useful to explain physicians' adoption of e-detailing.

  16. Evaluating the new soil erosion map of Hungary

    NASA Astrophysics Data System (ADS)

    Waltner, István; Centeri, Csaba; Takács, Katalin; Pirkó, Béla; Koós, Sándor; László, Péter; Pásztor, László

    2017-04-01

    With growing concerns on the effects of climate change and land use practices on our soil resources, soil erosion by water is becoming a significant issue internationally. Since the 1964 publication of the first soil erosion map of Hungary, there have been several attempts to provide a countrywide assessment of erosion susceptibility. However, there has been no up-to-date map produced in the last decade. In 2016, a new, 1:100 000 scale soil erosion map was published, based on available soil, elevation, land use and meteorological data for the extremely wet year of 2010. The map utilized combined outputs for two spatially explicit methods: the widely used empirical Universal Soil Loss Equation (USLE) and the process-based Pan-European Soil Erosion Risk Assessment (PESERA) models. The present study aims to provide a detailed analysis of the model results. In lieu of available national monitoring data, information from other sources were used. The Soil Degradation Subsystem (TDR) of the National Environmental Information System (OKIR) is a digital database based on a soil survey and farm dairy data collected from representative farms in Hungary. During the survey all kind of degradation forms - including soil erosion - were considered. Agricultural and demographic data was obtained from the Hungarian Central Statistical Office (KSH). Data from an interview-based survey was also used in an attempt to assess public awareness of soil erosion risks. Point-based evaluation of the model results was complemented with cross-regional assessment of soil erosion estimates. This, combined with available demographic information provides us with an opportunity to address soil erosion on a community level, with the identification of regions with the highest risk of being affected by soil erosion.

  17. STS-59 MAPS experiment view

    NASA Technical Reports Server (NTRS)

    1994-01-01

    STS-59's MAPS (Measurement of Air Pollution from Satellites) experiment is sending real-time data that provides the most comprehensive view of carbon monoxide concentrations on Earth ever recorded. This computer image shows a summary of 'quick look' data obtained by the MAPS instrument during its first days of operations as part of the Space Shuttle Endeavour's SRL-1 payload.

  18. Chord Splicing & Joining Detail; Chord & CrossBracing Joint Details; ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Chord Splicing & Joining Detail; Chord & Cross-Bracing Joint Details; Cross Bracing Center Joint Detail; Chord & Diagonal Joint Detail - Vermont Covered Bridge, Highland Park, spanning Kokomo Creek at West end of Deffenbaugh Street (moved to), Kokomo, Howard County, IN

  19. StructMap: Elastic Distance Analysis of Electron Microscopy Maps for Studying Conformational Changes.

    PubMed

    Sanchez Sorzano, Carlos Oscar; Alvarez-Cabrera, Ana Lucia; Kazemi, Mohsen; Carazo, Jose María; Jonić, Slavica

    2016-04-26

    Single-particle electron microscopy (EM) has been shown to be very powerful for studying structures and associated conformational changes of macromolecular complexes. In the context of analyzing conformational changes of complexes, distinct EM density maps obtained by image analysis and three-dimensional (3D) reconstruction are usually analyzed in 3D for interpretation of structural differences. However, graphic visualization of these differences based on a quantitative analysis of elastic transformations (deformations) among density maps has not been done yet due to a lack of appropriate methods. Here, we present an approach that allows such visualization. This approach is based on statistical analysis of distances among elastically aligned pairs of EM maps (one map is deformed to fit the other map), and results in visualizing EM maps as points in a lower-dimensional distance space. The distances among points in the new space can be analyzed in terms of clusters or trajectories of points related to potential conformational changes. The results of the method are shown with synthetic and experimental EM maps at different resolutions. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

  20. Lightning Mapping With an Array of Fast Antennas

    NASA Astrophysics Data System (ADS)

    Wu, Ting; Wang, Daohong; Takagi, Nobuyuki

    2018-04-01

    Fast Antenna Lightning Mapping Array (FALMA), a low-frequency lightning mapping system comprising an array of fast antennas, was developed and established in Gifu, Japan, during the summer of 2017. Location results of two hybrid flashes and a cloud-to-ground flash comprising 11 return strokes (RSs) are described in detail in this paper. Results show that concurrent branches of stepped leaders can be readily resolved, and K changes and dart leaders with speeds up to 2.4 × 107 m/s are also well imaged. These results demonstrate that FALMA can reconstruct three-dimensional structures of lightning flashes with great details. Location accuracy of FALMA is estimated by comparing the located striking points of successive RSs in cloud-to-ground flashes. Results show that distances between successive RSs are mainly below 25 m, indicating exceptionally high location accuracy of FALMA.

  1. A study on aircraft map display location and orientation. [effects of map display location on manual piloting performance

    NASA Technical Reports Server (NTRS)

    Baty, D. L.; Wempe, T. E.; Huff, E. M.

    1973-01-01

    Six airline pilots participated in a fixed-base simulator study to determine the effects of two Horizontal Situation Display (HSD/map) panel locations relative to the Vertical Situation Display (VSD), and of three map orientations on manual piloting performance. Pilot comments and opinions were formally obtained. Significant performance differences were found between wind conditions, and among pilots, but not between map locations and orientations. The results also illustrate the potential tracking accuracy of such a display. Recommendations concerning display location and map orientation are made.

  2. HELP: XID+, the probabilistic de-blender for Herschel SPIRE maps

    NASA Astrophysics Data System (ADS)

    Hurley, P. D.; Oliver, S.; Betancourt, M.; Clarke, C.; Cowley, W. I.; Duivenvoorden, S.; Farrah, D.; Griffin, M.; Lacey, C.; Le Floc'h, E.; Papadopoulos, A.; Sargent, M.; Scudder, J. M.; Vaccari, M.; Valtchanov, I.; Wang, L.

    2017-01-01

    We have developed a new prior-based source extraction tool, XID+, to carry out photometry in the Herschel SPIRE (Spectral and Photometric Imaging Receiver) maps at the positions of known sources. XID+ is developed using a probabilistic Bayesian framework that provides a natural framework in which to include prior information, and uses the Bayesian inference tool Stan to obtain the full posterior probability distribution on flux estimates. In this paper, we discuss the details of XID+ and demonstrate the basic capabilities and performance by running it on simulated SPIRE maps resembling the COSMOS field, and comparing to the current prior-based source extraction tool DESPHOT. Not only we show that XID+ performs better on metrics such as flux accuracy and flux uncertainty accuracy, but we also illustrate how obtaining the posterior probability distribution can help overcome some of the issues inherent with maximum-likelihood-based source extraction routines. We run XID+ on the COSMOS SPIRE maps from Herschel Multi-Tiered Extragalactic Survey using a 24-μm catalogue as a positional prior, and a uniform flux prior ranging from 0.01 to 1000 mJy. We show the marginalized SPIRE colour-colour plot and marginalized contribution to the cosmic infrared background at the SPIRE wavelengths. XID+ is a core tool arising from the Herschel Extragalactic Legacy Project (HELP) and we discuss how additional work within HELP providing prior information on fluxes can and will be utilized. The software is available at https://github.com/H-E-L-P/XID_plus. We also provide the data product for COSMOS. We believe this is the first time that the full posterior probability of galaxy photometry has been provided as a data product.

  3. Mapping of magnetic chrons: paleomagnetic polarity map of East Iceland, 0-13 Myr

    NASA Astrophysics Data System (ADS)

    Helgason, Johann

    2016-04-01

    Through data on palaeomagnetism, stratigraphy and radiometric age dating an immense database on magnetic chrons has been established for the lava succession in Iceland (e.g. Kristjánsson, 2008). Correlation of magnetic chrons with the geomagnetic time scale provides a reasonable age estimate for vast stratigraphic sequences. The basalt lava succession in Iceland has a thickness of tens of kilometers. The magnetostratigraphic data offer, through the help of paleomagnetism and radiometric dating, a detailed timing of events in the evolution of the Iceland mantle plume region. Yet a magnetic polarity map for Iceland has been lacking but during the last 50 years, comprehensive stratigraphic mapping has paved the way for a magnetic polarity map in various parts of Iceland. Here, such a map is presented for a segment of East Iceland, i.e. for lavas ranging in age from 0 to 13 M yr. The map is a compilation based on various studies into the cliff section and stratigraphic work performed by numerous research initiatives, both in relation to hydroelectric research as well as academic projects. References: Kristjánsson, L., 2008. Paleomagnetic research on Icelandic lava flows. Jökull, 58, 101-116. Helgason, J., Duncan, R.A., Franzson, H., Guðmundsson, Á., and M. Riishuus., 2015. Magnetic polarity map of Akrafjall and Skarðsheiði and new 40Ar-39Ar age dating from West Iceland., Presentation at the spring conference of the Icelandic Geological Society, held on March 13th 2015 at the University of Iceland.

  4. Magnetometric mapping of superconducting RF cavities

    NASA Astrophysics Data System (ADS)

    Schmitz, B.; Köszegi, J.; Alomari, K.; Kugeler, O.; Knobloch, J.

    2018-05-01

    A scalable mapping system for superconducting RF (SRF) cavities is presented. Currently, it combines local temperature measurement with 3D magnetic field mapping along the outer surface of the resonator. This allows for the observation of dynamic effects that have an impact on the superconducting properties of a cavity, such as the normal to superconducting phase transition or a quench. The system was developed for a single cell 1.3 GHz TESLA-type cavity, but can be easily adopted to arbitrary other cavity types. A data acquisition rate of 500 Hz for all channels simultaneously (i.e., 2 ms acquisition time for a complete map) and a magnetic field resolution of currently up to 14 mA/m/μ0 = 17 nT have been implemented. While temperature mapping is a well known technique in SRF research, the integration of magnetic field mapping opens the possibility of detailed studies of trapped magnetic flux and its impact on the surface resistance. It is shown that magnetic field sensors based on the anisotropic magnetoresistance effect can be used in the cryogenic environment with improved sensitivity compared to room temperature. Furthermore, examples of first successful combined temperature and magnetic-field maps are presented.

  5. Satellite image based methods for fuels maps updating

    NASA Astrophysics Data System (ADS)

    Alonso-Benito, Alfonso; Hernandez-Leal, Pedro A.; Arbelo, Manuel; Gonzalez-Calvo, Alejandro; Moreno-Ruiz, Jose A.; Garcia-Lazaro, Jose R.

    2016-10-01

    Regular updating of fuels maps is important for forest fire management. Nevertheless complex and time consuming field work is usually necessary for this purpose, which prevents a more frequent update. That is why the assessment of the usefulness of satellite data and the development of remote sensing techniques that enable the automatic updating of these maps, is of vital interest. In this work, we have tested the use of the spectral bands of OLI (Operational Land Imager) sensor on board Landsat 8 satellite, for updating the fuels map of El Hierro Island (Spain). From previously digitized map, a set of 200 reference plots for different fuel types was created. A 50% of the plots were randomly used as a training set and the rest were considered for validation. Six supervised and 2 unsupervised classification methods were applied, considering two levels of detail. A first level with only 5 classes (Meadow, Brushwood, Undergrowth canopy cover >50%, Undergrowth canopy cover <15%, and Xeric formations), and the second one containing 19 fuel types. The level 1 classification methods yielded an overall accuracy ranging from 44% for Parellelepided to an 84% for Maximun Likelihood. Meanwhile, level 2 results showed at best, an unacceptable overall accuracy of 34%, which prevents the use of this data for such a detailed characterization. Anyway it has been demonstrated that in some conditions, images of medium spatial resolution, like Landsat 8-OLI, could be a valid tool for an automatic upgrade of fuels maps, minimizing costs and complementing traditional methodologies.

  6. Having trouble with your strategy? Then map it.

    PubMed

    Kaplan, R S; Norton, D P

    2000-01-01

    If you were a military general on the march, you'd want your troops to have plenty of maps--detailed information about the mission they were on, the roads they would travel, the campaigns they would undertake, and the weapons at their disposal. The same holds true in business: a workforce needs clear and detailed information to execute a business strategy successfully. Until now, there haven't been many tools that can communicate both an organization's strategy and the processes and systems needed to implement that strategy. But authors Robert Kaplan and David Norton, cocreators of the balanced scorecard, have adapted that seminal tool to create strategy maps. Strategy maps let an organization describe and illustrate--in clear and general language--its objectives, initiatives, targets markets, performance measures, and the links between all the pieces of its strategy. Employees get a visual representation of how their jobs are tied to the company's overall goals, while managers get a clearer understanding of their strategies and a means to detect and correct any flaws in those plans. Using Mobil North American Marketing and Refining Company as an example, Kaplan and Norton walk through the creation of a strategy map and its four distinct regions--financial, customer, internal process, and learning and growth--which correspond to the four perspectives of the balanced scorecard. The authors show step by step how the Mobil division used the map to transform itself from a centrally controlled manufacturer of commodity products to a decentralized, customer-driven organization.

  7. Titan Polar Maps - 2015

    NASA Image and Video Library

    2015-10-09

    The northern and southern hemispheres of Titan are seen in these polar stereographic maps, assembled in 2015 using the best-available images of the giant Saturnian moon from NASA's Cassini mission. The images were taken by Cassini's imaging cameras using a spectral filter centered at 938 nanometers, allowing researchers to examine variations in albedo (or inherent brightness) across the surface of Titan. These maps utilize imaging data collected through Cassini's flyby on April 7, 2014, known as "T100." Titan's north pole was not well illuminated early in Cassini's mission, because it was winter in the northern hemisphere when the spacecraft arrived at Saturn. Cassini has been better able to observe northern latitudes in more recent years due to seasonal changes in solar illumination. Compared to the previous version of Cassini's north polar map (see PIA11146), this map provides much more detail and fills in a large area of missing data. The imaging data in these maps complement Cassini synthetic aperture radar (SAR) mapping of Titan's north pole (see PIA17655). The uniform gray area in the northern hemisphere indicates a gap in the imaging coverage of Titan's surface, to date. The missing data will be imaged by Cassini during flybys on December 15, 2016 and March 5, 2017. Lakes are also seen in the southern hemisphere map, but they are much less common than in the north polar region. Only a lakes have been confirmed in the south. The dark, footprint-shaped feature at 180 degrees west is Ontario Lacus; a smaller lake named Crveno Lacus can be seen as a very dark spot just above Ontario. The dark-albedo area seen at the top of the southern hemisphere map (at 0 degrees west) is an area called Mezzoramia. Each map is centered on one of the poles, and surface coverage extends southward to 60 degrees latitude. Grid lines indicate latitude in 10-degree increments and longitude in 30-degree increments. The scale in the full-size versions of these maps is 4,600 feet (1

  8. Statistical Significance of Optical Map Alignments

    PubMed Central

    Sarkar, Deepayan; Goldstein, Steve; Schwartz, David C.

    2012-01-01

    Abstract The Optical Mapping System constructs ordered restriction maps spanning entire genomes through the assembly and analysis of large datasets comprising individually analyzed genomic DNA molecules. Such restriction maps uniquely reveal mammalian genome structure and variation, but also raise computational and statistical questions beyond those that have been solved in the analysis of smaller, microbial genomes. We address the problem of how to filter maps that align poorly to a reference genome. We obtain map-specific thresholds that control errors and improve iterative assembly. We also show how an optimal self-alignment score provides an accurate approximation to the probability of alignment, which is useful in applications seeking to identify structural genomic abnormalities. PMID:22506568

  9. Reconnaissance geologic map of Kodiak Island and adjacent islands, Alaska

    USGS Publications Warehouse

    Wilson, Frederic H.

    2013-01-01

    Kodiak Island and its adjacent islands, located on the west side of the Gulf of Alaska, contain one of the largest areas of exposure of the flysch and melange of the Chugach terrane of southern Alaska. However, in the past 25 years, only detailed mapping covering small areas in the archipelago has been done. This map and its associated digital files (Wilson and others, 2005) present the best available mapping compiled in an integrated fashion. The map and associated digital files represent part of a systematic effort to release geologic map data for the United States in a uniform manner. The geologic data have been compiled from a wide variety of sources, ranging from state and regional geologic maps to large-scale field mapping. The map data are presented for use at a nominal scale of 1:500,000, although individual datasets (see Wilson and others, 2005) may contain data suitable for use at larger scales.

  10. Understanding semantic mapping evolution by observing changes in biomedical ontologies.

    PubMed

    dos Reis, Julio Cesar; Pruski, Cédric; Da Silveira, Marcos; Reynaud-Delaître, Chantal

    2014-02-01

    Knowledge Organization Systems (KOSs) are extensively used in the biomedical domain to support information sharing between software applications. KOSs are proposed covering different, but overlapping subjects, and mappings indicate the semantic relation between concepts from two KOSs. Over time, KOSs change as do the mappings between them. This can result from a new discovery or a revision of existing knowledge which includes corrections of concepts or mappings. Indeed, changes affecting KOS entities may force the underline mappings to be updated in order to ensure their reliability over time. To tackle this open research problem, we study how mappings are affected by KOS evolution. This article presents a detailed descriptive analysis of the impact that changes in KOS have on mappings. As a case study, we use the official mappings established between SNOMED CT and ICD-9-CM from 2009 to 2011. Results highlight factors according to which KOS changes in varying degrees influence the evolution of mappings. Copyright © 2013 Elsevier Inc. All rights reserved.

  11. Map design and production issues for the Utah Gap Analysis Project

    USGS Publications Warehouse

    Hutchinson, John A.; Wittmann, J.H.

    1997-01-01

    The cartographic preparation and printing of four maps for the Utah GAP Project presented a wide range of challenges in cartographic design and production. In meeting these challenges, the map designers had to balance the purpose of the maps together with their legibility and utility against both the researchers' desire to show as much detail as possible and the technical limitations inherent in the printing process. This article describes seven design and production issues in order to illustrate the challenges of making maps from a merger of satellite data and GIS databases, and to point toward future investigation and development.

  12. GLASS: detailed structure of high redshift galaxies from HST grism spectroscopy

    NASA Astrophysics Data System (ADS)

    Jones, Tucker; Treu, Tommaso; Schmidt, Kasper B.; Wang, Xin; Brammer, Gabriel; Glass

    2015-01-01

    The Grism Lens-Amplified Survey from Space (GLASS) is obtaining slitless near-IR spectroscopy of 10 galaxy clusters selected for their strong lensing properties, including all six Hubble Frontier Fields. The GLASS survey will have gathered more than ten thousand spectra upon completion in early 2015. Slitless grism spectra are ideal for mapping emission lines such as [O II], [O III], and Hα at z=1-3 as well as Lyα at z>6. The combination of strong gravitational lensing and HST's diffraction limit provides excellent sensitivity (~1e-18 erg/s/cm2 RMS) with spatial resolution as fine as 100 pc for highly magnified sources, and ~500 pc for less magnified sources near the edge of the field of view. This enables precise measurements of metallicity gradients, the distribution of star formation, and other details of the physical structure of high redshift galaxies with masses as low as ~107 M⊙ at z=2. I will discuss measurements of these physical properties and implications for galaxy evolution based on the largest sample available to date with such high resolution at z>1.

  13. Interpreting ground conditions from geologic maps

    USGS Publications Warehouse

    ,

    1949-01-01

    Intelligent planning for heavy construction, water supply, or other land utilization requires advance knowledge of ground conditions in the area. It is essential to know:the topography, that is, the configuration of the land surface;the geology and soils, that is, the deposits that compose the land and its weathered surface; andthe hydrology, that is, the occurrence of water whether under or on the ground.These elements usually are considered in planning land developments that involve much investment; detailed surveys generally are made of the topography, geology, soils, and hydrology at the site selected for development. Such detailed surveys are essential, but equally essential and often overlooked is the need for general surveys prior to site selection.Only if the general surveys have been made is it possible to know that a particular site is most suitable for the purpose and that no situations in the tributary areas that might affect the project have been overlooked. Moreover, the general regional relations must be known in order to properly interpret the geology, soils, and hydrology at a particular locality. In brief, both the general and the specific are needed in order to avoid costly mistakes either during or after development.The accompanying maps illustrate how a general geologic map can be used for interpreting grc .d conditions during a planning stage prior to site selection. The topographic and geologic maps, which provide the basic data, have been simplified from some existing ones. The interpretive sheets are intended to provide some examples of the kinds of information that trained persons can read from such basic maps.

  14. Transcription Factor Map Alignment of Promoter Regions

    PubMed Central

    Blanco, Enrique; Messeguer, Xavier; Smith, Temple F; Guigó, Roderic

    2006-01-01

    We address the problem of comparing and characterizing the promoter regions of genes with similar expression patterns. This remains a challenging problem in sequence analysis, because often the promoter regions of co-expressed genes do not show discernible sequence conservation. In our approach, thus, we have not directly compared the nucleotide sequence of promoters. Instead, we have obtained predictions of transcription factor binding sites, annotated the predicted sites with the labels of the corresponding binding factors, and aligned the resulting sequences of labels—to which we refer here as transcription factor maps (TF-maps). To obtain the global pairwise alignment of two TF-maps, we have adapted an algorithm initially developed to align restriction enzyme maps. We have optimized the parameters of the algorithm in a small, but well-curated, collection of human–mouse orthologous gene pairs. Results in this dataset, as well as in an independent much larger dataset from the CISRED database, indicate that TF-map alignments are able to uncover conserved regulatory elements, which cannot be detected by the typical sequence alignments. PMID:16733547

  15. Damage Proxy Map from Interferometric Synthetic Aperture Radar Coherence

    NASA Technical Reports Server (NTRS)

    Webb, Frank H. (Inventor); Yun, Sang-Ho (Inventor); Fielding, Eric Jameson (Inventor); Simons, Mark (Inventor)

    2015-01-01

    A method, apparatus, and article of manufacture provide the ability to generate a damage proxy map. A master coherence map and a slave coherence map, for an area prior and subsequent to (including) a damage event are obtained. The slave coherence map is registered to the master coherence map. Pixel values of the slave coherence map are modified using histogram matching to provide a first histogram of the master coherence map that exactly matches a second histogram of the slave coherence map. A coherence difference between the slave coherence map and the master coherence map is computed to produce a damage proxy map. The damage proxy map is displayed with the coherence difference displayed in a visually distinguishable manner.

  16. Progress in the Scandia Region Geologic Map of Mars

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Rodriguez, J. A. P.

    2010-01-01

    We are in the second year of a four year project to produce a geologic map of the Scandia region of Mars at 1:3,000,000 scale for publication in the USGS Scientific Investigations Map series. The primary objective of the map is to analyze and reconstruct the resurfacing history of this region in much greater detail than achieved by the previous northern plainswide mapping effort. This region includes (1) a broad swath of the Vastitas Borealis plains that includes various Scandia landforms and the Phoenix lander site; (2) part of the margin of the north polar plateau, Planum Boreum; and (3) the northern margin of the immense Alba Mons volcanic shield. We rely mostly on Mars Orbiter Laser Altimeter (MOLA) digital elevation models, Thermal Emission Imaging Spectrometer infrared and visual range, and Context Camera images for mapping and topographic analysis.

  17. Geologic maps of the eastern Alaska Range, Alaska (1:63,360 scale)

    USGS Publications Warehouse

    Nokleberg, Warren J.; Aleinikoff, John N.; Bond, Gerard C.; Ferrians, Oscar J.; Herzon, Paige L.; Lange, Ian M.; Miyaoka, Ronny T.; Richter, Donald H.; Schwab, Carl E.; Silva, Steven R.; Smith, Thomas E.; Zehner, Richard E.

    2015-01-01

    This report provides a description of map units for a suite of 44 inch-to-mile (1:63,360-scale) geologic quadrangle maps of the eastern Alaska Range. This report also contains a geologic and tectonic summary and a comprehensive list of references pertaining to geologic mapping and specialized studies of the region. In addition to the geologic maps of the eastern Alaska Range, this package includes a list of map units and an explanation of map symbols and abbreviations. The geologic maps display detailed surficial and bedrock geology, structural and stratigraphic data, portrayal of the active Denali fault that bisects the core of the east–west-trending range, and portrayal of other young faults along the north and south flanks of the range.

  18. Compiling Mercury relief map using several data sources

    NASA Astrophysics Data System (ADS)

    Zakharova, M.

