Sample records for occurrences palaeoenvironments taphonomy

  1. Geology and taphonomy of the L'Espinau dinosaur bonebed, a singular lagoonal site from the Maastrichtian of South-Central Pyrenees

    NASA Astrophysics Data System (ADS)

    Fondevilla, V.; Vicente, A.; Battista, F.; Sellés, A. G.; Dinarès-Turell, J.; Martín-Closas, C.; Anadón, P.; Vila, B.; Razzolini, N. L.; Galobart, À.; Oms, O.

    2017-06-01

    The L'Espinau site is a dinosaur bonebed from the Upper Cretaceous of the South-Central Pyrenees (north-eastern Spain) that have provided hundreds of bone remains attributed to hadrosauroids, together with a rich assemblage of herpetofauna, fish and microflora. Magnetostratigraphy calibrated the site with the early late Maastrichtian, and the combined sedimentology, stable isotope geochemistry and palaeoecology revealed that this fossil site formed in a lagoon, in which a mixed freshwater-brackish palaeoenvironment was developed. This setting displays a south-north charophyte zonation from freshwater (Clavator brachycerus-dominated assemblage) to brackish or eurihaline conditions (Feistiella malladae-dominated assemblage), revealing a palaeoenvironment change towards the coast. Sedimentology and taphonomy (bidirectional arrangement of long bones, abrasion and disarticulation) indicate that the L'Espinau site is the result of a cohesive mass flow event originated very close to the sea. This process entrained and mixed fauna from both the terrestrial and the brackish/marine environment of a lagoon. An increasing of the water runoff (e.g. by intense rainfall) reworking poorly consolidated sediments is considered here as the most probable triggering mechanism. Mass flow-hosted bonebeds are commonly linked to fluvial palaeoenvironments, so our study case is a rare example of bones accumulating near the sea. This study adds evidence that hadrosauroids inhabited littoral environments during the Maastrichtian in the southern Pyrenean area.

  2. Identifying tsunami deposits using shell taphonomy: Sur lagoon, Oman

    NASA Astrophysics Data System (ADS)

    Donato, S.; Reinhardt, E.; Rothaus, R.; Boyce, J.

    2007-05-01

    On November 28th, 1945 an 8.1 magnitude earthquake focused in the eastern portion of the Makran subduction zone (Arabian Sea) generated a powerful tsunami that destroyed many coastal villages in Pakistan and India. Reports indicate that the tsunami also caused significant damage in Muscat, Oman, although its effects elsewhere in Oman are unknown. A thick bivalve dominated shell horizon was discovered inside the Sur lagoon, which is located on the eastern promontory of Oman (200 km south of Muscat). This shell deposit is significant because it is laterally extensive (> 1 km2), extends deep within the lagoon (>2 km), ranges in thickness from 5 - 25 cm at the sample localities, contains numerous subtidal and offshore bivalve species, and articulated subtidal and offshore bivalve species are abundant. Although there is an absence of typical tsunami indicators such as allochthonous sediment in and around the lagoon, verbal accounts, cultural evidence recovered during coring, and the absence of strong storms during the past 100 years indicates that this shell unit was caused by the 1945 tsunami. In this setting, it would be advantageous to have another proxy for tsunami detection and risk prediction. The use of shell taphonomy is one of the potential indicators and here we present new evidence of its utility. We sampled this unit in eight locations, and compared the shell taphonomy to surface shell samples collected from beach and reworked horizons in the lagoon, and to shell samples from a known tsunami and corresponding storm/ballast deposit in Israel (Reinhardt et al., 2006). Taphonomic analysis yielded promising results, as the two tsunami horizons shared excellent agreement between the amount of fragmented shells, and the percentage of shells displaying angular breaks. Both of these categories were significantly different from the percentage of fragments and angular fragments recovered from the reworked, beach, and storm/ballast deposits, indicating different

  3. The anatomy, taphonomy, taxonomy and systematic affinity of Markuelia: Early Cambrian to Early Ordovician scalidophorans

    USGS Publications Warehouse

    Dong, X.-P.; Bengtson, S.; Gostling, N.J.; Cunningham, J.A.; Harvey, T.H.P.; Kouchinsky, A.; Val'Kov, A.K.; Repetski, J.E.; Stampanoni, M.; Marone, F.; Donoghue, P.C.J.

    2010-01-01

    Markuelia is a vermiform, annulated introvertan animal known as embryonic fossils from the Lower Cambrian to Lower Ordovician. Analysis of an expanded and revised dataset for Introverta shows that the precise position of Markuelia within this clade is dependent on the taxa included. As a result, Markuelia is assigned to the scalidophoran total group to reflect uncertainty as to whether it is a stem-scalidophoran or a stem-priapulid. The taxonomy of the genus is revised to provide an improved taxonomic framework for material assigned to Markuelia. Five species are recognized: M. secunda Val'kov, M. hunanensis Dong and Donoghue, M. lauriei Haug et al., M. spinulifera sp. nov. and M. waloszeki sp. nov. Finally, the preservation of Markuelia is evaluated in the light of both the taphonomy of the fossil embryos themselves and the experimental taphonomy of the priapulid Priapulus caudatus, which has been proposed as both a close relative and an anatomical analogue of Markuelia. ?? The Palaeontological Association.

  4. Taphonomy for taxonomists: Implications of predation in small mammal studies

    NASA Astrophysics Data System (ADS)

    Fernández-Jalvo, Yolanda; Andrews, Peter; Denys, Christiane; Sesé, Carmen; Stoetzel, Emmanuelle; Marin-Monfort, Dolores; Pesquero, Dolores

    2016-05-01

    Predation is one of the most recurrent sources of bone accumulations. The influence of predation is widely studied for large mammal sites where humans, acting as predators, produce bone accumulations similar to carnivore accumulations. Similarly, small mammal fossil sites are mainly occupation levels of predators (nests or dens). In both cases, investigations of past events can be compared with present day equivalents or proxies. Chewing marks are sometimes present on large mammal predator accumulations, but digestion traits are the most direct indication of predation, and evidence for this is always present in small mammal (prey) fossil assemblages. Digestion grades and frequency indicates predator type and this is well established since the publication of Andrews (1990). The identification of the predator provides invaluable information for accurate interpretation of the palaeoenvironment. Traditionally, palaeoenvironmental interpretations are obtained from the taxonomic species identified in the site, but rather than providing direct interpretations of the surrounding palaeoenvironment, this procedure actually describes the dietary preferences of the predators and the type of occupation (nests, marking territory, dens, etc). This paper reviews the identification of traits produced by predators on arvicolins, murins and soricids using a method that may be used equally by taxonomists and taphonomists. It aims to provide the "tools" for taxonomists to identify the predator based on their methodology, which is examining the occlusal surfaces of teeth rather than their lateral aspects. This will greatly benefit both the work of taphonomists and taxonomists to recognize signs of predation and the improvement of subsequent palaeoecological interpretations of past organisms and sites by identifying both the prey and the predator.

  5. Palynostratigraphy, palynofacies and palaeoenvironment of deposition of Selandian to Aquitanian sediments, southeastern Nigeria

    NASA Astrophysics Data System (ADS)

    Okeke, Kingsley K.; Umeji, Obianuju P.

    2016-08-01

    Investigation of outcrop sections along the Onitsha-Awka transect in the Niger Delta Basin southeastern Nigeria was undertaken to assess the palynological composition, palynofacies and palaeoenvironment of deposition. Stratigraphic ranges of palynomorphs suggest an age of Selandian to Aquitanian. The palynological composition is marked by abundance of dinoflagellate cysts in the Imo Formation (Selandian to Thanetian), dominance of spores and pollen over dinoflagellate cysts in the Nanka Formation (Ypresian to Bartonian), and overwhelming amounts of spore and pollen in the Ogwashi Formation (Pariabonian to Aquitanian). Palynofacies content shows dominance of structureless organic matter in the Imo Formation, few phytoclasts in the Nanka Formation and maximum phytoclast amounts in the Ogwashi Formation. Thanetian to Ypresian boundary was marked by the mixing of older Palaeocene and younger Eocene microfossils, decrease of microflora towards the end of Palaeocene and the evolution of abundant and more diverse Eocene taxa. The Imo Formation was deposited in middle to outer neritic zone based on abundance of gonyaulacacean cysts. However, peridiniacean and terrestrial microflora extend the deposition range to shallow waters of inner neritic and coastal zone. Increase in diversity and abundance of terrestrial palynomorphs over marine palynomorphs assemblages in the overlying Nanka Formation suggest deposition under alternating coastal and inner neritic conditions while the Ogwashi Formation records oscillating coastal plain and brackish water depositional conditions. The palaeoenvironments illustrate that general retrogradation was followed by progradation of the delta during the Cenozoic.

  6. A geochemical study of the Ediacaran discoidal fossil Aspidella preserved in limestones: Implications for its taphonomy and paleoecology.

    PubMed

    Bykova, N; Gill, B C; Grazhdankin, D; Rogov, V; Xiao, S

    2017-07-01

    The Ediacara biota features the rise of macroscopic complex life immediately before the Cambrian explosion. One of the most abundant and widely distributed elements of the Ediacara biota is the discoidal fossil Aspidella, which is interpreted as a subsurface holdfast possibly anchoring a frondose epibenthic organism. It is a morphologically simple fossil preserved mainly in siliciclastic rocks, which are unsuitable for comprehensive stable isotope geochemical analyses to decipher its taphonomy and paleoecology. In this regard, three-dimensionally preserved Aspidella fossils from upper Ediacaran limestones of the Khatyspyt Formation in the Olenek Uplift of northern Siberia offer a rare opportunity to leverage geochemistry for insights into their taphonomy and paleoecology. To take advantage of this opportunity, we analyzed δ 13 C carb , δ 18 O carb , δ 13 C org , δ 34 S pyr , and iron speciation of the Khatyspyt Aspidella fossils and surrounding sediment matrix in order to investigate whether they hosted microbial symbionts, how they were fossilized, and the redox conditions of their ecological environments. Aspidella holdfasts and surrounding sediment matrix show indistinguishable δ 13 C org values, suggesting they did not host and derive significant amount of nutrients from microbial symbionts such as methanogens, methylotrophs, or sulfide-oxidizing bacteria. δ 13 C carb , δ 18 O carb , and δ 34 S pyr data, along with petrographic observations, suggest that microbial sulfate reduction facilitated the preservation of Aspidella by promoting early authigenic calcite cementation in the holdfasts before matrix cementation and sediment compaction. Iron speciation data are equivocal, largely because of the low total iron concentrations. However, consideration of published sulfur isotope and biomarker data suggests that Aspidella likely lived in non-euxinic waters. It is possible that Aspidella was an opportunistic organism, colonizing the seafloor in large

  7. Quartz grains reveal sedimentary palaeoenvironment and past storm events: A case study from eastern Baltic

    NASA Astrophysics Data System (ADS)

    Kalińska-Nartiša, Edyta; Stivrins, Normunds; Grudzinska, Ieva

    2018-01-01

    Sediment record collected from the coastal lake serves as a powerful tool for reconstructing changes in palaeoenvironment and understanding the potential signals of past storminess. In this study, we use several proxies from sediment of the Holocene Thermal Maximum at coastal Lake Lilaste, Latvia. We focus on surface texture of quartz grains from the mineral inorganic fraction as indicators of depositional environments. We then use this as a proxy for potential storm transport and combine with information on granulometry, diatom stratigraphy and chronology to answer the question whether flux of quartz grains in the lake originated from the sea or from the land. Analyses in a binocular and scanning electron microscope reveal that most of the investigated quartz grains originate from dwelling in the seawater and wave action in the nearshore zone. Grains representing very energetic subaqueous environment similar to storm events are also present. Terrestrial record is of minor significance and visible through occurrence of aeolian quartz grains. During drier and colder conditions, an influx of sand with aeolian imprint was delivered to the lake between 8500 and 7800 cal yr BP. Marine and terrestrial conditions alternated between 7800 and 6000 cal yr BP. Storm-induced grains were likely deposited three times: at 7300 cal yr BP, 6600-6400 cal yr BP, and 6200-6000 cal yr BP. Overall stable marine environmental conditions prevailed between 6000 and 4000 cal yr BP except of the last portion of terrestrial-induced sediment at 4100 cal yr BP.

  8. Palaeoenvironments and hominoid evolution.

    PubMed

    Pickford, Martin

    2002-03-01

    One of the key features that separates humans and their closest relatives (extinct species of the genus Homo and Praeanthropus and the australopithecines Australopithecus and Paranthropus) on the one hand, from the other hominoids, on the other, is their obligate bipedal locomotion when on the ground. This major difference from the generally quadrupedal locomotion practiced by other hominoids (Pan, Gorilla, Pongo and many extinct lineages) is reflected in many parts of the body, including all the major bones in the legs, arms, trunk and cranium. Locomotion has thus been of major interest to those interested in human origins, evolution, classification and phylogeny. A major hurdle to studies of the origins of bipedalism concerns the paucity of African hominoid fossils between 15 Ma, when all the adequately known hominoids were quadrupedal (most were pronograde, but at least one lineage was orthograde), and 4.2 Ma by which time fully bipedal hominids were established in Africa. Examination of Old World geology and palaeontology reveals a great deal about the evolution of palaeoenvironments and faunas during this period, and it is suggested that hominids evolved bipedal locomotion at the same time that there was a fundamental reorganisation of faunas towards the end of the Miocene. This faunal turnover resulted in the establishment of faunal lineages of "modern" aspect in Africa at the expense of "archaic" lineages which either went extinct or suffered a diminution of diversity. Many of the "modern" lineages were adapted to open country habitats in which grass became a major component of the diet as shown by modifications in the cheek teeth. Hominoids, in contrast, retained their traditional diet but were obliged to forage over greater and greater areas in order to do so, and this tactic led to pressures to modify the locomotor system rather than the diet. If bipedal hominids originated during this period, then the family Hominidae (sensu stricto) dates from about 8

  9. The 2.1 Ga old Francevillian biota: biogenicity, taphonomy and biodiversity.

    PubMed

    El Albani, Abderrazak; Bengtson, Stefan; Canfield, Donald E; Riboulleau, Armelle; Rollion Bard, Claire; Macchiarelli, Roberto; Ngombi Pemba, Lauriss; Hammarlund, Emma; Meunier, Alain; Moubiya Mouele, Idalina; Benzerara, Karim; Bernard, Sylvain; Boulvais, Philippe; Chaussidon, Marc; Cesari, Christian; Fontaine, Claude; Chi-Fru, Ernest; Garcia Ruiz, Juan Manuel; Gauthier-Lafaye, François; Mazurier, Arnaud; Pierson-Wickmann, Anne Catherine; Rouxel, Olivier; Trentesaux, Alain; Vecoli, Marco; Versteegh, Gerard J M; White, Lee; Whitehouse, Martin; Bekker, Andrey

    2014-01-01

    The Paleoproterozoic Era witnessed crucial steps in the evolution of Earth's surface environments following the first appreciable rise of free atmospheric oxygen concentrations ∼2.3 to 2.1 Ga ago, and concomitant shallow ocean oxygenation. While most sedimentary successions deposited during this time interval have experienced thermal overprinting from burial diagenesis and metamorphism, the ca. 2.1 Ga black shales of the Francevillian B Formation (FB2) cropping out in southeastern Gabon have not. The Francevillian Formation contains centimeter-sized structures interpreted as organized and spatially discrete populations of colonial organisms living in an oxygenated marine ecosystem. Here, new material from the FB2 black shales is presented and analyzed to further explore its biogenicity and taphonomy. Our extended record comprises variably sized, shaped, and structured pyritized macrofossils of lobate, elongated, and rod-shaped morphologies as well as abundant non-pyritized disk-shaped macrofossils and organic-walled acritarchs. Combined microtomography, geochemistry, and sedimentary analysis suggest a biota fossilized during early diagenesis. The emergence of this biota follows a rise in atmospheric oxygen, which is consistent with the idea that surface oxygenation allowed the evolution and ecological expansion of complex megascopic life.

  10. Stratigraphy, palaeoenvironments and palaeoecology of the Loch Humphrey Burn lagerstätte and other Mississippian palaeobotanical localities of the Kilpatrick Hills, southwest Scotland

    PubMed Central

    Stevens, Liadan G.; Hilton, Jason

    2016-01-01

    Background and Aims. The largely Mississippian strata of the Kilpatrick Hills, located at the western end of the Scottish Midland Valley, enclose several macrofossil floras that together contain ca 21 organ-species of permineralised plants and ca 44 organ-species of compressed plants, here estimated to represent 25 whole-plant species (Glenarbuck = nine, Loch Humphrey Burn Lower = 11, Upper = seven). The most significant locality is the internationally important volcanigenic sequence that is reputedly intercalated within the Clyde Plateau Lava Formation at Loch Humphrey Burn, where ca 30 m of reworked tuffs and other clastic sediments enclose one of the world’s most important terrestrial lagerstätten of this period. We here explore the palaeoecology and palaeoenvironments of the locality, and elucidate its controversial age. Methods. Repeated re-excavation of key exposures allowed recognition of five main depositional units, differing in thickness from 4 m to 12 m. It also permitted detailed sampling for plant macrofossils and microfossils throughout the succession. Several approaches are integrated to re-assess the taphonomy and preservation of these exceptional plant fossils. Key Results. The deposits are rich in taxonomically diverse miospores and in toto contain at least six well-developed compression floras, together with two beds yielding nodules that enclose well-researched anatomically preserved plants permineralised in calcite. Bulk geochemistry shows that the upper nodules formed by migration of Ca with subordinate Mn and Na. Some phylogenetically important plant fossils recovered in the early 20th century have been traced to their source horizons. Trends in relative proportions of macrofossil and microfossil taxa through the sequence are only moderately congruent, perhaps reflecting the likelihood that microfossils sample the regional rather than the local flora. Conclusions. The Loch Humphrey Burn sequence encompasses a wide range of depositional

  11. Stratigraphy, palaeoenvironments and palaeoecology of the Loch Humphrey Burn lagerstätte and other Mississippian palaeobotanical localities of the Kilpatrick Hills, southwest Scotland.

    PubMed

    Bateman, Richard M; Stevens, Liadan G; Hilton, Jason

    2016-01-01

    Background and Aims. The largely Mississippian strata of the Kilpatrick Hills, located at the western end of the Scottish Midland Valley, enclose several macrofossil floras that together contain ca 21 organ-species of permineralised plants and ca 44 organ-species of compressed plants, here estimated to represent 25 whole-plant species (Glenarbuck = nine, Loch Humphrey Burn Lower = 11, Upper = seven). The most significant locality is the internationally important volcanigenic sequence that is reputedly intercalated within the Clyde Plateau Lava Formation at Loch Humphrey Burn, where ca 30 m of reworked tuffs and other clastic sediments enclose one of the world's most important terrestrial lagerstätten of this period. We here explore the palaeoecology and palaeoenvironments of the locality, and elucidate its controversial age. Methods. Repeated re-excavation of key exposures allowed recognition of five main depositional units, differing in thickness from 4 m to 12 m. It also permitted detailed sampling for plant macrofossils and microfossils throughout the succession. Several approaches are integrated to re-assess the taphonomy and preservation of these exceptional plant fossils. Key Results. The deposits are rich in taxonomically diverse miospores and in toto contain at least six well-developed compression floras, together with two beds yielding nodules that enclose well-researched anatomically preserved plants permineralised in calcite. Bulk geochemistry shows that the upper nodules formed by migration of Ca with subordinate Mn and Na. Some phylogenetically important plant fossils recovered in the early 20th century have been traced to their source horizons. Trends in relative proportions of macrofossil and microfossil taxa through the sequence are only moderately congruent, perhaps reflecting the likelihood that microfossils sample the regional rather than the local flora. Conclusions. The Loch Humphrey Burn sequence encompasses a wide range of depositional

  12. Taphonomy of fossils from the hominin-bearing deposits at Dikika, Ethiopia.

    PubMed

    Thompson, Jessica C; McPherron, Shannon P; Bobe, René; Reed, Denné; Barr, W Andrew; Wynn, Jonathan G; Marean, Curtis W; Geraads, Denis; Alemseged, Zeresenay

    2015-09-01

    Two fossil specimens from the DIK-55 locality in the Hadar Formation at Dikika, Ethiopia, are contemporaneous with the earliest documented stone tools, and they collectively bear twelve marks interpreted to be characteristic of stone tool butchery damage. An alternative interpretation of the marks has been that they were caused by trampling animals and do not provide evidence of stone tool use or large ungulate exploitation by Australopithecus-grade hominins. Thus, resolving which agents created marks on fossils in deposits from Dikika is an essential step in understanding the ecological and taphonomic contexts of the hominin-bearing deposits in this region and establishing their relevance for investigations of the earliest stone tool use. This paper presents results of microscopic scrutiny of all non-hominin fossils collected from the Hadar Formation at Dikika, including additional fossils from DIK-55, and describes in detail seven assemblages from sieved surface sediment samples. The study is the first taphonomic description of Pliocene fossil assemblages from open-air deposits in Africa that were collected without using only methods that emphasize the selective retention of taxonomically-informative specimens. The sieved assemblages show distinctive differences in faunal representation and taphonomic modifications that suggest they sample a range of depositional environments in the Pliocene Hadar Lake Basin, and have implications for how landscape-based taphonomy can be used to infer past microhabitats. The surface modification data show that no marks on any other fossils resemble in size or shape those on the two specimens from DIK-55 that were interpreted to bear stone tool inflicted damage. A large sample of marks from the sieved collections has characteristics that match modern trampling damage, but these marks are significantly smaller than those on the DIK-55 specimens and have different suites of characteristics. Most are not visible without magnification

  13. Experimental taphonomy of giant sulphur bacteria: implications for the interpretation of the embryo-like Ediacaran Doushantuo fossils.

    PubMed

    Cunningham, J A; Thomas, C-W; Bengtson, S; Marone, F; Stampanoni, M; Turner, F R; Bailey, J V; Raff, R A; Raff, E C; Donoghue, P C J

    2012-05-07

    The Ediacaran Doushantuo biota has yielded fossils interpreted as eukaryotic organisms, either animal embryos or eukaryotes basal or distantly related to Metazoa. However, the fossils have been interpreted alternatively as giant sulphur bacteria similar to the extant Thiomargarita. To test this hypothesis, living and decayed Thiomargarita were compared with Doushantuo fossils and experimental taphonomic pathways were compared with modern embryos. In the fossils, as in eukaryotic cells, subcellular structures are distributed throughout cell volume; in Thiomargarita, a central vacuole encompasses approximately 98 per cent cell volume. Key features of the fossils, including putative lipid vesicles and nuclei, complex envelope ornament, and ornate outer vesicles are incompatible with living and decay morphologies observed in Thiomargarita. Microbial taphonomy of Thiomargarita also differed from that of embryos. Embryo tissues can be consumed and replaced by bacteria, forming a replica composed of a three-dimensional biofilm, a stable fabric for potential fossilization. Vacuolated Thiomargarita cells collapse easily and do not provide an internal substrate for bacteria. The findings do not support the hypothesis that giant sulphur bacteria are an appropriate interpretative model for the embryo-like Doushantuo fossils. However, sulphur bacteria may have mediated fossil mineralization and may provide a potential bacterial analogue for other macroscopic Precambrian remains.

  14. Experimental taphonomy of giant sulphur bacteria: implications for the interpretation of the embryo-like Ediacaran Doushantuo fossils

    PubMed Central

    Cunningham, J. A.; Thomas, C.-W.; Bengtson, S.; Marone, F.; Stampanoni, M.; Turner, F. R.; Bailey, J. V.; Raff, R. A.; Raff, E. C.; Donoghue, P. C. J.

    2012-01-01

    The Ediacaran Doushantuo biota has yielded fossils interpreted as eukaryotic organisms, either animal embryos or eukaryotes basal or distantly related to Metazoa. However, the fossils have been interpreted alternatively as giant sulphur bacteria similar to the extant Thiomargarita. To test this hypothesis, living and decayed Thiomargarita were compared with Doushantuo fossils and experimental taphonomic pathways were compared with modern embryos. In the fossils, as in eukaryotic cells, subcellular structures are distributed throughout cell volume; in Thiomargarita, a central vacuole encompasses approximately 98 per cent cell volume. Key features of the fossils, including putative lipid vesicles and nuclei, complex envelope ornament, and ornate outer vesicles are incompatible with living and decay morphologies observed in Thiomargarita. Microbial taphonomy of Thiomargarita also differed from that of embryos. Embryo tissues can be consumed and replaced by bacteria, forming a replica composed of a three-dimensional biofilm, a stable fabric for potential fossilization. Vacuolated Thiomargarita cells collapse easily and do not provide an internal substrate for bacteria. The findings do not support the hypothesis that giant sulphur bacteria are an appropriate interpretative model for the embryo-like Doushantuo fossils. However, sulphur bacteria may have mediated fossil mineralization and may provide a potential bacterial analogue for other macroscopic Precambrian remains. PMID:22158954

  15. The taphonomy of blood components in decomposing bone and its relevance to physical anthropology.

    PubMed

    Cappella, Annalisa; Bertoglio, Barbara; Castoldi, Elisa; Maderna, Emanuela; Di Giancamillo, Alessia; Domeneghini, Cinzia; Andreola, Salvatore; Cattaneo, Cristina

    2015-12-01

    The variation and persistence of blood components, in particular red blood cells (RBCs), within bone tissue during the decomposition process, especially at the early stages and in different taphonomic conditions, has never been thoroughly investigated, regardless of the fact that knowing how blood survives or degrades within bone could be of help in solving many anthropological issues, such as trauma analysis and interpretation. This research investigated the influence of time and taphonomy on the persistence and detectability of blood components in parietal bone fragments (of different post mortem periods and taphonomic conditions) through histological (Hematoxilin and Eosin, HE) and immunohistochemical (Glycophorin A, GYPA) analyses. The immunohistochemical investigation for GYPA showed the presence of RBCs under the form of erythrocyte debris or residues otherwise morphologically unidentifiable using only HE staining. Hence, while well-defined RBCs can be observed only in the first week of decomposition, afterward these structures can be detectable with certainty only by immunohistochemical analysis, which reveals discrete quantities of RBC residues also in dry bone (post mortem interval, or PMI, of 15 years), but not in archaeological samples, in which the greater PMI and the different taphonomic conditions together could be the answer behind such difference. This study highlights the usefulness and potential of immunohistochemical detection of GYPA in RBC investigation and gives a realistic idea of the persistence and detectability of erythrocytes in different osteological taphonomic conditions, in contrast to results reported by some authors in literature. Another important result concerns the detection of RBC residues in dry bone, which opens the way to the possible use of RBCs in trauma interpretation. © 2015 Wiley Periodicals, Inc.

  16. Palaeoenvironment and Its Control on the Formation of Miocene Marine Source Rocks in the Qiongdongnan Basin, Northern South China Sea

    PubMed Central

    Li, Wenhao; Zhang, Zhihuan; Wang, Weiming; Lu, Shuangfang; Li, Youchuan; Fu, Ning

    2014-01-01

    The main factors of the developmental environment of marine source rocks in continental margin basins have their specificality. This realization, in return, has led to the recognition that the developmental environment and pattern of marine source rocks, especially for the source rocks in continental margin basins, are still controversial or poorly understood. Through the analysis of the trace elements and maceral data, the developmental environment of Miocene marine source rocks in the Qiongdongnan Basin is reconstructed, and the developmental patterns of the Miocene marine source rocks are established. This paper attempts to reveal the hydrocarbon potential of the Miocene marine source rocks in different environment and speculate the quality of source rocks in bathyal region of the continental slope without exploratory well. Our results highlight the palaeoenvironment and its control on the formation of Miocene marine source rocks in the Qiongdongnan Basin of the northern South China Sea and speculate the hydrocarbon potential of the source rocks in the bathyal region. This study provides a window for better understanding the main factors influencing the marine source rocks in the continental margin basins, including productivity, preservation conditions, and the input of terrestrial organic matter. PMID:25401132

  17. PREFACE: 1st METECH workshop - From deep-sea to coastal zones: Methods and Techniques for studying Palaeoenvironments

    NASA Astrophysics Data System (ADS)

    Veiga-Pires, C.; St-Onge, G.

    2008-10-01

    Reconstructing past climate and past ocean circulation demands the highest possible precision and accuracy which urges the scientific community to look at different sediment records such as the ones from coastal zones to deep-sea with a more complete set of technical and methodological tools. However, the information given by each tool varies in precision, accuracy and in significance according to their environmental settings. It is therefore essential to compare tools. With that in mind, and as part of the International year of Planet Earth, a workshop entitled `From deep-sea to coastal zones: Methods and Techniques for studying palaeoenvironments' took place in Faro (Portugal), from 25-29 February 2008 in order to: present several methods and techniques that can be used for studying sediments from deep-sea to coastal zones, namely for reconstructing palaeoenvironments in order to document past climatic changes and short to long-term environmental processes; allow cross experience between different fields and specialties, either from deep-sea to coastal zones or from micropaleontology to geochemistry; give the opportunity to students from different universities and countries to attend the workshop; publish a special volume on the presented methods and techniques during the workshop. The workshop was organized in four non-parallel sessions dealing with the use of micropaleontology, isotopes, biogeochemistry and sedimentology, as tools for palaeoenvironmental studies. The present IOP Conference Series: Earth and Environmental Science proceedings reflect this organization and papers are published in each theme. The papers are either short reviews or case studies and are highlighted below. The remains of microorganisms found in sediments are the main proxies used in micropaleontological studies. However, the link between fossilized remains and their living origin is not easy to reconstruct only based on the geologic/sedimentary record. Accordingly, Barbosa presents a

  18. Soil and sediments micromorphology: reconstruction of palaeoenvironments, anthropogenic processes, or more recent human impact on ecosystems

    NASA Astrophysics Data System (ADS)

    Gérard, Martine; Trombino, Luca; Stoops, Georges

    2014-05-01

    Soils and sediments registered the environmental changes in time and space, but also display components inherited from human activities, both in archaeological and in modern times. Micromorphological investigations carried out on undisturbed samples of soil and sediments by microscopic and ultramicroscopic techniques, correlated with mineralogy, geochemistry or biology, allow us to interpret the processes behind the formation of regoliths, sediments and anthropogenic deposits, from which a relative chronology, specific environmental conditions and/or extent of human impact may be deduced. The traditional optical microscopy observations, carried on the thin section groundmass and pedofeatures, provide clues on the different processes behind soils and sediments genesis (weathering, supergene, low T hydrothermal, anthropogenic) and their impact on ecosystems or on palaeoenvironments. In more recent times, the improvements in electron microscope imaging technology permit to make detailed observations up to the nanoscale, opening a new domain of observations to micromorphologists, both as regard of the micromass and of the thinner pedofeatures. Moreover, the optimisation of the microgeochemical mapping techniques, with spatially resolved chemical, isotopic or mineralogical analyses, is another powerful tool to gain insight in chemical migration fronts: the limit of the original rock fabric disappearance may be bypassed. In order to illustrate micromorphological researches in natural and man-influenced ecosystems, and to combine researches at different scales, several optical and electronic images of soils and sediments groundmass, associated to their microgeochemical characteristics will be presented, with selected examples taken from the climatic record of paleosols, the impact of hydrothermal alteration on saprolites, the neo-formation of minerals related to weathering process evolution, the protosoil formation in natural and human waste deposits, and the forensic

  19. The Northern Apennines palynological record as a contribute for the reconstruction of the Messinian palaeoenvironments

    NASA Astrophysics Data System (ADS)

    Bertini, Adele

    2006-06-01

    The Messinian stage has long been associated with an overall warm and dry climate whereas recent researches indicate either a warm and humid or a cool and dry climate. The integrated stratigraphic record of vegetation and climatic changes from Northern Apennines sites provides the solution to this apparent contradiction. Its integration with the updated geological and sedimentological studies provides additional data for the reconstruction of the depositional palaeoenvironments in both marginal and deeper sub-basins of the Apennines foredeep. The onset of the Mediterranean salinity crisis (MSC) is recorded in the Gessoso-Solfifera of the Vena del Gesso (marginal sub-basin). Cyclical humid conditions, corresponding to precession minima, developed during the deposition of the shales interbedded with the gypsum (5.9 to 5.6 Ma); some cooler events took also place under the effects of global (glacial stadials) and regional factors (Apennines uplift). At present no major changes from moist to dry conditions are attested to just before the salinity crisis, as well as in Sicily. So climate did not play a major role in the onset of the MSC despite the favourable context provided by inferred thermo-xeric conditions in southern Italy. A drier episode indicated by the expansion of the open vegetation including the northward migration of Lygeum postdates the onset of the salinity crisis of about 400 kyr, in the lower post-evaporitic deposits of Maccarone (deeper sub-basin). It falls within a period of global warming whereas at a regional scale it could correlate p.p. to the evaporite deposition in deeper basins and to hiatuses in the marginal basins of Sicily and of the western sector of Northern Apennines. Its sudden end, about 100 kyr later, in coincidence with a significant increase of Pinaceae, indicates a turnover in the terrestrial setting not linked to major climate changes but possibly to a complex interaction between other palaeoenvironmental factors (e.g., tectonics

  20. Investigating the stratigraphy and palaeoenvironments for a suite of newly discovered mid-Cretaceous vertebrate fossil-localities in the Winton Formation, Queensland, Australia

    NASA Astrophysics Data System (ADS)

    Tucker, Ryan T.; Roberts, Eric M.; Darlington, Vikie; Salisbury, Steven W.

    2017-08-01

    The Winton Formation of central Queensland is recognized as a quintessential source of mid-Cretaceous terrestrial faunas and floras in Australia. However, sedimentological investigations linking fossil assemblages and palaeoenvironments across this unit remain limited. The intent of this study was to interpret depositional environments and improve stratigraphic correlations between multiple fossil localities within the preserved Winton Formation in the Eromanga Basin, including Isisford, Lark Quarry, and Bladensburg National Park. Twenty-three facies and six repeated facies associations were documented, indicating a mosaic of marginal marine to inland alluvial depositional environments. These developed synchronously with the final regression of the Eromanga Seaway from central Australia during the late Albian-early Turonian. Investigations of regional- and local-scale structural features and outcrop, core and well analysis were combined with detrital zircon provenance signatures to help correlate stratigraphy and vertebrate faunas across the basin. Significant palaeoenvironmental differences exist between the lower and upper portions of the preserved Winton Formation, warranting informal subdivisions; a lower tidally influenced fluvial-deltaic member and an upper inland alluvial member. This work further demonstrates that the Isisford fauna is part of the lower member of the preserved Winton Formation; whereas, fossil localities around Winton, including Lark Quarry and Bladensburg National Park, are part of the upper member of the Winton Formation. These results permit a more meaningful framework for both regional and global comparisons of the Winton flora and fauna.

  1. The Cenozoic palaeoenvironment of the Arctic Ocean

    USGS Publications Warehouse

    Moran, K.; Backman, J.; Brinkhuis, H.; Clemens, S.C.; Cronin, T.; Dickens, G.R.; Eynaud, F.; Gattacceca, J.; Jakobsson, M.; Jordan, R.W.; Kaminski, M.; King, J.; Koc, N.; Krylov, A.; Martinez, N.; Matthiessen, J.; McInroy, D.; Moore, T.C.; Onodera, J.; O'Regan, M.; Palike, H.; Rea, B.; Rio, D.; Sakamoto, T.; Smith, D.C.; Stein, R.; St, John K.; Suto, I.; Suzuki, N.; Takahashi, K.; Watanabe, M. E.; Yamamoto, M.; Farrell, J.; Frank, M.; Kubik, P.; Jokat, W.; Kristoffersen, Y.

    2006-01-01

    The history of the Arctic Ocean during the Cenozoic era (0-65 million years ago) is largely unknown from direct evidence. Here we present a Cenozoic palaeoceanographic record constructed from >400 m of sediment core from a recent drilling expedition to the Lomonosov ridge in the Arctic Ocean. Our record shows a palaeoenvironmental transition from a warm 'greenhouse' world, during the late Palaeocene and early Eocene epochs, to a colder 'icehouse' world influenced by sea ice and icebergs from the middle Eocene epoch to the present. For the most recent ???14 Myr, we find sedimentation rates of 1-2 cm per thousand years, in stark contrast to the substantially lower rates proposed in earlier studies; this record of the Neogene reveals cooling of the Arctic that was synchronous with the expansion of Greenland ice (???3.2 Myr ago) and East Antarctic ice (???14 Myr ago). We find evidence for the first occurrence of ice-rafted debris in the middle Eocene epoch (???45 Myr ago), some 35 Myr earlier than previously thought; fresh surface waters were present at ???49 Myr ago, before the onset of ice-rafted debris. Also, the temperatures of surface waters during the Palaeocene/Eocene thermal maximum (???55 Myr ago) appear to have been substantially warmer than previously estimated. The revised timing of the earliest Arctic cooling events coincides with those from Antarctica, supporting arguments for bipolar symmetry in climate change. ?? 2006 Nature Publishing Group.

  2. Integrated palaeoenvironmental reconstruction of a Lower Pleistocene section (Sousaki basin, Northeastern Corinth Gulf): using fuzzy logic to decipher long term palaeoenvironmental changes.

    NASA Astrophysics Data System (ADS)

    Papadopoulou, Pinelopi; Iliopoulos, George; Koukouvelas, Ioannis; Rentoumi, Evaggelia; Groumpos, Peter

    2017-04-01

    Palaeoecological analyses are important tools for the reconstruction of palaeoenvironmental changes. In this paper microfossil assemblages (ostracodes and palynomorphs) of Lower Pleistocene age, are used to reconstruct the biological and physical conditions of the palaeoenvironment during a time interval when palaeoclimatic and palaeoecological data from the Balkan Peninsula are scarce. Lower Pleistocene is an epoch when major changes in the palaeoclimate occurred (commencement of the Quaternary glaciations) affecting the palaeoenvironments worldwide. The studied section, geotectonically belongs to the Northeastern Corinth gulf, and lies near the town Ag. Theodoroi, west of Athens, consisting of alterations of marls and marly limestones with intercalations of organic rich sediments and gypsum beds. Detailed logging of the section was carried out and 76 samples were collected for micropalaeontological analysis. Additionally, 22 samples were studied for their palynological content. The results were statistically processed using standard palaeoecological methods (percentage abundance diagrams, biodiversity indices and multivariate analysis). Our interpretation was further supported by fuzzy logic methods, in order to remove subjectivity from the biostratigraphical data providing a higher degree of detail. Despite this though, their use in geology remains limited until now. In our case study, fuzzy sets examine the data from a more general perspective and contain natural variations that are present in species abundance gradients between evolving environments. The lithological and micropalaeontological analysis revealed a brackish lagoonal environment dominated by the typical brackish ostracode species Cyprideis torosa. The studied sequence shows cyclically changing subenvironments fluctuating from the outer to the inner zone of a lagoon as imposed by the alternating occurrence of the ostracode families Tyrrhenocytheridae and Candonidae and the foraminifera species A

  3. The Eagle Ford Shale, Texas: an initial insight into Late Cretaceous organic-rich mudrock palaeoenvironments

    NASA Astrophysics Data System (ADS)

    Forshaw, Joline; Jarvis, Ian; Trabucho-Alexandre, João; Tocher, Bruce; Pearce, Martin

    2014-05-01

    , making further study essential before these resources can be fully developed. Therefore, a thorough understanding of the subsurface sediments within a coherent stratigraphic framework is required before exploitation can be optimimised. Here, we present initial palynological data (dinoflagellate cyst abundance), in conjunction with geochemistry, from material obtained from the Maverick Basin in the southwestern area of Eagle Ford Shale deposition. Results are presented as part of a wider study of the Eagle Ford Shale, utilising both core and outcrop material, that is using dinoflagellate cysts and chemostratigraphy to develop an improved stratigraphic framework and to reconstruct depositional palaeoenvironments in the basin.

  4. Declining occurrence and low colonization probability in freshwater mussel assemblages: A dynamic occurrence modeling approach

    USGS Publications Warehouse

    Pandolfo, Tamara J.; Kwak, Thomas J.; Cope, W. Gregory; Heise, Ryan J.; Nichols, Robert B.; Pacifici, Krishna

    2017-01-01

    Mussel monitoring data are abundant, but methods for analyzing long-term trends in these data are often uninformative or have low power to detect changes. We used a dynamic occurrence model, which accounted for imperfect species detection in surveys, to assess changes in species occurrence in a longterm data set (1986–2011) for the Tar River basin of North Carolina, USA. Occurrence of all species decreased steadily over the time period studied. Occurrence in 1986 ranged from 0.19 for Utterbackia imbecillis to 0.60 for Fusconaia masoni. Occurrence in 2010–2011 ranged from 0.10 for Lampsilis radiata to 0.40 for F. masoni. The maximum difference between occurrence in 1986 and 2011 was a decline of 0.30 for Alasmidonta undulata. Mean persistence for all species was high (0.97, 95% CI ¼ 0.95–0.99); however, mean colonization probability was very low (,0.01, 95% CI ¼ ,0.01–0.01). These results indicate that mussels persisted at sites already occupied but that they have not colonized sites where they had not occurred previously. Our findings highlight the importance of modeling approaches that incorporate imperfect detection in estimating species occurrence and revealing temporal trends to inform conservation planning.

  5. An Index to PGE-Ni-Cr Deposits and Occurrences in Selected Mineral-Occurrence Databases

    USGS Publications Warehouse

    Causey, J. Douglas; Galloway, John P.; Zientek, Michael L.

    2009-01-01

    Databases of mineral deposits and occurrences are essential to conducting assessments of undiscovered mineral resources. In the USGS's (U.S. Geological Survey) global assessment of undiscovered resources of copper, potash, and the platinum-group elements (PGE), only a few mineral deposit types will be evaluated. For example, only porphyry-copper and sediment-hosted copper deposits will be considered for the copper assessment. To support the global assessment, the USGS prepared comprehensive compilations of the occurrences of these two deposit types in order to develop grade and tonnage models and delineate permissive areas for undiscovered deposits of those types. This publication identifies previously published databases and database records that describe PGE, nickel, and chromium deposits and occurrences. Nickel and chromium were included in this overview because of the close association of PGE with nickel and chromium mineralization. Users of this database will need to refer to the original databases for detailed information about the deposits and occurrences. This information will be used to develop a current and comprehensive global database of PGE deposits and occurrences.

  6. Lineaments and Mineral Occurrences in Pennsylvania

    NASA Technical Reports Server (NTRS)

    Mcmurtry, G. J.; Petersen, G. W. (Principal Investigator); Kowalik, W. S.; Gold, D. P.

    1975-01-01

    The author has identified the following significant results. A conservative lineament map of Pennsylvania interpreted from ERTS-1 channel 7 (infrared) imagery and Skylab photography was compared with the distribution of known metallic mines and mineral occurrences. Of 383 known mineral occurrences, 116 show a geographical association to 1 km wide lineaments, another 24 lie at the intersection of two lineaments, and one lies at the intersection of three lineaments. The Perkiomen Creek lineament in the Triassic Basin is associated with 9 Cu-Fe occurrences. Six Pb-Zn occurrences are associated with the Tyrone-Mount Union lineament. Thirteen other lineaments are associated with 3, 4, or 5 mineral occurrences each.

  7. Occurrence and distribution of Indian primates

    USGS Publications Warehouse

    Karanth, K.K.; Nichols, J.D.; Hines, J.E.

    2010-01-01

    Global and regional species conservation efforts are hindered by poor distribution data and range maps. Many Indian primates face extinction, but assessments of population status are hindered by lack of reliable distribution data. We estimated the current occurrence and distribution of 15 Indian primates by applying occupancy models to field data from a country-wide survey of local experts. We modeled species occurrence in relation to ecological and social covariates (protected areas, landscape characteristics, and human influences), which we believe are critical to determining species occurrence in India. We found evidence that protected areas positively influence occurrence of seven species and for some species are their only refuge. We found evergreen forests to be more critical for some primates along with temperate and deciduous forests. Elevation negatively influenced occurrence of three species. Lower human population density was positively associated with occurrence of five species, and higher cultural tolerance was positively associated with occurrence of three species. We find that 11 primates occupy less than 15% of the total land area of India. Vulnerable primates with restricted ranges are Golden langur, Arunachal macaque, Pig-tailed macaque, stump-tailed macaque, Phayre's leaf monkey, Nilgiri langur and Lion-tailed macaque. Only Hanuman langur and rhesus macaque are widely distributed. We find occupancy modeling to be useful in determining species ranges, and in agreement with current species ranking and IUCN status. In landscapes where monitoring efforts require optimizing cost, effort and time, we used ecological and social covariates to reliably estimate species occurrence and focus species conservation efforts. ?? Elsevier Ltd.

  8. Reconstruction of the Palaeo-environment of the Alluvial Deposits in the Eastern Free State, South Africa

    NASA Astrophysics Data System (ADS)

    Evans, M. Y.

    2009-04-01

    Small alluvial fan systems have formed off the hillslopes of the remnant Karoo koppies at Heelbo in the Eastern Free State, South Africa. The landform geometry is a result of complex relationships between climate, lithology, structure and vegetation. This research area, which includes a large mammal mass death site, potentially contains a wealth of palaeo-environmental and specifically palaeoclimatic information. Palaeo-environmental information and proxy records on past climates in southern Africa has traditionally been obtained from a variety of techniques including stable isotope analysis of speleothems, pollen , faunal analyses at archeological sites, animal remains and crater-lake sediments (see references below). However, little information exists in the scientific literature on the use of palaeosols for defining the depositional palaeoenvironments in southern Africa. The aim of this research is to attempt to address the lack of palaeo-environmental information by extracting palaeoclimatic information from the sedimentary processes and the palaeosols at the Heelbo farm that have been extensively exposed through gullying. The sedimentary fans in the area have experienced climatically controlled histories of erosion, sedimentation and pedogenesis. Extreme sedimentation is assumed to have occurred during relatively arid climatic intervals, when decreased vegetation cover provided little surface protection. In contrast pedogenesis occurs during humid intervals when vegetation cover is restored, the land stabilizes and the uppermost gravely sands weather to form soils. A combined approach of both radiocarbon- and luminescence -dating may provide a detailed chronology of these successive hillslope events in order to relate hillslope instability to climatic forcing factors. Preliminary results indicate that at least 3 depositional events are recorded within the large mammal mass death site, which have been confirmed by the radiocarbon dates of 3,610 ±110 in the top

  9. UMTRA project list of reportable occurrences

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1994-04-01

    This UMTRA Project List of Reportable occurrences is provided to facilitate efficient categorization of reportable occurrences. These guidelines have been established in compliance with DOE minimum reporting requirements under DOE Order 5000.3B. Occurrences are arranged into nine groups relating to US Department of Energy (DOE) Uranium Mill Tailings Remedial Action (UMTRA) Project operations for active sites. These nine groupings are provided for reference to determined whether an occurrence meets reporting requirement criteria in accordance with the minimum reporting requirements. Event groups and significance categories that cannot or will not occur, and that do not apply to UMTRA Project operations, aremore » omitted. Occurrence categorization shall be as follows: Group 1. Facility Condition; Group 2. Environmental; Group 3. Personnel Safety; Group 4. Personnel Radiation Protection; Group 5. Safeguards and Security; Group 6. Transportation; Group 7. Value Basis Reporting; Group 8. Facility Status; and Group 9. Cross-Category Items.« less

  10. Can phytoliths and lipid biomarkers constrain and refine isotopic palaeoclimatic reconstructions? Insights from the Homa Peninsula, western Kenya

    NASA Astrophysics Data System (ADS)

    Vincent, Thomas; Whitfield, Elizabeth; Bishop, Laura; Plummer, Thomas; Ditchfield, Peter; Blumenthal, Scott; Finestone, Emma; Kiriakoulakis, Kostas

    2017-04-01

    Several archaeological sites on the Homa Peninsula, western Kenya, host Plio-Pleistocene sedimentary sequences that contain hominin archaeological traces and faunal remains. As a result, the region preserves rare palaeoanthropological information of a crucial time period in East Africa. By reconstructing the palaeoenvironmental substrate here, a deeper understanding of hominin activities and behaviour in variable landscapes will be gained. This is the aim of the current research, which utilises a multiproxy approach to reconstruct the palaeoenvironment, encompassing analyses of particle size, phytoliths and lipid biomarkers. Previous work at the most extensively studied site on the peninsula, Kanjera South, has shown sediments containing archaeological occurrences to be ca. 2 Ma in age. Reconstructions of the palaeoenvironment here have largely been based on field investigations and isotopic analysis of pedogenic/palaeosol carbonates and tooth enamel, which revealed clear evidence of a grassland setting (>75% C4 vegetation). However, in order to form robust and reliable reconstructions of palaeoclimate, information derived from a single proxy is insufficient. For example, the prolonged and seasonally biased formation of pedogenic carbonates can mask seasonal fluctuations in vegetation, causing variable environmental settings to be overlooked when using isotope data from this source. Soil organic matter offers another source of isotope data, however 13C enrichment from plant carbon may also introduce uncertainty here. Resultantly, due to the significance of the site, it is essential that reconstructions of the palaeoclimate, palaeovegetation and palaeoenvironment as a whole are robust and reliable, and so multiproxy evidence is essential. Here, we present the use of phytoliths and lipid biomarkers to provide further insights into the C3/C4 vegetation distribution on the peninsula, and consequently act as proxies for palaeoclimate and palaeovegetation. Both

  11. Carboniferous Psammichnites: Systematic re-evaluation, taphonomy and autecology

    USGS Publications Warehouse

    Mángano, M. Gabriela; Rindsberg, Andrew K.

    2002-01-01

    Carboniferous tidal-flat Psammichnites. A first distributional pattern consists of guided meandering specimens preserved in ripple troughs, probably reflecting food-searching of buried organic matter concentrated in troughs. A second is recorded by concentration of Psammichnites on ripple crests and slopes. In some cases, the course is almost straight to slightly sinuous and closely follows topographic highs, suggesting a direct control of bedform morphology on trace pattern. Occurrences of Carboniferous Psammichnites most likely represent an opportunistic strategy in marginal-marine settings. Analysis of Carboniferous Psammichnites indicates the presence of a siphon-like device in the producer and reestablishes the possibility of a molluscan tracemaker.

  12. OCCURRENCE AND EXPOSURE ASSESSMENT FOR THE ...

    EPA Pesticide Factsheets

    Describes the occurrence of Cryptosporidium and other pathogens in the raw and finished water of public water systems (PWS) based on modeling of source water survey data. Analysis of microbial occurrence data to support LT2ESWTR microbial risk assessment

  13. The Occurrence Rate of Hot Jupiters

    NASA Astrophysics Data System (ADS)

    Rampalli, Rayna; Catanzarite, Joseph; Batalha, Natalie M.

    2017-01-01

    As the first kind of exoplanet to be discovered, hot Jupiters have always been objects of interest. Despite being prevalent in radial velocity and ground-based surveys, they were found to be much rarer based on Kepler observations. These data show a pile-up at radii of 9-22 Rearth and orbital periods of 1-10 days. Computing accurate occurrence rates can lend insight into planet-formation and migration-theories. To get a more accurate look, the idea of reliability was introduced. Each hot Jupiter candidate was assigned a reliability based on its location in the galactic plane and likelihood of being a false positive. Numbers were updated if ground-based follow-up indicated a candidate was indeed a false positive. These reliabilities were introduced into an occurrence rate calculation and yielded about a 12% decrease in occurrence rate for each period bin examined and a 25% decrease across all the bins. To get a better idea of the cause behind the pileup, occurrence rates based on parent stellar metallicity were calculated. As expected from previous work, higher metallicity stars yield higher occurrence rates. Future work includes examining period distributions in both the high metallicity and low metallicity sample for a better understanding and confirmation of the pile-up effect.

  14. Tectonic implications of Archean anorthosite occurrences

    NASA Technical Reports Server (NTRS)

    Phinney, W. C.; Morrison, D. A.; Maczuga, D. E.

    1988-01-01

    The occurrences of megacrystic anorthosite and basalt in a variety of geologic settings were reviewed and it was found that these rock types occur in a variety of tectonic settings. Anorthosites and megacrystic basalts are petrogenetically related and are found in oceanic volcanic crust, cratons, and shelf environments. Although megacrystic basalts are most common in Archean terranes, similar occurrences are observed in rocks of early Proterozoic age, and even in young terranes such as the Galapagos hotspot. Based on inferences from experimental petrology, all of the occurrences are apparently associated with similar parental melts that are relatively Fe-rich tholeiites. The megacrystic rocks exhibit a two- (or more)-stage development of plagioclase, with the megacrysts having relatively uniform composition produced under nearly isothermal and isochemical conditions over substantial periods of time. The anorthosites appear to have intruded various crustal levels from very deep to very shallow. The petrogenetic indicators, however, suggest that conditions of formation of the Precambrian examples were different from Phanerozoic occurrences.

  15. Biogeographical Analysis of Chemical Co-Occurrence Data to ...

    EPA Pesticide Factsheets

    A challenge with multiple chemical risk assessment is the need to consider the joint behavior of chemicals in mixtures. To address this need, pharmacologists and toxicologists have developed methods over the years to evaluate and test chemical interaction. In practice, however, testing of chemical interaction more often comprises ad hoc binary combinations and rarely examines higher order combinations. One explanation for this practice is the belief that there are simply too many possible combinations of chemicals to consider. Indeed, under stochastic conditions the possible number of chemical combinations scales geometrically as the pool of chemicals increases. However, the occurrence of chemicals in the environment is determined by factors, economic in part, which favor some chemicals over others. We investigate methods from the field of biogeography, originally developed to study avian species co-occurrence patterns, and adapt these approaches to examine chemical co-occurrence. These methods were applied to a national survey of pesticide residues in 168 child care centers from across the country. Our findings show that pesticide co-occurrence in the child care center was not random but highly structured, leading to the co-occurrence of specific pesticide combinations. Thus, ecological studies of species co-occurrence parallel the issue of chemical co-occurrence at specific locations. Both are driven by processes that introduce structure in the pattern of co-o

  16. Demonstrating microbial co-occurrence pattern analyses within and between ecosystems

    PubMed Central

    Williams, Ryan J.; Howe, Adina; Hofmockel, Kirsten S.

    2014-01-01

    Co-occurrence patterns are used in ecology to explore interactions between organisms and environmental effects on coexistence within biological communities. Analysis of co-occurrence patterns among microbial communities has ranged from simple pairwise comparisons between all community members to direct hypothesis testing between focal species. However, co-occurrence patterns are rarely studied across multiple ecosystems or multiple scales of biological organization within the same study. Here we outline an approach to produce co-occurrence analyses that are focused at three different scales: co-occurrence patterns between ecosystems at the community scale, modules of co-occurring microorganisms within communities, and co-occurring pairs within modules that are nested within microbial communities. To demonstrate our co-occurrence analysis approach, we gathered publicly available 16S rRNA amplicon datasets to compare and contrast microbial co-occurrence at different taxonomic levels across different ecosystems. We found differences in community composition and co-occurrence that reflect environmental filtering at the community scale and consistent pairwise occurrences that may be used to infer ecological traits about poorly understood microbial taxa. However, we also found that conclusions derived from applying network statistics to microbial relationships can vary depending on the taxonomic level chosen and criteria used to build co-occurrence networks. We present our statistical analysis and code for public use in analysis of co-occurrence patterns across microbial communities. PMID:25101065

  17. No association of moon phase with stroke occurrence.

    PubMed

    Ruuskanen, Jori O; Sipilä, Jussi O T; Rautava, Päivi; Kytö, Ville

    2018-05-23

    Stroke occurrence shows strong correlations with sleep disorders and even subtle sleep disturbances have been shown to affect ischemic stroke (IS) occurrence. Chronobiology also exerts effects, like the morning surge in IS occurrence. Lunar cycles have also been shown to affect sleep and other physiological processes, but studies on moon phases and its possible association with occurrence of stroke are rare and nonconclusive. Therefore, we studied the effects of moon phases on stroke hospitalizations and in-hospital mortality nationwide in Finland in 2004-2014. All patients aged ≥18 years with IS or intracerebral hemorrhage (ICH) as primary discharge diagnosis were included. Daily number of admissions was treated as a response variable while moon phase, year and astronomical season were independent variables in Poisson regression modeling. We found no association between moon phases and stroke occurrence. The overall occurrence rates did not vary between different moon phases for IS or ICH (p = 0.61 or higher). There were no differences between moon phases in daily admission rates among men, women, young and old patients for any of the stroke subtypes. There was no difference in in-hospital mortality with regard to moon phase for IS or ICH overall (p = 0.19 or higher), nor in subgroup analyses. There were no significant interactions between moon phase and astronomical season for stroke occurrence or in-hospital mortality. To conclude, in this over a decade-long nationwide study including a total of 46 million person years of follow-up, we found no association between moon phases and occurrence or in-hospital mortality rates of IS or intracerebral hemorrhage.

  18. Occurrence of Wounds in Nigerian Horses.

    PubMed

    Agina, Onyinyechukwu A; Ihedioha, John I

    2017-01-01

    This study investigated the occurrence of wounds in Nigerian horses. The study population was 1,621 horses sold at the Obollo Afor horse lairage in Enugu State, Nigeria, during a 6-month period: 3 months of dry season and 3 months of rainy season (February-April and June-August 2012). A total of 207 horses were systematically sampled and subjected to a comprehensive physical examination. Those with wounds were marked, recorded, and clinically examined. Of the 207 horses sampled, 21 (10.1%) had wounds. The body distribution of the wounds was 9.5% head, 9.5% forelimbs, 19.1% hind limbs, 4.8% tail, 14.3% flank, 9.5% loin, 19.1% hip, 9.5% barrel, and 4.8% croup. The occurrence of the wounds was not significantly associated with sex or season, but the occurrence in adults was significantly (p < .05) higher than that in the young and aged horses. It was concluded that the occurrence of wounds is relatively high (10.1%), and mainly the hind limbs, hip, and flank of adult horses are affected. It was recommended that horse guardians and handlers should be properly educated on the care of horses.

  19. Taphonomy of a thick Terebratula bioherm from the Pliocene of southeastern Spain

    NASA Astrophysics Data System (ADS)

    García-Ramos, Diego A.

    2015-04-01

    many of these shells were drilled by gastropods. Co-occurrence of altered fragments and articulated shells of Terebratula suggests that shells of this brachiopod underwent different taphonomic pathways, implying that different generations of Terebratula were able to thrive in this habitat over a period of time long enough to produce the range of taphonomic signatures encountered. Taphonomic traits point to a within-habitat time-averaged fossil assemblage, namely: 1) sediment starvation (on account of a dense bioturbation and abrasion, bioerosion, encrustation, and fragmentation of shells accumulated in clusters). 2) fossils with distinctly different taphonomic signatures corresponding to the biostratinomic phase. 3) lithologically homogeneous matrix. 4) a functional agreement between fauna and matrix. The occurrence of fixossesile organisms such as Pododesmus, Ancistrocrania and the abundance of Podichnus (which suggests that Terebratula attached to dead and alive conspecific shells) and other bioerosive traces, point out a shift from a soft/firmground to a shelly-ground propitious for the colonization by diverse epilithic animals. These features are consistent with autigenic and allogenic taphonomic feedback. Allogenic mode is suggested by reworking and winnowing by storm currents. The influence of storms is also recorded by unaltered, hollow shells of Terebratula (rapid burial), the stacked biofabrics, and the infilling of pod-like pits by shell fragments.

  20. 21 CFR 1002.20 - Reporting of accidental radiation occurrences.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Reporting of accidental radiation occurrences... SERVICES (CONTINUED) RADIOLOGICAL HEALTH RECORDS AND REPORTS Manufacturers' Reports on Accidental Radiation Occurrences § 1002.20 Reporting of accidental radiation occurrences. (a) Manufacturers of electronic products...

  1. 21 CFR 1002.20 - Reporting of accidental radiation occurrences.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Reporting of accidental radiation occurrences... SERVICES (CONTINUED) RADIOLOGICAL HEALTH RECORDS AND REPORTS Manufacturers' Reports on Accidental Radiation Occurrences § 1002.20 Reporting of accidental radiation occurrences. (a) Manufacturers of electronic products...

  2. 21 CFR 1002.20 - Reporting of accidental radiation occurrences.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Reporting of accidental radiation occurrences... SERVICES (CONTINUED) RADIOLOGICAL HEALTH RECORDS AND REPORTS Manufacturers' Reports on Accidental Radiation Occurrences § 1002.20 Reporting of accidental radiation occurrences. (a) Manufacturers of electronic products...

  3. THE OCCURRENCE OF DISINFECTION BY-PRODUCTS OF HEALTH CONCERN IN DRINKING WATER: RESULTS OF A NATIONWIDE DBP OCCURRENCE STUDY

    EPA Science Inventory

    The motivation for this Nationwide Disinfection By-product (DBP) Occurrence Study was two-fold: First, more than 500 DBPs have been reported in the literature, yet there is almost no quantitative occurrence information for most. As a result, there is significant uncertainty ove...

  4. On the distribution of species occurrence

    USGS Publications Warehouse

    Buzas, Martin A.; Koch, Carl F.; Culver, Stephen J.; Sohl, Norman F.

    1982-01-01

    The distribution of species abundance (number of individuals per species) is well documented. The distribution of species occurrence (number of localities per species), however, has received little attention. This study investigates the distribution of species occurrence for five large data sets. For modern benthic foraminifera, species occurrence is examined from the Atlantic continental margin of North America, where 875 species were recorded 10,017 times at 542 localities, the Gulf of Mexico, where 848 species were recorded 18,007 times at 426 localities, and the Caribbean, where 1,149 species were recorded 6,684 times at 268 localities. For Late Cretaceous molluscs, species occurrence is examined from the Gulf Coast where 716 species were recorded 6,236 times at 166 localities and a subset of this data consisting of 643 species recorded 3,851 times at 86 localities.Logseries and lognormal distributions were fitted to these data sets. In most instances the logseries best predicts the distribution of species occurrence. The lognormal, however, also fits the data fairly well, and, in one instance, better. The use of these distributions allows the prediction of the number of species occurring once, twice, ..., n times.Species abundance data are also available for the molluscan data sets. They indicate that the most abundant species (greatest number of individuals) usually occur most frequently. In all data sets approximately half the species occur four or less times. The probability of noting the presence of rarely occurring species is small, and, consequently, such species must be used with extreme caution in studies requiring knowledge of the distribution of species in space and time.

  5. The Latest Succession of Dinosaur Tracksites in Europe: Hadrosaur Ichnology, Track Production and Palaeoenvironments

    PubMed Central

    Vila, Bernat; Oms, Oriol; Fondevilla, Víctor; Gaete, Rodrigo; Galobart, Àngel; Riera, Violeta; Canudo, José Ignacio

    2013-01-01

    A comprehensive review and study of the rich dinosaur track record of the Tremp Formation in the southern Pyrenees of Spain (Southwestern Europe) shows a unique succession of footprint localities prior to the end-Cretaceous mass extinction event. A description of some 30 new tracksites and data on sedimentary environments, track occurrence and preservation, ichnology and chronostratigraphy are provided. These new track localities represent various facies types within a diverse set of fluvial environments. The footprint discoveries mostly represent hadrosaurian and, less abundantly, to sauropod dinosaurs. The hadrosaur tracks are significantly smaller in size than, but morphologically similar to, those of North America and Asia and are attributable to the ichnogenus Hadrosauropodus. The track succession, with more than 40 distinct track levels, indicates that hadrosaur footprints in the Ibero-Armorican region occur predominantly in the late Maaastrichtian (at least above the early Maastrichtian–late Maastrichtian boundary). The highest abundance is found noticeably found in the late Maastrichtian, with tracks occurring in the C29r magnetochron, within about the latest 300,000 years of the Cretaceous. PMID:24019873

  6. 10 CFR 840.3 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 10 Energy 4 2012-01-01 2012-01-01 false Determination of extraordinary nuclear occurrence. 840.3 Section 840.3 Energy DEPARTMENT OF ENERGY EXTRAORDINARY NUCLEAR OCCURRENCES § 840.3 Determination of extraordinary nuclear occurrence. If the DOE determines that both of the criteria set forth in § 840.4 and § 840...

  7. 10 CFR 840.3 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 10 Energy 4 2013-01-01 2013-01-01 false Determination of extraordinary nuclear occurrence. 840.3 Section 840.3 Energy DEPARTMENT OF ENERGY EXTRAORDINARY NUCLEAR OCCURRENCES § 840.3 Determination of extraordinary nuclear occurrence. If the DOE determines that both of the criteria set forth in § 840.4 and § 840...

  8. 10 CFR 840.3 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 4 2014-01-01 2014-01-01 false Determination of extraordinary nuclear occurrence. 840.3 Section 840.3 Energy DEPARTMENT OF ENERGY EXTRAORDINARY NUCLEAR OCCURRENCES § 840.3 Determination of extraordinary nuclear occurrence. If the DOE determines that both of the criteria set forth in § 840.4 and § 840...

  9. 10 CFR 840.3 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 4 2010-01-01 2010-01-01 false Determination of extraordinary nuclear occurrence. 840.3 Section 840.3 Energy DEPARTMENT OF ENERGY EXTRAORDINARY NUCLEAR OCCURRENCES § 840.3 Determination of extraordinary nuclear occurrence. If the DOE determines that both of the criteria set forth in § 840.4 and § 840...

  10. 10 CFR 840.3 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 4 2011-01-01 2011-01-01 false Determination of extraordinary nuclear occurrence. 840.3 Section 840.3 Energy DEPARTMENT OF ENERGY EXTRAORDINARY NUCLEAR OCCURRENCES § 840.3 Determination of extraordinary nuclear occurrence. If the DOE determines that both of the criteria set forth in § 840.4 and § 840...

  11. Modeling fire occurrence as a function of landscape

    NASA Astrophysics Data System (ADS)

    Loboda, T. V.; Carroll, M.; DiMiceli, C.

    2011-12-01

    Wildland fire is a prominent component of ecosystem functioning worldwide. Nearly all ecosystems experience the impact of naturally occurring or anthropogenically driven fire. Here, we present a spatially explicit and regionally parameterized Fire Occurrence Model (FOM) aimed at developing fire occurrence estimates at landscape and regional scales. The model provides spatially explicit scenarios of fire occurrence based on the available records from fire management agencies, satellite observations, and auxiliary geospatial data sets. Fire occurrence is modeled as a function of the risk of ignition, potential fire behavior, and fire weather using internal regression tree-driven algorithms and empirically established, regionally derived relationships between fire occurrence, fire behavior, and fire weather. The FOM presents a flexible modeling structure with a set of internal globally available default geospatial independent and dependent variables. However, the flexible modeling environment adapts to ingest a variable number, resolution, and content of inputs provided by the user to supplement or replace the default parameters to improve the model's predictive capability. A Southern California FOM instance (SC FOM) was developed using satellite assessments of fire activity from a suite of Landsat and Moderate Resolution Imaging Spectroradiometer (MODIS) satellite data, Monitoring Trends in Burn Severity fire perimeters, and auxiliary geospatial information including land use and ownership, utilities, transportation routes, and the Remote Automated Weather Station data records. The model was parameterized based on satellite data acquired between 2001 and 2009 and fire management fire perimeters available prior to 2009. SC FOM predictive capabilities were assessed using observed fire occurrence available from the MODIS active fire product during 2010. The results show that SC FOM provides a realistic estimate of fire occurrence at the landscape level: the fraction of

  12. 46 CFR 326.4 - Reports of accidents and occurrences.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... 46 Shipping 8 2011-10-01 2011-10-01 false Reports of accidents and occurrences. 326.4 Section 326... MARINE PROTECTION AND INDEMNITY INSURANCE UNDER AGREEMENTS WITH AGENTS § 326.4 Reports of accidents and occurrences. The Agent shall report every accident or occurrence of a P&I nature promptly to both the Director...

  13. 46 CFR 326.4 - Reports of accidents and occurrences.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 46 Shipping 8 2010-10-01 2010-10-01 false Reports of accidents and occurrences. 326.4 Section 326... MARINE PROTECTION AND INDEMNITY INSURANCE UNDER AGREEMENTS WITH AGENTS § 326.4 Reports of accidents and occurrences. The Agent shall report every accident or occurrence of a P&I nature promptly to both the Director...

  14. Franciscan complex calera limestones: Accreted remnants of farallon plate oceanic plateaus

    USGS Publications Warehouse

    Tarduno, J.A.; McWilliams, M.; Debiche, M.G.; Sliter, W.V.; Blake, M.C.

    1985-01-01

    The Calera Limestone, part of the Franciscan Complex of northern California, may have formed in a palaeoenvironment similar to Hess and Shatsky Rises of the present north-west Pacific1. We report here new palaeomagnetic results, palaeontological data and recent plate-motion models that reinforce this assertion. The Calera Limestone may have formed on Farallon Plate plateaus, north of the Pacific-Farallon spreading centre as a counterpart to Hess or Shatsky Rises. In one model2, the plateaus were formed by hotspots close to the Farallon_Pacific ridge axis. On accretion to North America, plateau dissection in the late Cretaceous to Eocene (50-70 Myr) could explain the occurrence of large volumes of pillow basalt and exotic blocks of limestone in the Franciscan Complex. Partial subduction of the plateaus could have contributed to Laramide (70-40 Myr) compressional events3. ?? 1985 Nature Publishing Group.

  15. Performance Analysis of Occurrences January 1, 2011-December 31, 2011

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ludwig, M

    2012-03-16

    This report documents the analysis of the occurrences during the period January 1, 2011 through December 31, 2011. The report compares LLNL occurrences by reporting criteria and significance category to see if LLNL is reporting occurrences along similar percentages as other DOE sites. The three-year trends are analyzed. It does not include the analysis of the causes or the lessons learned from the occurrences, as they are analyzed separately. The number and types of occurrences that LLNL reports to DOE varies over time. This variation can be attributed to normally occurring changes in frequency; DOE's or LLNL's heightened interest inmore » a particular subject area; changes in LLNL processes; or emerging problems. Since all of the DOE sites use the same reporting criteria, it is helpful to understand if LLNL is consistent with or diverging from reporting at other sites. This section compares the normalized number of occurrences reported by LLNL and other DOE sites. In order to compare LLNL occurrence reports to occurrence reports from other DOE sites, we normalized (or standardized) the data from the sites. DOE sites vary widely in their budgets, populations, and scope of work and these variations may affect reporting frequency. In addition, reports are required for a wide range of occurrence types, some of which may not be applicable to all DOE sites. For example, one occurrence reporting group is Group 3, Nuclear Safety Basis, and not all sites have nuclear operations. Because limited information is available for all sites, the sites were normalized based on best available information. Site effort hours were extracted from the DOE Computerized Accident Incident Reporting System (CAIRS) and used to normalize (or standardize) the number of occurrences by site. Effort hours are those hours that employees normally work and do not include vacation, holiday hours etc. Sites are responsible for calculating their effort hours and ensuring entry into CAIRS. Out of the

  16. Landscape capability predicts upland game bird abundance and occurrence

    USGS Publications Warehouse

    Loman, Zachary G.; Blomberg, Erik J.; DeLuca, William; Harrison, Daniel J.; Loftin, Cyndy; Wood, Petra B.

    2017-01-01

    Landscape capability (LC) models are a spatial tool with potential applications in conservation planning. We used survey data to validate LC models as predictors of occurrence and abundance at broad and fine scales for American woodcock (Scolopax minor) and ruffed grouse (Bonasa umbellus). Landscape capability models were reliable predictors of occurrence but were less indicative of relative abundance at route (11.5–14.6 km) and point scales (0.5–1 km). As predictors of occurrence, LC models had high sensitivity (0.71–0.93) and were accurate (0.71–0.88) and precise (0.88 and 0.92 for woodcock and grouse, respectively). Models did not predict point-scale abundance independent of the ability to predict occurrence of either species. The LC models are useful predictors of patterns of occurrences in the northeastern United States, but they have limited utility as predictors of fine-scale or route-specific abundances. 

  17. New occurrences of fossilized feathers: systematics and taphonomy of the Santana Formation of the Araripe Basin (Cretaceous), NE, Brazil

    PubMed Central

    Anelli, Luiz Eduardo; Petri, Setembrino; Romero, Guilherme Raffaeli

    2016-01-01

    Here we describe three fossil feathers from the Early Cretaceous Santana Formation of the Araripe Basin, Brazil. Feathers are the most complex multiform vertebrate integuments; they perform different functions, occurring in both avian and non-avian dinosaurs. Despite their rarity, fossil feathers have been found across the world. Most of the Brazilian feather fossil record comes from the Santana Formation. This formation is composed of two members: Crato (lake) and Romualdo (lagoon); both of which are predominantly reduced deposits, precluding bottom dwelling organisms, resulting in exceptional preservation of the fossils. Despite arid and hot conditions during the Cretaceous, life teemed in the adjacency of this paleolake. Feathered non-avian dinosaurs have not yet been described from the Crato Member, even though there are suggestions of their presence in nearby basins. Our description of the three feathers from the Crato laminated limestone reveals that, despite the small sample size, they can be referred to coelurosaurian theropods. Moreover, based on comparisons with extant feather morphotypes they can be identified as one contour feather and two downy feathers. Despite their rareness and low taxonomic potential, fossilized feathers can offer insights about the paleobiology of its owners and the paleoecology of the Araripe Basin. PMID:27441102

  18. Does probability of occurrence relate to population dynamics?

    USGS Publications Warehouse

    Thuiller, Wilfried; Münkemüller, Tamara; Schiffers, Katja H.; Georges, Damien; Dullinger, Stefan; Eckhart, Vincent M.; Edwards, Thomas C.; Gravel, Dominique; Kunstler, Georges; Merow, Cory; Moore, Kara; Piedallu, Christian; Vissault, Steve; Zimmermann, Niklaus E.; Zurell, Damaris; Schurr, Frank M.

    2014-01-01

    Hutchinson defined species' realized niche as the set of environmental conditions in which populations can persist in the presence of competitors. In terms of demography, the realized niche corresponds to the environments where the intrinsic growth rate (r) of populations is positive. Observed species occurrences should reflect the realized niche when additional processes like dispersal and local extinction lags do not have overwhelming effects. Despite the foundational nature of these ideas, quantitative assessments of the relationship between range-wide demographic performance and occurrence probability have not been made. This assessment is needed both to improve our conceptual understanding of species' niches and ranges and to develop reliable mechanistic models of species geographic distributions that incorporate demography and species interactions.The objective of this study is to analyse how demographic parameters (intrinsic growth rate r and carrying capacity K ) and population density (N ) relate to occurrence probability (Pocc ). We hypothesized that these relationships vary with species' competitive ability. Demographic parameters, density, and occurrence probability were estimated for 108 tree species from four temperate forest inventory surveys (Québec, western USA, France and Switzerland). We used published information of shade tolerance as indicators of light competition strategy, assuming that high tolerance denotes high competitive capacity in stable forest environments.Interestingly, relationships between demographic parameters and occurrence probability did not vary substantially across degrees of shade tolerance and regions. Although they were influenced by the uncertainty in the estimation of the demographic parameters, we found that r was generally negatively correlated with Pocc, while N, and for most regions K, was generally positively correlated with Pocc. Thus, in temperate forest trees the regions of highest occurrence

  19. Developing Predictive Models for Algal Bloom Occurrence and Identifying Factors Controlling their Occurrence in the Charlotte County and Surroundings

    NASA Astrophysics Data System (ADS)

    Karki, S.; Sultan, M.; Elkadiri, R.; Chouinard, K.

    2017-12-01

    Numerous occurrences of harmful algal blooms (Karenia Brevis) were reported from Southwest Florida along the coast of Charlotte County, Florida. We are developing data-driven (remote sensing, field, and meteorological data) models to accomplish the following: (1) identify the factors controlling bloom development, (2) forecast bloom occurrences, and (3) make recommendations for monitoring variables that are found to be most indicative of algal bloom occurrences and for identifying optimum locations for monitoring stations. To accomplish these three tasks we completed/are working on the following steps. Firstly, we developed an automatic system for downloading and processing of ocean color data acquired through MODIS Terra and MODIS Aqua products using SeaDAS ocean color processing software. Examples of extracted variables include: chlorophyll a (OC3M), chlorophyll a Generalized Inherent Optical Property (GIOP), chlorophyll a Garver-Siegel- Maritorena (GSM), sea surface temperature (SST), Secchi disk depth, euphotic depth, turbidity index, wind direction and speed, colored dissolved organic material (CDOM). Secondly we are developing a GIS database and a web-based GIS to host the generated remote sensing-based products in addition to relevant meteorological and field data. Examples of the meteorological and field inputs include: precipitation amount and rates, concentrations of nitrogen, phosphorous, fecal coliform and Dissolved Oxygen (DO). Thirdly, we are constructing and validating a multivariate regression model and an artificial neural network model to simulate past algal bloom occurrences using the compiled archival remote sensing, meteorological, and field data. The validated model will then be used to predict the timing and location of algal bloom occurrences. The developed system, upon completion, could enhance the decision making process, improve the citizen's quality of life, and strengthen the local economy.

  20. Forest Fire Occurrence in Southern Counties, 1966-1975

    Treesearch

    M.L. Doolittle

    1977-01-01

    Forest fire occurrence data for individual protection units generally are unavailable outside particular state organization. Number of fires, area protected and fire occurrence rate (fires per 1,000,000 acres) from 1966 to 1975, are presented in tables for the 993 counties under protection in 13 southern states. These data are compared with data for the preceeding...

  1. Spatial niche partitioning in dinosaurs from the latest cretaceous (Maastrichtian) of North America.

    PubMed

    Lyson, Tyler R; Longrich, Nicholas R

    2011-04-22

    We examine patterns of occurrence of associated dinosaur specimens (n = 343) from the North American Upper Cretaceous Hell Creek Formation and equivalent beds, by comparing their relative abundance in sandstone and mudstone. Ceratopsians preferentially occur in mudstone, whereas hadrosaurs and the small ornithopod Thescelosaurus show a strong association with sandstone. By contrast, the giant carnivore Tyrannosaurus rex shows no preferred association with either lithology. These lithologies are used as an indicator of environment of deposition, with sandstone generally representing river environments, and finer grained sediments typically representing floodplain environments. Given these patterns of occurrence, we argue that spatial niche partitioning helped reduce competition for resources between the herbivorous dinosaurs. Within coastal lowlands ceratopsians preferred habitats farther away from rivers, whereas hadrosaurs and Thescelosaurus preferred habitats in close proximity to rivers, and T. rex, the ecosystem's sole large carnivore, inhabited both palaeoenvironments. Spatial partitioning of the environment helps explain how several species of large herbivorous dinosaurs coexisted. This study emphasizes that different lithologies can preserve dramatically dissimilar vertebrate assemblages, even when deposited in close proximity and within a narrow window of time. The lithology in which fossils are preserved should be recorded as these data can provide unique insights into the palaeoecology of the animals they preserve.

  2. Spatial niche partitioning in dinosaurs from the latest cretaceous (Maastrichtian) of North America

    PubMed Central

    Lyson, Tyler R.; Longrich, Nicholas R.

    2011-01-01

    We examine patterns of occurrence of associated dinosaur specimens (n = 343) from the North American Upper Cretaceous Hell Creek Formation and equivalent beds, by comparing their relative abundance in sandstone and mudstone. Ceratopsians preferentially occur in mudstone, whereas hadrosaurs and the small ornithopod Thescelosaurus show a strong association with sandstone. By contrast, the giant carnivore Tyrannosaurus rex shows no preferred association with either lithology. These lithologies are used as an indicator of environment of deposition, with sandstone generally representing river environments, and finer grained sediments typically representing floodplain environments. Given these patterns of occurrence, we argue that spatial niche partitioning helped reduce competition for resources between the herbivorous dinosaurs. Within coastal lowlands ceratopsians preferred habitats farther away from rivers, whereas hadrosaurs and Thescelosaurus preferred habitats in close proximity to rivers, and T. rex, the ecosystem's sole large carnivore, inhabited both palaeoenvironments. Spatial partitioning of the environment helps explain how several species of large herbivorous dinosaurs coexisted. This study emphasizes that different lithologies can preserve dramatically dissimilar vertebrate assemblages, even when deposited in close proximity and within a narrow window of time. The lithology in which fossils are preserved should be recorded as these data can provide unique insights into the palaeoecology of the animals they preserve. PMID:20943689

  3. Co-occurrence of chancroid and gonorrhea.

    PubMed

    Nawaf, Al-Mutairi; Joshi, Arun; Tayeh, Mohammad

    2006-01-01

    Gonorrhea and chancroid are common sexually transmitted infections in many parts of the world. Still, co-occurrence of these two conditions is uncommonly reported. We present here a patient who presented with painful genital ulcers and urethral discharge simultaneously acquired from a single exposure, which turned out to be chancroid and gonorrhea, respectively. Both conditions responded well to a single intramuscular dose of ceftriaxone 250 mg. This report describes the uncommon occurrence of gonorrhea and chancroid in a patient. Clinical features, relevant investigations, treatment options of these two sexually transmitted infections, and possible implications in view of the human immunodeficiency virus (HIV) pandemic are briefly discussed.

  4. 10 CFR 140.83 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 2 2014-01-01 2014-01-01 false Determination of extraordinary nuclear occurrence. 140.83 Section 140.83 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED) FINANCIAL PROTECTION REQUIREMENTS AND INDEMNITY AGREEMENTS Extraordinary Nuclear Occurrences § 140.83 Determination of extraordinary nuclear...

  5. 10 CFR 140.83 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 2 2011-01-01 2011-01-01 false Determination of extraordinary nuclear occurrence. 140.83 Section 140.83 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED) FINANCIAL PROTECTION REQUIREMENTS AND INDEMNITY AGREEMENTS Extraordinary Nuclear Occurrences § 140.83 Determination of extraordinary nuclear...

  6. 10 CFR 140.83 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 10 Energy 2 2013-01-01 2013-01-01 false Determination of extraordinary nuclear occurrence. 140.83 Section 140.83 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED) FINANCIAL PROTECTION REQUIREMENTS AND INDEMNITY AGREEMENTS Extraordinary Nuclear Occurrences § 140.83 Determination of extraordinary nuclear...

  7. 10 CFR 140.83 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 10 Energy 2 2012-01-01 2012-01-01 false Determination of extraordinary nuclear occurrence. 140.83 Section 140.83 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED) FINANCIAL PROTECTION REQUIREMENTS AND INDEMNITY AGREEMENTS Extraordinary Nuclear Occurrences § 140.83 Determination of extraordinary nuclear...

  8. 10 CFR 140.83 - Determination of extraordinary nuclear occurrence.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 2 2010-01-01 2010-01-01 false Determination of extraordinary nuclear occurrence. 140.83 Section 140.83 Energy NUCLEAR REGULATORY COMMISSION (CONTINUED) FINANCIAL PROTECTION REQUIREMENTS AND INDEMNITY AGREEMENTS Extraordinary Nuclear Occurrences § 140.83 Determination of extraordinary nuclear...

  9. Correlation and taphonomy of late Cretaceous vertebrate localities in Fruitland and Kirtland formations, San Juan basin, New Mexico

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hunt, A.P.

    Most fossil vertebrates in the Fruitland and Kirtland formations occur in two narrow stratigraphic intervals. The upper interval comprises the approximately 30 m-thick Naashoibito Member of the Kirtland formation. Fossiliferous localities within this interval are physically correlatable within the small and continuous outcrop belt of this unit. The lower fossiliferous interval comprises a 20 m-thick sequence between the stratigraphically highest, thick coal bed (1 m thick) in the Fruitland Formation and distinctive brown tabular sandstones in the lower Kirtland formation, which differ in color and geometry from adjacent sandstone bodies. Localities within this interval occur in physically discontinuous outcrops, principallymore » between Hunter Wash in the northwest and Coal Creek in the southeast. These localities can be correlated utilizing the upper Fruitland coal, the lower Kirtland sandstones, and a series of volcanic ashes. Measurement of 38 stratigraphic sections and examination of more than 100 subsurface geophysical logs has allowed detailed correlation between the principal areas of vertebrate-fossil occurrences in Hunter Wash and the Fossil Forest. The occurrence of fossils in the Naashoibito is related to energy of depositional environment. Farther north, coarser deposits of the McDermott Member of the Animas Formation, which represent proximal facies of the Naashoibito, lack abundant fossil vertebrates. The geographic extent of vertebrate fossils in the upper Fruitland and lower Kirtland coincides with the extent of the tabular brown sandstones in the lower Kirtland and is related to Laramide downwarping of the central San Juan basin.« less

  10. Species co-occurrence analysis predicts management outcomes for multiple threats.

    PubMed

    Tulloch, Ayesha I T; Chadès, Iadine; Lindenmayer, David B

    2018-03-01

    Mitigating the impacts of global anthropogenic change on species is conservation's greatest challenge. Forecasting the effects of actions to mitigate threats is hampered by incomplete information on species' responses. We develop an approach to predict community restructuring under threat management, which combines models of responses to threats with network analyses of species co-occurrence. We discover that contributions by species to network co-occurrence predict their recovery under reduction of multiple threats. Highly connected species are likely to benefit more from threat management than poorly connected species. Importantly, we show that information from a few species on co-occurrence and expected responses to alternative threat management actions can be used to train a response model for an entire community. We use a unique management dataset for a threatened bird community to validate our predictions and, in doing so, demonstrate positive feedbacks in occurrence and co-occurrence resulting from shared threat management responses during ecosystem recovery.

  11. Mid-Type M Dwarf Planet Occurrence Rates

    NASA Astrophysics Data System (ADS)

    Hardegree-Ullman, Kevin; Cushing, Michael; Muirhead, Philip Steven

    2018-01-01

    Planet occurrence rates increase toward later spectral types; therefore, M dwarf systems are our most promising targets in the search for exoplanets. Stars in the original Kepler field were primarily characterized from photometry alone, resulting in large uncertainties (~30%) for properties of late-type stars like M dwarfs. Planet occurrence rate calculations require precise measurements of stellar radii, which can be constrained to ~10% using temperatures and metallicities derived from spectra. These measurements need to be performed on a statistically significant population of stars, including systems with and without planets. Using WIYN, the Discovery Channel Telescope, and IRTF, we have gathered spectra of about half of the ~550 probable mid-type M dwarfs in the Kepler field. Our observations have led to better constraints on stellar parameters and new planet occurrence rates for mid-type M dwarfs. We gratefully acknowledge support from the NASA-NSF Exoplanet Observational Research partnership, the National Optical Astronomy Observatory, and the NASA Exoplanet Science Institute.

  12. DON occurrence in cereal grains: A North American perspective

    USDA-ARS?s Scientific Manuscript database

    The occurrence of deoxynivalenol (DON) in agricultural commodities has been reported all over the world, with levels varying amongst grain type and years of production. However, a systematic review of the current situation regarding this mycotoxin, its occurrence, and its management in North America...

  13. Occurrence rate of dipolarization fronts in the plasma sheet: Cluster observations

    NASA Astrophysics Data System (ADS)

    Xiao, Sudong; Zhang, Tielong; Wang, Guoqiang; Volwerk, Martin; Ge, Yasong; Schmid, Daniel; Nakamura, Rumi; Baumjohann, Wolfgang; Plaschke, Ferdinand

    2017-08-01

    We investigate the occurrence rate of dipolarization fronts (DFs) in the plasma sheet by taking full advantage of all four Cluster satellites (C1-4) from years 2001 to 2009. In total, we select 466 joint-observation DF events, in which 318, 282, 254, and 236 DFs are observed by C1, C2, C3, and C4, respectively. Our findings are as follows: (1) the maximum occurrence rate is ˜ 15.3 events per day at X ˜ 15 RE in the XY plane, and the average occurrence rate is ˜ 5.4 events per day over the whole observation period; (2) the occurrence rate on the dusk side of the plasma sheet is larger and decreases with increasing BXY/BLobe; (3) the occurrence rate within |Y| < 6 RE increases gradually from X ≈ -19 to -15 RE and then decreases from X ≈ -15 to -10 RE; (4) the occurrence rate when AE > 200 nT is much larger than that when AE < 200 nT, indicating that DFs preferentially occur during high geomagnetic activity. The magnetic pileup and earthward and duskward ion flows could contribute to the increases in the occurrence rate from X ≈ -19 to -15 RE. We suggest that both geomagnetic activity and multiple DFs contribute to the high occurrence rate of the DFs. In addition, the finite length of the DF in the dawn-dusk direction can affect the chance that a satellite observes the DF.

  14. Mode of occurrence of chromium in four US coals

    USGS Publications Warehouse

    Huggins, Frank E.; Shah, N.; Huffman, G.P.; Kolker, A.; Crowley, S.; Palmer, C.A.; Finkelman, R.B.

    2000-01-01

    The mode of occurrence of chromium in three US bituminous coals and one US subbituminous has been examined using both X-ray absorption fine structure (XAFS) spectroscopy and a selective leaching protocol supplemented by scanning electron microscopy (SEM) and electron microprobe measurements. A synthesis of results from both methods indicates that chromium occurs principally in two forms in the bituminous coals: the major occurrence of chromium is associated with the macerals and is not readily leached by any reagent, whereas a second, lesser occurrence, which is leachable in hydrofluoric acid (HF), is associated with the clay mineral, illite. The former occurrence is believed to be a small particle oxyhydroxide phase (CrO(OH)). One coal also contained a small fraction (<5%) of the chromium in the form of a chromian magnetite, and the leaching protocol indicated the possibility of a similar small fraction of chromium in sulfide form in all three coals. There was little agreement between the two techniques on the mode of occurrence of chromium in the subbituminous coal; however, only a limited number of subbituminous coals have been analyzed by either technique. The chromium in all four coals was trivalent as no evidence was found for the Cr6+ oxidation state in any coal.

  15. Global occurrence of infant botulism, 1976-2006.

    PubMed

    Koepke, Ruth; Sobel, Jeremy; Arnon, Stephen S

    2008-07-01

    To summarize the worldwide occurrence of reported infant (intestinal toxemia) botulism cases since first recognition of the disease in 1976. We collected information on infant botulism cases by active and passive surveillance, by provision of therapeutic Human Botulism Immune Globulin to suspected cases, and by searching the medical literature. We defined a case as laboratory-confirmed botulism that occurred in an infant occurrence of at least 1 case of infant botulism among their residents. The United States, Argentina, Australia, Canada, Italy, and Japan, in this order, reported the largest number of cases. A history of honey exposure was significantly more common among case subjects hospitalized outside of the United States than among those who were recently hospitalized in California. Most countries have not yet reported cases of infant botulism. This limited reporting of the disease to date contrasts with the known global occurrence of Clostridium botulinum spores in soils and dust and suggests that infant botulism may be under-recognized, underreported, or both. When bulbar palsies, hypotonia, and weakness are present, physicians should consider the possibility of infant botulism even if the patient has not been fed honey. Publication of additional case reports and surveillance summaries will enhance understanding of the occurrence and extent of this under-recognized disease.

  16. Active Longitude and Coronal Mass Ejection Occurrences

    NASA Astrophysics Data System (ADS)

    Gyenge, N.; Singh, T.; Kiss, T. S.; Srivastava, A. K.; Erdélyi, R.

    2017-03-01

    The spatial inhomogeneity of the distribution of coronal mass ejection (CME) occurrences in the solar atmosphere could provide a tool to estimate the longitudinal position of the most probable CME-capable active regions in the Sun. The anomaly in the longitudinal distribution of active regions themselves is often referred to as active longitude (AL). In order to reveal the connection between the AL and CME spatial occurrences, here we investigate the morphological properties of active regions. The first morphological property studied is the separateness parameter, which is able to characterize the probability of the occurrence of an energetic event, such as a solar flare or CME. The second morphological property is the sunspot tilt angle. The tilt angle of sunspot groups allows us to estimate the helicity of active regions. The increased helicity leads to a more complex buildup of the magnetic structure and also can cause CME eruption. We found that the most complex active regions appear near the AL and that the AL itself is associated with the most tilted active regions. Therefore, the number of CME occurrences is higher within the AL. The origin of the fast CMEs is also found to be associated with this region. We concluded that the source of the most probably CME-capable active regions is at the AL. By applying this method, we can potentially forecast a flare and/or CME source several Carrington rotations in advance. This finding also provides new information for solar dynamo modeling.

  17. A laboratory exercise in experimental bioimmuration

    USGS Publications Warehouse

    Mankiewicz, C.

    1998-01-01

    A paleobiologic laboratory exercise using lunch meat, cheeses, and condiments provides a means for studying a method of fossil preservation called "bioimmuration." The exercise also has students deal with problems associated with other aspects of taphonomy, taxonomy, and paleoecology.

  18. Human and biophysical influences on fire occurrence in the United States

    USGS Publications Warehouse

    Hawbaker, Todd J.; Radeloff, Volker C.; Stewart, Susan I.; Hammer, Roger B.; Keuler, Nicholas S.; Clayton, Murray K.

    2013-01-01

    National-scale analyses of fire occurrence are needed to prioritize fire policy and management activities across the United States. However, the drivers of national-scale patterns of fire occurrence are not well understood, and how the relative importance of human or biophysical factors varies across the country is unclear. Our research goal was to model the drivers of fire occurrence within ecoregions across the conterminous United States. We used generalized linear models to compare the relative influence of human, vegetation, climate, and topographic variables on fire occurrence in the United States, as measured by MODIS active fire detections collected between 2000 and 2006. We constructed models for all fires and for large fires only and generated predictive maps to quantify fire occurrence probabilities. Areas with high fire occurrence probabilities were widespread in the Southeast, and localized in the Mountain West, particularly in southern California, Arizona, and New Mexico. Probabilities for large-fire occurrence were generally lower, but hot spots existed in the western and south-central United States The probability of fire occurrence is a critical component of fire risk assessments, in addition to vegetation type, fire behavior, and the values at risk. Many of the hot spots we identified have extensive development in the wildland–urban interface and are near large metropolitan areas. Our results demonstrated that human variables were important predictors of both all fires and large fires and frequently exhibited nonlinear relationships. However, vegetation, climate, and topography were also significant variables in most ecoregions. If recent housing growth trends and fire occurrence patterns continue, these areas will continue to challenge policies and management efforts seeking to balance the risks generated by wildfires with the ecological benefits of fire.

  19. Packaging- and transportation-related occurrence reports : FY 1994 annual report

    DOT National Transportation Integrated Search

    1995-03-01

    The Oak Ridge National Laboratory, through its support to the Department of Energys Office of Facility Safety Analysis, EH-32, retrieves reports and information pertaining to transportation and : packaging occurrences from the centralized Occurrence ...

  20. Hierarchical models of animal abundance and occurrence

    USGS Publications Warehouse

    Royle, J. Andrew; Dorazio, R.M.

    2006-01-01

    Much of animal ecology is devoted to studies of abundance and occurrence of species, based on surveys of spatially referenced sample units. These surveys frequently yield sparse counts that are contaminated by imperfect detection, making direct inference about abundance or occurrence based on observational data infeasible. This article describes a flexible hierarchical modeling framework for estimation and inference about animal abundance and occurrence from survey data that are subject to imperfect detection. Within this framework, we specify models of abundance and detectability of animals at the level of the local populations defined by the sample units. Information at the level of the local population is aggregated by specifying models that describe variation in abundance and detection among sites. We describe likelihood-based and Bayesian methods for estimation and inference under the resulting hierarchical model. We provide two examples of the application of hierarchical models to animal survey data, the first based on removal counts of stream fish and the second based on avian quadrat counts. For both examples, we provide a Bayesian analysis of the models using the software WinBUGS.

  1. Active Longitude and Coronal Mass Ejection Occurrences

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gyenge, N.; Kiss, T. S.; Erdélyi, R.

    The spatial inhomogeneity of the distribution of coronal mass ejection (CME) occurrences in the solar atmosphere could provide a tool to estimate the longitudinal position of the most probable CME-capable active regions in the Sun. The anomaly in the longitudinal distribution of active regions themselves is often referred to as active longitude (AL). In order to reveal the connection between the AL and CME spatial occurrences, here we investigate the morphological properties of active regions. The first morphological property studied is the separateness parameter, which is able to characterize the probability of the occurrence of an energetic event, such asmore » a solar flare or CME. The second morphological property is the sunspot tilt angle. The tilt angle of sunspot groups allows us to estimate the helicity of active regions. The increased helicity leads to a more complex buildup of the magnetic structure and also can cause CME eruption. We found that the most complex active regions appear near the AL and that the AL itself is associated with the most tilted active regions. Therefore, the number of CME occurrences is higher within the AL. The origin of the fast CMEs is also found to be associated with this region. We concluded that the source of the most probably CME-capable active regions is at the AL. By applying this method, we can potentially forecast a flare and/or CME source several Carrington rotations in advance. This finding also provides new information for solar dynamo modeling.« less

  2. First natural occurrence of coesite

    USGS Publications Warehouse

    Chao, E.C.T.; Shoemaker, E.M.; Madsen, B.M.

    1960-01-01

    Coesite, the high-pressure polymorph of SiO2, hitherto known only as a synthetic compound, is identified as an abundant mineral in sheared Coconino sandstone at Meteor Crater, Arizona. This natural occurrence has important bearing on the recognition of meteorite impact craters in quartz-bearing geologic formations.

  3. Active Longitude and Solar Flare Occurrences

    NASA Astrophysics Data System (ADS)

    Gyenge, N.; Ludmány, A.; Baranyi, T.

    2016-02-01

    The aim of the present work is to specify the spatio-temporal characteristics of flare activity observed by the Reuven Ramaty High Energy Solar Spectroscopic Imager (RHESSI) and the Geostationary Operational Environmental Satellite (GOES) in connection with the behavior of the longitudinal domain of enhanced sunspot activity known as active longitude (AL). By using our method developed for this purpose, we identified the AL in every Carrington Rotation provided by the Debrecen Photoheliographic Data. The spatial probability of flare occurrence has been estimated depending on the longitudinal distance from AL in the northern and southern hemispheres separately. We have found that more than 60% of the RHESSI and GOES flares is located within +/- 36^\\circ from the AL. Hence, the most flare-productive active regions tend to be located in or close to the active longitudinal belt. This observed feature may allow for the prediction of the geo-effective position of the domain of enhanced flaring probability. Furthermore, we studied the temporal properties of flare occurrence near the AL and several significant fluctuations were found. More precisely, the results of the method are the following fluctuations: 0.8, 1.3, and 1.8 years. These temporal and spatial properties of the solar flare occurrence within the active longitudinal belts could provide us with an enhanced solar flare forecasting opportunity.

  4. Occurrence of clostridia in commercially available curry roux.

    PubMed

    Fujisawa, T; Aikawa, K; Takahashi, T; Yamai, S; Ueda, S

    2001-12-01

    The occurrence of clostridia was investigated in a total of 60 commercially available curry roux samples. Clostridia were isolated from 37 (62%) samples, and Clostridium perfringens was isolated from 7 (12%) samples. The isolates of C. perfringens did not produce enterotoxin. The frequency of occurrence was higher by the enrichment broth culture detection method than by the agar plate or pouch method. These findings suggest that enrichment broth culture is necessary for the detection of clostridia.

  5. Idaho National Laboratory Quarterly Occurrence Analysis

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Lisbeth Ann

    This report is published quarterly by the Idaho National Laboratory (INL) Quality and Performance Management Organization. The Department of Energy (DOE) Occurrence Reporting and Processing System (ORPS), as prescribed in DOE Order 232.2, “Occurrence Reporting and Processing of Operations Information,” requires a quarterly analysis of events, both reportable and not reportable, for the previous 12 months. This report is the analysis of 85 reportable events (18 from the 4th Qtr FY-15 and 67 from the prior three reporting quarters), as well as 25 other issue reports (including events found to be not reportable and Significant Category A and B conditions)more » identified at INL during the past 12 months (8 from this quarter and 17 from the prior three quarters).« less

  6. Six-Year Review Contaminant Occurrence Data

    EPA Pesticide Factsheets

    The Safe Drinking Water Act (SDWA) requires EPA to review each National Primary Drinking Water Regulation (NPDWR) at least once every six years and revise them, if appropriate. The purpose of the review, called the Six-Year Review, is to identify those NPDWRs for which current health effects assessments, changes in technology, and/or other factors provide a health or technical basis to support a regulatory revision that will maintain or strengthen public health protection. To support the national contaminant occurrence and exposure assessments performed under the Six-Year Review process, EPA analyzes SDWA compliance monitoring data from public water supplies for regulated drinking water contaminants. This analysis allows EPA to characterize the national occurrence of contaminants to help the Agency determine if there may be a meaningful opportunity to improve public health protection.

  7. Future Climate Data from RCP 4.5 and Occurrence of Malaria in Korea

    PubMed Central

    Kwak, Jaewon; Noh, Huiseong; Kim, Soojun; Singh, Vijay P.; Hong, Seung Jin; Kim, Duckgil; Lee, Keonhaeng; Kang, Narae; Kim, Hung Soo

    2014-01-01

    Since its reappearance at the Military Demarcation Line in 1993, malaria has been occurring annually in Korea. Malaria is regarded as a third grade nationally notifiable disease susceptible to climate change. The objective of this study is to quantify the effect of climatic factors on the occurrence of malaria in Korea and construct a malaria occurrence model for predicting the future trend of malaria under the influence of climate change. Using data from 2001–2011, the effect of time lag between malaria occurrence and mean temperature, relative humidity and total precipitation was investigated using spectral analysis. Also, a principal component regression model was constructed, considering multicollinearity. Future climate data, generated from RCP 4.5 climate change scenario and CNCM3 climate model, was applied to the constructed regression model to simulate future malaria occurrence and analyze the trend of occurrence. Results show an increase in the occurrence of malaria and the shortening of annual time of occurrence in the future. PMID:25321875

  8. Future climate data from RCP 4.5 and occurrence of malaria in Korea.

    PubMed

    Kwak, Jaewon; Noh, Huiseong; Kim, Soojun; Singh, Vijay P; Hong, Seung Jin; Kim, Duckgil; Lee, Keonhaeng; Kang, Narae; Kim, Hung Soo

    2014-10-15

    Since its reappearance at the Military Demarcation Line in 1993, malaria has been occurring annually in Korea. Malaria is regarded as a third grade nationally notifiable disease susceptible to climate change. The objective of this study is to quantify the effect of climatic factors on the occurrence of malaria in Korea and construct a malaria occurrence model for predicting the future trend of malaria under the influence of climate change. Using data from 2001-2011, the effect of time lag between malaria occurrence and mean temperature, relative humidity and total precipitation was investigated using spectral analysis. Also, a principal component regression model was constructed, considering multicollinearity. Future climate data, generated from RCP 4.5 climate change scenario and CNCM3 climate model, was applied to the constructed regression model to simulate future malaria occurrence and analyze the trend of occurrence. Results show an increase in the occurrence of malaria and the shortening of annual time of occurrence in the future.

  9. The global compendium of Aedes aegypti and Ae. albopictus occurrence

    PubMed Central

    Kraemer, Moritz U. G.; Sinka, Marianne E.; Duda, Kirsten A.; Mylne, Adrian; Shearer, Freya M.; Brady, Oliver J.; Messina, Jane P.; Barker, Christopher M.; Moore, Chester G.; Carvalho, Roberta G.; Coelho, Giovanini E.; Van Bortel, Wim; Hendrickx, Guy; Schaffner, Francis; Wint, G. R. William; Elyazar, Iqbal R. F.; Teng, Hwa-Jen; Hay, Simon I.

    2015-01-01

    Aedes aegypti and Ae. albopictus are the main vectors transmitting dengue and chikungunya viruses. Despite being pathogens of global public health importance, knowledge of their vectors’ global distribution remains patchy and sparse. A global geographic database of known occurrences of Ae. aegypti and Ae. albopictus between 1960 and 2014 was compiled. Herein we present the database, which comprises occurrence data linked to point or polygon locations, derived from peer-reviewed literature and unpublished studies including national entomological surveys and expert networks. We describe all data collection processes, as well as geo-positioning methods, database management and quality-control procedures. This is the first comprehensive global database of Ae. aegypti and Ae. albopictus occurrence, consisting of 19,930 and 22,137 geo-positioned occurrence records respectively. Both datasets can be used for a variety of mapping and spatial analyses of the vectors and, by inference, the diseases they transmit. PMID:26175912

  10. The global compendium of Aedes aegypti and Ae. albopictus occurrence

    NASA Astrophysics Data System (ADS)

    Kraemer, Moritz U. G.; Sinka, Marianne E.; Duda, Kirsten A.; Mylne, Adrian; Shearer, Freya M.; Brady, Oliver J.; Messina, Jane P.; Barker, Christopher M.; Moore, Chester G.; Carvalho, Roberta G.; Coelho, Giovanini E.; van Bortel, Wim; Hendrickx, Guy; Schaffner, Francis; Wint, G. R. William; Elyazar, Iqbal R. F.; Teng, Hwa-Jen; Hay, Simon I.

    2015-07-01

    Aedes aegypti and Ae. albopictus are the main vectors transmitting dengue and chikungunya viruses. Despite being pathogens of global public health importance, knowledge of their vectors’ global distribution remains patchy and sparse. A global geographic database of known occurrences of Ae. aegypti and Ae. albopictus between 1960 and 2014 was compiled. Herein we present the database, which comprises occurrence data linked to point or polygon locations, derived from peer-reviewed literature and unpublished studies including national entomological surveys and expert networks. We describe all data collection processes, as well as geo-positioning methods, database management and quality-control procedures. This is the first comprehensive global database of Ae. aegypti and Ae. albopictus occurrence, consisting of 19,930 and 22,137 geo-positioned occurrence records respectively. Both datasets can be used for a variety of mapping and spatial analyses of the vectors and, by inference, the diseases they transmit.

  11. Occurrence of microbial indicators in various ground water sources

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shadix, L.C.; Newport, B.S.; Crout, S.R.

    1996-11-01

    The United States Environmental Protection Agency (USEPA) and the American Water Works Association Research Foundation (AWWARF) have been collaborating in an ongoing study to research the application of molecular biology techniques versus conventional techniques for monitoring and consequently to obtain ground water microbial occurrence data. The bacterial assays described below were performed during the course of the USEPA/AWWARF study in addition to enteric virus, bacteriophage and Legionella assays to provide occurrence information and also to investigate the potential use of fecal indicator organisms as surrogates for enteric viruses. This paper presents occurrence data obtained for total coliform, Escherichia coli (E.more » coli), fecal enterococci and Clostridium perfringens (C. perfringens) bacteria from samples collected at thirty public ground water supplies.« less

  12. Normalized burn ratios link fire severity with patterns of avian occurrence

    USGS Publications Warehouse

    Rose, Eli T.; Simons, Theodore R.; Klein, Rob; McKerrow, Alexa

    2016-01-01

    ContextRemotely sensed differenced normalized burn ratios (DNBR) provide an index of fire severity across the footprint of a fire. We asked whether this index was useful for explaining patterns of bird occurrence within fire adapted xeric pine-oak forests of the southern Appalachian Mountains.ObjectivesWe evaluated the use of DNBR indices for linking ecosystem process with patterns of bird occurrence. We compared field-based and remotely sensed fire severity indices and used each to develop occupancy models for six bird species to identify patterns of bird occurrence following fire.MethodsWe identified and sampled 228 points within fires that recently burned within Great Smoky Mountains National Park. We performed avian point counts and field-assessed fire severity at each bird census point. We also used Landsat™ imagery acquired before and after each fire to quantify fire severity using DNBR. We used non-parametric methods to quantify agreement between fire severity indices, and evaluated single season occupancy models incorporating fire severity summarized at different spatial scales.ResultsAgreement between field-derived and remotely sensed measures of fire severity was influenced by vegetation type. Although occurrence models using field-derived indices of fire severity outperformed those using DNBR, summarizing DNBR at multiple spatial scales provided additional insights into patterns of occurrence associated with different sized patches of high severity fire.ConclusionsDNBR is useful for linking the effects of fire severity to patterns of bird occurrence, and informing how high severity fire shapes patterns of bird species occurrence on the landscape.

  13. The bivalve Placuna (Indoplacuna) miocenica from the Middle Miocene of Siwa Oasis, Western Desert of Egypt: Systematic paleontology, paleoecology, and taphonomic implications

    NASA Astrophysics Data System (ADS)

    El-Sabbagh, Ahmed M.; El Hedeny, Magdy M.; Rashwan, Mohammed A.; Abdel Aal, Abdel Aal A.

    2016-04-01

    The present study investigated the epifaunal, free lying bivalve Placuna (Indoplacuna) miocenica (Fuchs, 1883) encountered in the Middle Miocene Marmarica Formation of Siwa Oasis, Western Desert, Egypt, in terms of systematic paleontology, paleoecology and taphonomy. Well to moderately preserved shells of this species were collected from three sections. They have been found embedded in sandy, marly and chalky limestones. Although they are extremely thin and fragile, they occurred as complete disarticulated and articulated valves. Specimens of P. (I.) miocenica are highly accumulated in the north Siwa section forming a coquinoid band (30 cm thick). In addition, they are generally distributed sporadically in different stratigraphic levels within the three studied sequences. Taphonomic observations indicated that these shells were affected by encrustation, bioerosion, disarticulation, fragmentation and abrasion. Moreover, valves of this species suffered minor chipping along their fragile margins. The occurrence of the studied species associated with oysters and other benthic faunal assemblages within carbonate sediments revealed shallow, low energy, warm and intertidal environments with periods of relatively agitated conditions.

  14. 10 CFR 707.9 - Drug testing as a result of an occurrence.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 10 Energy 4 2013-01-01 2013-01-01 false Drug testing as a result of an occurrence. 707.9 Section... Drug testing as a result of an occurrence. When there is an occurrence which is required to be reported... regulations, it may be necessary to test individuals in testing designated positions, or individuals with...

  15. 10 CFR 707.9 - Drug testing as a result of an occurrence.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 10 Energy 4 2011-01-01 2011-01-01 false Drug testing as a result of an occurrence. 707.9 Section... Drug testing as a result of an occurrence. When there is an occurrence which is required to be reported... regulations, it may be necessary to test individuals in testing designated positions, or individuals with...

  16. 10 CFR 707.9 - Drug testing as a result of an occurrence.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 10 Energy 4 2014-01-01 2014-01-01 false Drug testing as a result of an occurrence. 707.9 Section... Drug testing as a result of an occurrence. When there is an occurrence which is required to be reported... regulations, it may be necessary to test individuals in testing designated positions, or individuals with...

  17. 10 CFR 707.9 - Drug testing as a result of an occurrence.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 10 Energy 4 2010-01-01 2010-01-01 false Drug testing as a result of an occurrence. 707.9 Section... Drug testing as a result of an occurrence. When there is an occurrence which is required to be reported... regulations, it may be necessary to test individuals in testing designated positions, or individuals with...

  18. 10 CFR 707.9 - Drug testing as a result of an occurrence.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 10 Energy 4 2012-01-01 2012-01-01 false Drug testing as a result of an occurrence. 707.9 Section... Drug testing as a result of an occurrence. When there is an occurrence which is required to be reported... regulations, it may be necessary to test individuals in testing designated positions, or individuals with...

  19. Deciphering microbial interactions and detecting keystone species with co-occurrence networks

    PubMed Central

    Berry, David; Widder, Stefanie

    2014-01-01

    Co-occurrence networks produced from microbial survey sequencing data are frequently used to identify interactions between community members. While this approach has potential to reveal ecological processes, it has been insufficiently validated due to the technical limitations inherent in studying complex microbial ecosystems. Here, we simulate multi-species microbial communities with known interaction patterns using generalized Lotka-Volterra dynamics. We then construct co-occurrence networks and evaluate how well networks reveal the underlying interactions and how experimental and ecological parameters can affect network inference and interpretation. We find that co-occurrence networks can recapitulate interaction networks under certain conditions, but that they lose interpretability when the effects of habitat filtering become significant. We demonstrate that networks suffer from local hot spots of spurious correlation in the neighborhood of hub species that engage in many interactions. We also identify topological features associated with keystone species in co-occurrence networks. This study provides a substantiated framework to guide environmental microbiologists in the construction and interpretation of co-occurrence networks from microbial survey datasets. PMID:24904535

  20. Deciphering microbial interactions and detecting keystone species with co-occurrence networks.

    PubMed

    Berry, David; Widder, Stefanie

    2014-01-01

    Co-occurrence networks produced from microbial survey sequencing data are frequently used to identify interactions between community members. While this approach has potential to reveal ecological processes, it has been insufficiently validated due to the technical limitations inherent in studying complex microbial ecosystems. Here, we simulate multi-species microbial communities with known interaction patterns using generalized Lotka-Volterra dynamics. We then construct co-occurrence networks and evaluate how well networks reveal the underlying interactions and how experimental and ecological parameters can affect network inference and interpretation. We find that co-occurrence networks can recapitulate interaction networks under certain conditions, but that they lose interpretability when the effects of habitat filtering become significant. We demonstrate that networks suffer from local hot spots of spurious correlation in the neighborhood of hub species that engage in many interactions. We also identify topological features associated with keystone species in co-occurrence networks. This study provides a substantiated framework to guide environmental microbiologists in the construction and interpretation of co-occurrence networks from microbial survey datasets.

  1. Late Neogene foraminifera from the northern Namibian continental shelf and the transition to the Benguela Upwelling System

    NASA Astrophysics Data System (ADS)

    Bergh, Eugene W.; Compton, John S.; Frenzel, Peter

    2018-05-01

    Middle Miocene to Plio-Pleistocene foraminifera provide insights into the palaeoenvironment on the northern Namibian continental shelf located at the far northern end of the present-day Benguela Upwelling System (BUS). Biostratigraphy and Strontium Isotope Stratigraphy (SIS) of the recovered basal olive-green mud unit indicate an age of 16 to 14 Ma. A sharp, erosional contact separates the basal mud from the overlying Plio-Pleistocene gravelly pelletal phosphorite sands. Grain size data, P/B ratios and benthic diversity indices indicate a change between the middle Miocene and overlying Plio-Pleistocene palaeoenvironments linked to the timing and conditions associated with the initiation of the BUS. The different lithological units and microfossil assemblages in the olive-green mud unit and the overlying pelletal phosphorite units support the late Miocene initiation of the BUS and the northwards migration of the Angola-Benguela Front. Planktic foraminifera indicate a shift from warmer surface water conditions to cooler conditions during the initiation of the BUS. Benthic palaeobathymetric ranges and P/B ratios are consistent with outer shelf water depths suggesting a deeper palaeoenvironment during the Mid-Miocene Climatic Optimum (MMCO) than today. Benthic foraminifera in the middle Miocene are dominated by large (>1 mm) taxa and adapted to oligotrophic environments before the initiation of the BUS. The benthic assemblage composition indicates that bottom water conditions changed to eutrophic conditions during the Plio-Pleistocene under intensified upwelling conditions.

  2. Improving SysSim's Planetary Occurrence Rate Estimates

    NASA Astrophysics Data System (ADS)

    Ashby, Keir; Ragozzine, Darin; Hsu, Danley; Ford, Eric B.

    2017-10-01

    Kepler's catalog of thousands of transiting planet candidates enables statistical characterization of the underlying planet occurrence rates as a function of period and radius. Due to geometric factors and general noise in measurements, we know that many planets--especially those with a small-radius and/or long-period--were not observed by Kepler.To account for Kepler's detection criteria, Hsu et al. 2017 expanded on work in Lissuaer et al. 2011 to develop the Planetary System Simulator or "SysSim". SysSim uses a forward model to generate simulated catalogs of exoplanet systems, determine which of those simulated planets would have been seen by Kepler in the presence of uncertainties, and then compares those “observed planets” to those actually seen by Kepler. It then uses Approximate Bayesian Computation to infer the posterior probability distributions of the input parameters used to generate the forward model. In Hsu et al. 2017, we focused on matching the observed frequency of planets by solving for the underlying occurrence rate for each bin in a 2-dimensional grid of radius and period. After summarizing the results of Hsu et al. 2017, we show new results that investigate the effect on occurrence rates from including more accurate completeness products (from the Kepler DR25 analysis) into SysSim.

  3. Statistical modeling of storm-level Kp occurrences

    USGS Publications Warehouse

    Remick, K.J.; Love, J.J.

    2006-01-01

    We consider the statistical modeling of the occurrence in time of large Kp magnetic storms as a Poisson process, testing whether or not relatively rare, large Kp events can be considered to arise from a stochastic, sequential, and memoryless process. For a Poisson process, the wait times between successive events occur statistically with an exponential density function. Fitting an exponential function to the durations between successive large Kp events forms the basis of our analysis. Defining these wait times by calculating the differences between times when Kp exceeds a certain value, such as Kp ??? 5, we find the wait-time distribution is not exponential. Because large storms often have several periods with large Kp values, their occurrence in time is not memoryless; short duration wait times are not independent of each other and are often clumped together in time. If we remove same-storm large Kp occurrences, the resulting wait times are very nearly exponentially distributed and the storm arrival process can be characterized as Poisson. Fittings are performed on wait time data for Kp ??? 5, 6, 7, and 8. The mean wait times between storms exceeding such Kp thresholds are 7.12, 16.55, 42.22, and 121.40 days respectively.

  4. Worldwide Occurrence of Mycotoxins in Cereals and Cereal-Derived Food Products: Public Health Perspectives of Their Co-occurrence.

    PubMed

    Lee, Hyun Jung; Ryu, Dojin

    2017-08-23

    Cereal grains and their processed food products are frequently contaminated with mycotoxins. Among many, five major mycotoxins of aflatoxins, ochratoxins, fumonisins, deoxynivalenol, and zearalenone are of significant public health concern as they can cause adverse effects in humans. Being airborne or soilborne, the cosmopolitan nature of mycotoxigenic fungi contribute to the worldwide occurrence of mycotoxins. On the basis of the global occurrence data reported during the past 10 years, the incidences and maximum levels in raw cereal grains were 55% and 1642 μg/kg for aflatoxins, 29% and 1164 μg/kg for ochratoxin A, 61% and 71,121 μg/kg for fumonisins, 58% and 41,157 μg/kg, for deoxynivalenol, and 46% and 3049 μg/kg for zearalenone. The concentrations of mycotoxins tend to be lower in processed food products; the incidences varied depending on the individual mycotoxins, possibly due to the varying stability during processing and distribution of mycotoxins. It should be noted that more than one mycotoxin, produced by a single or several fungal species, may occur in various combinations in a given sample or food. Most studies reported additive or synergistic effects, suggesting that these mixtures may pose a significant threat to public health, particularly to infants and young children. Therefore, information on the co-occurrence of mycotoxins and their interactive toxicity is summarized in this paper.

  5. Assessment of multi-wildfire occurrence data for machine learning based risk modelling

    NASA Astrophysics Data System (ADS)

    Lim, C. H.; Kim, M.; Kim, S. J.; Yoo, S.; Lee, W. K.

    2017-12-01

    The occurrence of East Asian wildfires is mainly caused by human-activities, but the extreme drought increased due to the climate change caused wildfires and they spread to large-scale fires. Accurate occurrence location data is required for modelling wildfire probability and risk. In South Korea, occurrence data surveyed through KFS (Korea Forest Service) and MODIS (MODerate-resolution Imaging Spectroradiometer) satellite-based active fire data can be utilized. In this study, two sorts of wildfire occurrence data were applied to select suitable occurrence data for machine learning based wildfire risk modelling. MaxEnt (Maximum Entropy) model based on machine learning is used for wildfire risk modelling, and two types of occurrence data and socio-economic and climate-environment data are applied to modelling. In the results with KFS survey based data, the low relationship was shown with climate-environmental factors, and the uncertainty of coordinate information appeared. The MODIS-based active fire data were found outside the forests, and there were a lot of spots that did not match the actual wildfires. In order to utilize MODIS-based active fire data, it was necessary to extract forest area and utilize only high-confidence level data. In KFS data, it was necessary to separate the analysis according to the damage scale to improve the modelling accuracy. Ultimately, it is considered to be the best way to simulate the wildfire risk by constructing more accurate information by combining two sorts of wildfire occurrence data.

  6. Dressing effects on the occurrence scattering time retardation and advance in a dusty plasma

    NASA Astrophysics Data System (ADS)

    Lee, Myoung-Jae; Jung, Young-Dae; Hanyang Plasma Team

    2017-10-01

    The dressing effects on the occurrence scattering time for the dust-dust interaction are investigated in a complex plasma. The first-order eikonal analysis is applied to obtain the scattering amplitude and the occurrence scattering time for the dust-dust interaction. The result shows that dressing effect enhances the retardation phenomena of the occurrence scattering time in the forward scattering domain. It is shown that the oscillatory behavior of the scaled occurrence scattering time is getting more significant with an increase of the Debye length. It is also found that the retardation domain of the occurrence scattering time increases with a decrease of the Debye length. The variation of the occurrence scattering time retardation and advance due to the dressing effect is also discussed.

  7. Analysis, toxicity, occurrence and biodegradation of nonylphenol isomers: a review.

    PubMed

    Lu, Zhijiang; Gan, Jay

    2014-12-01

    Over the last two decades, nonylphenols (NPs) have become to be known as a priority hazardous substance due primarily to its estrogenicity and ubiquitous occurrence in the environment. Nonylphenols are commonly treated as a single compound in the evaluation of their environmental occurrence, fate and transport, treatment or toxicity. However, technical nonylphenols (tNPs) are in fact a mixture of more than 100 isomers and congeners. Recent studies showed that some of these isomers behaved significantly differently in occurrence, estrogenicity and biodegradability. The most estrogenic isomer was about 2 to 4 times more active than tNP. Moreover, the half lives of the most recalcitrant isomers were about 3 to 4 times as long as those of readily-biodegradable isomers. Negligence of NP's isomer specificity may result in inaccurate assessment of its ecological and health effects. In this review, we summarized the recent publications on the analysis, occurrence, toxicity and biodegradation of NP at the isomer level and highlighted future research needs to improve our understanding of isomer-specificity of NP. Copyright © 2014. Published by Elsevier Ltd.

  8. The fate of human remains in a maritime context and feasibility for forensic humanitarian action to assist in their recovery and identification.

    PubMed

    Ellingham, Sarah Theresa Dorothea; Perich, Pierre; Tidball-Binz, Morris

    2017-10-01

    The number of annual maritime fatalities reported in the Mediterranean has more than doubled in the last two years, a phenomenon closely linked to the increase of migrants attempting to reach Europe via the Mediterranean. The majority of victims reportedly never gets recovered, which in part relates to the fact that the mechanisms and interaction of factors affecting marine taphonomy are still largely not understood. These factors include intrinsic factors such as whether the individual was alive or dead at the time of submergence, the individual's stature and clothing, as well as extrinsic factors such including ambient temperature, currents, water depth, salinity and oxygen levels. This paper provides a compilation of the current literature on factors influencing marine taphonomy, recovery and identification procedures for submerged remains, and discusses the implications for the retrieval and identification of maritime mass fatalities as part of the humanitarian response, specifically humanitarian forensic action, to the consequences of the current migration phenomenon. Copyright © 2017. Published by Elsevier B.V.

  9. Occurrence analysis of daily rainfalls through non-homogeneous Poissonian processes

    NASA Astrophysics Data System (ADS)

    Sirangelo, B.; Ferrari, E.; de Luca, D. L.

    2011-06-01

    A stochastic model based on a non-homogeneous Poisson process, characterised by a time-dependent intensity of rainfall occurrence, is employed to explain seasonal effects of daily rainfalls exceeding prefixed threshold values. The data modelling has been performed with a partition of observed daily rainfall data into a calibration period for parameter estimation and a validation period for checking on occurrence process changes. The model has been applied to a set of rain gauges located in different geographical areas of Southern Italy. The results show a good fit for time-varying intensity of rainfall occurrence process by 2-harmonic Fourier law and no statistically significant evidence of changes in the validation period for different threshold values.

  10. Occurrence of Phlebitis: A Systematic Review and Meta-analysis.

    PubMed

    Chang, Wen P; Peng, Yu X

    Peripheral venous catheters (PVCs) are commonly used in clinical practice. However, varying degrees of phlebitis often occur in patients receiving intravenous injections. The relevant literature suggests that phlebitis occurrence is highly associated with the catheter gauge, insertion site, and catheterization duration. Nevertheless, no meta-analysis has been performed on the influence of these three factors on the occurrence of phlebitis. The objective of this study was to determine whether any significant differences exist in the occurrence of phlebitis between catheters of 20 gauge or smaller and those larger than 20 gauge, between catheters inserted in the antecubital fossa and those inserted in other locations on the upper limbs, or between catheters inserted for more than 96 hours and those inserted for 96 hours or less. Using a systematic approach, we searched for literature published between 2006 and 2017 in the Cumulative Index to Nursing and Allied Health Literature (CINAHL), PubMed, ProQuest, and Cochrane Library databases. We used Comprehensive Meta-analysis Version 2 to perform our meta-analysis. After the screening and review processes, we identified 17 studies that met our selection conditions. Among these studies, 14 contained complete data for meta-analysis. These studies involved 4,343 patients and 5,846 PVCs. Regarding the overall effect size in the meta-analysis, the results of the forest plot comparing catheters of 20 gauge or smaller and those larger than 20 gauge presented a risk ratio (RR) of 0.88 (95% confidence interval [0.67, 1.17], p = .380), indicating no statistically significant difference in the occurrence of phlebitis between catheters of the aforementioned gauges. The results of the forest plot comparing catheters inserted in the antecubital fossa and those inserted in other locations on the upper limbs presented an RR of 1.05 (95% confidence interval [0.82, 1.34], p = .696), indicating no statistically significant difference in

  11. Species occurrence data for the nation

    USGS Publications Warehouse

    ,

    2015-09-28

    BISON's size is unprecedented, including records for most living species found in the U.S. and encompassing the efforts of more than a million professional and citizen scientists. And the vast majority of BISON's species occurrence records are specific locations, not just county or state records.

  12. Patterns and determinants of mammal species occurrence in India

    USGS Publications Warehouse

    Karanth, K.K.; Nichols, J.D.; Hines, J.E.; Karanth, K.U.; Christensen, N.L.

    2009-01-01

    Many Indian mammals face range contraction and extinction, but assessments of their population status are hindered by the lack of reliable distribution data and range maps. 2. We estimated the current geographical ranges of 20 species of large mammals by applying occupancy models to data from country-wide expert. We modelled species in relation to ecological and social covariates (protected areas, landscape characteristics and human influences) based on a priori hypotheses about plausible determinants of mammalian distribution patterns. 3. We demonstrated that failure to incorporate detection probability in distribution survey methods underestimated habitat occupancy for all species. 4. Protected areas were important for the distribution of 16 species. However, for many species much of their current range remains unprotected. The availability of evergreen forests was important for the occurrence of 14 species, temperate forests for six species, deciduous forests for 15 species and higher altitude habitats for two species. Low human population density was critical for the occurrence of five species, while culturally based tolerance was important for the occurrence of nine other species. 5. Rhino Rhinoceros unicornis, gaur Bos gaurus and elephant Elephas maximus showed the most restricted ranges among herbivores, and sun bear Helarctos malayanus, brown bear Ursus arctos and tiger Panthera tigris were most restricted among carnivores. While cultural tolerance has helped the survival of some mammals, legal protection has been critically associated with occurrence of most species. 6. Synthesis and applications. Extent of range is an important determinant of species conservation status. Understanding the relationship of species occurrence with ecological and socio-cultural covariates is important for identification and management of key conservation areas. The combination of occupancy models with field data from country-wide experts enables reliable estimation of species

  13. Insights into Pleistocene palaeoenvironments and biostratigraphy in southern Buenos Aires province (Argentina) from continental deposits

    NASA Astrophysics Data System (ADS)

    Beilinson, E.; Gasparini, G. M.; Soibelzon, L. H.; Soibelzon, E.

    2015-07-01

    The coastal cliffs of the Buenos Aires province (Argentina) have been the subject of intense paleontological studies since the XIX century. Therefore, many of the type localities in which is based the late Cenozoic Pampean biostratigraphic/chronostratigraphic scheme are located in this area. In this context, the sedimentites that crop out near the mouth of the Chocorí Creek contain a set of palaeontological sites that, because of their richness and well-preserved fossil content, hold high national and international importance. The aims of the present contribution are: 1) to make a stratigraphic and sedimentological characterization of the study area; 2) to list the fauna outcropped at these palaeontological sites and establish a biostratigraphic framework; 3) to elaborate a palaeoenvironmental model for the area. The study interval was informally subdivided into a lower, middle and upper interval. Interpretation was based on the presence of a number of key features such as architectural elements; channel:overbank ratio and palaeosol occurrence. The first two intervals were interpreted as continental deposits of a fluvio-alluvial nature and are the focus of this paper. The upper interval was related to foreshore marine deposits and will be studied in a future contribution. The lower interval is characterized mainly by overbank architectural elements in which calcisols and argillic protosols were identified. Channel-fill deposits are isolated and surrounded by fine-grained overbank successions and sedimentary structures are suggestive of mixed-load transport. The contact between the lower and middle intervals is an irregular, highly erosive surface characterized by a significant vertical change in the facies. This surface defines the base of multistorey sandbodies which's internal arrangement alongside with the low participation of overbank deposits suggests deposition by a braided fluvial system. Palaeosols and vertebrate fossils were used as palaeoclimatic

  14. Analysis of co-occurrence toponyms in web pages based on complex networks

    NASA Astrophysics Data System (ADS)

    Zhong, Xiang; Liu, Jiajun; Gao, Yong; Wu, Lun

    2017-01-01

    A large number of geographical toponyms exist in web pages and other documents, providing abundant geographical resources for GIS. It is very common for toponyms to co-occur in the same documents. To investigate these relations associated with geographic entities, a novel complex network model for co-occurrence toponyms is proposed. Then, 12 toponym co-occurrence networks are constructed from the toponym sets extracted from the People's Daily Paper documents of 2010. It is found that two toponyms have a high co-occurrence probability if they are at the same administrative level or if they possess a part-whole relationship. By applying complex network analysis methods to toponym co-occurrence networks, we find the following characteristics. (1) The navigation vertices of the co-occurrence networks can be found by degree centrality analysis. (2) The networks express strong cluster characteristics, and it takes only several steps to reach one vertex from another one, implying that the networks are small-world graphs. (3) The degree distribution satisfies the power law with an exponent of 1.7, so the networks are free-scale. (4) The networks are disassortative and have similar assortative modes, with assortative exponents of approximately 0.18 and assortative indexes less than 0. (5) The frequency of toponym co-occurrence is weakly negatively correlated with geographic distance, but more strongly negatively correlated with administrative hierarchical distance. Considering the toponym frequencies and co-occurrence relationships, a novel method based on link analysis is presented to extract the core toponyms from web pages. This method is suitable and effective for geographical information retrieval.

  15. Biases in Planet Occurrence Caused by Unresolved Binaries in Transit Surveys

    NASA Astrophysics Data System (ADS)

    Bouma, L. G.; Masuda, Kento; Winn, Joshua N.

    2018-06-01

    Wide-field surveys for transiting planets, such as the NASA Kepler and TESS missions, are usually conducted without knowing which stars have binary companions. Unresolved and unrecognized binaries give rise to systematic errors in planet occurrence rates, including misclassified planets and mistakes in completeness corrections. The individual errors can have different signs, making it difficult to anticipate the net effect on inferred occurrence rates. Here, we use simplified models of signal-to-noise limited transit surveys to try and clarify the situation. We derive a formula for the apparent occurrence rate density measured by an observer who falsely assumes all stars are single. The formula depends on the binary fraction, the mass function of the secondary stars, and the true occurrence of planets around primaries, secondaries, and single stars. It also takes into account the Malmquist bias by which binaries are over-represented in flux-limited samples. Application of the formula to an idealized Kepler-like survey shows that for planets larger than 2 R ⊕, the net systematic error is of order 5%. In particular, unrecognized binaries are unlikely to be the reason for the apparent discrepancies between hot-Jupiter occurrence rates measured in different surveys. For smaller planets the errors are potentially larger: the occurrence of Earth-sized planets could be overestimated by as much as 50%. We also show that whenever high-resolution imaging reveals a transit host star to be a binary, the planet is usually more likely to orbit the primary star than the secondary star.

  16. Integrating occupancy models and structural equation models to understand species occurrence

    PubMed Central

    Joseph, Maxwell B.; Preston, Daniel L.; Johnson, Pieter T. J.

    2016-01-01

    Understanding the drivers of species occurrence is a fundamental goal in basic and applied ecology. Occupancy models have emerged as a popular approach for inferring species occurrence because they account for problems associated with imperfect detection in field surveys. Current models, however, are limited because they assume covariates are independent (i.e., indirect effects do not occur). Here, we combined structural equation and occupancy models to investigate complex influences on species occurrence while accounting for imperfect detection. These two methods are inherently compatible because they both provide means to make inference on latent or unobserved quantities based on observed data. Our models evaluated the direct and indirect roles of cattle grazing, water chemistry, vegetation, nonnative fishes, and pond permanence on the occurrence of six pond-breeding amphibians, two of which are threatened: the California tiger salamander (Ambystoma californiense), and the California red-legged frog (Rana draytonii). While cattle had strong effects on pond vegetation and water chemistry, their overall effects on amphibian occurrence were small compared to the consistently negative effects of nonnative fish. Fish strongly reduced occurrence probabilities for four of five native amphibians, including both species of conservation concern. These results could help to identify drivers of amphibian declines and to prioritize strategies for amphibian conservation. More generally, this approach facilitates a more mechanistic representation of ideas about the causes of species distributions in space and time. As shown here, occupancy modeling and structural equation modeling are readily combined, and bring rich sets of techniques that may provide unique theoretical and applied insights into basic ecological questions. PMID:27197402

  17. A "Coprolitic Vision' for Earth Science Education

    ERIC Educational Resources Information Center

    Clary, Renee M.; Wandersee, James H.

    2011-01-01

    William Buckland (1784-1846) first identified and scientifically studied coprolites in the early 1820s. Although some of his contemporaries did not look favorably upon him or his research, Buckland's early experiments advanced paleoecology and taphonomy. Because our informal presentations with coprolites resulted in students' spirited reactions,…

  18. Associating an ionospheric parameter with major earthquake occurrence throughout the world

    NASA Astrophysics Data System (ADS)

    Ghosh, D.; Midya, S. K.

    2014-02-01

    With time, ionospheric variation analysis is gaining over lithospheric monitoring in serving precursors for earthquake forecast. The current paper highlights the association of major (Ms ≥ 6.0) and medium (4.0 ≤ Ms < 6.0) earthquake occurrences throughout the world in different ranges of the Ionospheric Earthquake Parameter (IEP) where `Ms' is earthquake magnitude on the Richter scale. From statistical and graphical analyses, it is concluded that the probability of earthquake occurrence is maximum when the defined parameter lies within the range of 0-75 (lower range). In the higher ranges, earthquake occurrence probability gradually decreases. A probable explanation is also suggested.

  19. Algorithms for Hidden Markov Models Restricted to Occurrences of Regular Expressions

    PubMed Central

    Tataru, Paula; Sand, Andreas; Hobolth, Asger; Mailund, Thomas; Pedersen, Christian N. S.

    2013-01-01

    Hidden Markov Models (HMMs) are widely used probabilistic models, particularly for annotating sequential data with an underlying hidden structure. Patterns in the annotation are often more relevant to study than the hidden structure itself. A typical HMM analysis consists of annotating the observed data using a decoding algorithm and analyzing the annotation to study patterns of interest. For example, given an HMM modeling genes in DNA sequences, the focus is on occurrences of genes in the annotation. In this paper, we define a pattern through a regular expression and present a restriction of three classical algorithms to take the number of occurrences of the pattern in the hidden sequence into account. We present a new algorithm to compute the distribution of the number of pattern occurrences, and we extend the two most widely used existing decoding algorithms to employ information from this distribution. We show experimentally that the expectation of the distribution of the number of pattern occurrences gives a highly accurate estimate, while the typical procedure can be biased in the sense that the identified number of pattern occurrences does not correspond to the true number. We furthermore show that using this distribution in the decoding algorithms improves the predictive power of the model. PMID:24833225

  20. Quantifying global dust devil occurrence from meteorological analyses

    PubMed Central

    Jemmett-Smith, Bradley C; Marsham, John H; Knippertz, Peter; Gilkeson, Carl A

    2015-01-01

    Dust devils and nonrotating dusty plumes are effective uplift mechanisms for fine particles, but their contribution to the global dust budget is uncertain. By applying known bulk thermodynamic criteria to European Centre for Medium-Range Weather Forecasts (ECMWF) operational analyses, we provide the first global hourly climatology of potential dust devil and dusty plume (PDDP) occurrence. In agreement with observations, activity is highest from late morning into the afternoon. Combining PDDP frequencies with dust source maps and typical emission values gives the best estimate of global contributions of 3.4% (uncertainty 0.9–31%), 1 order of magnitude lower than the only estimate previously published. Total global hours of dust uplift by dry convection are ∼0.002% of the dust-lifting winds resolved by ECMWF, consistent with dry convection making a small contribution to global uplift. Reducing uncertainty requires better knowledge of factors controlling PDDP occurrence, source regions, and dust fluxes induced by dry convection. Key Points Global potential dust devil occurrence quantified from meteorological analyses Climatology shows realistic diurnal cycle and geographical distribution Best estimate of global contribution of 3.4% is 10 times smaller than the previous estimate PMID:26681815

  1. The effect of evaluation on co-occurrence memory judgement.

    PubMed

    Bar-Anan, Yoav; Amzaleg-David, Efrat

    2014-01-01

    Three experiments tested the effect of an attitude towards an object on the memory judgement of whether this object co-occurred with positive versus negative stimuli. We induced positive or negative attitudes towards novel male stimuli, and paired each man with an equal number of positive and negative animals. In a memory test, participants reported more co-occurrences of same-valence man/animal pairs than opposite-valence pairs. This valence-compatibility effect occurred even when attitudes were induced after the pairing (Experiment 1), when participants knew that each man occurred with an equal number of positive and negative animals (Experiment 2), and in reports of clear memory of pairs that did not co-occur (Experiment 3). The present findings suggest that evaluation causes illusory correlation even when the co-occurring stimuli are not traits or behaviours attributed to the attitude object. The results question the validity of co-occurrence memory judgements as measures of co-occurrence awareness in evaluative conditioning (EC) research.

  2. Can arsenic occurrence rate in bedrock aquifers be predicted?

    USGS Publications Warehouse

    Yang, Qiang; Jung, Hun Bok; Marvinney, Robert G.; Culbertson, Charles W.; Zheng, Yan

    2012-01-01

    A high percentage (31%) of groundwater samples from bedrock aquifers in the greater Augusta area, Maine was found to contain greater than 10 μg L–1 of arsenic. Elevated arsenic concentrations are associated with bedrock geology, and more frequently observed in samples with high pH, low dissolved oxygen, and low nitrate. These associations were quantitatively compared by statistical analysis. Stepwise logistic regression models using bedrock geology and/or water chemistry parameters are developed and tested with external data sets to explore the feasibility of predicting groundwater arsenic occurrence rates (the percentages of arsenic concentrations higher than 10 μg L–1) in bedrock aquifers. Despite the under-prediction of high arsenic occurrence rates, models including groundwater geochemistry parameters predict arsenic occurrence rates better than those with bedrock geology only. Such simple models with very few parameters can be applied to obtain a preliminary arsenic risk assessment in bedrock aquifers at local to intermediate scales at other localities with similar geology.

  3. Can arsenic occurrence rates in bedrock aquifers be predicted?

    PubMed Central

    Yang, Qiang; Jung, Hun Bok; Marvinney, Robert G.; Culbertson, Charles W.; Zheng, Yan

    2012-01-01

    A high percentage (31%) of groundwater samples from bedrock aquifers in the greater Augusta area, Maine was found to contain greater than 10 µg L−1 of arsenic. Elevated arsenic concentrations are associated with bedrock geology, and more frequently observed in samples with high pH, low dissolved oxygen, and low nitrate. These associations were quantitatively compared by statistical analysis. Stepwise logistic regression models using bedrock geology and/or water chemistry parameters are developed and tested with external data sets to explore the feasibility of predicting groundwater arsenic occurrence rates (the percentages of arsenic concentrations higher than 10 µg L−1) in bedrock aquifers. Despite the under-prediction of high arsenic occurrence rates, models including groundwater geochemistry parameters predict arsenic occurrence rates better than those with bedrock geology only. Such simple models with very few parameters can be applied to obtain a preliminary arsenic risk assessment in bedrock aquifers at local to intermediate scales at other localities with similar geology. PMID:22260208

  4. Combining occurrence and abundance distribution models for the conservation of the Great Bustard.

    PubMed

    Mi, Chunrong; Huettmann, Falk; Sun, Rui; Guo, Yumin

    2017-01-01

    Species distribution models (SDMs) have become important and essential tools in conservation and management. However, SDMs built with count data, referred to as species abundance models (SAMs), are still less commonly used to date, but increasingly receiving attention. Species occurrence and abundance do not frequently display similar patterns, and often they are not even well correlated. Therefore, only using information based on SDMs or SAMs leads to an insufficient or misleading conservation efforts. How to combine information from SDMs and SAMs and how to apply the combined information to achieve unified conservation remains a challenge. In this study, we introduce and propose a priority protection index (PI). The PI combines the prediction results of the occurrence and abundance models. As a case study, we used the best-available presence and count records for an endangered farmland species, the Great Bustard ( Otis tarda dybowskii ), in Bohai Bay, China. We then applied the Random Forest algorithm (Salford Systems Ltd. Implementation) with eleven predictor variables to forecast the spatial occurrence as well as the abundance distribution. The results show that the occurrence model had a decent performance (ROC: 0.77) and the abundance model had a RMSE of 26.54. It is noteworthy that environmental variables influenced bustard occurrence and abundance differently. The area of farmland, and the distance to residential areas were the top important variables influencing bustard occurrence. While the distance to national roads and to expressways were the most important influencing abundance. In addition, the occurrence and abundance models displayed different spatial distribution patterns. The regions with a high index of occurrence were concentrated in the south-central part of the study area; and the abundance distribution showed high populations occurrence in the central and northwestern parts of the study area. However, combining occurrence and abundance

  5. Combining occurrence and abundance distribution models for the conservation of the Great Bustard

    PubMed Central

    Mi, Chunrong; Huettmann, Falk; Sun, Rui

    2017-01-01

    Species distribution models (SDMs) have become important and essential tools in conservation and management. However, SDMs built with count data, referred to as species abundance models (SAMs), are still less commonly used to date, but increasingly receiving attention. Species occurrence and abundance do not frequently display similar patterns, and often they are not even well correlated. Therefore, only using information based on SDMs or SAMs leads to an insufficient or misleading conservation efforts. How to combine information from SDMs and SAMs and how to apply the combined information to achieve unified conservation remains a challenge. In this study, we introduce and propose a priority protection index (PI). The PI combines the prediction results of the occurrence and abundance models. As a case study, we used the best-available presence and count records for an endangered farmland species, the Great Bustard (Otis tarda dybowskii), in Bohai Bay, China. We then applied the Random Forest algorithm (Salford Systems Ltd. Implementation) with eleven predictor variables to forecast the spatial occurrence as well as the abundance distribution. The results show that the occurrence model had a decent performance (ROC: 0.77) and the abundance model had a RMSE of 26.54. It is noteworthy that environmental variables influenced bustard occurrence and abundance differently. The area of farmland, and the distance to residential areas were the top important variables influencing bustard occurrence. While the distance to national roads and to expressways were the most important influencing abundance. In addition, the occurrence and abundance models displayed different spatial distribution patterns. The regions with a high index of occurrence were concentrated in the south-central part of the study area; and the abundance distribution showed high populations occurrence in the central and northwestern parts of the study area. However, combining occurrence and abundance indices

  6. Occurrence of pneumomediastinum due to dental procedures.

    PubMed

    Aslaner, Mehmet Ali; Kasap, Gül Nihal; Demir, Cihat; Akkaş, Meltem; Aksu, Nalan M

    2015-01-01

    The occurrence of pneumomediastinum and massive subcutaneous emphysema due to dental procedures is quite rare. We present a case of pneumomediastinum and massive subcutaneous emphysema that occurred during third molar tooth extraction with air-turbine handpiece.

  7. Precipitation and the occurrence of lyme disease in the Northeastern United States

    USGS Publications Warehouse

    McCabe, G.J.; Bunnell, J.E.

    2004-01-01

    The occurrence of Lyme disease is a growing concern in the United States, and various studies have been performed to understand the factors related to Lyme disease occurrence. In the United States, Lyme disease has occurred most frequently in the northeastern United States. Positive correlations between the number of cases of Lyme disease reported in the northeastern United States during the 1992-2002 period indicate that late spring/early summer precipitation was a significant climate factor affecting the occurrence of Lyme disease. When late spring/early summer precipitation was greater than average, the occurrence of Lyme disease was above average, possibly due to increased tick activity and survival rate during wet conditions. Temperature did not seem to explain the variability in Lyme disease reports for the northeastern United States. ?? Mary Ann Liebert, Inc.

  8. Occurrence of the megatoothed sharks (Lamniformes: Otodontidae) in Alabama, USA.

    PubMed

    Ehret, Dana J; Ebersole, Jun

    2014-01-01

    The Otodontidae include some of the largest sharks to ever live in the world's oceans (i.e., Carcharocles megalodon). Here we report on Paleocene and Eocene occurrences of Otodus obliquus and Carcharocles auriculatus from Alabama, USA. Teeth of Otodus are rarely encountered in the Gulf Coastal Plain and this report is one of the first records for Alabama. Carcharocles auriculatus is more common in the Eocene deposits of Alabama, but its occurrence has been largely overlooked in the literature. We also refute the occurrence of the Oligocene Carcharocles angustidens in the state. Raised awareness and increased collecting of under-sampled geologic formations in Alabama will likely increase sample sizes of O. obliquus and C. auriculatus and also might unearth other otodontids, such as C. megalodon and C. chubutensis.

  9. Occurrence of the megatoothed sharks (Lamniformes: Otodontidae) in Alabama, USA

    PubMed Central

    Ebersole, Jun

    2014-01-01

    The Otodontidae include some of the largest sharks to ever live in the world’s oceans (i.e., Carcharocles megalodon). Here we report on Paleocene and Eocene occurrences of Otodus obliquus and Carcharocles auriculatus from Alabama, USA. Teeth of Otodus are rarely encountered in the Gulf Coastal Plain and this report is one of the first records for Alabama. Carcharocles auriculatus is more common in the Eocene deposits of Alabama, but its occurrence has been largely overlooked in the literature. We also refute the occurrence of the Oligocene Carcharocles angustidens in the state. Raised awareness and increased collecting of under-sampled geologic formations in Alabama will likely increase sample sizes of O. obliquus and C. auriculatus and also might unearth other otodontids, such as C. megalodon and C. chubutensis. PMID:25332848

  10. Reconstructing the palaeoenvironments of the early Pleistocene mammal faunas from the pollen preserved on fossil bones

    NASA Astrophysics Data System (ADS)

    Ravazzi, Cesare; Pini, Roberta; Breda, Marzia

    2009-12-01

    We carried out a systematic investigation on the pollen content of sediment adhering to skeletal elements of large mammals which originate from the long lacustrine record of Leffe (Early Pleistocene of the Italian Alps). Three local faunas were discovered during mining activities along the intermediate part (spanning from 1.5 to 0.95 Ma) of the basin succession. The excellent pollen preservation allowed testing the reproducibility of the pollen signal from single skeletons. A clear palaeoenvironmental patterning, consistent with the ecological preferences of the considered mammal species, emerged from the canonical correspondence analysis of pollen types diagnostic for vegetation communities. Edaphic factors related to seasonal river activity changes and to the development of swamp forests in the riverbanks are significantly associated to the occurrences of Hippopotamus cf. antiquus, whereas finds of Mammuthus meridionalis belong to fully forested landscapes dominated by conifer or mixed forests of oceanic, warm to cool-temperate climate. Rhinoceros habitats include variable forest cover under different climate states. Distinct cool-temperate, partially open vegetation could be recognized for large deer included Cervalces cf carnutorum. A palynostratigraphic correlation between individual spectra and a reference palynostratigraphic record allowed assignment of many fossil remains to a precise stratigraphic position. This procedure also shown that the Leffe local faunas include specimens accumulated under different environmental and climate states, as a consequence of high-frequency climate changes characterizing the Late Villafranchian Early Pleistocene.

  11. THE OCCURRENCE RATE OF SMALL PLANETS AROUND SMALL STARS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dressing, Courtney D.; Charbonneau, David, E-mail: cdressing@cfa.harvard.edu

    We use the optical and near-infrared photometry from the Kepler Input Catalog to provide improved estimates of the stellar characteristics of the smallest stars in the Kepler target list. We find 3897 dwarfs with temperatures below 4000 K, including 64 planet candidate host stars orbited by 95 transiting planet candidates. We refit the transit events in the Kepler light curves for these planet candidates and combine the revised planet/star radius ratios with our improved stellar radii to revise the radii of the planet candidates orbiting the cool target stars. We then compare the number of observed planet candidates to themore » number of stars around which such planets could have been detected in order to estimate the planet occurrence rate around cool stars. We find that the occurrence rate of 0.5-4 R{sub Circled-Plus} planets with orbital periods shorter than 50 days is 0.90{sup +0.04}{sub -0.03} planets per star. The occurrence rate of Earth-size (0.5-1.4 R{sub Circled-Plus }) planets is constant across the temperature range of our sample at 0.51{sub -0.05}{sup +0.06} Earth-size planets per star, but the occurrence of 1.4-4 R{sub Circled-Plus} planets decreases significantly at cooler temperatures. Our sample includes two Earth-size planet candidates in the habitable zone, allowing us to estimate that the mean number of Earth-size planets in the habitable zone is 0.15{sup +0.13}{sub -0.06} planets per cool star. Our 95% confidence lower limit on the occurrence rate of Earth-size planets in the habitable zones of cool stars is 0.04 planets per star. With 95% confidence, the nearest transiting Earth-size planet in the habitable zone of a cool star is within 21 pc. Moreover, the nearest non-transiting planet in the habitable zone is within 5 pc with 95% confidence.« less

  12. Forecasting Occurrences of Activities.

    PubMed

    Minor, Bryan; Cook, Diane J

    2017-07-01

    While activity recognition has been shown to be valuable for pervasive computing applications, less work has focused on techniques for forecasting the future occurrence of activities. We present an activity forecasting method to predict the time that will elapse until a target activity occurs. This method generates an activity forecast using a regression tree classifier and offers an advantage over sequence prediction methods in that it can predict expected time until an activity occurs. We evaluate this algorithm on real-world smart home datasets and provide evidence that our proposed approach is most effective at predicting activity timings.

  13. Systematics, phylogeny, and taphonomy of ghost shrimps (Decapoda): a perspective from the fossil record

    PubMed Central

    Klompmaker, Adiël A.

    2016-01-01

    Ghost shrimps of Callianassidae and Ctenochelidae are soft-bodied, usually heterochelous decapods representing major bioturbators of muddy and sandy (sub)marine substrates. Ghost shrimps have a robust fossil record spanning from the Early Cretaceous (~ 133 Ma) to the Holocene and their remains are present in most assemblages of Cenozoic decapod crustaceans. Their taxonomic interpretation is in flux, mainly because the generic assignment is hindered by their insufficient preservation and disagreement in the biological classification. Furthermore, numerous taxa are incorrectly classified within the catch-all taxon Callianassa. To show the historical patterns in describing fossil ghost shrimps and to evaluate taphonomic aspects influencing the attribution of ghost shrimp remains to higher level taxa, a database of all fossil species treated at some time as belonging to the group has been compiled: 250 / 274 species are considered valid ghost shrimp taxa herein. More than half of these taxa (160 species, 58.4%) are known only from distal cheliped elements, i.e., dactylus and / or propodus, due to the more calcified cuticle locally. Rarely, ghost shrimps are preserved in situ in burrows or in direct association with them, and several previously unpublished occurrences are reported herein. For generic assignment, fossil material should be compared to living species because many of them have modern relatives. Heterochely, intraspecific variation, ontogenetic changes and sexual dimorphism are all factors that have to be taken into account when working with fossil ghost shrimps. Distal elements are usually more variable than proximal ones. Preliminary results suggest that the ghost shrimp clade emerged not before the Hauterivian (~ 133 Ma). The divergence of Ctenochelidae and Paracalliacinae is estimated to occur within the interval of Hauterivian to Albian (133–100 Ma). Callichirinae and Eucalliacinae likely diverged later during the Late Cretaceous (100–66 Ma

  14. Crossing seas and occurrence of rogue waves

    NASA Astrophysics Data System (ADS)

    Bitner-Gregersen, Elzbieta; Toffoli, Alessandro

    2017-04-01

    The study is addressing crossing wave systems which may lead to formation of rogue waves. Onorato et al. (2006, 2010) have shown using the Nonlinear Schr?dringer (NLS) equations that the modulational instability and rogue waves can be triggered by a peculiar form of directional sea state, where two identical, crossing, narrow-banded random wave systems interact with each other. Such results have been underpinned by numerical simulations of the Euler equations solved with a Higher Order Spectral Method (HOSM) and experimental observations (Toffoli et al., 2011). They substantiate a dependence of the angle between the mean directions of propagation of the two crossing wave systems, with a maximum rogue wave probability for angles of approximately 40 degrees. Such an unusual sea state of two almost identical wave systems (approximately the same significant wave height and mean frequency) with high steepness and different directions was observed during the accident to the cruise ship Louis Majesty (Cavaleri et al. 2012). Occurrence of wind sea and swell having almost the same spectral period and significant wave height and crossing at the angle 40o < β < 60o has been investigated recently by Bitner-Gregersen and Toffoli (2014). The numerical simulations carried out by HOSM have shown that although directionality has an effect on the occurrence of extreme waves in crossing seas, rogue waves can occur not only for narrow-banded wave directional spreading but also broader spectral conditions. It seems that the most critical condition for occurrence of rogue waves in crossing seas is associated with energy and frequency of two wave systems while the angle between the wave systems and directional spreading will decide how large extreme waves will grow. The 40 degree angle and narrow-banded directional spreading seem to be generating the largest waves. The study shows that occurrence of rogue-prone crossing sea states is location specific, depending strongly on local

  15. Occurrence of oculomotor dysfunctions in acquired brain injury: a retrospective analysis.

    PubMed

    Ciuffreda, Kenneth J; Kapoor, Neera; Rutner, Daniella; Suchoff, Irwin B; Han, M E; Craig, Shoshana

    2007-04-01

    The purpose of this retrospective study was to determine the frequency of occurrence of oculomotor dysfunctions in a sample of ambulatory outpatients who have acquired brain injury (ABI), either traumatic brain injury (TBI) or cerebrovascular accident (CVA), with associated vision symptoms. Medical records of 220 individuals with either TBI (n = 160) or CVA (n = 60) were reviewed retrospectively. This was determined by a computer-based query spanning the years 2000 through 2003, for the frequency of occurrence of oculomotor dysfunctions including accommodation, version, vergence, strabismus, and cranial nerve (CN) palsy. The majority of individuals with either TBI (90%) or CVA (86.7%) manifested an oculomotor dysfunction. Accommodative and vergence deficits were most common in the TBI subgroup, whereas strabismus and CN palsy were most common in the CVA subgroup. The frequency of occurrence of versional deficits was similar in each diagnostic subgroup. These new findings should alert the clinician to the higher frequency of occurrence of oculomotor dysfunctions in these populations and the associated therapeutic, rehabilitative, and quality-of-life implications.