    2015-12-01

    There are several data of Mercury topography obtained as the result of processing materials collected by two spacecraft - the Mariner-10 and the MESSENGER during their Mercury flybys.The history of the visual mapping of Mercury begins at the recent times as the first significant observations were made during the latter half of the 20th century, whereas today we have no data with 100% coverage of the entire surface of the Mercury except the global mosaic composed of the images acquired by MESSENGER. The main objective of this work is to provide the first Mercury relief map using all the existing elevation data. The workflow included collecting, combining and processing the existing data and afterwards merging them correctly for one single map compiling. The preference was given to topography data while the global mosaic was used to fill the gaps where there was insufficient topography.The Mercury relief map has been created with the help of four different types of data: - global mosaic with 100% coverage of Mercury's surface created from Messenger orbital images (36% of the final map);- Digital Terrain Models obtained by the treating stereo images made during the Mariner 10's flybys (15% of the map) (Cook and Robinson, 2000);- Digital Terrain Models obtained from images acquired during the Messenger flybys (24% of the map) (F. Preusker et al., 2011);- the data sets produced by the MESSENGER Mercury Laser Altimeter (MLA) (25 % of the map).The final map is created in the Lambert azimuthal Equal area projection and has the scale 1:18 000 000. It represents two hemispheres - western and eastern which are separated by the zero meridian. It mainly shows the hypsometric features of the planet and craters with a diameter more than 200 kilometers.

  19. Improvements on mapping soil liquefaction at a regional scale

    NASA Astrophysics Data System (ADS)

    Zhu, Jing

    Earthquake induced soil liquefaction is an important secondary hazard during earthquakes and can lead to significant damage to infrastructure. Mapping liquefaction hazard is important in both planning for earthquake events and guiding relief efforts by positioning resources once the events have occurred. This dissertation addresses two aspects of liquefaction hazard mapping at a regional scale including 1) predictive liquefaction hazard mapping and 2) post-liquefaction cataloging. First, current predictive hazard liquefaction mapping relies on detailed geologic maps and geotechnical data, which are not always available in at-risk regions. This dissertation improves the predictive liquefaction hazard mapping by the development and validation of geospatial liquefaction models (Chapter 2 and 3) that predict liquefaction extent and are appropriate for global application. The geospatial liquefaction models are developed using logistic regression from a liquefaction database consisting of the data from 27 earthquake events from six countries. The model that performs best over the entire dataset includes peak ground velocity (PGV), VS30, distance to river, distance to coast, and precipitation. The model that performs best over the noncoastal dataset includes PGV, VS30, water table depth, distance to water body, and precipitation. Second, post-earthquake liquefaction cataloging historically relies on field investigation that is often limited by time and expense, and therefore results in limited and incomplete liquefaction inventories. This dissertation improves the post-earthquake cataloging by the development and validation of a remote sensing-based method that can be quickly applied over a broad region after an earthquake and provide a detailed map of liquefaction surface effects (Chapter 4). Our method uses the optical satellite images before and after an earthquake event from the WorldView-2 satellite with 2 m spatial resolution and eight spectral bands. Our method

  20. The mouse-human anatomy ontology mapping project.

    PubMed

    Hayamizu, Terry F; de Coronado, Sherri; Fragoso, Gilberto; Sioutos, Nicholas; Kadin, James A; Ringwald, Martin

    2012-01-01

    The overall objective of the Mouse-Human Anatomy Project (MHAP) was to facilitate the mapping and harmonization of anatomical terms used for mouse and human models by Mouse Genome Informatics (MGI) and the National Cancer Institute (NCI). The anatomy resources designated for this study were the Adult Mouse Anatomy (MA) ontology and the set of anatomy concepts contained in the NCI Thesaurus (NCIt). Several methods and software tools were identified and evaluated, then used to conduct an in-depth comparative analysis of the anatomy ontologies. Matches between mouse and human anatomy terms were determined and validated, resulting in a highly curated set of mappings between the two ontologies that has been used by other resources. These mappings will enable linking of data from mouse and human. As the anatomy ontologies have been expanded and refined, the mappings have been updated accordingly. Insights are presented into the overall process of comparing and mapping between ontologies, which may prove useful for further comparative analyses and ontology mapping efforts, especially those involving anatomy ontologies. Finally, issues concerning further development of the ontologies, updates to the mapping files, and possible additional applications and significance were considered. DATABASE URL: http://obofoundry.org/cgi-bin/detail.cgi?id=ma2ncit.

  1. An image-space parallel convolution filtering algorithm based on shadow map

    NASA Astrophysics Data System (ADS)

    Li, Hua; Yang, Huamin; Zhao, Jianping

    2017-07-01

    Shadow mapping is commonly used in real-time rendering. In this paper, we presented an accurate and efficient method of soft shadows generation from planar area lights. First this method generated a depth map from light's view, and analyzed the depth-discontinuities areas as well as shadow boundaries. Then these areas were described as binary values in the texture map called binary light-visibility map, and a parallel convolution filtering algorithm based on GPU was enforced to smooth out the boundaries with a box filter. Experiments show that our algorithm is an effective shadow map based method that produces perceptually accurate soft shadows in real time with more details of shadow boundaries compared with the previous works.

  2. Preliminary Geologic Map of the Topanga 7.5' Quadrangle, Southern California: A Digital Database

    USGS Publications Warehouse

    Yerkes, R.F.; Campbell, R.H.

    1995-01-01

    INTRODUCTION This Open-File report is a digital geologic map database. This pamphlet serves to introduce and describe the digital data. There is no paper map included in the Open-File report. This digital map database is compiled from previously published sources combined with some new mapping and modifications in nomenclature. The geologic map database delineates map units that are identified by general age and lithology following the stratigraphic nomenclature of the U. S. Geological Survey. For detailed descriptions of the units, their stratigraphic relations and sources of geologic mapping consult Yerkes and Campbell (1994). More specific information about the units may be available in the original sources. The content and character of the database and methods of obtaining it are described herein. The geologic map database itself, consisting of three ARC coverages and one base layer, can be obtained over the Internet or by magnetic tape copy as described below. The processes of extracting the geologic map database from the tar file, and importing the ARC export coverages (procedure described herein), will result in the creation of an ARC workspace (directory) called 'topnga.' The database was compiled using ARC/INFO version 7.0.3, a commercial Geographic Information System (Environmental Systems Research Institute, Redlands, California), with version 3.0 of the menu interface ALACARTE (Fitzgibbon and Wentworth, 1991, Fitzgibbon, 1991, Wentworth and Fitzgibbon, 1991). It is stored in uncompressed ARC export format (ARC/INFO version 7.x) in a compressed UNIX tar (tape archive) file. The tar file was compressed with gzip, and may be uncompressed with gzip, which is available free of charge via the Internet from the gzip Home Page (http://w3.teaser.fr/~jlgailly/gzip). A tar utility is required to extract the database from the tar file. This utility is included in most UNIX systems, and can be obtained free of charge via the Internet from Internet Literacy's Common

  3. cudaMap: a GPU accelerated program for gene expression connectivity mapping

    PubMed Central

    2013-01-01

    Background Modern cancer research often involves large datasets and the use of sophisticated statistical techniques. Together these add a heavy computational load to the analysis, which is often coupled with issues surrounding data accessibility. Connectivity mapping is an advanced bioinformatic and computational technique dedicated to therapeutics discovery and drug re-purposing around differential gene expression analysis. On a normal desktop PC, it is common for the connectivity mapping task with a single gene signature to take > 2h to complete using sscMap, a popular Java application that runs on standard CPUs (Central Processing Units). Here, we describe new software, cudaMap, which has been implemented using CUDA C/C++ to harness the computational power of NVIDIA GPUs (Graphics Processing Units) to greatly reduce processing times for connectivity mapping. Results cudaMap can identify candidate therapeutics from the same signature in just over thirty seconds when using an NVIDIA Tesla C2050 GPU. Results from the analysis of multiple gene signatures, which would previously have taken several days, can now be obtained in as little as 10 minutes, greatly facilitating candidate therapeutics discovery with high throughput. We are able to demonstrate dramatic speed differentials between GPU assisted performance and CPU executions as the computational load increases for high accuracy evaluation of statistical significance. Conclusion Emerging ‘omics’ technologies are constantly increasing the volume of data and information to be processed in all areas of biomedical research. Embracing the multicore functionality of GPUs represents a major avenue of local accelerated computing. cudaMap will make a strong contribution in the discovery of candidate therapeutics by enabling speedy execution of heavy duty connectivity mapping tasks, which are increasingly required in modern cancer research. cudaMap is open source and can be freely downloaded from http://purl.oclc.org/NET/cudaMap

  4. cudaMap: a GPU accelerated program for gene expression connectivity mapping.

    PubMed

    McArt, Darragh G; Bankhead, Peter; Dunne, Philip D; Salto-Tellez, Manuel; Hamilton, Peter; Zhang, Shu-Dong

    2013-10-11

    Modern cancer research often involves large datasets and the use of sophisticated statistical techniques. Together these add a heavy computational load to the analysis, which is often coupled with issues surrounding data accessibility. Connectivity mapping is an advanced bioinformatic and computational technique dedicated to therapeutics discovery and drug re-purposing around differential gene expression analysis. On a normal desktop PC, it is common for the connectivity mapping task with a single gene signature to take > 2h to complete using sscMap, a popular Java application that runs on standard CPUs (Central Processing Units). Here, we describe new software, cudaMap, which has been implemented using CUDA C/C++ to harness the computational power of NVIDIA GPUs (Graphics Processing Units) to greatly reduce processing times for connectivity mapping. cudaMap can identify candidate therapeutics from the same signature in just over thirty seconds when using an NVIDIA Tesla C2050 GPU. Results from the analysis of multiple gene signatures, which would previously have taken several days, can now be obtained in as little as 10 minutes, greatly facilitating candidate therapeutics discovery with high throughput. We are able to demonstrate dramatic speed differentials between GPU assisted performance and CPU executions as the computational load increases for high accuracy evaluation of statistical significance. Emerging 'omics' technologies are constantly increasing the volume of data and information to be processed in all areas of biomedical research. Embracing the multicore functionality of GPUs represents a major avenue of local accelerated computing. cudaMap will make a strong contribution in the discovery of candidate therapeutics by enabling speedy execution of heavy duty connectivity mapping tasks, which are increasingly required in modern cancer research. cudaMap is open source and can be freely downloaded from http://purl.oclc.org/NET/cudaMap.

  5. Mapping X-Disease Phytoplasma Resistance in Prunus virginiana.

    PubMed

    Lenz, Ryan R; Dai, Wenhao

    2017-01-01

    Phytoplasmas such as " Candidatus Phytoplasma pruni," the causal agent of X-disease of stone fruits, lack detailed biological analysis. This has limited the understanding of plant resistance mechanisms. Chokecherry ( Prunus virginiana L.) is a promising model to be used for the plant-phytoplasma interaction due to its documented ability to resist X-disease infection. A consensus chokecherry genetic map "Cho" was developed with JoinMap 4.0 by joining two parental maps. The new map contains a complete set of 16 linkage groups, spanning a genetic distance of 2,172 cM with an average marker density of 3.97 cM. Three significant quantitative trait loci (QTL) associated with X-disease resistance were identified contributing to a total of 45.9% of the phenotypic variation. This updated genetic linkage map and the identified QTL will provide the framework needed to facilitate molecular genetics, genomics, breeding, and biotechnology research concerning X-disease in chokecherry and other Prunus species.

  6. Mapping X-Disease Phytoplasma Resistance in Prunus virginiana

    PubMed Central

    Lenz, Ryan R.; Dai, Wenhao

    2017-01-01

    Phytoplasmas such as “Candidatus Phytoplasma pruni,” the causal agent of X-disease of stone fruits, lack detailed biological analysis. This has limited the understanding of plant resistance mechanisms. Chokecherry (Prunus virginiana L.) is a promising model to be used for the plant-phytoplasma interaction due to its documented ability to resist X-disease infection. A consensus chokecherry genetic map “Cho” was developed with JoinMap 4.0 by joining two parental maps. The new map contains a complete set of 16 linkage groups, spanning a genetic distance of 2,172 cM with an average marker density of 3.97 cM. Three significant quantitative trait loci (QTL) associated with X-disease resistance were identified contributing to a total of 45.9% of the phenotypic variation. This updated genetic linkage map and the identified QTL will provide the framework needed to facilitate molecular genetics, genomics, breeding, and biotechnology research concerning X-disease in chokecherry and other Prunus species. PMID:29238359

  7. Creating Geologically Based Radon Potential Maps for Kentucky

    NASA Astrophysics Data System (ADS)

    Overfield, B.; Hahn, E.; Wiggins, A.; Andrews, W. M., Jr.

    2017-12-01

    Radon potential in the United States, Kentucky in particular, has historically been communicated using a single hazard level for each county; however, physical phenomena are not controlled by administrative boundaries, so single-value county maps do not reflect the significant variations in radon potential in each county. A more accurate approach uses bedrock geology as a predictive tool. A team of nurses, health educators, statisticians, and geologists partnered to create 120 county maps showing spatial variations in radon potential by intersecting residential radon test kit results (N = 60,000) with a statewide 1:24,000-scale bedrock geology coverage to determine statistically valid radon-potential estimates for each geologic unit. Maps using geology as a predictive tool for radon potential are inherently more detailed than single-value county maps. This mapping project revealed that areas in central and south-central Kentucky with the highest radon potential are underlain by shales and karstic limestones.

  8. A constraint optimization based virtual network mapping method

    NASA Astrophysics Data System (ADS)

    Li, Xiaoling; Guo, Changguo; Wang, Huaimin; Li, Zhendong; Yang, Zhiwen

    2013-03-01

    Virtual network mapping problem, maps different virtual networks onto the substrate network is an extremely challenging work. This paper proposes a constraint optimization based mapping method for solving virtual network mapping problem. This method divides the problem into two phases, node mapping phase and link mapping phase, which are all NP-hard problems. Node mapping algorithm and link mapping algorithm are proposed for solving node mapping phase and link mapping phase, respectively. Node mapping algorithm adopts the thinking of greedy algorithm, mainly considers two factors, available resources which are supplied by the nodes and distance between the nodes. Link mapping algorithm is based on the result of node mapping phase, adopts the thinking of distributed constraint optimization method, which can guarantee to obtain the optimal mapping with the minimum network cost. Finally, simulation experiments are used to validate the method, and results show that the method performs very well.

  9. Relief Presentation on US National Park Service Maps

    NASA Astrophysics Data System (ADS)

    Patterson, Tom

    2018-05-01

    This paper examines the evolution of relief presentations on maps developed by Harpers Ferry Center, the media service center of the US National Park Service (NPS). Harpers Ferry Center produces the maps used by park visitors. I will discuss five park maps, each with a distinctive relief style and mode of production. They appear in rough chronological order of their development. Recent relief presentations are generally more detailed, colorful, and realistic than those from earlier years. Changing technology is largely responsible for the different relief styles found on park maps. Some relief treatments today were not possible, or imaginable, in 1977 when the NPS established the brochure program in its modern phase. Landscape heterogeneity is another factor behind the development of different relief styles. With over 400 park sites ranging from the glacial mountains of Alaska to the rolling piedmont of Virginia, a one-style-fits-all approach cannot adequately depict all landscapes. NPS maps serve some 300 million park visitors each year. Our ongoing effort to make understandable maps for this diverse audience has further spurred experiments in relief presentation.

  10. The visual attention saliency map for movie retrospection

    NASA Astrophysics Data System (ADS)

    Rogalska, Anna; Napieralski, Piotr

    2018-04-01

    The visual saliency map is becoming important and challenging for many scientific disciplines (robotic systems, psychophysics, cognitive neuroscience and computer science). Map created by the model indicates possible salient regions by taking into consideration face presence and motion which is essential in motion pictures. By combining we can obtain credible saliency map with a low computational cost.

  11. Putting Pluto's Geology on the Map

    NASA Image and Video Library

    2016-02-11

    This geological map covers a portion of Pluto's surface that measures 1,290 miles (2,070 kilometers) from top to bottom, and includes the vast nitrogen-ice plain informally named Sputnik Planum and surrounding terrain. The map is overlain with colors that represent different geological terrains. Each terrain, or unit, is defined by its texture and morphology -- smooth, pitted, craggy, hummocky or ridged, for example. How well a unit can be defined depends on the resolution of the images that cover it. All of the terrain in this map has been imaged at a resolution of approximately 1,050 feet (320 meters) per pixel or better, meaning scientists can map units with relative confidence. The various blue and greenish units that fill the center of the map represent different textures seen across Sputnik Planum, from the cellular terrain in the center and north, to the smooth and pitted plains in the south. The black lines represent the troughs that mark the boundaries of cellular regions in the nitrogen ice. The purple unit represents the chaotic, blocky mountain ranges that line Sputnik's western border, and the pink unit represents the scattered, floating hills at its eastern edge. The possible cryovolcanic feature informally named Wright Mons is mapped in red in the southern corner of the map. The rugged highlands of the informally named Cthulhu Regio is mapped in dark brown along the western edge, and is pockmarked by many large impact craters, mapped in yellow. The base map for this geologic map is a mosaic of 12 images obtained by the Long Range Reconnaissance Imager (LORRI) at a resolution of 1,280 feet (about 390 meters) per pixel. The mosaic was obtained at a range of approximately 48,000 miles (77,300 kilometers) from Pluto, about an hour and 40 minutes before New Horizons' closest approach on July 14, 2015. http://photojournal.jpl.nasa.gov/catalog/PIA20465

  12. Specification for the U.S. Geological Survey Historical Topographic Map Collection

    USGS Publications Warehouse

    Allord, Gregory J.; Walter, Jennifer L.; Fishburn, Kristin A.; Shea, Gale A.

    2014-01-01

    This document provides the detailed requirements for producing, archiving, and disseminating a comprehensive digital collection of topographic maps for the U.S. Geological Survey (USGS) Historical Topographic Map Collection (HTMC). The HTMC is a digital archive of about 190,000 printed topographic maps published by the USGS from the inception of the topographic mapping program in 1884 until the last paper topographic map using lithographic printing technology was published in 2006. The HTMC provides a comprehensive digital repository of all scales and all editions of USGS printed topographic maps that is easily discovered, browsed, and downloaded by the public at no cost. The HTMC provides ready access to maps that are no longer available for distribution in print. A digital file representing the original paper historical topographic map is produced for each historical map in the HTMC in georeferenced PDF (GeoPDF) format (a portable document format [PDF] with a geospatial extension).

  13. Geologic map of the Reyes Peak quadrangle, Ventura County, California

    USGS Publications Warehouse

    Minor, Scott A.

    2004-01-01

    New 1:24,000-scale geologic mapping in the Cuyama 30' x 60' quadrangle, in support of the USGS Southern California Areal Mapping Project (SCAMP), is contributing to a more complete understanding of the stratigraphy, structure, and tectonic evolution of the complex junction area between the NW-trending Coast Ranges and EW-trending western Transverse Ranges. The 1:24,000-scale geologic map of the Reyes Peak quadrangle, located in the eastern part of the Cuyama map area, is the final of six contiguous 7 ?' quadrangle geologic maps compiled for a more detailed portrayal and reevaluation of geologic structures and rock units shown on previous maps of the region (Carman, 1964; Dibblee, 1972; Vedder and others, 1973). SCAMP digital geologic maps of the five other contiguous quadrangles have recently been published (Minor, 1999; Kellogg, 1999, 2003; Stone and Cossette, 2000; Kellogg and Miggins, 2002). This digital compilation presents a new geologic map database for the Reyes Peak 7?' quadrangle, which is located in southern California about 75 km northwest of Los Angeles. The map database is at 1:24,000-scale resolution.

  14. Horizontal Cross Bracing Detail, Vertical Cross Bracing Detail, Horizontal Cross ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Horizontal Cross Bracing Detail, Vertical Cross Bracing Detail, Horizontal Cross Bracing Detail, Vertical Cross Bracing-End Detail - Cumberland Covered Bridge, Spanning Mississinewa River, Matthews, Grant County, IN

  15. Hyperspectral imaging—An advanced instrument concept for the EnMAP mission (Environmental Mapping and Analysis Programme)

    NASA Astrophysics Data System (ADS)

    Stuffler, Timo; Förster, Klaus; Hofer, Stefan; Leipold, Manfred; Sang, Bernhard; Kaufmann, Hermann; Penné, Boris; Mueller, Andreas; Chlebek, Christian

    2009-10-01

    In the upcoming generation of satellite sensors, hyperspectral instruments will play a significant role. This payload type is considered world-wide within different future planning. Our team has now successfully finalized the Phase B study for the advanced hyperspectral mission EnMAP (Environmental Mapping and Analysis Programme), Germans next optical satellite being scheduled for launch in 2012. GFZ in Potsdam has the scientific lead on EnMAP, Kayser-Threde in Munich is the industrial prime. The EnMAP instrument provides over 240 continuous spectral bands in the wavelength range between 420 and 2450 nm with a ground resolution of 30 m×30 m. Thus, the broad science and application community can draw from an extensive and highly resolved pool of information supporting the modeling and optimization process on their results. The performance of the hyperspectral instrument allows for a detailed monitoring, characterization and parameter extraction of rock/soil targets, vegetation, and inland and coastal waters on a global scale supporting a wide variety of applications in agriculture, forestry, water management and geology. The operation of an airborne system (ARES) as an element in the HGF hyperspectral network and the ongoing evolution concerning data handling and extraction procedures, will support the later inclusion process of EnMAP into the growing scientist and user communities.

  16. New Map Symbol System for Disaster Management

    NASA Astrophysics Data System (ADS)

    Marinova, Silvia T.

    2018-05-01

    In the last 10 years Bulgaria was frequently affected by natural and man-made disasters that caused considerable losses. According to the Bulgarian Disaster Management Act (2006) disaster management should be planned at local, regional and national level. Disaster protection is based on plans that include maps such as hazard maps, maps for protection, maps for evacuation planning, etc. Decision-making and cooperation between two or more neighboring municipalities or regions in crisis situation are still rendered difficult because the maps included in the plans differ in scale, colors, map symbols and cartographic design. To improve decision-making process in case of emergency and to reduce the number of human loss and property damages disaster management plans at local and regional level should be supported by detailed thematic maps created in accordance with uniform contents, map symbol system and design. The paper proposes a new symbol system for disaster management that includes a four level hierarchical classification of objects and phenomena according to their type and origin. All objects and phenomena of this classification are divided into five categories: disasters; infrastructure; protection services and infrastructure for protection; affected people and affected infrastructure; operational sites and activities. The symbols of these categories are shown with different background colors and shapes so that they are identifiable. All the symbols have simple but associative design. The new symbol system is used in the design of a series of maps for disaster management at local and regional level.

  17. Antigenic Maps of Influenza A(H3N2) Produced With Human Antisera Obtained After Primary Infection.

    PubMed

    Fonville, Judith M; Fraaij, Pieter L A; de Mutsert, Gerrie; Wilks, Samuel H; van Beek, Ruud; Fouchier, Ron A M; Rimmelzwaan, Guus F

    2016-01-01

    Antigenic characterization of influenza viruses is typically based on hemagglutination inhibition (HI) assay data for viral isolates tested against strain-specific postinfection ferret antisera. Here, similar virus characterizations were performed using serological data from humans with primary influenza A(H3N2) infection. We screened sera collected between 1995 and 2011 from children between 9 and 24 months of age for influenza virus antibodies, performed HI tests for the positive sera against 23 influenza viruses isolated between 1989 and 2011, and measured HI titers of antisera against influenza A(H3N2) from 24 ferrets against the same panel of viruses. Of the 17 positive human sera, 6 had a high response, showing HI patterns that would be expected from primary infection antisera, while 11 sera had lower, more dispersed patterns of reactivity that are not easily explained. The antigenic map based on the high-response human HI data was similar to the map created using ferret data. Although the overall structure of the ferret and human antigenic maps is similar, local differences in virus positions indicate that the human and ferret immune system might see antigenic properties of viruses differently. Further studies are needed to establish the degree of similarity between serological patterns in ferret and human data. © The Author 2015. Published by Oxford University Press for the Infectious Diseases Society of America.

  18. Implications of Web Mercator and its Use in Online Mapping

    USGS Publications Warehouse

    Battersby, Sarah E.; Finn, Michael P.; Usery, E. Lynn; Yamamoto, Kristina H.