  16. A compilation of mineral occurrences and the relationship of occurrences to structural elements of the Kentucky and Tennessee region

    NASA Technical Reports Server (NTRS)

    Mayhew, M. A.; Myers, D. M.

    1984-01-01

    A very prominent magnetic anomaly measured by MAGSAT over the eastern mid-continent of the United States was inferred to have a source region beneath Kentucky and Tennessee. Prominent aeromagnetic and gravity anomalies are also associated with the inferred source region. A crustal model constructed to fit these anomalies interpreted the complex as a large mafic plutonic intrusion of Precambrian age. The complex was named the Kentucky body. It was noticed that the Jessamine Dome, which is a locus of intense faulting and mineralization, occurs near the northern end of the Kentucky body, and that more generally there seemed to be a spatial relationship between mineral occurrence and the body. The relationship between mineral deposits in Kentucky and Tennessee and the Kentucky body was investigated. A compilation of mineral occurrences in the region, classified according to type and age, is presented.

  17. Predictors of seizure occurrence in children undergoing pre-surgical monitoring.

    PubMed

    Harini, Chellamani; Singh, Kanwaljit; Takeoka, Masanori; Parulkar, Isha; Bergin, Ann Marie; Loddenkemper, Tobias; Kothare, Sanjeev V

    2013-10-01

    Long-Term-Monitoring (LTM) is a valuable tool for seizure localization/lateralization among children with refractory-epilepsy undergoing pre-surgical-monitoring. The aim of this study was to examine the factors predicting occurrence of single/multiple seizures in children undergoing pre-surgical monitoring in the LTM unit. Chart review was done on 95 consecutive admissions on 92 children (40 females) admitted to the LTM-unit for pre-surgical workup. Relationship between occurrence of multiple (≥ 3) seizures and factors such as home seizure-frequency, demographics, MRI-lesions/seizure-type and localization/AED usage/neurological-exam/epilepsy-duration was evaluated by logistic-regression and survival-analysis. Home seizure-frequency was further categorized into low (up-to 1/month), medium (up-to 1/week) and high (>1/week) and relationship of these categories to the occurrence of multiple seizures was evaluated. Mean length of stay was 5.24 days in all 3 groups. Home seizure frequency was the only factor predicting the occurrence of single/multiple seizures in children undergoing presurgical workup. Other factors (age/sex/MRI-lesions/seizure-type and localization/AED-usage/neurological-exam/epilepsy-duration) did not affect occurrence of single/multiple seizures or time-to-occurrence of first/second seizure. Analysis of the home-seizure frequency categories revealed that 98% admissions in high-frequency, 94% in the medium, and 77% in low-frequency group had at-least 1 seizure recorded during the monitoring. Odds of first-seizure increased in high vs. low-frequency group (p=0.01). Eighty-nine percent admissions in high-frequency, 78% in medium frequency, versus 50% in low-frequency group had ≥ 3 seizures. The odds of having ≥ 3 seizures increased in high-frequency (p=0.0005) and in medium-frequency (p=0.007), compared to low-frequency group. Mean time-to-first-seizure was 2.7 days in low-frequency, 2.1 days in medium, and 2 days in high-frequency group. Time

  18. Occurrences of uranium at Clinton, Hunterdon County, New Jersey

    USGS Publications Warehouse

    McKeown, F.A.; Klemic, H.; Choquette, P.W.

    1954-01-01

    An occurrence of uranium at Clinton, Hunterdon County, N. J. was first brought to the attention of the U.S. Geological Survey when Mr. Thomas L. Eak of Avenel, N. J. submitted to the Survey a sample containing 0.068 percent uranium. Subsequent examinations of the area around Clinton indicated that detailed mapping and study were warranted. The uranium occurrences at Clinton are in or associated with fault zones in the Kittatinny limestone of Cambro-Ordovician age. The limestone generally light gray, thick bedded, and dolomitic; chert is common but not abundant. Regionally and locally, faults are the most significant structural features. The local faults at Clinton are the loci for most of the uranium. The largest fault can be traced for about 700 feet and is radioactive everywhere it crops out. Samples from this fault contain as much as 0.038 percent uranium; the average content is about 0.010 percent uranium. Uranium also occurs disseminated in two 4-inch layers of black feldspathic dolomite and in several zones of residual soil derived from the Kittatinny limestone. The black layers contain as much as 0.046 percent uranium and can be traced only about 20 feet along strike. They are cut by a small fault that is also radioactive. The radioactive soil zones are roughly elongated parallel to bedding. Soil from them contains up to 0.008 percent uranium. The uranium occurrences are best explained by a supergene origin. The sampling, mapping, and radioactivity testing of uranium occurrences at Clinton indicate they are too low grade to be of current economic interest.

  19. Investigating species co-occurrence patterns when species are detected imperfectly

    USGS Publications Warehouse

    MacKenzie, D.I.; Bailey, L.L.; Nichols, J.D.

    2004-01-01

    1. Over the last 30 years there has been a great deal of interest in investigating patterns of species co-occurrence across a number of locations, which has led to the development of numerous methods to determine whether there is evidence that a particular pattern may not have occurred by random chance. 2. A key aspect that seems to have been largely overlooked is the possibility that species may not always be detected at a location when present, which leads to 'false absences' in a species presence/absence matrix that may cause incorrect inferences to be made about co-occurrence patterns. Furthermore, many of the published methods for investigating patterns of species co-occurrence do not account for potential differences in the site characteristics that may partially (at least) explain non-random patterns (e.g. due to species having similar/different habitat preferences). 3. Here we present a statistical method for modelling co-occurrence patterns between species while accounting for imperfect detection and site characteristics. This method requires that multiple presence/absence surveys for the species be conducted over a reasonably short period of time at most sites. The method yields unbiased estimates of probabilities of occurrence, and is practical when the number of species is small (< 4). 4. To illustrate the method we consider data collected on two terrestrial salamander species, Plethodonjordani and members of the Plethodon glutinosus complex, collected in the Great Smoky Mountains National Park, USA. We find no evidence that the species do not occur independently at sites once site elevation has been allowed for, although we find some evidence of a statistical interaction between species in terms of detectability that we suggest may be due to changes in relative abundances.

  20. Occurrence of veterinary pharmaceuticals in the aquatic environment in Flanders

    NASA Astrophysics Data System (ADS)

    Servaes, K.; Vanermen, G.; Seuntjens, P.

    2009-04-01

    There is a growing interest in the occurrence of pharmaceuticals in the aquatic environment. Pharmaceuticals are classified as so-called ‘emerging pollutants'. ‘Emerging pollutants' are not necessarily new chemical compounds. Often these compounds are already present in the environment for a long time. But, their occurrence and especially their impact on the environment has only recently become clear. Consequently, data on their occurrence are rather scarce. In this study, we focus on the occurrence of veterinary pharmaceuticals in surface water in Flanders. We have only considered active substances administered to cattle, pigs and poultry. Based on the literature and information concerning the use in Belgium, a selection of 25 veterinary pharmaceuticals has been made. This selection consists of the most important antibiotics and antiparasitic substances applied in veterinary medicine in Belgium. We develop an analytical methodology based on UPLC-MS/MS for the detection of these veterinary pharmaceuticals in surface water. Therefore, the mass characteristics as well as the optimum LC conditions will be determined. To obtain limits of detection as low as possible, the samples are concentrated prior to analysis using solid phase extraction (SPE). Different SPE cartridges will be tested during the method development. At first, this SPE sample pre-treatment is performed off-line. In a next step, online SPE is optimized for this purpose. The analytical procedure will be subject to an in-house validation study, thereby determining recovery, repeatability (% RSD), limits of detection and limits of quantification. Finally, the developed methodology will be applied for monitoring the occurrence of veterinary pharmaceuticals in surface water and groundwater in Flanders. These water samples will be taken in areas characterized by intensive cattle breeding. Moreover, the samples will be collected during springtime. In this season, farmers apply manure, stored during winter

  1. 75 FR 54889 - Draft Guidance for Industry on Suicidality: Prospective Assessment of Occurrence in Clinical...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-09

    ...] Draft Guidance for Industry on Suicidality: Prospective Assessment of Occurrence in Clinical Trials...: Prospective Assessment of Occurrence in Clinical Trials.'' The purpose of this guidance is to assist sponsors in prospectively assessing the occurrence of treatment-emergent suicidality in clinical trials of...

  2. Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape.

    PubMed

    Moreira-Arce, Dario; Vergara, Pablo M; Boutin, Stan

    2015-01-01

    Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250 m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250 m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500 m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants

  3. Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape

    PubMed Central

    Moreira-Arce, Dario; Vergara, Pablo M.; Boutin, Stan

    2015-01-01

    Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants and

  4. Preliminary summary review of thorium-bearing mineral occurrences in Alaska

    USGS Publications Warehouse

    Bates, Robert G.; Wedow, Helmuth

    1952-01-01

    Thorium-bearing minerals are known at 47 localities in Alaska. At these localities the thorium occurs as a major constituent or in minor amounts as an impurity in one or more of the following 12 minerals: allanite, columbite, ellsworthite, eschynite, gummite, monazite, orangite, parisite, thorianite, thorite, xenotime, and zircon. In addition other minerals, such as biotite and sphene, are radioactive and may contain thorium. Several unidentified columbate minerals with uranium or thorium and uranium as major constituents have been recognized at some localities. The distribution, by type of deposit, of the 57 thorium occurrences is as follows: lode - 3, lode and placer - 1, granitic rock - 3, granitic rock and related placer - 14, and placer - 26. Of the four lode occurrences only the radioactive veins at Salmon Bay in southeastern Alaska and the contact metamorphic deposit in the Nixon Fork area of central Alaska warrant further consideration, although insufficient data are available to determine whether these two deposits have commercial possibilities. The remaining occurrences of thorium-bearing minerals in Alaska are limited to placer deposits and disseminations of accessory minerals in granitic rocks. In most of these occurrences the thorium-bearing minerals occur in only trace amounts and consequently warrent little further consideration. More data are needed to determine the possibilities of byproduct recovery of thorium-bearing minerals from several of the gold and tin placers.

  5. Review: Occurrence of the pathogenic amoeba Naegleria fowleri in groundwater

    NASA Astrophysics Data System (ADS)

    Bright, Kelly R.; Gerba, Charles P.

    2017-06-01

    Naegleria fowleri is a thermophilic free-living amoeba found worldwide in soils and warm freshwater. It is the causative agent of primary amebic meningoencephalitis, a nearly always fatal disease afflicting mainly children and young adults. Humans are exposed to the organism via swimming, bathing, or other recreational activity during which water is forcefully inhaled into the upper nasal passages. Although many studies have looked at the occurrence of N. fowleri in surface waters, limited information is available regarding its occurrence in groundwater and geothermally heated natural waters such as hot springs. This paper reviews the current literature related to the occurrence of N. fowleri in these waters and the methods employed for its detection. Case reports of potential groundwater exposures are also included. Despite increased interest in N. fowleri in recent years due to well-publicized cases linked to drinking water, many questions still remain unanswered. For instance, why the organism persists in some water sources and not in others is not well understood. The role of biofilms in groundwater wells and plumbing in individual buildings, and the potential for warming due to climate change to expand the occurrence of the organism into new regions, are still unclear. Additional research is needed to address these questions in order to better understand the ecology of N. fowleri and the conditions that result in greater risks to bathers.

  6. Mineral occurrences of New York State with selected references to each locality

    USGS Publications Warehouse

    Luedke, Elaine M.; Wrucke, Chester T.; Graham, John A.

    1959-01-01

    References and locations were compiled for more than 1,000 mineral occurrences in New York State. Each occurrence is shown on an accompanying map and is given by commodity and county in a locality list. Fuels, sand and gravel, and clay are not included in this report.

  7. Niche modelling of marsh plants based on occurrence and abundance data.

    PubMed

    Lou, Yanjing; Gao, Chuanyu; Pan, Yanwen; Xue, Zhenshan; Liu, Ying; Tang, Zhanhui; Jiang, Ming; Lu, Xianguo; Rydin, Håkan

    2018-03-01

    The information of species' response (optimum or critical limits along environmental gradients) is a key to understanding ecological questions and to design management plans. A large number of plots (762) from 70 transects of 13 wetland sites in Northeast China were sampled along flooding gradient from marsh to wet meadow. Species response (abundance and occurrence) to flooding were modelled with Generalized Additive Models for 21 dominant plant species. We found that 20 of 21 species showed a significant response to flooding for the occurrence and abundance models, and four types of response were found: monotonically increasing, monotonically decreasing, skewed unimodal and symmetric unimodal. The species with monotonically increasing response have the deepest flooding optimum and widest niche width, followed by those with unimodal curve, and the monotonically decreasing ones have the smallest values. The optima and niche width (whether based on occurrence or abundance models) both significantly correlated with the frequency, but not with mean abundance. Abundance models outperformed occurrence models based on goodness of fit. The abundance models predicted a rather sharp shift from dominance of helophytes (Carex pseudo-curaica and C. lasiocarpa) to wet meadow species (Calamagrostis angustifolia and Carex appendiculata) if water levels drop from about 10cm above soil surface to below the surface. The defined optima and niche width based on the abundance models can be applied to better instruct restoration management. Given the time required to collect abundance data, an efficient strategy could be to monitor occurrence in many plots and abundance in a subset of these. Copyright © 2017 Elsevier B.V. All rights reserved.

  8. A simple physical model for deep moonquake occurrence times

    USGS Publications Warehouse

    Weber, R.C.; Bills, B.G.; Johnson, C.L.

    2010-01-01

    The physical process that results in moonquakes is not yet fully understood. The periodic occurrence times of events from individual clusters are clearly related to tidal stress, but also exhibit departures from the temporal regularity this relationship would seem to imply. Even simplified models that capture some of the relevant physics require a large number of variables. However, a single, easily accessible variable - the time interval I(n) between events - can be used to reveal behavior not readily observed using typical periodicity analyses (e.g., Fourier analyses). The delay-coordinate (DC) map, a particularly revealing way to display data from a time series, is a map of successive intervals: I(n+. 1) plotted vs. I(n). We use a DC approach to characterize the dynamics of moonquake occurrence. Moonquake-like DC maps can be reproduced by combining sequences of synthetic events that occur with variable probability at tidal periods. Though this model gives a good description of what happens, it has little physical content, thus providing only little insight into why moonquakes occur. We investigate a more mechanistic model. In this study, we present a series of simple models of deep moonquake occurrence, with consideration of both tidal stress and stress drop during events. We first examine the behavior of inter-event times in a delay-coordinate context, and then examine the output, in that context, of a sequence of simple models of tidal forcing and stress relief. We find, as might be expected, that the stress relieved by moonquakes influences their occurrence times. Our models may also provide an explanation for the opposite-polarity events observed at some clusters. ?? 2010.

  9. Occurrence and Characterization Microstructure of Iron Impurities in Halloysite.

    PubMed

    Liu, Rong; Yan, Chunjie; Wang, Hongquan; Xiao, Guoqi; Tu, Dong

    2015-09-01

    The quality of the clays and over all halloysite are mostly associated with minor amounts of ferruginous impurities content, since this element gives an undesirable reddish color to the halloysite mineral. Hence, finding out the modes of occurrence of iron in halloysite is of prime importance in the value addition and optimum utilization of halloysite. In order to analyze the occurrence of iron impurities in halloysite, Transmission Electron Microscopy (TEM), X-ray diffraction (XRD) and X-ray photoelectron spectroscopy (XPS) were combined with wet chemical analysis methods to study the low-grade halloysite. The results indicated that the mineral phases of iron impurities in the concentrates are mainly composed of amounts of magnetite, goethite and hematite. Two types of occurrences for iron impurities have been found. One is single crystalline mineral consist in the halloysite, which contains three different phases of Goethite FeO(OH) (44.75%), Magnetite Fe3O4 (27.43%) and Hematite Fe2O3 (31.96%). The other is amorphous Fe-Al-Si glial materials. This study is of significance in the theoretical research on the halloysite mineralogy and in the developmental practice of halloysite in coal measures.

  10. Statistical physics approach to earthquake occurrence and forecasting

    NASA Astrophysics Data System (ADS)

    de Arcangelis, Lucilla; Godano, Cataldo; Grasso, Jean Robert; Lippiello, Eugenio

    2016-04-01

    There is striking evidence that the dynamics of the Earth crust is controlled by a wide variety of mutually dependent mechanisms acting at different spatial and temporal scales. The interplay of these mechanisms produces instabilities in the stress field, leading to abrupt energy releases, i.e., earthquakes. As a consequence, the evolution towards instability before a single event is very difficult to monitor. On the other hand, collective behavior in stress transfer and relaxation within the Earth crust leads to emergent properties described by stable phenomenological laws for a population of many earthquakes in size, time and space domains. This observation has stimulated a statistical mechanics approach to earthquake occurrence, applying ideas and methods as scaling laws, universality, fractal dimension, renormalization group, to characterize the physics of earthquakes. In this review we first present a description of the phenomenological laws of earthquake occurrence which represent the frame of reference for a variety of statistical mechanical models, ranging from the spring-block to more complex fault models. Next, we discuss the problem of seismic forecasting in the general framework of stochastic processes, where seismic occurrence can be described as a branching process implementing space-time-energy correlations between earthquakes. In this context we show how correlations originate from dynamical scaling relations between time and energy, able to account for universality and provide a unifying description for the phenomenological power laws. Then we discuss how branching models can be implemented to forecast the temporal evolution of the earthquake occurrence probability and allow to discriminate among different physical mechanisms responsible for earthquake triggering. In particular, the forecasting problem will be presented in a rigorous mathematical framework, discussing the relevance of the processes acting at different temporal scales for different

  11. Predicting the Occurrence of Oxygenation Impairment in Patients with Type-B Acute Aortic Dissection

    PubMed Central

    Tomita, Kazunori; Hata, Noritake; Kobayashi, Nobuaki; Shinada, Takuro; Shirakabe, Akihiro

    2014-01-01

    Complicated respiratory failure requiring mechanical ventilation in patients with type-B acute aortic dissection (AAD) has been previously reported, and inflammatory reactions have been found to be associated with the occurrence of oxygenation impairment (OI). However, the possibility of predicting the occurrence of OI in patients with type-B AAD has not yet been evaluated. This study was performed to investigate the possibility of predicting the occurrence of OI in type-B AAD. In this study, 79 type-B AAD patients were enrolled to investigate the possibility of predicting the occurrence of OI. OI was defined as Po 2/Fio 2 ≤ 200. Patient characteristics, type of AAD, vital signs on admission, and the presence of inflammatory reactions obtained on admission day were evaluated. OI occurred in 39 patients (49%) on hospital day 2.5 ± 1.4 on average. Younger age, male gender, nonslender frame (body mass index ≥ 22 kg/m2), a relatively high maximum body temperature on the admission day (≥ 36.5°C), DeBakey IIIb type, patent false lumen, and lower Po 2/Fio 2 on admission were found to be associated with the occurrence of OI. Multivariate analysis revealed that nonslender frame, relatively high body temperature on the admission day, and lower Po 2/Fio 2 on admission were reliable for predicting the occurrence of oxygen impairment. The occurrence of OI in type-B AAD can be predicted in the clinical setting. PMID:24627618

  12. Global potential of dust devil occurrence

    NASA Astrophysics Data System (ADS)

    Jemmett-Smith, Bradley; Marsham, John; Knippertz, Peter; Gilkeson, Carl

    2014-05-01

    Mineral dust is a key constituent in the climate system. Airborne mineral dust forms the largest component of the global aerosol budget by mass and subsequently affects climate, weather and biogeochemical processes. There remains large uncertainty in the quantitative estimates of the dust cycle. Dry boundary-layer convection serves as an effective mechanism for dust uplift, typically through a combination of rotating dust devils and non-rotating larger and longer-lived convective plumes. These microscale dry-convective processes occur over length scales of several hundred metres or less. They are difficult to observe and model, and therefore their contribution to the global dust budget is highly uncertain. Using an analytical approach to extrapolate limited observations, Koch and Renno (2006) suggest that dust devils and plumes could contribute as much as 35%. Here, we use a new method for quantifying the potential of dust devil occurrence to provide an alternative perspective on this estimate. Observations have shown that dust devil and convective plume occurrence is favoured in hot arid regions under relatively weak background winds, large ground-to-air temperature gradients and deep dry convection. By applying such known constraints to operational analyses from the European Centre for Medium Range Weather Forecasts (ECMWF), we provide, to the best of the authors' knowledge, the first hourly estimates of dust devil occurrence including an analysis of sensitivity to chosen threshold uplift. The results show the expected diurnal variation and allow an examination of the seasonal cycle and day-to-day variations in the conditions required for dust devil formation. They confirm that desert regions are expected to have by far the highest frequency of dry convective vortices, with winds capable of dust uplift. This approach is used to test the findings of Koch and Renno (2006). Koch J., Renno N. (2006). The role of convective plumes and vortices on the global aerosol

  13. Late Miocene fossils from shallow marine sediments in Brunei Darussalam: systematics, palaeoenvironment and ecology.

    NASA Astrophysics Data System (ADS)

    Roslim, Amajida; Briguglio, Antonino; Kocsis, László; Ćorić, Stjepan; Razak, Hazirah

    2016-04-01

    The geology of Brunei Darussalam is fascinating but difficult to approach: rainforests and heavy precipitation tend to erode and smoothen the landscape limiting rocks exposure, whereas abundant constructions sites and active quarries allow the creation of short time available outcrop, which have to be immediately sampled. The stratigraphy of Brunei Darussalam comprises mainly Neogene sediments deposited in a wave to tide dominated shallow marine environment in a pure siliciclastic system. Thick and heavily bioturbated sandstone layers alternate to claystone beds which occasionally yield an extraordinary abundance and diversity of fossils. The sandstones, when not bioturbated, are commonly characterized by a large variety of sedimentary structures (e.g., ripple marks, planar laminations and cross beddings). In this study, we investigate the sediments and the fossil assemblages to record the palaeoenvironmental evolution of the shallow marine environment during the late Miocene, in terms of sea level change, chemostratigraphy and sedimentation rate. The study area is one of the best in terms of accessibility, extension, abundance and preservation of fossils; it is located in the region -'Bukit Ambug' (Ambug Hill), Tutong District. The fossils fauna collected encompasses mollusks, decapods, otoliths, shark and ray teeth, amber, foraminifera and coccolithophorids. In this investigation, sediment samples were taken along a section which measures 62.5 meters. A thick clay layer of 9 meters was sampled each 30 cm to investigate microfossils occurrences. Each sample was treated in peroxide and then sieved trough 63 μm, 150μm, 250μm, 450μm, 600μm, 1mm and 2mm sieves. Results point on the changes in biodiversity of foraminifera along the different horizons collected reflecting sea level changes and sediment production. The most abundant taxa identified are Pseoudorotalia schroeteriana, Ampistegina lessonii, Elphidium advenum, Quinqueloculina sp., Bolivina sp

  14. Reported historic asbestos prospects and natural asbestos occurrences in the central United States

    USGS Publications Warehouse

    Van Gosen, Bradley S.

    2006-01-01

    This map and its accompanying dataset provide information for 26 natural asbestos occurrences in the Central United States (U.S.), using descriptions found in the geologic literature. Data on location, mineralogy, geology, and relevant literature for each asbestos site are provided. Using the map and digital data in this report, the user can examine the distribution of previously reported asbestos occurrences and their geological characteristics in the Central U.S. This report is part of an ongoing study by the U.S. Geological Survey to identify and map reported natural asbestos occurrences in the U.S., which began with U.S. Geological Survey Open-File Report 2005-1189 (http://pubs.usgs.gov/of/2005/1189/). These reports are intended to provide State and local government agencies and other stakeholders with geologic information on natural occurrences of asbestos in the U.S.

  15. The Effects of Daily Co-Occurrence of Affect on Older Adults’ Reactivity to Health Stressors

    PubMed Central

    Ramsey, Jennifer L.; Neupert, Shevaun D.; Mroczek, Daniel K.; Spiro, Avron

    2015-01-01

    Objectives The present study examined age differences among older adults in the daily co-occurrence of affect and its potential role in buffering the negative effects of health stressors. Design Participants were from the Veterans Affairs Normative Aging Study (NAS) and included 249 young-old adults (age = 60–79 years, M=71.6) and 64 old-old adults (age = 80–89, M = 82.9) who completed questionnaires assessing stressors, physical health symptoms, and positive and negative affect on eight consecutive days. Results An independent samples t-test showed young-old and old-old adults did not significantly differ in their mean levels of daily co-occurrence of affect. The between-person relationships among stressors, health, and daily co-occurrence of affect revealed that neither stressors nor health were significantly related to daily co-occurrence of affect. However, results from a multilevel model revealed a three-way cross-level interaction (Health Stressor X Age Group X Co-Occurrence of Affect) where old-old adults with higher levels of co-occurrence of affect were less emotionally reactive to health stressors than young-old adults. Conclusion These findings provide support for the assertion that co-occurrence of affect functions in an adaptive capacity and highlight the importance of examining domain specific stressors. PMID:26518259

  16. The effects of daily co-occurrence of affect on older adults' reactivity to health stressors.

    PubMed

    Ramsey, Jennifer L; Neupert, Shevaun D; Mroczek, Daniel K; Spiro, Avron

    2016-01-01

    The present study examined age differences among older adults in the daily co-occurrence of affect and its potential role in buffering the negative effects of health stressors. Participants were from the Veterans Affairs Normative Aging Study and included 249 young-old adults (age = 60-79 years, M = 71.6) and 64 old-old adults (age = 80-89, M = 82.9) who completed questionnaires assessing stressors, physical health symptoms, and positive and negative affect for eight consecutive days. An independent samples t-test showed young-old and old-old adults did not significantly differ in their mean levels of daily co-occurrence of affect. The between-person relationships among stressors, health and daily co-occurrence of affect revealed that neither stressors nor health were significantly related to daily co-occurrence of affect. However, results from a multilevel model revealed a three-way cross-level interaction (health stressor × age group × co-occurrence of affect) where old-old adults with higher levels of co-occurrence of affect were less emotionally reactive to health stressors than young-old adults. These findings provide support for the assertion that co-occurrence of affect functions in an adaptive capacity and highlight the importance of examining domain-specific stressors.

  17. A hierarchical community occurrence model for North Carolina stream fish

    USGS Publications Warehouse

    Midway, S.R.; Wagner, Tyler; Tracy, B.H.

    2016-01-01

    The southeastern USA is home to one of the richest—and most imperiled and threatened—freshwater fish assemblages in North America. For many of these rare and threatened species, conservation efforts are often limited by a lack of data. Drawing on a unique and extensive data set spanning over 20 years, we modeled occurrence probabilities of 126 stream fish species sampled throughout North Carolina, many of which occur more broadly in the southeastern USA. Specifically, we developed species-specific occurrence probabilities from hierarchical Bayesian multispecies models that were based on common land use and land cover covariates. We also used index of biotic integrity tolerance classifications as a second level in the model hierarchy; we identify this level as informative for our work, but it is flexible for future model applications. Based on the partial-pooling property of the models, we were able to generate occurrence probabilities for many imperiled and data-poor species in addition to highlighting a considerable amount of occurrence heterogeneity that supports species-specific investigations whenever possible. Our results provide critical species-level information on many threatened and imperiled species as well as information that may assist with re-evaluation of existing management strategies, such as the use of surrogate species. Finally, we highlight the use of a relatively simple hierarchical model that can easily be generalized for similar situations in which conventional models fail to provide reliable estimates for data-poor groups.

  18. [Congenital talipes equinovarus--family occurrence].

    PubMed

    Kołecka, Ewa; Niedzielski, Kryspin Ryszard; Cukras, Zbigniew; Piotrowicz, Małgorzata

    2011-01-01

    Although congenital talipes equinovarus (CTEV) is one of the most frequently occurring congenital defects of locomotor organs, its ethiopathogenesis is still not fully known. Amongst the others, the inheritance patterns of that defect are not fully known, and that restricts genetic therapeutics and development of new treatment technologies. The aim of this study was analysis of family lineages of 205 children with CTEV (298 feet) treated at our centre in the years 1998-2008. The family occurrence of CTEV was found in 16 cases (8% of analysed group). 6 lineages, in which CTEV occurred in successive generations, were analysed in detail. Particularly interesting is the lineage of the family 1, in which the defect occurred in three successive generations. In case of that family, an autosomal dominant inheritance pattern is possible. Previously that pattern of CTEV inheritance was described only for isolated populations of Polynesians. In own material the family occurrence of CTEV was found to be less frequent than in bibliographic references. The defect occurred twice as often in boys, while the severe form was more frequently observed in girls, and that is consisted with data in the available bibliography. The analysis of presented lineages of families with CTEV did not allow unambiguous defining of the inheritance pattern for that defect. To confirm the autosomal dominant pattern of CTEV inheritance in the family in which the defect occurred in three successive generations, genetic tests would be necessary.

  19. Nitrification in Chloraminated Drinking Water Distribution Systems - Occurrence

    EPA Science Inventory

    This chapter discusses available information on nitrification occurrence in drinking water chloraminated distribution systems. Chapter 4 provides an introduction to causes and controls for nitrification in chloraminated drinking water systems. Both chapters are intended to serve ...

  20. Numerical and laboratory simulation of fault motion and earthquake occurrence

    NASA Technical Reports Server (NTRS)

    Cohen, S. C.

    1978-01-01

    Simple linear rheologies were used with elastic forces driving the main events and viscoelastic forces being important for aftershock and creep occurrence. Friction and its dependence on velocity, stress, and displacement also plays a key role in determining how, when, and where fault motion occurs. The discussion of the qualitative behavior of the simulators focuses on the manner in which energy was stored in the system and released by the unstable and stable sliding processes. The numerical results emphasize the statistics of earthquake occurrence and the correlations among source parameters.

  1. The co-occurrence of aggression and self-harm: systematic literature review.

    PubMed

    O'Donnell, Orla; House, Allan; Waterman, Mitch

    2015-04-01

    Epidemiological research supports an association between aggression and self-harm through data on the frequency with which individuals exhibit both behaviours. Unbiased evidence, however, is needed to draw conclusions about the nature and extent of co-occurrence. Systematic review of published studies was undertaken to evaluate whether or not the frequency with which aggression and self-harm co-occur is beyond that which would be expected by chance. Outcome measures included: (a) between-group differences on a standardised aggression/self-harm measure - the groups defined by scores on a measure of the other behaviour; (b) correlations between the two behaviours; (c) co-occurrence rates in populations defined by the presence of either behaviour; (d) co-occurrence rates in populations not defined by either behaviour. Odds ratios were calculated for studies presenting complete frequency data. 123 studies, some yielding more than one type of result, met the inclusion criteria. Most case-control studies found elevated levels of aggression in self-harming populations (or self-harm in aggressive populations) compared to controls. The majority of correlational, co-occurrence rate, and odds ratio data found aggression and self-harm to be associated. Results were subject to descriptive synthesis only and thus, unable to report an overall effect size. Evidence suggests that aggression and self-harm frequently co-occur. Such evidence necessitates more theoretical discussion and associated research on the source and nature of co-occurrence. Nonetheless, individuals who present with one behaviour may be considered an 'at-risk' group in terms of exhibiting the other. Such evidence holds implications for practice (e.g. risk assessment). Copyright © 2015. Published by Elsevier B.V.

  2. Mass synchronization: Occurrence and its control with possible applications to brain dynamics

    NASA Astrophysics Data System (ADS)

    Chandrasekar, V. K.; Sheeba, Jane H.; Lakshmanan, M.

    2010-12-01

    Occurrence of strong or mass synchronization of a large number of neuronal populations in the brain characterizes its pathological states. In order to establish an understanding of the mechanism underlying such pathological synchronization, we present a model of coupled populations of phase oscillators representing the interacting neuronal populations. Through numerical analysis, we discuss the occurrence of mass synchronization in the model, where a source population which gets strongly synchronized drives the target populations onto mass synchronization. We hypothesize and identify a possible cause for the occurrence of such a synchronization, which is so far unknown: Pathological synchronization is caused not just because of the increase in the strength of coupling between the populations but also because of the strength of the strong synchronization of the drive population. We propose a demand controlled method to control this pathological synchronization by providing a delayed feedback where the strength and frequency of the synchronization determine the strength and the time delay of the feedback. We provide an analytical explanation for the occurrence of pathological synchronization and its control in the thermodynamic limit.

  3. Modeling spatially-varying landscape change points in species occurrence thresholds

    USGS Publications Warehouse

    Wagner, Tyler; Midway, Stephen R.

    2014-01-01

    Predicting species distributions at scales of regions to continents is often necessary, as large-scale phenomena influence the distributions of spatially structured populations. Land use and land cover are important large-scale drivers of species distributions, and landscapes are known to create species occurrence thresholds, where small changes in a landscape characteristic results in abrupt changes in occurrence. The value of the landscape characteristic at which this change occurs is referred to as a change point. We present a hierarchical Bayesian threshold model (HBTM) that allows for estimating spatially varying parameters, including change points. Our model also allows for modeling estimated parameters in an effort to understand large-scale drivers of variability in land use and land cover on species occurrence thresholds. We use range-wide detection/nondetection data for the eastern brook trout (Salvelinus fontinalis), a stream-dwelling salmonid, to illustrate our HBTM for estimating and modeling spatially varying threshold parameters in species occurrence. We parameterized the model for investigating thresholds in landscape predictor variables that are measured as proportions, and which are therefore restricted to values between 0 and 1. Our HBTM estimated spatially varying thresholds in brook trout occurrence for both the proportion agricultural and urban land uses. There was relatively little spatial variation in change point estimates, although there was spatial variability in the overall shape of the threshold response and associated uncertainty. In addition, regional mean stream water temperature was correlated to the change point parameters for the proportion of urban land use, with the change point value increasing with increasing mean stream water temperature. We present a framework for quantify macrosystem variability in spatially varying threshold model parameters in relation to important large-scale drivers such as land use and land cover

  4. Cerebellar output controls generalized spike‐and‐wave discharge occurrence

    PubMed Central

    Kros, Lieke; Eelkman Rooda, Oscar H. J.; Spanke, Jochen K.; Alva, Parimala; van Dongen, Marijn N.; Karapatis, Athanasios; Tolner, Else A.; Strydis, Christos; Davey, Neil; Winkelman, Beerend H. J.; Negrello, Mario; Serdijn, Wouter A.; Steuber, Volker; van den Maagdenberg, Arn M. J. M.; De Zeeuw, Chris I.

    2015-01-01

    Objective Disrupting thalamocortical activity patterns has proven to be a promising approach to stop generalized spike‐and‐wave discharges (GSWDs) characteristic of absence seizures. Here, we investigated to what extent modulation of neuronal firing in cerebellar nuclei (CN), which are anatomically in an advantageous position to disrupt cortical oscillations through their innervation of a wide variety of thalamic nuclei, is effective in controlling absence seizures. Methods Two unrelated mouse models of generalized absence seizures were used: the natural mutant tottering, which is characterized by a missense mutation in Cacna1a, and inbred C3H/HeOuJ. While simultaneously recording single CN neuron activity and electrocorticogram in awake animals, we investigated to what extent pharmacologically increased or decreased CN neuron activity could modulate GSWD occurrence as well as short‐lasting, on‐demand CN stimulation could disrupt epileptic seizures. Results We found that a subset of CN neurons show phase‐locked oscillatory firing during GSWDs and that manipulating this activity modulates GSWD occurrence. Inhibiting CN neuron action potential firing by local application of the γ‐aminobutyric acid type A (GABA‐A) agonist muscimol increased GSWD occurrence up to 37‐fold, whereas increasing the frequency and regularity of CN neuron firing with the use of GABA‐A antagonist gabazine decimated its occurrence. A single short‐lasting (30–300 milliseconds) optogenetic stimulation of CN neuron activity abruptly stopped GSWDs, even when applied unilaterally. Using a closed‐loop system, GSWDs were detected and stopped within 500 milliseconds. Interpretation CN neurons are potent modulators of pathological oscillations in thalamocortical network activity during absence seizures, and their potential therapeutic benefit for controlling other types of generalized epilepsies should be evaluated. Ann Neurol 2015;77:1027–1049 PMID:25762286

  5. Longitudinal Variations in the Variability of Spread F Occurrence

    NASA Astrophysics Data System (ADS)

    Groves, K. M.; Bridgwood, C.; Carrano, C. S.

    2017-12-01

    The complex dynamics of the equatorial ionosphere have attracted the interest and attention of researchers for many decades. The relatively local processes that give rise to large meridional gradients have been well documented and the associated terminology has entered the common lexicon of ionospheric research (e.g., fountain effect, equatorial anomaly, bubbles, Spread F). Zonal variations have also been noted, principally at the level of determining longitudinal differences in seasonal activity patterns. Due to a historical lack of high resolution ground-based observations at low latitudes, the primary source of data for such analyses has been space-based observations from satellites such as ROCSAT, DMSP, C/NOFS that measure in situ electron density variations. An important longitudinal variation in electron density structure associated with non-migrating diurnal tides was discovered by Immel et al. in 2006 using data from the FUV sensor aboard the NASA IMAGE satellite. These satellite observations have been very helpful in identifying the structural characteristics of the equatorial ionosphere and the occurrence of Spread F, but they provide little insight into variations in scintillation features and potential differences in bubble development characteristics. Moreover space-based studies tend towards the statistics of occurrence frequency over periods of weeks to months. A recent analysis of daily spread F occurrence as determined by low latitude VHF scintillation activity shows that statistical results that are consistent with previous space-based observations, but the level of variability in the occurrence data show marked variations with longitude. For example, the American sector shows very low in-season variability while the African and Asian sectors exhibit true day-to-day variability regardless of seasonal variations. The results have significant implications for space weather as they suggest that long-term forecasts of equatorial scintillation may be

  6. Chapter 30: Marbled Murrelet Populations of Washington — Marine Habitat Preferences and Variability of Occurrence

    Treesearch

    Steven M. Speich; Terrence R. Wahl

    1995-01-01

    Marbled Murrelets occur in Puget Sound marine habitats in relatively low numbers. The rates of occurrence of murrelets on censuses within marine habitats is generally low. Further analysis is required to determine if low occurrence rates are a general function of the movement of birds, or their consistent occurrence on particular censuses and not on others. Qualitative...

  7. Novel Occurrence of Uncommon Polyamines in Higher Plants 1

    PubMed Central

    Kuehn, Glenn D.; Rodriguez-Garay, Benjamin; Bagga, Suman; Phillips, Gregory C.

    1990-01-01

    Diamines and polyamines are ubiquitous components of living cells, and apparently are involved in numerous cellular and physiological processes. Certain “uncommon” polyamines have limited distribution in nature and have been associated primarily with organisms adapted to extreme environments, although the precise function of these polyamines in such organisms is unknown. This article summarizes current knowledge regarding the occurrence in higher plants of the uncommon polyamines related to and including norspermidine and norspermine. A putative biosynthetic pathway to account for the occurrences of these uncommon polyamines in higher plants is presented, with a summary of the supporting evidence indicating the existence of the requisite enzymatic activities in alfalfa, Medicago sativa L. PMID:16667862

  8. A Rare Occurrence of Geminated-Taloned Maxillary Lateral Incisor

    PubMed Central

    Kayal, Vizhi G

    2012-01-01

    ABSTRACT The talon cusp is a developmental anomaly characterized by the presence of an accessory cusp like structure projecting from the cingulum area of the anterior teeth. Gemination is an anomaly caused by a single tooth germ that attempted to divide during its development. These developmental anomalies may cause clinical problems including esthetic impairment, pain, caries and tooth crowding. Co-occurrence of two anomalies in a teeth is rare. This paper presents an unusual case of talon cusp on geminated permanent lateral incisor. How to cite this article: Neeraja R, Kayal VG. A Rare Occurrence of Geminated-Taloned Maxillary Lateral Incisor. Int J Clin Pediatr Dent 2012;5(2):136-138. PMID:25206153

  9. Towards a new paleotemperature proxy from reef coral occurrences.

    PubMed

    Lauchstedt, Andreas; Pandolfi, John M; Kiessling, Wolfgang

    2017-09-05

    Global mean temperature is thought to have exceeded that of today during the last interglacial episode (LIG, ~ 125,000 yrs b.p.) but robust paleoclimate data are still rare in low latitudes. Occurrence data of tropical reef corals may provide new proxies of low latitude sea-surface temperatures. Using modern reef coral distributions we developed a geographically explicit model of sea surface temperatures. Applying this model to coral occurrence data of the LIG provides a latitudinal U-shaped pattern of temperature anomalies with cooler than modern temperatures around the equator and warmer subtropical climes. Our results agree with previously published estimates of LIG temperatures and suggest a poleward broadening of the habitable zone for reef corals during the LIG.

  10. Difference in occurrence of heterotopic ossification according to prosthesis type in the cervical artificial disc replacement.

    PubMed

    Yi, Seong; Kim, Keung Nyun; Yang, Moon Sul; Yang, Joong Won; Kim, Hoon; Ha, Yoon; Yoon, Do Heum; Shin, Hyun Chul

    2010-07-15

    Retrospective study of the difference of heterotopic ossification (HO) occurrence according to 3 different types of prosthesis. This study was designed to investigate the difference of HO occurrence according to different type of prosthesis. HO is defined as formation of the bone outside the skeletal system. Reported HO occurrence rate in cervical artificial disc replacement (ADR) was unexpectedly high and varied. But the influencing factors of HO in cervical ADR have not been elucidated well. The prosthesis-related factors for making difference of HO occurrence were investigated in this study. A total of 170 patients undergoing cervical arthroplasty with the Bryan cervical disc prosthesis (Medtroic Sofamor Danek, Memphis, TN), Mobi-C disc prosthesis (LDR Medical, Troyes, France), and ProDisc-C (Synthes, Inc., West Chester, PA) were included. Cervical lateral radiographs obtained before and after surgery were used to identify HO. Occurrence rate, occurrence-free period, location, and grade of HOs were investigated according to the different prosthesis. Each prosthesis group included patients as follows: Bryan disc, 81 patients; Mobi-C, 61 patients; and ProDisc-C, 28 patients. Overall HO rate was 40.6% (69 of 170 patients). Each HO occurrence rate by prosthesis was as follows: the Bryan disc group, 21.0%; Mobi-C group, 52.5%; and the ProDisc-C group, 71.4%. In the survival analysis, all patients showed 27.1 +/- 3.7 months as the median survival. The Bryan disc group showed statistically longer survival (48.4 +/- 7.4 months) than the other groups. Occurrence of HO is an inevitable postoperative complication after cervical ADR. The occurrence rate of HO was higher than our expectation. Moreover, definite differences in occurrence rate according to the prosthesis type were identified by this study.

  11. The North Sea goes viral: Occurrence and distribution of North Sea bacteriophages.

    PubMed

    Garin-Fernandez, Alexa; Pereira-Flores, Emiliano; Glöckner, Frank Oliver; Wichels, Antje

    2018-06-01

    Marine viruses are dominated by phages and have an enormous influence on microbial population dynamics, due to lysis and horizontal gene transfer. The aim of this study is to analyze the occurrence and diversity of phages in the North Sea, considering the virus-host interactions and biogeographic factors. The virus community of four sampling stations were described using virus metagenomics (viromes). The results show that the virus community was not evenly distributed throughout the North Sea. The dominant phage members were identified as unclassified phage group, followed by Caudovirales order. Myoviridae was the dominant phage family in the North Sea, which occurrence decreased from the coast to the open sea. In contrast, the occurrence of Podoviridae increased and the occurrence of Siphoviridae was low throughout the North Sea. The occurrence of other groups such as Phycodnaviridae decreased from the coast to the open sea. The coastal virus community was genetically more diverse than the open sea community. The influence of riverine inflow and currents, for instance the English Channel flow affects the genetic virus diversity with the community carrying genes from a variety of metabolic pathways and other functions. The present study offers the first insights in the virus community in the North Sea using viromes and shows the variation in virus diversity and the genetic information moved from coastal to open sea areas. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

  12. Improving the Accuracy of Planet Occurrence Rates from Kepler Using Approximate Bayesian Computation

    NASA Astrophysics Data System (ADS)

    Hsu, Danley C.; Ford, Eric B.; Ragozzine, Darin; Morehead, Robert C.

    2018-05-01

    We present a new framework to characterize the occurrence rates of planet candidates identified by Kepler based on hierarchical Bayesian modeling, approximate Bayesian computing (ABC), and sequential importance sampling. For this study, we adopt a simple 2D grid in planet radius and orbital period as our model and apply our algorithm to estimate occurrence rates for Q1–Q16 planet candidates orbiting solar-type stars. We arrive at significantly increased planet occurrence rates for small planet candidates (R p < 1.25 R ⊕) at larger orbital periods (P > 80 day) compared to the rates estimated by the more common inverse detection efficiency method (IDEM). Our improved methodology estimates that the occurrence rate density of small planet candidates in the habitable zone of solar-type stars is {1.6}-0.5+1.2 per factor of 2 in planet radius and orbital period. Additionally, we observe a local minimum in the occurrence rate for strong planet candidates marginalized over orbital period between 1.5 and 2 R ⊕ that is consistent with previous studies. For future improvements, the forward modeling approach of ABC is ideally suited to incorporating multiple populations, such as planets, astrophysical false positives, and pipeline false alarms, to provide accurate planet occurrence rates and uncertainties. Furthermore, ABC provides a practical statistical framework for answering complex questions (e.g., frequency of different planetary architectures) and providing sound uncertainties, even in the face of complex selection effects, observational biases, and follow-up strategies. In summary, ABC offers a powerful tool for accurately characterizing a wide variety of astrophysical populations.

  13. Habitat stability and occurrences of malaria vector larvae in western Kenya highlands.

    PubMed

    Himeidan, Yousif E; Zhou, Guofa; Yakob, Laith; Afrane, Yaw; Munga, Stephen; Atieli, Harrysone; El-Rayah, El-Amin; Githeko, Andrew K; Yan, Guiyun

    2009-10-21

    Although the occurrence of malaria vector larvae in the valleys of western Kenya highlands is well documented, knowledge of larval habitats in the uphill sites is lacking. Given that most inhabitants of the highlands actually dwell in the uphill regions, it is important to develop understanding of mosquito breeding habitat stability in these sites in order to determine their potential for larval control. A total of 128 potential larval habitats were identified in hilltops and along the seasonal streams in the Sigalagala area of Kakamega district, western Kenya. Water availability in the habitats was followed up daily from August 3, 2006 to February 23, 2007. A habitat is defined as stable when it remains aquatic continuously for at least 12 d. Mosquito larvae were observed weekly. Frequencies of aquatic, stable and larvae positive habitats were compared between the hilltop and seasonal stream area using chi2-test. Factors affecting the presence/absence of Anopheles gambiae larvae in the highlands were determined using multiple logistic regression analysis. Topography significantly affected habitat availability and stability. The occurrence of aquatic habitats in the hilltop was more sporadic than in the stream area. The percentage of habitat occurrences that were classified as stable during the rainy season is 48.76% and 80.79% respectively for the hilltop and stream area. Corresponding frequencies of larvae positive habitats were 0% in the hilltop and 5.91% in the stream area. After the rainy season, only 23.42% of habitat occurrences were stable and 0.01% larvae positive habitats were found in the hilltops, whereas 89.75% of occurrences remained stable in the stream area resulting in a frequency of 12.21% larvae positive habitats. The logistic regression analysis confirmed the association between habitat stability and larval occurrence and indicated that habitat surface area was negatively affecting the occurrence of An. gambiae larvae. While An. gambiae and An

  14. Strong Sporadic E Occurrence Detected by Ground-Based GNSS

    NASA Astrophysics Data System (ADS)

    Sun, Wenjie; Ning, Baiqi; Yue, Xinan; Li, Guozhu; Hu, Lianhuan; Chang, Shoumin; Lan, Jiaping; Zhu, Zhengping; Zhao, Biqiang; Lin, Jian

    2018-04-01

    The ionospheric sporadic E (Es) layer has significant impact on radio wave propagation. The traditional techniques employed for Es layer observation, for example, ionosondes, are not dense enough to resolve the morphology and dynamics of Es layer in spatial distribution. The ground-based Global Navigation Satellite Systems (GNSS) technique is expected to shed light on the understanding of regional strong Es occurrence, owing to the facts that the critical frequency (foEs) of strong Es structure is usually high enough to cause pulse-like disturbances in GNSS total electron content (TEC), and a large number of GNSS receivers have been deployed all over the world. Based on the Chinese ground-based GNSS networks, including the Crustal Movement Observation Network of China and the Beidou Ionospheric Observation Network, a large-scale strong Es event was observed in the middle latitude of China. The strong Es shown as a band-like structure in the southwest-northeast direction extended more than 1,000 km. By making a comparative analysis of Es occurrences identified from the simultaneous observations by ionosondes and GNSS TEC receivers over China middle latitude statistically, we found that GNSS TEC can be well employed to observe strong Es occurrence with a threshold value of foEs, 14 MHz.

  15. [Vulvovaginitis. Occurrence and importance of mixed and unclassifiable pictures].

    PubMed

    Líbalová, Z; Cepický, P; Malina, J; Stanslický, K; Kuzelová, M; Medalová, Z; Sosnová, K

    2007-01-01

    To evaluate the occurrence of mixed and unclassifiable vulvovaginitis (i.e. those, which fulfill the diagnostic criteria of several diagnostic units or no diagnostic unit) in symptomatic and asymptomatic women. Prospective study. In 412 women (115 of them asymptomatic) the authors established the diagnosis of vulvovaginitis on the basis of gynecological examination, pH, the amine test and microscopic examination according to Giemsa and Gram. Mycosis was diagnosed in 15.5% women (in 9,6% of asymptomatic ones), lactobacillosis in u 5.6% (in 7.0% of asymptomatic), anaerobic vaginosis in 10.7% (8.7% of asymptomatic), aerobic vaginitis in 7.7% women (4.3% of asymptomatic). U 15.0% mixed infections were diagnosed (in 61% asymptomatic). U 29.4% symptomatic women the diagnostic criteria were not fulfilled for any nosological unit. Vulvovaginal mycosis, lactobacillosis, anaerobic vaginosis, aerobic vaginosis were considered as dysmicrobia conditions. The authors demonstrated a high occurrence of more units ("clear" diagnoses to "mixed" diagnoses being in the ratio of 1.62:1). The authors also demonstrated a high occurrence of mixed infections in asymptomatic women (36.0%). On the contrary, in 29.4% of symptomatic women the diagnosis could not be established, the findings being "normal" or "unclassifiable".

  16. FISH SPECIES OCCURRENCE DENSITIES IN NORTHEASTERN LAKES AND THE EXTENT OF NON-NATIVES

    EPA Science Inventory

    A species' occurrence density is the proportion or number of habitat units (lakes in this case) in a region in which it is present. Reliable estimates of occurrence density should be useful to discussions and decisions about biodiversity, rare species, and non-native invasions. T...

  17. Formulating accident occurrence as a survival process.

    PubMed

    Chang, H L; Jovanis, P P

    1990-10-01

    A conceptual framework for accident occurrence is developed based on the principle of the driver as an information processor. The framework underlies the development of a modeling approach that is consistent with the definition of exposure to risk as a repeated trial. Survival theory is proposed as a statistical technique that is consistent with the conceptual structure and allows the exploration of a wide range of factors that contribute to highway operating risk. This survival model of accident occurrence is developed at a disaggregate level, allowing safety researchers to broaden the scope of studies which may be limited by the use of traditional aggregate approaches. An application of the approach to motor carrier safety is discussed as are potential applications to a variety of transportation industries. Lastly, a typology of highway safety research methodologies is developed to compare the properties of four safety methodologies: laboratory experiments, on-the-road studies, multidisciplinary accident investigations, and correlational studies. The survival theory formulation has a mathematical structure that is compatible with each safety methodology, so it may facilitate the integration of findings across methodologies.

  18. Statistical study of ULF wave occurrence in the dayside magnetosphere

    NASA Technical Reports Server (NTRS)

    Cao, M.; Mcpherron, R. L.; Russell, C. T.

    1994-01-01

    Ultralow-frequency (ULF) waves are observed almost everywhere in the dayside magnetosphere. The mechanism by which these waves are generated and transformed in the dayside magnetosphere is still not understood. Here we report a statistical study of these waves based on magnetic field data from the International Sun-Earth Explorer 1 (ISEE 1) spacecraft. Data from the first traversal of the spacecraft through the entire dayside magnetosphere have been examined to determine the spatial distribution of wave occurrence. Successive 20-min segments of data were transformed to a field-aligned coordinate system. The parallel component was detrended and all three components of the field spectrally analyzed. Wave occurrence was defined by the presence of significant peaks in the power spectra. Wave events were categorized by three wave frequency bands: Pc 3 with T approximately 10-45 s; Pc 4 with T approximately 45-150 s; the short-period part of the Pc 5 wave band with T approximately 150-324 s. Properties of the spectral peaks were then entered into a data base. The data base was next sorted to determine the spatial occurrence pattern for the waves. Our results show that Pc 3 waves most frequently occur just outside synchronous orbit and are approximately centered on local noon. Pc 4 waves have a similar distribution with its peak further out. Pc 5 waves have high occurrence rate at the two flanks of the magnetosphere. Peaks in spectra obtained near the magnetopause are less clearly defined than those deeper in the magnetosphere.

  19. Giant Planet Occurrence Rate as a Function of Stellar Mass

    NASA Astrophysics Data System (ADS)

    Reffert, Sabine; Bergmann, Christoph; Quirrenbach, Andreas; Trifonov, Trifon; Künstler, Andreas

    2013-07-01

    For over 12 years we have carried out a Doppler survey at Lick Observatory, identifying 15 planets and 20 candidate planets in a sample of 373 G and K giant stars. We investigate giant planet occurrence rate as a function of stellar mass and metallicity in this sample, which covers the mass range from about 1 to 3.5-5.0 solar masses. We confirm the presence of a strong planet-metallicity correlation in our giant star sample, which is fully consistent with the well-known planet-metallicity correlation for main-sequence stars. Furthermore, we find a very strong dependence of the giant planet occurrence rate on stellar mass, which we fit with a gaussian distribution. Stars with masses of about 1.9 solar masses have the highest probability of hosting a giant planet, whereas the planet occurrence rate drops rapidly for masses larger than 2.5 to 3.0 solar masses. We do not find any planets around stars more massive than 2.7 solar masses, although we have 113 stars with masses between 2.7 and 5.0 solar masses in our sample (planet occurrence rate in that mass range: 0% +1.6% at 68.3% confidence). This result is not due to a bias related to planet detectability as a function of stellar mass. We conclude that larger mass stars do not form giant planets which are observable at orbital distances of a few AU today. Possible reasons include slower growth rate due to the snow-line being located further out, longer migration timescale and faster disk depletion.

  20. [Prediction model of human-caused fire occurrence in the boreal forest of northern China].

    PubMed

    Guo, Fu-tao; Su, Zhang-wen; Wang, Guang-yu; Wang, Qiang; Sun, Long; Yang, Ting-ting

    2015-07-01

    The Chinese boreal forest is an important forest resource in China. However, it has been suffering serious disturbances of forest fires, which were caused equally by natural disasters (e.g., lightning) and human activities. The literature on human-caused fires indicates that climate, topography, vegetation, and human infrastructure are significant factors that impact the occurrence and spread of human-caused fires. But the studies on human-caused fires in the boreal forest of northern China are limited and less comprehensive. This paper applied the spatial analysis tools in ArcGIS 10.0 and Logistic regression model to investigate the driving factors of human-caused fires. Our data included the geographic coordinates of human-caused fires, climate factors during year 1974-2009, topographic information, and forest map. The results indicated that distance to railway (x1) and average relative humidity (x2) significantly impacted the occurrence of human-caused fire in the study area. The logistic model for predicting the fire occurrence probability was formulated as P= 1/[11+e-(3.026-0.00011x1-0.047x2)] with an accuracy rate of 80%. The above model was used to predict the monthly fire occurrence during the fire season of 2015 based on the HADCM2 future weather data. The prediction results showed that the high risk of human-caused fire occurrence concentrated in the months of April, May, June and August, while April and May had higher risk of fire occurrence than other months. According to the spatial distribution of possibility of fire occurrence, the high fire risk zones were mainly in the west and southwest of Tahe, where the major railways were located.

  1. The location and rate of occurrence of near-Earth magnetotail reconnection as observed by Cluster and Geotail

    NASA Astrophysics Data System (ADS)

    Genestreti, K. J.; Fuselier, S. A.; Goldstein, J.; Nagai, T.; Eastwood, J. P.

    2014-12-01

    A statistical characterization of the location and rate of occurrence of magnetic reconnection in the near-Earth magnetotail is performed by analyzing the set of ion diffusion region (DR) observations made by the Cluster and Geotail spacecraft during solar maximum and the declining phase. The occurrence rate is analyzed in terms of its dependence on both XGSM* and YGSM* (where coordinates are in the solar wind aberrated geocentric solar magnetospheric system). Within the limits of the statistics available to this study, we find the purely XGSM* -dependent occurrence rate to be roughly constant over a large portion of the near-Earth magnetotail. In contrast, we find the purely YGSM* -dependent occurrence rate to be biased towards dusk with a local maximum between 0RE ≤YGSM* ≤ 5RE. The YGSM* -dependent occurrence rate is then used to construct a quasi-2D formulation of the DR occurrence rate, which has explicit dependence on XGSM* and implicit dependence on YGSM*. The quasi-2D occurrence rate is then used to examine the predicted ephemeris of the Magnetospheric MultiScale (MMS) spacecraft. We estimate that, during its near-Earth magnetotail survey phase, MMS will likely observe 11±4 DR events. • The occurrence rate of events is calculated as a function of XGSM and YGSM. • The occurrence rate is used to estimate the number of events MMS will observe.

  2. Detection, Occurrence and Fate of Emerging Contaminants in Agricultural Environments

    PubMed Central

    Cassada, David A.; Bartelt–Hunt, Shannon L.; Li, Xu; D’Alessio, Matteo; Zhang, Yun; Zhang, Yuping; Sallach, J. Brett

    2018-01-01

    A total of 59 papers published in 2015 were reviewed ranging from detailed descriptions of analytical methods, to fate and occurrence studies, to ecological effects and sampling techniques for a wide variety of emerging contaminants likely to occur in agricultural environments. New methods and studies on veterinary pharmaceuticals, steroids, antibiotic resistance genes in agricultural environments continue to expand our knowledge base on the occurrence and potential impacts of these compounds. This review is divided into the following sections: Introduction, Analytical Methods, Steroid Hormones, Pharmaceutical Contaminants, Transformation Products, and “Antibiotic Resistance, Drugs, Bugs and Genes”. PMID:27620078

  3. Driving factors for torrential mass-movements occurrence in the Western Alps

    NASA Astrophysics Data System (ADS)

    Tiranti, Davide; Cremonini, Roberto; Asprea, Irene; Marco, Federica

    2016-02-01

    To understand the behaviour of torrential processes in the alpine environment, the conditions mainly responsiblefor the occurrence of these phenomena have to be identified and distinguished(classified) aspredisposing and triggering factors. In this regard, this study is aimed to understanding which factors lead to the occurrence of a given torrential processes in alpine catchments in the Western Alps, where information on past events are exhaustive and characterized by a long historical series. More than 769 documented torrential eventsoccurred from 1728 to 2015 within 78 catchments. Datasets concerning climate, geology and morphology, land use and the presence of historical landslide activity have been elaborated as input for multivariate statistical analysis to characterize the behaviour of the catchments. The results pinpoint the factors that mainly drive the type of torrential dominant process occurring in a given catchment, its occurrence probability, and its frequency. This study has demonstrated that catchments characterized by a significant percentage of outcropping rocks show a greater occurrence of torrential processes, especially hyperconcentrated flows and debris flows; on the contrary highly vegetated catchments are typically subject to water flows. This result can be a useful tool for the evaluation of hazards related to this specific phenomenon, making it possible to predict the most likely torrential processes that can be generated in a specific basin, given the characteristics of outcropping rock and vegetation cover.

  4. Otitis Media: Occurrence and Effect on Child Development.

    ERIC Educational Resources Information Center

    Jessen, B. A.; Beattie, R. G.

    1990-01-01

    This article reviews literature and research on otitis media, focusing on definitions; occurrence, including such influences as age, socioeconomic status, genetics, child care situation, feeding techniques, and sex; fluctuating hearing loss; psychological, linguistic, and cognitive development; and developmental deficits in speech, language,…

  5. The occurrence and wave properties of EMIC waves observed by the Magnetospheric Multiscale (MMS) mission

    NASA Astrophysics Data System (ADS)

    Wang, X. Y.; Huang, S. Y.; Allen, R. C.; Fu, H. S.; Deng, X. H.; Zhou, M.; Burch, J. L.; Torbert, R. B.

    2017-08-01

    Electromagnetic ion cyclotron (EMIC) waves can precipitate the ring current ions and relativistic electrons and heat the cold electrons in the magnetosphere. This requires comprehensive knowledge of the occurrence and wave properties of EMIC waves. In the present study, we used the data from one new mission, the Magnetospheric Multiscale (MMS) mission launched in March 2015, to investigate the occurrence and wave properties of H+-band and He+-band EMIC waves in the magnetosphere. Our statistical results show the following: (1) H+-band EMIC waves mostly occur in the higher L-shells (L > 5) while He+-band EMIC waves are mostly observed in the lower L-shells (L < 6). (2) The occurrence rate of H+-band EMIC waves in the dayside is higher than that in the nightside. The highest peak of occurrence rate of H+-band EMIC waves is in the postnoon sector (5-8 L-shells), and the secondary peak lies in the small area of the dawn sector. (3) The wave power spectral density peaks in the postnoon and predusk sectors, while the wave normal angles are largest in the dawn sector. (4) Linear and right-hand polarized H+-band EMIC waves are mainly in the regions of peak occurrence, while linear polarized waves are seen to also dominate outside of the regions of peak occurrence. The highest occurrence rate of linear polarized He+-band EMIC waves is observed in the dawn sector. We discussed the results and compared with previous findings.

  6. Increased variability of tornado occurrence in the United States.

    PubMed

    Brooks, Harold E; Carbin, Gregory W; Marsh, Patrick T

    2014-10-17

    Whether or not climate change has had an impact on the occurrence of tornadoes in the United States has become a question of high public and scientific interest, but changes in how tornadoes are reported have made it difficult to answer it convincingly. We show that, excluding the weakest tornadoes, the mean annual number of tornadoes has remained relatively constant, but their variability of occurrence has increased since the 1970s. This is due to a decrease in the number of days per year with tornadoes combined with an increase in days with many tornadoes, leading to greater variability on annual and monthly time scales and changes in the timing of the start of the tornado season. Copyright © 2014, American Association for the Advancement of Science.

  7. Occurrence of cohesion of metals during combined plastic deformation

    NASA Technical Reports Server (NTRS)

    Aynbinder, S. G.; Klokova, E. F.

    1980-01-01

    Experiments were conducted to study the cohesion of metals with surface films of varying thickness and hardness. It was established that the deformation necessary for the occurrence of cohesion is determined by the correlation of mechanical properties of the films and the base metal. The greater the relative hardness of the film the lower the deformation necessary for the occurrence of cohesion. The films are as plastic as the base metal prevent cohesion, since in this case it is impossible for sections of metal to appear that are free of contaminants. The physical perculiarities of metals that determine their capability for coalescence under conditions of dry friction are the relative hardness and plasticity of the oxide films formed on their surface under atmospheric conditions.

  8. On the occurrence of nuclei in mature sieve elements.

    PubMed

    Event, R F; Davis, J D; Tucker, C M; Alfieri, F J

    1970-12-01

    The secondary phloem of 3 species of the Taxodiaceae and 13 species of woody dicotyledons was examined for the occurrence of nuclei in mature sieve elements. Nuclei were found in all mature sieve cells of Metasequoia glyptostroboides, Sequoia sempervirens and Taxodium distichum, and in some mature sieve-tube members in 12 of the 13 species of woody dicotyledons. Except for nuclei of sieve cells undergoing cessation of function, the nuclei in mature sieve cells of M. glyptostroboides, S. sempervirens and T. distichum were normal in appearance. The occurrence and morphology of nuclei in mature sieve-tube members of the woody dicotyledons were quite variable. Only 3 species, Robinia pseudoacacia, Ulmus americana and Vitis riparia, contained some mature sieve elements with apparently normal nuclei.

  9. Spatial correlation of hydrometeor occurrence, reflectivity, and rain rate from CloudSat

    NASA Astrophysics Data System (ADS)

    Marchand, Roger

    2012-03-01

    This paper examines the along-track vertical and horizontal structure of hydrometeor occurrence, reflectivity, and column rain rate derived from CloudSat. The analysis assumes hydrometeors statistics in a given region are horizontally invariant, with the probability of hydrometeor co-occurrence obtained simply by determining the relative frequency at which hydrometeors can be found at two points (which may be at different altitudes and offset by a horizontal distance, Δx). A correlation function is introduced (gamma correlation) that normalizes hydrometeor co-occurrence values to the range of 1 to -1, with a value of 0 meaning uncorrelated in the usual sense. This correlation function is a generalization of the alpha overlap parameter that has been used in recent studies to describe the overlap between cloud (or hydrometeor) layers. Examples of joint histograms of reflectivity at two points are also examined. The analysis shows that the traditional linear (or Pearson) correlation coefficient provides a useful one-to-one measure of the strength of the relationship between hydrometeor reflectivity at two points in the horizontal (that is, two points at the same altitude). While also potentially useful in the vertical direction, the relationship between reflectivity values at different altitudes is not as well described by the linear correlation coefficient. The decrease in correlation of hydrometeor occurrence and reflectivity with horizontal distance, as well as precipitation occurrence and column rain rate, can be reasonably well fit with a simple two-parameter exponential model. In this paper, the North Pacific and tropical western Pacific are examined in detail, as is the zonal dependence.

  10. Co-occurrence correlations of heavy metals in sediments revealed using network analysis.

    PubMed

    Liu, Lili; Wang, Zhiping; Ju, Feng; Zhang, Tong

    2015-01-01

    In this study, the correlation-based study was used to identify the co-occurrence correlations among metals in marine sediment of Hong Kong, based on the long-term (from 1991 to 2011) temporal and spatial monitoring data. 14 stations out of the total 45 marine sediment monitoring stations were selected from three representative areas, including Deep Bay, Victoria Harbour and Mirs Bay. Firstly, Spearman's rank correlation-based network analysis was conducted as the first step to identify the co-occurrence correlations of metals from raw metadata, and then for further analysis using the normalized metadata. The correlations patterns obtained by network were consistent with those obtained by the other statistic normalization methods, including annual ratios, R-squared coefficient and Pearson correlation coefficient. Both Deep Bay and Victoria Harbour have been polluted by heavy metals, especially for Pb and Cu, which showed strong co-occurrence with other heavy metals (e.g. Cr, Ni, Zn and etc.) and little correlations with the reference parameters (Fe or Al). For Mirs Bay, which has better marine sediment quality compared with Deep Bay and Victoria Harbour, the co-occurrence patterns revealed by network analysis indicated that the metals in sediment dominantly followed the natural geography process. Besides the wide applications in biology, sociology and informatics, it is the first time to apply network analysis in the researches of environment pollutions. This study demonstrated its powerful application for revealing the co-occurrence correlations among heavy metals in marine sediments, which could be further applied for other pollutants in various environment systems. Copyright © 2014 Elsevier Ltd. All rights reserved.

  11. Natural occurrence of alternariol and alternariol monomethyl ether in soya beans.

    PubMed

    Oviedo, M S; Barros, G G; Chulze, S N; Ramirez, M L

    2012-08-01

    The natural occurrence of alternariol (AOH) and alternariol monomethyl ether (AME) in soya beans harvested in Argentina was evaluated. Both toxins were simultaneously detected by using HPLC analysis coupled with a solid phase extraction column clean-up. Characteristics of this in-house method such as accuracy, precision and detection and quantification limits were defined by means of recovery test with spiked soya bean samples. Out of 50 soya bean samples, 60% showed contamination with the mycotoxins analyzed; among them, 16% were only contaminated with AOH and 14% just with AME. Fifteen of the positive samples showed co-occurrence of both mycotoxins analyzed. AOH was detected in concentrations ranging from 25 to 211 ng/g, whereas AME was found in concentrations ranging from 62 to 1,153 ng/g. Although a limited number of samples were evaluated, this is the first report on the natural occurrence of Alternaria toxins in soya beans and is relevant from the point of view of animal public health.

  12. OCCURRENCE OF VANCOMYCIN RESISTANT ENTEROCOCCI IN ANIMAL FECES

    EPA Science Inventory

    A survey was conducted to determine the occurrence of vancomycin resistant Enterococci (VRE) in animal and human fecal samples. A selective agar mEI, and mEI supplemented with 4 micrograms/ml vancomycin was used in a membrane filtration procedure to determine quantitative levels ...

  13. Report to Congress on abnormal occurrences, October--December 1994. Volume 17, No. 4

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    Section 208 of the Energy Reorganization Act of 1974 identifies an abnormal occurrence (AO) as an unscheduled incident or event that the Nuclear Regulatory Commission determines to be significant from the standpoint of public health or safety and requires a quarterly report of such occurrences to be made to Congress. This report provides a description of those incidents and events that have been determined to be AOs during the period of October 1 through December 31, 1994. This report addresses four AOs at NRC-licensed facilities. These occurrences involved the following: a generic concern relating to core shroud cracking in boilingmore » water reactors; recurring incidents of administering higher doses than procedurally allowed for diagnostic imaging at a single facility; one medical teletherapy misadministration; and one medical brachytherapy misadministration. Agreement States submitted four AO reports. These four occurrences involved the following: one major contamination at a commercial facility; two medical brachytherapy misadministrations; and one medical teletherapy misadministration. The report also contains updates of seven AOs previously reported by NRC licensees and four AOs previously reported by the Agreement States. Two ``Other Events of Interest`` are also being reported. These occurrences involved the operability of safety relief valves at a nuclear power plant, and an error in the installation process of a Leksell Gamma KnifeR teletherapy unit that resulted in an operational failure.« less

  14. Rapid extraction of image texture by co-occurrence using a hybrid data structure

    NASA Astrophysics Data System (ADS)

    Clausi, David A.; Zhao, Yongping

    2002-07-01

    Calculation of co-occurrence probabilities is a popular method for determining texture features within remotely sensed digital imagery. Typically, the co-occurrence features are calculated by using a grey level co-occurrence matrix (GLCM) to store the co-occurring probabilities. Statistics are applied to the probabilities in the GLCM to generate the texture features. This method is computationally intensive since the matrix is usually sparse leading to many unnecessary calculations involving zero probabilities when applying the statistics. An improvement on the GLCM method is to utilize a grey level co-occurrence linked list (GLCLL) to store only the non-zero co-occurring probabilities. The GLCLL suffers since, to achieve preferred computational speeds, the list should be sorted. An improvement on the GLCLL is to utilize a grey level co-occurrence hybrid structure (GLCHS) based on an integrated hash table and linked list approach. Texture features obtained using this technique are identical to those obtained using the GLCM and GLCLL. The GLCHS method is implemented using the C language in a Unix environment. Based on a Brodatz test image, the GLCHS method is demonstrated to be a superior technique when compared across various window sizes and grey level quantizations. The GLCHS method required, on average, 33.4% ( σ=3.08%) of the computational time required by the GLCLL. Significant computational gains are made using the GLCHS method.

  15. A population-based study of the associations of stroke occurrence with weather parameters in Siberia, Russia (1982-92).

    PubMed

    Feigin, V L; Nikitin, Y P; Bots, M L; Vinogradova, T E; Grobbee, D E

    2000-03-01

    Previous studies have established a seasonal variation in stroke occurrence, but none have assessed the influence of inclement weather conditions on stroke incidence in a general population of Russia. We performed a stroke population-based study in the Oktiabrsky District of Novosibirsk, Siberia, Russia. Included in the analysis were 1929 patients with their first occurrence of ischemic stroke (IS), 215 patients with their first occurrence of intracerebral hemorrhage (ICH) and 64 patients with their first occurrence of subarachnoid hemorrhage (SAH): all patients were aged between 25 and 74 years. The cumulative daily occurrence of total strokes and stroke subtypes was evaluated in relation to aggregated daily mean values of ambient temperature, relative humidity and air pressure by means of Poisson regression analysis to estimate the rate ratio (RR) with corresponding confidence interval (CI) and to identify the weather parameters of most importance. In a multivariate analysis, with adjustment for the effects of season, solar and geomagnetic activity, and age of the patients, low ambient temperature (RR 1.32; 95% CI 1.05-1.66) and mean value of air pressure (RR 0.986; 95% CI 0.972-0.999) were important predictors of IS occurrence, while mild ambient temperature (RR 1.52; 95% CI 1. 04-2.22) was an important predictor of ICH occurrence. No relationship between SAH occurrence and any one of the weather parameters studied was revealed. There was no interaction between any meteorological variables that was statistically significant. Inclement weather conditions are associated with the occurrence of IS and ICH in Siberia, Russia. Among the meteorological parameters studied, low ambient temperature and mean air pressure are the most important predictors of IS occurrence, whereas the occurrence of ICH is associated with mild ambient temperature. There is no association between any one of the weather parameters studied and the occurrence of SAH.

  16. Clinical and statistical evaluation of the occurrence of acute myocardial infarction in the cold inland area of Hokkaido.

    PubMed

    Hirasawa, K; Shibata, J; Yamamura, K

    1989-07-01

    We made a clinical and statistical evaluation of the occurrence of acute myocardial infarction with respect to the relation between its occurrence and the meterology of the cold inland area of Hokkaido (the Kamikawa Basin) over a period of 10 years (1976-1985). A total of 581 cases were studied. Monthly fluctuation of incidence was not found to be statistically significant. A cold period in the Kamikawa Basin was defined in this study as the period when ordinary mean atmospheric temperatures were below 0 degree C (from 7 Nov. to 16 Apr.). Canonical discriminant analysis was applied to 10 meterological factors between the days with occurrences and those without occurrences (245 days vs 245 days) in the cold periods of the investigated 10 years, and between the days with outdoor occurrences and those without occurrences (37 days vs 37 days). In order to compare the regional difference, this analysis was done on the same 10 factors for the cold periods over 3 years in Yamagata (46 days vs 46 days). The F values of 0.0003, 0.0155 and 0.0098 respectively in the above 3 analyses were small (much less than F 1(9) (0.25) = 1.51). A circadian rhythm of 2 cycles/day was recognized concerning the time of occurrence by power spectral analysis of the data of 562 patients for whom the time of the onset of myocardial infarction was known. Subdividing the patients into 2 groups according to physical activity just before the occurrence, the group who experienced an occurrence at rest showed a rhythm of 1 cycle/day, and the group who experienced an occurrence on effort showed a rhythm of 2 cycles/day. Therefore, the 10 meterological factors could not discriminate the probabilities between the days with occurrences and the days without occurrences of myocardial infarction in the cold periods. On the other hand, it was suggested that biological intrinsic rhythm participates in triggering the occurrence of myocardial infarction.

  17. Nonculturability Might Underestimate the Occurrence of Campylobacter in Broiler Litter.

    PubMed

    Kassem, Issmat I; Helmy, Yosra A; Kathayat, Dipak; Candelero-Rueda, Rosario A; Kumar, Anand; Deblais, Loic; Huang, Huang-Chi; Sahin, Orhan; Zhang, Qijing; Rajashekara, Gireesh

    2017-08-01

    We investigated the contribution of litter to the occurrence of Campylobacter on three broiler farms, which were known to have low (LO) and high (HI-A and HI-B) Campylobacter prevalence. For this purpose, we collected litter samples (n = 288) during and after two rearing cycles from each farm. We evaluated the occurrence of Campylobacter (using selective enrichment and quantitative real-time polymerase chain reaction [q-PCR] analysis) in the litter samples as well as the litter's pH and moisture content. Ceca from each flock (n = 144) were harvested at slaughter age and used to quantify Campylobacter colony-forming units (CFUs). Campylobacter was only retrieved from 7 litter samples that were collected from HI-A and HI-B during the growing period, but no Campylobacter was isolated from LO farms. The q-PCR analysis detected Campylobacter in pooled litter samples from all three farms. However, in litter collected during the same rotation, Campylobacter levels were significantly higher (p < 0.05) in HI-A and HI-B litter samples in comparison to those in LO. Cecal samples from HI-A and HI-B yielded relatively high numbers of Campylobacter CFUs, which were undetectable in LO samples. Litter's pH and moisture did not affect the overall occurrence of Campylobacter in litter and ceca on any of the farms. Our data suggest that Campylobacter was generally more abundant in litter that was collected from farms with highly colonized flocks. Therefore, better approaches for assessing the occurrence of Campylobacter in litter might be warranted in order to reduce the dissemination of these pathogens on and off poultry farms.

  18. Factors mediating co-occurrence of an economically valuable introduced fish and its native frog prey.

    PubMed

    Hartman, Rosemary; Pope, Karen; Lawler, Sharon

    2014-06-01

    Habitat characteristics mediate predator-prey coexistence in many ecological systems but are seldom considered in species introductions. When economically important introduced predators are stocked despite known negative impacts on native species, understanding the role of refuges, landscape configurations, and community interactions can inform habitat management plans. We measured these factors in basins with introduced trout (Salmonidae) and the Cascades frog (Rana cascadae) to determine, which are responsible for observed patterns of co-occurrence of this economically important predator and its native prey. Large, vegetated shallows were strongly correlated to co-occurrence, and R. cascadae larvae occur in shallower water when fish are present, presumably to escape predation. The number of nearby breeding sites of R. cascadae was also correlated to co-occurrence, but only when the western toad (Anaxyrus boreas) was present. Because A. boreas larvae are unpalatable to fish and resemble R. cascadae, they may provide protection from trout via Batesian mimicry. Although rescue-effect dispersal from nearby populations may maintain co-occurrence, within-lake factors proved more important for predicting co-occurrence. Learning which factors allow co-occurrence between economically important introduced species and their native prey enables managers to make better-informed stocking decisions. © 2013 Society for Conservation Biology.

  19. Accounting for occurrences: a new view of the use of contingency information in causal judgment.

    PubMed

    White, Peter A

    2008-01-01

    When people make causal judgments from contingency information, a principal aim is to account for occurrences of the outcome. When 2 causes are under consideration, the capacity of either to account for occurrences is judged from how likely the cause is to be present when the outcome occurs and from the rate at which the outcome occurs when that cause alone is present, which gives an estimate of the strength of the cause. These propositions are formalized in a weighted averaging model, which successfully predicted several judgmental phenomena not predicted by other models of causal judgment. These include a tendency for judgment of one cause (A) to be reduced as the number of occurrences of when only the other one (B) increases and a tendency for A to receive higher judgments than B if A is better able to account for occurrences than B is even if B has a higher contingency with the outcome than A does. Overshadowing, a tendency for judgments of B to be depressed if A has a higher contingency, is weak or absent when B is better able to account for occurrences than A. Results of several experiments support these and related predictions derived from the accounting for occurrences hypothesis. PsycINFO Database Record (c) 2008 APA, all rights reserved.

  20. Environmental heterogeneity, dispersal mode, and co-occurrence in stream macroinvertebrates

    PubMed Central

    Heino, Jani

    2013-01-01

    Both environmental heterogeneity and mode of dispersal may affect species co-occurrence in metacommunities. Aquatic invertebrates were sampled in 20–30 streams in each of three drainage basins, differing considerably in environmental heterogeneity. Each drainage basin was further divided into two equally sized sets of sites, again differing profoundly in environmental heterogeneity. Benthic invertebrate data were divided into three groups of taxa based on overland dispersal modes: passive dispersers with aquatic adults, passive dispersers with terrestrial winged adults, and active dispersers with terrestrial winged adults. The co-occurrence of taxa in each dispersal mode group, drainage basin, and heterogeneity site subset was measured using the C-score and its standardized effect size. The probability of finding high levels of species segregation tended to increase with environmental heterogeneity across the drainage basins. These patterns were, however, contingent on both dispersal mode and drainage basin. It thus appears that environmental heterogeneity and dispersal mode interact in affecting co-occurrence in metacommunities, with passive dispersers with aquatic adults showing random patterns irrespective of environmental heterogeneity, and active dispersers with terrestrial winged adults showing increasing segregation with increasing environmental heterogeneity. PMID:23467653

  1. Predicting Seagrass Occurrence in a Changing Climate Using Random Forests

    NASA Astrophysics Data System (ADS)

    Aydin, O.; Butler, K. A.

    2017-12-01

    Seagrasses are marine plants that can quickly sequester vast amounts of carbon (up to 100 times more and 12 times faster than tropical forests). In this work, we present an integrated GIS and machine learning approach to build a data-driven model of seagrass presence-absence. We outline a random forest approach that avoids the prevalence bias in many ecological presence-absence models. One of our goals is to predict global seagrass occurrence from a spatially limited training sample. In addition, we conduct a sensitivity study which investigates the vulnerability of seagrass to changing climate conditions. We integrate multiple data sources including fine-scale seagrass data from MarineCadastre.gov and the recently available globally extensive publicly available Ecological Marine Units (EMU) dataset. These data are used to train a model for seagrass occurrence along the U.S. coast. In situ oceans data are interpolated using Empirical Bayesian Kriging (EBK) to produce globally extensive prediction variables. A neural network is used to estimate probable future values of prediction variables such as ocean temperature to assess the impact of a warming climate on seagrass occurrence. The proposed workflow can be generalized to many presence-absence models.

  2. Upper Pleistocene Gulo gulo (Linne, 1758) remains from the Srbsko Chlum-Komin Hyena den cave in the Bohemian Karst, Czech Republic, with comparisons to contemporary wolverines

    Treesearch

    Cajus G. Diedrich; Jeffrey P. Copeland

    2010-01-01

    Wolverine bone material is described from the famous Upper Pleistocene cave Srbsko Chlum-Komin in the Bohemian Karst, Czech Republic, along with an overview of recently known Czech sites. The Gulo gulo Linne material was found in one of the largest Ice Age spotted-hyena dens in Europe. As a result of non-systematic excavations, the taphonomy is partly unclear. Lower-...

  3. Smoked aluminum track stations record flying squirrel occurrence

    Treesearch

    Martin G. Raphael; Cathy A. Taylor; Reginald H. Barrett

    1986-01-01

    Smoked aluminum track stations are a useful technique for studying patterns of abundance and distribution of northern flying squirrel (Glaucomys sabrinus). They are easily transported to remote field sites, allow permanent preservation of tracks, and yield frequency-of-occurrence information. A study in Douglas-fir (Pseseudotsuga menziesii...

  4. A STELLAR-MASS-DEPENDENT DROP IN PLANET OCCURRENCE RATES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mulders, Gijs D.; Pascucci, Ilaria; Apai, Dániel

    2015-01-10

    The Kepler spacecraft has discovered a large number of planets with up to one-year periods and down to terrestrial sizes. While the majority of the target stars are main-sequence dwarfs of spectral type F, G, and K, Kepler covers stars with effective temperatures as low as 2500 K, which corresponds to M stars. These cooler stars allow characterization of small planets near the habitable zone, yet it is not clear if this population is representative of that around FGK stars. In this paper, we calculate the occurrence of planets around stars of different spectral types as a function of planetmore » radius and distance from the star and show that they are significantly different from each other. We further identify two trends. First, the occurrence of Earth- to Neptune-sized planets (1-4 R {sub ⊕}) is successively higher toward later spectral types at all orbital periods probed by Kepler; planets around M stars occur twice as frequently as around G stars, and thrice as frequently as around F stars. Second, a drop in planet occurrence is evident at all spectral types inward of a ∼10 day orbital period, with a plateau further out. By assigning to each spectral type a median stellar mass, we show that the distance from the star where this drop occurs is stellar mass dependent, and scales with semi-major axis as the cube root of stellar mass. By comparing different mechanisms of planet formation, trapping, and destruction, we find that this scaling best matches the location of the pre-main-sequence co-rotation radius, indicating efficient trapping of migrating planets or planetary building blocks close to the star. These results demonstrate the stellar-mass dependence of the planet population, both in terms of occurrence rate and of orbital distribution. The prominent stellar-mass dependence of the inner boundary of the planet population shows that the formation or migration of planets is sensitive to the stellar parameters.« less

  5. Environmental occurrence of arsenic in Colombia: a review.

    PubMed

    Alonso, David L; Latorre, Sergio; Castillo, Elianna; Brandão, Pedro F B

    2014-03-01

    The international literature on the presence of arsenic (As) in Latin America does not disclose the true magnitude of the presence of As in Colombia. In this paper, we summarize the literature on As occurrence in Colombia. The data reveal that As is present in matrices such as soil, sediments and water and in the food chain. Some of the As concentrations exceed the limits specified by national and international regulations. Arsenic higher concentrations are associated with mining regions (e.g., soils, up to 148 mg/kg; sediments, up to 1400 mg/kg) and agricultural areas (e.g., vegetables, up to 5.40 mg/kg; irrigation water, up to 255 μg/L), and underscore the potential human and environmental risks associated with the presence of As in the country. This review highlights the importance of focusing research on understanding the occurrence, origin and distribution of As in Colombia to better understand its environmental and public health impact. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. A bootstrap based space-time surveillance model with an application to crime occurrences

    NASA Astrophysics Data System (ADS)

    Kim, Youngho; O'Kelly, Morton

    2008-06-01

    This study proposes a bootstrap-based space-time surveillance model. Designed to find emerging hotspots in near-real time, the bootstrap based model is characterized by its use of past occurrence information and bootstrap permutations. Many existing space-time surveillance methods, using population at risk data to generate expected values, have resulting hotspots bounded by administrative area units and are of limited use for near-real time applications because of the population data needed. However, this study generates expected values for local hotspots from past occurrences rather than population at risk. Also, bootstrap permutations of previous occurrences are used for significant tests. Consequently, the bootstrap-based model, without the requirement of population at risk data, (1) is free from administrative area restriction, (2) enables more frequent surveillance for continuously updated registry database, and (3) is readily applicable to criminology and epidemiology surveillance. The bootstrap-based model performs better for space-time surveillance than the space-time scan statistic. This is shown by means of simulations and an application to residential crime occurrences in Columbus, OH, year 2000.

  7. Topical video object discovery from key frames by modeling word co-occurrence prior.

    PubMed

    Zhao, Gangqiang; Yuan, Junsong; Hua, Gang; Yang, Jiong

    2015-12-01

    A topical video object refers to an object, that is, frequently highlighted in a video. It could be, e.g., the product logo and the leading actor/actress in a TV commercial. We propose a topic model that incorporates a word co-occurrence prior for efficient discovery of topical video objects from a set of key frames. Previous work using topic models, such as latent Dirichelet allocation (LDA), for video object discovery often takes a bag-of-visual-words representation, which ignored important co-occurrence information among the local features. We show that such data driven co-occurrence information from bottom-up can conveniently be incorporated in LDA with a Gaussian Markov prior, which combines top-down probabilistic topic modeling with bottom-up priors in a unified model. Our experiments on challenging videos demonstrate that the proposed approach can discover different types of topical objects despite variations in scale, view-point, color and lighting changes, or even partial occlusions. The efficacy of the co-occurrence prior is clearly demonstrated when compared with topic models without such priors.

  8. Variability of tornado occurrence over the continental United States since 1950

    NASA Astrophysics Data System (ADS)

    Guo, Li; Wang, Kaicun; Bluestein, Howard B.

    2016-06-01

    The United States experiences the most tornadoes of any country in the world. Given the catastrophic impact of tornadoes, concern has arisen regarding the variation in climatology of U.S. tornadoes under the changing climate. A recent study claimed that the temporal variability of tornado occurrence over the continental U.S. has increased since the 1970s. However, that study ignored the highly regionalized climatology of U.S. tornadoes. To address this issue, we examined the long-term trend of tornado temporal variability in each continental U.S. state. Based on the 64 year tornado records (1950-2013), we found that the trends in tornado temporal variability varied across the U.S., with only one third of the continental area or three out of 10 contiguous states (mostly from the Great Plains and Southeast, but where the frequency of occurrence of tornadoes is greater) displaying a significantly increasing trend. The other two-thirds area, where 60% of the U.S. tornadoes were reported (but the frequency of occurrence of tornadoes is less), however, showed a decreasing or a near-zero trend in tornado temporal variability. Furthermore, unlike the temporal variability alone, the combined spatial-temporal variability of U.S. tornado occurrence has remained nearly constant since 1950. Such detailed information on the climatological variability of U.S. tornadoes refines the claim of previous study and can be helpful for local mitigation efforts toward future tornado risks.

  9. Occurrence of Multiple Sclerosis After Drug Exposure: Insights From Evidence Mapping.

    PubMed

    Antonazzo, Ippazio Cosimo; Raschi, Emanuel; Vignatelli, Luca; Baldin, Elisa; Riise, Trond; D'Alessandro, Roberto; De Ponti, Fabrizio; Poluzzi, Elisabetta

    2017-09-01

    The role of drugs in the occurrence of multiple sclerosis (MS) is perceived to be insufficiently investigated. The aim of this study was to map and assess the evidence on MS occurrence after drug exposure, in order to identify possible signals of causal association. A search strategy was performed in MEDLINE and Embase as of July 2016; references consistent with the aim of the study were analysed to extract relevant measures of causal association between drugs and MS. The Newcastle-Ottawa Scale and appropriate guidelines from the International Society for Pharmacoepidemiology (ISPE) and the International Society of Pharmacovigilance (ISoP) were used to assess the quality of included studies. After screening 832 articles, 58 were selected (of which 14 were found by checking the reference lists of reviews): 30 case reports and case series, 24 longitudinal studies and four randomized controlled trials. Seven longitudinal studies had good (at least 7 out of 9) quality scores, whereas case reports/case series presented several limitations. Half of included articles focused on immunomodulatory drugs (etanercept, infliximab and adalimumab), especially in case reports/series, suggesting an association with MS occurrence. Contraceptives and antibacterials were investigated in some population-based studies, without definite results. A heterogeneous pharmacological profile of identified classes emerged. Low strength of evidence and conflicting results highlighted the difficulties in addressing the possible contribution of drugs in MS occurrence. Methodological advances are needed, especially to control the confounding role of underlying disease for specific drug classes.

  10. Occurrence of CPPopt Values in Uncorrelated ICP and ABP Time Series.

    PubMed

    Cabeleira, M; Czosnyka, M; Liu, X; Donnelly, J; Smielewski, P

    2018-01-01

    Optimal cerebral perfusion pressure (CPPopt) is a concept that uses the pressure reactivity (PRx)-CPP relationship over a given period to find a value of CPP at which PRx shows best autoregulation. It has been proposed that this relationship be modelled by a U-shaped curve, where the minimum is interpreted as being the CPP value that corresponds to the strongest autoregulation. Owing to the nature of the calculation and the signals involved in it, the occurrence of CPPopt curves generated by non-physiological variations of intracranial pressure (ICP) and arterial blood pressure (ABP), termed here "false positives", is possible. Such random occurrences would artificially increase the yield of CPPopt values and decrease the reliability of the methodology.In this work, we studied the probability of the random occurrence of false-positives and we compared the effect of the parameters used for CPPopt calculation on this probability. To simulate the occurrence of false-positives, uncorrelated ICP and ABP time series were generated by destroying the relationship between the waves in real recordings. The CPPopt algorithm was then applied to these new series and the number of false-positives was counted for different values of the algorithm's parameters. The percentage of CPPopt curves generated from uncorrelated data was demonstrated to be 11.5%. This value can be minimised by tuning some of the calculation parameters, such as increasing the calculation window and increasing the minimum PRx span accepted on the curve.

  11. Occurrence analysis of daily rainfalls by using non-homogeneous Poissonian processes

    NASA Astrophysics Data System (ADS)

    Sirangelo, B.; Ferrari, E.; de Luca, D. L.

    2009-09-01

    In recent years several temporally homogeneous stochastic models have been applied to describe the rainfall process. In particular stochastic analysis of daily rainfall time series may contribute to explain the statistic features of the temporal variability related to the phenomenon. Due to the evident periodicity of the physical process, these models have to be used only to short temporal intervals in which occurrences and intensities of rainfalls can be considered reliably homogeneous. To this aim, occurrences of daily rainfalls can be considered as a stationary stochastic process in monthly periods. In this context point process models are widely used for at-site analysis of daily rainfall occurrence; they are continuous time series models, and are able to explain intermittent feature of rainfalls and simulate interstorm periods. With a different approach, periodic features of daily rainfalls can be interpreted by using a temporally non-homogeneous stochastic model characterized by parameters expressed as continuous functions in the time. In this case, great attention has to be paid to the parsimony of the models, as regards the number of parameters and the bias introduced into the generation of synthetic series, and to the influence of threshold values in extracting peak storm database from recorded daily rainfall heights. In this work, a stochastic model based on a non-homogeneous Poisson process, characterized by a time-dependent intensity of rainfall occurrence, is employed to explain seasonal effects of daily rainfalls exceeding prefixed threshold values. In particular, variation of rainfall occurrence intensity ? (t) is modelled by using Fourier series analysis, in which the non-homogeneous process is transformed into a homogeneous and unit one through a proper transformation of time domain, and the choice of the minimum number of harmonics is evaluated applying available statistical tests. The procedure is applied to a dataset of rain gauges located in

  12. Occurrence of Emerging Micropollutants in Water Systems in Gauteng, Mpumalanga, and North West Provinces, South Africa.

    PubMed

    Wanda, Elijah M M; Nyoni, Hlengilizwe; Mamba, Bhekie B; Msagati, Titus A M

    2017-01-13

    The ubiquitous occurrence of emerging micropollutants (EMPs) in water is an issue of growing environmental-health concern worldwide. However, there remains a paucity of data regarding their levels and occurrence in water. This study determined the occurrence of EMPs namely: carbamazepine (CBZ), galaxolide (HHCB), caffeine (CAF), tonalide (AHTN), 4-nonylphenol (NP), and bisphenol A (BPA) in water from Gauteng, Mpumalanga, and North West provinces, South Africa using comprehensive two-dimensional gas chromatography coupled to high resolution time-of-flight mass spectrometry (GCxGC-HRTOFMS). Kruskal-Wallis test and ANOVA were performed to determine temporal variations in occurrence of the EMPs. Principal component analysis (PCA) and Surfer Golden Graphics software for surface mapping were used to determine spatial variations in levels and occurrence of the EMPs. The mean levels ranged from 11.22 ± 18.8 ng/L for CAF to 158.49 ± 662 ng/L for HHCB. There was no evidence of statistically significant temporal variations in occurrence of EMPs in water. Nevertheless, their levels and occurrence vary spatially and are a function of two principal components (PCs, PC1 and PC2) which controlled 89.99% of the variance. BPA was the most widely distributed EMP, which was present in 62% of the water samples. The detected EMPs pose ecotoxicological risks in water samples, especially those from Mpumalanga province.

  13. Occurrence of Emerging Micropollutants in Water Systems in Gauteng, Mpumalanga, and North West Provinces, South Africa

    PubMed Central

    Wanda, Elijah M. M.; Nyoni, Hlengilizwe; Mamba, Bhekie B.; Msagati, Titus A. M.

    2017-01-01

    The ubiquitous occurrence of emerging micropollutants (EMPs) in water is an issue of growing environmental-health concern worldwide. However, there remains a paucity of data regarding their levels and occurrence in water. This study determined the occurrence of EMPs namely: carbamazepine (CBZ), galaxolide (HHCB), caffeine (CAF), tonalide (AHTN), 4-nonylphenol (NP), and bisphenol A (BPA) in water from Gauteng, Mpumalanga, and North West provinces, South Africa using comprehensive two-dimensional gas chromatography coupled to high resolution time-of-flight mass spectrometry (GCxGC-HRTOFMS). Kruskal-Wallis test and ANOVA were performed to determine temporal variations in occurrence of the EMPs. Principal component analysis (PCA) and Surfer Golden Graphics software for surface mapping were used to determine spatial variations in levels and occurrence of the EMPs. The mean levels ranged from 11.22 ± 18.8 ng/L for CAF to 158.49 ± 662 ng/L for HHCB. There was no evidence of statistically significant temporal variations in occurrence of EMPs in water. Nevertheless, their levels and occurrence vary spatially and are a function of two principal components (PCs, PC1 and PC2) which controlled 89.99% of the variance. BPA was the most widely distributed EMP, which was present in 62% of the water samples. The detected EMPs pose ecotoxicological risks in water samples, especially those from Mpumalanga province. PMID:28098799

  14. The Correlation Between Green Density and the Occurrence of Honeycomb in Kiln-Dried

    Treesearch

    Robert A. Harris; Philip A. Araman

    1995-01-01

    Fresh-cut, 5/4 red oak (Quercus sp.) boards were weighed, measured to determine volume and then kiln-dried to determine if the initial green density (green weight/green volume) was correlated to the occurrence of honeycomb. A positive relationship was found between the occurrence of honeycomb during drying and the initial green density. These results...

  15. Colorado quartz: occurrence and discovery

    USGS Publications Warehouse

    Kile, D.E.; Modreski, P.J.; Kile, D.L.

    1991-01-01

    The many varieties and associations of quartz found throughout the state rank it as one of the premier worldwide localities for that species. This paper briefly outlines the historical importance of the mineral, the mining history and the geological setting before discussing the varieties of quartz present, its crystallography and the geological enviroments in which it is found. The latter include volcanic rocks and near surface igneous rocks; pegmatites; metamorphic and plutonic rocks; hydrothermal veins; skarns and sedimentary deposits. Details of the localities and mode of occurrence of smoky quartz, amethyst, milky quartz, rock crystal, rose quartz, citrine, agate and jasper are then given. -S.J.Stone

  16. The sensitivity of US wildfire occurrence to pre-season soil moisture conditions across ecosystems.

    PubMed

    Jensen, Daniel; Reager, John T; Zajic, Brittany; Rousseau, Nick; Rodell, Matthew; Hinkley, Everett

    2018-01-01

    It is generally accepted that year-to-year variability in moisture conditions and drought are linked with increased wildfire occurrence. However, quantifying the sensitivity of wildfire to surface moisture state at seasonal lead-times has been challenging due to the absence of a long soil moisture record with the appropriate coverage and spatial resolution for continental-scale analysis. Here we apply model simulations of surface soil moisture that numerically assimilate observations from NASA's Gravity Recovery and Climate Experiment (GRACE) mission with the US Forest Service's historical Fire-Occurrence Database over the contiguous United States. We quantify the relationships between pre-fire-season soil moisture and subsequent-year wildfire occurrence by land-cover type and produce annual probable wildfire occurrence and burned area maps at 0.25-degree resolution. Cross-validated results generally indicate a higher occurrence of smaller fires when months preceding fire season are wet, while larger fires are more frequent when soils are dry. This result is consistent with the concept of increased fuel accumulation under wet conditions in the pre-season. These results demonstrate the fundamental strength of the relationship between soil moisture and fire activity at long lead-times and are indicative of that relationship's utility for the future development of national-scale predictive capability.

  17. The sensitivity of US wildfire occurrence to pre-season soil moisture conditions across ecosystems

    NASA Astrophysics Data System (ADS)

    Jensen, Daniel; Reager, John T.; Zajic, Brittany; Rousseau, Nick; Rodell, Matthew; Hinkley, Everett

    2018-01-01

    It is generally accepted that year-to-year variability in moisture conditions and drought are linked with increased wildfire occurrence. However, quantifying the sensitivity of wildfire to surface moisture state at seasonal lead-times has been challenging due to the absence of a long soil moisture record with the appropriate coverage and spatial resolution for continental-scale analysis. Here we apply model simulations of surface soil moisture that numerically assimilate observations from NASA’s Gravity Recovery and Climate Experiment (GRACE) mission with the USDA Forest Service’s historical Fire-Occurrence Database over the contiguous United States. We quantify the relationships between pre-fire-season soil moisture and subsequent-year wildfire occurrence by land-cover type and produce annual probable wildfire occurrence and burned area maps at 0.25 degree resolution. Cross-validated results generally indicate a higher occurrence of smaller fires when months preceding fire season are wet, while larger fires are more frequent when soils are dry. This is consistent with the concept of increased fuel accumulation under wet conditions in the pre-season. These results demonstrate the fundamental strength of the relationship between soil moisture and fire activity at long lead-times and are indicative of that relationship’s utility for the future development of national-scale predictive capability.

  18. Microbial communities associated with human decomposition and their potential use as postmortem clocks.

    PubMed

    Finley, Sheree J; Benbow, M Eric; Javan, Gulnaz T

    2015-05-01

    Most forensic research that is used to better understand how to estimate the postmortem interval (PMI) entails the study of the physiochemical characteristics of decomposition and the effects that environmental factors have on the decomposition process. Forensic entomology exploits the life cycles of arthropods like Diptera (blow flies or flesh flies) and Coleoptera (beetles) deposited on the decaying carcass to determine PMI. Forensic taphonomy, from the Greek word taphos meaning burial, studies the creation of the fossils of decomposed cadavers to ascertain information as to the nature and time of death. Compared to other areas of taphonomy, there have been relatively few forensic science studies that have investigated the impact of human decomposition on the microbial changes occurring on or in a corpse or in the soil communities underneath a body. Such research may facilitate the critical determination of PMI. Therefore, the scope of this review is to provide a concise summary of the current progress in the newly emerging field of microbial diversity and the next-generation metagenomic sequencing approaches for assessing these communities in humans and in the soil beneath decomposing human.

  19. Occurrence of priority organic pollutants in the fertilizers, China.

    PubMed

    Mo, Ce-Hui; Cai, Quan-Ying; Li, Yun-Hui; Zeng, Qiao-Yun

    2008-04-15

    The use of large quantities of chemical fertilizers is usually associated with environmental problems. A lot of work has been done on the concentrations of heavy metals and radionuclides in chemical fertilizers, but little work has focused on the occurrence of semi-volatile organic compounds (SVOCs). In this study the occurrence of 43 SVOCs listed as priority pollutants in 22 widely used-fertilizers of China was determined by gas chromatography coupled with mass spectrometry. Twenty-six SVOCs were detected with different detection frequencies and concentrations. The most abundant compounds were phthalic acid esters (PAEs; ranging from 1.17 to 2795 microg kg(-1) dry weight, d.w.) and nitroaromatics (up to 9765 microg kg(-1) d.w.), followed by polycyclic aromatic hydrocarbons (PAHs; <140 microg kg(-1) d.w.) and halogenated hydrocarbons (<900 microg kg(-1) d.w.). Chlorobenzenes and haloethers occurred generally at low concentrations. There are large variations in concentrations of various compounds in different fertilizers, and the total concentrations of each class of contaminants varied widely, too. The highest levels of sum concentration for 16 PAHs, for 6 PAEs and for nitroaromatics were found in organic fertilizer containing pesticide and soil amendments. Concentrations of SVOCs in coated fertilizers (the controlled release fertilizer with coating) were considerably higher than those in the corresponding fertilizers without coating. The occurrence frequencies of SVOCs in the straight fertilizers (containing only one of the major plant nutrients) were lower than in the other fertilizers.

  20. Subgingival Epstein-Barr and cytomegalovirus occurrence in pregnancy gingivitis.

    PubMed

    Ereş, Gülden; Altıok, Elif; Ozkul, Aykut; Açıkel, Cengiz Han

    2011-12-01

    Although recent studies focused on the role of human herpesviruses in various types of periodontal disease, there was a lack of information in these reports regarding the role of pregnancy gingivitis. The aim of this study is to determine the correlation between pregnancy and the subgingival virus presence and their relationship with clinical parameters. Seventy pregnant and 40 non-pregnant women were examined for gingival and plaque indices, bleeding on probing (BOP), and clinical probing depths (PDs) from the whole dentition. Subgingival plaque samples were obtained from sites showing signs of gingivitis and healthy sites. The polymerase chain reaction methodology was used to detect cytomegalovirus (CMV) and Epstein-Barr virus (EBV) from plaque samples. Our results show that gingivitis lesions in 27 (38.6%) and 10 (14.3%) pregnant patients were positive for EBV and CMV, respectively. In the non-pregnant group, EBV and CMV were detected in six (15%) and eight (20%) lesions, respectively. A statistically significant difference (P <0.01) was found between the subgingival occurrence of EBV in the two groups. In gingivitis sites, clinical PDs were affected by gestation (P <0.001) and the occurrence of EBV (P <0.001). In healthy sites, clinical PDs were affected by gestation (P <0.05), and BOP was affected by the occurrence of CMV and EBV (P <0.001). Our data indicate that pregnancy increased the risk of the presence of subgingival EBV in pregnant women by 3.647 times more than in non-pregnant women.

  1. Characteristics of cloud occurrence using ceilometer measurements and its relationship to precipitation over Seoul

    NASA Astrophysics Data System (ADS)

    Lee, Sanghee; Hwang, Seung-On; Kim, Jhoon; Ahn, Myoung-Hwan

    2018-03-01

    Clouds are an important component of the atmosphere that affects both climate and weather, however, their contributions can be very difficult to determine. Ceilometer measurements can provide high resolution information on atmospheric conditions such as cloud base height (CBH) and vertical frequency of cloud occurrence (CVF). This study presents the first comprehensive analysis of CBH and CVF derived using Vaisala CL51 ceilometers at two urban stations in Seoul, Korea, during a three-year period from January 2014 to December 2016. The average frequency of cloud occurrence detected by the ceilometers is 54.3%. It is found that the CL51 is better able to capture CBH as compared to another ceilometer CL31 at a nearby meteorological station because it could detect high clouds more accurately. Frequency distributions for CBH up to 13,000 m providing detailed vertical features with 500-m interval show 55% of CBHs below 2 km for aggregated CBHs. A bimodal frequency distribution was observed for three-layers CBHs. A monthly variation of CVF reveals that frequency concentration of lower clouds is found in summer and winter, and higher clouds more often detected in spring and autumn. Monthly distribution features of cloud occurrence and precipitation are depending on seasons and it might be easy to define their relationship due to higher degree of variability of precipitation than cloud occurrence. However, a fluctuation of cloud occurrence frequency in summer is similar to precipitation in trend, whereas clouds in winter are relatively frequent but precipitation is not accompanied. In addition, recent decrease of summer precipitation could be mostly explained by a decrease of cloud occurrence. Anomalous precipitation recorded sometimes is considerably related to corresponding cloud occurrence. The diurnal and daily variations of CBH and CVF from ceilometer observations and the analysis of microwave radiometer measurements for two typical cloudiness cases are also reviewed

  2. Occurrence of ion upflow associated with ion/electron heating in the polar cap and cusp regions

    NASA Astrophysics Data System (ADS)

    Ji, E. Y.; Jee, G.; Kwak, Y. S.

    2017-12-01

    We investigate the occurrence frequency of ion upflow in association with ion/electron heating in the polar cap and cusp regions, using the data obtained from the European Incoherent Scatter Svalbard radar (ESR) during the period of 2000 to 2010. We classify the upflow events by four cases: driven by ion heating (case 1), electron heating (case 2), both ion and electron heatings (case 3), and without any heating (case 4). The statistical analysis of the data shows that the upflow normaly starts at around 350 km altitude and the occurrence seems to peak at 11 MLT. Among the four cases, the occurrence frequency of the upflow is maximized for the case 3 and then followed by case 2, case 1 and case 3, which indicates that both ion and electron heatings are associated with ion upflow. At around 500 km altitude, however, the occurrence frequency is maximized when there is no heating (case 4). We also investigate the dependence of the occurrence frequency of the upflow on Kp and F10.7 indices. The maximum occurrence frequency seems to occur at moderate geomagnetic condition (2 ≤ Kp < 5). As for the solar activity, the occurrence frequency is higher for low solar activity than for high solar activity. The results of this study suggest that the ion upflow occurring in the polar cap/cusp region is mostly driven by both ion and electron heatings.

  3. Population viability analysis with species occurrence data from museum collections.

    PubMed

    Skarpaas, Olav; Stabbetorp, Odd E

    2011-06-01

    The most comprehensive data on many species come from scientific collections. Thus, we developed a method of population viability analysis (PVA) in which this type of occurrence data can be used. In contrast to classical PVA, our approach accounts for the inherent observation error in occurrence data and allows the estimation of the population parameters needed for viability analysis. We tested the sensitivity of the approach to spatial resolution of the data, length of the time series, sampling effort, and detection probability with simulated data and conducted PVAs for common, rare, and threatened species. We compared the results of these PVAs with results of standard method PVAs in which observation error is ignored. Our method provided realistic estimates of population growth terms and quasi-extinction risk in cases in which the standard method without observation error could not. For low values of any of the sampling variables we tested, precision decreased, and in some cases biased estimates resulted. The results of our PVAs with the example species were consistent with information in the literature on these species. Our approach may facilitate PVA for a wide range of species of conservation concern for which demographic data are lacking but occurrence data are readily available. ©2011 Society for Conservation Biology.

  4. Occurrence and persistence of magnetic elements in the quiet Sun

    NASA Astrophysics Data System (ADS)

    Giannattasio, F.; Berrilli, F.; Consolini, G.; Del Moro, D.; Gošić, M.; Bellot Rubio, L.

    2018-03-01

    Context. Turbulent convection efficiently transports energy up to the solar photosphere, but its multi-scale nature and dynamic properties are still not fully understood. Several works in the literature have investigated the emergence of patterns of convective and magnetic nature in the quiet Sun at spatial and temporal scales from granular to global. Aims: To shed light on the scales of organisation at which turbulent convection operates, and its relationship with the magnetic flux therein, we studied characteristic spatial and temporal scales of magnetic features in the quiet Sun. Methods: Thanks to an unprecedented data set entirely enclosing a supergranule, occurrence and persistence analysis of magnetogram time series were used to detect spatial and long-lived temporal correlations in the quiet Sun and to investigate their nature. Results: A relation between occurrence and persistence representative for the quiet Sun was found. In particular, highly recurrent and persistent patterns were detected especially in the boundary of the supergranular cell. These are due to moving magnetic elements undergoing motion that behaves like a random walk together with longer decorrelations ( 2 h) with respect to regions inside the supergranule. In the vertices of the supegranular cell the maximum observed occurrence is not associated with the maximum persistence, suggesting that there are different dynamic regimes affecting the magnetic elements.

  5. Crop scents affect the occurrence of trophallaxis among forager honeybees.

    PubMed

    Gil, M; Farina, W M

    2003-05-01

    Previous evidence indicates that the recognition of the nectar delivered by forager honeybees within the colony may have been a primitive method of communication on food resources. Thus, the association between scent and reward that nectar foragers establish while they collect on a given flower species should be retrieved during trophallaxis, i.e., the transfer of liquid food by mouth, and, accordingly, foraging experience could affect the occurrence of these interactions inside the nest. We used experimental arenas to analyze how crop scents carried by donor bees affect trophallaxis among foragers, i.e., donors and receivers, which differ in their foraging experience. Results showed that whenever the foragers had collected unscented sugar solution from a feeder the presence of scents in the solution carried by donors did not affect the occurrence of trophallaxis nor its dynamics. In contrast, whenever the foragers had previous olfactory information, new scents present in the crop of the donors negatively affected the occurrence, but not the dynamics of trophallaxis. Thus, the association learned at the food source seems to be retrieved during trophallaxis, and it is possible that known scents present in the mouthparts of nest-mates may operate as a triggering stimulus to elicit trophallactic behavior within the hive.

  6. Co-Occurrence of Linguistic and Behavioural Difficulties in Early Childhood: A Developmental Psychopathology Perspective

    ERIC Educational Resources Information Center

    Carpenter, Johanna L.; Drabick, Deborah A. G.

    2011-01-01

    Three hypotheses have been posited as competing explanations for the comorbidity or co-occurrence of language difficulties and behavioural problems among children: (1) language difficulties confer risk for behaviour problems, (2) behaviour problems confer risk for language difficulties, and (3) shared risk factors account for their co-occurrence.…

  7. The Occurrence and Prevalence of Giraffe Skin Disease in Protected Areas of Northern Tanzania.

    PubMed

    Lee, Derek E; Bond, Monica L

    2016-07-01

    Giraffe skin disease (GSD) is a disorder of undetermined etiology that causes lesions on the forelimbs of Masai giraffe ( Giraffa camelopardalis tippelskirchi). We estimated occurrence and prevalence of GSD in six wildlife conservation areas of Tanzania. The disjunct spatial pattern of occurrence implies that environmental factors may influence GSD.

  8. Six-Year Review 2 Contaminant Occurrence Data (1998-2005)

    EPA Pesticide Factsheets

    In March 2010, EPA announced the review results for the Agency’s second Six-Year Review. EPA analyzed occurrence data for the Six-Year Review 2 for 69 regulated contaminants, using data provided by 47 states or primacy agencies.

  9. Are prescribed fire and thinning dominant processes affecting snag occurrence at a landscape scale?

    DOE PAGES

    Zarnoch, Stanley J.; Blake, John I.; Parresol, Bernard R.

    2014-11-01

    Snags are standing dead trees that are an important component in the nesting habitat of birds and other species. Although snag availability is believed to limit populations in managed and non-managed forests, little data are available to evaluate the relative effect of stand conditions and management on snag occurrence. We analyzed point sample data from an intensive forest inventory within an 80,000 ha landscape for four major forest types to support the hypotheses that routine low-intensity prescribed fire would increase, and thinning would decrease, snag occurrence. We employed path analysis to define a priori causal relationships to determine the directmore » and indirect effects of site quality, age, relative stand density index and fire for all forest types and thinning effects for loblolly pine and longleaf pine. Stand age was an important direct effect for loblolly pine, mixed pine-hardwoods and hardwoods, but not for longleaf pine. Snag occurrence in loblolly pine was increased by prescribed fire and decreased by thinning which confirmed our initial hypotheses. Although fire was not important in mixed pine-hardwoods, it was for hardwoods but the relationship depended on site quality. For longleaf pine the relative stand density index was the dominant variable affecting snag occurrence, which increased as the density index decreased. Site quality, age and thinning had significant indirect effects on snag occurrence in longleaf pine through their effects on the density index. Although age is an important condition affecting snag occurrence for most forest types, path analysis revealed that fire and density management practices within certain forest types can also have major beneficial effects, particularly in stands less than 60 years old.« less

  10. Using taphonomy to infer differences in soft tissues between taxa: an example using basal and derived forms of Solnhofen pterosaurs.

    PubMed

    Beardmore, S R; Lawlor, E; Hone, D W E

    2017-08-01

    In fossilised vertebrates, the presence of soft tissues is the most obvious way to determine aspects of anatomy and functional morphology; however, occurrences are rare and other lines of evidence must be sought to indicate its extent and strength. For example, pterosaurs possessed a large wing membrane that enabled powered flight but other tissues are not widely preserved. A semi-quantitative analysis comparing skeletal articulation and completeness of the pterodactyloid Pterodactylus and non-pterodactyloid pterosaur Rhamphorhynchus from Solnhofen-type deposits implies there were anatomical differences between soft-tissue structure and attachments articulating skeletal joints of each. Typically, skeletons of Pterodactylus disarticulate to a greater extent than those of Rhamphorhynchus, which in turn suggests decay progressed to more advanced states in the former. However, this generalisation masks a mosaic of differences between different body parts, for example Rhamphorhynchus tends to lose the wings as complete units but retains a complete and still articulated tail in a greater number of specimens than Pterodactylus.

  11. Using taphonomy to infer differences in soft tissues between taxa: an example using basal and derived forms of Solnhofen pterosaurs

    NASA Astrophysics Data System (ADS)

    Beardmore, S. R.; Lawlor, E.; Hone, D. W. E.

    2017-08-01

    In fossilised vertebrates, the presence of soft tissues is the most obvious way to determine aspects of anatomy and functional morphology; however, occurrences are rare and other lines of evidence must be sought to indicate its extent and strength. For example, pterosaurs possessed a large wing membrane that enabled powered flight but other tissues are not widely preserved. A semi-quantitative analysis comparing skeletal articulation and completeness of the pterodactyloid Pterodactylus and non-pterodactyloid pterosaur Rhamphorhynchus from Solnhofen-type deposits implies there were anatomical differences between soft-tissue structure and attachments articulating skeletal joints of each. Typically, skeletons of Pterodactylus disarticulate to a greater extent than those of Rhamphorhynchus, which in turn suggests decay progressed to more advanced states in the former. However, this generalisation masks a mosaic of differences between different body parts, for example Rhamphorhynchus tends to lose the wings as complete units but retains a complete and still articulated tail in a greater number of specimens than Pterodactylus.

  12. Health risk factors as predictors of workers' compensation claim occurrence and cost

    PubMed Central

    Schwatka, Natalie V; Atherly, Adam; Dally, Miranda J; Fang, Hai; vS Brockbank, Claire; Tenney, Liliana; Goetzel, Ron Z; Jinnett, Kimberly; Witter, Roxana; Reynolds, Stephen; McMillen, James; Newman, Lee S

    2017-01-01

    Objective The objective of this study was to examine the predictive relationships between employee health risk factors (HRFs) and workers' compensation (WC) claim occurrence and costs. Methods Logistic regression and generalised linear models were used to estimate the predictive association between HRFs and claim occurrence and cost among a cohort of 16 926 employees from 314 large, medium and small businesses across multiple industries. First, unadjusted (HRFs only) models were estimated, and second, adjusted (HRFs plus demographic and work organisation variables) were estimated. Results Unadjusted models demonstrated that several HRFs were predictive of WC claim occurrence and cost. After adjusting for demographic and work organisation differences between employees, many of the relationships previously established did not achieve statistical significance. Stress was the only HRF to display a consistent relationship with claim occurrence, though the type of stress mattered. Stress at work was marginally predictive of a higher odds of incurring a WC claim (p<0.10). Stress at home and stress over finances were predictive of higher and lower costs of claims, respectively (p<0.05). Conclusions The unadjusted model results indicate that HRFs are predictive of future WC claims. However, the disparate findings between unadjusted and adjusted models indicate that future research is needed to examine the multilevel relationship between employee demographics, organisational factors, HRFs and WC claims. PMID:27530688

  13. Brief Communication: Is there a wind connection to freaque wave occurrences?

    NASA Astrophysics Data System (ADS)

    Liu, P. C.; Bouchard, R.; Rogers, W. E.; Babanin, A. V.; Wang, D. W.

    2015-01-01

    There was a recent freaque wave encounter near Scituate, Massachusetts by a local transport ferry en route from Provincetown to Boston. The encounter resulted in minimal damages, fortunately, and provided us a chance to examine a possible connection between the freaque wave occurrence and the ambient wind field, since the place of encounter was in the vicinity of a NOAA NDBC buoy where wind and wave data were recorded. Here we present a brief analysis. In particular, we found it is plausible that the freaque wave was the result of a wind speed reduction in the wind field that preceded its occurrence.

  14. Mining co-occurrence and sequence patterns from cancer diagnoses in New York State.

    PubMed

    Wang, Yu; Hou, Wei; Wang, Fusheng

    2018-01-01

    The goal of this study is to discover disease co-occurrence and sequence patterns from large scale cancer diagnosis histories in New York State. In particular, we want to identify disparities among different patient groups. Our study will provide essential knowledge for clinical researchers to further investigate comorbidities and disease progression for improving the management of multiple diseases. We used inpatient discharge and outpatient visit records from the New York State Statewide Planning and Research Cooperative System (SPARCS) from 2011-2015. We grouped each patient's visit history to generate diagnosis sequences for seven most popular cancer types. We performed frequent disease co-occurrence mining using the Apriori algorithm, and frequent disease sequence patterns discovery using the cSPADE algorithm. Different types of cancer demonstrated distinct patterns. Disparities of both disease co-occurrence and sequence patterns were observed from patients within different age groups. There were also considerable disparities in disease co-occurrence patterns with respect to different claim types (i.e., inpatient, outpatient, emergency department and ambulatory surgery). Disparities regarding genders were mostly found where the cancer types were gender specific. Supports of most patterns were usually higher for males than for females. Compared with secondary diagnosis codes, primary diagnosis codes can convey more stable results. Two disease sequences consisting of the same diagnoses but in different orders were usually with different supports. Our results suggest that the methods adopted can generate potentially interesting and clinically meaningful disease co-occurrence and sequence patterns, and identify disparities among various patient groups. These patterns could imply comorbidities and disease progressions.

  15. Spatial controls of occurrence and spread of wildfires in the Missouri Ozark Highlands.

    PubMed

    Yang, Jian; He, Hong S; Shifley, Stephen R

    2008-07-01

    Understanding spatial controls on wildfires is important when designing adaptive fire management plans and optimizing fuel treatment locations on a forest landscape. Previous research about this topic focused primarily on spatial controls for fire origin locations alone. Fire spread and behavior were largely overlooked. This paper contrasts the relative importance of biotic, abiotic, and anthropogenic constraints on the spatial pattern of fire occurrence with that on burn probability (i.e., the probability that fire will spread to a particular location). Spatial point pattern analysis and landscape succession fire model (LANDIS) were used to create maps to show the contrast. We quantified spatial controls on both fire occurrence and fire spread in the Midwest Ozark Highlands region, USA. This area exhibits a typical anthropogenic surface fire regime. We found that (1) human accessibility and land ownership were primary limiting factors in shaping clustered fire origin locations; (2) vegetation and topography had a negligible influence on fire occurrence in this anthropogenic regime; (3) burn probability was higher in grassland and open woodland than in closed-canopy forest, even though fire occurrence density was less in these vegetation types; and (4) biotic and abiotic factors were secondary descriptive ingredients for determining the spatial patterns of burn probability. This study demonstrates how fire occurrence and spread interact with landscape patterns to affect the spatial distribution of wildfire risk. The application of spatial point pattern data analysis would also be valuable to researchers working on landscape forest fire models to integrate historical ignition location patterns in fire simulation.

  16. Occurrence and amount of microplastic ingested by fishes in watersheds of the Gulf of Mexico.

    PubMed

    Phillips, Melissa B; Bonner, Timothy H

    2015-11-15

    Ingestion of microplastics by fishes could be an emerging environmental crisis because of the proliferation of plastic pollution in aquatic environments. Microplastics in marine ecosystems are well documented, however only one study has reported percent occurrence of microplastics in freshwater fishes. The purpose of this study was to quantify the occurrences and types of microplastics ingested by fishes within several freshwater drainages of the Gulf of Mexico and an estuary of the Gulf of Mexico. Among 535 fishes examined in this study, 8% of the freshwater fishes and 10% of the marine fishes had microplastics in their gut tract. Percentage occurrence of microplastics ingested by fishes in non-urbanized streams (5%) was less than that of one of the urbanized streams (Neches River; 29%). Percent occurrence of microplastics by habitat (i.e., benthic, pelagic) and trophic guilds (herbivore/omnivore, invertivore, carnivore) were similar. Low but widespread occurrences among drainages, habitat guilds, and trophic guilds indicate proliferation of plastic pollution within watersheds of the Gulf of Mexico, but consequences to fish health are unknown at this time. Copyright © 2015 Elsevier Ltd. All rights reserved.

  17. Common raven occurrence in relation to energy transmission line corridors transiting human-altered sagebrush steppe

    USGS Publications Warehouse

    Coates, Peter S.; Howe, Kristy B.; Casazza, Michael L.; Delehanty, David J.

    2014-01-01

    Energy-related infrastructure and other human enterprises within sagebrush steppe of the American West often results in changes that promote common raven (Corvus corax; hereafter, raven) populations. Ravens, a generalist predator capable of behavioral innovation, present a threat to many species of conservation concern. We evaluate the effects of detailed features of an altered landscape on the probability of raven occurrence using extensive raven survey (n= 1045) and mapping data from southern Idaho, USA. We found nonlinear relationships between raven occurrence and distances to transmission lines, roads, and facilities. Most importantly, raven occurrence was greater with presence of transmission lines up to 2.2 km from the corridor.We further explain variation in raven occurrence along anthropogenic features based on the amount of non-native vegetation and cover type edge, such that ravens select fragmented sagebrush stands with patchy, exotic vegetative introgression. Raven occurrence also increased with greater length of edge formed by the contact of big sagebrush (Artemisia tridentate spp.) with non-native vegetation cover types. In consideration of increasing alteration of sagebrush steppe, these findings will be useful for planning energy transmission corridor placement and other management activities where conservation of sagebrush obligate species is a priority.

  18. The Co-Occurrence of Quotatives with Mimetic Performances.

    ERIC Educational Resources Information Center

    Buchstaller, Isabelle

    2003-01-01

    This paper discusses mimesis, the direct representation and total imitation of an event. It studies the co-occurrence of quotative verbs with mimetic enactment based on two corpora of U.S. American English, both available through the University of Pennsylvania Data Consortium. The Switchboard Corpus has 542 speakers ranging in age from 20-60 years…

  19. Environment-related and host-related factors affecting the occurrence of lice on rodents in Central Europe.

    PubMed

    Stanko, Michal; Fričová, Jana; Miklisová, Dana; Khokhlova, Irina S; Krasnov, Boris R

    2015-06-01

    We studied the effects of environment- (habitat, season) and host-related (sex, body mass) factors on the occurrence of four species of lice (Insecta:Phthiraptera:Anoplura) on six rodent species (Rodentia:Muridae). We asked how these factors influence the occurrence of lice on an individual host and whether different rodent-louse associations demonstrate consistent trends in these effects. We found significant effects of at least one environment-related and at least one host-related factor on the louse occurrence in five of six host-louse associations. The effect of habitat was significant in two associations with the occurrence of lice being more frequent in lowland than in mountain habitats. The effect of season was significant in five associations with a higher occurrence of infestation during the warm season in four associations and the cold season in one association. Host sex affected significantly the infestation by lice in three associations with a higher frequency of infestation in males. Host body mass affected the occurrence of lice in all five associations, being negative in wood mice and positive in voles. In conclusion, lice were influenced not only by the host- but also by environment-related factors. The effects of the latter could be mediated via life history parameters of a host.

  20. Crisis occurrence and resolution in patients with severe and persistent mental illness: the contribution of suicidality.

    PubMed

    Links, Paul S; Eynan, Rahel; Ball, Jeffrey S; Barr, Aiala; Rourke, Sean

    2005-01-01

    Assertive community treatment appears to have limited impact on the risk of suicide in persons with severe and persistent mental illness (SPMI). This exploratory prospective study attempts to understand this observation by studying the contribution of suicidality to the occurrence of crisis events in patients with SPMI. Specifically, an observer-rated measure of the need for hospitalization, the Crisis Triage Rating Scale, was completed at baseline, crisis occurrence, and resolution to determine how much the level of suicidality contributed to the deemed level of crisis. Second, observer-ratings of suicidal ideation, the Modified Scale for Suicide Ideation, and psychopathology and suicidality, Brief Psychiatric Rating Scale, were measured at baseline, crisis occurrence, and resolution. A self-report measure of distress, the Symptom Distress Scale, was completed at baseline, crisis occurrence, and resolution. Finally, the patients' crisis experiences were recorded qualitatively to compare with quantitative measures of suicidality. Almost 40% of the subjects experienced crisis events and more than a quarter of these events were judged to be severe enough to warrant the need for hospitalization. Our findings suggest that elevation of psychiatric symptoms is a major contributor to the crisis occurrences of individuals with SPMI; although the risk of suicide may have to be conceived as somewhat separate from crisis occurrence.

  1. Global occurrences of gas hydrate

    USGS Publications Warehouse

    Kvenvolden, K.A.; Lorenson, T.D.

    2001-01-01

    Natural gas hydrate is found worldwide in sediments of outer continental margins of all oceans and in polar areas with continuous permafrost. There are currently 77 localities identified globally where geophysical, geochemical and/or geological evidence indicates the presence of gas hydrate. Details concerning individual gas-hydrate occurrences are compiled at a new world-wide-web (www) site (http://walrus.wr.usgs.gov/globalhydrate). This site has been created to facilitate global gas-hydrate research by providing information on each of the localities where there is evidence for gas hydrate. Also considered are the implications of gas hydrate as a potential (1) energy resource, (2) factor in global climate change, and (3) geohazard.

  2. Tectonically Induced Anomalies Without Large Earthquake Occurrences

    NASA Astrophysics Data System (ADS)

    Shi, Zheming; Wang, Guangcai; Liu, Chenglong; Che, Yongtai

    2017-06-01

    In this study, we documented a case involving large-scale macroscopic anomalies in the Xichang area, southwestern Sichuan Province, China, from May to June of 2002, after which no major earthquake occurred. During our field survey in 2002, we found that the timing of the high-frequency occurrence of groundwater anomalies was in good agreement with those of animal anomalies. Spatially, the groundwater and animal anomalies were distributed along the Anninghe-Zemuhe fault zone. Furthermore, the groundwater level was elevated in the northwest part of the Zemuhe fault and depressed in the southeast part of the Zemuhe fault zone, with a border somewhere between Puge and Ningnan Counties. Combined with microscopic groundwater, geodetic and seismic activity data, we infer that the anomalies in the Xichang area were the result of increasing tectonic activity in the Sichuan-Yunnan block. In addition, groundwater data may be used as a good indicator of tectonic activity. This case tells us that there is no direct relationship between an earthquake and these anomalies. In most cases, the vast majority of the anomalies, including microscopic and macroscopic anomalies, are caused by tectonic activity. That is, these anomalies could occur under the effects of tectonic activity, but they do not necessarily relate to the occurrence of earthquakes.

  3. Co-occurrence frequency evaluated with large language corpora boosts semantic priming effects.

    PubMed

    Brunellière, Angèle; Perre, Laetitia; Tran, ThiMai; Bonnotte, Isabelle

    2017-09-01

    In recent decades, many computational techniques have been developed to analyse the contextual usage of words in large language corpora. The present study examined whether the co-occurrence frequency obtained from large language corpora might boost purely semantic priming effects. Two experiments were conducted: one with conscious semantic priming, the other with subliminal semantic priming. Both experiments contrasted three semantic priming contexts: an unrelated priming context and two related priming contexts with word pairs that are semantically related and that co-occur either frequently or infrequently. In the conscious priming presentation (166-ms stimulus-onset asynchrony, SOA), a semantic priming effect was recorded in both related priming contexts, which was greater with higher co-occurrence frequency. In the subliminal priming presentation (66-ms SOA), no significant priming effect was shown, regardless of the related priming context. These results show that co-occurrence frequency boosts pure semantic priming effects and are discussed with reference to models of semantic network.

  4. A survey of the occurrence of motion sickness amongst passengers at sea.

    PubMed

    Lawther, A; Griffin, M J

    1988-05-01

    A questionnaire survey of motion sickness occurrence on board passenger ferries has been conducted. Data were collected from 20,029 passengers on 114 voyages on 9 vessels: 6 ships, 2 hovercraft, and 1 jetfoil. Information was obtained about feelings of illness, the occurrence of vomiting, the taking of anti-seasickness tablets, the consumption of alcoholic drinks, regularity of travel by sea, age, and sex. Overall, 7% of passengers reported vomiting at some time during the journey, 21% said they felt "slightly unwell," 4% felt "quite ill," and a further 4% felt "absolutely dreadful." Both vomiting incidence and illness rating were greater in females than in males, and there was a slight decrease in sickness occurrence with increasing age. The incidence of vomiting was related to the taking of tablets and the drinking of alcohol; there were also some interaction effects with other variables. Anecdotal information from passengers is reported and consideration is given to the effects of environmental variables.

  5. 21 CFR 1002.20 - Reporting of accidental radiation occurrences.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... the Director, Center for Devices and Radiological Health, all accidental radiation occurrences... grounds include, but are not necessarily limited to, professional, scientific, or medical facts or... occurred. (b) Such reports shall be addressed to the Center for Devices and Radiological Health, ATTN...

  6. 21 CFR 1002.20 - Reporting of accidental radiation occurrences.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... the Director, Center for Devices and Radiological Health, all accidental radiation occurrences... grounds include, but are not necessarily limited to, professional, scientific, or medical facts or... occurred. (b) Such reports shall be addressed to Food and Drug Administration, Center for Devices and...

  7. OCCURRENCE OF PATHOGENS IN DISTRIBUTION AND MARKETING MUNICIPAL SLUDGES

    EPA Science Inventory

    A study of the occurrence of indicator and pathogenic microorganisms in distributed and marketed municipal sewage sludges was conducted. Samples were analyzed for a variety of bacteria, viruses, parasites, and fungi. In the first part of the study, seven municipal sewage sludge c...

  8. OCCURRENCE OF INTRINSIC VANCOMYCIN RESISTANT ENTEROCOCCI IN ANIMAL FECES

    EPA Science Inventory

    A survey was conducted to determine the occurrence of vancomycin resistant enterococci (VRE) in animal and human fecal samples. Fecal samples from 14 animal species and humans were analyzed by quantitative culture for enterococci and VRE. Over 800 VRE isolates were characterize...

  9. Occurrence and pathogenicity of Naegleria fowleri in artificially heated waters.

    PubMed Central

    Sykora, J L; Keleti, G; Martinez, A J

    1983-01-01

    The occurrence of pathogenic Naegleria fowleri in thermal discharges, recipient waters, and cooling towers of eight power plants located in western Pennsylvania was investigated for 2 years in conjunction with several environmental measurements. Pathogenic N. fowleri was detected in one cooling tower and in the discharge, receiving waters, or both of five of eight localities. The occurrence of this organism was related to elevated temperatures, but no significant correlation was found for other biological and chemical parameters. Laboratory experiments on the effect of pH on pathogenic N. fowleri documented 100% survival at a range from 2.1 to 8.15. Higher pH reduced or killed the amoebae. No case of human primary amoebic meningoencephalitis occurred during the study. PMID:6847189

  10. Occurrence and pathogenicity of Naegleria fowleri in artificially heated waters

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sykora, J.L.; Keleti, G.; Martinez, A.J.

    1983-03-01

    The occurrence of pathogenic Naegleria fowleri in thermal discharges, recipient waters, and cooling towers of eight power plants located in western Pennsylvania was investigated for 2 years in conjunction with several environmental measurements. Pathogenic N. fowleri was detected in one cooling tower and in the discharge, receiving waters, or both of five of eight localities. The occurrence of this organism was related to elevated temperatures, but no significant correlation was found for other biological and chemical parameters. Laboratory experiments on the effect of pH on pathogenic N. fowleri documented 100% survival at a range from 2.1 to 8.15. Higher pHmore » reduced or killed the amoebae. No case of human primary amoebic meningoencephalitis occurred during the study.« less

  11. Preliminary digital map of cryptocrystalline occurrences in northern Nevada

    USGS Publications Warehouse

    Moyer, Lorre A.

    1999-01-01

    The purpose was to identify potential cryptocrystalline material sources for tools used by indigenous people of the northern Nevada portion of the Great Basin. Cryptocrystalline occurrence data combed from the U.S. Geological Survey's Mineral Resources Data System (MRDS, 1995) were combined with sites described in Nevada rockhound guides and entered into a geographic information system (GIS). The map area encompasses northern Nevada (fig.1). This open-file report describes the methods used to convert cryptocrystalline occurrence data into a digital format, documents the file structures, and explains how to download the digital files from the U.S. Geological Survey's World Wide Web site. Uses of the spatial dataset include, but are not limited to, natural and cultural resource management, interdisciplinary activities, recreational rockhounding, and gold exploration. It is important to note that the accuracy of the spatial data varies widely, and for some purposes, field checks are advised.

  12. Familial occurrence of cerebral gigantism, Sotos' syndrome.

    PubMed

    Hansen, F J; Friis, B

    1976-05-01

    Since the original description of cerebral gigantism, about 85 cases have been reported. Four papers comment on familial occurrence but never in parents and their children. This paper describes the syndrome in a mother and her child, which, together with facts pointing towards prenatal etiology, such as excessive birthweight, striking mutual resemblance and abnormal dermatoglyphics, points to a genetic defect. Previous endocrine studies are enlarged by the findings of normal serum somatomedin and serum prolactin.

  13. Evaluating complementary networks of restoration plantings for landscape-scale occurrence of temporally dynamic species.

    PubMed

    Ikin, Karen; Tulloch, Ayesha; Gibbons, Philip; Ansell, Dean; Seddon, Julian; Lindenmayer, David

    2016-10-01

    Multibillion dollar investments in land restoration make it critical that conservation goals are achieved cost-effectively. Approaches developed for systematic conservation planning offer opportunities to evaluate landscape-scale, temporally dynamic biodiversity outcomes from restoration and improve on traditional approaches that focus on the most species-rich plantings. We investigated whether it is possible to apply a complementarity-based approach to evaluate the extent to which an existing network of restoration plantings meets representation targets. Using a case study of woodland birds of conservation concern in southeastern Australia, we compared complementarity-based selections of plantings based on temporally dynamic species occurrences with selections based on static species occurrences and selections based on ranking plantings by species richness. The dynamic complementarity approach, which incorporated species occurrences over 5 years, resulted in higher species occurrences and proportion of targets met compared with the static complementarity approach, in which species occurrences were taken at a single point in time. For equivalent cost, the dynamic complementarity approach also always resulted in higher average minimum percent occurrence of species maintained through time and a higher proportion of the bird community meeting representation targets compared with the species-richness approach. Plantings selected under the complementarity approaches represented the full range of planting attributes, whereas those selected under the species-richness approach were larger in size. Our results suggest that future restoration policy should not attempt to achieve all conservation goals within individual plantings, but should instead capitalize on restoration opportunities as they arise to achieve collective value of multiple plantings across the landscape. Networks of restoration plantings with complementary attributes of age, size, vegetation structure, and

  14. Characterization of bacterial coliform occurrences in different zones of a drinking water distribution system.

    PubMed

    Blanch, A R; Galofré, B; Lucena, F; Terradillos, A; Vilanova, X; Ribas, F

    2007-03-01

    To compare the bacterial coliforms detected from occurrences in three zones of a water distribution system supplied by two separate water sources. Conventional and standardized protocols for identifying enterobacterial populations were applied. Additional tests to confirm isolates were included. Analyses of diversity and population similarity were performed using the Phene Plate System, a miniaturized biochemical phenotyping method. Isolates were identified by the API 20E system in tandem with biochemical phenotyping. A total of 16 576 samples were taken from the water distribution system, with 1416 isolates analysed. A low number of coliform occurrences were observed (2%). Escherichia coli was not detected in either water origin or in Zone 2 samples; however, in Zones 1 and 3 a low number of cases of E. coli were recorded. The percentages of E. coli depended on the identification criteria. Eight biochemical profiles for coliform populations were defined according to the results of the confirmative tests. There was a high diversity among these populations in the three zones studied, although no significant variations in their composition (associated with occurrences in the different zones) were observed. Klebsiella oxytoca was the most commonly detected species irrespective of zone, although seven other enterobacterial genera were also found. Analysis of the enzymatic activity of beta-glucuronidase or application of the criteria established in the norm ISO 9308-1, in tandem with thermotolerance was needed to evaluate the occurrence of E. coli in the distribution systems. Detected occurrences of bacterial coliforms could be associated with re-growth patterns for specific sampling points in the distribution system. Seasonal differences, independent of the studied zones, were observed. Biochemical phenotyping of bacterial coliforms was shown to be a useful method on the characterization of occurrences in water distribution systems.

  15. Microrefuges and the occurrence of thermal specialists: implications for wildlife persistence amidst changing temperatures

    USGS Publications Warehouse

    Hall, L. Embere; Chalfoun, Anna D.; Beever, Erik; Loosen, Anne E.

    2016-01-01

    BackgroundContemporary climate change is affecting nearly all biomes, causing shifts in animal distributions, phenology, and persistence. Favorable microclimates may buffer organisms against rapid changes in climate, thereby allowing time for populations to adapt. The degree to which microclimates facilitate the local persistence of climate-sensitive species, however, is largely an open question. We addressed the importance of microrefuges in mammalian thermal specialists, using the American pika (Ochotona princeps) as a model organism. Pikas are sensitive to ambient temperatures, and are active year-round in the alpine where conditions are highly variable. We tested four hypotheses about the relationship between microrefuges and pika occurrence: 1) Local-habitat Hypothesis (local-habitat conditions are paramount, regardless of microrefuge); 2) Surface-temperature Hypothesis (surrounding temperatures, unmoderated by microrefuge, best predict occurrence); 3) Interstitial-temperature Hypothesis (temperatures within microrefuges best predict occurrence), and 4) Microrefuge Hypothesis (the degree to which microrefuges moderate the surrounding temperature facilitates occurrence, regardless of other habitat characteristics). We examined pika occurrence at 146 sites across an elevational gradient. We quantified pika presence, physiographic habitat characteristics and forage availability at each site, and deployed paired temperature loggers at a subset of sites to measure surface and subterranean temperatures.ResultsWe found strong support for the Microrefuge Hypothesis. Pikas were more likely to occur at sites where the subsurface environment substantially moderated surface temperatures, especially during the warm season. Microrefugium was the strongest predictor of pika occurrence, independent of other critical habitat characteristics, such as forage availability.ConclusionsBy modulating surface temperatures, microrefuges may strongly influence where temperature

  16. Occurrences of uranium-bearing minerals in the St. Kevin District, Lake County, Colorado

    USGS Publications Warehouse

    Pierson, C.T.; Singewald, Q.D.

    1953-01-01

    None of the uranium occurrences are of commercial importance. They are for the most part in non-glaciated terrane, which has been subjected to a very long period of weathering.  Thus, chemical leaching within the zone of weathering may have greatly reduced the uranium content of material near the surface, and occurrences of even small quantities of secondary uranium minerals might be related to stronger, primary concentrations at depth.

  17. Species traits and catchment-scale habitat factors influence the occurrence of freshwater mussel populations and assemblages

    USGS Publications Warehouse

    Pandolfo, Tamara J.; Kwak, Thomas J.; Cope, W. Gregory; Heise, Ryan J.; Nichols, Robert B.; Pacifici, Krishna

    2016-01-01

    Conservation of freshwater unionid mussels presents unique challenges due to their distinctive life cycle, cryptic occurrence and imperilled status. Relevant ecological information is urgently needed to guide their management and conservation.We adopted a modelling approach, which is a novel application to freshwater mussels to enhance inference on rare species, by borrowing data among species in a hierarchical framework to conduct the most comprehensive occurrence analysis for freshwater mussels to date. We incorporated imperfect detection to more accurately examine effects of biotic and abiotic factors at multiple scales on the occurrence of 14 mussel species and the entire assemblage of the Tar River Basin of North Carolina, U.S.A.The single assemblage estimate of detection probability for all species was 0.42 (95% CI, 0.36–0.47) with no species- or site-specific detection effects identified. We empirically observed 15 mussel species in the basin but estimated total species richness at 21 (95% CI, 16–24) when accounting for imperfect detection.Mean occurrence probability among species ranged from 0.04 (95% CI, 0.01–0.16) for Alasmidonta undulata, an undescribed Lampsilis sp., and Strophitus undulatus to 0.67 (95% CI, 0.42–0.86) for Elliptio icterina. Median occurrence probability among sites was <0.30 for all species with the exception of E. icterina. Site occurrence probability generally related to mussel conservation status, with reduced occurrence for endangered and threatened species.Catchment-scale abiotic variables (stream power, agricultural land use) and species traits (brood time, host specificity, tribe) influenced the occurrence of mussel assemblages more than reach- or microhabitat-scale features.Our findings reflect the complexity of mussel ecology and indicate that habitat restoration alone may not be adequate for mussel conservation. Catchment-scale management can benefit an entire assemblage, but species-specific strategies may be

  18. Occurrence of chloromethane in tropical terrestrial and marine areas

    NASA Astrophysics Data System (ADS)

    Laturnus, F.; Kolusu, S.; Grawe, D.; Mehlig, U.; Asp, N.; Schlünzen, K. H.; Seifert, R.

    2011-12-01

    The discussion of a possible global climate change induced by human activities brought sources into focus not yet considered to be important in global climate changes. One source is the natural emission of chloromethane, a compound which is known to participate in atmospheric processes affecting the global climate, such as stratospheric ozone destruction and warming of the troposphere. Especially natural emissions of chloromethane have been under scrutiny recently as the part of the natural contribution is still unknown and may be influenced by human activities. A comparison between global atmospheric occurrence of chloromethane and their input from so far known industrial and natural sources revealed a gap of 40-50% in missing input. Recently, it has been suggested that tropical areas may be the missing link in filling the gap of the atmospheric input of chloromethane. In our studies, we investigated tropical oceanic areas and mangrove forests regarding their occurrence and emission of chloromethane. For the oceanic areas, ambient air concentrations and stable carbon rations were taken. Together with backward air mass trajectory analysis the results revealed a coastal influence on the occurrence of chloromethane in the tropical ocean. For the mangrove forest areas, ambient air concentrations and stable carbon rations were taken at upwind and downwind position at the coast of Brazil. The results showed a considerable natural emission of chloromethane suggesting mangroves as an important source for the atmospheric input of chloromethane. With the help of a mesoscale atmospheric model meteorological conditions were simulated and the fluxes of chloromethane from mangrove forest were estimated.

  19. Age and gender differences in conviction and crash occurrence subsequent to being directed to Iowa's driver improvement program.

    PubMed

    Zhang, Wei; Gkritza, Konstantina; Keren, Nir; Nambisan, Shashi

    2011-10-01

    This paper investigates potential gender and age differences in conviction and crash occurrence subsequent to being directed to attend Iowa's Driver Improvement Program (DIP). Binary logit models were developed to investigate the factors that influence conviction occurrence after DIP by gender and age. Because of the low crash occurrence subsequent to DIP, association rules were applied to investigate the factors that influence crash occurrence subsequent to DIP, in lieu of econometric models. There were statistical significant differences by driver gender, age, and conviction history in the likelihood of subsequent convictions. However, this paper found no association between DIP outcome, crash history, and crash occurrence. Evaluating the differences in conviction and crash occurrence subsequent to DIP between female and male drivers, and among different age groups can lead to improvements of the effectiveness of DIPs and help to identify low-cost intervention measures, customized based on drivers' gender and age, for improving driving behaviors. Copyright © 2011 National Safety Council and Elsevier Ltd. All rights reserved.

  20. Dynamic burstiness of word-occurrence and network modularity in textbook systems

    NASA Astrophysics Data System (ADS)

    Cui, Xue-Mei; Yoon, Chang No; Youn, Hyejin; Lee, Sang Hoon; Jung, Jean S.; Han, Seung Kee

    2017-12-01

    We show that the dynamic burstiness of word occurrence in textbook systems is attributed to the modularity of the word association networks. At first, a measure of dynamic burstiness is introduced to quantify burstiness of word occurrence in a textbook. The advantage of this measure is that the dynamic burstiness is decomposable into two contributions: one coming from the inter-event variance and the other from the memory effects. Comparing network structures of physics textbook systems with those of surrogate random textbooks without the memory or variance effects are absent, we show that the network modularity increases systematically with the dynamic burstiness. The intra-connectivity of individual word representing the strength of a tie with which a node is bound to a module accordingly increases with the dynamic burstiness, suggesting individual words with high burstiness are strongly bound to one module. Based on the frequency and dynamic burstiness, physics terminology is classified into four categories: fundamental words, topical words, special words, and common words. In addition, we test the correlation between the dynamic burstiness of word occurrence and network modularity using a two-state model of burst generation.

  1. Predicting the occurrence of wildfires with binary structured additive regression models.

    PubMed

    Ríos-Pena, Laura; Kneib, Thomas; Cadarso-Suárez, Carmen; Marey-Pérez, Manuel

    2017-02-01

    Wildfires are one of the main environmental problems facing societies today, and in the case of Galicia (north-west Spain), they are the main cause of forest destruction. This paper used binary structured additive regression (STAR) for modelling the occurrence of wildfires in Galicia. Binary STAR models are a recent contribution to the classical logistic regression and binary generalized additive models. Their main advantage lies in their flexibility for modelling non-linear effects, while simultaneously incorporating spatial and temporal variables directly, thereby making it possible to reveal possible relationships among the variables considered. The results showed that the occurrence of wildfires depends on many covariates which display variable behaviour across space and time, and which largely determine the likelihood of ignition of a fire. The joint possibility of working on spatial scales with a resolution of 1 × 1 km cells and mapping predictions in a colour range makes STAR models a useful tool for plotting and predicting wildfire occurrence. Lastly, it will facilitate the development of fire behaviour models, which can be invaluable when it comes to drawing up fire-prevention and firefighting plans. Copyright © 2016 Elsevier Ltd. All rights reserved.

  2. The occurrence of immune priming can be species-specific in entomopathogens.

    PubMed

    Medina Gomez, Héctor; Adame Rivas, Galia; Hernández-Quintero, Angélica; González Hernández, Angélica; Torres Guzmán, Juan Carlos; Mendoza, Humberto Lanz; Contreras-Garduño, Jorge

    2018-05-01

    Immune priming in invertebrates refers to an improved immune response (and therefore a better chance of survival) upon a second encounter with a specific pathogen. Although the existence of immune priming has been evaluated in invertebrate hosts, the ability of a particular entomopathogen species or strain to influence the occurrence of immune priming has not been thoroughly evaluated. The aim of the current study was to compare the occurrence of immune priming in Tenebrio molitor larvae after homologous challenges (a dual exposure to similar entomopathogens) with Serratia marcescens, Bacillus thuringiensis and Metarhizium anisopliae. Larvae presented more effective immune priming (measured as survival rates) when exposed to M. anisopliae or B. thuringiensis than when exposed to S. marcescens. We hypothesize that the toll pathway may help T. molitor survive these enemies and that the IMD pathway may be expressed to a lesser degree in this species, which may explain why they succumb to Gram-negative bacteria. This and other recent evidence suggest that the occurrence of immune priming in these organisms must not be ruled out until this phenomenon is tested with different entomopathogens. Copyright © 2018 Elsevier Ltd. All rights reserved.

  3. OCCURRENCE OF A NEW GENERATION OF DISINFECTION BY-PRODUCTS

    EPA Science Inventory

    A survey of disinfection by-product (DBP) occurrence in the United States was conducted at 12 drinking water treatment plants. In addition to currently regulated DBPs, more than 50 DBPs that rated a high priority for potential toxicity were studied. These priority DBPs included...

  4. Population trends and habitat occurrence of forest birds on southern national forests, 1992-2004

    Treesearch

    Frank A. La Sorte; Frank R., III Thompson; Margaret K. Trani; Timothy J. Mersmann

    2007-01-01

    We determined population trends and habitat occurrences for bird species in 14 national forests located in the Southern Region from 1992-2004. We estimated population trends for 144 species within: 14 national forests, 10 physiographic areas, and in the Southern Region as a whole. Habitat occurrences were estimated for 114 species based on 13 forest types and four...

  5. Radioactive occurrences in veins and igneous and metamorphic rocks of New Mexico with annotated bibliography. [Over 600 citations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McLemore, V. T.

    1982-01-01

    From an extensive literature search and field examination of 96 nonsandstone radioactive occurrences, the author compiled an annotated bibliography of over 600 citations and a list of 327 radioactive occurrences in veins and igneous and metamorphic rocks of New Mexico. The citations are indexed by individual radioactive occurrence, geographic area, county, fluorspar deposits and occurrences, geochemical analyses, and geologic maps. In addition, the geology, mineralization, and uranium and thorium potential of 41 geographic areas in New Mexico containing known radioactive occurrences in veins and igneous and metamorphic rocks or that contain host rocks considered favorable for uranium or thorium mineralizationmore » are summarized. A list of aerial-radiometric, magnetic, hydrogeochemical, and stream-sediment survey reports is included.« less

  6. Thinking critically about the occurrence of widespread participation in poor nursing care.

    PubMed

    Roberts, Marc; Ion, Robin

    2015-04-01

    A discussion of how Arendt's work can be productively re-contextualized to provide a critical analysis of the occurrence of widespread participation in poor nursing care and what the implications of this are for the providers of nursing education. While the recent participation of nurses in healthcare failings, such as that detailed in the Francis report, has been universally condemned, there has been an absence of critical analyses in the literature that attempt to understand the occurrence of such widespread participation in poor nursing care. This is a significant omission in so far as such analyses will form an integral part of the strategy to limit the occurrence of such widespread participation of nurses in future healthcare failings. Discussion paper. Arendt's 'Eichmann in Jerusalem: A Report on the Banality of Evil' and 'Thinking and Moral Considerations: A Lecture'. In addition, a literature search was conducted and articles published in English relating to the terms care, compassion, ethics, judgement and thinking between 2004-2014 were included. It is anticipated that this discussion will stimulate further critical debate about the role of Arendt's work for an understanding of the occurrence of poor nursing care, and encouraging additional detailed analyses of the widespread participation of nurses in healthcare failings more generally. This article provides a challenging analysis of the widespread participation of nurses in poor care and discusses the opportunities confronting the providers of nursing education in limiting future healthcare failings. © 2014 John Wiley & Sons Ltd.

  7. Health risk factors as predictors of workers' compensation claim occurrence and cost.

    PubMed

    Schwatka, Natalie V; Atherly, Adam; Dally, Miranda J; Fang, Hai; vS Brockbank, Claire; Tenney, Liliana; Goetzel, Ron Z; Jinnett, Kimberly; Witter, Roxana; Reynolds, Stephen; McMillen, James; Newman, Lee S

    2017-01-01

    The objective of this study was to examine the predictive relationships between employee health risk factors (HRFs) and workers' compensation (WC) claim occurrence and costs. Logistic regression and generalised linear models were used to estimate the predictive association between HRFs and claim occurrence and cost among a cohort of 16 926 employees from 314 large, medium and small businesses across multiple industries. First, unadjusted (HRFs only) models were estimated, and second, adjusted (HRFs plus demographic and work organisation variables) were estimated. Unadjusted models demonstrated that several HRFs were predictive of WC claim occurrence and cost. After adjusting for demographic and work organisation differences between employees, many of the relationships previously established did not achieve statistical significance. Stress was the only HRF to display a consistent relationship with claim occurrence, though the type of stress mattered. Stress at work was marginally predictive of a higher odds of incurring a WC claim (p<0.10). Stress at home and stress over finances were predictive of higher and lower costs of claims, respectively (p<0.05). The unadjusted model results indicate that HRFs are predictive of future WC claims. However, the disparate findings between unadjusted and adjusted models indicate that future research is needed to examine the multilevel relationship between employee demographics, organisational factors, HRFs and WC claims. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

  8. The Co-Occurrence of Reading Disorder and ADHD: Epidemiology, Treatment, Psychosocial Impact, and Economic Burden

    ERIC Educational Resources Information Center

    Sexton, Chris C.; Gelhorn, Heather L.; Bell, Jill A.; Classi, Peter M.