    2014-01-01

    Online interactive maps have become a popular means of communicating with spatial data. In most online mapping systems, Web Mercator has become the dominant projection. While the Mercator projection has a long history of discussion about its inappropriateness for general-purpose mapping, particularly at the global scale, and seems to have been virtually phased out for general-purpose global-scale print maps, it has seen a resurgence in popularity in Web Mercator form. This article theorizes on how Web Mercator came to be widely used for online maps and what this might mean in terms of data display, technical aspects of map generation and distribution, design, and cognition of spatial patterns. The authors emphasize details of where the projection excels and where it does not, as well as some of its advantages and disadvantages for cartographic communication, and conclude with some research directions that may help to develop better solutions to the problem of projections for general-purpose, multi-scale Web mapping.

  19. Preliminary geologic map of the Piru 7.5' quadrangle, southern California: a digital database

    USGS Publications Warehouse

    Yerkes, R.F.; Campbell, Russell H.

    1995-01-01

    This Open-File report is a digital geologic map database. This pamphlet serves to introduce and describe the digital data. There is no paper map included in the Open-File report. This digital map database is compiled from previously published sources combined with some new mapping and modifications in nomenclature. The geologic map database delineates map units that are identified by general age and lithology following the stratigraphic nomenclature of the U. S. Geological Survey. For detailed descriptions of the units, their stratigraphic relations and sources of geologic mapping consult Yerkes and Campbell (1995). More specific information about the units may be available in the original sources.

  20. BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes.

    PubMed

    Staňková, Helena; Hastie, Alex R; Chan, Saki; Vrána, Jan; Tulpová, Zuzana; Kubaláková, Marie; Visendi, Paul; Hayashi, Satomi; Luo, Mingcheng; Batley, Jacqueline; Edwards, David; Doležel, Jaroslav; Šimková, Hana

    2016-07-01

    The assembly of a reference genome sequence of bread wheat is challenging due to its specific features such as the genome size of 17 Gbp, polyploid nature and prevalence of repetitive sequences. BAC-by-BAC sequencing based on chromosomal physical maps, adopted by the International Wheat Genome Sequencing Consortium as the key strategy, reduces problems caused by the genome complexity and polyploidy, but the repeat content still hampers the sequence assembly. Availability of a high-resolution genomic map to guide sequence scaffolding and validate physical map and sequence assemblies would be highly beneficial to obtaining an accurate and complete genome sequence. Here, we chose the short arm of chromosome 7D (7DS) as a model to demonstrate for the first time that it is possible to couple chromosome flow sorting with genome mapping in nanochannel arrays and create a de novo genome map of a wheat chromosome. We constructed a high-resolution chromosome map composed of 371 contigs with an N50 of 1.3 Mb. Long DNA molecules achieved by our approach facilitated chromosome-scale analysis of repetitive sequences and revealed a ~800-kb array of tandem repeats intractable to current DNA sequencing technologies. Anchoring 7DS sequence assemblies obtained by clone-by-clone sequencing to the 7DS genome map provided a valuable tool to improve the BAC-contig physical map and validate sequence assembly on a chromosome-arm scale. Our results indicate that creating genome maps for the whole wheat genome in a chromosome-by-chromosome manner is feasible and that they will be an affordable tool to support the production of improved pseudomolecules. © 2016 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.

  1. Mapping Computation with No Memory

    NASA Astrophysics Data System (ADS)

    Burckel, Serge; Gioan, Emeric; Thomé, Emmanuel

    We investigate the computation of mappings from a set S n to itself with in situ programs, that is using no extra variables than the input, and performing modifications of one component at a time. We consider several types of mappings and obtain effective computation and decomposition methods, together with upper bounds on the program length (number of assignments). Our technique is combinatorial and algebraic (graph coloration, partition ordering, modular arithmetics).

  2. Mapping the Frozen Void

    NASA Astrophysics Data System (ADS)

    Suutarinen, Aleksi; Fraser, Helen

    2013-07-01

    Reactions on the surfaces of dust grains play a vital role in the overall chemistry of interstellar matter. These grains become covered by icy layers, which are the largest molecular reservoir in the interstellar medium. Given this, it is surprising that the effect ice has on the overall chain of reactions is poorly characterized. One step on the path of gaining better understanding here is to develop methods of figuring out how much ice is present in these clouds, the links between ice components, and synergy between the ices and gas phase molecules. We do this by examining the absorption spectra of ices on lines of sight towards several stars behind clouds of interstellar matter. From these we can reconstruct spatial maps of the ice distribution on scales of as little as 1000 AU, as a test of the chemical variation within a cloud. By overlapping the ice data with other maps of the same region (gas emission, temperature, density etc) we create combined maps to reveal the astrochemistry of star-forming regions and pre-stellar cores. In this poster we present the continuing results of our ice mapping programme, using data from the AKARI satellite, specifically in slitless spectroscopy observations in the NIR. In this region the key ice features encompass H2O, CO and CO2. The maps illustrate the power of our dedicated AKARI data reduction pipeline, and the novelty of our observing programme. We also detail the next steps' in our ice mapping research. The method is being expanded to include the full 10'x10' AKARI field of view, taking account of image distortion induced by the dispersing optics. These maps are then combined with exiting gas-phase observations and SCUBA maps. The latest attempts at this are shown here. What is clear already is that it is difficult to predict ice abundances from factors such as extinction or gas density alone, and that ice formation and evolution can vary hugely over even very small astronomical scales.

  3. Mapping the Rainforest of the Sea: Global Coral Reef Maps for Global Conservation

    NASA Technical Reports Server (NTRS)

    Robinson, Julie A.

    2006-01-01

    Coral reefs are the center of marine biodiversity, yet are under threat with an estimated 60% of coral reef habitats considered at risk by the World Resources Institute. The location and extent of coral reefs in the world are the basic information required for resource management and as a baseline for monitoring change. A NASA sponsored partnership between remote sensing scientists, international agencies and NGOs, has developed a new generation of global reef maps based on data collected by satellites. The effort, dubbed the Millennium Coral Reef Map aims to develop new methods for wide distribution of voluminous satellite data of use to the conservation and management communities. We discuss the tradeoffs between remote sensing data sources, mapping objectives, and the needs for conservation and resource management. SeaWiFS data were used to produce a composite global shallow bathymetry map at 1 km resolution. Landsat 7/ETM+ data acquisition plans were modified to collect global reefs and new operational methods were designed to generate the firstever global coral reef geomorphology map. We discuss the challenges encountered to build these databases and in implementing the geospatial data distribution strategies. Conservation applications include a new assessment of the distribution of the world s marine protected areas (UNEPWCMC), improved spatial resolution in the Reefs at Risk analysis for the Caribbean (WRI), and a global basemap for the Census of Marine Life's OBIS database. The Millennium Coral Reef map and digital image archive will pay significant dividends for local and regional conservation projects around the globe. Complete details of the project are available at http://eol.jsc.nasa.gov/reefs.

  4. Mapping knowledge domains: Characterizing PNAS

    PubMed Central

    Boyack, Kevin W.

    2004-01-01

    A review of data mining and analysis techniques that can be used for the mapping of knowledge domains is given. Literature mapping techniques can be based on authors, documents, journals, words, and/or indicators. Most mapping questions are related to research assessment or to the structure and dynamics of disciplines or networks. Several mapping techniques are demonstrated on a data set comprising 20 years of papers published in PNAS. Data from a variety of sources are merged to provide unique indicators of the domain bounded by PNAS. By using funding source information and citation counts, it is shown that, on an aggregate basis, papers funded jointly by the U.S. Public Health Service (which includes the National Institutes of Health) and non-U.S. government sources outperform papers funded by other sources, including by the U.S. Public Health Service alone. Grant data from the National Institute on Aging show that, on average, papers from large grants are cited more than those from small grants, with performance increasing with grant amount. A map of the highest performing papers over the 20-year period was generated by using citation analysis. Changes and trends in the subjects of highest impact within the PNAS domain are described. Interactions between topics over the most recent 5-year period are also detailed. PMID:14963238

  5. Soil-Gas Radon Anomaly Map of an Unknown Fault Zone Area, Chiang Mai, Northern Thailand

    NASA Astrophysics Data System (ADS)

    Udphuay, S.; Kaweewong, C.; Imurai, W.; Pondthai, P.

    2015-12-01

    Soil-gas radon concentration anomaly map was constructed to help detect an unknown subsurface fault location in San Sai District, Chiang Mai Province, Northern Thailand where a 5.1-magnitude earthquake took place in December 2006. It was suspected that this earthquake may have been associated with an unrecognized active fault in the area. In this study, soil-gas samples were collected from eighty-four measuring stations covering an area of approximately 50 km2. Radon in soil-gas samples was quantified using Scintrex Radon Detector, RDA-200. The samplings were conducted twice: during December 2014-January 2015 and March 2015-April 2015. The soil-gas radon map obtained from this study reveals linear NNW-SSE trend of high concentration. This anomaly corresponds to the direction of the prospective fault system interpreted from satellite images. The findings from this study support the existence of this unknown fault system. However a more detailed investigation should be conducted in order to confirm its geometry, orientation and lateral extent.

  6. Stochastic maps, continuous approximation, and stable distribution

    NASA Astrophysics Data System (ADS)

    Kessler, David A.; Burov, Stanislav

    2017-10-01

    A continuous approximation framework for general nonlinear stochastic as well as deterministic discrete maps is developed. For the stochastic map with uncorelated Gaussian noise, by successively applying the Itô lemma, we obtain a Langevin type of equation. Specifically, we show how nonlinear maps give rise to a Langevin description that involves multiplicative noise. The multiplicative nature of the noise induces an additional effective force, not present in the absence of noise. We further exploit the continuum description and provide an explicit formula for the stable distribution of the stochastic map and conditions for its existence. Our results are in good agreement with numerical simulations of several maps.

  7. Structure-Function Network Mapping and Its Assessment via Persistent Homology

    PubMed Central

    2017-01-01

    Understanding the relationship between brain structure and function is a fundamental problem in network neuroscience. This work deals with the general method of structure-function mapping at the whole-brain level. We formulate the problem as a topological mapping of structure-function connectivity via matrix function, and find a stable solution by exploiting a regularization procedure to cope with large matrices. We introduce a novel measure of network similarity based on persistent homology for assessing the quality of the network mapping, which enables a detailed comparison of network topological changes across all possible thresholds, rather than just at a single, arbitrary threshold that may not be optimal. We demonstrate that our approach can uncover the direct and indirect structural paths for predicting functional connectivity, and our network similarity measure outperforms other currently available methods. We systematically validate our approach with (1) a comparison of regularized vs. non-regularized procedures, (2) a null model of the degree-preserving random rewired structural matrix, (3) different network types (binary vs. weighted matrices), and (4) different brain parcellation schemes (low vs. high resolutions). Finally, we evaluate the scalability of our method with relatively large matrices (2514x2514) of structural and functional connectivity obtained from 12 healthy human subjects measured non-invasively while at rest. Our results reveal a nonlinear structure-function relationship, suggesting that the resting-state functional connectivity depends on direct structural connections, as well as relatively parsimonious indirect connections via polysynaptic pathways. PMID:28046127

  8. Geologic map and guide of the island of Oahu, Hawaii

    USGS Publications Warehouse

    Stearns, Harold T.

    1939-01-01

    This bulletin, although designated Bulletin 2, is actually the fourth of a series published by the Division of Hydrography of the Territory of Hawaii. All four of the bulletins thus far published relate to the geology and ground-water resources of the island of Oahu.1 Together they present the results obtained on this island in the program of ground-water investigation of the Territory that has been conducted in cooperation with the Geological Survey, of the United States Department of the Interior. Bulletin 5 which is in preparation will describe the progress made in developing the ground-water resources of Oahu since Bulletin 1 was issued. In Bulletin 2 is presented the detailed geologic map of Oahu that has resulted from this investigation. The base for this map is the new topographic map of Oahu prepared by the Topographic Branch of the Geological Survey. This bulletin also contains a guide to the geology along the main highways, which can be used advantageously in connection with the geologic map. For 18 years the writer has had the great privilege of working under the technical direction of Mr. 0. E. Meinzer, geologist in charge of the Division of Ground Water, U. S. Geological Survey. Nearly two decades ago Mr. Meinzer envisioned the great benefits that the people of Hawaii would derive from a thorough study of the groundwater resources of these islands. He also recognized that a full knowledge of these resources could be obtained only by a complete understanding of the geology of the islands and the processes which formed them. This bulletin is one of a series that has been made possible largely as a result of his broad vision. Credit is due Mr. W. 0 . Clark for the location of all the dikes shown on plate 2 in the headwaters of Kamananui Stream near the north end of the Koolau Range, and to Dr. C. K. Wentworth for about a dozen dikes north of Kaimuki. Messrs. 0. E. Meinzer, G. R. Mansfield, M. H. Carson, G. A. Macdonald, and S. H. Elbert kindly criticized

  9. A high-throughput shotgun mutagenesis approach to mapping B-cell antibody epitopes.

    PubMed

    Davidson, Edgar; Doranz, Benjamin J

    2014-09-01

    Characterizing the binding sites of monoclonal antibodies (mAbs) on protein targets, their 'epitopes', can aid in the discovery and development of new therapeutics, diagnostics and vaccines. However, the speed of epitope mapping techniques has not kept pace with the increasingly large numbers of mAbs being isolated. Obtaining detailed epitope maps for functionally relevant antibodies can be challenging, particularly for conformational epitopes on structurally complex proteins. To enable rapid epitope mapping, we developed a high-throughput strategy, shotgun mutagenesis, that enables the identification of both linear and conformational epitopes in a fraction of the time required by conventional approaches. Shotgun mutagenesis epitope mapping is based on large-scale mutagenesis and rapid cellular testing of natively folded proteins. Hundreds of mutant plasmids are individually cloned, arrayed in 384-well microplates, expressed within human cells, and tested for mAb reactivity. Residues are identified as a component of a mAb epitope if their mutation (e.g. to alanine) does not support candidate mAb binding but does support that of other conformational mAbs or allows full protein function. Shotgun mutagenesis is particularly suited for studying structurally complex proteins because targets are expressed in their native form directly within human cells. Shotgun mutagenesis has been used to delineate hundreds of epitopes on a variety of proteins, including G protein-coupled receptor and viral envelope proteins. The epitopes mapped on dengue virus prM/E represent one of the largest collections of epitope information for any viral protein, and results are being used to design better vaccines and drugs. © 2014 John Wiley & Sons Ltd.

  10. Detailed 3D Geophysical Model of the Shallow Subsurface (Zancara River Basin, Iberian Peninsula)

    NASA Astrophysics Data System (ADS)

    Carbonell, R.; Marzán, I.; Martí, D.; Lobo, A.; Jean, K.; Alvarez-Marrón, J.

    2016-12-01

    Detailed knowledge of the structure and lithologies of the shallow subsurface is required when designing and building singular geological storage facilities this is the case of the study area in Villar de Cañas (Cuenca, Central Spain). In which an extensive multidisciplinary data acquisition program has been carried out. This include studies on: geology, hydrology, geochemistry, geophysics, borehole logging, etc. Because of this data infrastructure, it can be considered a subsurface imaging laboratory to test and validate indirect underground characterization approaches. The field area is located in a Miocene syncline within the Záncara River Basin (Cuenca, Spain). The sedimentary sequence consists in a transition from shales to massive gypsums, and underlying gravels. The stratigraphic succession features a complex internal structure, diffused lithological boundaries and relatively large variability of properties within the same lithology, these makes direct geological interpretation very difficult and requires of the integration of all the measured physical properties. The ERT survey, the seismic tomography data and the logs have been used jointly to build a 3-D multi-parameter model of the subsurface in a surface of 500x500 m. The Vp model (a 10x20x5 m grid) is able to map the high velocities of the massive gypsum, however it was neither able to map the details of the shale-gypsm transition (low velocity contrast) nor to differentiate the outcropping altered gypsum from the weathered shales. The integration of the electrical resistivity and the log data by means of a supervised statistical tools (Linear Discriminant Analysis, LDA) resulted in a new 3D multiparametric subsurface model. This new model integrates the different data sets resolving the uncertainties characteristic of the models obtained independently by the different techniques separately. Furthermore, this test seismic dataset has been used to test FWI approaches in order to study their capacities

  11. Incorporating Aptamers in the Multiple Analyte Profiling Assays (xMAP): Detection of C-Reactive Protein.

    PubMed

    Bernard, Elyse D; Nguyen, Kathy C; DeRosa, Maria C; Tayabali, Azam F; Aranda-Rodriguez, Rocio

    2017-01-01

    Aptamers are short oligonucleotide sequences used in detection systems because of their high affinity binding to a variety of macromolecules. With the introduction of aptamers over 25 years ago came the exploration of their use in many different applications as a substitute for antibodies. Aptamers have several advantages; they are easy to synthesize, can bind to analytes for which it is difficult to obtain antibodies, and in some cases bind better than antibodies. As such, aptamer applications have significantly expanded as an adjunct to a variety of different immunoassay designs. The Multiple-Analyte Profiling (xMAP) technology developed by Luminex Corporation commonly uses antibodies for the detection of analytes in small sample volumes through the use of fluorescently coded microbeads. This technology permits the simultaneous detection of multiple analytes in each sample tested and hence could be applied in many research fields. Although little work has been performed adapting this technology for use with apatmers, optimizing aptamer-based xMAP assays would dramatically increase the versatility of analyte detection. We report herein on the development of an xMAP bead-based aptamer/antibody sandwich assay for a biomarker of inflammation (C-reactive protein or CRP). Protocols for the coupling of aptamers to xMAP beads, validation of coupling, and for an aptamer/antibody sandwich-type assay for CRP are detailed. The optimized conditions, protocols and findings described in this research could serve as a starting point for the development of new aptamer-based xMAP assays.

  12. Phenotypic mapping of metabolic profiles using self-organizing maps of high-dimensional mass spectrometry data.

    PubMed

    Goodwin, Cody R; Sherrod, Stacy D; Marasco, Christina C; Bachmann, Brian O; Schramm-Sapyta, Nicole; Wikswo, John P; McLean, John A

    2014-07-01

    A metabolic system is composed of inherently interconnected metabolic precursors, intermediates, and products. The analysis of untargeted metabolomics data has conventionally been performed through the use of comparative statistics or multivariate statistical analysis-based approaches; however, each falls short in representing the related nature of metabolic perturbations. Herein, we describe a complementary method for the analysis of large metabolite inventories using a data-driven approach based upon a self-organizing map algorithm. This workflow allows for the unsupervised clustering, and subsequent prioritization of, correlated features through Gestalt comparisons of metabolic heat maps. We describe this methodology in detail, including a comparison to conventional metabolomics approaches, and demonstrate the application of this method to the analysis of the metabolic repercussions of prolonged cocaine exposure in rat sera profiles.

  13. Interactive Geophysical Mapping on the Web

    NASA Astrophysics Data System (ADS)

    Meertens, C.; Hamburger, M.; Estey, L.; Weingroff, M.; Deardorff, R.; Holt, W.

    2002-12-01

    We have developed a set of interactive, web-based map utilities that make geophysical results accessible to a large number and variety of users. These tools provide access to pre-determined map regions via a simple Html/JavaScript interface or to user-selectable areas using a Java interface to a Generic Mapping Tools (GMT) engine. Users can access a variety of maps, satellite images, and geophysical data at a range of spatial scales for the earth and other planets of the solar system. Developed initially by UNAVCO for study of global-scale geodynamic processes, users can choose from a variety of base maps (satellite mosaics, global topography, geoid, sea-floor age, strain rate and seismic hazard maps, and others) and can then add a number of geographic and geophysical overlays for example coastlines, political boundaries, rivers and lakes, NEIC earthquake and volcano locations, stress axes, and observed and model plate motion and deformation velocity vectors representing a compilation of 2933 geodetic measurements from around the world. The software design is flexible allowing for construction of special editions for different target audiences. Custom maps been implemented for UNAVCO as the "Jules Verne Voyager" and "Voyager Junior", for the International Lithosphere Project's "Global Strain Rate Map", and for EarthScope Education and Outreach as "EarthScope Voyager Jr.". For the later, a number of EarthScope-specific features have been added, including locations of proposed USArray (seismic), Plate Boundary Observatory (geodetic), and San Andreas Fault Observatory at Depth sites plus detailed maps and geographically referenced examples of EarthScope-related scientific investigations. In addition, we are developing a website that incorporates background materials and curricular activities that encourage users to explore Earth processes. A cluster of map processing computers and nearly a terabyte of disk storage has been assembled to power the generation of

  14. Identification, definition and mapping of terrestrial ecosystems in interior Alaska

    NASA Technical Reports Server (NTRS)

    Anderson, J. H. (Principal Investigator)

    1973-01-01

    The author has identified the following significant results. The primary objective is to identify and analyze vegetation types in as great of detail as possible on ERTS-1 imagery and to classify and delineate them through mapping. This is basic to the identification, definition, and mapping of ecosystems. Major conclusions are: (1) the ERTS-1 system is useful for regional scale studies of broadly defined Alaskan vegetation types; (2) the resolution and spectral capabilities of ERTS-1 MSS imagery in photographic formats is adequate for certain phytecenologic purposes; and (3) preparation of an improved State vegetation map will be feasible.

  15. Fine resolution mapping of population age-structures for health and development applications

    PubMed Central

    Alegana, V. A.; Atkinson, P. M.; Pezzulo, C.; Sorichetta, A.; Weiss, D.; Bird, T.; Erbach-Schoenberg, E.; Tatem, A. J.

    2015-01-01

    The age-group composition of populations varies considerably across the world, and obtaining accurate, spatially detailed estimates of numbers of children under 5 years is important in designing vaccination strategies, educational planning or maternal healthcare delivery. Traditionally, such estimates are derived from population censuses, but these can often be unreliable, outdated and of coarse resolution for resource-poor settings. Focusing on Nigeria, we use nationally representative household surveys and their cluster locations to predict the proportion of the under-five population in 1 × 1 km using a Bayesian hierarchical spatio-temporal model. Results showed that land cover, travel time to major settlements, night-time lights and vegetation index were good predictors and that accounting for fine-scale variation, rather than assuming a uniform proportion of under 5 year olds can result in significant differences in health metrics. The largest gaps in estimated bednet and vaccination coverage were in Kano, Katsina and Jigawa. Geolocated household surveys are a valuable resource for providing detailed, contemporary and regularly updated population age-structure data in the absence of recent census data. By combining these with covariate layers, age-structure maps of unprecedented detail can be produced to guide the targeting of interventions in resource-poor settings. PMID:25788540

  16. Fine resolution mapping of population age-structures for health and development applications.

    PubMed

    Alegana, V A; Atkinson, P M; Pezzulo, C; Sorichetta, A; Weiss, D; Bird, T; Erbach-Schoenberg, E; Tatem, A J

    2015-04-06

    The age-group composition of populations varies considerably across the world, and obtaining accurate, spatially detailed estimates of numbers of children under 5 years is important in designing vaccination strategies, educational planning or maternal healthcare delivery. Traditionally, such estimates are derived from population censuses, but these can often be unreliable, outdated and of coarse resolution for resource-poor settings. Focusing on Nigeria, we use nationally representative household surveys and their cluster locations to predict the proportion of the under-five population in 1 × 1 km using a Bayesian hierarchical spatio-temporal model. Results showed that land cover, travel time to major settlements, night-time lights and vegetation index were good predictors and that accounting for fine-scale variation, rather than assuming a uniform proportion of under 5 year olds can result in significant differences in health metrics. The largest gaps in estimated bednet and vaccination coverage were in Kano, Katsina and Jigawa. Geolocated household surveys are a valuable resource for providing detailed, contemporary and regularly updated population age-structure data in the absence of recent census data. By combining these with covariate layers, age-structure maps of unprecedented detail can be produced to guide the targeting of interventions in resource-poor settings.

  17. Fast Mapping Across Time: Memory Processes Support Children's Retention of Learned Words.

    PubMed

    Vlach, Haley A; Sandhofer, Catherine M

    2012-01-01

    Children's remarkable ability to map linguistic labels to referents in the world is commonly called fast mapping. The current study examined children's (N = 216) and adults' (N = 54) retention of fast-mapped words over time (immediately, after a 1-week delay, and after a 1-month delay). The fast mapping literature often characterizes children's retention of words as consistently high across timescales. However, the current study demonstrates that learners forget word mappings at a rapid rate. Moreover, these patterns of forgetting parallel forgetting functions of domain-general memory processes. Memory processes are critical to children's word learning and the role of one such process, forgetting, is discussed in detail - forgetting supports extended mapping by promoting the memory and generalization of words and categories.

  18. Hydrographic surveys of rivers and lakes using a multibeam echosounder mapping system

    USGS Publications Warehouse

    Huizinga, Richard J.; Heimann, David C.