    2012-01-01

    The co-occurrence of reading disorder (RD) and attention-deficit/hyperactivity disorder (ADHD) has received increasing attention. This review summarizes the epidemiology, treatment strategies, psychosocial impact, and economic burden associated with the co-occurrence of these conditions. Common genetic and neuropsychological deficits may partially…

  9. Frequent occurrence of nonprimate hepacivirus infections in Thoroughbred breeding horses - A cross-sectional study for the occurrence of infections and potential risk factors.

    PubMed

    Reichert, Claudia; Campe, Amely; Walter, Stephanie; Pfaender, Stephanie; Welsch, Kathrin; Ruddat, Inga; Sieme, Harald; Feige, Karsten; Steinmann, Eike; Cavalleri, Jessika M V

    2017-05-01

    Recently, several new hepaciviruses have been identified of which the nonprimate hepacivirus (NPHV) - the closest relative to hepatitis C virus (HCV) discovered to date - is highly prevalent in horses. However, potential risk factors for the transmission of NPHV among horses remain still unknown. Therefore, the objective of this study was to investigate the occurrence of NPHV infections in Thoroughbreds in northern and western Germany and to identify potential risk factors associated with NPHV infections. Using a cross-sectional study design, a total of 733 serum samples from Thoroughbred broodmares and stallions from northern and western Germany were analyzed for the presence of anti-NPHV nonstructural protein 3 (NS3) antibodies and NPHV RNA using the luciferase immunoprecipitation system (LIPS) and a quantitative real-time PCR, respectively. Information regarding signalment, stud farm, breeding history and international transportation history of each horse were collected and evaluated. A frequent occurrence of NPHV was found in the study population with 453 seropositive horses (61.8%) and 134 horses (18.3%) carrying NPHV RNA. Furthermore, statistical analysis revealed that the probability of being infected decreased for horses with a transportation history with increasing age by 20% each year. For horses that stayed in Germany no association between age and infection could be observed. In conclusion, the high occurrence of NPHV infections in breeding Thoroughbreds suggests circulating NPHV infections, endemic herds or persistent shedding in these animals and revealed the association of age and international transportation as risk factor for NPHV infections. Copyright © 2017 Elsevier B.V. All rights reserved.

  10. Implementation of a protocol to reduce occurrence of retained sponges after vaginal delivery.

    PubMed

    Lutgendorf, Monica A; Schindler, Lynnett L; Hill, James B; Magann, Everett F; O'Boyle, John D

    2011-06-01

    Retained sponges (gossypiboma) following vaginal delivery are an uncommon occurrence. Although significant morbidity from such an event is unlikely, there are many reported adverse effects, including symptoms of malodorous discharge, loss of confidence in providers and the medical system, and legal claims. To report a protocol intended to reduce the occurrence of retained sponges following vaginal delivery. After identification of limitations with existing delivery room protocols, we developed a sponge count protocol to reduce occurrence of retained vaginal sponges. We report our experience at Naval Medical Center Portsmouth, a large tertiary care military treatment facility with our efforts to implement a sponge count protocol to reduce retained sponges following vaginal delivery. With appropriate pre-implementation training, protocols which incorporate post-delivery vaginal sweep and sponge counts are well accepted by the health care team and can be incorporated into the delivery room routine.

  11. Workplace social capital and co-occurrence of lifestyle risk factors: the Finnish Public Sector Study.

    PubMed

    Väänänen, A; Kouvonen, A; Kivimäki, M; Oksanen, T; Elovainio, M; Virtanen, M; Pentti, J; Vahtera, J

    2009-07-01

    The aim of this prospective study was to examine the link between individual and ecological workplace social capital and the co-occurrence of adverse lifestyle risk factors such as smoking, heavy drinking, physical inactivity and overweight. Data on 25 897 female and 5476 male public sector employees were analysed. Questionnaire surveys conducted in 2000-2002 (baseline) and 2004-2005 (follow-up) were used to assess workplace social capital, lifestyle risk factors and other characteristics. Multilevel multinomial logistic regression analysis was used to examine associations between individual and ecological social capital and the co-occurrence of lifestyle risk factors. In the cross-sectional analysis adjusted for age, sex, marital status and employer, low social capital at work at both the individual and ecological level was associated with at least a 1.3 times higher odds of having more than two lifestyle risk factors versus having no risk factors. Similar associations were found in the prospective setting. However, additional adjustment for the co-occurrence of risk factors and socioeconomic status at baseline attenuated the result to non-significant. Social capital at work seems to be associated with a lowered risk of co-occurrence of multiple lifestyle risk factors but does not clearly predict the future risk of this co-occurrence.

  12. Do gravity waves significantly impact PSC occurrence in the Antarctic?

    NASA Astrophysics Data System (ADS)

    McDonald, A. J.; George, S. E.; Woollands, R. M.

    2009-02-01

    This study uses a combination of POAM III aerosol extinction measurements and CHAMP GPS/RO temperature measurements to examine the role of atmospheric gravity waves in Polar Stratospheric Cloud (PSC) formation in the Antarctic. POAM III aerosol extinction observations are used to identify Type I Polar Stratospheric Clouds using an unsupervised clustering algorithm. The seasonal and spatial distribution of PSCs observed by POAM III is examined to determine whether there is a bias towards regions of high wave activity early in the Antarctic winter which may enhance PSC formation. Examination of the probability of temperatures below the Type Ia formation temperature threshold based on UKMO analyses displays a good correspondence to the PSC occurrence derived from POAM III extinction data in general. However, in June the POAM III observations of PSC are more abundant than expected from temperature thresholds. In addition the PSC occurrence based on temperature thresholds in September and October is often significantly higher than the PSC occurrence observed by POAM III, this observation probably being due to dehydration and denitrification. Use of high resolution temperatures from CHAMP GPS/RO observations provide a slightly improved relationship to the POAM III derived values. Analysis of the CHAMP temperature observations indicates that temperature perturbations associated with gravity waves may explain the enhanced PSC incidence observed in June compared to the UKMO analyses. Comparison of the UKMO analyses temperatures relative to corresponding CHAMP observations also suggests a small warm bias in the UKMO analyses during June. Examination of the longitudinal structure PSC occurrence in June 2005 also shows that regions of enhancement are associated with data near the Antarctic peninsula a known Mountain wave "hotspot". The impact of temperature perturbations causing enhanced temperature threshold crossings is shown to be particularly important early in the

  13. Occurrence of Dendrocephalus brasiliensis Pesta, 1921 (Crustacea, Anostraca) in the Caras river, southern Ceara, Brazil.

    PubMed

    Freita, Francisco R V; Lucena, Isis C DE; Alencar, Damares R; Santos, Israel J M; Pinheiro, Allysson P

    2017-01-01

    Occurrence of Dendrocephalus brasiliensis Pesta, 1921 (Crustacea, Anostraca) in the Caras river, southern Ceara, Brazil. The specimens were collected in March and April 2014. The new occurrence extends the distribution and update area of occupancy of the species, which is characterized by a specific habitat: temporary lakes.

  14. Co-occurrence of carbohydrate malabsorption and primary epiploic appendagitis

    PubMed Central

    Schnedl, Wolfgang J; Kalmar, Peter; Mangge, Harald; Krause, Robert; Wallner-Liebmann, Sandra J

    2015-01-01

    Unspecific abdominal complaints including bloating and irregular bowel movements may be caused by carbohydrate malabsorption syndromes, e.g., lactose and fructose malabsorption. These symptoms were investigated with hydrogen (H2) breath tests and correlated to carbohydrate malabsorption. During performing these H2-breath tests the patient presented with an acute, localized, non-migratory pain in the left lower abdominal quadrant. Primary epiploic appendagitis is a rare cause of abdominal acute or subacute complaints and diagnosis of primary epiploic appendagitis (PEA) is made when computed tomography reveals a characteristic lesion. We report on a patient with co-occurrence of lactose and fructose malabsorption, which was treated successfully with a diet free of culprit carbohydrates, with PEA recovering without medication or surgical treatment within few days. Since the abdominal unspecific symptoms had been present for months, they appeared not to be correlated to the acute localized abdominal pain, therefore we speculate on a random co-occurrence of combined carbohydrate malabsorption and PEA. PMID:26401090

  15. Climatic factors influencing triatomine occurrence in Central-West Brazil

    PubMed Central

    Pereira, Joyce Mendes; de Almeida, Paulo Silva; de Sousa, Adair Vieira; de Paula, Aécio Moraes; Machado, Ricardo Bomfim; Gurgel-Gonçalves, Rodrigo

    2013-01-01

    We estimated the geographic distributions of triatomine species in Central-West Region of Brazil (CW) and analysed the climatic factors influencing their occurrence. A total of 3,396 records of 27 triatomine species were analysed. Using the maximum entropy method, ecological niche models were produced for eight species occurring in at least 20 municipalities based on 13 climatic variables and elevation. Triatoma sordida and Rhodnius neglectus were the species with the broadest geographic distributions in CW Brazil. The Cerrado areas in the state of Goiás were found to be more suitable for the occurrence of synanthropic triatomines than the Amazon forest areas in the northern part of the state of Mato Grosso. The variable that best explains the evaluated models is temperature seasonality. The results indicate that almost the entire region presents climatic conditions that are appropriate for at least one triatomine species. Therefore, it is recommended that entomological surveillance be reinforced in CW Brazil. PMID:23778666

  16. Occurrence and Distribution of Microcystins in Lake Taihu, China

    PubMed Central

    Sakai, Hiroshi; Hao, Aimin; Iseri, Yasushi; Wang, Song; Kuba, Takahiro; Zhang, Zhenjia; Katayama, Hiroyuki

    2013-01-01

    The occurrence and distribution of microcystins were investigated in Lake Taihu, the third largest lake in China. An extensive survey, larger and broader in scale than previous studies, was conducted in summer 2010. The highest microcystin concentration was found at southern part of Taihu, which was newly included in this survey. In northern coastal areas, total cellular concentrations of 20 to 44 μg/L were observed. In northern offshore waters, levels were up to 4.8 μg/L. Microcystin occurrence was highly correlated with chemical oxygen demand, turbidity, and chlorophyll-a. Extracellular/total cellular microcystin (E/T) ratios were calculated and compared to other water quality parameters. A higher correlation was found using E/T ratios than original microcystin values. These results show that algal blooms are having a severe impact on Lake Taihu, and further and extensive monitoring and research are required to suppress blooms effectively. PMID:23853542

  17. PLANET OCCURRENCE WITHIN 0.25 AU OF SOLAR-TYPE STARS FROM KEPLER

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Howard, Andrew W.; Marcy, Geoffrey W.; Bryson, Stephen T.

    We report the distribution of planets as a function of planet radius, orbital period, and stellar effective temperature for orbital periods less than 50 days around solar-type (GK) stars. These results are based on the 1235 planets (formally 'planet candidates') from the Kepler mission that include a nearly complete set of detected planets as small as 2 R{sub Circled-Plus }. For each of the 156,000 target stars, we assess the detectability of planets as a function of planet radius, R{sub p}, and orbital period, P, using a measure of the detection efficiency for each star. We also correct for themore » geometric probability of transit, R{sub *}/a. We consider first Kepler target stars within the 'solar subset' having T{sub eff} = 4100-6100 K, log g 4.0-4.9, and Kepler magnitude Kp < 15 mag, i.e., bright, main-sequence GK stars. We include only those stars having photometric noise low enough to permit detection of planets down to 2 R{sub Circled-Plus }. We count planets in small domains of R{sub p} and P and divide by the included target stars to calculate planet occurrence in each domain. The resulting occurrence of planets varies by more than three orders of magnitude in the radius-orbital period plane and increases substantially down to the smallest radius (2 R{sub Circled-Plus }) and out to the longest orbital period (50 days, {approx}0.25 AU) in our study. For P < 50 days, the distribution of planet radii is given by a power law, df/dlog R = k{sub R}R{sup {alpha}} with k{sub R} = 2.9{sup +0.5}{sub -0.4}, {alpha} = -1.92 {+-} 0.11, and R {identical_to} R{sub p}/R{sub Circled-Plus }. This rapid increase in planet occurrence with decreasing planet size agrees with the prediction of core-accretion formation but disagrees with population synthesis models that predict a desert at super-Earth and Neptune sizes for close-in orbits. Planets with orbital periods shorter than 2 days are extremely rare; for R{sub p} > 2 R{sub Circled-Plus} we measure an occurrence of less

  18. Occurrence detection and selection procedures in healthcare facilities: a comparison across Canada and Brazil.

    PubMed

    Morita, Plinio P; Burns, Catherine M

    2011-01-01

    Healthcare institutions face high levels of risk on a daily basis. Efforts have been made to address these risks and turn this complex environment into a safer environment for patients, staff, and visitors. However, healthcare institutions need more advanced risk management tools to achieve the safety levels currently seen in other industries. One of these potential tools is occurrence investigation systems. In order to be investigated, occurrences must be detected and selected for investigation, since not all institutions have enough resources to investigate all occurrences. A survey was conducted in healthcare institutions in Canada and Brazil to evaluate currently used risk management tools, the difficulties faced, and the possibilities for improvement. The findings include detectability difficulties, lack of resources, lack of support, and insufficient staff involvement.

  19. Time of Occurrence and Duration of Atrial Fibrillation Following Coronary Artery Bypass Grafting.

    PubMed

    Avdic, Sevleta; Osmanovic, Enes; Kadric, Nedzad; Mujanovic, Emir; Ibisevic, Merima; Avdic, Azra

    2016-04-01

    Dilatation of the left atrium and left ventricular diastolic dysfunction (DDLV) according to recent studies has significance in the occurrence of postoperative atrial fibrillation (AF), stroke and death. Authors of some studies found no relationship between these parameters and atrial fibrillation. this study is to determine the time of occurrence and duration of atrial fibrillation in patients after surgical revascularization (CABG) due to the presence of left ventricular diastolic dysfunction and left atrium dilatation and identify the most significant predictors of incident AF. Prospective study included 116 patients undergoing surgical myocardial revascularization followed from admission to discharge. The study was conducted at the Special Hospital "Heart Center BH" Tuzla for a period of one year (March 2011/2012 g.). For all patients was performed preoperative ultrasound examination, especially parameters of diastolic function of the left ventricle and left atrium volume index (LAVi), as the best parameter sized left atrium, and the postoperative occurrence of certain AF and day occurrence, duration in hours, the number of attacks. To assess whether an event occurred or not was used logistic regression, and the effect of time on the event of interest is analyzed by Cox 's regression hazard parallel. 75.9 % of patients had DDLV, and 91.4 % were hypertensives, 12.9 % from the previous stroke (ICV) and 42.2 % diabetics (DM), 14 % with COPD. The average age of patients was 61.41 ± 4.69 years. In both groups was 32.8 % women and 67.2 % men. LAVi preoperative values were significantly higher as DDLV greater degree. In patients with DDLV and higher values LAVi risk of AF is higher, the greater the length of AF and significantly higher number of attacks FA. Early occurrence of atrial fibrillation and its longer duration in function with increasing LAVi a marked increase in the value LAVi have the greatest hazard for the early appearance of atrial fibrillation. As a

  20. Occurrence of trends of weed seed and pathogen contaminants in bentgrass seed lots in Oregon

    USDA-ARS?s Scientific Manuscript database

    Nearly all of the bentgrass seed grown in the United States is produced in Oregon. However, little is known about the occurrence of weed seed or pathogen propagule contaminants in bentgrass seed lots. This study was conducted to assess the diversity and frequency of occurrence of weed seeds, ergot (...

  1. Analysis, Occurrence and Toxicity of Haloacetaldehydes in ...

    EPA Pesticide Factsheets

    Chlorinated and brominated haloacetaldehydes (HALs) are consideredthe 3rd largest class of disinfection by-products (DBPs) by weight. The iodinatedHAL, iodoacetaldehyde, has been recently reported as an emerging DBP infinished drinking waters. Overall, iodinated DBPs, e.g., iodoacetic acids,iodoacetamides, and iodonitriles, are among the most genotoxic of all DBPsidentified. In this context, this chapter reviews the analytical methods available todate to determine HALs in water, and the concentrations at which they are presentin finished drinking waters. Since systematic toxicological effects have been onlyinvestigated for selected chloro- and bromo- HALs, a comparative study of thegenotoxicity and cytotoxicity of this DBP class to mammalian ce11s is alsopresented. This research is part of the Safe and Sustainable Water Research (SSWR) Program, specifically SSWR 2.2.D, which focuses on water contaminants. Haloacetaldehydes are an important class of emerging (non-regulated), disinfection byproducts. Haloacetaldehydes were the third largest disinfection byproduct class by weight in a U.S. Nationwide DBP Occurrence Study. Why was this study done? This study was done because a) improved analytical methods are needed for the haloacetaldehyde disinfection byproducts; b) occurrence data in drinking water are needed; and c) in vitro toxicology data on the class (iodo-, bromo, chloro-) of the haloacetaldehydes are lacking. What is the impact to the scientific field in ge

  2. Credible occurrence probabilities for extreme geophysical events: earthquakes, volcanic eruptions, magnetic storms

    USGS Publications Warehouse

    Love, Jeffrey J.

    2012-01-01

    Statistical analysis is made of rare, extreme geophysical events recorded in historical data -- counting the number of events $k$ with sizes that exceed chosen thresholds during specific durations of time $\\tau$. Under transformations that stabilize data and model-parameter variances, the most likely Poisson-event occurrence rate, $k/\\tau$, applies for frequentist inference and, also, for Bayesian inference with a Jeffreys prior that ensures posterior invariance under changes of variables. Frequentist confidence intervals and Bayesian (Jeffreys) credibility intervals are approximately the same and easy to calculate: $(1/\\tau)[(\\sqrt{k} - z/2)^{2},(\\sqrt{k} + z/2)^{2}]$, where $z$ is a parameter that specifies the width, $z=1$ ($z=2$) corresponding to $1\\sigma$, $68.3\\%$ ($2\\sigma$, $95.4\\%$). If only a few events have been observed, as is usually the case for extreme events, then these "error-bar" intervals might be considered to be relatively wide. From historical records, we estimate most likely long-term occurrence rates, 10-yr occurrence probabilities, and intervals of frequentist confidence and Bayesian credibility for large earthquakes, explosive volcanic eruptions, and magnetic storms.

  3. Spectra of English evolving word co-occurrence networks

    NASA Astrophysics Data System (ADS)

    Liang, Wei

    2017-02-01

    Spectral analysis is a powerful tool that provides global measures of the network properties. In this paper, 200 English articles are collected. A word co-occurrence network is constructed from each single article (denoted by single network). Furthermore, 5 large English word co-occurrence networks are constructed (denoted by large network). Spectra of their adjacency matrices are computed. The largest eigenvalue, λ1, depends on the network size N and the number of edges E as λ1 ∝N0.66 and λ1 ∝E0.54, respectively. The number of different eigenvalues, Nλ, increase in the manner of Nλ ∝N0.58 and Nλ ∝E0.47. The middle part of the spectral distribution can be fitted by a line with slope - 0.01 in each of the large networks, whereas two segments with the same slope - 0.03 for 0 ≪ N < 260 and - 0.02 for 260 < N < 2800 are needed for the single networks. An "M"-shape distribution appears in each of the spectral densities of the large networks. These and other results can provide useful insight into the structural properties of English linguistic networks.

  4. Report to Congress on abnormal occurrences, October--December 1993. Volume 16, No. 4

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Not Available

    1994-04-01

    Section 208 of the Energy Reorganization Act of 1974 identifies an abnormal occurrence as an unscheduled incident or event that the Nuclear Regulatory Commission determines to be significant from the standpoint of public health or safety and requires a quarterly report of such events to be made to Congress. This report covers the period from October 1 through December 31, 1993. This report discusses six abnormal occurrences at NRC-licensed facilities. Five involved medical brachytherapy misadministrations, and one involved an overexposure to a nursing infant. Seven abnormal occurrences that were reported by the Agreement States are also discussed, based on informationmore » provided by the Agreement States as of February 28, 1994. Of these events, three involved brachytherapy misadministrations, one involved a teletherapy misadministration, one involved a theft of radioactive material during transport and improper disposal, and two involved lost sources.« less

  5. Spatial and Temporal Variations in the Occurrence and Foraging Activity of Coastal Dolphins in Menai Bay, Zanzibar, Tanzania.

    PubMed

    Temple, Andrew J; Tregenza, Nick; Amir, Omar A; Jiddawi, Narriman; Berggren, Per

    2016-01-01

    Understanding temporal patterns in distribution, occurrence and behaviour is vital for the effective conservation of cetaceans. This study used cetacean click detectors (C-PODs) to investigate spatial and temporal variation in occurrence and foraging activity of the Indo-Pacific bottlenose (Tursiops aduncus) and Indian Ocean humpback (Sousa plumbea) dolphins resident in the Menai Bay Conservation Area (MBCA), Zanzibar, Tanzania. Occurrence was measured using detection positive minutes. Inter-click intervals were used to identify terminal buzz vocalisations, allowing for analysis of foraging activity. Data were analysed in relation to spatial (location) and temporal (monsoon season, diel phase and tidal phase) variables. Results showed significantly increased occurrence and foraging activity of dolphins in southern areas and during hours of darkness. Higher occurrence at night was not explained by diel variation in echolocation rate and so were considered representative of occurrence patterns. Both tidal phase and monsoon season influenced occurrence but results varied among sites, with no general patterns found. Foraging activity was greatest during hours of darkness, High water and Flood tidal phases. Comparisons of echolocation data among sites suggested differences in the broadband click spectra of MBCA dolphins, possibly indicative of species differences. These dolphin populations are threatened by unsustainable fisheries bycatch and tourism activities. The spatial and temporal patterns identified in this study have implications for future conservation and management actions with regards to these two threats. Further, the results indicate future potential for using passive acoustics to identify and monitor the occurrence of these two species in areas where they co-exist.

  6. Parameters of Glucose and Lipid Metabolism Affect the Occurrence of Colorectal Adenomas Detected by Surveillance Colonoscopies

    PubMed Central

    Kim, Nam Hee; Suh, Jung Yul; Park, Jung Ho; Park, Dong Il; Cho, Yong Kyun; Sohn, Chong Il; Choi, Kyuyong

    2017-01-01

    Purpose Limited data are available regarding the associations between parameters of glucose and lipid metabolism and the occurrence of metachronous adenomas. We investigated whether these parameters affect the occurrence of adenomas detected on surveillance colonoscopy. Materials and Methods This longitudinal study was performed on 5289 subjects who underwent follow-up colonoscopy between 2012 and 2013 among 62171 asymptomatic subjects who underwent an initial colonoscopy for a health check-up between 2010 and 2011. The risk of adenoma occurrence was assessed using Cox proportional hazards modeling. Results The mean interval between the initial and follow-up colonoscopy was 2.2±0.6 years. The occurrence of adenomas detected by the follow-up colonoscopy increased linearly with the increasing quartiles of fasting glucose, hemoglobin A1c (HbA1c), insulin, homeostasis model assessment of insulin resistance (HOMA-IR), and triglycerides measured at the initial colonoscopy. These associations persisted after adjusting for confounding factors. The adjusted hazard ratios for adenoma occurrence comparing the fourth with the first quartiles of fasting glucose, HbA1c, insulin, HOMA-IR, and triglycerides were 1.50 [95% confidence interval (CI), 1.26–1.77; ptrend<0.001], 1.22 (95% CI, 1.04–1.43; ptrend=0.024), 1.22 (95% CI, 1.02–1.46; ptrend=0.046), 1.36 (95% CI, 1.14–1.63; ptrend=0.004), and 1.19 (95% CI, 0.99–1.42; ptrend=0.041), respectively. In addition, increasing quartiles of low-density lipoprotein-cholesterol and apolipoprotein B were associated with an increasing occurrence of adenomas. Conclusion The levels of parameters of glucose and lipid metabolism were significantly associated with the occurrence of adenomas detected on surveillance colonoscopy. Improving the parameters of glucose and lipid metabolism through lifestyle changes or medications may be helpful in preventing metachronous adenomas. PMID:28120565

  7. Surface-Based Observations of Contrail Occurrence Over the US, Apr. 1993 to Apr. 1994

    NASA Technical Reports Server (NTRS)

    Minnis, Patrick; Ayers, J. Kirk; Weaver, Steven P.

    1997-01-01

    Surface observers stationed at 19 U.S. Air Force Bases and Army Air Stations recorded the daytime occurrence of contrails and cloud fraction on an hourly basis for the period April 1993 through April 1994. Each observation uses one of four main categories to report contrails as unobserved, non-persistent, persistent, and indeterminate. Additional classification includes the co-occurrence of cirrus with each report. The data cover much of the continental U.S. including locations near major commercial air routes. The mean annual frequency of occurrence in unobstructed viewing conditions is 13 percent for these sites. Contrail occurrence varied substantially with location and season. Most contrails occurred during the winter months and least during the summer with a pronounced minimum during July. Although nocturnal observations are not available, it appears that the contrails have a diurnal variation that peaks during mid morning over most areas. Contrails were most often observed in areas near major commercial air corridors and least often over areas far removed from the heaviest air traffic. A significant correlation exists between mean contrail frequency and aircraft fuel usage above 7 km suggesting predictive potential for assessing future contrail effects on climate.

  8. Detection of LSB+/-1 steganography based on co-occurrence matrix and bit plane clipping

    NASA Astrophysics Data System (ADS)

    Abolghasemi, Mojtaba; Aghaeinia, Hassan; Faez, Karim; Mehrabi, Mohammad Ali

    2010-01-01

    Spatial LSB+/-1 steganography changes smooth characteristics between adjoining pixels of the raw image. We present a novel steganalysis method for LSB+/-1 steganography based on feature vectors derived from the co-occurrence matrix in the spatial domain. We investigate how LSB+/-1 steganography affects the bit planes of an image and show that it changes more least significant bit (LSB) planes of it. The co-occurrence matrix is derived from an image in which some of its most significant bit planes are clipped. By this preprocessing, in addition to reducing the dimensions of the feature vector, the effects of embedding were also preserved. We compute the co-occurrence matrix in different directions and with different dependency and use the elements of the resulting co-occurrence matrix as features. This method is sensitive to the data embedding process. We use a Fisher linear discrimination (FLD) classifier and test our algorithm on different databases and embedding rates. We compare our scheme with the current LSB+/-1 steganalysis methods. It is shown that the proposed scheme outperforms the state-of-the-art methods in detecting the LSB+/-1 steganographic method for grayscale images.

  9. Phylogenetic fields through time: temporal dynamics of geographical co-occurrence and phylogenetic structure within species ranges

    PubMed Central

    Carotenuto, Francesco; Diniz-Filho, José Alexandre F.

    2016-01-01

    Species co-occur with different sets of other species across their geographical distribution, which can be either closely or distantly related. Such co-occurrence patterns and their phylogenetic structure within individual species ranges represent what we call the species phylogenetic fields (PFs). These PFs allow investigation of the role of historical processes—speciation, extinction and dispersal—in shaping species co-occurrence patterns, in both extinct and extant species. Here, we investigate PFs of large mammalian species during the last 3 Myr, and how these correlate with trends in diversification rates. Using the fossil record, we evaluate species' distributional and co-occurrence patterns along with their phylogenetic structure. We apply a novel Bayesian framework on fossil occurrences to estimate diversification rates through time. Our findings highlight the effect of evolutionary processes and past climatic changes on species' distributions and co-occurrences. From the Late Pliocene to the Recent, mammal species seem to have responded in an individualistic manner to climate changes and diversification dynamics, co-occurring with different sets of species from different lineages across their geographical ranges. These findings stress the difficulty of forecasting potential effects of future climate changes on biodiversity. PMID:26977061

  10. Phylogenetic fields through time: temporal dynamics of geographical co-occurrence and phylogenetic structure within species ranges.

    PubMed

    Villalobos, Fabricio; Carotenuto, Francesco; Raia, Pasquale; Diniz-Filho, José Alexandre F

    2016-04-05

    Species co-occur with different sets of other species across their geographical distribution, which can be either closely or distantly related. Such co-occurrence patterns and their phylogenetic structure within individual species ranges represent what we call the species phylogenetic fields (PFs). These PFs allow investigation of the role of historical processes--speciation, extinction and dispersal--in shaping species co-occurrence patterns, in both extinct and extant species. Here, we investigate PFs of large mammalian species during the last 3 Myr, and how these correlate with trends in diversification rates. Using the fossil record, we evaluate species' distributional and co-occurrence patterns along with their phylogenetic structure. We apply a novel Bayesian framework on fossil occurrences to estimate diversification rates through time. Our findings highlight the effect of evolutionary processes and past climatic changes on species' distributions and co-occurrences. From the Late Pliocene to the Recent, mammal species seem to have responded in an individualistic manner to climate changes and diversification dynamics, co-occurring with different sets of species from different lineages across their geographical ranges. These findings stress the difficulty of forecasting potential effects of future climate changes on biodiversity. © 2016 The Author(s).

  11. Packaging- and transportation-related occurrence reports : FY 1995 annual report

    DOT National Transportation Integrated Search

    1996-03-01

    The Oak Ridge National Laboratory, through its support to the U.S. Department of Energys (DOEs) Office of Facility Safety Analysis, EH-32, retrieves reports and information pertaining to transportation and packaging occurrences from the centralized O...

  12. Method Development, Monitoring, and Occurrence of Microcystins in Ambient Water

    EPA Science Inventory

    The occurrence and intensity of cyanobacterial harmful blooms have become increasingly common over the last few decades. Cyanobacteria are a worldwide concern in areas with eutrophic water conditions. Cyanotoxins generated from cyanobacteria are harmful ecologically, cause econom...

  13. Software for analysis of chemical mixtures--composition, occurrence, distribution, and possible toxicity

    USGS Publications Warehouse

    Scott, Jonathon C.; Skach, Kenneth A.; Toccalino, Patricia L.

    2013-01-01

    The composition, occurrence, distribution, and possible toxicity of chemical mixtures in the environment are research concerns of the U.S. Geological Survey and others. The presence of specific chemical mixtures may serve as indicators of natural phenomena or human-caused events. Chemical mixtures may also have ecological, industrial, geochemical, or toxicological effects. Chemical-mixture occurrences vary by analyte composition and concentration. Four related computer programs have been developed by the National Water-Quality Assessment Program of the U.S. Geological Survey for research of chemical-mixture compositions, occurrences, distributions, and possible toxicities. The compositions and occurrences are identified for the user-supplied data, and therefore the resultant counts are constrained by the user’s choices for the selection of chemicals, reporting limits for the analytical methods, spatial coverage, and time span for the data supplied. The distribution of chemical mixtures may be spatial, temporal, and (or) related to some other variable, such as chemical usage. Possible toxicities optionally are estimated from user-supplied benchmark data. The software for the analysis of chemical mixtures described in this report is designed to work with chemical-analysis data files retrieved from the U.S. Geological Survey National Water Information System but can also be used with appropriately formatted data from other sources. Installation and usage of the mixture software are documented. This mixture software was designed to function with minimal changes on a variety of computer-operating systems. To obtain the software described herein and other U.S. Geological Survey software, visit http://water.usgs.gov/software/.

  14. Occurrence of Pepper Mild Mottle Virus in Drinking Water Sources in Japan

    PubMed Central

    Kitajima, Masaaki; Kishida, Naohiro; Konno, Yoshiaki; Katayama, Hiroyuki; Asami, Mari; Akiba, Michihiro

    2013-01-01

    Pepper mild mottle virus (PMMoV) is a plant virus that has been recently proposed as a potential indicator of human fecal contamination of environmental waters; however, information on its geographical occurrence in surface water is still limited. We aimed to determine the seasonal and geographic occurrence of PMMoV in drinking water sources all over Japan. Between July 2008 and February 2011, 184 source water samples were collected from 30 drinking water treatment plants (DWTPs); viruses from 1 to 2 liters of each sample were concentrated by using an electronegative membrane, followed by RNA extraction and reverse transcription. Using quantitative PCR, PMMoV was detected in 140 (76%) samples, with a concentration ranging from 2.03 × 103 to 2.90 × 106 copies/liter. At least one of the samples from 27 DWTPs (n = 4 or 8) was positive for PMMoV; samples from 10 of these DWTPs were always contaminated. There was a significant difference in the occurrence of PMMoV among geographical regions but not a seasonal difference. PMMoV was frequently detected in samples that were negative for human enteric virus or Escherichia coli. A phylogenetic analysis based on the partial nucleotide sequences of the PMMoV coat protein gene in 12 water samples from 9 DWTPs indicated that there are genetically diverse PMMoV strains present in drinking water sources in Japan. To our knowledge, this is the first study to demonstrate the occurrence of PMMoV in environmental waters across wide geographical regions. PMID:24056461

  15. The occurrence of convective systems with a bow echo in warm season in Poland

    NASA Astrophysics Data System (ADS)

    Celiński-Mysław, Daniel; Palarz, Angelika

    2017-09-01

    The characteristics of occurrence of convective systems with a bow echo in Poland in the warm season between 2007 and 2014 were presented. Using the identification criteria proposed by Fujita (1978), Burke and Schultz (2004), Klimowski et al. (2000, 2004), and supplemented by Gatzen (2013), 91 bow echo cases were identified in the analysed period. Depending on the year, the maximum number of cases usually occurred in July or August. From the multi-annual perspective, 28 and 30 cases occurred in those months. The diurnal variation of bow echo occurrences showed that it developed, or entered the Polish territory, usually between the hours of 13:00 UTC and 21:00 UTC, while it disappeared or receded beyond the country border in the hours between 15:00 UTC and 23:00 UTC. The areas most exposed to the occurrence of bow echo included the northern part of Lubuskie and Wielkopolska provinces, the southern part of West Pomerania province, Łódź province and Silesia province. In the period studied, the south-western direction of movement of convective systems with a bow echo was prevalent. This direction changed, however, depending on the region and the month of occurrence. The type and development mode of a bow echo, as well as synoptic conditions conducive to its occurrence were defined for selected cases. The results showed that BECs (bow-echo complex) and BEs (classic bow echo) were the predominant types (respectively 43 and 29 cases). Bow echoes developed most frequently from a squall line, or from a combination of a few, often weakly organized convective cells.

  16. Prevalence and factors associated with the co-occurrence of health risk behaviors in adolescents

    PubMed Central

    Brito, Anísio Luiz da Silva; Hardman, Carla Meneses; de Barros, Mauro Virgílio Gomes

    2015-01-01

    Objective: To analyze the prevalence and factors associated with the co-occurrence of health risk behaviors in adolescents. Methods: A cross-sectional study was performed with a sample of high school students from state public schools in Pernambuco, Brazil (n=4207, 14-19 years old). Data were obtained using a questionnaire. The co-occurrence of health risk behaviors was established based on the sum of five behavioral risk factors (low physical activity, sedentary behavior, low consumption of fruits/vegetables, alcohol consumption and tobacco use). The independent variables were gender, age group, time of day attending school, school size, maternal education, occupational status, skin color, geographic region and place of residence. Data were analyzed by ordinal logistic regression with proportional odds model. Results: Approximately 10% of adolescents were not exposed to health risk behaviors, while 58.5% reported being exposed to at least two health risk behaviors simultaneously. There was a higher likelihood of co-occurrence of health risk behaviors among adolescents in the older age group, with intermediate maternal education (9-11 years of schooling), and who reported living in the driest (semi-arid) region of the state of Pernambuco. Adolescents who reported having a job and living in rural areas had a lower likelihood of co-occurrence of risk behaviors. Conclusions: The findings suggest a high prevalence of co-occurrence of health risk behaviors in this group of adolescents, with a higher chance in five subgroups (older age, intermediate maternal education, the ones that reported not working, those living in urban areas and in the driest region of the state). PMID:26298656

  17. Familial occurrence of complete agenesis of the diaphragm.

    PubMed

    Sripathi, V; Beasley, S W

    1992-04-01

    The tenth occurrence of complete unilateral agenesis of the diaphragm (McKusick 22240) in siblings is reported in this study. It is likely that parents of children with this type of congenital diaphragmatic hernia have a significantly increased recurrence risk for future offspring. Genetic counselling and antenatal ultrasound should be considered for subsequent pregnancies in families with a previous child with complete agenesis of the diaphragm.

  18. Natural Occurrence of Nivalenol, Deoxynivalenol, and Deoxynivalenol-3-Glucoside in Polish Winter Wheat

    PubMed Central

    Bryła, Marcin; Ksieniewicz-Woźniak, Edyta; Waśkiewicz, Agnieszka; Szymczyk, Krystyna; Jędrzejczak, Renata

    2018-01-01

    The presence of mycotoxins in cereal grain is a very important food safety factor. The occurrence of “masked” mycotoxins has been intensively investigated in recent years. In this study, the occurrence of nivalenol, deoxynivalenol-3-glucoside, and deoxynivalenol in 92 samples of winter wheat from Polish cultivars was determined. The frequency of the occurrence of deoxynivalenol and nivalenol in the samples was 83% and 70%, respectively. The average content of the analytes was: for deoxynivalenol 140.2 µg/kg (10.5–1265.4 µg/kg), for nivalenol 35.0 µg/kg (5.1–372.5 µg/kg). Deoxynivalenol-3-glucoside, the formation of which is connected with the biotransformation pathway in plants, was present in 27% of tested wheat samples; its average content was 41.9 µg/kg (15.8–137.5 µg/kg). The relative content of deoxynivalenol-3-glucoside (DON-3G) compared to deoxynivalenol (DON) in positive samples was 4–37%. Despite the high frequency of occurrence of these mycotoxins, the quality of wheat from the 2016 season was good. The maximum content of DON, as defined in EU regulations (1250 µg/kg), was exceeded in only one sample. Nevertheless, the presence of a glycosidic derivative of deoxynivalenol can increase the risk to food safety, as it can be hydrolyzed by intestinal microflora. PMID:29438296

  19. Consonant-Vowel Co-Occurrence Patterns in Mandarin-Learning Infants

    ERIC Educational Resources Information Center

    Chen, Li-Mei; Kent, Raymond D.

    2005-01-01

    Most studies on CV co-occurrence patterns in early phonetic development have been based on Indo-European languages. Data from infants learning Mandarin, which has a substantially different phonological system from Indo-European languages, can confirm or refute the findings of previous studies, thus shedding further light on the theoretical bases…

  20. Chiral pharmaceuticals: A review on their environmental occurrence and fate processes.

    PubMed

    Sanganyado, Edmond; Lu, Zhijiang; Fu, Qiuguo; Schlenk, Daniel; Gan, Jay

    2017-11-01

    More than 50% of pharmaceuticals in current use are chiral compounds. Enantiomers of the same pharmaceutical have identical physicochemical properties, but may exhibit differences in pharmacokinetics, pharmacodynamics and toxicity. The advancement in separation and detection methods has made it possible to analyze trace amounts of chiral compounds in environmental media. As a result, interest on chiral analysis and evaluation of stereoselectivity in environmental occurrence, phase distribution and degradation of chiral pharmaceuticals has grown substantially in recent years. Here we review recent studies on the analysis, occurrence, and fate of chiral pharmaceuticals in engineered and natural environments. Monitoring studies have shown ubiquitous presence of chiral pharmaceuticals in wastewater, surface waters, sediments, and sludge, particularly β-receptor antagonists, analgesics, antifungals, and antidepressants. Selective sorption and microbial degradation have been demonstrated to result in enrichment of one enantiomer over the other. The changes in enantiomer composition may also be caused by biologically catalyzed chiral inversion. However, accurate evaluation of chiral pharmaceuticals as trace environmental pollutants is often hampered by the lack of identification of the stereoconfiguration of enantiomers. Furthermore, a systematic approach including occurrence, fate and transport in various environmental matrices is needed to minimize uncertainties in risk assessment of chiral pharmaceuticals as emerging environmental contaminants. Copyright © 2017 Elsevier Ltd. All rights reserved.

  1. FADO: a statistical method to detect favored or avoided distances between occurrences of motifs using the Hawkes' model.

    PubMed

    Gusto, Gaelle; Schbath, Sophie

    2005-01-01

    We propose an original statistical method to estimate how the occurrences of a given process along a genome, genes or motifs for instance, may be influenced by the occurrences of a second process. More precisely, the aim is to detect avoided and/or favored distances between two motifs, for instance, suggesting possible interactions at a molecular level. For this, we consider occurrences along the genome as point processes and we use the so-called Hawkes' model. In such model, the intensity at position t depends linearly on the distances to past occurrences of both processes via two unknown profile functions to estimate. We perform a non parametric estimation of both profiles by using B-spline decompositions and a constrained maximum likelihood method. Finally, we use the AIC criterion for the model selection. Simulations show the excellent behavior of our estimation procedure. We then apply it to study (i) the dependence between gene occurrences along the E. coli genome and the occurrences of a motif known to be part of the major promoter for this bacterium, and (ii) the dependence between the yeast S. cerevisiae genes and the occurrences of putative polyadenylation signals. The results are coherent with known biological properties or previous predictions, meaning this method can be of great interest for functional motif detection, or to improve knowledge of some biological mechanisms.

  2. Occurrence and mechanisms of impact melt emplacement at small lunar craters

    NASA Astrophysics Data System (ADS)

    Stopar, Julie D.; Hawke, B. Ray; Robinson, Mark S.; Denevi, Brett W.; Giguere, Thomas A.; Koeber, Steven D.

    2014-11-01

    Using observations from the Lunar Reconnaissance Orbiter Camera (LROC), we assess the frequency and occurrence of impact melt at simple craters less than 5 km in diameter. Nine-hundred-and-fifty fresh, randomly distributed impact craters were identified for study based on their maturity, albedo, and preservation state. The occurrence, frequency, and distribution of impact melt deposits associated with these craters, particularly ponded melt and lobate flows, are diagnostic of melt emplacement mechanisms. Like larger craters, those smaller than a few kilometers in diameter often exhibit ponded melt on the crater floor as well as lobate flows near the crater rim crest. The morphologies of these deposits suggest gravity-driven flow while the melt was molten. Impact melt deposits emplaced as veneers and ;sprays;, thin layers of ejecta that drape other crater materials, indicate deposition late in the cratering process; the deposits of fine sprays are particularly sensitive to degradation. Exterior melt deposits found near the rims of a few dozen craters are distributed asymmetrically around the crater and are rare at craters less than 2 km in diameter. Pre-existing topography plays a role in the occurrence and distribution of these melt deposits, particularly for craters smaller than 1 km in diameter, but does not account for all observed asymmetries in impact melt distribution. The observed relative abundance and frequency of ponded melt and flows in and around simple lunar craters increases with crater diameter, as was previously predicted from models. However, impact melt deposits are found more commonly at simple lunar craters (i.e., those less than a few kilometers in diameter) than previously expected. Ponded melt deposits are observed in roughly 15% of fresh craters smaller than 300 m in diameter and 80% of fresh craters between 600 m and 5 km in diameter. Furthermore, melt deposits are observed at roughly twice as many non-mare craters than at mare craters. We

  3. Rare co-occurrence of osteogenesis imperfecta type I and autosomal dominant polycystic kidney disease.

    PubMed

    Hoefele, Julia; Mayer, Karin; Marschall, Christoph; Alberer, Martin; Klein, Hanns-Georg; Kirschstein, Martin

    2016-11-01

    There are several clinical reports about the co-occurrence of autosomal dominant polycystic kidney disease (ADPKD) and connective tissue disorders. A simultaneous occurrence of osteogenesis imperfecta (OI) type I and ADPKD has not been observed so far. This report presents the first patient with OI type I and ADPKD. Mutational analysis of PKD1 and COL1A1 in the index patient revealed a heterozygous mutation in each of the two genes. Mutational analysis of the parents indicated the mother as a carrier of the PKD1 mutation and the father as a carrier of the COL1A1 mutation. The simultaneous occurrence of both disorders has an estimated frequency of 3.5:100 000 000. In singular cases, ADPKD can occur in combination with other rare disorders, e.g. connective tissue disorders.

  4. Reported Historic Asbestos Mines, Historic Asbestos Prospects, and Other Natural Occurrences of Asbestos in Oregon and Washington

    USGS Publications Warehouse

    Van Gosen, Bradley S.

    2010-01-01

    This map and its accompanying dataset provide information for 51 natural occurrences of asbestos in Washington and Oregon, using descriptions found in the geologic literature. Data on location, mineralogy, geology, and relevant literature for each asbestos site are provided. Using the map and digital data in this report, the user can examine the distribution of previously reported asbestos occurrences and their geological characteristics in the Pacific Northwest States of Washington and Oregon. This report is part of an ongoing study by the U.S. Geological Survey to identify and map reported natural asbestos occurrences in the United States, which thus far includes similar maps and datasets of natural asbestos occurrences within the Eastern United States (http://pubs.usgs.gov/of/2005/1189/), the Central United States (http://pubs.usgs.gov/of/2006/1211/), the Rocky Mountain States (http://pubs.usgs.gov/of/2007/1182/), and the Southwestern United States (http://pubs.usgs.gov/of/2008/1095/). These reports are intended to provide State and local government agencies and other stakeholders with geologic information on natural occurrences of asbestos in the United States.

  5. Folivory and disease occurrence on Ludwigia hexapetala in Guntersville Reservoir

    USDA-ARS?s Scientific Manuscript database

    We report leaf feeding, disease occurrence and associated indigenous herbivore/fungal pathogen communities on the introduced wetland species Ludwigia hexapetala at Guntersville Reservoir, AL. Plant populations were sampled on three dates from May to September, 2014. A complex of indigenous herbivore...

  6. Discovering multi-scale co-occurrence patterns of asthma and influenza with the Oak Ridge bio-surveillance toolkit

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ramanathan, Arvind; Pullum, Laura L.; Hobson, Tanner C.

    Here, we describe a data-driven unsupervised machine learning approach to extract geo-temporal co-occurrence patterns of asthma and the flu from large-scale electronic healthcare reimbursement claims (eHRC) datasets. Specifically, we examine the eHRC data from 2009 to 2010 pandemic H1N1 influenza season and analyze whether different geographic regions within the United States (US) showed an increase in co-occurrence patterns of the flu and asthma. Our analyses reveal that the temporal patterns extracted from the eHRC data show a distinct lag time between the peak incidence of the asthma and the flu. While the increased occurrence of asthma contributed to increased flumore » incidence during the pandemic, this co-occurrence is predominant for female patients. The geo-temporal patterns reveal that the co-occurrence of the flu and asthma are typically concentrated within the south-east US. Further, in agreement with previous studies, large urban areas (such as New York, Miami, and Los Angeles) exhibit co-occurrence patterns that suggest a peak incidence of asthma and flu significantly early in the spring and winter seasons. Together, our data-analytic approach, integrated within the Oak Ridge Bio-surveillance Toolkit platform, demonstrates how eHRC data can provide novel insights into co-occurring disease patterns.« less

  7. Discovering multi-scale co-occurrence patterns of asthma and influenza with the Oak Ridge bio-surveillance toolkit

    DOE PAGES

    Ramanathan, Arvind; Pullum, Laura L.; Hobson, Tanner C.; ...

    2015-08-03

    Here, we describe a data-driven unsupervised machine learning approach to extract geo-temporal co-occurrence patterns of asthma and the flu from large-scale electronic healthcare reimbursement claims (eHRC) datasets. Specifically, we examine the eHRC data from 2009 to 2010 pandemic H1N1 influenza season and analyze whether different geographic regions within the United States (US) showed an increase in co-occurrence patterns of the flu and asthma. Our analyses reveal that the temporal patterns extracted from the eHRC data show a distinct lag time between the peak incidence of the asthma and the flu. While the increased occurrence of asthma contributed to increased flumore » incidence during the pandemic, this co-occurrence is predominant for female patients. The geo-temporal patterns reveal that the co-occurrence of the flu and asthma are typically concentrated within the south-east US. Further, in agreement with previous studies, large urban areas (such as New York, Miami, and Los Angeles) exhibit co-occurrence patterns that suggest a peak incidence of asthma and flu significantly early in the spring and winter seasons. Together, our data-analytic approach, integrated within the Oak Ridge Bio-surveillance Toolkit platform, demonstrates how eHRC data can provide novel insights into co-occurring disease patterns.« less

  8. Accounting for Occurrences: A New View of the Use of Contingency Information in Causal Judgment

    ERIC Educational Resources Information Center

    White, Peter A.

    2008-01-01

    When people make causal judgments from contingency information, a principal aim is to account for occurrences of the outcome. When 2 causes are under consideration, the capacity of either to account for occurrences is judged from how likely the cause is to be present when the outcome occurs and from the rate at which the outcome occurs when that…

  9. Occurrence of infectious diseases in dialysed patients.

    PubMed

    Borzecki, Andrzej; Pikuła, Anna; Stadnik, Adam; Janowska-Nowosad, Justyna; Dyczko, Dorota; Borzecka, Halina

    2004-01-01

    Chronic kidneys' failure as well as hemodialysis operations lead to disorders of many organs' and system's functions. We can observe a decrease in the immunulogical system's efficiency, which consequently causes the decrease in a human body's defence abilities. The dialysed patients are subject to a frequent contact with medical equipment and they require numerous examinations. All these factors, including the dialysis itself, increase the risk of occurrence of various types of infections, both bacterial and viral ones. The aim of the work was to try to define the kind and frequency of infectious diseases occurring among the dialysed patients. In order to conduct the research, the questionnaire among 50 patients in the centre of dialysis of the hospital in Chełm was made. Among the examined group, the most frequently occurring infectious diseases were infections of the ureter, bronchitis, flu and ear infection. Among 30% of the examined, inflammatory and thrombotic changes within a dialysis drainage tube occurred. 22% of the examined are the carriers of HBV. Among 36%, however, the antibodies of HCV were detected. 1. The hemodialysed patients make up a group that is at increased risk of infectious diseases. 2. The infection of B and C type is the exceptional problem among the hemodialysed patients. 3. The frequency of infectious diseases occurrence increases along with age and length of dialysotherapy. 4. Education of the patients about how to prevent infections brings measurable effects in the form of the decreasing number of morbidity cases.

  10. The oldest South American occurrence of Spinosauridae (Dinosauria, Theropoda)

    NASA Astrophysics Data System (ADS)

    Sales, Marcos A. F.; Liparini, Alexandre; de Andrade, Marco B.; Aragão, Paulo R. L.; Schultz, Cesar L.

    2017-03-01

    A new fossil site, called 'Canafístula 01', has yielded the first archosaur remains from the Berriasian-Valanginian Feliz Deserto Formation, Sergipe-Alagoas Basin, northeastern Brazil. Most of them comprise crocodylomorph teeth and osteoderms. However, the most remarkable specimen is a partial tooth assigned to Spinosauridae, based on the unique combination of the following features: (1) unfluted root almost as wide as the crown base, with a large pulp cavity; (2) straight and more regularly spaced flutes of the crown, formed by both the enamel and the dentine; and (3) unserrated carina on a mesiodistal plane coinciding with the main plane of curvature of the crown. This is the oldest occurrence of a spinosaurid from South America. In addition, given the unserrated distal carina, this tooth might have closer affinities with the subfamily Spinosaurinae, which would also represent the oldest spinosaurine record worldwide. Thus, the occurrence of a spinosaurid in the Feliz Deserto Formation points to a latent potential for new relevant findings in northeastern Brazil and the necessity for greater collection efforts in this region.

  11. Occurrence of carbapenemase-producing bacteria in coastal recreational waters.

    PubMed

    Montezzi, Lara Feital; Campana, Eloiza Helena; Corrêa, Laís Lisboa; Justo, Livia Helena; Paschoal, Raphael Paiva; da Silva, Isabel Lemos Vieira Dias; Souza, Maria do Carmo Maciel; Drolshagen, Marcia; Picão, Renata Cristina

    2015-02-01

    The spread of carbapenemase-producing Gram-negative rods is an emerging global problem. Although most infections due to carbapenemase producers are limited to healthcare institutions, reports of the occurrence of clinically relevant carbapenemase producers in sewage and polluted rivers are increasingly frequent. Polluted rivers flowing to oceans may contaminate coastal waters with multidrug-resistant bacteria, potentially threatening the safety of recreational activities in these locations. Here we assessed the occurrence of carbapenemase producers in water from touristic beaches located in Rio de Janeiro, Brazil, showing distinct pollution patterns. The presence of enterobacteria was noted, including the predominantly environmental genus Kluyvera spp., producing either Klebsiella pneumoniae carbapenemase (KPC) or Guyana extended-spectrum (GES)-type carbapenemases and often associated with quinolone resistance determinants. An Aeromonas sp. harbouring blaKPC and qnrS was also observed. These findings strengthen the role of aquatic matrices as reservoirs and vectors of clinically relevant antimicrobial-resistant bacteria, with potential to favour the spread of these resistance threats throughout the community. Copyright © 2014 Elsevier B.V. and the International Society of Chemotherapy. All rights reserved.

  12. Hypergraph-based anomaly detection of high-dimensional co-occurrences.

    PubMed

    Silva, Jorge; Willett, Rebecca

    2009-03-01

    This paper addresses the problem of detecting anomalous multivariate co-occurrences using a limited number of unlabeled training observations. A novel method based on using a hypergraph representation of the data is proposed to deal with this very high-dimensional problem. Hypergraphs constitute an important extension of graphs which allow edges to connect more than two vertices simultaneously. A variational Expectation-Maximization algorithm for detecting anomalies directly on the hypergraph domain without any feature selection or dimensionality reduction is presented. The resulting estimate can be used to calculate a measure of anomalousness based on the False Discovery Rate. The algorithm has O(np) computational complexity, where n is the number of training observations and p is the number of potential participants in each co-occurrence event. This efficiency makes the method ideally suited for very high-dimensional settings, and requires no tuning, bandwidth or regularization parameters. The proposed approach is validated on both high-dimensional synthetic data and the Enron email database, where p > 75,000, and it is shown that it can outperform other state-of-the-art methods.

  13. El Niño-Southern Oscillation, local weather and occurrences of dengue virus serotypes

    NASA Astrophysics Data System (ADS)

    Huang, Xiaodong; Clements, Archie C. A.; Williams, Gail; Devine, Gregor; Tong, Shilu; Hu, Wenbiao

    2015-11-01

    Severe dengue fever is usually associated with secondary infection by a dengue virus (DENV) serotype (1 to 4) that is different to the serotype of the primary infection. Dengue outbreaks only occur following importations of DENV in Cairns, Australia. However, the majority of imported cases do not result in autochthonous transmission in Cairns. Although DENV transmission is strongly associated with the El Niño-Southern Oscillation (ENSO) climate cycle and local weather conditions, the frequency and potential risk factors of infections with the different DENV serotypes, including whether or not they differ, is unknown. This study used a classification tree model to identify the hierarchical interactions between Southern Oscillation Index (SOI), local weather factors, the presence of imported serotypes and the occurrence of the four autochthonous DENV serotypes from January 2000-December 2009 in Cairns. We found that the 12-week moving average of SOI and the 2-week moving average of maximum temperature were the most important factors influencing the variation in the weekly occurrence of the four DENV serotypes, the likelihoods of the occurrence of the four DENV serotypes may be unequal under the same environmental conditions, and occurrence may be influenced by changes in global and local environmental conditions in Cairns.

  14. Investigating the nature and timing of the earliest human occupation of North America using a novel integration of biogeochemistry and sediment micromorphology

    NASA Astrophysics Data System (ADS)

    Shillito, Lisa-Marie; Jenkins, Dennis; Blong, John; Stafford, Thomas; Bull, Ian

    2017-04-01

    Coprolites contain a suite of biomolecules and microfossils, making them incredibly useful palaeoenvironmental and palaeodietary archives. The short-term nature of their production within the human body offers a very high temporal resolution, contrasting with traditional dietary proxies in archaeology such as skeletal C/N isotopes, which give an average lifetime signal. Some of the earliest evidence of human occupation in North America is a coprolite from Paisley Caves (Oregon, USA) which contained ancient human DNA in a matrix dated between 14,170 to 14,340 cal BP. However, there have been debates over the stratigraphic integrity and preservation of the aDNA. This debate is difficult to resolve as there is currently little understanding of the nature of biomolecule taphonomy and movement within the cave environment. Before broader questions of palaeodiet and resource use of these early settlers can be investigated, the identification of coprolite proxies as human or otherwise must be confirmed, and their stratigraphic integrity assessed. This research aims to address these issues by using a novel integration of biogeochemistry and sediment microstratigraphy to investigate the survival and taphonomy of different biomolecules within the cave environment and to understand how these early settlers interacted with their seasonal environment.

  15. A subanesthetic dose of ketamine in the Rhesus monkey reduces the occurrence of anticipatory saccades.

    PubMed

    Ameqrane, Ilhame; Ilhame, Ameqrane; Wattiez, Nicolas; Nicolas, Wattiez; Pouget, Pierre; Pierre, Pouget; Missal, Marcus; Marcus, Missal

    2015-10-01

    It has been shown that antagonism of the glutamatergic N-methyl-D-aspartate (NMDA) receptor with subanesthetic doses of ketamine perturbs the perception of elapsed time. Anticipatory eye movements are based on an internal representation of elapsed time. Therefore, the occurrence of anticipatory saccades could be a particularly sensitive indicator of abnormal time perception due to NMDA receptors blockade. The objective of this study was to determine whether the occurrence of anticipatory saccades could be selectively altered by a subanesthetic dose of ketamine. Three Rhesus monkeys were trained in a simple visually guided saccadic task with a variable delay. Monkeys were rewarded for making a visually guided saccade at the end of the delay. Premature anticipatory saccades to the future position of the eccentric target initiated before the end of the delay were not rewarded. A subanesthetic dose of ketamine (0.25 mg/kg) or a saline solution of the same volume was injected i.m. during the task. We found that the injected dose of ketamine did not induce sedation or abnormal behavior. However, in ∼4 min, ketamine induced a strong reduction of the occurrence of anticipatory saccades but did not reduce the occurrence of visually guided saccades. This unexpected reduction of anticipatory saccade occurrence could be interpreted as resulting from an altered use of the perception of elapsed time during the delay period induced by NMDA receptors antagonism.

  16. Risk and protective factors for the occurrence of sporadic pancreatic endocrine neoplasms.

    PubMed

    Valente, Roberto; Hayes, Alastair J; Haugvik, Sven-Petter; Hedenström, Per; Siuka, Darko; Korsæth, Emilie; Kämmerer, Daniel; Robinson, Stuart M; Maisonneuve, Patrick; Delle Fave, Gianfranco; Lindkvist, Bjorn; Capurso, Gabriele

    2017-08-01

    Pancreatic neuroendocrine neoplasms (PNENs) represent 10% of all pancreatic tumors by prevalence. Their incidence has reportedly increased over recent decades in parallel with that of pancreatic adenocarcinoma. PNENs are relatively rare, and of the few institutions that have published potential risk factors, findings have been heterogeneous. Our objective was to investigate the association between potential risk and protective factors for the occurrence of sporadic PNENs across a European population from several institutions. A multinational European case-control study was conducted to examine the association of selected environmental, family and medical exposure factors using a standardized questionnaire in face-to-face interviews. A ratio of 1:3 cases to controls were sex and age matched at each study site. Adjusted univariate and multivariate logistic regression analysis were performed for statistically significant factors. The following results were obtained: In 201 cases and 603 controls, non-recent onset diabetes (OR 2.09, CI 1.27-3.46) was associated with an increased occurrence of PNENs. The prevalence of non-recent onset diabetes was higher both in cases with metastatic disease (TNM stage III-IV) or advanced grade (G3) at the time of diagnosis. The use of metformin in combination with insulin was also associated with a more aggressive phenotype. Drinking coffee was more frequent in cases with localized disease at diagnosis. Our study concluded that non-recent onset diabetes was associated with an increased occurrence of PNENs and the combination of metformin and insulin was consistent with a more aggressive PNEN phenotype. In contrast to previous studies, smoking, alcohol and first-degree family history of cancer were not associated with PNEN occurrence. © 2017 Society for Endocrinology.

  17. East-west asymmetric of scintillation occurrence in Indonesia using GPS and GLONASS observations

    NASA Astrophysics Data System (ADS)

    Abadi, P.; Otsuka, Y.; Shiokawa, K.; Saito, S.; Husin, A.; Dear, V.; Anggarani, S.

    2015-12-01

    By using GNSS (Global Navigation Satellite Systems) receiver to collect amplitude scintillation at L1 frequency from GPS and GLONASS, we investigated ionospheric scintillation occurrence at equator anomaly in Indonesia from July 2014 to June 2015. The receiver is installed at Bandung (6.9 deg S, 107.6 deg E; 9.9 deg S mag. latitude), Indonesia. In this study, we grouped our analysis into two groups based on duration of observation, (1) July-December 2014 (monthly F10.7 ranged from 124.7-158.7) which is named autumn equinox and (2) January-June 2015 (monthly F10.7 ranged from 120.1-141.7) which is named spring equinox. Our preliminary results can be summarized as follows; (1) the intensity of scintillations at spring equinox is higher than at autumn equinox although solar activity at autumn equinox is higher than at spring equinox, see Figure 1 and (2) as shown in Figure 2, the directional distribution of scintillation occurrences at spring equinox mostly concentrate in the western sky, so we see east-west asymmetric, but the distribution at autumn equinox doesn't show clearly east-west asymmetric. Previous studies have reported that occurrence rate of the scintillation at spring equinox season is higher than at autumn equinox. Our results suggest that equinoctial asymmetry of scintillation occurrence can be also as an asymmetric of scintillation intensity and east-west asymmetric of scintillation occurrence between spring and autumn equinox. In general, plasma bubble is tilted westward as it vertically develop due to vertical shear in the eastward plasma drift in F region, and consequently, it will be tilted westward as it extends in latitude. Scintillation intensity will be stronger when signal propagation tend to be parallel with structure of the plasma bubble. Figure 2 also imply that the latitudinal extension of plasma bubble is higher at spring equinox than at autumn equinox. More the bubble extends in latitude, more the bubble structure exists in the western

  18. Modes of occurrence of potentially hazardous elements in coal: levels of confidence

    USGS Publications Warehouse

    Finkelman, R.B.

    1994-01-01

    The modes of occurrence of the potentially hazardous elements in coal will be of significance in any attempt to reduce their mobilization due to coal combustion. Antimony and selenium may be present in solid solution in pyrite, as minute accessory sulfides dispersed throughout the organic matrix, or in organic association. Because of these modes of occurrence it is anticipated that less than 50% of these elements will be routinely removed by conventional coal cleaning procedures. Arsenic and mercury occur primarily in late-stage coarse-grained pyrite therefore physical coal cleaning procedures should be successful in removing substantial proportions of these elements. Cadmium occurs in sphalerite and lead in galena. Both of these minerals exhibit a wide range of particle sizes and textural relations. Depending on the particle size and textural relations, physical coal cleaning may remove as little as 25% of these elements or as much as 75%. Manganese in bituminous coal occurs in carbonates, especially siderite. Physical coal cleaning should remove a substantial proportion of this element. More information is needed to elucidate the modes of occurrence of beryllium, chromium, cobalt, and nickel. ?? 1994.

  19. The Collaborative Longitudinal Personality Disorders Study: baseline Axis I/II and II/II diagnostic co-occurrence.

    PubMed

    McGlashan, T H; Grilo, C M; Skodol, A E; Gunderson, J G; Shea, M T; Morey, L C; Zanarini, M C; Stout, R L

    2000-10-01

    To describe baseline diagnostic co-occurrence in the Collaborative Longitudinal Personality Disorders Study. Six hundred and sixty-eight patients were reliably assessed with diagnostic interviews for DSM-IV Axis I and II disorders to create five groups: Schizotypal (STPD), Borderline (BPD), Avoidant (AVPD), Obsessive-Compulsive (OCPD) and Major Depressive Disorder (MDD) without personality disorder (PD). Mean number of Axis I lifetime diagnoses was 3.4; STPD and BPD groups had more diagnoses than AVPD, OCPD, and MDD groups. Significant Axis I co-occurrences emerged for Social Phobia/ AVPD, PTSD/BPD and Substance Use/BPD. Mean number of co-occurring PDs was 1.4; STPD had more than BPD group which had more than AVPD and OCPD groups. Significant PD co-occurrence emerged for: STPD/ Paranoid and Schizoid PDs, BPD with Antisocial and Dependent PDs, and lower frequency for OCPD/Antisocial PD. Diagnostic co-occurrences generally followed base rates, while significant departures resemble those of controlled literature.

  20. [Relationships between pollutants discharge and red tide occurrence in Shenzhen eastern coast].

    PubMed

    Jiang, Tian-jiu; Niu, Tao; Ying, Wen-ye

    2007-05-01

    The study on the effects of pollutants discharge on red tide occurrence in eastern sea area of Shenzhen showed that the occurrence frequency of dinoflagellate red tide had significant positive correlations with the net discharge of total nitrogen (TN) and total phosphorous (TP) as well as the N/P ratio of the discharge. The thresholds of net discharged TN and TP were estimated to be 3.917 x 10(3) t and 2.123 x 10(4) t, respectively. No significant correlation was observed between diatom red tide and alongshore pollutants discharge. An example was given to illustrate the means of pollutants discharge control.

  1. Occurrence and persistence of future atmospheric stagnation events

    NASA Astrophysics Data System (ADS)

    Horton, Daniel E.; Skinner, Christopher B.; Singh, Deepti; Diffenbaugh, Noah S.

    2014-08-01

    Poor air quality causes an estimated 2.6-4.4 million premature deaths per year. Hazardous conditions form when meteorological components allow the accumulation of pollutants in the near-surface atmosphere. Global-warming-driven changes to atmospheric circulation and the hydrological cycle are expected to alter the meteorological components that control pollutant build-up and dispersal, but the magnitude, direction, geographic footprint and public health impact of this alteration remain unclear. We used an air stagnation index and an ensemble of bias-corrected climate model simulations to quantify the response of stagnation occurrence and persistence to global warming. Our analysis projects increases in stagnation occurrence that cover 55% of the current global population, with areas of increase affecting ten times more people than areas of decrease. By the late twenty-first century, robust increases of up to 40 days per year are projected throughout the majority of the tropics and subtropics, as well as within isolated mid-latitude regions. Potential impacts over India, Mexico and the western US are particularly acute owing to the intersection of large populations and increases in the persistence of stagnation events, including those of extreme duration. These results indicate that anthropogenic climate change is likely to alter the level of pollutant management required to meet future air quality targets.

  2. Occurrence rate of ion upflow and downflow observed by the Poker Flat Incoherent Scatter Radar (PFISR)

    NASA Astrophysics Data System (ADS)

    Zou, S.; Lu, J.; Varney, R. H.

    2017-12-01

    This study aims to investigate the occurrence rate of ion upflow and downflow events in the auroral ionosphere, using a full 3-year (2011-2013) dataset collected by the Poker Flat Incoherent Scatter Radar (PFISR) at 65.5° magnetic latitude. Ion upflow and downflow events are defined if there are three consecutive data points larger/smaller than 100/-100 m/s in the ion field-aligned velocity altitude profile. Their occurrence rates have been evaluated as a function of magnetic local time (MLT), season, geomagnetic activity, solar wind and interplanetary magnetic field (IMF). We found that the ion upflows are twice more likely to occur on the nightside than the dayside, and have slightly higher occurrence rate near Fall equinox. In contrast, the ion downflow events are more likely to occur in the afternoon sector but also during Fall equinox. In addition, the occurrence rate of ion upflows on the nightside increases when the aurora electrojet index (AE) and planetary K index (Kp) increase, while the downflows measured on the dayside clearly increase as the AE and Kp increase. In general, the occurrence rate of ion upflows increases with enhanced solar wind and IMF drivers. This correlation is particularly strong between the upflows on the nightside and the solar wind dynamic pressure and IMF Bz. The lack of correlation of upflows on the dayside with these parameters is due to the location of PFISR, which is usually equatorward of the dayside auroral zone and within the nightside auroral zone under disturbed conditions. The occurrence rate of downflow at all MLTs does not show strong dependence on the solar wind and IMF conditions. However, it occurs much more frequently on the dayside when the IMF By is strongly positive, i.e., >10 nT and the IMF Bz is strongly negative, i.e., < -10 nT. We suggest that the increased occurrence rate of downflows on the dayside is associated with dayside storm-enhanced density and the plume.

  3. Substorm occurrence rates, substorm recurrence times, and solar wind structure

    NASA Astrophysics Data System (ADS)

    Borovsky, Joseph E.; Yakymenko, Kateryna

    2017-03-01

    Two collections of substorms are created: 28,464 substorms identified with jumps in the SuperMAG AL index in the years 1979-2015 and 16,025 substorms identified with electron injections into geosynchronous orbit in the years 1989-2007. Substorm occurrence rates and substorm recurrence-time distributions are examined as functions of the phase of the solar cycle, the season of the year, the Russell-McPherron favorability, the type of solar wind plasma at Earth, the geomagnetic-activity level, and as functions of various solar and solar wind properties. Three populations of substorm occurrences are seen: (1) quasiperiodically occurring substorms with recurrence times (waiting times) of 2-4 h, (2) randomly occurring substorms with recurrence times of about 6-15 h, and (3) long intervals wherein no substorms occur. A working model is suggested wherein (1) the period of periodic substorms is set by the magnetosphere with variations in the actual recurrence times caused by the need for a solar wind driving interval to occur, (2) the mesoscale structure of the solar wind magnetic field triggers the occurrence of the random substorms, and (3) the large-scale structure of the solar wind plasma is responsible for the long intervals wherein no substorms occur. Statistically, the recurrence period of periodically occurring substorms is slightly shorter when the ram pressure of the solar wind is high, when the magnetic field strength of the solar wind is strong, when the Mach number of the solar wind is low, and when the polar-cap potential saturation parameter is high.

  4. 4-Nonylphenol (NP) in food-contact materials: analytical methodology and occurrence.

    PubMed

    Fernandes, A R; Rose, M; Charlton, C

    2008-03-01

    Nonylphenol is a recognized environmental contaminant, but it is unclear whether its occurrence in food arises only through environmental pathways or also during the processing or packaging of food, as there are reports that indicate that materials in contact with food such as rubber products and polyvinylchloride wraps can contain nonylphenol. A review of the literature has highlighted the scarcity of robust analytical methodology or data on the occurrence of nonylphenol in packaging materials. This paper describes a methodology for the determination of nonylphenol in a variety of packaging materials, which includes plastics, paper and rubber. The method uses either Soxhlet extraction or dissolution followed by solvent extraction (depending on the material type), followed by purification using adsorption chromatography. Procedures were internally standardized using 13C-labelled nonylphenol and the analytes were measured by gas chromatography-mass spectrometry. The method is validated and data relating to quality parameters such as limits of detection, recovery, precision and linearity of measurement are provided. Analysis of a range of 25 food-contact materials found nonylphenol at concentrations of 64-287 microg g(-1) in some polystyrene and polyvinylchloride samples. Far lower concentrations (<0.03-1.4 microg g(-1)) were detected in the other materials. It is possible that occurrence at the higher levels has the potential for migration to food.

  5. Prediction of crime occurrence from multi-modal data using deep learning

    PubMed Central

    Kang, Hyeon-Woo

    2017-01-01

    In recent years, various studies have been conducted on the prediction of crime occurrences. This predictive capability is intended to assist in crime prevention by facilitating effective implementation of police patrols. Previous studies have used data from multiple domains such as demographics, economics, and education. Their prediction models treat data from different domains equally. These methods have problems in crime occurrence prediction, such as difficulty in discovering highly nonlinear relationships, redundancies, and dependencies between multiple datasets. In order to enhance crime prediction models, we consider environmental context information, such as broken windows theory and crime prevention through environmental design. In this paper, we propose a feature-level data fusion method with environmental context based on a deep neural network (DNN). Our dataset consists of data collected from various online databases of crime statistics, demographic and meteorological data, and images in Chicago, Illinois. Prior to generating training data, we select crime-related data by conducting statistical analyses. Finally, we train our DNN, which consists of the following four kinds of layers: spatial, temporal, environmental context, and joint feature representation layers. Coupled with crucial data extracted from various domains, our fusion DNN is a product of an efficient decision-making process that statistically analyzes data redundancy. Experimental performance results show that our DNN model is more accurate in predicting crime occurrence than other prediction models. PMID:28437486

  6. Prediction of crime occurrence from multi-modal data using deep learning.

    PubMed

    Kang, Hyeon-Woo; Kang, Hang-Bong

    2017-01-01

    In recent years, various studies have been conducted on the prediction of crime occurrences. This predictive capability is intended to assist in crime prevention by facilitating effective implementation of police patrols. Previous studies have used data from multiple domains such as demographics, economics, and education. Their prediction models treat data from different domains equally. These methods have problems in crime occurrence prediction, such as difficulty in discovering highly nonlinear relationships, redundancies, and dependencies between multiple datasets. In order to enhance crime prediction models, we consider environmental context information, such as broken windows theory and crime prevention through environmental design. In this paper, we propose a feature-level data fusion method with environmental context based on a deep neural network (DNN). Our dataset consists of data collected from various online databases of crime statistics, demographic and meteorological data, and images in Chicago, Illinois. Prior to generating training data, we select crime-related data by conducting statistical analyses. Finally, we train our DNN, which consists of the following four kinds of layers: spatial, temporal, environmental context, and joint feature representation layers. Coupled with crucial data extracted from various domains, our fusion DNN is a product of an efficient decision-making process that statistically analyzes data redundancy. Experimental performance results show that our DNN model is more accurate in predicting crime occurrence than other prediction models.

  7. Sill induced hydrothermal venting: A summary of our current understanding

    NASA Astrophysics Data System (ADS)

    Jerram, Dougal; Svenesn, Henrik; Planke, Sverre; Millett, John; Reynolds, Pete

    2017-04-01

    Hydrothermal vent structures which are predominantly related with the emplacement of large (>1000 km3) intrusions into the sub-volcanic basins represent a specific style of piercement structure, where climate-forcing gases can be transferred into the atmosphere and hydrosphere. In this case, the types and volumes of gas produced by intrusions is heavily dependent on the host-rock sediment properties that they intrude through. The distribution of vent structures can be shown to be widespread in Large Igneous Provinces for example on both the Norwegian and the Greenland margins of the North Atlantic Igneous Province (NAIP). In this overview we assess the distribution, types and occurrence of hydrothermal vent structures associated with LIPs. There is particular focus on those within the NAIP using mapped examples from offshore seismic data as well as outcrop analogues, highlighting the variability of these structures and their deposits. As the availability of 3D data from offshore and onshore increases, the full nature of the volcanic stratigraphy from the subvolcanic intrusive complexes, through the main eruption cycles into the piercing vent structures, can be realised along the entirety of volcanic rifted margins and LIPs. This will help greatly in our understanding of the evolving palaeo-environments, and climate contributions during the evolution of these short lived massive volcanic events.

  8. Modeling forest fire occurrences using count-data mixed models in Qiannan autonomous prefecture of Guizhou province in China.

    PubMed

    Xiao, Yundan; Zhang, Xiongqing; Ji, Ping

    2015-01-01

    Forest fires can cause catastrophic damage on natural resources. In the meantime, it can also bring serious economic and social impacts. Meteorological factors play a critical role in establishing conditions favorable for a forest fire. Effective prediction of forest fire occurrences could prevent or minimize losses. This paper uses count data models to analyze fire occurrence data which is likely to be dispersed and frequently contain an excess of zero counts (no fire occurrence). Such data have commonly been analyzed using count data models such as a Poisson model, negative binomial model (NB), zero-inflated models, and hurdle models. Data we used in this paper is collected from Qiannan autonomous prefecture of Guizhou province in China. Using the fire occurrence data from January to April (spring fire season) for the years 1996 through 2007, we introduced random effects to the count data models. In this study, the results indicated that the prediction achieved through NB model provided a more compelling and credible inferential basis for fitting actual forest fire occurrence, and mixed-effects model performed better than corresponding fixed-effects model in forest fire forecasting. Besides, among all meteorological factors, we found that relative humidity and wind speed is highly correlated with fire occurrence.