    2018-06-12

    A multibeam echosounder is a type of sound navigation and ranging device that uses sound waves to “see” through even murky waters. Unlike a single beam echosounder (also known as a depth sounder or fathometer) that releases a single sound pulse in a single, narrow beam and “listens” for the return echo, a multibeam system emits a multidirectional radial beam to obtain information within a fan-shaped swath. The timing and direction of the returning sound waves provide detailed information on the depth of water and the shape of the river channel, lake bottom, or any underwater features of interest. This information has been used by the U.S. Geological Survey to efficiently generate high-resolution maps of river and lake bottoms.

  19. Two-component Thermal Dust Emission Model: Application to the Planck HFI Maps

    NASA Astrophysics Data System (ADS)

    Meisner, Aaron M.; Finkbeiner, Douglas P.

    2014-06-01

    We present full-sky, 6.1 arcminute resolution maps of dust optical depth and temperature derived by fitting the Finkbeiner et al. (1999) two-component dust emission model to the Planck HFI and IRAS 100 micron maps. This parametrization of the far infrared thermal dust SED as the sum of two modified blackbodies serves as an important alternative to the commonly adopted single modified blackbody dust emission model. We expect our Planck-based maps of dust temperature and optical depth to form the basis for a next-generation, high-resolution extinction map which will additionally incorporate small-scale detail from WISE imaging.

  20. MPEG-4 AVC saliency map computation

    NASA Astrophysics Data System (ADS)

    Ammar, M.; Mitrea, M.; Hasnaoui, M.

    2014-02-01

    A saliency map provides information about the regions inside some visual content (image, video, ...) at which a human observer will spontaneously look at. For saliency maps computation, current research studies consider the uncompressed (pixel) representation of the visual content and extract various types of information (intensity, color, orientation, motion energy) which are then fusioned. This paper goes one step further and computes the saliency map directly from the MPEG-4 AVC stream syntax elements with minimal decoding operations. In this respect, an a-priori in-depth study on the MPEG-4 AVC syntax elements is first carried out so as to identify the entities appealing the visual attention. Secondly, the MPEG-4 AVC reference software is completed with software tools allowing the parsing of these elements and their subsequent usage in objective benchmarking experiments. This way, it is demonstrated that an MPEG-4 saliency map can be given by a combination of static saliency and motion maps. This saliency map is experimentally validated under a robust watermarking framework. When included in an m-QIM (multiple symbols Quantization Index Modulation) insertion method, PSNR average gains of 2.43 dB, 2.15dB, and 2.37 dB are obtained for data payload of 10, 20 and 30 watermarked blocks per I frame, i.e. about 30, 60, and 90 bits/second, respectively. These quantitative results are obtained out of processing 2 hours of heterogeneous video content.

  1. Landslide susceptibility mapping for a part of North Anatolian Fault Zone (Northeast Turkey) using logistic regression model

    NASA Astrophysics Data System (ADS)

    Demir, Gökhan; aytekin, mustafa; banu ikizler, sabriye; angın, zekai

    2013-04-01

    The North Anatolian Fault is know as one of the most active and destructive fault zone which produced many earthquakes with high magnitudes. Along this fault zone, the morphology and the lithological features are prone to landsliding. However, many earthquake induced landslides were recorded by several studies along this fault zone, and these landslides caused both injuiries and live losts. Therefore, a detailed landslide susceptibility assessment for this area is indispancable. In this context, a landslide susceptibility assessment for the 1445 km2 area in the Kelkit River valley a part of North Anatolian Fault zone (Eastern Black Sea region of Turkey) was intended with this study, and the results of this study are summarized here. For this purpose, geographical information system (GIS) and a bivariate statistical model were used. Initially, Landslide inventory maps are prepared by using landslide data determined by field surveys and landslide data taken from General Directorate of Mineral Research and Exploration. The landslide conditioning factors are considered to be lithology, slope gradient, slope aspect, topographical elevation, distance to streams, distance to roads and distance to faults, drainage density and fault density. ArcGIS package was used to manipulate and analyze all the collected data Logistic regression method was applied to create a landslide susceptibility map. Landslide susceptibility maps were divided into five susceptibility regions such as very low, low, moderate, high and very high. The result of the analysis was verified using the inventoried landslide locations and compared with the produced probability model. For this purpose, Area Under Curvature (AUC) approach was applied, and a AUC value was obtained. Based on this AUC value, the obtained landslide susceptibility map was concluded as satisfactory. Keywords: North Anatolian Fault Zone, Landslide susceptibility map, Geographical Information Systems, Logistic Regression Analysis.

  2. Surface Rupture Map of the 2002 M7.9 Denali Fault Earthquake, Alaska: Digital Data

    USGS Publications Warehouse

    Haeussler, Peter J.

    2009-01-01

    The November 3, 2002, Mw7.9 Denali Fault earthquake produced about 340 km of surface rupture along the Susitna Glacier Thrust Fault and the right-lateral, strike-slip Denali and Totschunda Faults. Digital photogrammetric methods were primarily used to create a 1:500-scale, three-dimensional surface rupture map, and 1:6,000-scale aerial photographs were used for three-dimensional digitization in ESRI's ArcMap GIS software, using Leica's StereoAnalyst plug in. Points were digitized 4.3 m apart, on average, for the entire surface rupture. Earthquake-induced landslides, sackungen, and unruptured Holocene fault scarps on the eastern Denali Fault were also digitized where they lay within the limits of air photo coverage. This digital three-dimensional fault-trace map is superior to traditional maps in terms of relative and absolute accuracy, completeness, and detail and is used as a basis for three-dimensional visualization. Field work complements the air photo observations in locations of dense vegetation, on bedrock, or in areas where the surface trace is weakly developed. Seventeen km of the fault trace, which broke through glacier ice, were not digitized in detail due to time constraints, and air photos missed another 10 km of fault rupture through the upper Black Rapids Glacier, so that was not mapped in detail either.

  3. Multipurpose bedrock surficial, and environmental geologic maps, New River valley, southwest Virginia

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schultz, A.; Collins, T.

    1994-03-01

    Multipurpose bedrock, surficial, and environmental geologic maps have recently been completed for portions of the Valley and Ridge province of southwest VA. The maps, at both 1:100,000 and 1:24,000 scales, show generalized and detailed bedrock geology grouped by lithology and environmental hazard associations. Also shown are a variety of alluvial, colluvial, debris flow, and landslide deposits, as well as karst features. Multidisciplinary research topics addressed during the mapping included slope evolution and geomorphology, drainage history and terrace distribution, ancient large-scale landsliding, and sinkhole development. The maps have been used by land-use planners and engineering firms in an evaluation of Appalachianmore » paleoseismicity and to assess potential groundwater contamination and subsidence in karst areas. The maps are being used for environmental hazard assessment and site selection of a proposed large electric powerline that crosses the Jefferson National Forest. Also, the maps are proving useful in planning for a public access interpretive geologic enter focused on large-scale slope failures. Some of the largest known landslides in eastern North America took place within the map area. Field comparisons and detailed structure mapping of similar features along the Front Range of the Colorado Rockies indicate that the landslides were probably emplaced during a single catastrophic event of short duration. Although the giles County seismic zone is nearby, stability analyses of slopes in the map area have shown that failure need not have been initiated by a seismic event. Several distinct colluvial units mapped within the area of landslides document a period of extensive weathering that postdates slide emplacement. Radiocarbon dates from landslide sag ponds indicate a minimum age of 9,860 B.P. for emplacement of some of the landslides. These results indicate that pre-slide colluvial and debris flow deposits are at least Pleistocene in age.« less

  4. Saturation of an Intra-Gene Pool Linkage Map: Towards a Unified Consensus Linkage Map for Fine Mapping and Synteny Analysis in Common Bean

    PubMed Central

    Galeano, Carlos H.; Fernandez, Andrea C.; Franco-Herrera, Natalia; Cichy, Karen A.; McClean, Phillip E.; Vanderleyden, Jos; Blair, Matthew W.

    2011-01-01

    Map-based cloning and fine mapping to find genes of interest and marker assisted selection (MAS) requires good genetic maps with reproducible markers. In this study, we saturated the linkage map of the intra-gene pool population of common bean DOR364×BAT477 (DB) by evaluating 2,706 molecular markers including SSR, SNP, and gene-based markers. On average the polymorphism rate was 7.7% due to the narrow genetic base between the parents. The DB linkage map consisted of 291 markers with a total map length of 1,788 cM. A consensus map was built using the core mapping populations derived from inter-gene pool crosses: DOR364×G19833 (DG) and BAT93×JALO EEP558 (BJ). The consensus map consisted of a total of 1,010 markers mapped, with a total map length of 2,041 cM across 11 linkage groups. On average, each linkage group on the consensus map contained 91 markers of which 83% were single copy markers. Finally, a synteny analysis was carried out using our highly saturated consensus maps compared with the soybean pseudo-chromosome assembly. A total of 772 marker sequences were compared with the soybean genome. A total of 44 syntenic blocks were identified. The linkage group Pv6 presented the most diverse pattern of synteny with seven syntenic blocks, and Pv9 showed the most consistent relations with soybean with just two syntenic blocks. Additionally, a co-linear analysis using common bean transcript map information against soybean coding sequences (CDS) revealed the relationship with 787 soybean genes. The common bean consensus map has allowed us to map a larger number of markers, to obtain a more complete coverage of the common bean genome. Our results, combined with synteny relationships provide tools to increase marker density in selected genomic regions to identify closely linked polymorphic markers for indirect selection, fine mapping or for positional cloning. PMID:22174773

  5. Regional and Detailed Survey for Radon Activities in Soil-Gas and Groundwater in the Okchon Zone, Korea

    NASA Astrophysics Data System (ADS)

    Je, H.-K.; Chon, H.-T.

    2012-04-01

    The Okchon zone in Korea provides a typical example of natural geological materials enriched in potentially toxic elements including uranium which is parent nuclide for radon gas. For the purpose of radon radioactivity risk assessment, making the map of radon risk grade from Okchon zone, regional and detailed field surveys were carried out during 3 years. The study area is located in the central part of Korea, called the Okchon zone (about 5,100 km2), which occur in a 80km wide, northeast-trending belt that extends across the Korean Peninsula. The Okchon zone is underlain by metasedimentary rocks of unknown age that are composed mainly of black slate, phyllite, shale, and limestone. The three research areas (defined as Boeun, Chungju, and Nonsan) for detailed survey were selected from the results of regional survey. Results of detailed radon survey indicated a wide range of radon activities for soil-gases (148-1,843 pCi/L) and ground waters (23-5,540 pCi/L). About 15 percent of soil-gas samples exceeded 1,000 pCi/L and 84 percent of ground water samples exceeded the MCL (maximum contaminant level) of drinking water, 300 pCi/L, which proposed by U.S. Environmental Protection Agency in 1999. For detailed survey, radon activities of soil-gas and ground water were classified as bedrock geology, based on 1/50,000 geological map and field research. For soil-gas measurements, mean values of radon activity from black slate-shale (789 pCi/L) were highest among the other base rocks. And for groundwater measurements, mean value of radon activities were decreased in the order of granite (1,345 pCi/L) > black shale-slate (915 pCi/L) > metasediments (617 pCi/L). Result of indoor radon measurement from detailed survey areas showed that about 50% of houses exceeded the indoor guideline, 4 pCi/L. For the radon risk assessment in indoor environment showed that probability of lung cancer risk from the houses located on the granite base rock (3.0×10-2) was highest among the other

  6. Geologic Map and GIS Data for the Tuscarora Geothermal Area

    DOE Data Explorer

    Faulds, James E.

    2013-12-31

    Tuscarora—ESRI Geodatabase (ArcGeology v1.3): - Contains all the geologic map data, including faults, contacts, folds, unit polygons, and attitudes of strata and faults. - List of stratigraphic units and stratigraphic correlation diagram. - Detailed unit descriptions of stratigraphic units. - Five cross‐sections. - Locations of production, injection, and monitor wells. - 3D model constructed with EarthVision using geologic map data, cross‐sections, drill‐hole data, and geophysics (model not in the ESRI geodatabase).

  7. 71. MISSISSIPPI, LOWNDES CO. COLUMBUSSTEENS MAP OF LOWNDES COUNTY, 1931 ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    71. MISSISSIPPI, LOWNDES CO. COLUMBUS-STEENS MAP OF LOWNDES COUNTY, 1931 Detail of ROAD MAP OF LOWNDES COUNTY, MISSISSIPPI, 1931 by C. L. wood, county engineer. Orig. scale: I in. to I mi. Includes Columbus and area NE to steens. Extent: 12 mi. East-West, 9 mi. North-South. Property of Helen (Mrs. Sam L.) Crawford, Hamilton, Ms. Sarcone Photography, Columbus, Ms., Sep 1978. - Bridges of the Upper Tombigbee River Valley, Columbus, Lowndes County, MS

  8. Application of automated multispectral analysis to Delaware's coastal vegetation mapping

    NASA Technical Reports Server (NTRS)

    Klemas, V.; Daiber, F.; Bartlett, D.; Crichton, O.; Fornes, A.

    1973-01-01

    A baseline mapping project was undertaken in Delaware's coastal wetlands as a prelude to an evaluation of the relative value of different parcels of marsh and the setting of priorities for use of these marshes. A description of Delaware's wetlands is given and a mapping approach is discussed together with details concerning an automated analysis. The precision and resolution of the analysis was limited primarily by the quality of the imagery used.

  9. Developing a 30-m grassland productivity estimation map for central Nebraska using 250-m MODIS and 30-m Landsat-8 observations

    USGS Publications Warehouse

    Gu, Yingxin; Wylie, Bruce K.

    2015-01-01

    Accurately estimating aboveground vegetation biomass productivity is essential for local ecosystem assessment and best land management practice. Satellite-derived growing season time-integrated Normalized Difference Vegetation Index (GSN) has been used as a proxy for vegetation biomass productivity. A 250-m grassland biomass productivity map for the Greater Platte River Basin had been developed based on the relationship between Moderate Resolution Imaging Spectroradiometer (MODIS) GSN and Soil Survey Geographic (SSURGO) annual grassland productivity. However, the 250-m MODIS grassland biomass productivity map does not capture detailed ecological features (or patterns) and may result in only generalized estimation of the regional total productivity. Developing a high or moderate spatial resolution (e.g., 30-m) productivity map to better understand the regional detailed vegetation condition and ecosystem services is preferred. The 30-m Landsat data provide spatial detail for characterizing human-scale processes and have been successfully used for land cover and land change studies. The main goal of this study is to develop a 30-m grassland biomass productivity estimation map for central Nebraska, leveraging 250-m MODIS GSN and 30-m Landsat data. A rule-based piecewise regression GSN model based on MODIS and Landsat (r = 0.91) was developed, and a 30-m MODIS equivalent GSN map was generated. Finally, a 30-m grassland biomass productivity estimation map, which provides spatially detailed ecological features and conditions for central Nebraska, was produced. The resulting 30-m grassland productivity map was generally supported by the SSURGO biomass production map and will be useful for regional ecosystem study and local land management practices.

  10. The ACS Exams Institute Undergraduate Chemistry Anchoring Concepts Content Map II: Organic Chemistry

    ERIC Educational Resources Information Center

    Raker, Jeffrey; Holme, Thomas; Murphy, Kristen

    2013-01-01

    As a way to assist chemistry departments with programmatic assessment of undergraduate chemistry curricula, the ACS Examinations Institute is devising a map of the content taught throughout the undergraduate curriculum. The structure of the map is hierarchal, with large grain size at the top and more content detail as one moves "down"…

  11. CAFÉ-Map: Context Aware Feature Mapping for mining high dimensional biomedical data.

    PubMed

    Minhas, Fayyaz Ul Amir Afsar; Asif, Amina; Arif, Muhammad

    2016-12-01

    Feature selection and ranking is of great importance in the analysis of biomedical data. In addition to reducing the number of features used in classification or other machine learning tasks, it allows us to extract meaningful biological and medical information from a machine learning model. Most existing approaches in this domain do not directly model the fact that the relative importance of features can be different in different regions of the feature space. In this work, we present a context aware feature ranking algorithm called CAFÉ-Map. CAFÉ-Map is a locally linear feature ranking framework that allows recognition of important features in any given region of the feature space or for any individual example. This allows for simultaneous classification and feature ranking in an interpretable manner. We have benchmarked CAFÉ-Map on a number of toy and real world biomedical data sets. Our comparative study with a number of published methods shows that CAFÉ-Map achieves better accuracies on these data sets. The top ranking features obtained through CAFÉ-Map in a gene profiling study correlate very well with the importance of different genes reported in the literature. Furthermore, CAFÉ-Map provides a more in-depth analysis of feature ranking at the level of individual examples. CAFÉ-Map Python code is available at: http://faculty.pieas.edu.pk/fayyaz/software.html#cafemap . The CAFÉ-Map package supports parallelization and sparse data and provides example scripts for classification. This code can be used to reconstruct the results given in this paper. Copyright © 2016 Elsevier Ltd. All rights reserved.

  12. Self-organizing map (SOM) of space acceleration measurement system (SAMS) data.

    PubMed

    Sinha, A; Smith, A D

    1999-01-01

    In this paper, space acceleration measurement system (SAMS) data have been classified using self-organizing map (SOM) networks without any supervision; i.e., no a priori knowledge is assumed regarding input patterns belonging to a certain class. Input patterns are created on the basis of power spectral densities of SAMS data. Results for SAMS data from STS-50 and STS-57 missions are presented. Following issues are discussed in details: impact of number of neurons, global ordering of SOM weight vectors, effectiveness of a SOM in data classification, and effects of shifting time windows in the generation of input patterns. The concept of 'cascade of SOM networks' is also developed and tested. It has been found that a SOM network can successfully classify SAMS data obtained during STS-50 and STS-57 missions.

  13. A Multi-Resolution Nonlinear Mapping Technique for Design and Analysis Applications

    NASA Technical Reports Server (NTRS)

    Phan, Minh Q.

    1998-01-01

    This report describes a nonlinear mapping technique where the unknown static or dynamic system is approximated by a sum of dimensionally increasing functions (one-dimensional curves, two-dimensional surfaces, etc.). These lower dimensional functions are synthesized from a set of multi-resolution basis functions, where the resolutions specify the level of details at which the nonlinear system is approximated. The basis functions also cause the parameter estimation step to become linear. This feature is taken advantage of to derive a systematic procedure to determine and eliminate basis functions that are less significant for the particular system under identification. The number of unknown parameters that must be estimated is thus reduced and compact models obtained. The lower dimensional functions (identified curves and surfaces) permit a kind of "visualization" into the complexity of the nonlinearity itself.

  14. Self-organizing map (SOM) of space acceleration measurement system (SAMS) data

    NASA Technical Reports Server (NTRS)

    Sinha, A.; Smith, A. D.

    1999-01-01

    In this paper, space acceleration measurement system (SAMS) data have been classified using self-organizing map (SOM) networks without any supervision; i.e., no a priori knowledge is assumed regarding input patterns belonging to a certain class. Input patterns are created on the basis of power spectral densities of SAMS data. Results for SAMS data from STS-50 and STS-57 missions are presented. Following issues are discussed in details: impact of number of neurons, global ordering of SOM weight vectors, effectiveness of a SOM in data classification, and effects of shifting time windows in the generation of input patterns. The concept of 'cascade of SOM networks' is also developed and tested. It has been found that a SOM network can successfully classify SAMS data obtained during STS-50 and STS-57 missions.

  15. A Multi-Resolution Nonlinear Mapping Technique for Design and Analysis Application

    NASA Technical Reports Server (NTRS)

    Phan, Minh Q.

    1997-01-01

    This report describes a nonlinear mapping technique where the unknown static or dynamic system is approximated by a sum of dimensionally increasing functions (one-dimensional curves, two-dimensional surfaces, etc.). These lower dimensional functions are synthesized from a set of multi-resolution basis functions, where the resolutions specify the level of details at which the nonlinear system is approximated. The basis functions also cause the parameter estimation step to become linear. This feature is taken advantage of to derive a systematic procedure to determine and eliminate basis functions that are less significant for the particular system under identification. The number of unknown parameters that must be estimated is thus reduced and compact models obtained. The lower dimensional functions (identified curves and surfaces) permit a kind of "visualization" into the complexity of the nonlinearity itself.

  16. Determining minimal display element requirements for surface map displays

    DOT National Transportation Integrated Search

    2003-04-14

    There is a great deal of interest in developing electronic surface map displays to enhance safety and reduce incidents and incursions on or near the airport surface. There is a lack of research, however, detailing the minimal display elements require...

  17. Preliminary Geologic Map of the Mount Hood 30- by 60-minute Quadrangle, Northern Cascade Range, Oregon

    USGS Publications Warehouse

    Sherrod, David R.; Scott, William E.

    1995-01-01

    This map shows the geology of the central and eastern parts of the Cascade Range in northern Oregon. The Quaternary andesitic stratovolcano of Mount Hood dominates the northwest quarter of the quadrangle, but nearly the entire area is underlain by arc-related volcanic and volcaniclastic rocks of the Cascade Range. Most stratigraphic units were emplaced since middle Miocene time, and all are Oligocene or younger. Despite the proximity of the map area to the Portland metropolitan area, large parts remained virtually unstudied or known only from limited reconnaissance until the late 1970s. A notable exception is the area surrounding Mount Hood, where mapping and chemical analyses by Wise (1969) provided a framework for geologic interpretation. Mapping since 1975 was conducted first to understand the stratigraphy and structure of the Columbia River Basalt Group (Anderson, 1978; Vogt, 1981; J.L. Anderson, in Swanson and others, 1981; Vandiver-Powell, 1978; Burck, 1986) and later to examine the geothermal potential of Mount Hood (Priest and others, 1982). Additional mapping was completed in 1985 for a geologic map of the Cascade Range in Oregon (Sherrod and Smith, 1989). From 1987 to 1990, detailed mapping was conducted in three 15-minute quadrangles on a limited basis (D.R. Sherrod, unpublished mapping) (see fig. 1 for index to mapping). An ongoing volcanic hazards study of Mount Hood by the U.S. Geological Survey (Scott and others, 1994) has provided the catalyst for completing the geologic map of the Mount Hood 30-minute by 60-minute quadrangle. As of June 1994, only two broad areas still remain largely unmapped. One of these areas, labeled 'unmapped' on the geologic map, lies in the Salmon River valley south of Zigzag along the west margin of the quadrangle. Although strata of the Columbia River Basalt Group in the Salmon River valley were mapped in detail by Burck (1986), the overlying middle and upper(?) Miocene lava flows, volcaniclastic strata, and intrusions

  18. Unfolding Leonardo DA Vinci's Globe (ad 1504) to Reveal its Historical World Map

    NASA Astrophysics Data System (ADS)

    Verhoeven, G. J.; Missinne, S. J.

    2017-08-01

    This paper reports in detail on the image-based modelling and unwrapping approach used to create a two-dimensional projected map of an astonishing ostrich egg globe from AD 1504. This miniature egg globe is not only the oldest extant engraved globe, but it is also the oldest post-Columbian globe of the world and the first ever to depict Newfoundland and many other territories. The intention of digitally recording the surface geometry and colour of this unique artefact was to portray the original layout of the world map used by the Florentine Renaissance artist to make this globe. In addition, it was expected to substantiate iconographical details, which are hard to study at its scale of 1:80,000,000. The ostrich egg globe is the prototype of the Lenox Globe kept at the New York Public Library. The latter is very beneficial to examine how the egg globe looked like before being glued together at its equator. On the other hand, unfolding the map engraved in the ostrich egg halves enables a more detailed study of the remarkable details visible on both globes, since the engravings on the quasi-white egg surface are much easier to discern than those of the highly reflective red copper Lenox Globe. Finally, a detailed study of the unwrapped 3D surface is essential to learn more about the world vision of its creator and the incredible efforts that went into making this globe. Thanks to some particular pictographic details as well as the way in which the engravings are applied (by a left-handed person), the globe artist can be identified as Leonardo da Vinci.

  19. Speech processing using maximum likelihood continuity mapping

    DOEpatents

    Hogden, John E.

    2000-01-01

    Speech processing is obtained that, given a probabilistic mapping between static speech sounds and pseudo-articulator positions, allows sequences of speech sounds to be mapped to smooth sequences of pseudo-articulator positions. In addition, a method for learning a probabilistic mapping between static speech sounds and pseudo-articulator position is described. The method for learning the mapping between static speech sounds and pseudo-articulator position uses a set of training data composed only of speech sounds. The said speech processing can be applied to various speech analysis tasks, including speech recognition, speaker recognition, speech coding, speech synthesis, and voice mimicry.

  20. Speech processing using maximum likelihood continuity mapping

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hogden, J.E.

    Speech processing is obtained that, given a probabilistic mapping between static speech sounds and pseudo-articulator positions, allows sequences of speech sounds to be mapped to smooth sequences of pseudo-articulator positions. In addition, a method for learning a probabilistic mapping between static speech sounds and pseudo-articulator position is described. The method for learning the mapping between static speech sounds and pseudo-articulator position uses a set of training data composed only of speech sounds. The said speech processing can be applied to various speech analysis tasks, including speech recognition, speaker recognition, speech coding, speech synthesis, and voice mimicry.

  1. Geologic map of the Chewelah 30' x 60' Quadrangle, Washington and Idaho

    USGS Publications Warehouse

    Miller, F.K.

    2001-01-01

    This data set maps and describes the geology of the Chewelah 30' X 60' quadrangle, Washington and Idaho. Created using Environmental Systems Research Institute's ARC/INFO software, the data base consists of the following items: (1) a map coverage containing geologic contacts and units, (2) a point coverage containing site-specific geologic structural data, (3) two coverages derived from 1:100,000 Digital Line Graphs (DLG); one of which represents topographic data, and the other, cultural data, (4) two line coverages that contain cross-section lines and unit-label leaders, respectively, and (5) attribute tables for geologic units (polygons), contacts (arcs), and site-specific data (points). In addition, the data set includes the following graphic and text products: (1) A PostScript graphic plot-file containing the geologic map, topography, cultural data, and two cross sections, and on a separate sheet, a Correlation of Map Units (CMU) diagram, an abbreviated Description of Map Units (DMU), modal diagrams for granitic rocks, an index map, a regional geologic and structure map, and a key for point and line symbols; (2) PDF files of the Readme text-file and expanded Description of Map Units (DMU), and (3) this metadata file. The geologic map database contains original U.S. Geological Survey data generated by detailed field observation and by interpretation of aerial photographs. The map was compiled from geologic maps of eight 1:48,000 15' quadrangle blocks, each of which was made by mosaicing and reducing the four constituent 7.5' quadrangles. These 15' quadrangle blocks were mapped chiefly at 1:24,000 scale, but the detail of the mapping was governed by the intention that it was to be compiled at 1:48,000 scale. The compilation at 1:100,000 scale entailed necessary simplification in some areas and combining of some geologic units. Overall, however, despite a greater than two times reduction in scale, most geologic detail found on the 1:48,000 maps is retained on the

  2. Classifying the Diversity of Bus Mapping Systems

    NASA Astrophysics Data System (ADS)

    Said, Mohd Shahmy Mohd; Forrest, David

    2018-05-01

    This study represents the first stage of an investigation into understanding the nature of different approaches to mapping bus routes and bus network, and how they may best be applied in different public transport situations. In many cities, bus services represent an important facet of easing traffic congestion and reducing pollution. However, with the entrenched car culture in many countries, persuading people to change their mode of transport is a major challenge. To promote this modal shift, people need to know what services are available and where (and when) they go. Bus service maps provide an invaluable element of providing suitable public transport information, but are often overlooked by transport planners, and are under-researched by cartographers. The method here consists of the creation of a map evaluation form and performing assessment of published bus networks maps. The analyses were completed by a combination of quantitative and qualitative data analysis of various aspects of cartographic design and classification. This paper focuses on the resulting classification, which is illustrated by a series of examples. This classification will facilitate more in depth investigations into the details of cartographic design for such maps and help direct areas for user evaluation.

  3. Mapping soil texture targeting predefined depth range or synthetizing from standard layers?

    NASA Astrophysics Data System (ADS)

    Laborczi, Annamária; Dezső Kaposi, András; Szatmári, Gábor; Takács, Katalin; Pásztor, László

    2017-04-01

    There are increasing demands nowadays on spatial soil information in order to support environmental related and land use management decisions. Physical soil properties, especially particle size distribution play important role in this context. A few of the requirements can be satisfied by the sand-, silt-, and clay content maps compiled according to global standards such as GlobalSoilMap (GSM) or Soil Grids. Soil texture classes (e. g. according to USDA classification) can be derived from these three fraction data, in this way texture map can be compiled based on the proper separate maps. Soil texture class as well as fraction information represent direct input of crop-, meteorological- and hydrological models. The model inputs frequently require maps representing soil features of 0-30 cm depth, which is covered by three consecutive depth intervals according to standard specifications: 0-5 cm, 5-15 cm, 15-30 cm. Becoming GSM and SoilGrids the most detailed freely available spatial soil data sources, the common model users (e. g. meteorologists, agronomists, or hydrologists) would produce input map from (the weighted mean of) these three layers. However, if the basic soil data and proper knowledge is obtainable, a soil texture map targeting directly the 0-30 cm layer could be independently compiled. In our work we compared Hungary's soil texture maps compiled using the same reference and auxiliary data and inference methods but for differing layer distribution. We produced the 0-30 cm clay, silt and sand map as well as the maps for the three standard layers (0-5 cm, 5-15 cm, 15-30 cm). Maps of sand, silt and clay percentage were computed through regression kriging (RK) applying Additive Log-Ratio (alr) transformation. In addition to the Hungarian Soil Information and Monitoring System as reference soil data, digital elevation model and its derived components, soil physical property maps, remotely sensed images, land use -, geological-, as well as meteorological data

  4. Decoding 2D-PAGE complex maps: relevance to proteomics.

    PubMed

    Pietrogrande, Maria Chiara; Marchetti, Nicola; Dondi, Francesco; Righetti, Pier Giorgio

    2006-03-20

    This review describes two mathematical approaches useful for decoding the complex signal of 2D-PAGE maps of protein mixtures. These methods are helpful for interpreting the large amount of data of each 2D-PAGE map by extracting all the analytical information hidden therein by spot overlapping. Here the basic theory and application to 2D-PAGE maps are reviewed: the means for extracting information from the experimental data and their relevance to proteomics are discussed. One method is based on the quantitative theory of statistical model of peak overlapping (SMO) using the spot experimental data (intensity and spatial coordinates). The second method is based on the study of the 2D-autocovariance function (2D-ACVF) computed on the experimental digitised map. They are two independent methods that are able to extract equal and complementary information from the 2D-PAGE map. Both methods permit to obtain fundamental information on the sample complexity and the separation performance and to single out ordered patterns present in spot positions: the availability of two independent procedures to compute the same separation parameters is a powerful tool to estimate the reliability of the obtained results. The SMO procedure is an unique tool to quantitatively estimate the degree of spot overlapping present in the map, while the 2D-ACVF method is particularly powerful in simply singling out the presence of order in the spot position from the complexity of the whole 2D map, i.e., spot trains. The procedures were validated by extensive numerical computation on computer-generated maps describing experimental 2D-PAGE gels of protein mixtures. Their applicability to real samples was tested on reference maps obtained from literature sources. The review describes the most relevant information for proteomics: sample complexity, separation performance, overlapping extent, identification of spot trains related to post-translational modifications (PTMs).

  5. Mars Global Geologic Mapping Progress and Suggested Geographic-Based Hierarchal Systems for Unit Grouping and Naming

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Dohm, J. M.; Irwin, R.; Kolb, E. J.; Skinner, J. A., Jr.; Hare, T. M.

    2010-01-01

    We are in the fourth year of a fiveyear effort to map the global geology of Mars at 1:20M scale using mainly Mars Global Surveyor, Mars Express, and Mars Odyssey image and altimetry datasets. Previously, we reported on details of project management, mapping datasets (local and regional), initial and anticipated mapping approaches, and tactics of map unit delineation and description [1-2]. Last year, we described mapping and unit delineation results thus far, a new unit identified in the northern plains, and remaining steps to complete the map [3].

  6. Diversity arrays technology (DArT) markers in apple for genetic linkage maps.

    PubMed

    Schouten, Henk J; van de Weg, W Eric; Carling, Jason; Khan, Sabaz Ali; McKay, Steven J; van Kaauwen, Martijn P W; Wittenberg, Alexander H J; Koehorst-van Putten, Herma J J; Noordijk, Yolanda; Gao, Zhongshan; Rees, D Jasper G; Van Dyk, Maria M; Jaccoud, Damian; Considine, Michael J; Kilian, Andrzej

    2012-03-01

    Diversity Arrays Technology (DArT) provides a high-throughput whole-genome genotyping platform for the detection and scoring of hundreds of polymorphic loci without any need for prior sequence information. The work presented here details the development and performance of a DArT genotyping array for apple. This is the first paper on DArT in horticultural trees. Genetic mapping of DArT markers in two mapping populations and their integration with other marker types showed that DArT is a powerful high-throughput method for obtaining accurate and reproducible marker data, despite the low cost per data point. This method appears to be suitable for aligning the genetic maps of different segregating populations. The standard complexity reduction method, based on the methylation-sensitive PstI restriction enzyme, resulted in a high frequency of markers, although there was 52-54% redundancy due to the repeated sampling of highly similar sequences. Sequencing of the marker clones showed that they are significantly enriched for low-copy, genic regions. The genome coverage using the standard method was 55-76%. For improved genome coverage, an alternative complexity reduction method was examined, which resulted in less redundancy and additional segregating markers. The DArT markers proved to be of high quality and were very suitable for genetic mapping at low cost for the apple, providing moderate genome coverage. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11032-011-9579-5) contains supplementary material, which is available to authorized users.

  7. Criteria for the optimal selection of remote sensing optical images to map event landslides

    NASA Astrophysics Data System (ADS)

    Fiorucci, Federica; Giordan, Daniele; Santangelo, Michele; Dutto, Furio; Rossi, Mauro; Guzzetti, Fausto

    2018-01-01

    Landslides leave discernible signs on the land surface, most of which can be captured in remote sensing images. Trained geomorphologists analyse remote sensing images and map landslides through heuristic interpretation of photographic and morphological characteristics. Despite a wide use of remote sensing images for landslide mapping, no attempt to evaluate how the image characteristics influence landslide identification and mapping exists. This paper presents an experiment to determine the effects of optical image characteristics, such as spatial resolution, spectral content and image type (monoscopic or stereoscopic), on landslide mapping. We considered eight maps of the same landslide in central Italy: (i) six maps obtained through expert heuristic visual interpretation of remote sensing images, (ii) one map through a reconnaissance field survey, and (iii) one map obtained through a real-time kinematic (RTK) differential global positioning system (dGPS) survey, which served as a benchmark. The eight maps were compared pairwise and to a benchmark. The mismatch between each map pair was quantified by the error index, E. Results show that the map closest to the benchmark delineation of the landslide was obtained using the higher resolution image, where the landslide signature was primarily photographical (in the landslide source and transport area). Conversely, where the landslide signature was mainly morphological (in the landslide deposit) the best mapping result was obtained using the stereoscopic images. Albeit conducted on a single landslide, the experiment results are general, and provide useful information to decide on the optimal imagery for the production of event, seasonal and multi-temporal landslide inventory maps.

  8. Absolute continuity for operator valued completely positive maps on C∗-algebras

    NASA Astrophysics Data System (ADS)

    Gheondea, Aurelian; Kavruk, Ali Şamil

    2009-02-01

    Motivated by applicability to quantum operations, quantum information, and quantum probability, we investigate the notion of absolute continuity for operator valued completely positive maps on C∗-algebras, previously introduced by Parthasarathy [in Athens Conference on Applied Probability and Time Series Analysis I (Springer-Verlag, Berlin, 1996), pp. 34-54]. We obtain an intrinsic definition of absolute continuity, we show that the Lebesgue decomposition defined by Parthasarathy is the maximal one among all other Lebesgue-type decompositions and that this maximal Lebesgue decomposition does not depend on the jointly dominating completely positive map, we obtain more flexible formulas for calculating the maximal Lebesgue decomposition, and we point out the nonuniqueness of the Lebesgue decomposition as well as a sufficient condition for uniqueness. In addition, we consider Radon-Nikodym derivatives for absolutely continuous completely positive maps that, in general, are unbounded positive self-adjoint operators affiliated to a certain von Neumann algebra, and we obtain a spectral approximation by bounded Radon-Nikodym derivatives. An application to the existence of the infimum of two completely positive maps is indicated, and formulas in terms of Choi's matrices for the Lebesgue decomposition of completely positive maps in matrix algebras are obtained.

  9. Spatially Detailed Porosity Prediction From Airborne Electromagnetics and Sparse Borehole Fluid Sampling

    NASA Astrophysics Data System (ADS)

    Macnae, J.; Ley-Cooper, Y.

    2009-05-01

    Sub-surface porosity is of importance in estimating fluid contant and salt-load parameters for hydrological modelling. While sparse boreholes may adequately sample the depth to a sub-horizontal water-table and usually also adequately sample ground-water salinity, they do not provide adequate sampling of the spatial variations in porosity or hydraulic permeability caused by spatial variations in sedimentary and other geological processes.. We show in this presentation that spatially detailed porosity can be estimated by applying Archie's law to conductivity estimates from airborne electromagnetic surveys with interpolated ground-water conductivity values. The prediction was tested on data from the Chowilla flood plain in the Murray-Darling Basin of South Australia. A frequency domain, helicopter-borne electromagnetic system collected data at 6 frequencies and 3 to 4 m spacings on lines spaced 100 m apart. This data was transformed into conductivity-depth sections, from which a 3D bulk-conductivity map could be created with about 30 m spatial resolution and 2 to 5 m vertical depth resolution. For that portion of the volume below the interpolated water-table, we predicted porosity in each cell using Archie's law. Generally, predicted porosities were in the 30 to 50 % range, consistent with expectations for the partially consolidated sediments in the floodplain. Porosities were directly measured on core from eight boreholes in the area, and compared quite well with the predictions. The predicted porosity map was spatially consistent, and when combined with measured salinities in the ground water, was able to provide a detailed 3D map of salt-loads in the saturated zone, and as such contribute to a hazard assessment of the saline threat to the river.

  10. Projection Mapping User Interface for Disabled People

    PubMed Central

    Simutis, Rimvydas; Maskeliūnas, Rytis

    2018-01-01

    Difficulty in communicating is one of the key challenges for people suffering from severe motor and speech disabilities. Often such person can communicate and interact with the environment only using assistive technologies. This paper presents a multifunctional user interface designed to improve communication efficiency and person independence. The main component of this interface is a projection mapping technique used to highlight objects in the environment. Projection mapping makes it possible to create a natural augmented reality information presentation method. The user interface combines a depth sensor and a projector to create camera-projector system. We provide a detailed description of camera-projector system calibration procedure. The described system performs tabletop object detection and automatic projection mapping. Multiple user input modalities have been integrated into the multifunctional user interface. Such system can be adapted to the needs of people with various disabilities. PMID:29686827

  11. Projection Mapping User Interface for Disabled People.

    PubMed

    Gelšvartas, Julius; Simutis, Rimvydas; Maskeliūnas, Rytis

    2018-01-01

    Difficulty in communicating is one of the key challenges for people suffering from severe motor and speech disabilities. Often such person can communicate and interact with the environment only using assistive technologies. This paper presents a multifunctional user interface designed to improve communication efficiency and person independence. The main component of this interface is a projection mapping technique used to highlight objects in the environment. Projection mapping makes it possible to create a natural augmented reality information presentation method. The user interface combines a depth sensor and a projector to create camera-projector system. We provide a detailed description of camera-projector system calibration procedure. The described system performs tabletop object detection and automatic projection mapping. Multiple user input modalities have been integrated into the multifunctional user interface. Such system can be adapted to the needs of people with various disabilities.

  12. A Fire Severity Mapping System (FSMS) for real-time management applications and long term planning: Developing a map of the landscape potential for severe fire in the western United States

    Treesearch

    Gregory K. Dillon; Zachary A. Holden; Penny Morgan; Bob Keane

    2009-01-01

    The Fire Severity Mapping System project is geared toward providing fire managers across the western United States with critical information for dealing with and planning for the ecological effects of wildfire at multiple levels of thematic, spatial, and temporal detail. For this project, we are developing a comprehensive, west-wide map of the landscape potential for...

  13. Spatial resolution requirements for urban land cover mapping from space

    NASA Technical Reports Server (NTRS)

    Todd, William J.; Wrigley, Robert C.

    1986-01-01

    Very low resolution (VLR) satellite data (Advanced Very High Resolution Radiometer, DMSP Operational Linescan System), low resolution (LR) data (Landsat MSS), medium resolution (MR) data (Landsat TM), and high resolution (HR) satellite data (Spot HRV, Large Format Camera) were evaluated and compared for interpretability at differing spatial resolutions. VLR data (500 m - 1.0 km) is useful for Level 1 (urban/rural distinction) mapping at 1:1,000,000 scale. Feature tone/color is utilized to distinguish generalized urban land cover using LR data (80 m) for 1:250,000 scale mapping. Advancing to MR data (30 m) and 1:100,000 scale mapping, confidence in land cover mapping is greatly increased, owing to the element of texture/pattern which is now evident in the imagery. Shape and shadow contribute to detailed Level II/III urban land use mapping possible if the interpreter can use HR (10-15 m) satellite data; mapping scales can be 1:25,000 - 1:50,000.

  14. Facilitating the exploitation of ERTS-1 imagery using snow enhancement techniques. [geological fault maps of Massachusetts and Connecticut

    NASA Technical Reports Server (NTRS)

    Wobber, F. J. (Principal Investigator); Martin, K. R.; Amato, R. V.; Leshendok, T.

    1973-01-01

    The author has identified the following significant results. The applications of ERTS-1 imagery for geological fracture mapping regardless of season has been repeatedly confirmed. The enhancement provided by a differential cover of snow increases the number and length of fracture-lineaments which can be detected with ERTS-1 data and accelerates the fracture mapping process for a variety of practical applications. The geological mapping benefits of the program will be realized in geographic areas where data are most needed - complex glaciated terrain and areas of deep residual soils. ERTS-1 derived fracture-lineament maps which provide detail well in excess of existing geological maps are not available in the Massachusetts-Connecticut area. The large quantity of new data provided by ERTS-1 may accelerate and improve field mapping now in progress in the area. Numerous other user groups have requested data on the techniques. This represents a major change in operating philosophy for groups who to data judged that snow obscured geological detail.

  15. Digit replacement: A generic map for nonlinear dynamical systems.

    PubMed

    García-Morales, Vladimir

    2016-09-01

    A simple discontinuous map is proposed as a generic model for nonlinear dynamical systems. The orbit of the map admits exact solutions for wide regions in parameter space and the method employed (digit manipulation) allows the mathematical design of useful signals, such as regular or aperiodic oscillations with specific waveforms, the construction of complex attractors with nontrivial properties as well as the coexistence of different basins of attraction in phase space with different qualitative properties. A detailed analysis of the dynamical behavior of the map suggests how the latter can be used in the modeling of complex nonlinear dynamics including, e.g., aperiodic nonchaotic attractors and the hierarchical deposition of grains of different sizes on a surface.

  16. Mapping Pluto Broken Heart

    NASA Image and Video Library

    2015-10-29

    In addition to transmitting new high-resolution images and other data on the familiar close-approach hemispheres of Pluto and Charon, NASA's New Horizons spacecraft is also returning images -- such as this one -- to improve maps of other regions. This image was taken by the New Horizons Long Range Reconnaissance Imager (LORRI) on the morning of July 13, 2015, from a range of 1.03 million miles (1.7 million kilometers) and has a resolution of 5.1 miles (8.3 kilometers) per pixel. It provides fascinating new details to help the science team map the informally named Krun Macula (the prominent dark spot at the bottom of the image) and the complex terrain east and northeast of Pluto's "heart" (Tombaugh Regio). Pluto's north pole is on the planet's disk at the 12 o'clock position of this image. http://photojournal.jpl.nasa.gov/catalog/PIA20037

  17. Fifty-Year Flood-Inundation Maps for Santa Rosa de Aguan, Honduras

    USGS Publications Warehouse

    Mastin, Mark C.; Olsen, T.D.

    2002-01-01

    After the devastating floods caused by Hurricane Mitch in 1998, maps of the areas and depths of the 50-year-flood inundation at 15 municipalities in Honduras were prepared as a tool for agencies involved in reconstruction and planning. This report, which is one in a series of 15, presents maps of areas in the coastal municipality of Santa Rosa de Aguan that are prone to oceanic storm-surge flooding and wave action. The 50-year flood on the Rio Aguan (4,270 cubic meters per second), would inundate most of the area surveyed for this municipality and beyond. Therefore a detailed numerical hydraulic model was not developed for this municipality as it was for the others. The 50-year storm surge would likely produce higher water levels than the 50-year flood on the river during normal astronomical tides. The elevation of the 50-year storm surge was estimated to be 4.35 meters above normal sea level, based on hurricane probabilities and published storm-surge elevations associated with various hurricane categories. Flood-inundation maps, including areas of wave-action hazard and a color-shaded elevation map, were created from the available data and the estimated 50-year storm tide. Geographic Information System (GIS) coverages of the hazard areas are available on a computer in the municipality of Santa Rosa de Aguan as part of the Municipal GIS project and on the Internet at the Flood Hazard Mapping Data Web page (http://mitchnts1.cr.usgs.gov/projects/floodhazard.html). These coverages allow users to view the maps in much more detail than is possible using the maps in this report.

  18. Obtaining land cover changes information from multitemporal analysis of Landsat-TM images: results from a case study in West African dryland

    NASA Astrophysics Data System (ADS)

    Nutini, F.; Boschetti, M.; Brivio, P. A.; Antoninetti, M.

    2012-04-01

    The Sahelian belt of West Africa is a semiarid region characterized by wide climate variations, which can in turn affect the livelihood of local populations particularly in rangeland areas, as happens during the dramatic food crisis in the 70-80s caused by rainfall scarcity. The monitoring of natural resources and rainfed agricultural activities, with the aim to provide information to support Sahelian food security action, needs the production of detailed thematic maps as emphasized by several scientific papers. In this framework, a study was conducted to develop a method to exploit time series of remote sensed satellite data to 1) provide reliable land cover (LC) map at local scale in a dry region and 2) obtain a LC change (LCC) map that contribute to identify the plausible causes of local environmental instability. Satellite images used for this work consist in a time series of Landsat Thematic Mapper (TM) (path row 195-50) acquired in the 2000 (6 scenes) and 2007 (9 scenes) from February (Dry season) to September (end of wet season). The study investigates the different contribution provided by spectra information of a single Landsat TM image and by time series of derived NDVI. Different tests have been conducted with different combination of data set (spectral and temporal)in order to identify the best approach to obtain a LC map in five classes of interest: Shrubland, Cultivated Land, Water body, Herbaceous vegetation and Bare soil. The best classification approach is exposed and applied on two years in the last decade. The comparison between this two LC results in land cover change map, that displays the changes of vegetation patterns that have been characterized the area. The discussed results show a largely stable dryland region, but locally characterized by hot-spot of decreasing in natural vegetation inside the rangelands and an increasing of cultivations along fossil valleys where human activities are slightly intense. The discussion shows that this hot

  19. Seeing the trees for the forest: mapping vegetation biodiversity in coastal Oregon forests.

    Treesearch

    Sally. Duncan

    2003-01-01

    In order to address policy issues relating to biodiversity, productivity, and sustainability, we need detailed understanding of forest vegetation at broad geographic and time scales. Most existing maps developed from satellite imagery describe only general characteristics of the upper canopy. Detailed vegetation data are available from regional grids of field plots,...

  20. Web Image Retrieval Using Self-Organizing Feature Map.

    ERIC Educational Resources Information Center

    Wu, Qishi; Iyengar, S. Sitharama; Zhu, Mengxia

    2001-01-01

    Provides an overview of current image retrieval systems. Describes the architecture of the SOFM (Self Organizing Feature Maps) based image retrieval system, discussing the system architecture and features. Introduces the Kohonen model, and describes the implementation details of SOFM computation and its learning algorithm. Presents a test example…

  1. Detailed mechanism for oxidation of benzene

    NASA Technical Reports Server (NTRS)

    Bittker, David A.