  9. Modeling Forest Fire Occurrences Using Count-Data Mixed Models in Qiannan Autonomous Prefecture of Guizhou Province in China

    PubMed Central

    Ji, Ping

    2015-01-01

    Forest fires can cause catastrophic damage on natural resources. In the meantime, it can also bring serious economic and social impacts. Meteorological factors play a critical role in establishing conditions favorable for a forest fire. Effective prediction of forest fire occurrences could prevent or minimize losses. This paper uses count data models to analyze fire occurrence data which is likely to be dispersed and frequently contain an excess of zero counts (no fire occurrence). Such data have commonly been analyzed using count data models such as a Poisson model, negative binomial model (NB), zero-inflated models, and hurdle models. Data we used in this paper is collected from Qiannan autonomous prefecture of Guizhou province in China. Using the fire occurrence data from January to April (spring fire season) for the years 1996 through 2007, we introduced random effects to the count data models. In this study, the results indicated that the prediction achieved through NB model provided a more compelling and credible inferential basis for fitting actual forest fire occurrence, and mixed-effects model performed better than corresponding fixed-effects model in forest fire forecasting. Besides, among all meteorological factors, we found that relative humidity and wind speed is highly correlated with fire occurrence. PMID:25790309

  10. Impacts of Climate Change On The Occurrence of Extreme Events: The Mice Project

    NASA Astrophysics Data System (ADS)

    Palutikof, J. P.; Mice Team

    It is widely accepted that climate change due to global warming will have substan- tial impacts on the natural environment, and on human activities. Furthermore, it is increasingly recognized that changes in the severity and frequency of extreme events, such as windstorm and flood, are likely to be more important than changes in the average climate. The EU-funded project MICE (Modelling the Impacts of Climate Extremes) commenced in January 2002. It seeks to identify the likely changes in the occurrence of extremes of rainfall, temperature and windstorm due to global warm- ing, using information from climate models as a basis, and to study the impacts of these changes in selected European environments. The objectives are: a) to evaluate, by comparison with gridded and station observations, the ability of climate models to successfully reproduce the occurrence of extremes at the required spatial and temporal scales. b) to analyse model output with respect to future changes in the occurrence of extremes. Statistical analyses will determine changes in (i) the return periods of ex- tremes, (ii) the joint probability of extremes (combinations of damaging events such as windstorm followed by heavy rain), (iii) the sequential behaviour of extremes (whether events are well-separated or clustered) and (iv) the spatial patterns of extreme event occurrence across Europe. The range of uncertainty in model predictions will be ex- plored by analysing changes in model experiments with different spatial resolutions and forcing scenarios. c) to determine the impacts of the predicted changes in extremes occurrence on selected activity sectors: agriculture (Mediterranean drought), commer- cial forestry and natural forest ecosystems (windstorm and flood in northern Europe, fire in the Mediterranean), energy use (temperature extremes), tourism (heat stress and Mediterranean beach holidays, changes in the snow pack and winter sports ) and civil protection/insurance (windstorm and flood

  11. Relative effects of climatic and local factors on fire occurrence in boreal forest landscapes of northeastern China.

    PubMed

    Wu, Zhiwei; He, Hong S; Yang, Jian; Liu, Zhihua; Liang, Yu

    2014-09-15

    Fire significantly affects species composition, structure, and ecosystem processes in boreal forests. Our study objective was to identify the relative effects of climate, vegetation, topography, and human activity on fire occurrence in Chinese boreal forest landscapes. We used historical fire ignition for 1966-2005 and the statistical method of Kernel Density Estimation to derive fire-occurrence density (number of fires/km(2)). The Random Forest models were used to quantify the relative effects of climate, vegetation, topography, and human activity on fire-occurrence density. Our results showed that fire-occurrence density tended to be spatially clustered. Human-caused fire occurrence was highly clustered at the southern part of the region, where human population density is high (comprising about 75% of the area's population). In the north-central areas where elevations are the highest in the region and less densely populated, lightning-caused fires were clustered. Climate factors (e.g., fine fuel and duff moisture content) were important at both regional and landscape scales. Human activity factors (e.g., distance to nearest settlement and road) were secondary to climate as the primary fire occurrence factors. Predictions of fire regimes often assume a strong linkage between climate and fire but usually with less emphasis placed on the effects of local factors such as human activity. We therefore suggest that accurate forecasting of fire regime should include human influences such as those measured by forest proximity to roads and human settlements. Copyright © 2014 Elsevier B.V. All rights reserved.

  12. Normal and compound poisson approximations for pattern occurrences in NGS reads.

    PubMed

    Zhai, Zhiyuan; Reinert, Gesine; Song, Kai; Waterman, Michael S; Luan, Yihui; Sun, Fengzhu

    2012-06-01

    Next generation sequencing (NGS) technologies are now widely used in many biological studies. In NGS, sequence reads are randomly sampled from the genome sequence of interest. Most computational approaches for NGS data first map the reads to the genome and then analyze the data based on the mapped reads. Since many organisms have unknown genome sequences and many reads cannot be uniquely mapped to the genomes even if the genome sequences are known, alternative analytical methods are needed for the study of NGS data. Here we suggest using word patterns to analyze NGS data. Word pattern counting (the study of the probabilistic distribution of the number of occurrences of word patterns in one or multiple long sequences) has played an important role in molecular sequence analysis. However, no studies are available on the distribution of the number of occurrences of word patterns in NGS reads. In this article, we build probabilistic models for the background sequence and the sampling process of the sequence reads from the genome. Based on the models, we provide normal and compound Poisson approximations for the number of occurrences of word patterns from the sequence reads, with bounds on the approximation error. The main challenge is to consider the randomness in generating the long background sequence, as well as in the sampling of the reads using NGS. We show the accuracy of these approximations under a variety of conditions for different patterns with various characteristics. Under realistic assumptions, the compound Poisson approximation seems to outperform the normal approximation in most situations. These approximate distributions can be used to evaluate the statistical significance of the occurrence of patterns from NGS data. The theory and the computational algorithm for calculating the approximate distributions are then used to analyze ChIP-Seq data using transcription factor GABP. Software is available online (www

  13. Idaho National Laboratory Quarterly Occurrence Analysis - 3rd Quarter FY-2016

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Lisbeth Ann

    This report is published quarterly by the Idaho National Laboratory (INL) Quality and Performance Management Organization. The Department of Energy (DOE) Occurrence Reporting and Processing System (ORPS), as prescribed in DOE Order 232.2, “Occurrence Reporting and Processing of Operations Information,” requires a quarterly analysis of events, both reportable and not reportable, for the previous 12 months. This report is the analysis of 73 reportable events (23 from the 3rd Qtr FY-16 and 50 from the prior three reporting quarters), as well as 45 other issue reports (including events found to be not reportable and Significant Category A and B conditions)more » identified at INL during the past 12 months (16 from this quarter and 29 from the prior three quarters).« less

  14. Idaho National Laboratory Quarterly Occurrence Analysis - 1st Quarter FY 2016

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Lisbeth Ann

    This report is published quarterly by the Idaho National Laboratory (INL) Quality and Performance Management Organization. The Department of Energy (DOE) Occurrence Reporting and Processing System (ORPS), as prescribed in DOE Order 232.2, “Occurrence Reporting and Processing of Operations Information,” requires a quarterly analysis of events, both reportable and not reportable, for the previous 12 months. This report is the analysis of 74 reportable events (16 from the 1st Qtr FY-16 and 58 from the prior three reporting quarters), as well as 35 other issue reports (including events found to be not reportable and Significant Category A and B conditions)more » identified at INL during the past 12 months (15 from this quarter and 20 from the prior three quarters).« less

  15. Idaho National Laboratory Quarterly Occurrence Analysis 4th Quarter FY 2016

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Lisbeth Ann

    This report is published quarterly by the Idaho National Laboratory (INL) Quality and Performance Management Organization. The Department of Energy (DOE) Occurrence Reporting and Processing System, as prescribed in DOE Order 232.2, “Occurrence Reporting and Processing of Operations Information,” requires a quarterly analysis of events, both reportable and not reportable, for the previous 12 months. This report is the analysis of 84 reportable events (29 from the 4th quarter fiscal year 2016 and 55 from the prior three reporting quarters), as well as 39 other issue reports (including events found to be not reportable and Significant Category A and Bmore » conditions) identified at INL during the past 12 months (two from this quarter and 37 from the prior three quarters).« less

  16. The Occurrence of 16 EPA PAHs in Food – A Review

    PubMed Central

    Zelinkova, Zuzana; Wenzl, Thomas

    2015-01-01

    Occurrence and toxicity of polycyclic aromatic hydrocarbons (PAHs) have been extensively studied in countries all over the world. PAHs generally occur in complex mixtures which may consist of hundreds of compounds. The U.S. Environmental Protection Agency (EPA) proposed in the 1970 to monitor a set of 16 PAHs which are frequently found in environmental samples. This article reviews the suitability of the 16 EPA PAHs for the assessment of potential health threats to humans stemming from the exposure to PAHs by food ingestion. It presents details on analysis methods, the occurrence of PAHs in food, regulatory aspects, and related risk management approaches. In addition, consideration is given to newer evaluations of the toxicity of PAHs and the requirements for risk assessment and management stemming from them. PMID:26681897

  17. How well can we predict forage species occurrence and abundance?

    USDA-ARS?s Scientific Manuscript database

    As part of a larger effort focused on forage species production and management, we have been developing a statistical modeling approach to predict the probability of species occurrence and the abundance for Orchard Grass over the Northeast region of the United States using two selected statistical m...

  18. Using Co-Occurrence to Evaluate Belief Coherence in a Large Non Clinical Sample

    PubMed Central

    Pechey, Rachel; Halligan, Peter

    2012-01-01

    Much of the recent neuropsychological literature on false beliefs (delusions) has tended to focus on individual or single beliefs, with few studies actually investigating the relationship or co-occurrence between different types of co-existing beliefs. Quine and Ullian proposed the hypothesis that our beliefs form an interconnected web in which the beliefs that make up that system must somehow “cohere” with one another and avoid cognitive dissonance. As such beliefs are unlikely to be encapsulated (i.e., exist in isolation from other beliefs). The aim of this preliminary study was to empirically evaluate the probability of belief co-occurrence as one indicator of coherence in a large sample of subjects involving three different thematic sets of beliefs (delusion-like, paranormal & religious, and societal/cultural). Results showed that the degree of belief co-endorsement between beliefs within thematic groupings was greater than random occurrence, lending support to Quine and Ullian’s coherentist account. Some associations, however, were relatively weak, providing for well-established examples of cognitive dissonance. PMID:23155383

  19. Root causes occurrence of low BIM adoption in Malaysia: System dynamics modelling approach

    NASA Astrophysics Data System (ADS)

    Mamter, Shahela; Aziz, Abdul Rashid Abdul; Zulkepli, Jafri

    2017-11-01

    The global implementation of BIM in the construction field is increasing worldwide. Due to the advantages offered by BIM, its implementation is considered important in the construction projects. Nevertheless, the Construction Industry Transformation Plan has reported that the adoption of Building Information Modelling (BIM) in Malaysia is still low and it is estimated at only 10 percent adoption amongst construction stake players. The barriers influencing the occurrence of low adoption BIM in Malaysia have been studied by some researchers. However, these researchers did not investigate the root causes which might lead to the recurring of the barriers to BIM adoption. Root causes that immediately occurrence of barriers, also known as precipitants or trigger causes. This conceptual paper developed the causal loop diagram (CLD) which presents the relationship between the perceived variables using system dynamic modelling approach. The findings revealed a novelty validated diagrams that design the holistic dynamic relationship on the root causes occurrence of low BIM adoption. Nonetheless, the diagram subject to more empirical testing for its practicability and further refinement upon more results expected to emerge as the research progresses.

  20. Sea ice occurrence predicts genetic isolation in the Arctic fox.

    PubMed

    Geffen, Eli; Waidyaratne, Sitara; Dalén, Love; Angerbjörn, Anders; Vila, Carles; Hersteinsson, Pall; Fuglei, Eva; White, Paula A; Goltsman, Michael; Kapel, Christian M O; Wayne, Robert K

    2007-10-01

    Unlike Oceanic islands, the islands of the Arctic Sea are not completely isolated from migration by terrestrial vertebrates. The pack ice connects many Arctic Sea islands to the mainland during winter months. The Arctic fox (Alopex lagopus), which has a circumpolar distribution, populates numerous islands in the Arctic Sea. In this study, we used genetic data from 20 different populations, spanning the entire distribution of the Arctic fox, to identify barriers to dispersal. Specifically, we considered geographical distance, occurrence of sea ice, winter temperature, ecotype, and the presence of red fox and polar bear as nonexclusive factors that influence the dispersal behaviour of individuals. Using distance-based redundancy analysis and the BIOENV procedure, we showed that occurrence of sea ice is the key predictor and explained 40-60% of the genetic distance among populations. In addition, our analysis identified the Commander and Pribilof Islands Arctic populations as genetically unique suggesting they deserve special attention from a conservation perspective.

  1. Methods for analysis of the occurrence of abscess in patients with pancreatitis.

    PubMed

    Roca-Antonio, J; Escudero, L E; Gener, J; Oller, B; Rodríguez, N; Muñoz, A

    1997-01-01

    Standard survival analysis methods are useful for data involving censored cases when cures do not generally occur. If the object is to study, for instance, the development of a complication in the progress of an infectious disease, some people may be cured before complications develop. In this article, we provide methods for the analysis of data when cures do occur. An example is a study of prognostic factors for pancreatic abscess in patients with pancreatitis, some of whom leave the risk set because the pancreatitis clears. We present methods for estimating the survival curves and comparing hazard function for two objectives: (1) the occurrence of an abscess, irrespective of whether the patients are cured or not, and (2) the occurrence of an abscess for patients who, at that stage, have not been cured. We illustrate the applications of the methods using a sample of 50 patients with severe pancreatitis. To study the occurrence of an abscess, regardless of whether the patients are cured or not, we show that the appropriate strategy is to assign to the cured patients an infinite time to the appearance of an abscess. If the cured were considered censored at the moment the pancreatitis cleared, this would result in an overestimation of the hazard of presenting an abscess. On the other hand, if the objective is to compare the occurrence of abscess according to an exposure for patients who have not been cured, one needs to censor the cured patients at the time they are cured. For the analysis of survival data in the context of infectious diseases when cure is possible, it is important to use a censoring strategy that is pertinent to the specific aims of the study. Considering cures as censored at the time of cure is not always appropriate.

  2. Predicting Spike Occurrence and Neuronal Responsiveness from LFPs in Primary Somatosensory Cortex

    PubMed Central

    Storchi, Riccardo; Zippo, Antonio G.; Caramenti, Gian Carlo; Valente, Maurizio; Biella, Gabriele E. M.

    2012-01-01

    Local Field Potentials (LFPs) integrate multiple neuronal events like synaptic inputs and intracellular potentials. LFP spatiotemporal features are particularly relevant in view of their applications both in research (e.g. for understanding brain rhythms, inter-areal neural communication and neronal coding) and in the clinics (e.g. for improving invasive Brain-Machine Interface devices). However the relation between LFPs and spikes is complex and not fully understood. As spikes represent the fundamental currency of neuronal communication this gap in knowledge strongly limits our comprehension of neuronal phenomena underlying LFPs. We investigated the LFP-spike relation during tactile stimulation in primary somatosensory (S-I) cortex in the rat. First we quantified how reliably LFPs and spikes code for a stimulus occurrence. Then we used the information obtained from our analyses to design a predictive model for spike occurrence based on LFP inputs. The model was endowed with a flexible meta-structure whose exact form, both in parameters and structure, was estimated by using a multi-objective optimization strategy. Our method provided a set of nonlinear simple equations that maximized the match between models and true neurons in terms of spike timings and Peri Stimulus Time Histograms. We found that both LFPs and spikes can code for stimulus occurrence with millisecond precision, showing, however, high variability. Spike patterns were predicted significantly above chance for 75% of the neurons analysed. Crucially, the level of prediction accuracy depended on the reliability in coding for the stimulus occurrence. The best predictions were obtained when both spikes and LFPs were highly responsive to the stimuli. Spike reliability is known to depend on neuron intrinsic properties (i.e. on channel noise) and on spontaneous local network fluctuations. Our results suggest that the latter, measured through the LFP response variability, play a dominant role. PMID:22586452

  3. Predicting spike occurrence and neuronal responsiveness from LFPs in primary somatosensory cortex.

    PubMed

    Storchi, Riccardo; Zippo, Antonio G; Caramenti, Gian Carlo; Valente, Maurizio; Biella, Gabriele E M

    2012-01-01

    Local Field Potentials (LFPs) integrate multiple neuronal events like synaptic inputs and intracellular potentials. LFP spatiotemporal features are particularly relevant in view of their applications both in research (e.g. for understanding brain rhythms, inter-areal neural communication and neuronal coding) and in the clinics (e.g. for improving invasive Brain-Machine Interface devices). However the relation between LFPs and spikes is complex and not fully understood. As spikes represent the fundamental currency of neuronal communication this gap in knowledge strongly limits our comprehension of neuronal phenomena underlying LFPs. We investigated the LFP-spike relation during tactile stimulation in primary somatosensory (S-I) cortex in the rat. First we quantified how reliably LFPs and spikes code for a stimulus occurrence. Then we used the information obtained from our analyses to design a predictive model for spike occurrence based on LFP inputs. The model was endowed with a flexible meta-structure whose exact form, both in parameters and structure, was estimated by using a multi-objective optimization strategy. Our method provided a set of nonlinear simple equations that maximized the match between models and true neurons in terms of spike timings and Peri Stimulus Time Histograms. We found that both LFPs and spikes can code for stimulus occurrence with millisecond precision, showing, however, high variability. Spike patterns were predicted significantly above chance for 75% of the neurons analysed. Crucially, the level of prediction accuracy depended on the reliability in coding for the stimulus occurrence. The best predictions were obtained when both spikes and LFPs were highly responsive to the stimuli. Spike reliability is known to depend on neuron intrinsic properties (i.e. on channel noise) and on spontaneous local network fluctuations. Our results suggest that the latter, measured through the LFP response variability, play a dominant role.

  4. The preventive effects of lifestyle intervention on the occurrence of diabetes mellitus and acute myocardial infarction in metabolic syndrome.

    PubMed

    Kim, D; Yoon, S-J; Lim, D-S; Gong, Y-H; Ko, S; Lee, Y-H; Lee, H S; Park, M-S; Kim, K-H; Kim, Y A

    2016-10-01

    Metabolic syndrome (MS), as a precursor of diabetes mellitus (DM) and cardiovascular disease, is increasing steadily worldwide. We examined the preventive effects of lifestyle intervention on the occurrence of DM and acute myocardial infarction (AMI) in MS. Observational study on disease occurrence after lifestyle intervention. The lifestyle intervention was administered to subjects with MS participating in a metropolitan lifestyle intervention program for 1 year. The same numbers of non-participating age- and sex-matched subjects with MS were randomly extracted from national health examination data. After intervention or examination, new occurrences of hypertension, DM, and AMI were identified through the national health insurance claims data during 1 year. For DM and AMI, multivariate logistic regression analysis for the factors affecting each disease was performed. In the intervention group and the control group (14,918 in each group), the occurrence of hypertension was 555 (6.07%) and 751 (8.33%), the occurrence of DM was 324 (2.55%) and 488 (3.89%), the occurrence of dyslipidemia was 321 (2.59%) and 373 (2.72%), and the occurrence of AMI was 13 (0.09%) and 26 (0.17%), respectively. In multivariate logistic regression analysis, adjusted odds ratios for intervention were 0.752 (95% confidence interval [CI]: 0.644-0.879) and 0.499 (95% CI: 0.251-0.992) for DM and AMI, respectively, indicating that lifestyle intervention has a preventive effect. Lifestyle intervention in MS has preventive effects on the occurrence of DM and AMI, and long-term follow-up is needed to evaluate these preventive effects in more detail. Copyright © 2016. Published by Elsevier Ltd.

  5. Stormtime substorm onsets: occurrence and flow channel triggering

    NASA Astrophysics Data System (ADS)

    Lyons, Larry R.; Zou, Ying; Nishimura, Yukitoshi; Gallardo-Lacourt, Bea; Angelopulos, Vassilis; Donovan, Eric F.

    2018-05-01

    Bright auroral emissions during geomagnetic storms provide a good opportunity for testing the proposal that substorm onset is frequently triggered by plasma sheet flow bursts that are manifested in the ionosphere as auroral streamers. We have used the broad coverage of the ionospheric mapping of the plasma sheet offered by the high-resolution THEMIS all-sky-imagers (ASIs) and chose the main phases of 9 coronal mass ejection (CME) related and 9 high-speed stream (HSS)-related geomagnetic storms, and identified substorm auroral onsets defined as brightening followed by poleward expansion. We found a detectable streamer heading to near the substorm onset location for all 60 onsets that we identified and were observed well by the ASIs. This indicates that substorm onsets are very often triggered by the intrusion of plasma with lower entropy than the surrounding plasma to the onset region, with the caveat that the ASIs do not give a direct measure of the intruding plasma. The majority of the triggering streamers are "tilted streamers," which extend eastward as their eastern tip tilts equatorward to near the substorm onset location. Fourteen of the 60 cases were identified as "Harang streamers," where the streamer discernibly turns toward the west poleward of reaching to near the onset latitude, indicating flow around the Harang reversal. Using the ASI observations, we observed substantially less substorm onsets for CME storms than for HSS storms, a result in disagreement with a recent finding of approximately equal substorm occurrences. We suggest that this difference is a result of strong non-substorm streamers that give substorm-like signatures in ground magnetic field observations but are not substorms based on their auroral signature. Our results from CME storms with steady, strong southward IMF are not consistent with the 2-4 h repetition of substorms that has been suggested for moderate to strong southward IMF conditions. Instead, our results indicate

  6. Network analysis reveals seasonal variation of co-occurrence correlations between Cyanobacteria and other bacterioplankton.

    PubMed

    Zhao, Dayong; Shen, Feng; Zeng, Jin; Huang, Rui; Yu, Zhongbo; Wu, Qinglong L

    2016-12-15

    Association network approaches have recently been proposed as a means for exploring the associations between bacterial communities. In the present study, high-throughput sequencing was employed to investigate the seasonal variations in the composition of bacterioplankton communities in six eutrophic urban lakes of Nanjing City, China. Over 150,000 16S rRNA sequences were derived from 52 water samples, and correlation-based network analyses were conducted. Our results demonstrated that the architecture of the co-occurrence networks varied in different seasons. Cyanobacteria played various roles in the ecological networks during different seasons. Co-occurrence patterns revealed that members of Cyanobacteria shared a very similar niche and they had weak positive correlations with other phyla in summer. To explore the effect of environmental factors on species-species co-occurrence networks and to determine the most influential environmental factors, the original positive network was simplified by module partitioning and by calculating module eigengenes. Module eigengene analysis indicated that temperature only affected some Cyanobacteria; the rest were mainly affected by nitrogen associated factors throughout the year. Cyanobacteria were dominant in summer which may result from strong co-occurrence patterns and suitable living conditions. Overall, this study has improved our understanding of the roles of Cyanobacteria and other bacterioplankton in ecological networks. Copyright © 2016 Elsevier B.V. All rights reserved.

  7. Predictors, spatial distribution, and occurrence of woody invasive plants in subtropical urban ecosystems.

    PubMed

    Staudhammer, Christina L; Escobedo, Francisco J; Holt, Nathan; Young, Linda J; Brandeis, Thomas J; Zipperer, Wayne

    2015-05-15

    We examined the spatial distribution, occurrence, and socioecological predictors of woody invasive plants (WIP) in two subtropical, coastal urban ecosystems: San Juan, Puerto Rico and Miami-Dade, United States. These two cities have similar climates and ecosystems typical of subtropical regions but differ in socioeconomics, topography, and urbanization processes. Using permanent plot data, available forest inventory protocols and statistical analyses of geographic and socioeconomic spatial predictors, we found that landscape level distribution and occurrence of WIPs was not clustered. We also characterized WIP composition and occurrence using logistic models, and found they were strongly related to the proportional area of residential land uses. However, the magnitude and trend of increase depended on median household income and grass cover. In San Juan, WIP occurrence was higher in areas of high residential cover when incomes were low or grass cover was low, whereas the opposite was true in Miami-Dade. Although Miami-Dade had greater invasive shrub cover and numbers of WIP species, San Juan had far greater invasive tree density, basal area and crown cover. This study provides an approach for incorporating field and available census data in geospatial distribution models of WIPs in cities throughout the globe. Findings indicate that identifying spatial predictors of WIPs depends on site-specific factors and the ecological scale of the predictor. Thus, mapping protocols and policies to eradicate urban WIPs should target indicators of a relevant scale specific to the area of interest for their improved and proactive management. Copyright © 2015 Elsevier Ltd. All rights reserved.

  8. Occurrence of nitrosamines and their precursors in drinking water systems around mainland China.

    PubMed

    Bei, Er; Shu, Yuanyuan; Li, Shixiang; Liao, Xiaobin; Wang, Jun; Zhang, Xiaojian; Chen, Chao; Krasner, Stuart

    2016-07-01

    N-Nitrosamines (NAs) in drinking water have attracted considerable attention in recent years due to their high carcinogenicity, frequent occurrence, and their potential regulation. During the past three years, we have collected about 164 water samples of finished water, tap water, and source water from 23 provinces, 44 cities from large cities to small towns, and 155 sampling points all over China. The occurrence of NAs in the finished and tap water was much higher in China than that in the U.S. Nine NAs were measured and NDMA had the highest concentration. The occurrence of NDMA was in 33% of the finished waters of water treatment plants and in 41% of the tap waters. The average NDMA concentration in finished and tap waters was 11 and 13 ng/L, respectively. Formation potentials (FPs) of source waters were examined with an average NDMA FP of 66 ng/L. Large variations in NA occurrence were observed geographically in China and temporally in different seasons. The Yangtze River Delta area, one sub-area in East China, had the highest concentrations of NAs, where the average NDMA concentrations in the finished and tap water were 27 and 28.5 ng/L, respectively, and the average NDMA FP in the source water was 204 ng/L. NA control may be achieved by applying breakpoint free chlorination and/or advanced treatment of ozone - granular activated carbon process to remove the NA precursors before disinfection. Copyright © 2016 Elsevier Ltd. All rights reserved.

  9. Palaeoenvironmental drivers of vertebrate community composition in the Belly River Group (Campanian) of Alberta, Canada, with implications for dinosaur biogeography.

    PubMed

    Cullen, Thomas M; Evans, David C

    2016-11-15

    The Belly River Group of southern Alberta is one of the best-sampled Late Cretaceous terrestrial faunal assemblages in the world. This system provides a high-resolution biostratigraphic record of terrestrial vertebrate diversity and faunal turnover, and it has considerable potential to be a model system for testing hypotheses of dinosaur palaeoecological dynamics, including important aspects of palaeoecommunity structure, trophic interactions, and responses to environmental change. Vertebrate fossil microsites (assemblages of small bones and teeth concentrated together over a relatively short time and thought to be representative of community composition) offer an unparalleled dataset to better test these hypotheses by ameliorating problems of sample size, geography, and chronostratigraphic control that hamper other palaeoecological analyses. Here, we assembled a comprehensive relative abundance dataset of microsites sampled from the entire Belly River Group and performed a series of analyses to test the influence of environmental factors on site and taxon clustering, and assess the stability of faunal assemblages both temporally and spatially. We also test the long-held idea that populations of large dinosaur taxa were particularly sensitive to small-scale environmental gradients, such as the paralic (coastal) to alluvial (inland) regimes present within the time-equivalent depositional basin of the upper Oldman and lower Dinosaur Park Formations. Palaeoenvironment (i.e. reconstructed environmental conditions, related to relative amount of alluvial, fluvial, and coastal influence in associated sedimentary strata) was found to be strongly associated with clustering of sites by relative-abundance faunal assemblages, particularly in relation to changes in faunal assemblage composition and marine-terrestrial environmental transitions. Palaeogeography/palaeolandscape were moderately associated to site relative abundance assemblage clustering, with depositional setting

  10. Occurrence and average behavior of pulsating aurora

    NASA Astrophysics Data System (ADS)

    Partamies, N.; Whiter, D.; Kadokura, A.; Kauristie, K.; Nesse Tyssøy, H.; Massetti, S.; Stauning, P.; Raita, T.

    2017-05-01

    Motivated by recent event studies and modeling efforts on pulsating aurora, which conclude that the precipitation energy during these events is high enough to cause significant chemical changes in the mesosphere, this study looks for the bulk behavior of auroral pulsations. Based on about 400 pulsating aurora events, we outline the typical duration, geomagnetic conditions, and change in the peak emission height for the events. We show that the auroral peak emission height for both green and blue emission decreases by about 8 km at the start of the pulsating aurora interval. This brings the hardest 10% of the electrons down to about 90 km altitude. The median duration of pulsating aurora is about 1.4 h. This value is a conservative estimate since in many cases the end of event is limited by the end of auroral imaging for the night or the aurora drifting out of the camera field of view. The longest durations of auroral pulsations are observed during events which start within the substorm recovery phases. As a result, the geomagnetic indices are not able to describe pulsating aurora. Simultaneous Antarctic auroral images were found for 10 pulsating aurora events. In eight cases auroral pulsations were seen in the southern hemispheric data as well, suggesting an equatorial precipitation source and a frequent interhemispheric occurrence. The long lifetimes of pulsating aurora, their interhemispheric occurrence, and the relatively high-precipitation energies make this type of aurora an effective energy deposition process which is easy to identify from the ground-based image data.

  11. Environmental Factors Affecting Brook Trout Occurrence in Headwater Stream Segments

    Treesearch

    Yoichiro Kanno; Benjamin H. Letcher; Ana L. Rosner; Kyle P. O' Neil; Keith H. Nislow

    2015-01-01

    We analyzed the associations of catchment-scale and riparian-scale environmental factors with occurrence of Brook Trout Salvelinus fontinalis in Connecticut headwater stream segments with catchment areas of 15 < km2. A hierarchical Bayesian approach was applied to a statewide stream survey data set, in which Brook...

  12. On the Occurrence of Standardized Regression Coefficients Greater than One.

    ERIC Educational Resources Information Center

    Deegan, John, Jr.

    1978-01-01

    It is demonstrated here that standardized regression coefficients greater than one can legitimately occur. Furthermore, the relationship between the occurrence of such coefficients and the extent of multicollinearity present among the set of predictor variables in an equation is examined. Comments on the interpretation of these coefficients are…

  13. Cause of different local time distribution in the postsunset equatorial ionospheric irregularity occurrences between June and December solstices

    NASA Astrophysics Data System (ADS)

    Su, S.-Y.; Chao, C. K.; Liu, C. H.

    2009-04-01

    Global averaged postsunset equatorial ionospheric density irregularity occurrences observed by ROCSAT during the moderate to high solar activity years of 1999 to 2004 indicate a different local time distribution between June and December solstices. The irregularity occurrences during the December solstice show a faster increase rate to peak at 2100-2200 local time, while the irregularity occurrences during the June solstice have a slower increase rate and peak one hour later in local time than that in the December solstice. The cause of such different local time distributions is attributed to a large contrast in the time of zonal drift reversal and the magnitude of postsunset vertical drift observed by ROCSAT at longitudes of large magnetic declination in the two solstices. That is, a delay in the zonal drift reversal in association with a smaller postsunset vertical drift observed at longitudes of positive magnetic declination has greatly inhibited the irregularity occurrences during the June solstice in contrast to an earlier zonal drift reversal together with a large vertical drift occurring at longitudes of negative magnetic declination to accelerate the irregularity occurrences during the December solstice. We think that the different geomagnetic field strengths that existed between the longitudes of positive and negative magnetic declinations have played a crucial role in determining the different local time distributions of irregularity occurrences for the two solstices.

  14. Modeling Geometric-Temporal Context With Directional Pyramid Co-Occurrence for Action Recognition.

    PubMed

    Yuan, Chunfeng; Li, Xi; Hu, Weiming; Ling, Haibin; Maybank, Stephen J

    2014-02-01

    In this paper, we present a new geometric-temporal representation for visual action recognition based on local spatio-temporal features. First, we propose a modified covariance descriptor under the log-Euclidean Riemannian metric to represent the spatio-temporal cuboids detected in the video sequences. Compared with previously proposed covariance descriptors, our descriptor can be measured and clustered in Euclidian space. Second, to capture the geometric-temporal contextual information, we construct a directional pyramid co-occurrence matrix (DPCM) to describe the spatio-temporal distribution of the vector-quantized local feature descriptors extracted from a video. DPCM characterizes the co-occurrence statistics of local features as well as the spatio-temporal positional relationships among the concurrent features. These statistics provide strong descriptive power for action recognition. To use DPCM for action recognition, we propose a directional pyramid co-occurrence matching kernel to measure the similarity of videos. The proposed method achieves the state-of-the-art performance and improves on the recognition performance of the bag-of-visual-words (BOVWs) models by a large margin on six public data sets. For example, on the KTH data set, it achieves 98.78% accuracy while the BOVW approach only achieves 88.06%. On both Weizmann and UCF CIL data sets, the highest possible accuracy of 100% is achieved.

  15. Linking management effectiveness indicators to observed effects of protected areas on fire occurrence in the Amazon rainforest.

    PubMed

    Nolte, Christoph; Agrawal, Arun

    2013-02-01

    Management-effectiveness scores are used widely by donors and implementers of conservation projects to prioritize, track, and evaluate investments in protected areas. However, there is little evidence that these scores actually reflect the capacity of protected areas to deliver conservation outcomes. We examined the relation between indicators of management effectiveness in protected areas and the effectiveness of protected areas in reducing fire occurrence in the Amazon rainforest. We used data collected with the Management Effectiveness Tracking Tool (METT) scorecard, adopted by some of the world's largest conservation organizations to track management characteristics believed to be crucial for protected-area effectiveness. We used the occurrence of forest fires from 2000 through 2010 as a measure of the effect of protected areas on undesired land-cover change in the Amazon basin. We used matching to compare the estimated effect of protected areas with low versus high METT scores on fire occurrence. We also estimated effects of individual protected areas on fire occurrence and explored the relation between these effects and METT scores. The relations between METT scores and effects of protected areas on fire occurrence were weak. Protected areas with higher METT scores in 2005 did not seem to have performed better than protected areas with lower METT scores at reducing fire occurrence over the last 10 years. Further research into the relations between management-effectiveness indicators and conservation outcomes in protected areas seems necessary, and our results show that the careful application of matching methods can be a suitable method for that purpose. ©2012 Society for Conservation Biology.

  16. Co-occurrence and clustering of health conditions at age 11: cross-sectional findings from the Millennium Cohort Study

    PubMed Central

    Hesketh, Kathryn R; Fagg, James; Muniz-Terrera, Graciela; Law, Catherine; Hope, Steven

    2016-01-01

    Objectives To identify patterns of co-occurrence and clustering of 6 common adverse health conditions in 11-year-old children and explore differences by sociodemographic factors. Design Nationally representative prospective cohort study. Setting Children born in the UK between 2000 and 2002. Participants 11 399 11-year-old singleton children for whom data on all 6 health conditions and sociodemographic information were available (complete cases). Main outcome measures Prevalence, co-occurrence and clustering of 6 common health conditions: wheeze; eczema; long-standing illness (excluding wheeze and eczema); injury; socioemotional difficulties (measured using Strengths and Difficulties Questionnaire) and unfavourable weight (thin/overweight/obese vs normal). Results 42.4% of children had 2 or more adverse health conditions (co-occurrence). Co-occurrence was more common in boys and children from lower income households. Latent class analysis identified 6 classes: ‘normative’ (57.4%): ‘atopic burdened’ (14.0%); ‘socioemotional burdened’ (11.0%); ‘unfavourable weight/injury’ (7.7%); ‘eczema/injury’ (6.0%) and ‘eczema/unfavourable weight’ (3.9%). As with co-occurrence, class membership differed by sociodemographic factors: boys, children of mothers with lower educational attainment and children from lower income households were more likely to be in the ‘socioemotional burdened’ class. Children of mothers with higher educational attainment were more likely to be in the ‘normative’ and ‘eczema/unfavourable weight’ classes. Conclusions Co-occurrence of adverse health conditions at age 11 is common and is associated with adverse socioeconomic circumstances. Holistic, child focused care, particularly in boys and those in lower income groups, may help to prevent and reduce co-occurrence in later childhood and adolescence. PMID:27881529

  17. Influence of Kohn singularity on the occurrence scattering time in degenerate quantum collisional plasmas

    NASA Astrophysics Data System (ADS)

    Lee, Myoung-Jae; Jung, Young-Dae

    2017-10-01

    The influence of Kohn singularity on the occurrence scattering time for the electron-ion interaction is investigated in degenerate quantum collisional plasmas. The first-order eikonal analysis is used to obtain the scattering amplitude and the occurrence scattering time. The result shows that the Friedel oscillation due to the Kohn singularity suppresses the advance phenomena of occurrence scattering time in both forward and backward scattering domains. It is shown that the increase of plasmon energy would reduce the time advance for both forward and backward scattering domains. However, the increase of Fermi energy would enhance the phenomena of time advance. It is also found that the time advance with high collision frequency is larger than that with low collision frequency for the forward scattering domain and vice versa for the backward scattering domain. We have shown that the time advance is stronger in general for the forward scattering domain than that for the backward scattering domain.

  18. Incomes, Attitudes, and Occurrences of Invasive Species: An Application to Signal Crayfish in Sweden

    NASA Astrophysics Data System (ADS)

    Gren, Ing-Marie; Campos, Monica; Edsman, Lennart; Bohman, Patrik

    2009-02-01

    This article analyzes and carries out an econometric test of the explanatory power of economic and attitude variables for occurrences of the nonnative signal crayfish in Swedish waters. Signal crayfish are a carrier of plague which threatens the native noble crayfish with extinction. Crayfish are associated with recreational and cultural traditions in Sweden, which may run against environmental preferences for preserving native species. Econometric analysis is carried out using panel data at the municipality level with economic factors and attitudes as explanatory variables, which are derived from a simple dynamic harvesting model. A log-normal model is used for the regression analysis, and the results indicate significant impacts on occurrences of waters with signal crayfish of changes in both economic and attitude variables. Variables reflecting environmental and recreational preferences have unexpected signs, where the former variable has a positive and the latter a negative impact on occurrences of waters with signal crayfish. These effects are, however, counteracted by their respective interaction effect with income.

  19. Occurrence of amphibians in northern California coastal dune drainages

    USGS Publications Warehouse

    Halstead, Brian J.; Kleeman, Patrick M.

    2017-01-01

    Many coastal dune ecosystems have been degraded by non-native dune vegetation, but these systems might still provide valuable habitat for some taxa, including amphibians. Because restoration of degraded dune systems is occurring and likely to continue, we examined the occurrence of amphibians in drainages associated with a coastal dune ecosystem degraded by invasive plants (European Beachgrass, Ammophila arenaria, and Iceplant, Carpobrotus edulis). We found that occupancy of 3 amphibian species (California Red-legged Frog, Rana draytonii; Sierran Treefrog, Hyliola sierra; and Rough-skinned Newt, Taricha granulosa) among 21 coastal-dune drainages was high, with most coastal-dune drainages occupied by all 3 species. Furthermore, reproduction of Sierran Treefrogs and California Red-legged Frogs was estimated to occur in approximately ½ and ⅓ of the drainages, respectively. The probability of occurrence of Rough-skinned Newts and pre-metamorphic life stages of both anurans decreased during the study, perhaps because of ongoing drought in California or precipitation-induced changes in phenology during the final year of the study. Maintaining structural cover and moist features during dune restoration will likely benefit native amphibian populations inhabiting coastal-dune ecosystems.

  20. Plant-soil interactions promote co-occurrence of three nonnative woody shrubs.

    PubMed

    Kuebbing, Sara E; Classen, Aimée T; Call, Jaime J; Henning, Jeremiah A; Simberloff, Daniel

    2015-08-01

    Ecosystems containing multiple nonnative plant species are common, but mechanisms promoting their co-occurrence are understudied. Plant-soil interactions contribute to the dominance of singleton species in nonnative ranges because many nonnatives experience stronger positive feedbacks relative to co-occurring natives. Plant-soil interactions could impede other nonnatives if an individual nonnative benefits from its soil community to a greater extent than its neighboring nonnatives, as is seen with natives. However, plant-soil interactions could promote nonnative co-occurrence if a nonnative accumulates beneficial soil mutualists that also assist other nonnatives. Here, we use greenhouse and field experiments to ask whether plant-soil interactions (1) promote the codominance of two common nonnative shrubs (Ligustrum sinense and Lonicera maackii) and (2) facilitate the invasion of a less-common nonnative shrub (Rhamnus davurica) in deciduous forests of the southeastern United States. In the greenhouse, we found that two of the nonnatives, L. maackii and R. davurica, performed better in soils conditioned by nonnative shrubs compared to uninvaded forest soils, which. suggests that positive feedbacks among co-occurring nonnative shrubs can promote continued invasion of a site. In both greenhouse and field experiments, we found consistent signals that the codominance of the nonnatives L. sinense and L. maackii may be at least partially explained by the increased growth of L. sinense in L. maackii soils. Overall, significant effects of plant-soil interactions on shrub performance indicate that plant-soil interactions can potentially structure the co-occurrence patterns of these nonnatives.

  1. Bacterial networks and co-occurrence relationships in the lettuce root microbiota.

    PubMed

    Cardinale, Massimiliano; Grube, Martin; Erlacher, Armin; Quehenberger, Julian; Berg, Gabriele

    2015-01-01

    Lettuce is one of the most common raw foods worldwide, but occasionally also involved in pathogen outbreaks. To understand the correlative structure of the bacterial community as a network, we studied root microbiota of eight ancient and modern Lactuca sativa cultivars and the wild ancestor Lactuca serriola by pyrosequencing of 16S rRNA gene amplicon libraries. The lettuce microbiota was dominated by Proteobacteria and Bacteriodetes, as well as abundant Chloroflexi and Actinobacteria. Cultivar specificity comprised 12.5% of the species. Diversity indices were not different between lettuce cultivar groups but higher than in L. serriola, suggesting that domestication lead to bacterial diversification in lettuce root system. Spearman correlations between operational taxonomic units (OTUs) showed that co-occurrence prevailed over co-exclusion, and complementary fluorescence in situ hybridization-confocal laser scanning microscopy (FISH-CLSM) analyses revealed that this pattern results from both potential interactions and habitat sharing. Predominant taxa, such as Pseudomonas, Flavobacterium and Sphingomonadaceae rather suggested interactions, even though these are not necessarily part of significant modules in the co-occurrence networks. Without any need for complex interactions, single organisms are able to invade into this microbial network and to colonize lettuce plants, a fact that can influence the susceptibility to pathogens. The approach to combine co-occurrence analysis and FISH-CLSM allows reliably reconstructing and interpreting microbial interaction networks. © 2014 Society for Applied Microbiology and John Wiley & Sons Ltd.

  2. [Drivers of human-caused fire occurrence and its variation trend under climate change in the Great Xing'an Mountains, Northeast China].

    PubMed

    Li, Shun; Wu, Zhi Wei; Liang, Yu; He, Hong Shi

    2017-01-01

    The Great Xing'an Mountains are an important boreal forest region in China with high frequency of fire occurrences. With climate change, this region may have a substantial change in fire frequency. Building the relationship between spatial pattern of human-caused fire occurrence and its influencing factors, and predicting the spatial patterns of human-caused fires under climate change scenarios are important for fire management and carbon balance in boreal forests. We employed a spatial point pattern model to explore the relationship between the spatial pattern of human-caused fire occurrence and its influencing factors based on a database of historical fire records (1967-2006) in the Great Xing'an Mountains. The fire occurrence time was used as dependent variable. Nine abiotic (annual temperature and precipitation, elevation, aspect, and slope), biotic (vegetation type), and human factors (distance to the nearest road, road density, and distance to the nearest settlement) were selected as explanatory variables. We substituted the climate scenario data (RCP 2.6 and RCP 8.5) for the current climate data to predict the future spatial patterns of human-caused fire occurrence in 2050. Our results showed that the point pattern progress (PPP) model was an effective tool to predict the future relationship between fire occurrence and its spatial covariates. The climatic variables might significantly affect human-caused fire occurrence, while vegetation type, elevation and human variables were important predictors of human-caused fire occurrence. The human-caused fire occurrence probability was expected to increase in the south of the area, and the north and the area along the main roads would also become areas with high human-caused fire occurrence. The human-caused fire occurrence would increase by 72.2% under the RCP 2.6 scenario and by 166.7% under the RCP 8.5 scenario in 2050. Under climate change scenarios, the spatial patterns of human-caused fires were mainly

  3. Occurrence and persistence of future atmospheric stagnation events.

    PubMed

    Horton, Daniel E; Skinner, Christopher B; Singh, Deepti; Diffenbaugh, Noah S

    2014-08-01

    Poor air quality causes an estimated 2.6 to 4.4 million premature deaths per year 1-3 . Hazardous conditions form when meteorological components allow the accumulation of pollutants in the near-surface atmosphere 4-8 . Global warming-driven changes to atmospheric circulation and the hydrological cycle 9-13 are expected to alter the meteorological components that control pollutant build-up and dispersal 5-8,14 , but the magnitude, direction, geographic footprint, and public health impact of this alteration remain unclear 7,8 . We utilize an air stagnation index and an ensemble of bias-corrected climate model simulations to quantify the response of stagnation occurrence and persistence to global warming. Our analysis projects increases in stagnation occurrence that cover 55% of the current global population, with areas of increase affecting 10 times more people than areas of decrease. By the late-21 st century, robust increases of up to 40 days per year are projected throughout the majority of the tropics and subtropics, as well as within isolated mid-latitude regions. Potential impacts over India, Mexico, and the western U.S. are particularly acute due to the intersection of large populations and increases in the persistence of stagnation events, including those of extreme duration. These results indicate that anthropogenic climate change is likely to alter the level of pollutant management required to meet future air quality targets.

  4. Co-occurrence of anaerobic bacteria in colorectal carcinomas.

    PubMed

    Warren, René L; Freeman, Douglas J; Pleasance, Stephen; Watson, Peter; Moore, Richard A; Cochrane, Kyla; Allen-Vercoe, Emma; Holt, Robert A

    2013-05-15

    Numerous cancers have been linked to microorganisms. Given that colorectal cancer is a leading cause of cancer deaths and the colon is continuously exposed to a high diversity of microbes, the relationship between gut mucosal microbiome and colorectal cancer needs to be explored. Metagenomic studies have shown an association between Fusobacterium species and colorectal carcinoma. Here, we have extended these studies with deeper sequencing of a much larger number (n = 130) of colorectal carcinoma and matched normal control tissues. We analyzed these data using co-occurrence networks in order to identify microbe-microbe and host-microbe associations specific to tumors. We confirmed tumor over-representation of Fusobacterium species and observed significant co-occurrence within individual tumors of Fusobacterium, Leptotrichia and Campylobacter species. This polymicrobial signature was associated with over-expression of numerous host genes, including the gene encoding the pro-inflammatory chemokine Interleukin-8. The tumor-associated bacteria we have identified are all Gram-negative anaerobes, recognized previously as constituents of the oral microbiome, which are capable of causing infection. We isolated a novel strain of Campylobacter showae from a colorectal tumor specimen. This strain is substantially diverged from a previously sequenced oral Campylobacter showae isolate, carries potential virulence genes, and aggregates with a previously isolated tumor strain of Fusobacterium nucleatum. A polymicrobial signature of Gram-negative anaerobic bacteria is associated with colorectal carcinoma tissue.

  5. Memory for Frequency of Occurrence in Retarded and Nonretarded Persons.

    ERIC Educational Resources Information Center

    Ellis, Norman R.; Allison, Pamela

    1988-01-01

    Ninety-six mildly mentally retarded persons and 96 nonretarded college students estimated the frequency of occurrence of words and pictures in a study test paradigm. Frequency estimates were equal for words, but the nonretarded subjects were superior in accuracy on pictorial items. This finding points to an encoding deficiency attributed to…

  6. TelCoVis: Visual Exploration of Co-occurrence in Urban Human Mobility Based on Telco Data.

    PubMed

    Wu, Wenchao; Xu, Jiayi; Zeng, Haipeng; Zheng, Yixian; Qu, Huamin; Ni, Bing; Yuan, Mingxuan; Ni, Lionel M

    2016-01-01

    Understanding co-occurrence in urban human mobility (i.e. people from two regions visit an urban place during the same time span) is of great value in a variety of applications, such as urban planning, business intelligence, social behavior analysis, as well as containing contagious diseases. In recent years, the widespread use of mobile phones brings an unprecedented opportunity to capture large-scale and fine-grained data to study co-occurrence in human mobility. However, due to the lack of systematic and efficient methods, it is challenging for analysts to carry out in-depth analyses and extract valuable information. In this paper, we present TelCoVis, an interactive visual analytics system, which helps analysts leverage their domain knowledge to gain insight into the co-occurrence in urban human mobility based on telco data. Our system integrates visualization techniques with new designs and combines them in a novel way to enhance analysts' perception for a comprehensive exploration. In addition, we propose to study the correlations in co-occurrence (i.e. people from multiple regions visit different places during the same time span) by means of biclustering techniques that allow analysts to better explore coordinated relationships among different regions and identify interesting patterns. The case studies based on a real-world dataset and interviews with domain experts have demonstrated the effectiveness of our system in gaining insights into co-occurrence and facilitating various analytical tasks.

  7. Comparison of drought occurrence in selected Slovak and Czech catchments

    NASA Astrophysics Data System (ADS)

    Fendekova, Miriam; Fendek, Marian; Porubska, Diana; Hanel, Martin; Horacek, Stanislav; Martinkova, Marta; Vizina, Adam

    2014-05-01

    The presented study is focused on the analysis and comparison of hydrological drought occurrence, development and duration in six small to middle sized catchments in the Czech Republic (CZ) and Slovakia. The main questions to be answered are: (1) are there correlations between the physical conditions in the catchments and drought occurrence, and (2) does the spatial trend of drought occurrence exist. The Žitava catchment is located in the central western part of Slovakia having runoff dominated by rainfall with the contribution of snow melting during the spring period. The Belá River catchment is located on the contact of Západné and Vysoké Tatry Mts. in the north of Slovakia. The runoff is snow to snow-rain combined type. The Ľupčianka catchment is located on the northern slopes of the Nízke Tatry Mts. in the northern part of the central Slovakia. The runoff regime is snow-rain combined in the upper part of the catchment, and of rain-snow type in the rest of catchment. The Rakovnický potok brook (CZ) has its spring in Rakovnická pahorkatina hilly land. Runoff is dominated by rainfall, quite heavily influenced by water uptakes in the catchment. The Teplá River (CZ) originates in peat meadows in the western part of the Czech Republic. Runoff is dominated by rainfall. The Metuje catchment (CZ) is formed by Adršsbach-Teplické stěny Upland. The headwater part is typical by deeply incest valleys, table mountains and pseudokarst caves. The discharge is fed dominantly by groundwater. The streamflow drought was characterized using discharge data, the groundwater drought using the base flow values. The local minimum method was used for base flow separation. The threshold level method (Q80, BF80) and the sequent peak algorithm were used for calculation of drought duration in discharge and base flow time series. The data of the same three decades of the common period (1971 - 1980, 1981 - 1990 and 1991 - 2000) were used. The resulting base flow values along with

  8. Relationship between occurrence of surgical complications and hospital finances.

    PubMed

    Eappen, Sunil; Lane, Bennett H; Rosenberg, Barry; Lipsitz, Stuart A; Sadoff, David; Matheson, Dave; Berry, William R; Lester, Mark; Gawande, Atul A

    2013-04-17

    The effect of surgical complications on hospital finances is unclear. To determine the relationship between major surgical complications and per-encounter hospital costs and revenues by payer type. Retrospective analysis of administrative data for all inpatient surgical discharges during 2010 from a nonprofit 12-hospital system in the southern United States. Discharges were categorized by principal procedure and occurrence of 1 or more postsurgical complications, using International Classification of Diseases, Ninth Revision, diagnosis and procedure codes. Nine common surgical procedures and 10 major complications across 4 payer types were analyzed. Hospital costs and revenue at discharge were obtained from hospital accounting systems and classified by payer type. Hospital costs, revenues, and contribution margin (defined as revenue minus variable expenses) were compared for patients with and without surgical complications according to payer type. Of 34,256 surgical discharges, 1820 patients (5.3%; 95% CI, 4.4%-6.4%) experienced 1 or more postsurgical complications. Compared with absence of complications, complications were associated with a $39,017 (95% CI, $20,069-$50,394; P < .001) higher contribution margin per patient with private insurance ($55,953 vs $16,936) and a $1749 (95% CI, $976-$3287; P < .001) higher contribution margin per patient with Medicare ($3629 vs $1880). For this hospital system in which private insurers covered 40% of patients (13,544), Medicare covered 45% (15,406), Medicaid covered 4% (1336), and self-payment covered 6% (2202), occurrence of complications was associated with an $8084 (95% CI, $4903-$9740; P < .001) higher contribution margin per patient ($15,726 vs $7642) and with a $7435 lower per-patient total margin (95% CI, $5103-$10,507; P < .001) ($1013 vs -$6422). In this hospital system, the occurrence of postsurgical complications was associated with a higher per-encounter hospital contribution margin for patients covered by

  9. Impact of raised without antibiotics practices on occurrences of antimicrobial resistance

    USDA-ARS?s Scientific Manuscript database

    Background: The increasing occurrence of antimicrobial-resistant human infections has been attributed to the use of antimicrobials in a variety of applications including food-animal production. "Raised without antibiotics" (RWA) meat production has been offered as a practice to reduce antimicrobial-...

  10. The fossil record and taphonomy of butterflies and moths (Insecta, Lepidoptera): implications for evolutionary diversity and divergence-time estimates.

    PubMed

    Sohn, Jae-Cheon; Labandeira, Conrad C; Davis, Donald R

    2015-02-04

    It is conventionally accepted that the lepidopteran fossil record is significantly incomplete when compared to the fossil records of other, very diverse, extant insect orders. Such an assumption, however, has been based on cumulative diversity data rather than using alternative statistical approaches from actual specimen counts. We reviewed documented specimens of the lepidopteran fossil record, currently consisting of 4,593 known specimens that are comprised of 4,262 body fossils and 331 trace fossils. The temporal distribution of the lepidopteran fossil record shows significant bias towards the late Paleocene to middle Eocene time interval. Lepidopteran fossils also record major shifts in preservational style and number of represented localities at the Mesozoic stage and Cenozoic epoch level of temporal resolution. Only 985 of the total known fossil specimens (21.4%) were assigned to 23 of the 40 extant lepidopteran superfamilies. Absolute numbers and proportions of preservation types for identified fossils varied significantly across superfamilies. The secular increase of lepidopteran family-level diversity through geologic time significantly deviates from the general pattern of other hyperdiverse, ordinal-level lineages. Our statistical analyses of the lepidopteran fossil record show extreme biases in preservation type, age, and taxonomic composition. We highlight the scarcity of identified lepidopteran fossils and provide a correspondence between the latest lepidopteran divergence-time estimates and relevant fossil occurrences at the superfamily level. These findings provide caution in interpreting the lepidopteran fossil record through the modeling of evolutionary diversification and in determination of divergence time estimates.

  11. Myxomatosis: the occurrence of antibody to a soluble antigen of myxoma virus in wild rabbits, Oryctolagus cuniculus (L.), in Victoria, Australia.

    PubMed Central

    Edmonds, J. W.; Shepherd, R. C.; Nolan, I. F.

    1978-01-01

    The occurrence of antibody of myxoma virus in wild rabbits following epizootics is highest in the semi-arid north-west of Victoria and lowest in temperate southern Victoria. Occurrence ranges up to about 90% in the north-west and to about 70% in the south except on the Western Plains where epizootics are rare and antibody occurrence seldom exceeds 30%. The establishment of the European rabbit flea may be changing the pattern of occurrence of antibody in the north-west by causing spring outbreaks of myxomatosis. It is suggested that the effects of the replacement of a simple recurring system of epizootic and breeding season several months apart by the occurrence of myxomatosis twice in the same year, once coincident with the breeding season, will be complex. The occurrence of detectable antibody may be less dependent on the infection rate and may be dependent to some extent on the relative timing of spring myxomatosis and the breeding season. PMID:701788

  12. Myxomatosis: the occurrence of antibody to a soluble antigen of myxoma virus in wild rabbits, Oryctolagus cuniculus (L.), in Victoria, Australia.

    PubMed

    Edmonds, J W; Shepherd, R C; Nolan, I F

    1978-10-01

    The occurrence of antibody of myxoma virus in wild rabbits following epizootics is highest in the semi-arid north-west of Victoria and lowest in temperate southern Victoria. Occurrence ranges up to about 90% in the north-west and to about 70% in the south except on the Western Plains where epizootics are rare and antibody occurrence seldom exceeds 30%. The establishment of the European rabbit flea may be changing the pattern of occurrence of antibody in the north-west by causing spring outbreaks of myxomatosis. It is suggested that the effects of the replacement of a simple recurring system of epizootic and breeding season several months apart by the occurrence of myxomatosis twice in the same year, once coincident with the breeding season, will be complex. The occurrence of detectable antibody may be less dependent on the infection rate and may be dependent to some extent on the relative timing of spring myxomatosis and the breeding season.

  13. 2004 National Atrazine Occurrence Monitoring Program using the Abraxis ELISA method.

    PubMed

    Graziano, Nicole; McGuire, Michael J; Roberson, Alan; Adams, Craig; Jiang, Hua; Blute, Nicole

    2006-02-15

    The goal of this project was to gain a better understanding of atrazine occurrence in the United States by surveying drinking water utilities' sources and finished water for atrazine on a weekly basis for seven months. Atrazine is a contaminant of interest because the United States Environmental Protection Agency (USEPA) has found short-term atrazine exposure above the drinking water maximum contaminant level (MCL) to potentially cause heart, lung, and kidney congestion, low blood pressure, muscle spasms, weight loss, and damage to the adrenal glands. Long-term exposure to atrazine concentrations above the drinking water MCL has been linked to weight loss, cardiovascular damage, retinal and muscle degeneration, and cancer. This survey effort improved upon previously conducted atrazine surveys through intensive, high frequency sampling (participating plants sampled their raw and finished water on a weekly basis for approximately seven months). Such an intensive effort allowed the authors to gain a better understanding of short-term atrazine occurrence and its variability in drinking water sources. This information can benefit the drinking water industry by facilitating (1) better atrazine occurrence management (i.e., awareness when plants may be more susceptible to atrazine), (2) more efficient atrazine control (e.g., effective treatment alternatives and more effective response to atrazine occurrence), and (3) treatment cost reduction (e.g., efficient atrazine control can result in substantial cost savings). Forty-seven drinking watertreatment plants located primarily in the Midwestern United States participated in the survey and sampled their raw and finished water on a weekly basis from March through October. Samples were analyzed using the Abraxis enzyme-linked immunosorbent assay (ELISA) test kit. Confirmation samples for quality assurance/quality control (QA/QC) purposes were analyzed using solid-phase extraction (SPE) followed by gas chromatography mass

  14. Observed correlation between the depth to base and top of gas hydrate occurrence from review of global drilling data

    NASA Astrophysics Data System (ADS)

    Riedel, M.; Collett, T. S.

    2017-07-01

    A global inventory of data from gas hydrate drilling expeditions is used to develop relationships between the base of structure I gas hydrate stability, top of gas hydrate occurrence, sulfate-methane transition depth, pressure (water depth), and geothermal gradients. The motivation of this study is to provide first-order estimates of the top of gas hydrate occurrence and associated thickness of the gas hydrate occurrence zone for climate-change scenarios, global carbon budget analyses, or gas hydrate resource assessments. Results from publically available drilling campaigns (21 expeditions and 52 drill sites) off Cascadia, Blake Ridge, India, Korea, South China Sea, Japan, Chile, Peru, Costa Rica, Gulf of Mexico, and Borneo reveal a first-order linear relationship between the depth to the top and base of gas hydrate occurrence. The reason for these nearly linear relationships is believed to be the strong pressure and temperature dependence of methane solubility in the absence of large difference in thermal gradients between the various sites assessed. In addition, a statistically robust relationship was defined between the thickness of the gas hydrate occurrence zone and the base of gas hydrate stability (in meters below seafloor). The relationship developed is able to predict the depth of the top of gas hydrate occurrence zone using observed depths of the base of gas hydrate stability within less than 50 m at most locations examined in this study. No clear correlation of the depth to the top and base of gas hydrate occurrences with geothermal gradient and sulfate-methane transition depth was identified.

  15. Observed correlation between the depth to base and top of gas hydrate occurrence from review of global drilling data

    USGS Publications Warehouse

    Riedel, Michael; Collett, Timothy S.

    2017-01-01

    A global inventory of data from gas hydrate drilling expeditions is used to develop relationships between the base of structure I gas hydrate stability, top of gas hydrate occurrence, sulfate-methane transition depth, pressure (water depth), and geothermal gradients. The motivation of this study is to provide first-order estimates of the top of gas hydrate occurrence and associated thickness of the gas hydrate occurrence zone for climate-change scenarios, global carbon budget analyses, or gas hydrate resource assessments. Results from publically available drilling campaigns (21 expeditions and 52 drill sites) off Cascadia, Blake Ridge, India, Korea, South China Sea, Japan, Chile, Peru, Costa Rica, Gulf of Mexico, and Borneo reveal a first-order linear relationship between the depth to the top and base of gas hydrate occurrence. The reason for these nearly linear relationships is believed to be the strong pressure and temperature dependence of methane solubility in the absence of large difference in thermal gradients between the various sites assessed. In addition, a statistically robust relationship was defined between the thickness of the gas hydrate occurrence zone and the base of gas hydrate stability (in meters below seafloor). The relationship developed is able to predict the depth of the top of gas hydrate occurrence zone using observed depths of the base of gas hydrate stability within less than 50 m at most locations examined in this study. No clear correlation of the depth to the top and base of gas hydrate occurrences with geothermal gradient and sulfate-methane transition depth was identified.

  16. The occurrence of overload at work and musculoskeletal pain in young physiotherapists.

    PubMed

    Truszczyńska, Aleksandra; Scherer, Anna; Drzał-Grabiec, Justyna

    2016-06-23

    A job requiring stooping, lifting, carrying loads and multiple repetitions of the same movement patterns leads to overloading the musculoskeletal system. The aim of the study was to assess the work-related load experienced by physiotherapists and the occurrence of the musculoskeletal system overload. The study included 108 young physiotherapists, 69 women and 39 men, aged from 25 to 35 years (mean 27.12 ± 3.72 years). The study used an anonymous questionnaire and Quick Exposure Check. The most common musculoskeletal complaints were as follows: 70 physiotherapists (64.8%) reported low back pain, 60 (55.6%) cervical pain, and 34 (31.5%) pain in the wrists and fingers. Statistically significant positive correlations were revealed between the number of years worked in the profession and shoulder pain. The number of hours of work per week was positively correlated with the occurrence of pain in all analyzed body areas. Professional experience was negatively correlated with the level of stress felt. Physiotherapists dealing with manual therapy and exercise physiotherapy were particularly vulnerable to musculoskeletal overload. Popularization of knowledge regarding ergonomics among physiotherapists could reduce the occurrence of musculoskeletal overload.

  17. Intra-uterine microbial colonization and occurrence of endometritis in women with endometriosis†.

    PubMed

    Khan, Khaleque Newaz; Fujishita, Akira; Kitajima, Michio; Hiraki, Koichi; Nakashima, Masahiro; Masuzaki, Hideaki

    2014-11-01

    Is there any risk of intra-uterine bacterial colonization and concurrent occurrence of endometritis in women with endometriosis? An increase in intra-uterine microbial colonization and concurrent endometritis occurred in women with endometriosis that was further increased after GnRH agonist (GnRHa) treatment. Higher bacterial contamination of menstrual blood and increased endotoxin level in menstrual and peritoneal fluids have been found in women with endometriosis than in control women. However, information on intra-uterine microbial colonization across the phases of the menstrual cycle and possible occurrence of endometritis in women with endometriosis is still lacking. This is a case-controlled study with prospective collection of vaginal smears/endometrial samples from women with and without endometriosis and retrospective evaluation. Vaginal smears and endometrial smears were collected from 73 women with endometriosis and 55 control women. Twenty of the women with endometriosis and 19 controls had received GnRHa therapy for a period of 4-6 months. Vaginal pH was measured by intra-vaginal insertion of a pH paper strip. The bacterial vaginosis (BV) score was analyzed by Gram-staining of vaginal smears and based on a modified Nugent-BV scoring system. A panel of bacteria was analyzed by culture of endometrial samples from women treated with GnRHa or not treated. Immunohistochemcial analysis was performed using antibody against Syndecan-1 (CD138) and myeloperoxidase in endometrial biopsy specimens from women with and without endometriosis. A significant shifting of intra-vaginal pH to ≥4.5 was observed in women with endometriosis compared with control women (79.3 versus 58.4%, P < 0.03). Compared with untreated women, use of GnRHa therapy also shifted vaginal pH to ≥4.5 in both control women (P = 0.004) and in women with endometriosis (P = 0.03). A higher risk of increasing intermediate flora (total score, 4-6) (P = 0.05) was observed in women with

  18. Temporal Patterns of Larval Fish Occurrence in a Large Subtropical River

    PubMed Central

    Shuai, Fangmin; Li, Xinhui; Li, Yuefei; Li, Jie; Yang, Jiping; Lek, Sovan

    2016-01-01

    Knowledge of temporal patterns of larval fish occurrence is limited in south China, despite its ecological importance. This research examines the annual and seasonal patterns of fish larval presence in the large subtropical Pearl River. Data is based on samples collected every two days, from 2006 to 2013. In total, 45 taxa representing 13 families and eight orders were sampled. The dominant larval family was Cyprinidae, accounting for 27 taxa. Squaliobarbus curriculus was the most abundant species, followed by Megalobrama terminalis, Xenocypris davidi, Cirrhinus molitorella, Hemiculter leuscisculus and Squalidus argentatus. Fish larvae abundances varied significantly throughout the seasons (multivariate analyses: Cluster, SIMPROF and ANOSIM). The greatest numbers occurred between May and September, peaking from June through August, which corresponds to the reproductive season. In this study, redundancy analysis was used to describe the relationship between fish larval abundance and associated environmental factors. Mean water temperature, river discharge, atmospheric pressure, maximum temperature and precipitation play important roles in larval occurrence patterns. According to seasonal variations, fish larvae occurrence is mainly affected by water temperature. It was also noted that the occurrence of Salanx reevesii and Cyprinus carpio larvae is associated with higher dissolved oxygen (DO) concentrations, higher atmospheric pressure and lower water temperatures which occur in the spring. On the other hand, M. terminalis, X. davidi, and C. molitorella are associated with high precipitation, high river discharge, low atmospheric pressure and low DO concentrations which featured during the summer months. S. curriculus also peaks in the summer and is associated with peak water temperatures and minimum NH3–N concentrations. Rhinogobius giurinus occur when higher atmospheric pressure, lower precipitation and lower river discharges occur in the autumn. Dominant fish

  19. Study of Local Radon Occurrence as an Interdisciplinary Undergraduate Research Project.

    ERIC Educational Resources Information Center

    Purdom, William Berlin; And Others

    1990-01-01

    Described is an undergraduate interdisciplinary project encompassing physics, computer science, and geology and involving a number of students from several academic departments. The project used the topic of the occurrence of in-home radon. Student projects, radon sampling, and results are discussed. (CW)

  20. OCCURRENCE AND TOXICITY OF IODINATED DISINFECTION BY-PRODUCTS IN DRINKING WATER

    EPA Science Inventory

    As part of a recent Nationwide Disinfection By-Product (DBP) Occurrence Study, iodo-acids were identified for the first time as DBPs in drinking water disinfected with chloramines. The iodo-acids identified included iodoacetic acid, bromoiodoacetic acid, (E)-3-bromo-3-iodo-prope...

  1. Occurrence of transformation products in the environment

    USGS Publications Warehouse

    Kolpin, Dana W.; Battaglin, William A.; Conn, Kathleen E.; Furlong, Edward T.; Glassmeyer, Susan T.; Kalkhoff, Stephen J.; Meyer, Michael T.; Schnoebelen, Douglas J.; Boxall, Alistair B.A.

    2009-01-01

    Historically, most environmental occurrence research has focused on the parent compounds of organic contaminants. Research, however, has documented that the environmental transport of chemicals, such as pesticides and emerging contaminants, are substantially underestimated if transformation products are not considered. Although most examples described herein were drawn from research conducted by the U.S. Geological Survey, such results are generally reflective of those found in other parts of the world. Results from a study of 51 streams in the Midwestern United States found that transformation products were seven of the ten most frequently detected pesticide compounds in late spring runoff (after application of pre-emergent herbicides), and nine of the ten most frequently detected compounds in fall season runoff (during and after harvest). In fact, 70% of the total herbicide concentration in water from the Mississippi River Basin was from transformation products. Results from a study of 86 municipal wells in Iowa found the frequency of detection increased from 17%, when pesticide parent compounds were considered, to 53%, when both parents and transformation products were considered. Transformation products were 12 of the 15 most frequently detected compounds for this groundwater study. Although studies on transformation products of synthetic organic compounds other than pesticides are not as common, wastewater treatment plant discharges have repeatedly been shown to contribute such transformation products to streams. In addition, select detergent transformation products have been commonly found in solid waste in the 1000's mg/kg. These findings and many others document that transformation products must be considered to fully assess the potential environmental occurrence of chemical contaminants and their transport and fate in various compartments of the hydrologic system. ?? 2008 Springer-Verlag Berlin Heidelberg.

  2. Phyllostomid Bat Occurrence in Successional Stages of Neotropical Dry Forests

    PubMed Central

    Avila-Cabadilla, Luis Daniel; Stoner, Kathryn Elizabeth; Nassar, Jafet M.; Espírito-Santo, Mario M.; Alvarez-Añorve, Mariana Yolotl; Aranguren, Carla I.; Henry, Mickael; González-Carcacía, José A.; Dolabela Falcão, Luiz A.; Sanchez-Azofeifa, Gerardo Arturo

    2014-01-01

    Tropical dry forests (TDFs) are highly endangered tropical ecosystems being replaced by a complex mosaic of patches of different successional stages, agricultural fields and pasturelands. In this context, it is urgent to understand how taxa playing critical ecosystem roles respond to habitat modification. Because Phyllostomid bats provide important ecosystem services (e.g. facilitate gene flow among plant populations and promote forest regeneration), in this study we aimed to identify potential patterns on their response to TDF transformation in sites representing four different successional stages (initial, early, intermediate and late) in three Neotropical regions: México, Venezuela and Brazil. We evaluated bat occurrence at the species, ensemble (abundance) and assemblage level (species richness and composition, guild composition). We also evaluated how bat occurrence was modulated by the marked seasonality of TDFs. In general, we found high seasonal and regional specificities in phyllostomid occurrence, driven by specificities at species and guild levels. For example, highest frugivore abundance occurred in the early stage of the moistest TDF, while highest nectarivore abundance occurred in the same stage of the driest TDF. The high regional specificity of phyllostomid responses could arise from: (1) the distinctive environmental conditions of each region, (2) the specific behavior and ecological requirements of the regional bat species, (3) the composition, structure and phenological patterns of plant assemblages in the different stages, and (4) the regional landscape composition and configuration. We conclude that, in tropical seasonal environments, it is imperative to perform long-term studies considering seasonal variations in environmental conditions and plant phenology, as well as the role of landscape attributes. This approach will allow us to identify potential patterns in bat responses to habitat modification, which constitute an invaluable tool for

  3. Predicting occurrence of juvenile shark habitat to improve conservation planning.

    PubMed

    Oh, Beverly Z L; Sequeira, Ana M M; Meekan, Mark G; Ruppert, Jonathan L W; Meeuwig, Jessica J

    2017-06-01

    Fishing and habitat degradation have increased the extinction risk of sharks, and conservation strategies recognize that survival of juveniles is critical for the effective management of shark populations. Despite the rapid expansion of marine protected areas (MPAs) globally, the paucity of shark-monitoring data on large scales (100s-1000s km) means that the effectiveness of MPAs in halting shark declines remains unclear. Using data collected by baited remote underwater video systems (BRUVS) in northwestern Australia, we developed generalized linear models to elucidate the ecological drivers of habitat suitability for juvenile sharks. We assessed occurrence patterns at the order and species levels. We included all juvenile sharks sampled and the 3 most abundant species sampled separately (grey reef [Carcharhinus amblyrhynchos], sandbar [Carcharhinus plumbeus], and whitetip reef sharks [Triaenodon obesus]). We predicted the occurrence of juvenile sharks across 490,515 km 2 of coastal waters and quantified the representation of highly suitable habitats within MPAs. Our species-level models had higher accuracy (ĸ ≥ 0.69) and deviance explained (≥48%) than our order-level model (ĸ = 0.36 and deviance explained of 10%). Maps of predicted occurrence revealed different species-specific patterns of highly suitable habitat. These differences likely reflect different physiological or resource requirements between individual species and validate concerns over the utility of conservation targets based on aggregate species groups as opposed to a species-focused approach. Highly suitable habitats were poorly represented in MPAs with the most restrictions on extractive activities. This spatial mismatch possibly indicates a lack of explicit conservation targets and information on species distribution during the planning process. Non-extractive BRUVS provided a useful platform for building the suitability models across large scales to assist conservation planning across

  4. Assessing future changes in the occurrence of rainfall-induced landslides at a regional scale.

    PubMed

    Gariano, S L; Rianna, G; Petrucci, O; Guzzetti, F

    2017-10-15

    According to the fifth report of the Intergovernmental Panel on Climate Change, an increase in the frequency and the intensity of extreme rainfall is expected in the Mediterranean area. Among different impacts, this increase might result in a variation in the frequency and the spatial distribution of rainfall-induced landslides, and in an increase in the size of the population exposed to landslide risk. We propose a method for the regional-scale evaluation of future variations in the occurrence of rainfall-induced landslides, in response to changes in rainfall regimes. We exploit information on the occurrence of 603 rainfall-induced landslides in Calabria, southern Italy, in the period 1981-2010, and daily rainfall data recorded in the same period in the region. Furthermore, we use high-resolution climate projections based on RCP4.5 and RCP8.5 scenarios. In particular, we consider the mean variations between a 30-year future period (2036-2065) and the reference period 1981-2010 in three variables assumed as proxy for landslide activity: annual rainfall, seasonal cumulated rainfall, and annual maxima of daily rainfall. Based on reliable correlations between landslide occurrence and weather variables estimated in the reference period, we assess future variations in rainfall-induced landslide occurrence for all the municipalities of Calabria. A +45.7% and +21.2% average regional variation in rainfall-induced landslide occurrence is expected in the region for the period 2036-2065, under the RCP4.5 and RCP8.5 scenario, respectively. We also investigate the future variations in the impact of rainfall-induced landslides on the population of Calabria. We find a +80.2% and +54.5% increase in the impact on the population for the period 2036-2065, under the RCP4.5 and RCP8.5 scenario, respectively. The proposed method is quantitative and reproducible, thus it can be applied in similar regions, where adequate landslide and rainfall information is available. Copyright © 2017

  5. Variation in orgasm occurrence by sexual orientation in a sample of U.S. singles.

    PubMed

    Garcia, Justin R; Lloyd, Elisabeth A; Wallen, Kim; Fisher, Helen E

    2014-11-01

    Despite recent advances in understanding orgasm variation, little is known about ways in which sexual orientation is associated with men's and women's orgasm occurrence. To assess orgasm occurrence during sexual activity across sexual orientation categories. Data were collected by Internet questionnaire from 6,151 men and women (ages 21-65+ years) as part of a nationally representative sample of single individuals in the United States. Analyses were restricted to a subsample of 2,850 singles (1,497 men, 1,353 women) who had experienced sexual activity in the past 12 months. Participants reported their sex/gender, self-identified sexual orientation (heterosexual, gay/lesbian, bisexual), and what percentage of the time they experience orgasm when having sex with a familiar partner. Mean occurrence rate for experiencing orgasm during sexual activity with a familiar partner was 62.9% among single women and 85.1% among single men, which was significantly different (F1,2848  = 370.6, P < 0.001, η(2)  = 0.12). For men, mean occurrence rate of orgasm did not vary by sexual orientation: heterosexual men 85.5%, gay men 84.7%, bisexual men 77.6% (F2,1494  = 2.67, P = 0.07, η(2)  = 0.004). For women, however, mean occurrence rate of orgasm varied significantly by sexual orientation: heterosexual women 61.6%, lesbian women 74.7%, bisexual women 58.0% (F2,1350  = 10.95, P < 0.001, η(2)  = 0.02). Lesbian women had a significantly higher probability of orgasm than did either heterosexual or bisexual women (P < 0.05). Findings from this large dataset of U.S. singles suggest that women, regardless of sexual orientation, have less predictable, more varied orgasm experiences than do men and that for women, but not men, the likelihood of orgasm varies with sexual orientation. These findings demonstrate the need for further investigations into the comparative sexual experiences and sexual health outcomes of sexual minorities. © 2014

  6. Occurrence, sources, and fate of pharmaceuticals in aquatic environment and soil.

    PubMed

    Li, W C

    2014-04-01

    With the rapid economic development, a better living condition leads to longer life expectancy, which increased the total population, in particular the elderly group. It may result in increase in the demand of pharmaceuticals for people in domestic use or in hospital. Although most sewage treatment plants or waste water treatment plantsmet the regulatory requirement, there are still many pharmaceuticals removed incompletely and thus discharged to the environment. Therefore, the pharmaceuticals residue draws the public concern because they might cause adverse effects on the organism even human beings. Recently, many studies have published on the source and occurrence as well as the fate of pharmaceuticals all over the world. This paper summarized and reviewed the recent studies on the sources, occurrence, fate and the effects of the most common pharmaceuticals. Finally, it gave the suggestion and risk management for controlling the pharmaceuticals. Copyright © 2014 Elsevier Ltd. All rights reserved.

  7. The paleogeographic significance of Aquilapollenites occurrence in Pakistan

    NASA Astrophysics Data System (ADS)

    Khan, Asrar M.; Srivastava, Satish K.

    2006-12-01

    The occurrence of the genus Aquilapollenites in Upper Cretaceous and Neogene sediments of northwestern Pakistan is reported here. Aquilapollenites amplus, Aquilapollenites reductus, and Aquilapollenites sp. occur in the Maastrichtian palynomorph assemblage from an outcrop sample of the Mir Ali section, northern Waziristan. Aquilapollenites medeis in the Neogene Murgha Faqir Zai Formation of the Pishin Basin, Balochistan, is considered a reworked Cretaceous specimen. The Upper Cretaceous sediments of the Asian plate on the Tethys margin are considered to be the source of Aquilapollenites spp. in these samples.