    1990-01-01

    A detailed mechanism for the oxidation of benzene is presented and used to compute experimentally obtained concentration profiles and ignition delay times over a wide range of equivalence ratio and temperature. The computed results agree qualitatively with all the experimental trends. Quantitative agreement is obtained with several of the composition profiles and for the temperature dependence of the ignition delay times. There are indications, however, that some important reactions are as yet undiscovered in this mechanism. Recent literature expressions have been used for the rate coefficients of most important reactions, except for some involving phenol. The discrepancy between the phenol pyrolysis rate coefficient used in this work and a recent literature expression remains to be explained.

  2. Using electrical impedance tomography to map subsurface hydraulic conductivity

    DOEpatents

    Berryman, James G.; Daily, William D.; Ramirez, Abelardo L.; Roberts, Jeffery J.

    2000-01-01

    The use of Electrical Impedance Tomography (EIT) to map subsurface hydraulic conductivity. EIT can be used to map hydraulic conductivity in the subsurface where measurements of both amplitude and phase are made. Hydraulic conductivity depends on at least two parameters: porosity and a length scale parameter. Electrical Resistance Tomography (ERT) measures and maps electrical conductivity (which can be related to porosity) in three dimensions. By introducing phase measurements along with amplitude, the desired additional measurement of a pertinent length scale can be achieved. Hydraulic conductivity controls the ability to flush unwanted fluid contaminants from the surface. Thus inexpensive maps of hydraulic conductivity would improve planning strategies for subsequent remediation efforts. Fluid permeability is also of importance for oil field exploitation and thus detailed knowledge of fluid permeability distribution in three-dimension (3-D) would be a great boon to petroleum reservoir analysts.

  3. From blood oxygenation level dependent (BOLD) signals to brain temperature maps.

    PubMed

    Sotero, Roberto C; Iturria-Medina, Yasser

    2011-11-01

    A theoretical framework is presented for converting Blood Oxygenation Level Dependent (BOLD) images to brain temperature maps, based on the idea that disproportional local changes in cerebral blood flow (CBF) as compared with cerebral metabolic rate of oxygen consumption (CMRO₂) during functional brain activity, lead to both brain temperature changes and the BOLD effect. Using an oxygen limitation model and a BOLD signal model, we obtain a transcendental equation relating CBF and CMRO₂ changes with the corresponding BOLD signal, which is solved in terms of the Lambert W function. Inserting this result in the dynamic bioheat equation describing the rate of temperature changes in the brain, we obtain a nonautonomous ordinary differential equation that depends on the BOLD response, which is solved numerically for each brain voxel. Temperature maps obtained from a real BOLD dataset registered in an attention to visual motion experiment were calculated, obtaining temperature variations in the range: (-0.15, 0.1) which is consistent with experimental results. The statistical analysis revealed that significant temperature activations have a similar distribution pattern than BOLD activations. An interesting difference was the activation of the precuneus in temperature maps, a region involved in visuospatial processing, an effect that was not observed on BOLD maps. Furthermore, temperature maps were more localized to gray matter regions than the original BOLD maps, showing less activated voxels in white matter and cerebrospinal fluid.

  4. Symmetric Simple Map with Dipole Map for a Single-Null Divertor Tokamak

    NASA Astrophysics Data System (ADS)

    Ali, Halima; Watson, Michael; Punjabi, Alkesh; Boozer, Allen

    1996-11-01

    This investigation focuses on the effects of an externally placed dipole coil on the magnetic topology of a single-null divertor tokamak with a stochastic scrape-off layer using the Method of Maps (Punjabi A, Verma A and Boozer A, Phys Rev Lett), 69, 3322 (1992) and J Plasma Phys, 52, 91 (1994). The unperturbed magnetic topology is represented by the Symmetric Simple Map (Ali H, Watson M, Mayer C, Punjabi A and Boozer A, Bull Am Phys Soc), 40, 1855 (1995). The effect of dipole perturbation is repesented by the Dipole Map (Ali H, Watson M, Punjabi A and Boozer A, Sherwood Mtg), paper 1C20 (1996). A single dipole coil is placed across from the X-point below the last good surface. The strength of the dipole perturbation and the distance of the coil from the last good surface are varied. We observe that the dipole perturbation causes spatially intermittent chaos. This has significant implications for radiative divertor concepts as well for impurity control. We also present the detailed results on the effects of the dipole coil on the properties of the stochastic layer and the footprint of the field lines on the divertor plate. This work is supported by the US DOE OFES.

  5. Terrestrial gamma radiation baseline mapping using ultra low density sampling methods.

    PubMed

    Kleinschmidt, R; Watson, D

    2016-01-01

    Baseline terrestrial gamma radiation maps are indispensable for providing basic reference information that may be used in assessing the impact of a radiation related incident, performing epidemiological studies, remediating land contaminated with radioactive materials, assessment of land use applications and resource prospectivity. For a large land mass, such as Queensland, Australia (over 1.7 million km(2)), it is prohibitively expensive and practically difficult to undertake detailed in-situ radiometric surveys of this scale. It is proposed that an existing, ultra-low density sampling program already undertaken for the purpose of a nationwide soil survey project be utilised to develop a baseline terrestrial gamma radiation map. Geoelement data derived from the National Geochemistry Survey of Australia (NGSA) was used to construct a baseline terrestrial gamma air kerma rate map, delineated by major drainage catchments, for Queensland. Three drainage catchments (sampled at the catchment outlet) spanning low, medium and high radioelement concentrations were selected for validation of the methodology using radiometric techniques including in-situ measurements and soil sampling for high resolution gamma spectrometry, and comparative non-radiometric analysis. A Queensland mean terrestrial air kerma rate, as calculated from the NGSA outlet sediment uranium, thorium and potassium concentrations, of 49 ± 69 nGy h(-1) (n = 311, 3σ 99% confidence level) is proposed as being suitable for use as a generic terrestrial air kerma rate background range. Validation results indicate that catchment outlet measurements are representative of the range of results obtained across the catchment and that the NGSA geoelement data is suitable for calculation and mapping of terrestrial air kerma rate. Crown Copyright © 2015. Published by Elsevier Ltd. All rights reserved.

  6. Mapping Landslides in Lunar Impact Craters Using Chebyshev Polynomials and Dem's

    NASA Astrophysics Data System (ADS)

    Yordanov, V.; Scaioni, M.; Brunetti, M. T.; Melis, M. T.; Zinzi, A.; Giommi, P.

    2016-06-01

    Geological slope failure processes have been observed on the Moon surface for decades, nevertheless a detailed and exhaustive lunar landslide inventory has not been produced yet. For a preliminary survey, WAC images and DEM maps from LROC at 100 m/pixels have been exploited in combination with the criteria applied by Brunetti et al. (2015) to detect the landslides. These criteria are based on the visual analysis of optical images to recognize mass wasting features. In the literature, Chebyshev polynomials have been applied to interpolate crater cross-sections in order to obtain a parametric characterization useful for classification into different morphological shapes. Here a new implementation of Chebyshev polynomial approximation is proposed, taking into account some statistical testing of the results obtained during Least-squares estimation. The presence of landslides in lunar craters is then investigated by analyzing the absolute values off odd coefficients of estimated Chebyshev polynomials. A case study on the Cassini A crater has demonstrated the key-points of the proposed methodology and outlined the required future development to carry out.

  7. a Map Mash-Up Application: Investigation the Temporal Effects of Climate Change on Salt Lake Basin

    NASA Astrophysics Data System (ADS)

    Kirtiloglu, O. S.; Orhan, O.; Ekercin, S.

    2016-06-01

    The main purpose of this paper is to investigate climate change effects that have been occurred at the beginning of the twenty-first century at the Konya Closed Basin (KCB) located in the semi-arid central Anatolian region of Turkey and particularly in Salt Lake region where many major wetlands located in and situated in KCB and to share the analysis results online in a Web Geographical Information System (GIS) environment. 71 Landsat 5-TM, 7-ETM+ and 8-OLI images and meteorological data obtained from 10 meteorological stations have been used at the scope of this work. 56 of Landsat images have been used for extraction of Salt Lake surface area through multi-temporal Landsat imagery collected from 2000 to 2014 in Salt lake basin. 15 of Landsat images have been used to make thematic maps of Normalised Difference Vegetation Index (NDVI) in KCB, and 10 meteorological stations data has been used to generate the Standardized Precipitation Index (SPI), which was used in drought studies. For the purpose of visualizing and sharing the results, a Web GIS-like environment has been established by using Google Maps and its useful data storage and manipulating product Fusion Tables which are all Google's free of charge Web service elements. The infrastructure of web application includes HTML5, CSS3, JavaScript, Google Maps API V3 and Google Fusion Tables API technologies. These technologies make it possible to make effective "Map Mash-Ups" involving an embedded Google Map in a Web page, storing the spatial or tabular data in Fusion Tables and add this data as a map layer on embedded map. The analysing process and map mash-up application have been discussed in detail as the main sections of this paper.

  8. Covariance and correlation estimation in electron-density maps.

    PubMed

    Altomare, Angela; Cuocci, Corrado; Giacovazzo, Carmelo; Moliterni, Anna; Rizzi, Rosanna

    2012-03-01

    Quite recently two papers have been published [Giacovazzo & Mazzone (2011). Acta Cryst. A67, 210-218; Giacovazzo et al. (2011). Acta Cryst. A67, 368-382] which calculate the variance in any point of an electron-density map at any stage of the phasing process. The main aim of the papers was to associate a standard deviation to each pixel of the map, in order to obtain a better estimate of the map reliability. This paper deals with the covariance estimate between points of an electron-density map in any space group, centrosymmetric or non-centrosymmetric, no matter the correlation between the model and target structures. The aim is as follows: to verify if the electron density in one point of the map is amplified or depressed as an effect of the electron density in one or more other points of the map. High values of the covariances are usually connected with undesired features of the map. The phases are the primitive random variables of our probabilistic model; the covariance changes with the quality of the model and therefore with the quality of the phases. The conclusive formulas show that the covariance is also influenced by the Patterson map. Uncertainty on measurements may influence the covariance, particularly in the final stages of the structure refinement; a general formula is obtained taking into account both phase and measurement uncertainty, valid at any stage of the crystal structure solution.

  9. Mapping islands, reefs and shoals in the oceans surrounding Australia

    NASA Technical Reports Server (NTRS)

    Turner, L. G. (Principal Investigator)

    1975-01-01

    The author has identified the following significant results. Comparisons of the imagery with aerial photography of areas of reefs and island and with 1:250,000 maps of coastlines indicate that the MSS imagery depicts detail to an extent which is satisfactory for 1:250,000 mapping. As the imagery does not have some of the disadvantages of aerial photography, the former should be valuable for mapping reefs, islands, and shoals. The water discoloration problem is significant as the discolored water appears to occur near shallow depths, so that confusion could arise through the misinterpretation of discolored water, when it exists, as shallow water.

  10. Multi-Baker Map as a Model of Digital PD Control

    NASA Astrophysics Data System (ADS)

    Csernák, Gábor; Gyebrószki, Gergely; Stépán, Gábor

    Digital stabilization of unstable equilibria of linear systems may lead to small amplitude stochastic-like oscillations. We show that these vibrations can be related to a deterministic chaotic dynamics induced by sampling and quantization. A detailed analytical proof of chaos is presented for the case of a PD controlled oscillator: it is shown that there exists a finite attracting domain in the phase-space, the largest Lyapunov exponent is positive and the existence of a Smale horseshoe is also pointed out. The corresponding two-dimensional micro-chaos map is a multi-baker map, i.e. it consists of a finite series of baker’s maps.

  11. Study of the detail content of Apollo orbital photography

    NASA Technical Reports Server (NTRS)

    Kinzly, R. E.

    1972-01-01

    The results achieved during a study of the Detail Content of Apollo Orbital Photography are reported. The effect of residual motion smear or image reproduction processes upon the detail content of lunar surface imagery obtained from the orbiting command module are assessed. Data and conclusions obtained from the Apollo 8, 12, 14 and 15 missions are included. For the Apollo 8, 12 and 14 missions, the bracket-mounted Hasselblad camera had no mechanism internal to the camera for motion compensation. If the motion of the command module were left totally uncompensated, these photographs would exhibit a ground smear varying from 12 to 27 meters depending upon the focal length of the lens and the exposure time. During the photographic sequences motion compensation was attempted by firing the attitude control system of the spacecraft at a rate to compensate for the motion relative to the lunar surface. The residual smear occurring in selected frames of imagery was assessed using edge analyses methods to obtain and achieved modulation transfer function (MTF) which was compared to a baseline MTF.

  12. Planetary Geologic Mapping Handbook - 2009

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Skinner, J. A.; Hare, T. M.

    2009-01-01

    Geologic maps present, in an historical context, fundamental syntheses of interpretations of the materials, landforms, structures, and processes that characterize planetary surfaces and shallow subsurfaces (e.g., Varnes, 1974). Such maps also provide a contextual framework for summarizing and evaluating thematic research for a given region or body. In planetary exploration, for example, geologic maps are used for specialized investigations such as targeting regions of interest for data collection and for characterizing sites for landed missions. Whereas most modern terrestrial geologic maps are constructed from regional views provided by remote sensing data and supplemented in detail by field-based observations and measurements, planetary maps have been largely based on analyses of orbital photography. For planetary bodies in particular, geologic maps commonly represent a snapshot of a surface, because they are based on available information at a time when new data are still being acquired. Thus the field of planetary geologic mapping has been evolving rapidly to embrace the use of new data and modern technology and to accommodate the growing needs of planetary exploration. Planetary geologic maps have been published by the U.S. Geological Survey (USGS) since 1962 (Hackman, 1962). Over this time, numerous maps of several planetary bodies have been prepared at a variety of scales and projections using the best available image and topographic bases. Early geologic map bases commonly consisted of hand-mosaicked photographs or airbrushed shaded-relief views and geologic linework was manually drafted using mylar bases and ink drafting pens. Map publishing required a tedious process of scribing, color peel-coat preparation, typesetting, and photo-laboratory work. Beginning in the 1990s, inexpensive computing, display capability and user-friendly illustration software allowed maps to be drawn using digital tools rather than pen and ink, and mylar bases became obsolete

  13. The synoptic maps of Br from HMI observations

    NASA Astrophysics Data System (ADS)

    Hayashi, Keiji; Hoeksema, J. Todd; Liu, Sun; Yang, Xudong; Centeno, Rebecca; Leka, K. D.; Barnes, Graham

    2012-03-01

    The vector magnetic field measurement can, in principal, give the "true" radial component of the magnetic field. We prepare 4 types of synoptic maps of the radial photospheric magnetic field, from the vector magnetic field data disambiguated by means of the minimum energy method developed at NWRA/CoRA, the vector data determined under the potential-field acute assumption, and the vector data determined under the radial-acute assumption, and the standard line-of-sight magnetogram. The models of the global corona, the MHD and the PFSS, are applied to different types of maps. Although the three-dimensional structures of the global coronal magnetic field with different maps are similar and overall agreeing well the AIA full-disk images, noticeable differences among the model outputs are found especially in the high latitude regions. We will show details of these test maps and discuss the issues in determining the radial component of the photospheric magnetic field near the poles and limb.

  14. SOHO EIT Carrington maps from synoptic full-disk data

    NASA Technical Reports Server (NTRS)

    Thompson, B. J.; Newmark, J. S.; Gurman, J. B.; Delaboudiniere, J. P.; Clette, F.; Gibson, S. E.

    1997-01-01

    The solar synoptic maps, obtained from observations carried out since May 1996 by the extreme-ultraviolet imaging telescope (EIT) onboard the Solar and Heliospheric Observatory (SOHO), are presented. The maps were constructed for each Carrington rotation with the calibrated data. The off-limb maps at 1.05 and 1.10 solar radii were generated for three coronal lines using the standard applied to coronagraph synoptic maps. The maps reveal several aspects of the solar structure over the entire rotation and are used in the whole sun month modeling campaign. @txt extreme-ultraviolet imaging telescope

  15. Cornice Detail of Rake, Cornice Detail of Eave, Wood DoubleHung ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Cornice Detail of Rake, Cornice Detail of Eave, Wood Double-Hung Window Details, Wood Door Details - Boxley Grist Mill, Boxley vicinity on State Route 43, Buffalo National River, Ponca, Newton County, AR

  16. Evidence for human meiotic recombination interference obtained through construction of a short tandem repeat-polymorphism linkage map of chromosome 19

    PubMed Central

    Weber, James L.; Wang, Zhenyuan; Hansen, Kevin; Stephenson, Matt; Kappel, Clarisse; Salzman, Sherry; Wilkie, Patricia J.; Keats, Bronya; Dracopoli, Nicholas C.; Brandriff, Brigitte F.; Olsen, Anne S.

    1993-01-01

    An improved linkage map for human chromosome 19 containing 35 short tandem repeat polymorphisms (STRPs) and one VNTR (D19S20) was constructed. The map included 12 new (GATA)n tetranucleotide STRPs. Although total lengths of the male (114 cM) and female (128 cM) maps were similar, at both ends of the chromosome male recombination exceeded female recombination, while in the interior portion of the map female recombination was in excess. Cosmid clones containing the STRP sequences were identified and were positioned along the chromosome by fluorescent in situ hybridization. Four rounds of careful checking and removal of genotyping errors allowed biologically relevant conclusions to be made concerning the numbers and distributions of recombination events on chromosome 19. The average numbers of recombinations per chromosome matched closely the lengths of the genetic maps computed by using the program CRIMAP. Significant numbers of chromosomes with zero, one, two, or three recombinations were detected as products of both female and male meioses. On the basis of the total number of observed pairs of recombination events in which only a single informative marker was situated between the two recombinations, a maximal estimate for the rate of meiotic STRP “gene” conversion without recombination was calculated as 3 × 10−4/meiosis. For distances up to 30 cM between recombinations, many fewer chromosomes which had undergone exactly two recombinations were observed than were expected on the basis of the assumption of independent recombination locations. This strong new evidence for human meiotic interference will help to improve the accuracy of interpretation of clinical DNA test results involving polymorphisms flanking a genetic abnormality. PMID:8213834

  17. Mapping the Recent US Hurricanes Triggered Flood Events in Near Real Time

    NASA Astrophysics Data System (ADS)

    Shen, X.; Lazin, R.; Anagnostou, E. N.; Wanik, D. W.; Brakenridge, G. R.

    2017-12-01

    Synthetic Aperture Radar (SAR) observations is the only reliable remote sensing data source to map flood inundation during severe weather events. Unfortunately, since state-of-art data processing algorithms cannot meet the automation and quality standard of a near-real-time (NRT) system, quality controlled inundation mapping by SAR currently depends heavily on manual processing, which limits our capability to quickly issue flood inundation maps at global scale. Specifically, most SAR-based inundation mapping algorithms are not fully automated, while those that are automated exhibit severe over- and/or under-detection errors that limit their potential. These detection errors are primarily caused by the strong overlap among the SAR backscattering probability density functions (PDF) of different land cover types. In this study, we tested a newly developed NRT SAR-based inundation mapping system, named Radar Produced Inundation Diary (RAPID), using Sentinel-1 dual polarized SAR data over recent flood events caused by Hurricanes Harvey, Irma, and Maria (2017). The system consists of 1) self-optimized multi-threshold classification, 2) over-detection removal using land-cover information and change detection, 3) under-detection compensation, and 4) machine-learning based correction. Algorithm details are introduced in another poster, H53J-1603. Good agreements were obtained by comparing the result from RAPID with visual interpretation of SAR images and manual processing from Dartmouth Flood Observatory (DFO) (See Figure 1). Specifically, the over- and under-detections that is typically noted in automated methods is significantly reduced to negligible levels. This performance indicates that RAPID can address the automation and accuracy issues of current state-of-art algorithms and has the potential to apply operationally on a number of satellite SAR missions, such as SWOT, ALOS, Sentinel etc. RAPID data can support many applications such as rapid assessment of damage

  18. On the origins of logarithmic number-to-position mapping.

    PubMed

    Dotan, Dror; Dehaene, Stanislas

    2016-11-01

    The number-to-position task, in which children and adults are asked to place numbers on a spatial number line, has become a classic measure of number comprehension. We present a detailed experimental and theoretical dissection of the processing stages that underlie this task. We used a continuous finger-tracking technique, which provides detailed information about the time course of processing stages. When adults map the position of 2-digit numbers onto a line, their final mapping is essentially linear, but intermediate finger location show a transient logarithmic mapping. We identify the origins of this log effect: Small numbers are processed faster than large numbers, so the finger deviates toward the target position earlier for small numbers than for large numbers. When the trajectories are aligned on the finger deviation onset, the log effect disappears. The small-number advantage and the log effect are enhanced in dual-task setting and are further enhanced when the delay between the 2 tasks is shortened, suggesting that these effects originate from a central stage of quantification and decision making. We also report cases of logarithmic mapping-by children and by a brain-injured individual-which cannot be explained by faster responding to small numbers. We show that these findings are captured by an ideal-observer model of the number-to-position mapping task, comprising 3 distinct stages: a quantification stage, whose duration is influenced by both exact and approximate representations of numerical quantity; a Bayesian accumulation-of-evidence stage, leading to a decision about the target location; and a pointing stage. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

  19. Clickstream data yields high-resolution maps of science

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bollen, Johan; Van De Sompel, Herbert; Hagberg, Aric

    2009-01-01

    Intricate maps of science have been created from citation data to visualize the structure of scientific activity. However, most scientific publications are now accessed online. Scholarly web portals record detailed log data at a scale that exceeds the number of all existing citations combined. Such log data is recorded immediately upon publication and keeps track of the sequences of user requests (clickstreams) that are issued by a variety of users across many different domains. Given these advantagees of log datasets over citation data, we investigate whether they can produce high-resolution, more current maps of science.

  20. Mapping and DOWNFLOW simulation of recent lava flow fields at Mount Etna

    NASA Astrophysics Data System (ADS)

    Tarquini, Simone; Favalli, Massimiliano

    2011-07-01

    In recent years, progress in geographic information systems (GIS) and remote sensing techniques have allowed the mapping and studying of lava flows in unprecedented detail. A composite GIS technique is introduced to obtain high resolution boundaries of lava flow fields. This technique is mainly based on the processing of LIDAR-derived maps and digital elevation models (DEMs). The probabilistic code DOWNFLOW is then used to simulate eight large flow fields formed at Mount Etna in the last 25 years. Thanks to the collection of 6 DEMs representing Mount Etna at different times from 1986 to 2007, simulated outputs are obtained by running the DOWNFLOW code over pre-emplacement topographies. Simulation outputs are compared with the boundaries of the actual flow fields obtained here or derived from the existing literature. Although the selected fields formed in accordance with different emplacement mechanisms, flowed on different zones of the volcano over different topographies and were fed by different lava supplies of different durations, DOWNFLOW yields results close to the actual flow fields in all the cases considered. This outcome is noteworthy because DOWNFLOW has been applied by adopting a default calibration, without any specific tuning for the new cases considered here. This extensive testing proves that, if the pre-emplacement topography is available, DOWNFLOW yields a realistic simulation of a future lava flow based solely on a knowledge of the vent position. In comparison with deterministic codes, which require accurate knowledge of a large number of input parameters, DOWNFLOW turns out to be simple, fast and undemanding, proving to be ideal for systematic hazard and risk analyses.

  1. Air transport pilots' information priorities for surface moving maps

    DOT National Transportation Integrated Search

    2003-10-13

    The use of a surface map display for operations on or near the airport surface (taxi out, takeoff, final approach and landing, taxi in) is expected to enhance safety. There is a lack of research, however, detailing how the airport surface should be d...

  2. Digital Data for the reconnaissance geologic map for the Kuskokwim Bay Region of Southwest Alaska

    USGS Publications Warehouse

    Wilson, Frederic H.; Hults, Chad P.; Mohadjer, Solmaz; Coonrad, Warren L.; Shew, Nora B.; Labay, Keith A.

    2008-01-01

    INTRODUCTION The growth in the use of Geographic Information Systems (GIS) has highlighted the need for digital geologic maps that have been attributed with information about age and lithology. Such maps can be conveniently used to generate derivative maps for manifold special purposes such as mineral-resource assessment, metallogenic studies, tectonic studies, and environmental research. This report is part of a series of integrated geologic map databases that cover the entire United States. Three national-scale geologic maps that portray most or all of the United States already exist; for the conterminous U.S., King and Beikman (1974a,b) compiled a map at a scale of 1:2,500,000, Beikman (1980) compiled a map for Alaska at 1:2,500,000 scale, and for the entire U.S., Reed and others (2005a,b) compiled a map at a scale of 1:5,000,000. A digital version of the King and Beikman map was published by Schruben and others (1994). Reed and Bush (2004) produced a digital version of the Reed and others (2005a) map for the conterminous U.S. The present series of maps is intended to provide the next step in increased detail. State geologic maps that range in scale from 1:100,000 to 1:1,000,000 are available for most of the country, and digital versions of these state maps are the basis of this product. The digital geologic maps presented here are in a standardized format as ARC/INFO export files and as ArcView shape files. Data tables that relate the map units to detailed lithologic and age information accompany these GIS files. The map is delivered as a set 1:250,000-scale quadrangle files. To the best of our ability, these quadrangle files are edge-matched with respect to geology. When the maps are merged, the combined attribute tables can be used directly with the merged maps to make derivative maps.

  3. Horizontal Cross Bracing Detail, Vertical Cross Bracing Detail, Horizontal Cross ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Horizontal Cross Bracing Detail, Vertical Cross Bracing Detail, Horizontal Cross Bracing Joint, Vertical Cross Bracing End Detail - Ceylon Covered Bridge, Limberlost Park, spanning Wabash River at County Road 900 South, Geneva, Adams County, IN

  4. Integrating in-situ, Landsat, and MODIS data for mapping in Southern African savannas: experiences of LCCS-based land-cover mapping in the Kalahari in Namibia.

    PubMed

    Hüttich, Christian; Herold, Martin; Strohbach, Ben J; Dech, Stefan

    2011-05-01

    Integrated ecosystem assessment initiatives are important steps towards a global biodiversity observing system. Reliable earth observation data are key information for tracking biodiversity change on various scales. Regarding the establishment of standardized environmental observation systems, a key question is: What can be observed on each scale and how can land cover information be transferred? In this study, a land cover map from a dry semi-arid savanna ecosystem in Namibia was obtained based on the UN LCCS, in-situ data, and MODIS and Landsat satellite imagery. In situ botanical relevé samples were used as baseline data for the definition of a standardized LCCS legend. A standard LCCS code for savanna vegetation types is introduced. An object-oriented segmentation of Landsat imagery was used as intermediate stage for downscaling in-situ training data on a coarse MODIS resolution. MODIS time series metrics of the growing season 2004/2005 were used to classify Kalahari vegetation types using a tree-based ensemble classifier (Random Forest). The prevailing Kalahari vegetation types based on LCCS was open broadleaved deciduous shrubland with an herbaceous layer which differs from the class assignments of the global and regional land-cover maps. The separability analysis based on Bhattacharya distance measurements applied on two LCCS levels indicated a relationship of spectral mapping dependencies of annual MODIS time series features due to the thematic detail of the classification scheme. The analysis of LCCS classifiers showed an increased significance of life-form composition and soil conditions to the mapping accuracy. An overall accuracy of 92.48% was achieved. Woody plant associations proved to be most stable due to small omission and commission errors. The case study comprised a first suitability assessment of the LCCS classifier approach for a southern African savanna ecosystem.

  5. Development of a quantitative pachytene chromosome map and its unification with somatic chromosome and linkage maps of rice (Oryza sativa L.).

    PubMed

    Ohmido, Nobuko; Iwata, Aiko; Kato, Seiji; Wako, Toshiyuki; Fukui, Kiichi

    2018-01-01

    A quantitative pachytene chromosome map of rice (Oryza sativa L.) was developed using imaging methods. The map depicts not only distribution patterns of chromomeres specific to pachytene chromosomes, but also the higher order information of chromosomal structures, such as heterochromatin (condensed regions), euchromatin (decondensed regions), the primary constrictions (centromeres), and the secondary constriction (nucleolar organizing regions, NOR). These features were image analyzed and quantitatively mapped onto the map by Chromosome Image Analyzing System ver. 4.0 (CHIAS IV). Correlation between H3K9me2, an epigenetic marker and formation and/or maintenance of heterochromatin, thus was, clearly visualized. Then the pachytene chromosome map was unified with the existing somatic chromosome and linkage maps by physically mapping common DNA markers among them, such as a rice A genome specific tandem repeat sequence (TrsA), 5S and 45S ribosomal RNA genes, five bacterial artificial chromosome (BAC) clones, four P1 bacteriophage artificial chromosome (PAC) clones using multicolor fluorescence in situ hybridization (FISH). Detailed comparison between the locations of the DNA probes on the pachytene chromosomes using multicolor FISH, and the linkage map enabled determination of the chromosome number and short/long arms of individual pachytene chromosomes using the chromosome number and arm assignment designated for the linkage map. As a result, the quantitative pachytene chromosome map was unified with two other major rice chromosome maps representing somatic prometaphase chromosomes and genetic linkages. In conclusion, the unification of the three rice maps serves as an indispensable basic information, not only for an in-depth comparison between genetic and chromosomal data, but also for practical breeding programs.

  6. The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

    PubMed Central

    Liao, Yang; Smyth, Gordon K.; Shi, Wei

    2013-01-01

    Read alignment is an ongoing challenge for the analysis of data from sequencing technologies. This article proposes an elegantly simple multi-seed strategy, called seed-and-vote, for mapping reads to a reference genome. The new strategy chooses the mapped genomic location for the read directly from the seeds. It uses a relatively large number of short seeds (called subreads) extracted from each read and allows all the seeds to vote on the optimal location. When the read length is <160 bp, overlapping subreads are used. More conventional alignment algorithms are then used to fill in detailed mismatch and indel information between the subreads that make up the winning voting block. The strategy is fast because the overall genomic location has already been chosen before the detailed alignment is done. It is sensitive because no individual subread is required to map exactly, nor are individual subreads constrained to map close by other subreads. It is accurate because the final location must be supported by several different subreads. The strategy extends easily to find exon junctions, by locating reads that contain sets of subreads mapping to different exons of the same gene. It scales up efficiently for longer reads. PMID:23558742

  7. Actions of the fall prevention protocol: mapping with the classification of nursing interventions.

    PubMed

    Alves, Vanessa Cristina; Freitas, Weslen Carlos Junior de; Ramos, Jeferson Silva; Chagas, Samantha Rodrigues Garbis; Azevedo, Cissa; Mata, Luciana Regina Ferreira da

    2017-12-21

    to analyze the correspondence between the actions contained in the fall prevention protocol of the Ministry of Health and the Nursing Interventions Classification (NIC) by a cross-mapping. this is a descriptive study carried out in four stages: protocol survey, identification of NIC interventions related to nursing diagnosis, the risk of falls, cross-mapping, and validation of the mapping from the Delphi technique. there were 51 actions identified in the protocol and 42 interventions in the NIC. Two rounds of mapping evaluation were carried out by the experts. There were 47 protocol actions corresponding to 25 NIC interventions. The NIC interventions that presented the highest correspondence with protocol actions were: fall prevention, environmental-safety control, and risk identification. Regarding the classification of similarity and comprehensiveness of the 47 actions of the protocol mapped, 44.7% were considered more detailed and specific than the NIC, 29.8% less specific than the NIC and 25.5% were classified as similar in significance to the NIC. most of the actions contained in the protocol are more specific and detailed, however, the NIC contemplates a greater diversity of interventions and may base a review of the protocol to increase actions related to falls prevention..

  8. Mineral mapping and applications of imaging spectroscopy

    USGS Publications Warehouse

    Clark, R.N.; Boardman, J.; Mustard, J.; Kruse, F.; Ong, C.; Pieters, C.; Swayze, G.A.

    2006-01-01

    Spectroscopy is a tool that has been used for decades to identify, understand, and quantify solid, liquid, or gaseous materials, especially in the laboratory. In disciplines ranging from astronomy to chemistry, spectroscopic measurements are used to detect absorption and emission features due to specific chemical bonds, and detailed analyses are used to determine the abundance and physical state of the detected absorbing/emitting species. Spectroscopic measurements have a long history in the study of the Earth and planets. Up to the 1990s remote spectroscopic measurements of Earth and planets were dominated by multispectral imaging experiments that collect high-quality images in a few, usually broad, spectral bands or with point spectrometers that obtained good spectral resolution but at only a few spatial positions. However, a new generation of sensors is now available that combines imaging with spectroscopy to create the new discipline of imaging spectroscopy. Imaging spectrometers acquire data with enough spectral range, resolution, and sampling at every pixel in a raster image so that individual absorption features can be identified and spatially mapped (Goetz et al., 1985).

  9. Application of ERTS images and image processing to regional geologic problems and geologic mapping in northern Arizona

    NASA Technical Reports Server (NTRS)

    Goetz, A. F. H. (Principal Investigator); Billingsley, F. C.; Gillespie, A. R.; Abrams, M. J.; Squires, R. L.; Shoemaker, E. M.; Lucchitta, I.; Elston, D. P.

    1975-01-01

    The author has identified the following significant results. Computer image processing was shown to be both valuable and necessary in the extraction of the proper subset of the 200 million bits of information in an ERTS image to be applied to a specific problem. Spectral reflectivity information obtained from the four MSS bands can be correlated with in situ spectral reflectance measurements after path radiance effects have been removed and a proper normalization has been made. A detailed map of the major fault systems in a 90,000 sq km area in northern Arizona was compiled from high altitude photographs and pre-existing published and unpublished map data. With the use of ERTS images, three major fault systems, the Sinyala, Bright Angel, and Mesa Butte, were identified and their full extent measured. A byproduct of the regional studies was the identification of possible sources of shallow ground water, a scarce commodity in these regions.

  10. A new global approach to obtain three-dimensional displacement maps by integrating GPS and DInSAR data

    NASA Astrophysics Data System (ADS)

    Guglielmino, F.; Nunnari, G.; Puglisi, G.; Spata, A.

    2009-04-01

    We propose a new technique, based on the elastic theory, to efficiently produce an estimate of three-dimensional surface displacement maps by integrating sparse Global Position System (GPS) measurements of deformations and Differential Interferometric Synthetic Aperture Radar (DInSAR) maps of movements of the Earth's surface. The previous methodologies known in literature, for combining data from GPS and DInSAR surveys, require two steps: the first, in which sparse GPS measurements are interpolated in order to fill in GPS displacements at the DInSAR grid, and the second, to estimate the three-dimensional surface displacement maps by using a suitable optimization technique. One of the advantages of the proposed approach is that both these steps are unified. We propose a linear matrix equation which accounts for both GPS and DInSAR data whose solution provide simultaneously the strain tensor, the displacement field and the rigid body rotation tensor throughout the entire investigated area. The mentioned linear matrix equation is solved by using the Weighted Least Square (WLS) thus assuring both numerical robustness and high computation efficiency. The proposed methodology was tested on both synthetic and experimental data, these last from GPS and DInSAR measurements carried out on Mt. Etna. The goodness of the results has been evaluated by using standard errors. These tests also allow optimising the choice of specific parameters of this algorithm. This "open" structure of the method will allow in the near future to take account of other available data sets, such as additional interferograms, or other geodetic data (e.g. levelling, tilt, etc.), in order to achieve even higher accuracy.

  11. New dust opacity maps from Viking IR thermal mapper data

    NASA Technical Reports Server (NTRS)

    Martin, T. Z.; Richardson, M. I.

    1992-01-01

    Mapping of dust opacity of the Martian atmosphere, using the silicate-induced absorption of 9 micron radiation, was performed with the Viking Infrared Thermal Mapper (IRTM) data for several local dust storms and in a global sense. We present here the first results from an effort to extend the earlier mapping work to the period of the 1977b major storm, and to concentrate attention on the details of opacity behavior during the initial phases of the 1977a and b storms.

  12. Mapping of the Land Cover Spatiotemporal Characteristics in Northern Russia Caused by Climate Change

    NASA Astrophysics Data System (ADS)

    Panidi, E.; Tsepelev, V.; Torlopova, N.; Bobkov, A.

    2016-06-01

    The study is devoted to the investigation of regional climate change in Northern Russia. Due to sparseness of the meteorological observation network in northern regions, we investigate the application capabilities of remotely sensed vegetation cover as indicator of climate change at the regional scale. In previous studies, we identified statistically significant relationship between the increase of surface air temperature and increase of the shrub vegetation productivity. We verified this relationship using ground observation data collected at the meteorological stations and Normalised Difference Vegetation Index (NDVI) data produced from Terra/MODIS satellite imagery. Additionally, we designed the technique of growing seasons separation for detailed investigation of the land cover (shrub cover) dynamics. Growing seasons are the periods when the temperature exceeds +5°C and +10°C. These periods determine the vegetation productivity conditions (i.e., conditions that allow growth of the phytomass). We have discovered that the trend signs for the surface air temperature and NDVI coincide on planes and river floodplains. On the current stage of the study, we are working on the automated mapping technique, which allows to estimate the direction and magnitude of the climate change in Northern Russia. This technique will make it possible to extrapolate identified relationship between land cover and climate onto territories with sparse network of meteorological stations. We have produced the gridded maps of NDVI and NDWI for the test area in European part of Northern Russia covered with the shrub vegetation. Basing on these maps, we may determine the frames of growing seasons for each grid cell. It will help us to obtain gridded maps of the NDVI linear trend for growing seasons on cell-by-cell basis. The trend maps can be used as indicative maps for estimation of the climate change on the studied areas.

  13. Comparing orbiter and rover image-based mapping of an ancient sedimentary environment, Aeolis Palus, Gale crater, Mars

    NASA Astrophysics Data System (ADS)

    Stack, K. M.; Edwards, C. S.; Grotzinger, J. P.; Gupta, S.; Sumner, D. Y.; Calef, F. J.; Edgar, L. A.; Edgett, K. S.; Fraeman, A. A.; Jacob, S. R.; Le Deit, L.; Lewis, K. W.; Rice, M. S.; Rubin, D.; Williams, R. M. E.; Williford, K. H.

    2016-12-01

    This study provides the first systematic comparison of orbital facies maps with detailed ground-based geology observations from the Mars Science Laboratory (MSL) Curiosity rover to examine the validity of geologic interpretations derived from orbital image data. Orbital facies maps were constructed for the Darwin, Cooperstown, and Kimberley waypoints visited by the Curiosity rover using High Resolution Imaging Science Experiment (HiRISE) images. These maps, which represent the most detailed orbital analysis of these areas to date, were compared with rover image-based geologic maps and stratigraphic columns derived from Curiosity's Mast Camera (Mastcam) and Mars Hand Lens Imager (MAHLI). Results show that bedrock outcrops can generally be distinguished from unconsolidated surficial deposits in high-resolution orbital images and that orbital facies mapping can be used to recognize geologic contacts between well-exposed bedrock units. However, process-based interpretations derived from orbital image mapping are difficult to infer without known regional context or observable paleogeomorphic indicators, and layer-cake models of stratigraphy derived from orbital maps oversimplify depositional relationships as revealed from a rover perspective. This study also shows that fine-scale orbital image-based mapping of current and future Mars landing sites is essential for optimizing the efficiency and science return of rover surface operations.

  14. Comparing orbiter and rover image-based mapping of an ancient sedimentary environment, Aeolis Palus, Gale crater, Mars

    USGS Publications Warehouse

    Stack, Kathryn M.; Edwards, Christopher; Grotzinger, J. P.; Gupta, S.; Sumner, D.; Edgar, Lauren; Fraeman, A.; Jacob, S.; LeDeit, L.; Lewis, K.W.; Rice, M.S.; Rubin, D.; Calef, F.; Edgett, K.; Williams, R.M.E.; Williford, K.H.

    2016-01-01

    This study provides the first systematic comparison of orbital facies maps with detailed ground-based geology observations from the Mars Science Laboratory (MSL) Curiosity rover to examine the validity of geologic interpretations derived from orbital image data. Orbital facies maps were constructed for the Darwin, Cooperstown, and Kimberley waypoints visited by the Curiosity rover using High Resolution Imaging Science Experiment (HiRISE) images. These maps, which represent the most detailed orbital analysis of these areas to date, were compared with rover image-based geologic maps and stratigraphic columns derived from Curiosity’s Mast Camera (Mastcam) and Mars Hand Lens Imager (MAHLI). Results show that bedrock outcrops can generally be distinguished from unconsolidated surficial deposits in high-resolution orbital images and that orbital facies mapping can be used to recognize geologic contacts between well-exposed bedrock units. However, process-based interpretations derived from orbital image mapping are difficult to infer without known regional context or observable paleogeomorphic indicators, and layer-cake models of stratigraphy derived from orbital maps oversimplify depositional relationships as revealed from a rover perspective. This study also shows that fine-scale orbital image-based mapping of current and future Mars landing sites is essential for optimizing the efficiency and science return of rover surface operations.

  15. Spitzer Space Telescope IRS Spectral Mapping of Photoionized Columns in M16 and the Carina HII Regions

    NASA Astrophysics Data System (ADS)

    Cotera, Angela; Simpson, J. P.; Sellgren, K.; Stolovy, S. R.

    2013-01-01

    Photoevaporated columns of dust and gas - also called elephant trunks, pillars or fingers - are found in the periphery of many H II regions. They have been observed within the Galaxy, the SMC and the LMC. These features are thought to be sites of current star formation, but the question remains whether the columns persist because stars formed in the denser regions prior to interactions with the UV radiation and stellar winds of nearby massive stars, or because of core collapse resulting from these interactions. We have obtained Spitzer IRS spectral maps of three columns within M 16 and three columns within the Carina nebula, to test our understanding of the impact on these transitory features of differing stellar populations and initial conditions. We use the wealth of molecular, atomic and PAH emission lines located within the spectral range of the high resolution IRS modes (9.9-37.2 micron) to determine the excitation state, dust and gas temperatures, and probe the shock characteristics within the columns as a function of location. Using the IRS spectral mapping mode, in conjunction with the CUBISM tool and the CLOUDY H II region model code, we have constructed detailed maps of the accessible emission lines and derived parameters for each column. Mapping the distribution of the physical states of the dust and gas in these columns is enhancing our understanding of the competing processes within these dynamic objects. The data presented here represent the only IRS spectral maps of photoionized pillars.

  16. High-Density Genetic Linkage Map Construction and Quantitative Trait Locus Mapping for Hawthorn (Crataegus pinnatifida Bunge).

    PubMed

    Zhao, Yuhui; Su, Kai; Wang, Gang; Zhang, Liping; Zhang, Jijun; Li, Junpeng; Guo, Yinshan

    2017-07-14

    Genetic linkage maps are an important tool in genetic and genomic research. In this study, two hawthorn cultivars, Qiujinxing and Damianqiu, and 107 progenies from a cross between them were used for constructing a high-density genetic linkage map using the 2b-restriction site-associated DNA (2b-RAD) sequencing method, as well as for mapping quantitative trait loci (QTL) for flavonoid content. In total, 206,411,693 single-end reads were obtained, with an average sequencing depth of 57× in the parents and 23× in the progeny. After quality trimming, 117,896 high-quality 2b-RAD tags were retained, of which 42,279 were polymorphic; of these, 12,951 markers were used for constructing the genetic linkage map. The map contained 17 linkage groups and 3,894 markers, with a total map length of 1,551.97 cM and an average marker interval of 0.40 cM. QTL mapping identified 21 QTLs associated with flavonoid content in 10 linkage groups, which explained 16.30-59.00% of the variance. This is the first high-density linkage map for hawthorn, which will serve as a basis for fine-scale QTL mapping and marker-assisted selection of important traits in hawthorn germplasm and will facilitate chromosome assignment for hawthorn whole-genome assemblies in the future.

  17. Developments in remote sensing technology enable more detailed urban flood risk analysis.

    NASA Astrophysics Data System (ADS)

    Denniss, A.; Tewkesbury, A.

    2009-04-01

    Spaceborne remote sensors have been allowing us to build up a profile of planet earth for many years. With each new satellite launched we see the capabilities improve: new bands of data, higher resolution imagery, the ability to derive better elevation information. The combination of this geospatial data to create land cover and usage maps, all help inform catastrophe modelling systems. From Landsat 30m resolution to 2.44m QuickBird multispectral imagery; from 1m radar data collected by TerraSAR-X which enables rapid tracking of the rise and fall of a flood event, and will shortly have a twin satellite launched enabling elevation data creation; we are spoilt for choice in available data. However, just what is cost effective? It is always a question of choosing the appropriate level of input data detail for modelling, depending on the value of the risk. In the summer of 2007, the cost of the flooding in the UK was approximately £3bn and affected over 58,000 homes and businesses. When it comes to flood risk, we have traditionally considered rising river levels and surge tides, but with climate change and variations in our own construction behaviour, there are other factors to be taken into account. During those summer 2007 events, the Environment Agency suggested that around 70% of the properties damaged were the result of pluvial flooding, where high localised rainfall events overload localised drainage infrastructure, causing widespread flooding of properties and infrastructure. To create a risk model that is able to simulate such an event requires much more accurate source data than can be provided from satellite or radar. As these flood events cause considerable damage within relatively small, complex urban environments, therefore new high resolution remote sensing techniques have to be applied to better model these events. Detailed terrain data of England and Wales, plus cities in Scotland, have been produced by combining terrain measurements from the latest

  18. Using optical mapping data for the improvement of vertebrate genome assemblies.

    PubMed

    Howe, Kerstin; Wood, Jonathan M D

    2015-01-01

    Optical mapping is a technology that gathers long-range information on genome sequences similar to ordered restriction digest maps. Because it is not subject to cloning, amplification, hybridisation or sequencing bias, it is ideally suited to the improvement of fragmented genome assemblies that can no longer be improved by classical methods. In addition, its low cost and rapid turnaround make it equally useful during the scaffolding process of de novo assembly from high throughput sequencing reads. We describe how optical mapping has been used in practice to produce high quality vertebrate genome assemblies. In particular, we detail the efforts undertaken by the Genome Reference Consortium (GRC), which maintains the reference genomes for human, mouse, zebrafish and chicken, and uses different optical mapping platforms for genome curation.

  19. Linkage analysis by genotyping of sibling populations: a genetic map for the potato cyst nematode constructed using a "pseudo-F2" mapping strategy.

    PubMed

    Rouppe van der Voort, J N; van Eck, H J; van Zandvoort, P M; Overmars, H; Helder, J; Bakker, J

    1999-07-01

    A mapping strategy is described for the construction of a linkage map of a non-inbred species in which individual offspring genotypes are not amenable to marker analysis. After one extra generation of random mating, the segregating progeny was propagated, and bulked populations of offspring were analyzed. Although the resulting population structure is different from that of commonly used mapping populations, we show that the maximum likelihood formula for a normal F2 is applicable for the estimation of recombination. This "pseudo-F2" mapping strategy, in combination with the development of an AFLP assay for single cysts, facilitated the construction of a linkage map for the potato cyst nematode Globodera rostochiensis. Using 12 pre-selected AFLP primer combinations, a total of 66 segregating markers were identified, 62 of which were mapped to nine linkage groups. These 62 AFLP markers are randomly distributed and cover about 65% of the genome. An estimate of the physical size of the Globodera genome was obtained from comparisons of the number of AFLP fragments obtained with the values for Caenorhabditis elegans. The methodology presented here resulted in the first genomic map for a cyst nematode. The low value of the kilobase/centimorgan (kb/cM) ratio for the Globodera genome will facilitate map-based cloning of genes that mediate the interaction between the nematode and its host plant.

  20. SModelS v1.1 user manual: Improving simplified model constraints with efficiency maps

    NASA Astrophysics Data System (ADS)

    Ambrogi, Federico; Kraml, Sabine; Kulkarni, Suchita; Laa, Ursula; Lessa, Andre; Magerl, Veronika; Sonneveld, Jory; Traub, Michael; Waltenberger, Wolfgang

    2018-06-01

    SModelS is an automatized tool for the interpretation of simplified model results from the LHC. It allows to decompose models of new physics obeying a Z2 symmetry into simplified model components, and to compare these against a large database of experimental results. The first release of SModelS, v1.0, used only cross section upper limit maps provided by the experimental collaborations. In this new release, v1.1, we extend the functionality of SModelS to efficiency maps. This increases the constraining power of the software, as efficiency maps allow to combine contributions to the same signal region from different simplified models. Other new features of version 1.1 include likelihood and χ2 calculations, extended information on the topology coverage, an extended database of experimental results as well as major speed upgrades for both the code and the database. We describe in detail the concepts and procedures used in SModelS v1.1, explaining in particular how upper limits and efficiency map results are dealt with in parallel. Detailed instructions for code usage are also provided.