  8. Climate-driven trends in the occurrence of major floods across North America and Europe

    NASA Astrophysics Data System (ADS)

    Hodgkins, Glenn A.; Whitfield, Paul H.; Burn, Donald H.; Hannaford, Jamie; Renard, Benjamin; Stahl, Kerstin; Fleig, Anne K.; Madsen, Henrik; Mediero, Luis; Korhonen, Johanna; Murphy, Conor; Crochet, Philippe; Wilson, Donna

    2016-04-01

    long-term variability in the number of major floods, annual exceedances of 25-, 50-, and 100-year floods during the last 50 - 80 years are estimated for all study gauges across North America and Europe, and for smaller groups of gauges defined by catchment size, location, climate, flood threshold, and period of record. Trends are computed using logistic regression techniques, supported by a suite of methods used to test the assumptions used in the analysis. We also analyse relationships between major flood occurrence and atmosphere/ocean indices (the AMO, NAO, PDO and SOI). Our analysis finds no compelling evidence for consistent changes over time in major-flood occurrence across North America and Europe, indicating that generalizations about major-flood occurrence trends across large domains or a diversity of catchment types are ungrounded. There are in fact more significant relationships between major-flood occurrence and the AMO than between flood occurrence and time. Flood occurrence overall (based on data from all 1204 gauges in our study) increased from 1961 to 2010 but not significantly, driven primarily by European increases. Non-significant increases were also found overall from 1931 to 2010 (322 gauges) but driven primarily by North American increases. Flood occurrence increased and decreased (including some significant changes) for the various sub-groups of gauges. Overall this study demonstrates that past changes in major-flood occurrence are highly complex and future changes will be likewise. International hydrologic networks containing minimally altered catchments will play a key role in understanding these complexities.

  9. [Co-occurrence of soil fauna communities with changes in altitude on the northern slope of Changbai Mountain].

    PubMed

    Tong, Fuchun; Jin, Zhedong; Wang, Qingli; Xiao, Yihua

    2003-10-01

    The co-occurrence of soil fauna communities at different altitudes may reflect at some extent the relationships among communities, their coexistence, and the replacement of species along the altitude gradient. The continuous or disjunctive distribution of different species along altitude gradient not only reflected the environment variation at altitude gradient, but also the biological and ecological spatiality as well as the adaptability of species. The northern slope of Changbai Moutain has not only a high diversity in soil fauna types and species, but also a high variation of diversity pattern along the altitude gradient, which is a perfect transect for the research of biodiversity and gradient patterns. From 550 m to 2,560 m on the northern slope of Changbai Mountain, twenty-two plots were investigated with an interval of 100 m in altitude. By using Jaccard index, the co-occurrence of soil fauna communities at different altitudes was analyzed. For the species of different life forms or for all the species as a whole, the co-occurrence of soil faunae between neighboring communities was the highest, except for that between different soil fauna types. The peak and valley values of the co-occurrence of soil fauna communities along altitude gradient were matched with their gradient patterns, and the co-occurrence of soil faunae at different layers or all of the soil fauna communities were decreased with increasing altitude difference.

  10. Occurrence of Bluetongue in ruminants in Tamil Nadu, South India.

    PubMed

    Reddy, Y Krishnamohan; Brindha, K; Ganesan, P I; Srinivas, K; Reddy, G S; Minakshi, P

    2016-09-30

    Tamil Nadu is located in the South-Eastern part of Indian peninsula, between 8.087° and 13.09°N and 76.50° and 80.27°E. Bluetongue (BT) was first reported in this region in sheep during 1982 with regular occurrence thereafter. In 1989-1990, 1997-1998 and 2005-2006, there was wide spread occurrence of BT resulting in huge mortality of sheep. The present study had the goal of isolating the BTV from outbreaks in sheep occurred in Tamil Naadu between 2003-2011 and comparing the VP2 gene sequences of the BTV isolates involved in such outbreaks. Serotypes 1, 2, 16, and 23 of the Bluetongue virus (BTV) have been isolated from sheep during BT outbreaks. BTV-16 has also been isolated in goats and cattle in the region; BTV-2 isolated in Tamil Nadu has homology with BTV-2 isolated in Africa; whereas the BTV-23 isolated in this area has homology with BTV-23 from South East Asia, indicating that both Eastern and Western topotypes of BTV are circulating in ruminant population in Tamil Nadu.

  11. Expert study to select indicators of the occurrence of emerging mycotoxin hazards.

    PubMed

    Kandhai, M C; Booij, C J H; Van der Fels-Klerx, H J

    2011-01-01

    This article describes a Delphi-based expert judgment study aimed at the selection of indicators to identify the occurrence of emerging mycotoxin hazards related to Fusarium spp. in wheat supply chains. A panel of 29 experts from 12 European countries followed a holistic approach to evaluate the most important indicators for different chain stages (growth, transport and storage, and processing) and their relative importance. After three e-mailing rounds, the experts reached consensus on the most important indicators for each of the three stages: wheat growth, transport and storage, and processing. For wheat growth, these indicators include: relative humidity/rainfall, crop rotation, temperature, tillage practice, water activity of the kernels, and crop variety/cultivar. For the transport and storage stage, they include water activity in the kernels, relative humidity, ventilation, temperature, storage capacity, and logistics. For wheat processing, indicators include quality data, fraction of the cereal used, water activity in the kernels, quality management and traceability systems, and carryover of contamination. The indicators selected in this study can be used in an identification system for the occurrence of emerging mycotoxin hazards in wheat supply chains. Such a system can be used by risk managers within governmental (related) organizations and/or the food and feed industry in order to react proactively to the occurrence of these emerging mycotoxins. © 2010 Society for Risk Analysis.

  12. Climate change and occurrence of diarrheal diseases: evolving facts from Nepal.

    PubMed

    Bhandari, G P; Gurung, S; Dhimal, M; Bhusal, C L

    2012-09-01

    Climate change is becoming huge threat to health especially for those from developing countries. Diarrhea as one of the major diseases linked with changing climate. This study has been carried out to assess the relationship between climatic variables, and malaria and to find out the range of non-climatic factors that can confound the relationship of climate change and human health. It is a Retrospective study where data of past ten years relating to climate and disease (diarrhea) variable were analyzed. The study conducted trend analysis based on correlation. The climate related data were obtained from Department of Hydrology and Meteorology. Time Series analysis was also being conducted. The trend of number of yearly cases of diarrhea has been increasing from 1998 to 2001 after which the cases remain constant till 2006.The climate types in Jhapa vary from humid to per-humid based on the moisture index and Mega-thermal based on thermal efficiency. The mean annual temperature is increasing at an average of 0.04 °C/year with maximum temperature increasing faster than the minimum temperature. The annual total rainfall of Jhapa is decreasing at an average rate of -7.1 mm/year. Statistically significant correlation between diarrheal cases occurrence and temperature and rainfall has been observed. However, climate variables were not the significant predictors of diarrheal occurrence. The association among climate variables and diarrheal disease occurrence cannot be neglected which has been showed by this study. Further prospective longitudinal study adjusting influence of non-climatic factors is recommended.

  13. Debris flow occurrence and sediment persistence, Upper Colorado River Valley, CO

    USGS Publications Warehouse

    Grimsley, Kyle J; Rathburn, Sara L.; Friedman, Jonathan M.; Mangano, Joseph F.

    2016-01-01

    Debris flow magnitudes and frequencies are compared across the Upper Colorado River valley to assess influences on debris flow occurrence and to evaluate valley geometry effects on sediment persistence. Dendrochronology, field mapping, and aerial photographic analysis are used to evaluate whether a 19th century earthen, water-conveyance ditch has altered the regime of debris flow occurrence in the Colorado River headwaters. Identifying any shifts in disturbance processes or changes in magnitudes and frequencies of occurrence is fundamental to establishing the historical range of variability (HRV) at the site. We found no substantial difference in frequency of debris flows cataloged at eleven sites of deposition between the east (8) and west (11) sides of the Colorado River valley over the last century, but four of the five largest debris flows originated on the west side of the valley in association with the earthen ditch, while the fifth is on a steep hillslope of hydrothermally altered rock on the east side. These results suggest that the ditch has altered the regime of debris flow activity in the Colorado River headwaters as compared to HRV by increasing the frequency of debris flows large enough to reach the Colorado River valley. Valley confinement is a dominant control on response to debris flows, influencing volumes of aggradation and persistence of debris flow deposits. Large, frequent debris flows, exceeding HRV, create persistent effects due to valley geometry and geomorphic setting conducive to sediment storage that are easily delineated by valley confinement ratios which are useful to land managers.

  14. Debris Flow Occurrence and Sediment Persistence, Upper Colorado River Valley, CO

    NASA Astrophysics Data System (ADS)

    Grimsley, K. J.; Rathburn, S. L.; Friedman, J. M.; Mangano, J. F.

    2016-07-01

    Debris flow magnitudes and frequencies are compared across the Upper Colorado River valley to assess influences on debris flow occurrence and to evaluate valley geometry effects on sediment persistence. Dendrochronology, field mapping, and aerial photographic analysis are used to evaluate whether a 19th century earthen, water-conveyance ditch has altered the regime of debris flow occurrence in the Colorado River headwaters. Identifying any shifts in disturbance processes or changes in magnitudes and frequencies of occurrence is fundamental to establishing the historical range of variability (HRV) at the site. We found no substantial difference in frequency of debris flows cataloged at eleven sites of deposition between the east (8) and west (11) sides of the Colorado River valley over the last century, but four of the five largest debris flows originated on the west side of the valley in association with the earthen ditch, while the fifth is on a steep hillslope of hydrothermally altered rock on the east side. These results suggest that the ditch has altered the regime of debris flow activity in the Colorado River headwaters as compared to HRV by increasing the frequency of debris flows large enough to reach the Colorado River valley. Valley confinement is a dominant control on response to debris flows, influencing volumes of aggradation and persistence of debris flow deposits. Large, frequent debris flows, exceeding HRV, create persistent effects due to valley geometry and geomorphic setting conducive to sediment storage that are easily delineated by valley confinement ratios which are useful to land managers.

  15. Debris Flow Occurrence and Sediment Persistence, Upper Colorado River Valley, CO.

    PubMed

    Grimsley, K J; Rathburn, S L; Friedman, J M; Mangano, J F

    2016-07-01

    Debris flow magnitudes and frequencies are compared across the Upper Colorado River valley to assess influences on debris flow occurrence and to evaluate valley geometry effects on sediment persistence. Dendrochronology, field mapping, and aerial photographic analysis are used to evaluate whether a 19th century earthen, water-conveyance ditch has altered the regime of debris flow occurrence in the Colorado River headwaters. Identifying any shifts in disturbance processes or changes in magnitudes and frequencies of occurrence is fundamental to establishing the historical range of variability (HRV) at the site. We found no substantial difference in frequency of debris flows cataloged at eleven sites of deposition between the east (8) and west (11) sides of the Colorado River valley over the last century, but four of the five largest debris flows originated on the west side of the valley in association with the earthen ditch, while the fifth is on a steep hillslope of hydrothermally altered rock on the east side. These results suggest that the ditch has altered the regime of debris flow activity in the Colorado River headwaters as compared to HRV by increasing the frequency of debris flows large enough to reach the Colorado River valley. Valley confinement is a dominant control on response to debris flows, influencing volumes of aggradation and persistence of debris flow deposits. Large, frequent debris flows, exceeding HRV, create persistent effects due to valley geometry and geomorphic setting conducive to sediment storage that are easily delineated by valley confinement ratios which are useful to land managers.

  16. The distribution, occurrence and environmental effect of mercury in Chinese coals

    USGS Publications Warehouse

    Zheng, Lingyun; Liu, Gaisheng; Chou, C.-L.

    2007-01-01

    Mercury (Hg) is a toxic, persistent, and globally distributed pollutant due to its characteristic properties such as low melting and boiling points, conversion between chemical forms and participation in biological cycles. During combustion mercury in coal is almost totally emitted to the atmosphere. With a huge amount of coal consumed, coal combustion is one of the main anthropogenic sources of this element in the environment. In this study, Hg data of 1699 coal samples of China has been compiled, and the concentration, distribution, modes of occurrence, and the impact of Hg emissions on the environment are investigated. Most Chinese coals have Hg content in the range of 0.1 to 0.3??ppm, with an average of 0.19??ppm, which is slightly higher than the average Hg content of world coals and is close to that of the U.S. coals. The Hg content in coals varies in different coal basins, geological ages and coal ranks. The most likely mode of occurrences of Hg in high-sulfur and high Hg content coals is as solid solution in pyrite. But in low-sulfur coals, modes of occurrence of Hg are variable, and the organic-bound and sulfide-bound Hg may dominate. Silicate-bound Hg may be the main form in some coals because of magmatic intrusion. Mercury emissions during coal combustion have resulted in serious environmental contamination in China, particularly in the northeastern and southwestern China, where a high Hg content in the atmosphere occurs. ?? 2007 Elsevier B.V. All rights reserved.

  17. On the Occurrence of Afternoon Counter Electrojet Over Indian Longitudes During June Solstice in Solar Minimum

    NASA Astrophysics Data System (ADS)

    Pandey, Kuldeep; Sekar, R.; Anandarao, B. G.; Gupta, S. P.; Chakrabarty, D.

    2018-03-01

    Studies made earlier using ground-based observations of geomagnetic field over the Indian longitudes revealed that the occurrence of equatorial counter electrojet (CEJ) events in afternoon hours is more frequent during June solstice (May-June-July-August) in solar minimum than in other periods. In general, the June solstice solar minimum CEJ events occur between 1500 local time (LT) and 1800 LT with peak strength of about -10 nT at around 1600 LT. In order to understand the frequent occurrence of these CEJ events, an investigation is carried out using an equatorial electrojet model (Anandarao, 1976, https://doi.org/10.1029/GL003i009p00545) and the empirical vertical drift model by Fejer et al. (2008, https://doi.org/10.1029/2007JA012801). The strength, duration, peak value, and the occurrence time of CEJ obtained using electrojet model match remarkably well with the corresponding observation of average geomagnetic field variations. The occurrence of CEJ is found to be due to solar quiet (Sq) electric field in the westward direction which is manifested as downward drift in Fejer et al. (2008, https://doi.org/10.1029/2007JA012801) model output during 1500-1800 LT. Further, the occurrence of afternoon reversal of Sq electric field in this season is shown to be consistent with earlier studies from Indian sector. Therefore, this investigation provides explicit evidence for the role of westward Sq electric field on the generation of afternoon CEJ during June solstice in solar minimum periods over the Indian sector indicating the global nature of these CEJ events.

  18. Multinomial Logistic Regression Predicted Probability Map To Visualize The Influence Of Socio-Economic Factors On Breast Cancer Occurrence in Southern Karnataka

    NASA Astrophysics Data System (ADS)

    Madhu, B.; Ashok, N. C.; Balasubramanian, S.

    2014-11-01

    Multinomial logistic regression analysis was used to develop statistical model that can predict the probability of breast cancer in Southern Karnataka using the breast cancer occurrence data during 2007-2011. Independent socio-economic variables describing the breast cancer occurrence like age, education, occupation, parity, type of family, health insurance coverage, residential locality and socioeconomic status of each case was obtained. The models were developed as follows: i) Spatial visualization of the Urban- rural distribution of breast cancer cases that were obtained from the Bharat Hospital and Institute of Oncology. ii) Socio-economic risk factors describing the breast cancer occurrences were complied for each case. These data were then analysed using multinomial logistic regression analysis in a SPSS statistical software and relations between the occurrence of breast cancer across the socio-economic status and the influence of other socio-economic variables were evaluated and multinomial logistic regression models were constructed. iii) the model that best predicted the occurrence of breast cancer were identified. This multivariate logistic regression model has been entered into a geographic information system and maps showing the predicted probability of breast cancer occurrence in Southern Karnataka was created. This study demonstrates that Multinomial logistic regression is a valuable tool for developing models that predict the probability of breast cancer Occurrence in Southern Karnataka.

  19. Stochastic Modeling based on Dictionary Approach for the Generation of Daily Precipitation Occurrences

    NASA Astrophysics Data System (ADS)

    Panu, U. S.; Ng, W.; Rasmussen, P. F.

    2009-12-01

    The modeling of weather states (i.e., precipitation occurrences) is critical when the historical data are not long enough for the desired analysis. Stochastic models (e.g., Markov Chain and Alternating Renewal Process (ARP)) of the precipitation occurrence processes generally assume the existence of short-term temporal-dependency between the neighboring states while implying the existence of long-term independency (randomness) of states in precipitation records. Existing temporal-dependent models for the generation of precipitation occurrences are restricted either by the fixed-length memory (e.g., the order of a Markov chain model), or by the reining states in segments (e.g., persistency of homogenous states within dry/wet-spell lengths of an ARP). The modeling of variable segment lengths and states could be an arduous task and a flexible modeling approach is required for the preservation of various segmented patterns of precipitation data series. An innovative Dictionary approach has been developed in the field of genome pattern recognition for the identification of frequently occurring genome segments in DNA sequences. The genome segments delineate the biologically meaningful ``words" (i.e., segments with a specific patterns in a series of discrete states) that can be jointly modeled with variable lengths and states. A meaningful “word”, in hydrology, can be referred to a segment of precipitation occurrence comprising of wet or dry states. Such flexibility would provide a unique advantage over the traditional stochastic models for the generation of precipitation occurrences. Three stochastic models, namely, the alternating renewal process using Geometric distribution, the second-order Markov chain model, and the Dictionary approach have been assessed to evaluate their efficacy for the generation of daily precipitation sequences. Comparisons involved three guiding principles namely (i) the ability of models to preserve the short-term temporal-dependency in

  20. The effect of atmospheric temperature and pressure on the occurrence of acute myocardial infarction in Kaunas.

    PubMed

    Radišauskas, Ričardas; Vaičiulis, Vidmantas; Ustinavičienė, Rūta; Bernotienė, Gailutė

    2013-01-01

    OBJECTIVE. The aim of the study was to evaluate the impact of meteorological variables (atmospheric temperature and pressure) on the daily occurrence of acute myocardial infarction (AMI). MATERIAL AND METHODS. The study used the daily values of atmospheric temperature and pressure in 2000-2007. The meteorological data were obtained from the Lithuanian Hydrometeorological Service for Kaunas. The relative risks of event occurrence were computed for 5°C atmospheric temperature and for 10-hPa atmospheric pressure variations by means of the Poisson regression model. RESULTS. The occurrence of AMI and atmospheric temperature showed an inverse linear relationship, while the occurrence of AMI and atmospheric pressure, a positive linear relationship. Among the youngest subjects (25-44 years old), no relationships were detected. Contrary, among the subjects aged 45-64 years and those aged 65 years and older, the occurrence of AMI significantly decreased with higher temperature (P=0.001 and P=0.002, respectively). A decrease in atmospheric temperature by 10ºC reduced the risk of AMI by 8.7% in the age groups of 45-64 and 65 years and older and by 19% in the age group of 25 years and older. Among the first AMI cases, the risk increased by 7.5% in the age group of 45-64-year olds and by 6.4% in the age group of 25-64-year olds. The relationship between atmospheric temperature and pressure, and AMI occurrence was found to be linear but inverse. An increase in atmospheric pressure by 10 hPa resulted in an increase in risk by 4% among the subjects aged 65 years and more and by 3% among the subjects aged 25 years and more. CONCLUSIONS. Atmospheric temperature and pressure variations had the greatest effect on middle-aged and aging subjects (starting from 45 years). At younger age, the effect of such factors on the AMI risk was considerably lower.

  1. Minerals in the gut: scoping a Cambrian digestive system

    NASA Astrophysics Data System (ADS)

    Strang, K. M.; Armstrong, H. A.; Harper, D. A. T.

    2016-11-01

    The Sirius Passet Lagerstätte of North Greenland contains the first exceptionally preserved mat-ground community of the Cambrian, dominated, in terms of abundance, by trilobites but particularly characterized by iconic arthropods and lobopods, some also occurring in the Burgess shale. High-resolution photography, scanning electron imaging and elemental mapping have been carried out on a variety of specimens of the non-mineralized arthropod Campanamuta mantonae (Budd 2011 J. Syst. Palaeontol. 9, 217-260 (doi:10.1080/14772019.2010.492644)) which has three-dimensional gut and muscle preservation. Results show that the guts contain a high concentration of calcium phosphate (approximating to the mineral francolite), whereas the adjacent muscles are silicified. This indicates a unique, tissue-specific taphonomy for this Cambrian taxon. We hypothesize that the precipitation of calcium phosphate in the guts occurs rapidly after death by `crystal seed' processes in suboxic, slightly acidic conditions; critically, the gut wall remained intact during precipitation. We postulate that the calcium phosphate was derived from ingested cellular material. Silicification of the muscles followed as the localized water chemistry became saturated in silica, high in Fe2+, and low in oxygen and sulfate. We document here the unique occurrence of two distinct but mechanistically similar taphonomic pathways within a diverse suite of possibilities in an Early Cambrian Lagerstätte.

  2. Modelling the probability of ionospheric irregularity occurrence over African low latitude region

    NASA Astrophysics Data System (ADS)

    Mungufeni, Patrick; Jurua, Edward; Bosco Habarulema, John; Anguma Katrini, Simon

    2015-06-01

    This study presents models of geomagnetically quiet time probability of occurrence of ionospheric irregularities over the African low latitude region. GNSS-derived ionospheric total electron content data from Mbarara, Uganda (0.60°S, 30.74°E, geographic, 10.22°S, magnetic) and Libreville, Gabon (0.35°N, 9.68°E, geographic, 8.05°S, magnetic) during the period 2001-2012 were used. First, we established the rate of change of total electron content index (ROTI) value associated with background ionospheric irregularity over the region. This was done by analysing GNSS carrier-phases at L-band frequencies L1 and L2 with the aim of identifying cycle slip events associated with ionospheric irregularities. We identified at both stations a total of 699 events of cycle slips. The corresponding median ROTI value at the epochs of the cycle slip events was 0.54 TECU/min. The probability of occurrence of ionospheric irregularities associated with ROTI ≥ 0.5 TECU / min was then modelled by fitting cubic B-splines to the data. The aspects the model captured included diurnal, seasonal, and solar flux dependence patterns of the probability of occurrence of ionospheric irregularities. The model developed over Mbarara was validated with data over Mt. Baker, Uganda (0.35°N, 29.90°E, geographic, 9.25°S, magnetic), Kigali, Rwanda (1.94°S, 30.09°E, geographic, 11.62°S, magnetic), and Kampala, Uganda (0.34°N, 32.60°E, geographic, 9.29°S, magnetic). For the period validated at Mt. Baker (approximately, 137.64 km, north west), Kigali (approximately, 162.42 km, south west), and Kampala (approximately, 237.61 km, north east) the percentages of the number of errors (difference between the observed and the modelled probability of occurrence of ionospheric irregularity) less than 0.05 are 97.3, 89.4, and 81.3, respectively.

  3. Black Earths (Terra Preta): Observations of wider occurrence from natural fire

    USDA-ARS?s Scientific Manuscript database

    Recently, the occurrence of fertile dark-colored soils in the Amazon (Anthropogenic Dark Earths or terra preta de Indio) has been associated with prehistoric anthropogenic soil modification through long term additions of black carbon and other organic amendments from both agricultural and waste mana...

  4. Harsh Corporal Punishment of Yemeni Children: Occurrence, Type and Associations

    ERIC Educational Resources Information Center

    Alyahri, Abdullah; Goodman, Robert

    2008-01-01

    Objective: To examine the occurrence, type and associations of harsh corporal punishment in Yemen. Methods: Caregiver and teacher reports were obtained on 1,196 Yemeni 7-10-year olds obtained by systematic random sampling of children in the 1st to 4th grades of urban and rural schools. Caregivers (86% mothers) reported on disciplinary practices,…

  5. Positive emotion, appraisal, and the role of appraisal overlap in positive emotion co-occurrence.

    PubMed

    Tong, Eddie M W; Jia, Lile

    2017-02-01

    Appraisal research has traditionally focused on negative emotions but has not addressed issues concerning the relationships between several positive emotions and appraisals in daily life and the extent to which co-occurrence of positive emotions can be explained by overlap in appraisals. Driven by a priori hypotheses on appraisal-emotion relationships, this study investigated 12 positive emotions and 13 appraisal dimensions using Ecological Momentary Assessment. The results provide strong evidence that positive emotions and appraisals correlate significantly in daily life. Importantly, we found that the positive emotions' overlap on theoretically relevant, as compared to irrelevant, appraisals was stronger and more predictive of their co-occurrence. Furthermore, appraisal overlap on theoretically relevant appraisals predicted the co-occurrence of positive emotions even when the appraisal of pleasantness was excluded, indicating that positive emotions do not co-occur just by virtue of their shared valence. Our findings affirmed and refined the appraisal profiles of positive emotions and underscore the importance of appraisals in accounting for the commonality and differences among positive emotions. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  6. Muddy floods in Saxony: occurrence, damages and costs

    NASA Astrophysics Data System (ADS)

    Arévalo, S. A.; Reichel, S.; Schindewolf, M.; Schmidt, J.

    2012-04-01

    A muddy flood is a natural hazard with small impact area. Usually a single event covers only a part of a street and some properties, in some cases it might affect up to a whole neighbourhood. Due to this small spatial extend the public awareness is generally low. On the other hand we know from random reports that in some areas, like the Saxon loess belt region, muddy floods do occur repeatedly. The damages caused by muddy floods range from mud covered streets to flooded cellars and houses. Although the awareness of muddy floods in Europe has increased during the last decade, there is still very few information about frequency, spatial extend and the related costs. There have been investigations of muddy flood occurrence in some European countries like England, France, Belgium, Poland and Slovakia, but there is no information available about the muddy flood occurrence in Germany. That is because German state departments do not usually register muddy floods and neither do insurance companies. The only institution that is almost always informed when muddy floods occur are local fire brigades. That is why in this investigation an enquiry of all fire brigades in the study area of the Saxon hilly loess region was performed. The aim was to gain first information about the general dimension of the problem, a temporal and spatial distribution as well as a first appraisal of costs. The obtained database of muddy floods will also serve for further investigation of the problem.

  7. Spatial Heterogeneity of Habitat Suitability for Rift Valley Fever Occurrence in Tanzania: An Ecological Niche Modelling Approach

    PubMed Central

    Sindato, Calvin; Stevens, Kim B.; Karimuribo, Esron D.; Mboera, Leonard E. G.; Paweska, Janusz T.; Pfeiffer, Dirk U.

    2016-01-01

    Background Despite the long history of Rift Valley fever (RVF) in Tanzania, extent of its suitable habitat in the country remains unclear. In this study we investigated potential effects of temperature, precipitation, elevation, soil type, livestock density, rainfall pattern, proximity to wild animals, protected areas and forest on the habitat suitability for RVF occurrence in Tanzania. Materials and Methods Presence-only records of 193 RVF outbreak locations from 1930 to 2007 together with potential predictor variables were used to model and map the suitable habitats for RVF occurrence using ecological niche modelling. Ground-truthing of the model outputs was conducted by comparing the levels of RVF virus specific antibodies in cattle, sheep and goats sampled from locations in Tanzania that presented different predicted habitat suitability values. Principal Findings Habitat suitability values for RVF occurrence were higher in the northern and central-eastern regions of Tanzania than the rest of the regions in the country. Soil type and precipitation of the wettest quarter contributed equally to habitat suitability (32.4% each), followed by livestock density (25.9%) and rainfall pattern (9.3%). Ground-truthing of model outputs revealed that the odds of an animal being seropositive for RVFV when sampled from areas predicted to be most suitable for RVF occurrence were twice the odds of an animal sampled from areas least suitable for RVF occurrence (95% CI: 1.43, 2.76, p < 0.001). Conclusion/Significance The regions in the northern and central-eastern Tanzania were more suitable for RVF occurrence than the rest of the regions in the country. The modelled suitable habitat is characterised by impermeable soils, moderate precipitation in the wettest quarter, high livestock density and a bimodal rainfall pattern. The findings of this study should provide guidance for the design of appropriate RVF surveillance, prevention and control strategies which target areas with

  8. Occurrence of Deoxynivalenol and Zearalenone in Commercial Fish Feed: An Initial Study

    PubMed Central

    Pietsch, Constanze; Kersten, Susanne; Burkhardt-Holm, Patricia; Valenta, Hana; Dänicke, Sven

    2013-01-01

    The control of mycotoxins is a global challenge not only in human consumption but also in nutrition of farm animals including aquatic species. Fusarium toxins, such as deoxynivalenol (DON) and zearalenone (ZEN), are common contaminants of animal feed but no study reported the occurrence of both mycotoxins in fish feed so far. Here, we report for the first time the occurrence of DON and ZEN in samples of commercial fish feed designed for nutrition of cyprinids collected from central Europe. A maximal DON concentration of 825 μg kg−1 feed was found in one feed whereas average values of 289 μg kg−1 feed were noted. ZEN was the more prevalent mycotoxin but the concentrations were lower showing an average level of 67.9 μg kg−1 feed. PMID:23325300

  9. Are there co-occurrence patterns that structure snake communities in Central Brazil?

    PubMed

    França, F G R; Araújo, A F B

    2007-02-01

    The main factors that structure Neotropical animal communities have been the subject of discussion in ecology communities. We used a set of null models to investigate the existence of structure in snake communities from the Cerrado in Central Brazil in relation to the co-occurrence of species and guilds concerning specific resources. We used fragments (conservation units) inside the Distrito Federal and neighbor municipalities. In spite of recent human colonization in the region from the end of the 1950s, intense habitat modification and fragmentation has taken place. Sixty three snake species are present in the Distrito Federal. Co-occurrence analysis of species and guilds associated to snake diets and habitats suggested a lack of organization. The homogeneity of habitats in Central Brazil and the minor importance of ecological effects can lead to random arrangement.

  10. OCCURRENCE, GENOTOXICITY, AND CARCINOGENICITY OF EMERGING DISINFECTION BY-PRODUCTS IN DRINKING WATER: A REVIEW AND ROADMAP FOR RESEARCH

    EPA Science Inventory

    Occurrence, Genotoxicity, and Carcinogenicity of Emerging Disinfection By-products in Drinking Water: A Review and Roadmap for Research
    Summary of Paper
    What is study?
    This is the first review of the 30 year's research effort on the occurrence, genotoxicity,...

  11. Non-random co-occurrence of native and exotic plant species in Mediterranean grasslands

    NASA Astrophysics Data System (ADS)

    de Miguel, José M.; Martín-Forés, Irene; Acosta-Gallo, Belén; del Pozo, Alejandro; Ovalle, Carlos; Sánchez-Jardón, Laura; Castro, Isabel; Casado, Miguel A.

    2016-11-01

    Invasion by exotic species in Mediterranean grasslands has determined assembly patterns of native and introduced species, knowledge of which provides information on the ecological processes underlying these novel communities. We considered grasslands from Spain and Chile. For each country we considered the whole grassland community and we split species into two subsets: in Chile, species were classified as natives or colonizers (i.e. exotics); in Spain, species were classified as exclusives (present in Spain but not in Chile) or colonizers (Spanish natives and exotics into Chile). We used null models and co-occurrence indices calculated in each country for each one of 15 sites distributed along a precipitation gradient and subjected to similar silvopastoral exploitation. We compared values of species co-occurrence between countries and between species subsets (natives/colonizers in Chile; exclusives/colonizers in Spain) within each country and we characterised them according to climatic variables. We hypothesized that: a) the different coexistence time of the species in both regions should give rise to communities presenting a spatial pattern further from random in Spain than in Chile, b) the co-occurrence patterns in the grasslands are affected by mesoclimatic factors in both regions. The patterns of co-occurrence are similar in Spain and Chile, mostly showing a spatial pattern more segregated than expected by random. The colonizer species are more segregated in Spain than in Chile, possibly determined by the longer residence time of the species in the source area than in the invaded one. The segregation of species in Chile is related to water availability, being species less segregated in habitat with greater water deficit; in Spain no relationship with climatic variables was found. After an invasion process, our results suggest that the possible process of alteration of the original Chilean communities has not prevented the assembly between the native and

  12. Occurrence of 3-chloro-propane-1,2-diol (3-MCPD) and related compounds in foods: a review.

    PubMed

    Hamlet, C G; Sadd, P A; Crews, C; Velísek, J; Baxter, D E

    2002-07-01

    A critical review of the occurrence of 3-chloro-propane-1,2-diol (3-MCPD) in foods not known to contain hydrolysed vegetable proteins is presented. The review covers the properties and chemistry of 3-MCPD and the current methods of analysis in foodstuffs. The results of UK surveys of 3-MCPD occurrence in both retail foods and commercial food ingredients are discussed with particular reference to cereal, meat and dairy products. The possible mechanisms for the formation and decay of 3-MCPD in foods are suggested. The review does not cover the detailed toxicology of 3-MCPD and its occurrence in hydrolysed vegetable proteins, which have been considered elsewhere, nor possible issues such as in-vivo formation.

  13. Stability and Occurrence Rate Constraints on the Planetary Sculpting Hypothesis for “Transitional” Disks

    NASA Astrophysics Data System (ADS)

    Dong, Ruobing; Dawson, Rebekah

    2016-07-01

    Transitional disks, protoplanetary disks with deep and wide central gaps, may be the result of planetary sculpting. By comparing numerical planet-opening-gap models with observed gaps, we find systems of 3-6 giant planets are needed in order to open gaps with the observed depths and widths. We explore the dynamical stability of such multi-planet systems using N-body simulations that incorporate prescriptions for gas effects. We find they can be stable over a typical disk lifetime, with the help of eccentricity damping from the residual gap gas that facilitates planets locking into mean motion resonances. However, in order to account for the occurrence rate of transitional disks, the planet sculpting scenario demands gap-opening-friendly disk conditions, in particular, a disk viscosity α ≲ 0.001. In addition, the demography of giant planets at ˜3-30 au separations, poorly constrained by current data, has to largely follow occurrence rates extrapolated outward from radial velocity surveys, not the lower occurrence rates extrapolated inward from direct imaging surveys. Even with the most optimistic occurrence rates, transitional disks cannot be a common phase that most gas disks experience at the end of their life, as popularly assumed, simply because there are not enough planets to open these gaps. Finally, as consequences of demanding almost all giant planets at large separations participate in transitional disk sculpting, the majority of such planets must form early and end up in a chain of mean motion resonances at the end of disk lifetime.

  14. On the relationship between positive and negative affect: Their correlation and their co-occurrence.

    PubMed

    Larsen, Jeff T; Hershfield, Hal E; Stastny, Bradley J; Hester, Neil

    2017-03-01

    Understanding the nature of emotional experience requires understanding the relationship between positive and negative affect. Two particularly important aspects of that relationship are the extent to which positive and negative affect are correlated with one another and the extent to which they co-occur. Some researchers have assumed that weak negative correlations imply greater co-occurrence (i.e., more mixed emotions) than do strong negative correlations, but others have noted that correlations may imply very little about co-occurrence. We investigated the relationship between the correlation between positive and negative affect and co-occurrence. Participants in each of 2 samples provided moment-to-moment happiness and sadness ratings as they watched an evocative film and listened to music. Results indicated (a) that 4 measures of the correlation between positive and negative affect were quite highly related to 1 another; (b) that the strength of the correlation between measures of mixed emotions varied considerably; (c) that correlational measures were generally (but not always) weakly correlated with mixed emotion measures; and (d) that bittersweet stimuli consistently led to elevations in mixed emotion measures but did not consistently weaken the correlation between positive and negative affect. Results highlight that the correlation between positive and negative affect and their co-occurrence are distinct aspects of the relationship between positive and negative affect. Such insight helps clarify the implications of existing work on age-related and cultural differences in emotional experience and sets the stage for greater understanding of the experience of mixed emotions. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

  15. Climate-driven variability in the occurrence of major floods across North America and Europe

    NASA Astrophysics Data System (ADS)

    Hodgkins, Glenn A.; Whitfield, Paul H.; Burn, Donald H.; Hannaford, Jamie; Renard, Benjamin; Stahl, Kerstin; Fleig, Anne K.; Madsen, Henrik; Mediero, Luis; Korhonen, Johanna; Murphy, Conor; Wilson, Donna

    2017-09-01

    Concern over the potential impact of anthropogenic climate change on flooding has led to a proliferation of studies examining past flood trends. Many studies have analysed annual-maximum flow trends but few have quantified changes in major (25-100 year return period) floods, i.e. those that have the greatest societal impacts. Existing major-flood studies used a limited number of very large catchments affected to varying degrees by alterations such as reservoirs and urbanisation. In the current study, trends in major-flood occurrence from 1961 to 2010 and from 1931 to 2010 were assessed using a very large dataset (>1200 gauges) of diverse catchments from North America and Europe; only minimally altered catchments were used, to focus on climate-driven changes rather than changes due to catchment alterations. Trend testing of major floods was based on counting the number of exceedances of a given flood threshold within a group of gauges. Evidence for significant trends varied between groups of gauges that were defined by catchment size, location, climate, flood threshold and period of record, indicating that generalizations about flood trends across large domains or a diversity of catchment types are ungrounded. Overall, the number of significant trends in major-flood occurrence across North America and Europe was approximately the number expected due to chance alone. Changes over time in the occurrence of major floods were dominated by multidecadal variability rather than by long-term trends. There were more than three times as many significant relationships between major-flood occurrence and the Atlantic Multidecadal Oscillation than significant long-term trends.

  16. Climate-driven variability in the occurrence of major floods across North America and Europe

    USGS Publications Warehouse

    Hodgkins, Glenn A.; Whitfield, Paul H.; Burn, Donald H.; Hannaford, Jamie; Renard, Benjamin; Stahl, Kerstin; Fleig, Anne K.; Madsen, Henrik; Mediero, Luis; Korhonen, Johanna; Murphy, Conor; Wilson, Donna

    2017-01-01

    Concern over the potential impact of anthropogenic climate change on flooding has led to a proliferation of studies examining past flood trends. Many studies have analysed annual-maximum flow trends but few have quantified changes in major (25–100 year return period) floods, i.e. those that have the greatest societal impacts. Existing major-flood studies used a limited number of very large catchments affected to varying degrees by alterations such as reservoirs and urbanisation. In the current study, trends in major-flood occurrence from 1961 to 2010 and from 1931 to 2010 were assessed using a very large dataset (>1200 gauges) of diverse catchments from North America and Europe; only minimally altered catchments were used, to focus on climate-driven changes rather than changes due to catchment alterations. Trend testing of major floods was based on counting the number of exceedances of a given flood threshold within a group of gauges. Evidence for significant trends varied between groups of gauges that were defined by catchment size, location, climate, flood threshold and period of record, indicating that generalizations about flood trends across large domains or a diversity of catchment types are ungrounded. Overall, the number of significant trends in major-flood occurrence across North America and Europe was approximately the number expected due to chance alone. Changes over time in the occurrence of major floods were dominated by multidecadal variability rather than by long-term trends. There were more than three times as many significant relationships between major-flood occurrence and the Atlantic Multidecadal Oscillation than significant long-term trends.

  17. Analytical framework for reconstructing heterogeneous environmental variables from mammal community structure.

    PubMed

    Louys, Julien; Meloro, Carlo; Elton, Sarah; Ditchfield, Peter; Bishop, Laura C

    2015-01-01

    We test the performance of two models that use mammalian communities to reconstruct multivariate palaeoenvironments. While both models exploit the correlation between mammal communities (defined in terms of functional groups) and arboreal heterogeneity, the first uses a multiple multivariate regression of community structure and arboreal heterogeneity, while the second uses a linear regression of the principal components of each ecospace. The success of these methods means the palaeoenvironment of a particular locality can be reconstructed in terms of the proportions of heavy, moderate, light, and absent tree canopy cover. The linear regression is less biased, and more precisely and accurately reconstructs heavy tree canopy cover than the multiple multivariate model. However, the multiple multivariate model performs better than the linear regression for all other canopy cover categories. Both models consistently perform better than randomly generated reconstructions. We apply both models to the palaeocommunity of the Upper Laetolil Beds, Tanzania. Our reconstructions indicate that there was very little heavy tree cover at this site (likely less than 10%), with the palaeo-landscape instead comprising a mixture of light and absent tree cover. These reconstructions help resolve the previous conflicting palaeoecological reconstructions made for this site. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. A Content Analysis of Visual Aesthetics' Occurrences in Instructional Design Textbooks

    ERIC Educational Resources Information Center

    Brown, Lori A.

    2010-01-01

    Visual aesthetics in instructional design was defined for the purposes of this dissertation by the design actions of contrast, alignment, repetition, and proximity (CARP), insofar as they contribute to learning experience. Occurrences of visual aesthetics were identified and analyzed in three frequently required, graduate-level textbooks in…

  19. Visualizing the Structure of Medical Informatics Using Term Co-Occurrence Analysis.

    ERIC Educational Resources Information Center

    Morris, Theodore Allan

    2000-01-01

    Examines the structure of medical informatics and the relationship between biomedicine and information science and information technology. Uses co-occurrence analysis of subject headings assigned to items indexed for MEDLINE as well as multidimensional scaling to show seven to eight broad multidisciplinary subject clusters. (Contains 28…

  20. Occurrence of antibiotics in an agricultural watershed in south-central Idaho

    USDA-ARS?s Scientific Manuscript database

    The polar organic compound integrative sampler (POCIS) is a tool that has been effectively used to passively sample organic pollutants in water. In this study, POCIS were used to investigate the occurrence of 21 veterinary and human antibiotics and a beta agonist (ractopamine) in irrigation return f...

  1. Co-Occurrence of Language and Behavioural Change in Frontotemporal Lobar Degeneration.

    PubMed

    Harris, Jennifer M; Jones, Matthew; Gall, Claire; Richardson, Anna M T; Neary, David; du Plessis, Daniel; Pal, Piyali; Mann, David M A; Snowden, Julie S; Thompson, Jennifer C

    2016-01-01

    We aimed to evaluate the co-occurrence of language and behavioural impairment in patients with frontotemporal lobar degeneration (FTLD) spectrum pathology. Eighty-one dementia patients with pathological confirmation of FTLD were identified. Anonymized clinical records from patients' first assessment were rated for language and behavioural features from frontotemporal dementia consensus criteria, primary progressive aphasia (PPA) criteria and 1998 FTLD criteria. Over 90% of patients with FTLD pathology exhibited a combination of at least one behavioural and one language feature. Changes in language, in particular, were commonly accompanied by behavioural change. Notably, the majority of patients who displayed language features characteristic of semantic variant PPA exhibited 'early perseverative, stereotyped or compulsive/ritualistic behaviour'. Moreover, 'executive/generation deficits with relative sparing of memory and visuospatial functions' occurred in most patients with core features of non-fluent variant PPA. Behavioural and language symptoms frequently co-occur in patients with FTLD pathology. Current classifications, which separate behavioural and language syndromes, do not reflect this co-occurrence.

  2. An occurrence model for the national assessment of volcanogenic beryllium deposits

    USGS Publications Warehouse

    Foley, Nora K.; Seal, Robert R.; Piatak, Nadine M.; Hetland, Brianna

    2010-01-01

    The general occurrence model summarized here is intended to provide a descriptive basis for the identification and assessment of undiscovered beryllium deposits of a type and style similar to those found at Spor Mountain, Juab County, Utah. The assessment model is restricted in its application in order to provide a coherent basis for assessing the probability of the occurrence of similar economic deposits using the current U.S. Geological Survey methodology. The model is intended to be used to identify tracts of land where volcanogenic epithermal replacement-type beryllium deposits hosted by metaluminous to peraluminous rhyolite are most likely to occur. Only a limited number of deposits or districts of this type are known, and only the ores of the Spor Mountain district have been studied in detail. The model highlights those distinctive aspects and features of volcanogenic epithermal beryllium deposits that pertain to the development of assessment criteria and puts forward a baseline analysis of the geoenvironmental consequences of mining deposits of this type.

  3. Detection of stable community structures within gut microbiota co-occurrence networks from different human populations.

    PubMed

    Jackson, Matthew A; Bonder, Marc Jan; Kuncheva, Zhana; Zierer, Jonas; Fu, Jingyuan; Kurilshikov, Alexander; Wijmenga, Cisca; Zhernakova, Alexandra; Bell, Jordana T; Spector, Tim D; Steves, Claire J

    2018-01-01

    Microbes in the gut microbiome form sub-communities based on shared niche specialisations and specific interactions between individual taxa. The inter-microbial relationships that define these communities can be inferred from the co-occurrence of taxa across multiple samples. Here, we present an approach to identify comparable communities within different gut microbiota co-occurrence networks, and demonstrate its use by comparing the gut microbiota community structures of three geographically diverse populations. We combine gut microbiota profiles from 2,764 British, 1,023 Dutch, and 639 Israeli individuals, derive co-occurrence networks between their operational taxonomic units, and detect comparable communities within them. Comparing populations we find that community structure is significantly more similar between datasets than expected by chance. Mapping communities across the datasets, we also show that communities can have similar associations to host phenotypes in different populations. This study shows that the community structure within the gut microbiota is stable across populations, and describes a novel approach that facilitates comparative community-centric microbiome analyses.

  4. Lunettes: A Global Inventory of Their Occurrence and Characteristics

    NASA Astrophysics Data System (ADS)

    Rhodes, D. D.

    2012-12-01

    Lunettes (including "clay dunes") form along the downwind margins of saline pans. As landforms they were little studied and poorly understood until the mid-20th century when they attracted the attention of Australian geomorphologists, notably James W. Bowler. During the last 40 years, lunettes have been studied extensively as indicators of climate change. Their occurrence has now been documented on every continent except Antarctica. Inspection of more than 100 research sites using Google Earth has led to the recognition that lunettes occur in three definable, though somewhat overlapping, settings. Playas and lunettes are common features of closed basins having sub-humid climates. Large basins with internal drainage due to structural deformation produce the most extensive and complex lake and dune systems (e.g., the Etosha Pan, northern Namibia; Soda Lake, Carrizo Plain, California). In these settings, the large central basin is associated with lunettes that may be more than 10 km long and as much as 50 m high. Tens of lunette ridges may mark former lake levels and channels of the desiccated drainage system. Some basins lack external drainage for hydrological reasons (low precipitation, drainage diversion, etc.). These hydrologically closed basins may also host saline lakes and lunettes (e.g., Lake Malheur, Oregon) though they are generally smaller and less complex. Shallow depressions may occur by the thousands on the surface of arid and semi-arid plains such as Brazil's Pantanal, and the Kalahari and Transvaal of southern Africa, the High Plains of Texas and New Mexico, and several parts of Australia. Although they have not been described in the literature, pans also cover large areas in China, Tibet, and Mongolia. Multiple theories have been advanced to explain the occurrence of plains pans including deflation, piping, subsidence, and animal activity. In the plains setting, pans can occur in large numbers, up to 100 per 100 km2 and may cover 20% or more of the

  5. Occurrence of azoxystrobin, propiconazole, and selected other fungicides in US streams, 2005-2006

    USGS Publications Warehouse

    Battaglin, William A.; Sandstrom, Mark W.; Kuivila, Kathryn; Kolpin, Dana W.; Meyer, Michael T.

    2011-01-01

    Fungicides are used to prevent foliar diseases on a wide range of vegetable, field, fruit, and ornamental crops. They are generally more effective as protective rather than curative treatments, and hence tend to be applied before infections take place. Less than 1% of US soybeans were treated with a fungicide in 2002 but by 2006, 4% were treated. Like other pesticides, fungicides can move-off of fields after application and subsequently contaminate surface water, groundwater, and associated sediments. Due to the constant pressure from fungal diseases such as the recent Asian soybean rust outbreak, and the always-present desire to increase crop yields, there is the potential for a significant increase in the amount of fungicides used on US farms. Increased fungicide use could lead to increased environmental concentrations of these compounds. This study documents the occurrence of fungicides in select US streams soon after the first documentation of soybean rust in the US and prior to the corresponding increase in fungicide use to treat this problem. Water samples were collected from 29 streams in 13 states in 2005 and/or 2006, and analyzed for 12 target fungicides. Nine of the 12 fungicides were detected in at least one stream sample and at least one fungicide was detected in 20 of 29 streams. At least one fungicide was detected in 56% of the 103 samples, as many as five fungicides were detected in an individual sample, and mixtures of fungicides were common. Azoxystrobin was detected most frequently (45% of 103 samples) followed by metalaxyl (27%), propiconazole (17%), myclobutanil (9%), and tebuconazole (6%). Fungicide detections ranged from 0.002 to 1.15 μ/L. There was indication of a seasonal pattern to fungicide occurrence, with detections more common and concentrations higher in late summer and early fall than in spring. At a few sites, fungicides were detected in all samples collected suggesting the potential for season-long occurrence in some streams

  6. [Sexual violence and co-occurrences suffered by children and adolescents: study of incidents over a decade].

    PubMed

    de Oliveira, Jacqueline Reiter; Costa, Maria Conceição Oliveira; Amaral, Magali Teresópolis Reis; Santos, Clarice Alves; de Assis, Simone Gonçalves; do Nascimento, Ohana Cunha

    2014-03-01

    The study analyzes the evolution of the incidence of sexual violence (SV) and co-occurrences between 2001 and 2010. The records of the Guardianship Councils in Feira de Santana, State of Bahia, Brazil were used and the incidence rates and graphs of the events during the period were calculated. Of the total of the different types of violence, 21.8 % involved co-occurrences, the majority being female, most frequently during adolescence. There was a high proportion of abuse in male children, with most offenders bring family members or acquaintances. The incidence of SV revealed an increasing trend in both sexes during the decade, more significantly in females in 2002 and 2009. The age groups indicated the same trend, with a higher proportion of cases in adolescence. The record of co-occurrences with SV was more pronounced in the second half of the decade, namely psychological violence in 2008, neglect in 2008 and physical violence in 2009. The conclusion is that the increase in the coefficients of sexual violence and co-occurrences may indicate an improvement of the reporting system of instances in reference, as well as greater citizen participation through the Dial 100 complaint hotline. The indicators help to prevent and control violence against children.

  7. Solar Flare Occurrence Rate and Probability in Terms of the Sunspot Classification Supplemented with Sunspot Area and Its Changes

    NASA Astrophysics Data System (ADS)

    Lee, K.; Moon, Y.; Lee, J.; Na, H.; Lee, K.

    2013-12-01

    We investigate the solar flare occurrence rate and daily flare probability in terms of the sunspot classification supplemented with sunspot area and its changes. For this we use the NOAA active region data and GOES solar flare data for 15 years (from January 1996 to December 2010). We consider the most flare-productive 11 sunspot classes in the McIntosh sunspot group classification. Sunspot area and its changes can be a proxy of magnetic flux and its emergence/cancellation, respectively. We classify each sunspot group into two sub-groups by its area: 'Large' and 'Small'. In addition, for each group, we classify it into three sub-groups according to sunspot area changes: 'Decrease', 'Steady', and 'Increase'. As a result, in the case of compact groups, their flare occurrence rates and daily flare probabilities noticeably increase with sunspot group area. We also find that the flare occurrence rates and daily flare probabilities for the 'Increase' sub-groups are noticeably higher than those for the other sub-groups. In case of the (M + X)-class flares in the ';Dkc' group, the flare occurrence rate of the 'Increase' sub-group is three times higher than that of the 'Steady' sub-group. The mean flare occurrence rates and flare probabilities for all sunspot groups increase with the following order: 'Decrease', 'Steady', and 'Increase'. Our results statistically demonstrate that magnetic flux and its emergence enhance the occurrence of major solar flares.

  8. Relationship between food habits and tooth erosion occurrence in Malaysian University students.

    PubMed

    Manaf, Zahara Abdul; Lee, Mei Tee; Ali, Nor Hazirah Muhammad; Samynathan, Selvamary; Jie, Ying Phor; Ismail, Noor Hasnani; Bibiana Hui Ying, Yong; Wei Seng, Yeo; Yahya, Nurul Asyikin

    2012-04-01

    Tooth erosion is a growing dental problem; however, the role of diet in the aetiology of tooth erosion is unclear. A cross-sectional study was conducted to determine the association between tooth erosion occurrence and the consumption of acidic foods and drinks among undergraduate university students. A total of 150 undergraduate students (33 males and 117 females) aged 19 to 24 years at Universiti Kebangsaan Malaysia participated in this study. The Basic Erosive Wear Examination was used to assess the occurrence of tooth erosion. Information regarding dental hygiene practices, usual dietary habits, and consumption of acidic foods and drinks was obtained through a structured questionnaire. In all, 68% of subjects had tooth erosion. Subjects who reported having received information about healthy eating were less likely to have tooth erosion (χ(2) [1, N = 150] = 7.328, P = 0.007). The frequencies of milk (OR = 0.29, 95% CI = 0.13-0.67) and tea/coffee (adjusted OR = 0.42, 95% CI = 0.19-0.95) consumption were negatively associated with tooth erosion. Dental hygiene practice, the frequency and amount of acidic food and drink intake, and body mass index classification were not significantly associated with the risk of tooth erosion (P > 0.05). A high prevalence of tooth erosion was observed among this group of students. Preventive measures, such as dietary advice and increased consumption of milk at a younger age, may reduce the occurrence of tooth erosion among this age group.

  9. Seasonal occurrence and abundance of caridean shrimp larvae at Helgoland, German Bight

    NASA Astrophysics Data System (ADS)

    Wehrtmann, Ingo S.

    1989-03-01

    Plankton samples were collected from January 1985 to January 1986 three times per week at Helgoland to study seasonal occurrence and abundance of caridean shrimp larvae. A total of eleven species were obtained. Ninety-one % of all larvae collected during the sample period belonged to Crangon crangon L. and Crangon allmanni Kinahan, 6% to Philocheras trispinosus Hailstone and 3% to the remaining eight species. Collections were generally dominated by C. crangon larvae. However, C. allmanni larvae were most abundant in June coinciding with hatching activities of the population near Helgoland. C. allmanni was observed to have the highest density of all species with approximately 8 larvae per m3. Larvae of Eualus occultus (Lebour), Eualus pusiolus (Kroyer), Hippolyte varians Leach and Athanas nitescens Leach were most likely released by populations inhabiting the rocky intertidal zone around Helgoland. The presence of Processa modica Williamson & Rochanaburanon and Processa nouveli holthuisi Al-Adhub & Williamson in the German Bight was verified by observations of a series of different developmental stages. Larvae of the rare species Caridion steveni Lebour were also recorded. The observed shrimp species were placed into three different groups with respect to their seasonal occurrence. Possible advantages of the timing of larval dispersal relative to predation and food availability are given. The results on seasonal occurrence and relative abundance are discussed in relation to environmental factors (temperature, salinity) as well as to the geographical distribution of the species.

  10. Aftershock occurrence rate decay for individual sequences and catalogs

    NASA Astrophysics Data System (ADS)

    Nyffenegger, Paul A.

    One of the earliest observations of the Earth's seismicity is that the rate of aftershock occurrence decays with time according to a power law commonly known as modified Omori-law (MOL) decay. However, the physical reasons for aftershock occurrence and the empirical decay in rate remain unclear despite numerous models that yield similar rate decay behavior. Key problems in relating the observed empirical relationship to the physical conditions of the mainshock and fault are the lack of studies including small magnitude mainshocks and the lack of uniformity between studies. We use simulated aftershock sequences to investigate the factors which influence the maximum likelihood (ML) estimate of the Omori-law p value, the parameter describing aftershock occurrence rate decay, for both individual aftershock sequences and "stacked" or superposed sequences. Generally the ML estimate of p is accurate, but since the ML estimated uncertainty is unaffected by whether the sequence resembles an MOL model, a goodness-of-fit test such as the Anderson-Darling statistic is necessary. While stacking aftershock sequences permits the study of entire catalogs and sequences with small aftershock populations, stacking introduces artifacts. The p value for stacked sequences is approximately equal to the mean of the individual sequence p values. We apply single-link cluster analysis to identify all aftershock sequences from eleven regional seismicity catalogs. We observe two new mathematically predictable empirical relationships for the distribution of aftershock sequence populations. The average properties of aftershock sequences are not correlated with tectonic environment, but aftershock populations and p values do show a depth dependence. The p values show great variability with time, and large values or changes in p sometimes precedes major earthquakes. Studies of teleseismic earthquake catalogs over the last twenty years have led seismologists to question seismicity models and

  11. Occurrence of Surface Water Contaminations: An Overview

    NASA Astrophysics Data System (ADS)

    Shahabudin, M. M.; Musa, S.

    2018-04-01

    Water is a part of our life and needed by all organisms. As time goes by, the needs by human increased transforming water quality into bad conditions. Surface water contaminated in various ways which is pointed sources and non-pointed sources. Pointed sources means the source are distinguished from the source such from drains or factory but the non-pointed always occurred in mixed of elements of pollutants. This paper is reviewing the occurrence of the contaminations with effects that occurred around us. Pollutant factors from natural or anthropology factors such nutrients, pathogens, and chemical elements contributed to contaminations. Most of the effects from contaminated surface water contributed to the public health effects also to the environments.

  12. Occurrence of cyanobacteria, microcystin, and taste-and-odor compounds in Cheney Reservoir, Kansas, 2001-16

    USGS Publications Warehouse

    Graham, Jennifer L.; Foster, Guy M.; Williams, Thomas J.; Kramer, Ariele R.; Harris, Theodore D.

    2017-03-31

    Cheney Reservoir, located in south-central Kansas, is one of the primary drinking-water supplies for the city of Wichita and an important recreational resource. Since 1990, cyanobacterial blooms have been present occasionally in Cheney Reservoir, resulting in increased treatment costs and decreased recreational use. Cyanobacteria, the cyanotoxin microcystin, and the taste-and-odor compounds geosmin and 2-methylisoborneol have been measured in Cheney Reservoir by the U.S. Geological Survey, in cooperation with the city of Wichita, for about 16 years. The purpose of this report is to describe the occurrence of cyanobacteria, microcystin, and taste-and-odor compounds in Cheney Reservoir during May 2001 through June 2016 and to update previously published logistic regression models that used continuous water-quality data to estimate the probability of microcystin and geosmin occurrence above relevant thresholds.Cyanobacteria, microcystin, and geosmin were detected in about 84, 52, and 31 percent of samples collected in Cheney Reservoir during May 2001 through June 2016, respectively. 2-methylisoborneol was less common, detected in only 3 percent of samples. Microcystin and geosmin concentrations exceeded advisory values of concern more frequently than cyanobacterial abundance; therefore, cyanobacteria are not a good indicator of the presence of these taste-and-odor compounds in Cheney Reservoir. Broad seasonal patterns in cyanobacteria and microcystin were evident, though abundance and concentration varied by orders of magnitude across years. Cyanobacterial abundances generally peaked in late summer or early fall (August through October), and smaller peaks were observed in winter (January through February). In a typical year, microcystin was first detected in June or July, increased to its seasonal maxima in the summer (July through September), and then decreased. Seasonal patterns in geosmin were less consistent than cyanobacteria and microcystin, but geosmin

  13. The trajectory of scientific discovery: concept co-occurrence and converging semantic distance.

    PubMed

    Cohen, Trevor; Schvaneveldt, Roger W

    2010-01-01

    The paradigm of literature-based knowledge discovery originated by Swanson involves finding meaningful associations between terms or concepts that have not occurred together in any previously published document. While several automated approaches have been applied to this problem, these generally evaluate the literature at a point in time, and do not evaluate the role of change over time in distributional statistics as an indicator of meaningful implicit associations. To address this issue, we develop and evaluate Symmetric Random Indexing (SRI), a novel variant of the Random Indexing (RI) approach that is able to measure implicit association over time. SRI is found to compare favorably to existing RI variants in the prediction of future direct co-occurrence. Summary statistics over several experiments suggest a trend of converging semantic distance prior to the co-occurrence of key terms for two seminal historical literature-based discoveries.

  14. Joint estimation of habitat dynamics and species interactions: Disturbance reduces co-occurrence of non-native predators with an endangered toad

    USGS Publications Warehouse

    Miller, David A.W.; Brehme, Cheryl S.; Hines, James E.; Nichols, James D.; Fisher, Robert N.

    2012-01-01

    1. Ecologists have long been interested in the processes that determine patterns of species occurrence and co-occurrence. Potential short-comings of many existing empirical approaches that address these questions include a reliance on patterns of occurrence at a single time point, failure to account properly for imperfect detection and treating the environment as a static variable.2. We fit detection and non-detection data collected from repeat visits using a dynamic site occupancy model that simultaneously accounts for the temporal dynamics of a focal prey species, its predators and its habitat. Our objective was to determine how disturbance and species interactions affect the co-occurrence probabilities of an endangered toad and recently introduced non-native predators in stream breeding habitats. For this, we determined statistical support for alternative processes that could affect co-occurrence frequency in the system.3. We collected occurrence data at stream segments in two watersheds where streams were largely ephemeral and one watershed dominated by perennial streams. Co-occurrence probabilities of toads with non-native predators were related to disturbance frequency, with low co-occurrence in the ephemeral watershed and high co-occurrence in the perennial watershed. This occurred because once predators were established at a site, they were rarely lost from the site except in cases when the site dried out. Once dry sites became suitable again, toads colonized them much more rapidly than predators, creating a period of predator-free space.4. We attribute the dynamics to a storage effect, where toads persisting outside the stream environment during periods of drought rapidly colonized sites when they become suitable again. Our results support that even in highly connected stream networks, temporal disturbance can structure frequencies with which breeding amphibians encounter non-native predators.5. Dynamic multi-state occupancy models are a powerful

  15. Joint estimation of habitat dynamics and species interactions: disturbance reduces co-occurrence of non-native predators with an endangered toad.

    PubMed

    Miller, David A W; Brehme, Cheryl S; Hines, James E; Nichols, James D; Fisher, Robert N

    2012-11-01

    1. Ecologists have long been interested in the processes that determine patterns of species occurrence and co-occurrence. Potential short-comings of many existing empirical approaches that address these questions include a reliance on patterns of occurrence at a single time point, failure to account properly for imperfect detection and treating the environment as a static variable. 2. We fit detection and non-detection data collected from repeat visits using a dynamic site occupancy model that simultaneously accounts for the temporal dynamics of a focal prey species, its predators and its habitat. Our objective was to determine how disturbance and species interactions affect the co-occurrence probabilities of an endangered toad and recently introduced non-native predators in stream breeding habitats. For this, we determined statistical support for alternative processes that could affect co-occurrence frequency in the system. 3. We collected occurrence data at stream segments in two watersheds where streams were largely ephemeral and one watershed dominated by perennial streams. Co-occurrence probabilities of toads with non-native predators were related to disturbance frequency, with low co-occurrence in the ephemeral watershed and high co-occurrence in the perennial watershed. This occurred because once predators were established at a site, they were rarely lost from the site except in cases when the site dried out. Once dry sites became suitable again, toads colonized them much more rapidly than predators, creating a period of predator-free space. 4. We attribute the dynamics to a storage effect, where toads persisting outside the stream environment during periods of drought rapidly colonized sites when they become suitable again. Our results support that even in highly connected stream networks, temporal disturbance can structure frequencies with which breeding amphibians encounter non-native predators. 5. Dynamic multi-state occupancy models are a powerful tool

  16. Predicting Occurrence of Spine Surgery Complications Using "Big Data" Modeling of an Administrative Claims Database.

    PubMed

    Ratliff, John K; Balise, Ray; Veeravagu, Anand; Cole, Tyler S; Cheng, Ivan; Olshen, Richard A; Tian, Lu

    2016-05-18

    Postoperative metrics are increasingly important in determining standards of quality for physicians and hospitals. Although complications following spinal surgery have been described, procedural and patient variables have yet to be incorporated into a predictive model of adverse-event occurrence. We sought to develop a predictive model of complication occurrence after spine surgery. We used longitudinal prospective data from a national claims database and developed a predictive model incorporating complication type and frequency of occurrence following spine surgery procedures. We structured our model to assess the impact of features such as preoperative diagnosis, patient comorbidities, location in the spine, anterior versus posterior approach, whether fusion had been performed, whether instrumentation had been used, number of levels, and use of bone morphogenetic protein (BMP). We assessed a variety of adverse events. Prediction models were built using logistic regression with additive main effects and logistic regression with main effects as well as all 2 and 3-factor interactions. Least absolute shrinkage and selection operator (LASSO) regularization was used to select features. Competing approaches included boosted additive trees and the classification and regression trees (CART) algorithm. The final prediction performance was evaluated by estimating the area under a receiver operating characteristic curve (AUC) as predictions were applied to independent validation data and compared with the Charlson comorbidity score. The model was developed from 279,135 records of patients with a minimum duration of follow-up of 30 days. Preliminary assessment showed an adverse-event rate of 13.95%, well within norms reported in the literature. We used the first 80% of the records for training (to predict adverse events) and the remaining 20% of the records for validation. There was remarkable similarity among methods, with an AUC of 0.70 for predicting the occurrence of

  17. Occurrence of acidic PPCPs in surface and drinking waters by UHPLC-MS/MS

    NASA Astrophysics Data System (ADS)

    Picó, Yolanda; Carmona, Eric; Andreu, Vicente

    2015-04-01

    The term "emerging pollutants" stands for the substances that are released in the environment for which currently no regulations are established for their environmental monitoring. Their occurrence is reported worldwide in a range of aquatic environments, such as lakes, rivers, freshwater catchments, estuaries, reservoirs and marine waters. However, there are still few studies on their occurrence, levels and distribution in River Basins from Spain. This study is aimed at contributing information on the occurrence of three groups of emerging contaminants -licit and illicit drugs and personal care products- in the Turia River Basin. This River is a 280-km Mediterranean River with a flow rate 10.43 m3/s (Carmona et al., 2011), which is born in the province of Teruel and flows near the Valencia city. It has been selected because it is a typical Mediterranean River heavily affected by drought. The most 14 drank waters in Spain were analyzed to determinate the occurrence of some emerging pollutants. Selected contaminants include more than 40 pharmaceuticals, 5 personal care products and two illicit drugs. These substances were determined with an Agilent Technologies HPLC linked with a Triple Quad LC/MS in positive and negative ion mode using for compound separation a Waters C18 analytical column of 2.1x50mm and 3.5 µm particle diameter from Sunfire. The optimal mobile phase was a gradient of 5mM Ammonium fluoride in water (mobile phase A) and 5mM Ammonium fluoride in methanol (mobile phase B), at a flow rate of 0.2mL/min with a gradient that starts with 30% of mobile phase B and increase until 95% at minute 12 and remains 13 minutes more. The analytes were extracted from 250 mL of water by solid-phase extraction using Strata-X cartridges, eluted with methanol, evaporated and dissolved in 250 µL of methanol (Carmona et al. 2014). This procedure provides acceptable recoveries (>70%) and relative standard deviation (RSDs < 20%) at the limits of quantification, which are

  18. Assessment of Fire Occurrence and Future Fire Potential in Arctic Alaska

    NASA Astrophysics Data System (ADS)

    French, N. H. F.; Jenkins, L. K.; Loboda, T. V.; Bourgeau-Chavez, L. L.; Whitley, M. A.

    2014-12-01

    An analysis of the occurrence of fire in Alaskan tundra was completed using the relatively complete historical record of fire for the region from 1950 to 2013. Spatial fire data for Alaskan tundra regions were obtained from the Alaska Large Fire Database for the region defined from vegetation and ecoregion maps. A detailed presentation of fire records available for assessing the fire regime of the tundra regions of Alaska as well as results evaluating fire size, seasonality, and general geographic and temporal trends is included. Assessment of future fire potential was determined for three future climate scenarios at four locations across the Alaskan tundra using the Canadian Forest Fire Weather Index (FWI). Canadian Earth System Model (CanESM2) weather variables were used for historical (1850-2005) and future (2006-2100) time periods. The database includes 908 fire points and 463 fire polygons within the 482,931 km2 of Alaskan tundra. Based on the polygon database 25,656 km2 (6,340,000 acres) has burned across the six tundra ecoregions since 1950. Approximately 87% of tundra fires start in June and July across all ecoregions. Combining information from the polygon and points data records, the estimated average fire size for fire in the Alaskan Arctic region is 28.1 km2 (7,070 acres), which is much smaller than in the adjacent boreal forest region, averaging 203 km2 for high fire years. The largest fire in the database is the Imuruk Basin Fire which burned 1,680 km2 in 1954 in the Seward Peninsula region (Table 1). Assessment of future fire potential shows that, in comparison with the historical fire record, fire occurrence in Alaskan tundra is expected to increase under all three climate scenarios. Occurrences of high fire weather danger (>10 FWI) are projected to increase in frequency and magnitude in all regions modeled. The changes in fire weather conditions are expected to vary from one region to another in seasonal occurrence as well as severity and frequency

  19. Hierarchical spatial models of abundance and occurrence from imperfect survey data

    USGS Publications Warehouse

    Royle, J. Andrew; Kery, M.; Gautier, R.; Schmid, Hans

    2007-01-01

    Many estimation and inference problems arising from large-scale animal surveys are focused on developing an understanding of patterns in abundance or occurrence of a species based on spatially referenced count data. One fundamental challenge, then, is that it is generally not feasible to completely enumerate ('census') all individuals present in each sample unit. This observation bias may consist of several components, including spatial coverage bias (not all individuals in the Population are exposed to sampling) and detection bias (exposed individuals may go undetected). Thus, observations are biased for the state variable (abundance, occupancy) that is the object of inference. Moreover, data are often sparse for most observation locations, requiring consideration of methods for spatially aggregating or otherwise combining sparse data among sample units. The development of methods that unify spatial statistical models with models accommodating non-detection is necessary to resolve important spatial inference problems based on animal survey data. In this paper, we develop a novel hierarchical spatial model for estimation of abundance and occurrence from survey data wherein detection is imperfect. Our application is focused on spatial inference problems in the Swiss Survey of Common Breeding Birds. The observation model for the survey data is specified conditional on the unknown quadrat population size, N(s). We augment the observation model with a spatial process model for N(s), describing the spatial variation in abundance of the species. The model includes explicit sources of variation in habitat structure (forest, elevation) and latent variation in the form of a correlated spatial process. This provides a model-based framework for combining the spatially referenced samples while at the same time yielding a unified treatment of estimation problems involving both abundance and occurrence. We provide a Bayesian framework for analysis and prediction based on the

  20. Predicting wildfire occurrence distribution with spatial point process models and its uncertainty assessment: a case study in the Lake Tahoe Basin, USA

    Treesearch

    Jian Yang; Peter J. Weisberg; Thomas E. Dilts; E. Louise Loudermilk; Robert M. Scheller; Alison Stanton; Carl Skinner

    2015-01-01

    Strategic fire and fuel management planning benefits from detailed understanding of how wildfire occurrences are distributed spatially under current climate, and from predictive models of future wildfire occurrence given climate change scenarios. In this study, we fitted historical wildfire occurrence data from 1986 to 2009 to a suite of spatial point process (SPP)...

  1. Predicting the Occurrence of Stalking in Relationships Characterized by Domestic Violence

    ERIC Educational Resources Information Center

    Melton, Heather C.

    2007-01-01

    A high correlation has been found between domestic violence and stalking. However, very few studies have examined what factors predict the occurrence of stalking in relationships characterized by domestic violence. Using in-depth interviews with victims of domestic violence whose cases have gone through the criminal justice system, this article…

  2. Reported Historic Asbestos Mines, Historic Asbestos Prospects, and Natural Asbestos Occurrences in the Southwestern United States (Arizona, Nevada, and Utah)

    USGS Publications Warehouse

    Van Gosen, Bradley S.

    2008-01-01

    This map and its accompanying dataset provide information for 113 natural asbestos occurrences in the Southwestern United States (U.S.), using descriptions found in the geologic literature. Data on location, mineralogy, geology, and relevant literature for each asbestos site are provided. Using the map and digital data in this report, the user can examine the distribution of previously reported asbestos occurrences and their geological characteristics in the Southwestern U.S., which includes sites in Arizona, Nevada, and Utah. This report is part of an ongoing study by the U.S. Geological Survey to identify and map reported natural asbestos occurrences in the U.S., which thus far includes similar maps and datasets of natural asbestos occurrences within the Eastern U.S. (http://pubs.usgs.gov/of/2005/1189/), the Central U.S. (http://pubs.usgs.gov/of/2006/1211/), and the Rocky Mountain States (http://pubs.usgs.gov/of/2007/1182/. These reports are intended to provide State and local government agencies and other stakeholders with geologic information on natural occurrences of asbestos in the U.S.

  3. A multilayer network analysis of hashtags in twitter via co-occurrence and semantic links

    NASA Astrophysics Data System (ADS)

    Türker, Ilker; Sulak, Eyüb Ekmel

    2018-02-01

    Complex network studies, as an interdisciplinary framework, span a large variety of subjects including social media. In social networks, several mechanisms generate miscellaneous structures like friendship networks, mention networks, tag networks, etc. Focusing on tag networks (namely, hashtags in twitter), we made a two-layer analysis of tag networks from a massive dataset of Twitter entries. The first layer is constructed by converting the co-occurrences of these tags in a single entry (tweet) into links, while the second layer is constructed converting the semantic relations of the tags into links. We observed that the universal properties of the real networks like small-world property, clustering and power-law distributions in various network parameters are also evident in the multilayer network of hashtags. Moreover, we outlined that co-occurrences of hashtags in tweets are mostly coupled with semantic relations, whereas a small number of semantically unrelated, therefore random links reduce node separation and network diameter in the co-occurrence network layer. Together with the degree distributions, the power-law consistencies of degree difference, edge weight and cosine similarity distributions in both layers are also appealing forms of Zipf’s law evident in nature.

  4. Synchronous occurrence of advanced adenocarcinoma with a stromal tumor in the stomach: a case report.

    PubMed

    Salemis, Nikolaos S; Gourgiotis, Stavros; Tsiambas, Evangelos; Karameris, Andreas; Tsohataridis, Efstathios

    2008-06-01

    Gastrointestinal stromal tumors (GISTs) are rare mesenchymal neoplasms of the digestive tract. Synchronous occurrence of a gastrointestinal stromal tumor with a tumor of different histogenesis is very rare and has been documented in the literature mainly in case reports. We present the case of a 78-year old female patient who underwent surgery for an advanced gastric carcinoma during which a gastric stromal tumor was incidentally discovered. A review of the literature is also conducted on the extremely rare synchronous occurrence of malignant tumors of different histogenesis in the stomach.

  5. Areas of natural occurrence of Melipona scutellaris Latreille, 1811 (Hymenoptera: Apidae) in the state of Bahia, Brazil.

    PubMed

    Alves, Rogério M O; Carvalho, Carlos A L; Souza, Bruno A; Santos, Wyratan S

    2012-09-01

    The bee Melipona scutellaris is considered the reared meliponine species with the largest distribution in the North and Northeast regions of Brazil, with records from the state of Rio Grande do Norte down to the state of Bahia. Considering the importance of this species in the generation of income for family agriculture and in the preservation of areas with natural vegetation, this study aimed at providing knowledge on the distribution of natural colonies of M. scutellaris in the state of Bahia. Literature information, interviews with stinglessbee beekeepers, and expeditions were conducted to confirm the natural occurrence of the species. A total of 102 municipalities showed records for M. scutellaris, whose occurrence was observed in areas ranging from sea level up to 1,200-meter height. The occurrence of this species in the state of Bahia is considered to be restricted to municipalities on the coastal area and the Chapada Diamantina with its rainforests. Geographic coordinates, elevation, climate and vegetation data were obtained, which allowed a map to be prepared for the area of occurrence in order to support conservation and management policies for the species.

  6. Basic Fibroblast Growth Factor Predicts Cardiovascular Disease Occurrence in Participants from the Veterans Affairs Diabetes Trial

    PubMed Central

    Zimering, Mark B.; Anderson, Robert J.; Ge, Ling; Moritz, Thomas E.; Duckworth, William C.

    2013-01-01

    Aim: Cardiovascular disease (CVD) is a leading cause of morbidity and mortality in adults with type 2 diabetes mellitus. The aim of the present study was to test whether plasma basic fibroblast growth factor (bFGF) levels predict future CVD occurrence in adults from the Veterans Affairs Diabetes Trial (VADT). Methods: Nearly 400 veterans, 40 years of age or older having a mean baseline diabetes duration of 11.4 years were recruited from outpatient clinics at six geographically distributed sites in the VADT. Within the VADT, they were randomly assigned to intensive or standard glycemic treatment, with follow-up as much as seven and one-half years. CVD occurrence was examined at baseline in the patient population and during randomized treatment. Plasma bFGF was determined with a sensitive, specific two-site enzyme-linked immunoassay at the baseline study visit in all 399 subjects and repeated at the year 1 study visit in a randomly selected subset of 215 subjects. Results: One hundred and five first cardiovascular events occurred in these 399 subjects. The best fit model of risk factors associated with the time to first CVD occurrence (in the study) over a seven and one-half year period had as significant predictors: prior cardiovascular event [hazard ratio (HR) 3.378; 95% confidence intervals (CI) 3.079–3.807; P < 0.0001), baseline plasma bFGF (HR 1.008; 95% CI 1.002–1.014; P = 0.01), age (HR 1.027; 95% CI 1.004–1.051; P = 0.019), baseline plasma triglycerides (HR 1.001; 95% CI 1.000–1.002; P = 0.02), and diabetes duration-treatment interaction (P = 0.03). Intensive glucose-lowering was associated with significantly decreased hazard ratios for CVD occurrence (0.38–0.63) in patients with known diabetes duration of 0–10 years, and non-significantly increased hazard ratios for CVD occurrence (0.82–1.78) in patients with longer diabetes duration. Conclusion: High level of plasma bFGF is a predictive biomarker of future CVD

  7. Early Pleistocene occurrence of Acheulian technology in North China

    NASA Astrophysics Data System (ADS)

    Li, Xingwen; Ao, Hong; Dekkers, Mark J.; Roberts, Andrew P.; Zhang, Peng; Lin, Shan; Huang, Weiwen; Hou, Yamei; Zhang, Weihua; An, Zhisheng

    2017-01-01

    Acheulian tools with their associated level of cognizance heralded a major threshold in the evolution of hominin technology, culture and behavior. Thus, unraveling occurrence ages of Acheulian technology across different regions worldwide constitutes a key aspect of understanding the archeology of early human evolution. Here we present a magneto-cyclochronology for the Acheulian assemblage from Sanmenxia Basin, Loess Plateau, North China. Our results place a sequence of stable normal and reversed paleomagnetic polarities within a regional lithostratigraphic context. The Acheulian assemblage is dated to be older than the Matuyama-Brunhes boundary at 0.78 Ma, and is found in strata that are probably equivalent to a weak paleosol subunit within loess layer L9 in the Chinese loess-paleosol sequence, which corresponds to marine isotope stage (MIS) 23, a relatively subdued interglacial period with age range of ∼0.89-0.92 Ma. This age of ∼0.9 Ma implies that Acheulian stone tools were unambiguously present in North China during the Early Pleistocene. It distinctly enlarges the geographic distribution of Acheulian technology and brings its occurrence in North China back into the Early Pleistocene, which is contemporaneous with its first emergence in Europe. Combined with other archeological records, the larger area over which Acheulian technology existed in East Asia during the terminal Early Pleistocene has important implications for understanding early human occupation of North China.