  1. 70. MISSISSIPPI, LOWNDES CO., NORTHWEST CORNER MAP OF LOWNDES COUNTY, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    70. MISSISSIPPI, LOWNDES CO., NORTHWEST CORNER MAP OF LOWNDES COUNTY, 1931 Detail of ROAD OF LOWNDES COUNTY, MISSISSIPPI, 1931 by C. L. wood, county engineer. Detail of section NW of Columbus (12 mi. N, 9 mi. W), including Plymouth, Waverly, Barton, Buttahatchie R. Orig. scale: 1 in. to 1 mi. Property of Helen (Mrs. Sam L.) Crawford, Hamilton, Ms. Sarcone Photography, Columbus, Ms., Sep 1978. - Bridges of the Upper Tombigbee River Valley, Columbus, Lowndes County, MS

  2. Mapping nuclear craters on Enewetak Atoll, Marshall Islands

    USGS Publications Warehouse

    Hampson, John C., Jr.

    1986-01-01

    In 1984, the U.S. Geological Survey conducted a detailed geologic analysis of two nuclear test craters at Enewetak Atoll, Marshall Islands, on behalf of the Defense Nuclear Agency. A multidisciplinary task force mapped the morphology, surface character, and subsurface structure of two craters, OAK and KOA. The field mapping techniques include echo sounding, sidescan sonar imaging, single-channel and multichannel seismic reflection profiling, a seismic refraction survey, and scuba and submersible operations. All operations had to be navigated precisely and correlatable with subsequent drilling and sampling operations. Mapping with a high degree of precision at scales as large as 1:1500 required corrections that often are not considered in marine mapping. Corrections were applied to the bathymetric data for location of the echo- sounding transducer relative to the navigation transponder on the ship and for transducer depth, speed of sound, and tidal variations. Sidescan sonar, single-channel seismic reflection, and scuba and submersible data were correlated in depth and map position with the bathymetric data to provide a precise, internally consistent data set. The multichannel and refraction surveys were conducted independently but compared well with bathymetry. Examples drawn from processing the bathymetric, sidescan sonar, and single- channel reflection data help illustrate problems and procedures in precision mapping.

  3. AGN Space Telescope and Optical Reverberation Mapping Project II. Ultraviolet and Optical Continuum Analysis

    NASA Astrophysics Data System (ADS)

    Fausnaugh, Michael; Agn Storm Team

    2015-01-01

    The AGN STORM collaboration recently completed an extensive reverberation mapping campaign, targeting NGC 5548 with observations spanning the hard X-rays to mid-infrared. This campaign represents a massive collaborative effort, with far UV continuum spectrophotometry obtained through an intensive HST COS program, and near-UV/optical broad band photometry obtained from Swift and over 25 ground-based telescopes (in BVR and griz). The campaign spanned the entire 2014 observing season with virtually daily cadence, which allows us to compare with unprecedented accuracy the detailed structure of the observed UV and optical continuum emission signals in this archetypal AGN. We find statistically significant time delays between lightcurves from different wavebands, and this result has implications for the temperature, ionization, and geometric configuration of the AGN's sub-parsec scale environment. We will present the UV/optical continuum lightcurves from this campaign, as well as an analysis of the wavelength-dependent structure of the time delays.

  4. Rapid Response Flood Water Mapping

    NASA Technical Reports Server (NTRS)

    Policelli, Fritz; Brakenridge, G. R.; Coplin, A.; Bunnell, M.; Wu, L.; Habib, Shahid; Farah, H.

    2010-01-01

    Since the beginning of operation of the MODIS instrument on the NASA Terra satellite at the end of 1999, an exceptionally useful sensor and public data stream have been available for many applications including the rapid and precise characterization of terrestrial surface water changes. One practical application of such capability is the near-real time mapping of river flood inundation. We have developed a surface water mapping methodology based on using only bands 1 (620-672 nm) and 2 (841-890 nm). These are the two bands at 250 m, and the use of only these bands maximizes the resulting map detail. In this regard, most water bodies are strong absorbers of incoming solar radiation at the band 2 wavelength: it could be used alone, via a thresholding procedure, to separate water (dark, low radiance or reflectance pixels) from land (much brighter pixels) (1, 2). Some previous water mapping procedures have in fact used such single band data from this and other sensors that include similar wavelength channels. Adding the second channel of data (band 1), however, allows a band ratio approach which permits sediment-laden water, often relatively light at band 2 wavelengths, to still be discriminated, and, as well, provides some removal of error by reducing the number of cloud shadow pixels that would otherwise be misclassified as water.

  5. Satellite-map position estimation for the Mars rover

    NASA Technical Reports Server (NTRS)

    Hayashi, Akira; Dean, Thomas

    1989-01-01

    A method for locating the Mars rover using an elevation map generated from satellite data is described. In exploring its environment, the rover is assumed to generate a local rover-centered elevation map that can be used to extract information about the relative position and orientation of landmarks corresponding to local maxima. These landmarks are integrated into a stochastic map which is then matched with the satellite map to obtain an estimate of the robot's current location. The landmarks are not explicitly represented in the satellite map. The results of the matching algorithm correspond to a probabilistic assessment of whether or not the robot is located within a given region of the satellite map. By assigning a probabilistic interpretation to the information stored in the satellite map, researchers are able to provide a precise characterization of the results computed by the matching algorithm.

  6. Geologic map of the Sand Creek Pass quadrangle, Larimer County, Colorado, and Albany County, Wyoming

    USGS Publications Warehouse

    Workman, Jeremiah B.; Braddock, William A.

    2010-01-01

    New geologic mapping within the Sand Creek Pass 7.5 minute quadrangle defines geologic relationships within the northern Front Range of Colorado along the Wyoming border approximately 35 km south of Laramie, Wyo. Previous mapping within the quadrangle was limited to regional reconnaissance mapping; Eaton Reservoir 7.5 minute quadrangle to the east (2008), granite of the Rawah batholith to the south (1983), Laramie River valley to the west (1979), and the Laramie 30' x 60' quadrangle to the north (2007). Fieldwork was completed during 1981 and 1982 and during 2007 and 2008. Mapping was compiled at 1:24,000-scale. Minimal petrographic work was done and no isotope work was done in the quadrangle area, but detailed petrographic and isotope studies were performed on correlative map units in surrounding areas as part of a related regional study of the northern Front Range. Stratigraphy of Proterozoic rocks is primarily based upon field observation of bulk mineral composition, macroscopic textural features, and field relationships that allow for correlation with rocks studied in greater detail outside of the map area. Stratigraphy of Phanerozoic rocks is primarily based upon correlation with similar rocks to the north in the Laramie Basin of Wyoming and to the east in the Front Range of Colorado.

  7. Evaluation criteria for software classification inventories, accuracies, and maps

    NASA Technical Reports Server (NTRS)

    Jayroe, R. R., Jr.

    1976-01-01

    Statistical criteria are presented for modifying the contingency table used to evaluate tabular classification results obtained from remote sensing and ground truth maps. This classification technique contains information on the spatial complexity of the test site, on the relative location of classification errors, on agreement of the classification maps with ground truth maps, and reduces back to the original information normally found in a contingency table.

  8. Radon potential mapping of the Tralee-Castleisland and Cavan areas (Ireland) based on airborne gamma-ray spectrometry and geology.

    PubMed

    Appleton, J D; Doyle, E; Fenton, D; Organo, C

    2011-06-01

    The probability of homes in Ireland having high indoor radon concentrations is estimated on the basis of known in-house radon measurements averaged over 10 km × 10 km grid squares. The scope for using airborne gamma-ray spectrometer data for the Tralee-Castleisland area of county Kerry and county Cavan to predict the radon potential (RP) in two distinct areas of Ireland is evaluated in this study. Airborne data are compared statistically with in-house radon measurements in conjunction with geological and ground permeability data to establish linear regression models and produce radon potential maps. The best agreement between the percentage of dwellings exceeding the reference level (RL) for radon concentrations in Ireland (% > RL), estimated from indoor radon data, and modelled RP in the Tralee-Castleisland area is produced using models based on airborne gamma-ray spectrometry equivalent uranium (eU) and ground permeability data. Good agreement was obtained between the % > RL from indoor radon data and RP estimated from eU data in the Cavan area using terrain specific models. In both areas, RP maps derived from eU data are spatially more detailed than the published 10 km grid map. The results show the potential for using airborne radiometric data for producing RP maps.

  9. Optimized multiple linear mappings for single image super-resolution

    NASA Astrophysics Data System (ADS)

    Zhang, Kaibing; Li, Jie; Xiong, Zenggang; Liu, Xiuping; Gao, Xinbo

    2017-12-01

    Learning piecewise linear regression has been recognized as an effective way for example learning-based single image super-resolution (SR) in literature. In this paper, we employ an expectation-maximization (EM) algorithm to further improve the SR performance of our previous multiple linear mappings (MLM) based SR method. In the training stage, the proposed method starts with a set of linear regressors obtained by the MLM-based method, and then jointly optimizes the clustering results and the low- and high-resolution subdictionary pairs for regression functions by using the metric of the reconstruction errors. In the test stage, we select the optimal regressor for SR reconstruction by accumulating the reconstruction errors of m-nearest neighbors in the training set. Thorough experimental results carried on six publicly available datasets demonstrate that the proposed SR method can yield high-quality images with finer details and sharper edges in terms of both quantitative and perceptual image quality assessments.

  10. IRS Spectral Maps of Photoevaporative Columns in M16, Carina, and the Galactic Center

    NASA Astrophysics Data System (ADS)

    Cotera, Angela; Healy, Kevin; Hester, Jeff; Sellgren, Kris; Simpson, Janet; Stolovy, Susan

    2008-03-01

    Photoevaporated columns of dust and gas - also called elephant trunks, pillars or fingers - are found in the periphery of H II regions, and have been observed within the Galaxy, the SMC and the LMC. These features are sites of current star formation, but the question remains whether the columns persist because stars formed in the denser regions prior to interactions with the UV radiation and stellar winds of nearby massive stars, or because of core collapse resulting from these interactions. Mapping the distribution of the physical states of the dust and gas in these columns is a necessary step towards understanding the possible star formation mechanisms within these dynamic objects. We propose to obtain IRS spectral maps of columns within M 16, the Carina nebula, and the Galactic center (GC) to understand the effects on these pillars from different stellar populations and initial conditions, and to better understand star formation in the GC. Within the spectral range of the high resolution IRS modes (9.9-37.2 micron) there are a wealth of molecular, atomic and PAH emission lines that will enable us to determine the excitation state, dust and gas temperatures, and probe the shock characteristics within the columns. Using the IRS spectral mapping mode, in conjunction with the CUBISM tool and the CLOUDY H II region model code, we will be able to construct detailed maps of the accessible emission lines and derived parameters for each column. IRS mapping of elephant trunks has not been done to date, yet provides a wealth of information unobtainable for the foreseeable future once Cycle 5 is completed.

  11. Infrared and visible image fusion based on visual saliency map and weighted least square optimization

    NASA Astrophysics Data System (ADS)

    Ma, Jinlei; Zhou, Zhiqiang; Wang, Bo; Zong, Hua

    2017-05-01

    The goal of infrared (IR) and visible image fusion is to produce a more informative image for human observation or some other computer vision tasks. In this paper, we propose a novel multi-scale fusion method based on visual saliency map (VSM) and weighted least square (WLS) optimization, aiming to overcome some common deficiencies of conventional methods. Firstly, we introduce a multi-scale decomposition (MSD) using the rolling guidance filter (RGF) and Gaussian filter to decompose input images into base and detail layers. Compared with conventional MSDs, this MSD can achieve the unique property of preserving the information of specific scales and reducing halos near edges. Secondly, we argue that the base layers obtained by most MSDs would contain a certain amount of residual low-frequency information, which is important for controlling the contrast and overall visual appearance of the fused image, and the conventional "averaging" fusion scheme is unable to achieve desired effects. To address this problem, an improved VSM-based technique is proposed to fuse the base layers. Lastly, a novel WLS optimization scheme is proposed to fuse the detail layers. This optimization aims to transfer more visual details and less irrelevant IR details or noise into the fused image. As a result, the fused image details would appear more naturally and be suitable for human visual perception. Experimental results demonstrate that our method can achieve a superior performance compared with other fusion methods in both subjective and objective assessments.

  12. National Park Service Vegetation Mapping Inventory Program: Appalachian National Scenic Trail vegetation mapping project

    USGS Publications Warehouse

    Hop, Kevin D.; Strassman, Andrew C.; Hall, Mark; Menard, Shannon; Largay, Ery; Sattler, Stephanie; Hoy, Erin E.; Ruhser, Janis; Hlavacek, Enrika; Dieck, Jennifer

    2017-01-01

    -band digital aerial imagery using digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems (GIS). (Digital aerial imagery was collected each fall during 2009–11 to capture leaf-phenology change of hardwood trees across the latitudinal range of APPA.) The interpreted data were digitally and spatially referenced, thus making the spatial-database layers usable in GIS. Polygon units were mapped to either a 0.5-hectare (ha) or 0.25-ha minimum mapping unit, depending on vegetation type or scenario; however, polygon units were mapped to 0.1 ha for alpine vegetation.A geodatabase containing various feature-class layers and tables provide locations and support data to USNVC vegetation types (vegetation map layer), vegetation plots, verification sites, validation sites, AA sites, project boundary extent and zones, and aerial image centers and flight lines. The feature-class layer and related tables of the vegetation map layer provide 30,395 polygons of detailed attribute data covering 110,919.7 ha, with an average polygon size of 3.6 ha; the vegetation map coincides closely with the administrative boundary for APPA.Summary reports generated from the vegetation map layer of the map classes representing USNVC natural (including ruderal) vegetation types apply to 28,242 polygons (92.9% of polygons) and cover 106,413.0 ha (95.9%) of the map extent for APPA. The map layer indicates APPA to be 92.4% forest and woodland (102,480.8 ha), 1.7% shrubland (1866.3 ha), and 1.8% herbaceous cover (2,065.9 ha). Map classes representing park-special vegetation (undefined in the USNVC) apply to 58 polygons (0.2% of polygons) and cover 404.3 ha (0.4%) of the map extent. Map classes representing USNVC cultural types apply to 1,777 polygons (5.8% of polygons) and cover 2,516.3 ha (2.3%) of the map extent. Map classes representing nonvegetated water (non-USNVC) apply to 332 polygons (1.1% of polygons) and cover 1,586.2 ha (1.4%) of the map extent.

  13. Planetary Geologic Mapping Handbook - 2010. Appendix

    NASA Technical Reports Server (NTRS)

    Tanaka, K. L.; Skinner, J. A., Jr.; Hare, T. M.

    2010-01-01

    Geologic maps present, in an historical context, fundamental syntheses of interpretations of the materials, landforms, structures, and processes that characterize planetary surfaces and shallow subsurfaces. Such maps also provide a contextual framework for summarizing and evaluating thematic research for a given region or body. In planetary exploration, for example, geologic maps are used for specialized investigations such as targeting regions of interest for data collection and for characterizing sites for landed missions. Whereas most modern terrestrial geologic maps are constructed from regional views provided by remote sensing data and supplemented in detail by field-based observations and measurements, planetary maps have been largely based on analyses of orbital photography. For planetary bodies in particular, geologic maps commonly represent a snapshot of a surface, because they are based on available information at a time when new data are still being acquired. Thus the field of planetary geologic mapping has been evolving rapidly to embrace the use of new data and modern technology and to accommodate the growing needs of planetary exploration. Planetary geologic maps have been published by the U.S. Geological Survey (USGS) since 1962. Over this time, numerous maps of several planetary bodies have been prepared at a variety of scales and projections using the best available image and topographic bases. Early geologic map bases commonly consisted of hand-mosaicked photographs or airbrushed shaded-relief views and geologic linework was manually drafted using mylar bases and ink drafting pens. Map publishing required a tedious process of scribing, color peel-coat preparation, typesetting, and photo-laboratory work. Beginning in the 1990s, inexpensive computing, display capability and user-friendly illustration software allowed maps to be drawn using digital tools rather than pen and ink, and mylar bases became obsolete. Terrestrial geologic maps published by

  14. Large-scale mapping of mutations affecting zebrafish development.

    PubMed

    Geisler, Robert; Rauch, Gerd-Jörg; Geiger-Rudolph, Silke; Albrecht, Andrea; van Bebber, Frauke; Berger, Andrea; Busch-Nentwich, Elisabeth; Dahm, Ralf; Dekens, Marcus P S; Dooley, Christopher; Elli, Alexandra F; Gehring, Ines; Geiger, Horst; Geisler, Maria; Glaser, Stefanie; Holley, Scott; Huber, Matthias; Kerr, Andy; Kirn, Anette; Knirsch, Martina; Konantz, Martina; Küchler, Axel M; Maderspacher, Florian; Neuhauss, Stephan C; Nicolson, Teresa; Ober, Elke A; Praeg, Elke; Ray, Russell; Rentzsch, Brit; Rick, Jens M; Rief, Eva; Schauerte, Heike E; Schepp, Carsten P; Schönberger, Ulrike; Schonthaler, Helia B; Seiler, Christoph; Sidi, Samuel; Söllner, Christian; Wehner, Anja; Weiler, Christian; Nüsslein-Volhard, Christiane

    2007-01-09

    Large-scale mutagenesis screens in the zebrafish employing the mutagen ENU have isolated several hundred mutant loci that represent putative developmental control genes. In order to realize the potential of such screens, systematic genetic mapping of the mutations is necessary. Here we report on a large-scale effort to map the mutations generated in mutagenesis screening at the Max Planck Institute for Developmental Biology by genome scanning with microsatellite markers. We have selected a set of microsatellite markers and developed methods and scoring criteria suitable for efficient, high-throughput genome scanning. We have used these methods to successfully obtain a rough map position for 319 mutant loci from the Tübingen I mutagenesis screen and subsequent screening of the mutant collection. For 277 of these the corresponding gene is not yet identified. Mapping was successful for 80 % of the tested loci. By comparing 21 mutation and gene positions of cloned mutations we have validated the correctness of our linkage group assignments and estimated the standard error of our map positions to be approximately 6 cM. By obtaining rough map positions for over 300 zebrafish loci with developmental phenotypes, we have generated a dataset that will be useful not only for cloning of the affected genes, but also to suggest allelism of mutations with similar phenotypes that will be identified in future screens. Furthermore this work validates the usefulness of our methodology for rapid, systematic and inexpensive microsatellite mapping of zebrafish mutations.

  15. Mapping protein-RNA interactions by RCAP, RNA-cross-linking and peptide fingerprinting.

    PubMed

    Vaughan, Robert C; Kao, C Cheng

    2015-01-01

    RNA nanotechnology often feature protein RNA complexes. The interaction between proteins and large RNAs are difficult to study using traditional structure-based methods like NMR or X-ray crystallography. RCAP, an approach that uses reversible-cross-linking affinity purification method coupled with mass spectrometry, has been developed to map regions within proteins that contact RNA. This chapter details how RCAP is applied to map protein-RNA contacts within virions.

  16. Multiresolution saliency map based object segmentation

    NASA Astrophysics Data System (ADS)

    Yang, Jian; Wang, Xin; Dai, ZhenYou

    2015-11-01

    Salient objects' detection and segmentation are gaining increasing research interest in recent years. A saliency map can be obtained from different models presented in previous studies. Based on this saliency map, the most salient region (MSR) in an image can be extracted. This MSR, generally a rectangle, can be used as the initial parameters for object segmentation algorithms. However, to our knowledge, all of those saliency maps are represented in a unitary resolution although some models have even introduced multiscale principles in the calculation process. Furthermore, some segmentation methods, such as the well-known GrabCut algorithm, need more iteration time or additional interactions to get more precise results without predefined pixel types. A concept of a multiresolution saliency map is introduced. This saliency map is provided in a multiresolution format, which naturally follows the principle of the human visual mechanism. Moreover, the points in this map can be utilized to initialize parameters for GrabCut segmentation by labeling the feature pixels automatically. Both the computing speed and segmentation precision are evaluated. The results imply that this multiresolution saliency map-based object segmentation method is simple and efficient.

  17. Development and comparison of processing maps of Mg-3Sn-1Ca alloy from data obtained in tension versus compression

    NASA Astrophysics Data System (ADS)

    Rao, K. P.; Suresh, K.; Prasad, Y. V. R. K.; Hort, N.

    2018-01-01

    The hot workability of extruded Mg-3Sn-1Ca alloy has been evaluated by developing processing maps with flow stress data from compression and tensile tests with a view to find the effect of the applied state-of-stress. The processing maps developed at a strain of 0.2 are essentially similar irrespective of the mode of deformation - compression or tension, and exhibit three domains in the temperature ranges: (1) 350 - 425 °C, and (2) 450 - 550 °C and (3) 400 - 500 °C, the first two occurring at lower strain rates and the third occurring at higher strain rates. In all the three domains, dynamic recrystallization occurs and is caused by non-basal slip and controlled by lattice self-diffusion in the first and second domains and grain boundary self-diffusion in the third domain. The state-of-stress imposed on the specimen (compression or tension) does not have any significant effect on the processing maps.

  18. Comparative morphometry of facial surface models obtained from a stereo vision system in a healthy population

    NASA Astrophysics Data System (ADS)

    López, Leticia; Gastélum, Alfonso; Chan, Yuk Hin; Delmas, Patrice; Escorcia, Lilia; Márquez, Jorge

    2014-11-01

    Our goal is to obtain three-dimensional measurements of craniofacial morphology in a healthy population, using standard landmarks established by a physical-anthropology specialist and picked from computer reconstructions of the face of each subject. To do this, we designed a multi-stereo vision system that will be used to create a data base of human faces surfaces from a healthy population, for eventual applications in medicine, forensic sciences and anthropology. The acquisition process consists of obtaining the depth map information from three points of views, each depth map is obtained from a calibrated pair of cameras. The depth maps are used to build a complete, frontal, triangular-surface representation of the subject face. The triangular surface is used to locate the landmarks and the measurements are analyzed with a MATLAB script. The classification of the subjects was done with the aid of a specialist anthropologist that defines specific subject indices, according to the lengths, areas, ratios, etc., of the different structures and the relationships among facial features. We studied a healthy population and the indices from this population will be used to obtain representative averages that later help with the study and classification of possible pathologies.

  19. Development of regional liquefaction-induced deformation hazard maps

    USGS Publications Warehouse

    Rosinski, A.; Knudsen, K.-L.; Wu, J.; Seed, R.B.; Real, C.R.; ,

    2004-01-01

    This paper describes part of a project to assess the feasibility of producing regional (1:24,000-scale) liquefaction hazard maps that are based-on potential liquefaction-induced deformation. The study area is the central Santa Clara Valley, at the south end of San Francisco Bay in Central California. The information collected and used includes: a) detailed Quaternary geological mapping, b) over 650 geotechnical borings, c) probabilistic earthquake shaking information, and d) ground-water levels. Predictions of strain can be made using either empirical formulations or numerical simulations. In this project lateral spread displacements are estimated and new empirical relations to estimate future volumetric and shear strain are used. Geotechnical boring data to are used to: (a) develop isopach maps showing the thickness of sediment thatis likely to liquefy and deform under earthquake shaking; and (b) assess the variability in engineering properties within and between geologic map units. Preliminary results reveal that late Holocene deposits are likely to experience the greatest liquefaction-induced strains, while Holocene and late Pleistocene deposits are likely to experience significantly less horizontal and vertical strain in future earthquakes. Development of maps based on these analyses is feasible.

  20. Markov-random-field-based super-resolution mapping for identification of urban trees in VHR images

    NASA Astrophysics Data System (ADS)

    Ardila, Juan P.; Tolpekin, Valentyn A.; Bijker, Wietske; Stein, Alfred

    2011-11-01

    Identification of tree crowns from remote sensing requires detailed spectral information and submeter spatial resolution imagery. Traditional pixel-based classification techniques do not fully exploit the spatial and spectral characteristics of remote sensing datasets. We propose a contextual and probabilistic method for detection of tree crowns in urban areas using a Markov random field based super resolution mapping (SRM) approach in very high resolution images. Our method defines an objective energy function in terms of the conditional probabilities of panchromatic and multispectral images and it locally optimizes the labeling of tree crown pixels. Energy and model parameter values are estimated from multiple implementations of SRM in tuning areas and the method is applied in QuickBird images to produce a 0.6 m tree crown map in a city of The Netherlands. The SRM output shows an identification rate of 66% and commission and omission errors in small trees and shrub areas. The method outperforms tree crown identification results obtained with maximum likelihood, support vector machines and SRM at nominal resolution (2.4 m) approaches.