  8. Occurrence features of simultaneous H+- and He+-band EMIC emissions in the outer radiation belt

    NASA Astrophysics Data System (ADS)

    Fu, Song; He, Fengming; Gu, Xudong; Ni, Binbin; Xiang, Zheng; Liu, Jiang

    2018-04-01

    As an important loss mechanism of radiation belt electrons, electromagnetic ion cyclotron (EMIC) waves show up as three distinct frequency bands below the hydrogen (H+), helium (He+), and oxygen (O+) ion gyrofrequencies. Compared to O+-band EMIC waves, H+- and He+-band emissions generally occur more frequently and result in more efficient scattering removal of <∼5 MeV relativistic electrons. Therefore, knowledge about the occurrence of these two bands is important for understanding the evolution of the relativistic electron population. To evaluate the occurrence pattern and wave properties of H+- and He+-band EMIC waves when they occur concurrently, we investigate 64 events of multi-band EMIC emissions identified from high quality Van Allen Probes wave data. Our quantitative results demonstrate a strong occurrence dependence of the multi-band EMIC emissions on magnetic local time (MLT) and L-shell to mainly concentrate on the dayside region of L = ∼4-6. We also find that the average magnetic field amplitude of H+-band waves is larger than that of He+-band waves only when L < 4.5 and AE∗ < 300 nT, and He+-band emissions are more intense under all other conditions. In contrast to 5 events that have average H+-band amplitude over 2 nT, 19 events exhibit >2 nT He+-band amplitude, indicating that the He+-band waves can be more easily amplified than the H+-band waves under the same circumstances. For simultaneous occurrences of the two EMIC wave bands, their frequencies vary with L-shell and geomagnetic activity: the peak wave frequency of H+-band emissions varies between 0.25 and 0.8 fcp with the average between 0.25 and 0.6 fcp, while that of He+-band emissions varies between 0.03 and 0.23 fcp with the average between 0.05 and 0.15 fcp. These newly observed occurrence features of simultaneous H+- and He+-band EMIC emissions provide improved information to quantify the overall contribution of multi-band EMIC waves to the loss processes of radiation belt electrons.

  9. Geologic occurrences of erionite in the United States: an emerging national public health concern for respiratory disease.

    PubMed

    Van Gosen, Bradley S; Blitz, Thomas A; Plumlee, Geoffrey S; Meeker, Gregory P; Pierson, M Patrick

    2013-08-01

    Erionite, a mineral series within the zeolite group, is classified as a Group 1 known respiratory carcinogen. This designation resulted from extremely high incidences of mesothelioma discovered in three small villages from the Cappadocia region of Turkey, where the disease was linked to environmental exposures to fibrous forms of erionite. Natural deposits of erionite, including fibrous forms, have been identified in the past in the western United States. Until recently, these occurrences have generally been overlooked as a potential hazard. In the last several years, concerns have emerged regarding the potential for environmental and occupational exposures to erionite in the United States, such as erionite-bearing gravels in western North Dakota mined and used to surface unpaved roads. As a result, there has been much interest in identifying locations and geologic environments across the United States where erionite occurs naturally. A 1996 U.S. Geological Survey report describing erionite occurrences in the United States has been widely cited as a compilation of all US erionite deposits; however, this compilation only focused on one of several geologic environments in which erionite can form. Also, new occurrences of erionite have been identified in recent years. Using a detailed literature survey, this paper updates and expands the erionite occurrences database, provided in a supplemental file (US_erionite.xls). Epidemiology, public health, and natural hazard studies can incorporate this information on known erionite occurrences and their characteristics. By recognizing that only specific geologic settings and formations are hosts to erionite, this knowledge can be used in developing management plans designed to protect the public.

  10. Geologic occurrences of erionite in the United States: an emerging national public health concern for respiratory disease

    USGS Publications Warehouse

    Van Gosen, Bradley S.; Blitz, Thomas A.; Plumlee, Geoffrey S.; Meeker, Gregory P.; Pierson, M. Patrick

    2013-01-01

    Erionite, a mineral series within the zeolite group, is classified as a Group 1 known respiratory carcinogen. This designation resulted from extremely high incidences of mesothelioma discovered in three small villages from the Cappadocia region of Turkey, where the disease was linked to environmental exposures to fibrous forms of erionite. Natural deposits of erionite, including fibrous forms, have been identified in the past in the western United States. Until recently, these occurrences have generally been overlooked as a potential hazard. In the last several years, concerns have emerged regarding the potential for environmental and occupational exposures to erionite in the United States, such as erionite-bearing gravels in western North Dakota mined and used to surface unpaved roads. As a result, there has been much interest in identifying locations and geologic environments across the United States where erionite occurs naturally. A 1996 U.S. Geological Survey report describing erionite occurrences in the United States has been widely cited as a compilation of all US erionite deposits; however, this compilation only focused on one of several geologic environments in which erionite can form. Also, new occurrences of erionite have been identified in recent years. Using a detailed literature survey, this paper updates and expands the erionite occurrences database, provided in a supplemental file (US_erionite.xls). Epidemiology, public health, and natural hazard studies can incorporate this information on known erionite occurrences and their characteristics. By recognizing that only specific geologic settings and formations are hosts to erionite, this knowledge can be used in developing management plans designed to protect the public.

  11. Quantitative co-occurrence of sesquiterpenes; a tool for elucidating their biosynthesis in Indian sandalwood, Santalum album.

    PubMed

    Jones, Christopher G; Ghisalberti, Emilio L; Plummer, Julie A; Barbour, Elizabeth L

    2006-11-01

    A chemotaxonomic approach was used to investigate biosynthetic relationships between heartwood sesquiterpenes in Indian sandalwood, Santalum album L. Strong, linear relationships exist between four structural classes of sesquiterpenes; alpha- and beta-santalenes and bergamotene; gamma- and beta-curcumene; beta-bisabolene and alpha-bisabolol and four unidentified sesquiterpenes. All samples within the heartwood yielded the same co-occurrence patterns, however wood from young trees tended to be more variable. It is proposed that the biosynthesis of each structural class of sesquiterpene in sandalwood oil is linked through common carbocation intermediates. Lack of co-occurrence between each structural class suggests that four separate cyclase enzymes may be operative. The biosynthesis of sandalwood oil sesquiterpenes is discussed with respect to these co-occurrence patterns. Extractable oil yield was correlated to heartwood content of each wood core and the oil composition did not vary significantly throughout the tree.

  12. The occurrence of Naegleria fowleri in recreational waters in Arizona.

    PubMed

    Sifuentes, Laura Y; Choate, Brittany L; Gerba, Charles P; Bright, Kelly R

    2014-09-19

    Naegleria fowleri is a free-living amoeba found in waters in warmer regions that causes primary amoebic meningoencephalitis, a rare but almost universally fatal disease. The goal of this project was to assess the occurrence of N. fowleri and other thermophilic amoebae in 33 recreational surface waters across Arizona to determine if their presence could be correlated with seasonal or other environmental factors. First, 1-L grab samples were collected over two years and analyzed using polymerase chain reaction and amoebae viability. Seasonality was observed, with N. fowleri and thermophilic amoebae (20% and 30%, respectively) being detected more often in the winter and spring combined than in the summer and fall combined (7.9% and 9.5%, respectively). The spring and fall both had an average temperature of 18°C, yet had different occurrence data (18.2% versus 5.9% for N. fowleri, respectively; 27.3% versus 0% for viable amoebae, respectively). These results are in stark contrast to previous studies in which N. fowleri has been found almost exclusively during warmer months. Over the two-year study, N. fowleri was detected in six and thermophilic amoebae in eight of the 33 recreational water bodies. Five of these were lakes near Phoenix that tested positive for N. fowleri and thermophilic amoebae over multiple seasons. These lakes differed significantly (P ≤ 0.05) from the other 28 surface waters, with a lower average temperature in the spring, a higher temperature in the fall, a higher pH and turbidity in the summer, and a lower electro-conductivity in the spring. They also had lower Escherichia coli and heterotrophic bacteria levels during colder months. Future N. fowleri monitoring in Arizona should focus on these five lakes to further elucidate the factors that contribute to the low occurrence of this amoeba in the summer or which might explain why these lakes appear to be reservoirs for the organism.

  13. Chapter 34: Offshore Occurrence Patterns of Marbled Murrelets in Central California

    Treesearch

    David G. Ainley; Sarah G. Allen; Larry B. Spear

    1995-01-01

    We assessed the occurrence patterns of Marbled Murrelets (Brachyramphus marmoratus) offshore of Waddell Creek, in central California. Data were derived primarily from cruises during the height of the murrelet breeding season, in June, between 1986 and 1994, as well as some cruises during the prebreeding period, February to early April. The large...

  14. The probability of occurrence of high-loss windstorms

    NASA Astrophysics Data System (ADS)

    Massey, Neil

    2016-04-01

    Windstorms are one of the largest meteorological risks to life and property in Europe. High - loss windstorms, in terms of insured losses, are a result of not only the windspeed of the storm but also the position and track of the storm. The two highest loss storms on record, Daria (1990) and Lothar (1999) caused so much damage because they tracked across highly populated areas of Europe. Although the frequency and intensity of high - loss wind storms in the observed record is known, there are not enough samples, due to the short observed record, to truly know the distribution of the frequency and intensity of windstorms over Europe and, by extension, the distribution of losses which could occur if the atmosphere had been in a different state due to the internal variability of the atmosphere. Risk and loss modelling exercises carried out by and for the reinsurance industry have typically stochastically perturbed the historical record of high - loss windstorms to produce distributions of potential windstorms with greater sample sizes than the observations. This poster presents a new method of generating many samples of potential windstorms and analyses the frequency of occurrence, intensity and potential losses of these windstorms. The large ensemble regional climate modelling project weather@home is used to generate many regional climate model representations (800 per year) of the weather over Europe between 1985 and 2010. The regional climate model is driven at the boundaries by a free running global climate model and so each ensemble member represents a potential state of the atmosphere, rather than an observed state. The winter storm season of October to March is analysed by applying an objective cyclone identification and tracking algorithm to each ensemble member. From the resulting tracks, the windspeed within a 1000km radius of the cyclone centre is extracted and the maximum windspeed over a 72 hour period is derived as the storm windspeed footprint. This

  15. Reliability and comparison of gain values with occurrence of saccades in the EyeSeeCam video head impulse test (vHIT).

    PubMed

    Korsager, Leise Elisabeth Hviid; Schmidt, Jesper Hvass; Faber, Christian; Wanscher, Jens Højberg

    2016-12-01

    The vHIT (video head impulse test) investigates the vestibular function in two ways: a VOR (vestibulo-ocular reflex) gain value and a head impulse diagram. From the diagram covert and overt saccades can be detected. Evaluation of the vestibular function based on vHIT depends on both parameters. There is a lack of knowledge regarding the reliability of the two parameters. The objective was to investigate the reliability of vHIT by comparing gain values between examiners on the same subjects, and to see how differences affected the occurrence of saccades. 25 subjects who had undergone cochlear implant (CI) surgery. Subjects were tested using the vHIT by two of four different examiners. Two judges interpreted the occurrence of saccades in the diagram. VOR gain values and the occurrence of saccades in the diagram. Differences in gain values between examiners varied from 0.2 to 0.58 with an average of 0.14 (95 % CI 0.12-0.16) on the right ear and 0.17 (95 % CI 0.15-0.19) on the left ear. Occurrences of saccades in the same patient were reproduced in 93 % of the cases by all examiners. Kappa's coefficient on the occurrence of saccades was 0.83. Interclass correlation coefficient (ICC) of the gain values between examiners ranged from 0.62 to 0.70. Differences in gain values amongst examiners did not seem to affect the occurrence of saccades in the same patient. The occurrence of saccades, therefore, seems to be more reliable than the gain value in the evaluation of the vestibular function. Interpretation of vHIT results should, therefore, first depend on the occurrence of saccades and second on the gain value.

  16. Temporal and Spatial Patterns of Preferential Flow Occurrence in the Shale Hills Catchment: From the Hillslope to the Catchment Scales

    NASA Astrophysics Data System (ADS)

    Liu, H.; Lin, H.

    2013-12-01

    Understanding temporal and spatial patterns of preferential flow (PF) occurrence is important in revealing hillslope and catchment hydrologic and biogeochemical processes. Quantitative assessment of the frequency and control of PF occurrence in the field, however, has been limited, especially at the landscape scale of hillslope and catchment. By using 5.5-years' (2007-2012) real-time soil moisture at 10 sites response to 323 precipitation events, we tested the temporal consistency of PF occurrence at the hillslope scale in the forested Shale Hills Catchment; and by using 25 additional sites with at least 1-year data (2011-2012), we evaluated the spatial patterns of PF occurrence across the catchment. To explore the potential effects of PF occurrence on catchment hydrology, wavelet analysis was performed on the recorded time series of hydrological signals (i.e., precipitation, soil moisture, catchment discharge). Considerable temporal consistence was observed in both the frequency and the main controls of PF occurrence at the hillslope scale, which was attributed largely to the statistical stability of precipitation pattern over the monitoring period and the relatively stable subsurface preferential pathways. Preferential flow tended to occur more often in response to intense rainfall events, and favored the conditions at dry hilltop or wet valley floor sites. When upscaling to the entire catchment, topographic control on the PF occurrence was amplified remarkably, leading to the identification of a subsurface PF network in the catchment. Higher frequency of PF occurrence was observed at the valley floor (average 48%), hilltop (average 46%), and swales/hillslopes near the stream (average 40%), while the hillslopes in the eastern part of the catchment were least likely to experience PF (0-20%). No clear relationship, however, was observed between terrain attributes and PF occurrence, because the initiation and persistency of PF in this catchment was controlled

  17. Amphibian occurrence and aquatic invaders in a changing landscape: Implications for wetland mitigation in the Willamette Valley, Oregon

    USGS Publications Warehouse

    Pearl, Christopher A.; Adams, Michael J.; Leuthold, N.; Bury, R. Bruce

    2005-01-01

    Despite concern about the conservation status of amphibians in western North America, few field studies have documented occurrence patterns of amphibians relative to potential stressors. We surveyed wetland fauna in Oregon's Willamette Valley and used an information theoretic approach (AIC) to rank the associations between native amphibian breeding occurrence and wetland characteristics, non-native aquatic predators, and landscape characteristics in a mixed urban-agricultural landscape. Best predictors varied among the five native amphibians and were generally consistent with life history differences. Pacific tree frog (Pseudacris regilla) and long-toed salamander (Ambystoma macrodactylum) occurrence was best predicted by the absence of non-native fish. Northern red-legged frog (Rana a. aurora) and northwestern salamander (Ambystoma gracile) were most strongly related to wetland vegetative characteristics. The occurrence of rough-skinned newts (Taricha granulosa), a migratory species that makes extensive use of terrestrial habitats, was best predicted by greater forest cover within 1 km. The absence of non-native fish was a strong predictor of occurrence for four of the five native species. In contrast, amphibians were not strongly related to native fish presence. We found little evidence supporting negative effects of the presence of breeding populations of bullfrog (Rana catesbeiana) on any native species. Only the two Ambystoma salamanders were associated with wetland permanence. Northwestern salamanders (which usually have a multi-year larval stage) were associated with permanent waters, while long-toed salamanders were associated with temporary wetlands. Although all the species make some use of upland habitats, only one (rough-skinned newt) was strongly associated with surrounding landscape conditions. Instead, our analysis suggests that within-wetland characteristics best predict amphibian occurrence in this region. We recommend that wetland preservation and

  18. Occurrence and quantification of Shiga toxin-producing Escherichia coli from food matrices

    PubMed Central

    Sethulekshmi, C.; Latha, C.; Anu, C. J.

    2018-01-01

    Aim: The objective of the study was to detect Shiga toxin-producing Escherichia coli (STEC) and develop a quantitative polymerase chain reaction (qPCR) assay to quantify the bacterial DNA present in different food matrices. Materials and Methods: A total of 758 samples were collected during a period from January 2015 to December 2016 from Kozhikode, Thrissur, and Alappuzha districts of Kerala. The samples consisted of raw milk (135), pasteurized milk (100), beef (132), buffalo meat (130), chevon (104), beef kheema (115), and beef sausage (42). All the samples collected were subjected to isolation and identification of STEC by conventional culture technique. Confirmation of virulence genes was carried out using PCR. For the quantification of STEC in different food matrices, a qPCR was standardized against stx1 gene of STEC by the construction of standard curve using SYBR green chemistry. Results: The overall occurrence of STEC in raw milk (n=135), beef (n=132), buffalo meat (n=130), chevon (n=104), and beef kheema (n=115) samples collected from Kozhikode, Thrissur, and Alappuzha districts of Kerala was 19.26%, 41.6%, 16.92%, 28.85%, and 41.74%, respectively. PCR revealed the presence of stx 1 and stx 2 genes in 88.46 and 83.64 and 30.77 and 40.00% of STEC isolates from raw milk and beef samples, respectively, while 100% of the STEC isolates from buffalo beef and beef kheema samples carried stx 1 gene. Real-time qPCR assay was used to quantify the bacterial cells present in different food matrices. The standard curve was developed, and the slopes, intercept, and R2 of linear regression curves were −3.10, 34.24, and 0.99, respectively. Conclusion: The considerably high occurrence of STEC in the study confirms the importance of foods of animal origin as a vehicle of infection to humans. In the present study, on comparing the overall occurrence of STEC, the highest percentage of occurrence was reported in beef kheema samples. The study shows the need for rigid food

  19. Equinoctial spread-F occurrence at low latitudes in different longitude sectors under moderate and high solar activity

    NASA Astrophysics Data System (ADS)

    Pietrella, M.; Pezzopane, M.; Fagundes, P. R.; de Jesus, R.; Supnithi, P.; Klinngam, S.; Ezquer, R. G.; Cabrera, M. A.

    2017-11-01

    A comparative study aimed to investigate the equatorial and low-latitude spread-F occurrences for moderate solar activity (MSA) and high solar activity (HSA), was carried out considering concurrent observations made in some ionospheric stations, which identify three separate longitudinal sectors: Chiang Mai (CGM; 18.8° N, 98.9° E, mag. Lat. 13.2° N) and Chumphon (CPN; 10.7° N, 99.4° E, mag. Lat. 3.2° N), Thailand; Palmas (PAL; 10.2° S, 311.8° E, mag. Lat. 0.9° S) and São José dos Campos (SJC; 23.2° S, 314.1° E, mag. Lat. 14.0° S), Brazil; Tucumán (TUC; 26.9° S, 294.6° E, mag. Lat. 16.8° S), Argentina. Spread-F phenomena recorded during the equinoctial months of September and October 2010, March and April 2011, for MSA, March and April 2014, September and October 2014, for HSA, were classified in two different modes: range spread-F (RSF) and frequency spread-F (FSF). The satellite trace (ST) occurrence was also investigated as possible precursor of spread-F events. When comparing the results of equatorial (CPN and PAL) and low-latitude (CGM, SJC, and TUC) stations, some common features independently of the solar activity emerge: (1) a prevalence of RSF signatures is observed in the time interval 20:00-03:00 LT, while FSF occurrences prevail in the time interval 03:00-06:00 LT; (2) STs are confirmed to be a possible precursor of RSF occurrences. For HSA, at equatorial latitudes, spread-F occurrences in the Thai sector (CPN) are higher than those observed in the Brazilian sector (PAL). When comparing the results of low-latitude stations of CGM, SJC, and TUC some unusual aspects characterizing the morphology of spread-F occurrences emerge: (1) contrary to the Thai and Argentine sectors, in the Brazilian sector (SJC), RSF and FSF appearances in September, for HSA, are observed with relatively long persistence times between about 03:00-06:00 LT and 01:00-03:00 LT respectively, while balanced RSF and FSF occurrences with short persistence times are

  20. CO-OCCURRENCE OF OZONE AND ACIDIC CLOUD WATER IN HIGH-ELEVATION FORESTS

    EPA Science Inventory

    A chemical climatology for high-elevation forests was estimated from ozone and cloudwater acidity data collected in the eastern United States. esides frequent ozone-only and pH-only single-pollutant episodes, both simultaneous and sequential co-occurrence of ozone and acidic clou...

  1. Bisphenol Analogues Other Than BPA: Environmental Occurrence, Human Exposure, and Toxicity-A Review.

    PubMed

    Chen, Da; Kannan, Kurunthachalam; Tan, Hongli; Zheng, Zhengui; Feng, Yong-Lai; Wu, Yan; Widelka, Margaret

    2016-06-07

    Numerous studies have investigated the environmental occurrence, human exposure, and toxicity of bisphenol A (BPA). Following stringent regulations on the production and usage of BPA, several bisphenol analogues have been produced as a replacement for BPA in various applications. The present review outlines the current state of knowledge on the occurrence of bisphenol analogues (other than BPA) in the environment, consumer products and foodstuffs, human exposure and biomonitoring, and toxicity. Whereas BPA was still the major bisphenol analogue found in most environmental monitoring studies, BPF and BPS were also frequently detected. Elevated concentrations of BPAF, BPF, and BPS (i.e., similar to or greater than that of BPA) have been reported in the abiotic environment and human urine from some regions. Many analogues exhibit endocrine disrupting effects, cytotoxicity, genotoxicity, reproductive toxicity, dioxin-like effects, and neurotoxicity in laboratory studies. BPAF, BPB, BPF, and BPS have been shown to exhibit estrogenic and/or antiandrogenic activities similar to or even greater than that of BPA. Knowledge gaps and research needs have been identified, which include the elucidation of environmental occurrences, persistence, and fate of bisphenol analogues (other than BPA), sources and pathways for human exposure, effects on reproductive systems and the mammary gland, mechanisms of toxicity from coexposure to multiple analogues, metabolic pathways and products, and the impact of metabolic modification on toxicity.

  2. Large-scale Circulation Control of the Occurrence of Low-level Turbulence at Hong Kong International Airport

    NASA Astrophysics Data System (ADS)

    Leung, Marco Y. T.; Zhou, Wen; Shun, Chi-Ming; Chan, Pak-Wai

    2018-04-01

    This study identifies the atmospheric circulation features that are favorable for the occurrence of low-level turbulence at Hong Kong International Airport [below 1600 feet (around 500 m)]. By using LIDAR data at the airport, turbulence and nonturbulence cases are selected. It is found that the occurrence of turbulence is significantly related to the strength of the southerly wind at 850 hPa over the South China coast. On the other hand, the east-west wind at this height demonstrates a weak relation to the occurrence. This suggests that turbulence is generated by flow passing Lantau Island from the south. The southerly wind also transports moisture from the South China Sea to Hong Kong, reducing local stability. This is favorable for the development of strong turbulence. It is also noted that the strong southerly wind during the occurrence of low-level turbulence is contributed by an anomalous zonal gradient of geopotential in the lower troposphere over the South China Sea. This gradient is caused by the combination of variations at different timescales. These are the passage of synoptic extratropical cyclones and anticyclones and the intraseasonal variation in the western North Pacific subtropical high. The seasonal variation in geopotential east of the Tibetan Plateau leads to a seasonal change in meridional wind, by which the frequency of low-level turbulence is maximized in spring and minimized in autumn.

  3. An optimally evolved connective ratio of neural networks that maximizes the occurrence of synchronized bursting behavior

    PubMed Central

    2012-01-01

    Background Synchronized bursting activity (SBA) is a remarkable dynamical behavior in both ex vivo and in vivo neural networks. Investigations of the underlying structural characteristics associated with SBA are crucial to understanding the system-level regulatory mechanism of neural network behaviors. Results In this study, artificial pulsed neural networks were established using spike response models to capture fundamental dynamics of large scale ex vivo cortical networks. Network simulations with synaptic parameter perturbations showed the following two findings. (i) In a network with an excitatory ratio (ER) of 80-90%, its connective ratio (CR) was within a range of 10-30% when the occurrence of SBA reached the highest expectation. This result was consistent with the experimental observation in ex vivo neuronal networks, which were reported to possess a matured inhibitory synaptic ratio of 10-20% and a CR of 10-30%. (ii) No SBA occurred when a network does not contain any all-positive-interaction feedback loop (APFL) motif. In a neural network containing APFLs, the number of APFLs presented an optimal range corresponding to the maximal occurrence of SBA, which was very similar to the optimal CR. Conclusions In a neural network, the evolutionarily selected CR (10-30%) optimizes the occurrence of SBA, and APFL serves a pivotal network motif required to maximize the occurrence of SBA. PMID:22462685

  4. Gender differences in co-occurrence of depressive and anger symptoms among adolescents in five Nordic countries.

    PubMed

    Asgeirsdottir, Bryndis Bjork; Sigfusdottir, Inga Dora

    2015-03-01

    The aim of this study was to carry out a comparative examination on gender differences in depressive and anger symptoms and their co-occurrence, using comparative self-report survey data from 16-19-year-old students in five Nordic countries. In total, 8038 adolescents participated in the study, 4183 females (52%) and 3855 males (48%) with an average age of 17.1 years. Analysis of Covariance (ANCOVA) was used to test for gender differences in symptoms for the sample as a whole and also for each country. Furthermore, partial bivariate correlation was carried out and followed up by ANCOVA to test for gender differences in the co-occurrence of depressive and anger symptoms in the five countries. The results indicated that, on average, adolescent females reported higher levels of depressive symptoms than males in all the countries under study and higher levels of anger symptoms in four out of five countries. The relationship between depressive and anger symptoms turned out to be stronger for females than males for all the countries under study, demonstrating higher co-occurrence of depressive and anger symptoms on average among females than males. The findings underline the need for attending to both depressive and anger symptoms among adolescents when designing mental health interventions and treatments as co-occurrence of both types of symptoms is common, particularly among females. © 2014 the Nordic Societies of Public Health.

  5. Contrasting occurrence of Chromobacterium violaceum in tropical drinking water springs of Uganda.

    PubMed

    Byamukama, Denis; Farnleitner, Andreas H; Kansiime, Frank; Manafi, Mohamad; Burtscher, Martina; Mach, Robert L

    2005-09-01

    Occurrence of Chromobacterium violaceum in six protected drinking water springs in Uganda was investigated. C. violaceum showed a contrasting occurrence, which was independent of human impact as assessed by faecal pollution indicators. It was isolated from two springs (S1 and S2) that were located close to each other (3 km) but not in the rest. In S1 C. violaceum was continuously detected, in concentrations ranging from 6 to 270 cfu 100 ml(-1), while in S2 it was detected on only one sampling occasion. C. violaceum was never detected in the investigated upper soil layers (down to 15 cm) in the immediate surroundings (50 m radius) of the springs, despite continued isolation of faecal indicators. The results of the study indicate that C. violaceum may not be ubiquitous in spring water, but could occur in significant numbers in particular potable groundwaters as an autochthonous member.

  6. Consumer exposures to anthocyanins from colour additives, colouring foodstuffs and from natural occurrence in foods.

    PubMed

    Tennant, David R; Klingenberg, Andreas

    2016-06-01

    Anthocyanins are responsible for the red/blue colour of grapes, currants, and other fruits and vegetables. They may also be extracted for use as colour additives (E163) or concentrated for use as colouring foods. Consumer exposures have been assessed using data on natural occurrence, use levels and frequencies from food manufacturers and European food consumption data. Intakes from natural occurrence can be up to 4 mg kg bw(-1) day(-1) at the mean and up to 17 mg kg bw(-1) day(-1) for children who are high level consumers of red/black berries and small fruits. High-level intakes for children from food colour and colouring food applications lie in the range 0.3-6.3 mg kg bw(-1) day(-1) and for adults at 0.6-2.8 mg kg bw(-1) day(-1). Exposures from food colour use and colouring foods separately or combined are therefore lower than those from natural occurrence in foods.

  7. Bone cancer occurrence among beagles given 239Pu as young adults.

    PubMed

    Lloyd, R D; Taylor, G N; Angus, W; Bruenger, F W; Miller, S C

    1993-01-01

    The occurrence of skeletal malignancies has been documented among 234 young adult beagles given single intravenous injections of monomeric 239Pu citrate. Occurrence has also been documented among 132 comparable control group animals surviving the minimum latent time period of 2.79 y for radiation-induced bone cancer, who were maintained for lifespan observation. Injected amounts ranged from about 0.02-106 kBq kg-1 body mass with factors of 2 or 3 between dose levels. There were 84 radiographically apparent bone tumors in 76 plutonium-injected dogs and one tumor in a control group dog. Most of these were osteosarcomas except for seven chondrosarcomas, one liposarcoma, and one plasma cell myeloma of bone. The relationship between percent of dogs at any dose level with bone malignancy and average skeletal dose at the presumed time of tumor initiation of 1 y before death appeared to be linear below about 1.3 Gy average skeletal dose. The observed data can be approximated by the expression A = 0.76 + 75 D, where A = percent of dogs with bone cancer at any dose level, D = average skeletal dose in Gy (for doses up to 1.3 Gy) at tumor initiation, and 0.76 represents the percent tumor response in the control animals not given plutonium. Similar analysis of our corresponding data for beagles given 226Ra, excluding the two highest dose levels (approximately 100% occurrence), yielded the expression A = 0.76 + 4.7 D, where D = the average skeletal dose in Gy (for doses up to 20 Gy) at 1 y before death. The ratio of coefficients indicates the effectiveness for bone cancer induction of 239Pu relative to 226Ra, or [(75 +/- 22.5)(4.7 +/- 0.47)-1] = 16 +/- 5 for a single, brief intake of either nuclide into blood.

  8. Estimating species richness and accumulation by modeling species occurrence and detectability

    USGS Publications Warehouse

    Dorazio, R.M.; Royle, J. Andrew; Soderstrom, B.; Glimskarc, A.

    2006-01-01

    A statistical model is developed for estimating species richness and accumulation by formulating these community-level attributes as functions of model-based estimators of species occurrence while accounting for imperfect detection of individual species. The model requires a sampling protocol wherein repeated observations are made at a collection of sample locations selected to be representative of the community. This temporal replication provides the data needed to resolve the ambiguity between species absence and nondetection when species are unobserved at sample locations. Estimates of species richness and accumulation are computed for two communities, an avian community and a butterfly community. Our model-based estimates suggest that detection failures in many bird species were attributed to low rates of occurrence, as opposed to simply low rates of detection. We estimate that the avian community contains a substantial number of uncommon species and that species richness greatly exceeds the number of species actually observed in the sample. In fact, predictions of species accumulation suggest that even doubling the number of sample locations would not have revealed all of the species in the community. In contrast, our analysis of the butterfly community suggests that many species are relatively common and that the estimated richness of species in the community is nearly equal to the number of species actually detected in the sample. Our predictions of species accumulation suggest that the number of sample locations actually used in the butterfly survey could have been cut in half and the asymptotic richness of species still would have been attained. Our approach of developing occurrence-based summaries of communities while allowing for imperfect detection of species is broadly applicable and should prove useful in the design and analysis of surveys of biodiversity.

  9. Risk Factors Analysis for Occurrence of Asymptomatic Bacteriuria After Endourological Procedures

    PubMed Central

    Junuzovic, Dzelaludin; Hasanbegovic, Munira

    2014-01-01

    Introduction: Endourological procedures are performed according to the principles of aseptic techniques, jet still in certain number of patients urinary tract infections may occur. Considering the risk of urinary tract infection, there is no unique opinion about the prophylactic use of antibiotics in endourological procedures. Goal: The objective of this study was to determine the connection between endourological procedures and occurrence of urinary infections and to analyze the risk factors of urinary infection for patients who were hospitalized at the Urology Clinic of the Clinical Center University of Sarajevo CCUS. Materials and Methods: The research was conducted as a prospective study on a sample of 208 patients of both genders, who were hospitalized at the Urology Clinic of the CCUS and to whom some endourological procedure was indicated for diagnostic or therapeutic purposes. We analyzed data from patient’s histories of illness, laboratory tests taken at admission and after endourological procedures, also surgical programs for endoscopic procedures. All patients were clinically examined prior to endoscopic procedures while after the treatment attention was focused to the symptoms of urinary tract infections. Results: Statistical analysis of the tested patients indicates that there is no significant difference in the presence of postoperative, compared to preoperative bacteriuria, which implies that the endourological procedures are safe procedures in terms of urinary tract infections. Preoperatively, the most commonly isolated bacteria was Escherichia coli (30.9%) and postoperatively, Enterococcus faecalis (25%). Statistically significant effect on the occurrence of postoperative bacteriuria has preoperative bacteriuria, duration of postoperative catheterization, and duration of hospitalization. Conclusion: In everyday urological practice, it is very important to identify and control risk factors for the development of urinary infection after

  10. Modelling the occurrence and severity of enoxaparin-induced bleeding and bruising events

    PubMed Central

    Barras, Michael A; Duffull, Stephen B; Atherton, John J; Green, Bruce

    2009-01-01

    AIMS To develop a population pharmacokinetic–pharmacodynamic model to describe the occurrence and severity of bleeding or bruising as a function of enoxaparin exposure. METHODS Data were obtained from a randomized controlled trial (n = 118) that compared conventional dosing of enoxaparin (product label) with an individualized dosing regimen. Anti-Xa concentrations were sampled using a sparse design and the size, location and type of bruising and bleeding event, during enoxaparin therapy, were collected daily. A population pharmacokinetic–pharmacodynamic analysis was performed using nonlinear mixed effects techniques. The final model was used to explore how the probability of events in patients with obesity and/or renal impairment varied under differing dosing strategies. RESULTS Three hundred and forty-nine anti-Xa concentrations were available for analysis. A two-compartment first-order absorption and elimination model best fit the data, with lean body weight describing between-subject variability in clearance and central volume of distribution. A three-category proportional-odds model described the occurrence and severity of events as a function of both cumulative enoxaparin AUC (cAUC) and subject age. Simulations showed that individualized dosing decreased the probability of a bleeding or major bruising event when compared with conventional dosing, which was most noticeable in subjects with obesity and renal impairment. CONCLUSIONS The occurrence and severity of a bleeding or major bruising event to enoxaparin, administered for the treatment of a thromboembolic disease, can be described as a function of both cAUC and subject age. Individualized dosing of enoxaparin will reduce the probability of an event. PMID:19916994

  11. Relationship between Food Habits and Tooth Erosion Occurrence in Malaysian University Students

    PubMed Central

    Zahara, Abdul Manaf; Mei Tee, Lee; Nor Hazirah, Muhammad Ali; Selvamary, Samynathan; Ying Phor, Jie; Noor Hasnani, Ismail; Bibiana Hui Ying, Yong; Wei Seng, Yeo; Nurul Asyikin, Yahya

    2012-01-01

    Background: Tooth erosion is a growing dental problem; however, the role of diet in the aetiology of tooth erosion is unclear. A cross-sectional study was conducted to determine the association between tooth erosion occurrence and the consumption of acidic foods and drinks among undergraduate university students. Methods: A total of 150 undergraduate students (33 males and 117 females) aged 19 to 24 years at Universiti Kebangsaan Malaysia participated in this study. The Basic Erosive Wear Examination was used to assess the occurrence of tooth erosion. Information regarding dental hygiene practices, usual dietary habits, and consumption of acidic foods and drinks was obtained through a structured questionnaire. Results: In all, 68% of subjects had tooth erosion. Subjects who reported having received information about healthy eating were less likely to have tooth erosion (χ2 [1, N = 150] = 7.328, P = 0.007). The frequencies of milk (OR = 0.29, 95% CI = 0.13–0.67) and tea/coffee (adjusted OR = 0.42, 95% CI = 0.19–0.95) consumption were negatively associated with tooth erosion. Dental hygiene practice, the frequency and amount of acidic food and drink intake, and body mass index classification were not significantly associated with the risk of tooth erosion (P > 0.05). Conclusion: A high prevalence of tooth erosion was observed among this group of students. Preventive measures, such as dietary advice and increased consumption of milk at a younger age, may reduce the occurrence of tooth erosion among this age group. PMID:22973138

  12. Regional variation in fire weather controls the reported occurrence of Scottish wildfires

    PubMed Central

    Legg, Colin J.

    2016-01-01

    Fire is widely used as a traditional habitat management tool in Scotland, but wildfires pose a significant and growing threat. The financial costs of fighting wildfires are significant and severe wildfires can have substantial environmental impacts. Due to the intermittent occurrence of severe fire seasons, Scotland, and the UK as a whole, remain somewhat unprepared. Scotland currently lacks any form of Fire Danger Rating system that could inform managers and the Fire and Rescue Services (FRS) of periods when there is a risk of increased of fire activity. We aimed evaluate the potential to use outputs from the Canadian Fire Weather Index system (FWI system) to forecast periods of increased fire risk and the potential for ignitions to turn into large wildfires. We collated four and a half years of wildfire data from the Scottish FRS and examined patterns in wildfire occurrence within different regions, seasons, between urban and rural locations and according to FWI system outputs. We used a variety of techniques, including Mahalanobis distances, percentile analysis and Thiel-Sen regression, to scope the best performing FWI system codes and indices. Logistic regression showed significant differences in fire activity between regions, seasons and between urban and rural locations. The Fine Fuel Moisture Code and the Initial Spread Index did a tolerable job of modelling the probability of fire occurrence but further research on fuel moisture dynamics may provide substantial improvements. Overall our results suggest it would be prudent to ready resources and avoid managed burning when FFMC > 75 and/or ISI > 2. PMID:27833814

  13. Regional variation in fire weather controls the reported occurrence of Scottish wildfires.

    PubMed

    Davies, G Matt; Legg, Colin J

    2016-01-01

    Fire is widely used as a traditional habitat management tool in Scotland, but wildfires pose a significant and growing threat. The financial costs of fighting wildfires are significant and severe wildfires can have substantial environmental impacts. Due to the intermittent occurrence of severe fire seasons, Scotland, and the UK as a whole, remain somewhat unprepared. Scotland currently lacks any form of Fire Danger Rating system that could inform managers and the Fire and Rescue Services (FRS) of periods when there is a risk of increased of fire activity. We aimed evaluate the potential to use outputs from the Canadian Fire Weather Index system (FWI system) to forecast periods of increased fire risk and the potential for ignitions to turn into large wildfires. We collated four and a half years of wildfire data from the Scottish FRS and examined patterns in wildfire occurrence within different regions, seasons, between urban and rural locations and according to FWI system outputs. We used a variety of techniques, including Mahalanobis distances, percentile analysis and Thiel-Sen regression, to scope the best performing FWI system codes and indices. Logistic regression showed significant differences in fire activity between regions, seasons and between urban and rural locations. The Fine Fuel Moisture Code and the Initial Spread Index did a tolerable job of modelling the probability of fire occurrence but further research on fuel moisture dynamics may provide substantial improvements. Overall our results suggest it would be prudent to ready resources and avoid managed burning when FFMC > 75 and/or ISI > 2.

  14. OCCURRENCE OF HIGH-SPEED SOLAR WIND STREAMS OVER THE GRAND MODERN MAXIMUM

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mursula, K.; Holappa, L.; Lukianova, R., E-mail: kalevi.mursula@oulu.fi

    2015-03-01

    In the declining phase of the solar cycle (SC), when the new-polarity fields of the solar poles are strengthened by the transport of same-signed magnetic flux from lower latitudes, the polar coronal holes expand and form non-axisymmetric extensions toward the solar equator. These extensions enhance the occurrence of high-speed solar wind (SW) streams (HSS) and related co-rotating interaction regions in the low-latitude heliosphere, and cause moderate, recurrent geomagnetic activity (GA) in the near-Earth space. Here, using a novel definition of GA at high (polar cap) latitudes and the longest record of magnetic observations at a polar cap station, we calculatemore » the annually averaged SW speeds as proxies for the effective annual occurrence of HSS over the whole Grand Modern Maximum (GMM) from 1920s onward. We find that a period of high annual speeds (frequent occurrence of HSS) occurs in the declining phase of each of SCs 16-23. For most cycles the HSS activity clearly reaches a maximum in one year, suggesting that typically only one strong activation leading to a coronal hole extension is responsible for the HSS maximum. We find that the most persistent HSS activity occurred in the declining phase of SC 18. This suggests that cycle 19, which marks the sunspot maximum period of the GMM, was preceded by exceptionally strong polar fields during the previous sunspot minimum. This gives interesting support for the validity of solar dynamo theory during this dramatic period of solar magnetism.« less

  15. MULTIPLICITY OF NOVA ENVELOPE SOLUTIONS AND OCCURRENCE OF OPTICALLY THICK WINDS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kato, Mariko; Hachisu, Izumi

    2009-07-10

    We revisit the occurrence condition of optically thick winds reported by Kato in 1985 and Kato and Hachisu in 1989 who mathematically examined nova envelope solutions with an old opacity and found that optically thick winds are accelerated only in massive white dwarfs (WDs) of {approx}>0.9 M{sub sun}. With the OPAL opacity we find that the optically thick wind occurs for {approx}>0.6 M{sub sun} WDs and that the occurrence of winds depends not only on the WD mass but also on the ignition mass. When the ignition mass is larger than a critical value, winds are suppressed by a density-inversionmore » layer. Such a static solution can be realized in WDs of mass {approx}0.6-0.7 M{sub sun}. We propose that sequences consisting only of static solutions correspond to slow evolutions in symbiotic novae like PU Vul because PU Vul shows no indication of strong winds in a long-lasted flat peak followed by a very slow decline in its light curve.« less

  16. Is there a link between food and intestinal microbes and the occurrence of Crohn's disease and ulcerative colitis?

    PubMed

    Asakura, Hitoshi; Suzuki, Kenji; Kitahora, Tetsuji; Morizane, Toshio

    2008-12-01

    The pathogenesis of Crohn's disease (CD) and ulcerative colitis (UC) is not fully understood. The interaction between intestinal environmental factors of food and intestinal microbes and the immunological system of hosts seems to be an important aspect. We have reviewed the relationship of the daily consumption of dietary animal meat and fats, dairy products, sugar, and other factors that may be linked to the occurrence of CD and UC from the literature and Japanese epidemiological data. In the present study, we reviewed the association between food and intestinal microbes and other factors contributing to the occurence of inflammatory bowel disease (IBD) from epidemiological data and case-control studies of IBD in the literature that appeared on Medline, and assessed the reports of intestinal microbes involved in the occurrence of IBD. We found several papers describing the positive association of animal meat and sweets and sugar with the occurrence of CD and UC. An analysis of Japanese epidemiological data suggested that the registered number of patients with CD or UC started to increase more than 20 years after an increased daily consumption of dietary animal meat and fats, and milk and dairy products, and after a decreased consumption of rice. Many studies implied a positive role of intestinal microbes in the occurrence of IBD. Intestinal environmental factors, such as Westernized food and intestinal microbes, seem to be involved in the increased occurrence of IBD.

  17. OCCURRENCE AND ORIENTATION OF PARALICHTHID FLOUNDERS (BOTHIDAE: PARALICHTYS) ON AN INTERTIDAL BEACH

    EPA Science Inventory

    Middaugh, Douglas P. and Charles L. McKenney, Jr. 2003. Occurrence and Orientation of Flounders (Bothidae: Paralichthys) on an Intertidal Beach. J. North Carol. Acad. Sci. 119(4):157-171. (ERL,GB 1172).

    The intertidal movement and burying pattern of paralichthid flounders...

  18. Occurrence and Mammalian Cell Toxicity of Iodinated Disinfection Byproducts in Drinking Water

    EPA Science Inventory

    An occurrence study was conducted to measure five iodo-acids (iodoacetic acid, bromoiodoacetic acid, (Z)-3-bromo-3-iodo-propenoic acid, (E)-3-bromo-3-iodo-propenoic acid, and (E)-2-iodo-3-methylbutenedioic acid) and two iodo-trihalomethanes (iodo-THMs), (dichloroiodomethane and b...

  19. Identification of divergent protein domains by combining HMM-HMM comparisons and co-occurrence detection.

    PubMed

    Ghouila, Amel; Florent, Isabelle; Guerfali, Fatma Zahra; Terrapon, Nicolas; Laouini, Dhafer; Yahia, Sadok Ben; Gascuel, Olivier; Bréhélin, Laurent

    2014-01-01

    Identification of protein domains is a key step for understanding protein function. Hidden Markov Models (HMMs) have proved to be a powerful tool for this task. The Pfam database notably provides a large collection of HMMs which are widely used for the annotation of proteins in sequenced organisms. This is done via sequence/HMM comparisons. However, this approach may lack sensitivity when searching for domains in divergent species. Recently, methods for HMM/HMM comparisons have been proposed and proved to be more sensitive than sequence/HMM approaches in certain cases. However, these approaches are usually not used for protein domain discovery at a genome scale, and the benefit that could be expected from their utilization for this problem has not been investigated. Using proteins of P. falciparum and L. major as examples, we investigate the extent to which HMM/HMM comparisons can identify new domain occurrences not already identified by sequence/HMM approaches. We show that although HMM/HMM comparisons are much more sensitive than sequence/HMM comparisons, they are not sufficiently accurate to be used as a standalone complement of sequence/HMM approaches at the genome scale. Hence, we propose to use domain co-occurrence--the general domain tendency to preferentially appear along with some favorite domains in the proteins--to improve the accuracy of the approach. We show that the combination of HMM/HMM comparisons and co-occurrence domain detection boosts protein annotations. At an estimated False Discovery Rate of 5%, it revealed 901 and 1098 new domains in Plasmodium and Leishmania proteins, respectively. Manual inspection of part of these predictions shows that it contains several domain families that were missing in the two organisms. All new domain occurrences have been integrated in the EuPathDomains database, along with the GO annotations that can be deduced.

  20. Identification of Divergent Protein Domains by Combining HMM-HMM Comparisons and Co-Occurrence Detection

    PubMed Central

    Ghouila, Amel; Florent, Isabelle; Guerfali, Fatma Zahra; Terrapon, Nicolas; Laouini, Dhafer; Yahia, Sadok Ben; Gascuel, Olivier; Bréhélin, Laurent

    2014-01-01

    Identification of protein domains is a key step for understanding protein function. Hidden Markov Models (HMMs) have proved to be a powerful tool for this task. The Pfam database notably provides a large collection of HMMs which are widely used for the annotation of proteins in sequenced organisms. This is done via sequence/HMM comparisons. However, this approach may lack sensitivity when searching for domains in divergent species. Recently, methods for HMM/HMM comparisons have been proposed and proved to be more sensitive than sequence/HMM approaches in certain cases. However, these approaches are usually not used for protein domain discovery at a genome scale, and the benefit that could be expected from their utilization for this problem has not been investigated. Using proteins of P. falciparum and L. major as examples, we investigate the extent to which HMM/HMM comparisons can identify new domain occurrences not already identified by sequence/HMM approaches. We show that although HMM/HMM comparisons are much more sensitive than sequence/HMM comparisons, they are not sufficiently accurate to be used as a standalone complement of sequence/HMM approaches at the genome scale. Hence, we propose to use domain co-occurrence — the general domain tendency to preferentially appear along with some favorite domains in the proteins — to improve the accuracy of the approach. We show that the combination of HMM/HMM comparisons and co-occurrence domain detection boosts protein annotations. At an estimated False Discovery Rate of 5%, it revealed 901 and 1098 new domains in Plasmodium and Leishmania proteins, respectively. Manual inspection of part of these predictions shows that it contains several domain families that were missing in the two organisms. All new domain occurrences have been integrated in the EuPathDomains database, along with the GO annotations that can be deduced. PMID:24901648

  1. Identification of clinical and paraclinical findings predictive for headache occurrence during spontaneous subarachnoid hemorrhage.

    PubMed

    Ljubisavljevic, Srdjan; Milosevic, Vuk; Stojanov, Aleksandar; Ljubisavljevic, Marina; Dunjic, Olivera; Zivkovic, Miroslava

    2017-07-01

    Headache is recognized as the main but unwarranted symptom of subarachnoid hemorrhage (SAH). There are no enough findings identified as predictive for headache occurrence in SAH. We evaluated the clinical and paraclinical factors predictive for headache occurrence in SAH. We retrospectively analyzed medical records of 431 consecutive non traumatic SAH patients (264 females and 167 males), ages from 19 to 91 years, presenting with headache (70.3%) and without headache (29.7%) during period of 11years. Among all tested parameters, as negative predictors for headache occurrence were recognized: patients' ages (OR 0.97 [95%CI: 0.96-0.99], p=0.025), persistence of coagulation abnormality (OR 0.23 [95%CI: 0.08-0.67], p=0.006), atrial fibrilation (OR 0.23 [95%CI: 0.09-0.59], p=0.002), chronic renal failure (OR 0.26 [95%CI: 0.09-0.76], p=0.014) and more diseases (OR 0.11 [95%CI: 0.04-0.32], p<0.0001), as higher clinical score (OR 0.94 [95%CI: 0.90-0.99], p=0.018) including positive neurological findings (OR 0.34 [95%CI: 0.21-0.55], p<0.001) and loss of consciousness (OR 0.22 [95%CI: 0.12-0.39], p<0.001) at the SAH onset, while the complaint of neck stiffness was identified as its positive predictor (OR 1.93 [95%CI: 1.19-3.10], p=0.007). Although diagnosis based solely on clinical presentation is not reliable and speculative, our findings could provide physicians with evidence to consider SAH not only in conditions of its headache occurrence but also in those with headache absence. Copyright © 2017 Elsevier B.V. All rights reserved.

  2. Occurrence of pesticides in five rivers of the Mississippi Embayment Study Unit, 1996-98

    USGS Publications Warehouse

    Coupe, Richard H.

    2000-01-01

    The occurrence and temporal distribution of more than 80 pesticides and pesticide metabolites were determined in five rivers of the Mississippi Embayment National Water-Quality Assessment study unit from February 1996 through January 1998. More than 230 samples were collected and analyzed during the 2-year study. The five rivers sampled included three rivers with small, primarily agricultural watersheds; one river with a small urban watershed in Memphis, Tennessee; and one large river with mixed land use (row-crop agriculture, pasture, forest, and urban). Pesticides, usually herbicides, were frequently detected in water samples from every river. Insecticides were frequently detected (chlorpyrifos and diazinon in all samples) only in the river that drains the urban watershed. The occurrence of pesticides in surface water varied among the agricultural watersheds as well as between the agricultural and urban watersheds. The pesticides detected in the rivers that drain the agricultural watersheds were related to the major crop types cultivated in the watershed?corn is mostly grown in the northern part of the study unit, whereas cotton and rice are mostly grown in the southern part. The occurrence of pesticides in the Yazoo River, which drains the mixed land-use watershed, was similar to pesticide occurrence in the rivers that drain smaller agricultural watersheds, although concentrations were lower in the Yazoo River. Likewise, simazine, which was detected in all urban stream samples, was also detected in all Yazoo River samples, but in lower concentrations. The aquatic-life criteria for diazinon and chlorpyrifos was exceeded in 24 of 25 and 12 of 25 urban river samples, respectively, but only once or twice in agricultural and mixed-use watershed samples. Atrazine exceeded the aquatic-life criterion in about 20 percent of the samples from each river, particularly in the spring following pesticide application.

  3. The value of Doppler ultrasound in predicting delayed graft function occurrence after kidney transplantation.

    PubMed

    Mocny, Grzegorz; Bachul, Piotr; Chang, Ea-Sle; Kulig, Piotr

    The aim of this study was to assess the predictive value of blood flow velocity and vascular resistance measured by Doppler ultrasound in terms of pulsatility index (PI) and resistive index (RI) respectively, in the occurrence of delayed graft function (DGF) after kidney transplantation. This prospective study enrolled kidney transplant recipients operated from January 2005 to April 2009 in the 1st Department of General, Oncological and Gastroenterological Surgery, Jagiellonian University Medical College, Kraków, Poland. The medical records of 53 kidney transplant recipients from deceased donors were reviewed. PI and RI values of the graft arcuate artery were calculated immediately after blood flow restoration and on the 1st, 2nd, 4th and 8th post-operative day. DGF was observed in 20 patients (37.7%), while 33 patients (62.3%) had immediate restoration of the kidney function. The mean intraoperative values of RI and PI from patients with DGF were significantly higher in comparison to patients without DGF (0.9 vs. 0.74, p <0.001; 1.76 vs. 1.54, p = 0.019, respectively). Post-operatively, the RI and PI values remained stable and significantly higher in DGF group. The highest sensitivity of RI to predict DGF occurrence was observed intraoperatively and on the first postoperative day, with values of 77.8% and 72.2%, respectively. The risk of DGF occurrence with intraoperative RI value ≥0.9 increased by 13-fold, and with intraoperative PI value ≥1.9 by 12-fold. This increase was even more prominent during the first post-operative day with RI value ≥0.9 or PI value ≥1.9 with 19-fold increase in the risk of DGF occurrence. According to our study, the utilization of Doppler ultrasound with measurement of hemodynamic parameters (PI, RI), play a crucial role in predicting the outcomes of kidney transplantation.

  4. Idaho National Laboratory Quarterly Occurrence Analysis for the 1st Quarter FY2017

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Mitchell, Lisbeth Ann

    This report is published quarterly by the Idaho National Laboratory (INL) Quality and Performance Management Organization. The Department of Energy (DOE) Occurrence Reporting and Processing System (ORPS), as prescribed in DOE Order 232.2, “Occurrence Reporting and Processing of Operations Information,” requires a quarterly analysis of events, both reportable and not reportable, for the previous 12 months. This report is the analysis of 82 reportable events (13 from the 1st quarter (Qtr) of fiscal year (FY) 2017 and 68 from the prior three reporting quarters), as well as 31 other issue reports (including events found to be not reportable and Significantmore » Category A and B conditions) identified at INL during the past 12 months (seven from this quarter and 24 from the prior three quarters).« less

  5. Temperature factors effect on occurrence of stress corrosion cracking of main gas pipeline

    NASA Astrophysics Data System (ADS)

    Nazarova, M. N.; Akhmetov, R. R.; Krainov, S. A.

    2017-10-01

    The purpose of the article is to analyze and compare the data in order to contribute to the formation of an objective opinion on the issue of the growth of stress corrosion defects of the main gas pipeline. According to available data, a histogram of the dependence of defects due to stress corrosion on the distance from the compressor station was constructed, and graphs of the dependence of the accident density due to stress corrosion in the winter and summer were also plotted. Data on activation energy were collected and analyzed in which occurrence of stress corrosion is most likely constructed, a plot of activation energy versus temperature is plotted, and the process of occurrence of stress corrosion by the example of two different grades of steels under the action of different temperatures was analyzed.

  6. Co-occurrence Networks Among Bacteria and Microbial Eukaryotes of Lake Baikal During a Spring Phytoplankton Bloom.

    PubMed

    Mikhailov, Ivan S; Zakharova, Yulia R; Bukin, Yuri S; Galachyants, Yuri P; Petrova, Darya P; Sakirko, Maria V; Likhoshway, Yelena V

    2018-06-07

    The pelagic zone of Lake Baikal is an ecological niche where phytoplankton bloom causes increasing microbial abundance in spring which plays a key role in carbon turnover in the freshwater lake. Co-occurrence patterns revealed among different microbes can be applied to predict interactions between the microbes and environmental conditions in the ecosystem. We used 454 pyrosequencing of 16S rRNA and 18S rRNA genes to study bacterial and microbial eukaryotic communities and their co-occurrence patterns at the pelagic zone of Lake Baikal during a spring phytoplankton bloom. We found that microbes within one domain mostly correlated positively with each other and are highly interconnected. The highly connected taxa in co-occurrence networks were operational taxonomic units (OTUs) of Actinobacteria, Bacteroidetes, Alphaproteobacteria, and autotrophic and unclassified Eukaryota which might be analogous to microbial keystone taxa. Constrained correspondence analysis revealed the relationships of bacterial and microbial eukaryotic communities with geographical location.

  7. Maastrichtian sedimentation and palaeoenvironments of the Saratov Volga region

    NASA Astrophysics Data System (ADS)

    Iakovishina, Elena; Blinova, Irina; Kopaevich, Ludmila; Vishnevskaya, Valentina; Bordunov, Sergey

    2016-04-01

    The Saratov Volga region was a shallow-marine epicontinental basin North-Eastern shelf zone of the Tethys Ocean in the Maastrichtian. The basis for the modeling conditions of sedimentation was the detection mineral composition of rocks, as well as the contents of various chemical elements in rocks in three reference sections: Lower Bannovka, quarries "Bolshevik" and "Kommunar". Rocks of quarries "Bolshevik" and "Kommunar" characterized by quartz-calcite mineral association. The main rock-forming mineral is calcite, small amounts in rocks contain quartz. Other mineral composition characterized section Lower Bannovka. At the base of the section in the rock marked the presence of the opal. The source of silica are radiolarians. Favorable conditions for the existence of which is cold deep water enriched with SiO2. Above the section marked authigenic glauconite, which are confined to zones of skip in sedimentation.Further up begins to dominate the accumulation of calcite with rich bentic foraminifera. Clay minerals in rocks of the section Lower Bannovka presented montmorillonite and illite. The relationship of chemical elements and their alkali modules allow to detail the conditions of sedimentation. The ratio of Fe/Mn in them varies from 44 to 5729. Higher values are characteristic of glauconite sandstones. Up the section marked decrease in the Ti/Zr, indicating that the increase in the distance from the source area to the place of deposition. The similarity values of the ratio Ti/Zr samples indicates a community source area. Sedimentation Model revealed the impact of the PreUral strait connecting Tethys and Paleoarktic. Through the Strait of deep cold water saturated with SiO2, penetrated into the of the Saratov Volga region, were accumulated clay. The closing of the PreUral Strait changed the conditions of sedimentation, the associated fall in sea levels due to global cooling reflected in the crisis of radiolarians, increase in the number of glauconite. Subsequent warming and warm-water transgression caused dominance of carbonates. The work was supported by grants 15-05-04990, 15-05-04700 Russian Foundation for Basic Research and IGCP project 609.

  8. Associations Between the Level of Biosecurity and Occurrence of Dermanyssus gallinae and Salmonella spp. in Layer Farms.

    PubMed

    Sylejmani, Driton; Musliu, Arben; Ramadani, Naser; Sparagano, Olivier; Hamidi, Afrim

    2016-06-01

    Salmonella and the poultry red mite (Dermanyssus gallinae) remain very challenging diseases for the poultry industry worldwide because of the inefficiency of implementing and integrating eradication and control programs, which results in very high economic losses to the poultry industry. The aim of this study was to determine the association between biosecurity levels in layer farms and the occurrence of both D. gallinae and Salmonella spp., as well as the relationship between D. gallinae infestations on farms and Salmonella occurrence. For this purpose, 22 layer farms using the common battery cage housing system in different parts of Kosovo were randomly selected and analyzed for the presence of D. gallinae and Salmonella in samples, such as feces, water, feed, and dust. Two pooled samples of D. gallinae (2n = 100) were directly analyzed for the presence of Salmonella in the outer and inner parts of cuticula from D. gallinae. A chi-square test was used to determine the association between experience in poultry production, rearing, and level of different biosecurity elements in relation to the occurrence of D. gallinae and Salmonella. Dermanyssus gallinae was found on 15 farms, whereas Salmonella was found on eight of those 15 farms from different environmental samples and on one farm where D. gallinae was not found. In two pooled samples Salmonella was isolated directly from the inner part of the cuticula from D. gallinae, which represents the first direct isolation of Salmonella from D. gallinae mites. Association between the level of biosecurity and the occurrence of D. gallinae and Salmonella was strong. The study indicates that proper biosecurity measures should be in place to lower the occurrence of D. gallinae and Salmonella.

  9. At-risk depressive symptoms and alcohol use trajectories in adolescence: a person-centred analysis of co-occurrence.

    PubMed

    Willoughby, Teena; Fortner, Adrian

    2015-04-01

    Long-term longitudinal studies that examine whether there are distinct trajectories of at-risk depressive symptoms and alcohol use across the high school years (e.g., high co-occurrence) are rare in normative samples of adolescent boys and girls; yet, this assessment is of critical importance for developing effective prevention and intervention strategies. Moreover, the role of self-regulation and novelty-seeking behavior in differentiating among distinct subgroups of adolescents is not clear. To address these gaps, the present study sought to identify subgroups of adolescent boys and girls that indicated at-risk trajectories across the high school years for both depressive symptoms and alcohol use, and examined the role of delay of gratification and novelty seeking at baseline in differentiating among the subgroups. Canadian adolescents (N = 4,412; 49 % female) were surveyed at four time points (grades 9, 10, 11, and 12). Parallel process latent class growth analyses revealed four distinct subgroups for both boys and girls, encompassing high co-occurrence, depressive symptoms only, alcohol use only, and low co-occurrence. Across gender, delay of gratification at baseline differentiated among the four subgroups, with the High Co-Occurrence Group group scoring the lowest and the Low Co-Occurrence Group the highest. Lower novelty-seeking scores at baseline were associated more with being in the Depressive Symptoms Only Group relative to the other groups, particularly the Alcohol Use Only Group for boys. Thus, delay of gratification and novelty seeking may be useful in identifying youth at risk for co-occurring depressive symptoms and alcohol use trajectories, as well as at-risk trajectories for only one of these behaviors.

  10. Occurrence and fate of pharmaceutical products and by-products, from resource to drinking water.

    PubMed

    Mompelat, S; Le Bot, B; Thomas, O

    2009-07-01

    Among all emerging substances in water, pharmaceutical products (PPs) and residues are a lot of concern. These last two years, the number of studies has increased drastically, however much less for water resources and drinking water than for wastewater. This literature review based on recent works, deals with water resources (surface or groundwater), focusing on characteristics, occurrence and fate of numerous PPs studied, and drinking water including water quality. Through this review, it appears that the pharmaceutical risk must be considered even in drinking water where concentrations are very low. Moreover, there is a lack of research for by-products (metabolites and transformation products) characterization, occurrence and fate in all water types and especially in drinking water.

  11. Global occurrence of anti-infectives in contaminated surface waters: Impact of income inequality between countries.

    PubMed

    Segura, Pedro A; Takada, Hideshige; Correa, José A; El Saadi, Karim; Koike, Tatsuya; Onwona-Agyeman, Siaw; Ofosu-Anim, John; Sabi, Edward Benjamin; Wasonga, Oliver V; Mghalu, Joseph M; dos Santos Junior, Antonio Manuel; Newman, Brent; Weerts, Steven; Yargeau, Viviane

    2015-07-01

    The presence anti-infectives in environmental waters is of interest because of their potential role in the dissemination of anti-infective resistance in bacteria and other harmful effects on non-target species such as algae and shellfish. Since no information on global trends regarding the contamination caused by these bioactive substances is yet available, we decided to investigate the impact of income inequality between countries on the occurrence of anti-infectives in surface waters. In order to perform such study, we gathered concentration values reported in the peer-reviewed literature between 1998 and 2014 and built a database. To fill the gap of knowledge on occurrence of anti-infectives in African countries, we also collected 61 surface water samples from Ghana, Kenya, Mozambique and South Africa, and measured concentrations of 19 anti-infectives. A mixed one-way analysis of covariance (ANCOVA) model, followed by Turkey-Kramer post hoc tests was used to identify potential differences in anti-infective occurrence between countries grouped by income level (high, upper-middle and lower-middle and low income) according to the classification by the World Bank. Comparison of occurrence of anti-infectives according to income level revealed that concentrations of these substances in contaminated surface waters were significantly higher in low and lower-middle income countries (p=0.0001) but not in upper-middle income countries (p=0.0515) compared to high-income countries. We explained these results as the consequence of the absence of or limited sewage treatment performed in lower income countries. Furthermore, comparison of concentrations of low cost anti-infectives (sulfonamides and trimethoprim) and the more expensive macrolides between income groups suggest that the cost of these substances may have an impact on their environmental occurrence in lower income countries. Since wastewaters are the most important source of contamination of anti-infectives and other

  12. Correlation between vitiligo occurrence and clinical benefit in advanced melanoma patients treated with nivolumab: A multi-institutional retrospective study.

    PubMed

    Nakamura, Yasuhiro; Tanaka, Ryota; Asami, Yuri; Teramoto, Yukiko; Imamura, Taichi; Sato, Sayuri; Maruyama, Hiroshi; Fujisawa, Yasuhiro; Matsuya, Taisuke; Fujimoto, Manabu; Yamamoto, Akifumi

    2017-02-01

    Vitiligo is occasionally seen in melanoma patients. Although several studies indicate a correlation between vitiligo occurrence and clinical response in melanoma patients receiving immunotherapy, most studies have included heterogeneous patient and treatment settings. The aim of this study is to investigate the correlation between the occurrence of vitiligo and clinical benefit of nivolumab treatment in advanced melanoma patients. We retrospectively reviewed unresectable stage III or IV melanoma patients treated with nivolumab. Of 35 melanoma patients treated with nivolumab, 25.7% (9/35) developed vitiligo during treatment. The time from the start of nivolumab treatment to occurrence of vitiligo ranged 2-9 months (mean, 5.2). Of nine patients who developed vitiligo, two (22.2%) had a complete response to nivolumab and two (22.2%) had a partial response. The objective response rate was significantly higher in patients with vitiligo than in patients without vitiligo (4/9 [44.4%] vs 2/26 [7.7%]; P = 0.027). The mean time to vitiligo occurrence in patients achieving an objective response was significantly less than that in patients who showed no response (3.1 vs 6.8 months, P = 0.004). Vitiligo occurrence was significantly associated with prolonged progression-free and overall survival (hazard ratio, 0.24 and 0.16; 95% confidence interval, 0.11-0.55 and 0.03-0.79; P = 0.005, and 0.047, respectively). At the 20-week landmark analysis, however, vitiligo was not associated with a statistically significant overall survival benefit (P = 0.28). The occurrence of vitiligo during nivolumab treatment may be correlated with favorable clinical outcome. © 2016 Japanese Dermatological Association.

  13. Probabilities of Earthquake Occurrences along the Sumatra-Andaman Subduction Zone

    NASA Astrophysics Data System (ADS)

    Pailoplee, Santi

    2017-03-01

    Earthquake activities along the Sumatra-Andaman Subduction Zone (SASZ) were clarified using the derived frequency-magnitude distribution in terms of the (i) most probable maximum magnitudes, (ii) return periods and (iii) probabilities of earthquake occurrences. The northern segment of SASZ, along the western coast of Myanmar to southern Nicobar, was found to be capable of generating an earthquake of magnitude 6.1-6.4 Mw in the next 30-50 years, whilst the southern segment of offshore of the northwestern and western parts of Sumatra (defined as a high hazard region) had a short recurrence interval of 6-12 and 10-30 years for a 6.0 and 7.0 Mw magnitude earthquake, respectively, compared to the other regions. Throughout the area along the SASZ, there are 70- almost 100% probabilities of the earthquake with Mw up to 6.0 might be generated in the next 50 years whilst the northern segment had less than 50% chance of occurrence of a 7.0 Mw earthquake in the next 50 year. Although Rangoon was defined as the lowest hazard among the major city in the vicinity of SASZ, there is 90% chance of a 6.0 Mw earthquake in the next 50 years. Therefore, the effective mitigation plan of seismic hazard should be contributed.

  14. Synchronous occurrence of neuroendocrine colon carcinoma and hairy cell leukemia.

    PubMed

    Salemis, Nikolaos S; Pinialidis, Dionisios; Tsiambas, Evangelos; Gakis, Christos; Nakos, Georgios; Sambaziotis, Dimitrios; Christofyllakis, Charalambos

    2011-09-01

    BACKGROUND-PURPOSE: The risk of secondary malignancy development in patients with hairy cell leukemia has been evaluated in several studies with varying results. The aim of this study is to describe a case of synchronous occurrence of neuroendocrine colon carcinoma and hairy cell leukemia. A 69-year-old man presented with rectal bleeding. Colonoscopy revealed a rectal tumor, whereas biopsy specimens revealed a poorly differentiated carcinoma. During the preoperative evaluation, pancytopenia was detected. At laparotomy, a mass was detected 16 cm from the anal verge and an anterior resection of the rectum was performed. Detailed histological and immunohistochemical analyses revealed a poorly differentiated neuroendocrine carcinoma of the rectum. Postoperative evaluation of pancytopenia revealed hairy cell leukemia. The patient was initially treated with chemotherapy for hairy cell leukemia followed by chemotherapy for neuroendocrine colon carcinoma. Survival was 44 months. To our knowledge, synchronous occurrence of neuroendocrine colon carcinoma and hairy cell leukemia has not been previously reported in the literature. Given the rare incidence of both entities in the general population, it is highly unlikely that they occurred together by chance. Further research is needed to determine what would be the optimal management options of patients with simultaneous hairy cell leukemia and a neuroendocrine colon cancer.

  15. Circadian occurrence of variceal bleeding in patients with liver cirrhosis.

    PubMed

    Siringo, S; Bolondi, L; Sofia, S; Hermida, R C; Gramantieri, L; Gaiani, S; Piscaglia, F; Carbone, C; Misitano, B; Corinaldesi, R

    1996-12-01

    Several clinical events have a rhythmicity over the 24 h period. We assessed the presence of periodic rhythm in the occurrence of haematemesis in patients with liver cirrhosis under different daylight regimens, namely during standard time and during daylight savings. Over a 48 month period there were 212 consecutive admissions of 118 cirrhotics with variceal bleeding. Complete data were available for 181 episodes of bleeding: 121 (66.9%) started with haematemesis and 60 (33.1%) started with melaena. One hundred and two (56%) episodes occurred during daylight savings and 79 (44%) occurred during standard time. The cosinor test showed a 24 h biphasic peak for the occurrence of haematemesis (09.45 and 21.45 h). Moreover, a biphasic diurnal asymmetric frequency was also found by multiple component rhythmometry. The time peaks of onset of variceal haemorrhage did not change significantly during standard time and daylight savings. Patients with more than one haematemesis episode significantly bled over the same time interval. The present study confirms that over the 24 h period variceal bleeding in cirrhotic patients occurs with a predictable rhythmicity that does not seem to be under the control of the light-dark cycle. The finding of a chronorisk for variceal haemorrhage addresses specific questions for pathophysiological studies as well as for new treatment strategies.

  16. Seroprevalence occurrence of viral hepatitis and HIV among hemodialysis patients

    NASA Astrophysics Data System (ADS)

    Kamal, Inass Mahmood; Mutar Mahdi, Batool

    2018-05-01

    Patients with chronic renal failure (CRF) were on maintenance invasive haemodialysis (HD) procedure. This procedure by itself affects immunity of the patients and they become more susceptible to viral infections. We investigate the occurrence of HBV HCV and HIV infections in patients with hemodialysis. A retrospective study of 430 endstage renal failure patients referred to hemodialysis department at AlKindy Teaching Hospital Baghdad, Iraq from January 2015 to January 2017 was conducted. Patients were investigated for HBsAg using enzymelabeled antigen test (ForesightEIAUSA) HCV Abs (IgG) specific immunoglobulin using a HCV enzymelabeled antigen test (ForesightEIAUSA) and anti HIV Abs (IgG) using enzymelabeled antigen test (ForesightEIAUSA). The frequency of HBV infection in the first year was not significant between males (111%) and females (000%)(P = 0295). About HCV also there are no significant differences between males (1263%) and females (931%)(P = 0347). After one year of follow up the frequencies of HBV and HCV were not significant between two sexes. Additionally none of the patients had an HIV infection. This study brings to light that HBV and HCV have the same frequencies in both genders and lower occurrence with time. Furthermore HIV was not detected in those patients.

  17. Occurrence, Distribution, and Accumulation of Pesticides in Exterior Residential Areas.

    PubMed

    Jiang, Weiying; Conkle, Jeremy L; Luo, Yuzhou; Li, Juying; Xu, Karen; Gan, Jay

    2016-12-06

    Pesticides are commonly applied around residential homes, but their occurrence on exterior surfaces (e.g., pavement) has not been thoroughly evaluated. We collected 360 dust samples from curbside gutters, sidewalks, and street surfaces at 40 houses in southern California to evaluate pesticide occurrence on urban paved surfaces as well as their spatial and temporal distributions. Pesticides and select degradates were ubiquitously detected in dust, with the median concentration of total target analytes at 85 μg kg -1 . A total of 75% of samples contained at least five pesticides. As a result of recurring pesticide applications, concentrations increased throughout the summer. The pyrethroids bifenthrin and permethrin accounted for 55% of total pesticides detected in the dust. The highest concentrations in dust were found on the sidewalk and in the gutter. Relative to indoor environments, human exposure risk to pesticides on paved surfaces was estimated to be lower, with the highest potential oral and dermal exposure predicted to be 38 ng day -1 for permethrin. The ubiquitous detection of pesticides on residential outdoor surfaces and the fact that the exterior concentrations did not correlate to the indoor areas highlight the necessity to measure pesticides in both indoor and outdoor areas for complete residential pesticide risk assessment.

  18. Occurrence of riverine wetlands on floodplains along a climatic gradient

    USGS Publications Warehouse

    Kroes, D.E.; Brinson, M.M.

    2004-01-01

    The relation between the occurrence of riverine wetlands in floodplains along a humid to semi-arid climatic continuum was studied in two regions. The first included 36 mid-reach streams from Colorado to Iowa, USA, a region with a broad range of PET ratios (potential evapotranspiration/precipitation) from 0.70 to 1.75. The second region included 16 headwater streams in eastern North Carolina with PET ratios ranging from 0.67 to 0.83. Wetland boundaries were identified in the field along transects perpendicular to the floodplain. The width of jurisdictional wetlands was compared with flood-prone width (FPW) and expressed as a percent. An increase in PET ratio corresponded to an exponential decrease in the percentage of the FPW that is wetland. Soil texture, duration of overbank flow, and stream order did not correlate with percentage of FPW that was wetland. Streams with a PET ratio greater than 0.98 did not have wetlands associated with them. Greater channel cross-sectional areas correlated positively with greater wetland widths in both study regions. Overbank flow did not appear to contribute to wetland prevalence. Supplemental ground-water sources, however, as indicated by greater base flows, could not be ruled out as sources contributing to wetland occurrence. ?? 2004, The Society of Wetland Scientists.

  19. Occurrence of human respiratory syncytial virus in summer in Japan.

    PubMed

    Shobugawa, Y; Takeuchi, T; Hibino, A; Hassan, M R; Yagami, R; Kondo, H; Odagiri, T; Saito, R

    2017-01-01

    In temperate zones, human respiratory syncytial virus (HRSV) outbreaks typically occur in cold weather, i.e. in late autumn and winter. However, recent outbreaks in Japan have tended to start during summer and autumn. This study examined associations of meteorological conditions with the numbers of HRSV cases reported in summer in Japan. Using data from the HRSV national surveillance system and national meteorological data for summer during the period 2007-2014, we utilized negative binomial logistic regression analysis to identify associations between meteorological conditions and reported cases of HRSV. HRSV cases increased when summer temperatures rose and when relative humidity increased. Consideration of the interaction term temperature × relative humidity enabled us to show synergistic effects of high temperature with HRSV occurrence. In particular, HRSV cases synergistically increased when relative humidity increased while the temperature was ⩾28·2 °C. Seasonal-trend decomposition analysis using the HRSV national surveillance data divided by 11 climate divisions showed that summer HRSV cases occurred in South Japan (Okinawa Island), Kyushu, and Nankai climate divisions, which are located in southwest Japan. Higher temperature and higher relative humidity were necessary conditions for HRSV occurrence in summer in Japan. Paediatricians in temperate zones should be mindful of possible HRSV cases in summer, when suitable conditions are present.

  20. An audit of some processing effects in aggregated occurrence records.

    PubMed

    Mesibov, Robert

    2018-01-01

    A total of ca 800,000 occurrence records from the Australian Museum (AM), Museums Victoria (MV) and the New Zealand Arthropod Collection (NZAC) were audited for changes in selected Darwin Core fields after processing by the Atlas of Living Australia (ALA; for AM and MV records) and the Global Biodiversity Information Facility (GBIF; for AM, MV and NZAC records). Formal taxon names in the genus- and species-groups were changed in 13-21% of AM and MV records, depending on dataset and aggregator. There was little agreement between the two aggregators on processed names, with names changed in two to three times as many records by one aggregator alone compared to records with names changed by both aggregators. The type status of specimen records did not change with name changes, resulting in confusion as to the name with which a type was associated. Data losses of up to 100% were found after processing in some fields, apparently due to programming errors. The taxonomic usefulness of occurrence records could be improved if aggregators included both original and the processed taxonomic data items for each record. It is recommended that end-users check original and processed records for data loss and name replacements after processing by aggregators.