Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm

PubMed Central

Woo, Hannah L.; O’Dell, Kaela B.; Utturkar, Sagar; McBride, Kathryn R.; Huntemann, Marcel; Clum, Alicia; Pillay, Manoj; Palaniappan, Krishnaveni; Varghese, Neha; Mikhailova, Natalia; Stamatis, Dimitrios; Reddy, T. B. K.; Ngan, Chew Yee; Daum, Chris; Shapiro, Nicole; Markowitz, Victor; Ivanova, Natalia; Kyrpides, Nikos; Woyke, Tanja; Brown, Steven D.

2016-01-01

Thalassospira sp. strain KO164 was isolated from eastern Mediterranean seawater and sediment laboratory microcosms enriched on insoluble organosolv lignin under oxic conditions. The near-complete genome sequence presented here will facilitate analyses into this deep-ocean bacterium’s ability to degrade recalcitrant organics such as lignin. PMID:27881538

Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm

DOE PAGES

Woo, Hannah L.; O’Dell, Kaela B.; Utturkar, Sagar; ...

2016-11-23

We isolated Thalassospirasp. strain KO164 from eastern Mediterranean seawater and sediment laboratory microcosms enriched on insoluble organosolv lignin under oxic conditions. Furthermore, an analysis of the deep-ocean bacterium’s ability to degrade recalcitrant organics such as lignin near-complete genome sequence, will be presented here.

Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Woo, Hannah L.; O’Dell, Kaela B.; Utturkar, Sagar

We isolated Thalassospirasp. strain KO164 from eastern Mediterranean seawater and sediment laboratory microcosms enriched on insoluble organosolv lignin under oxic conditions. Furthermore, an analysis of the deep-ocean bacterium’s ability to degrade recalcitrant organics such as lignin near-complete genome sequence, will be presented here.

Trace metal enrichment and organic matter sources in the surface sediments of Arabian Sea along southwest India (Kerala coast).

PubMed

Sreekanth, Athira; Mrudulrag, S K; Cheriyan, Eldhose; Sujatha, C H

2015-12-30

The geochemical distribution and enrichment of trace metals (Cd, Co, Cu, Fe, Mn, Ni, Pb and Zn) were determined in the surface sediments of Arabian Sea, along southwest India, Kerala coast. The results of geochemical indices indicated that surficial sediments of five transects are uncontaminated with respect to Mn, Zn and Cu, uncontaminated to moderately contaminated with Co and Ni, and moderately to strongly contaminated with Pb. The deposition of trace elements exhibited three different patterns i) Cd and Zn enhanced with settling biodetritus from the upwelled waters, ii) Pb, Co and Ni show higher enrichment, evidenced by the association through adsorption of iron-manganese nodules onto clay minerals and iii) Cu enrichment observed close to major urban sectors, initiated by the precipitation as Cu sulfides. Correlation, principal component analysis (PCA) and cluster analysis (CA) were used to confirm the origin information of metals and the nature of organic matter composition. Copyright © 2015 Elsevier Ltd. All rights reserved.

Understanding controls on redox processes in floodplain sediments of the Upper Colorado River Basin

DOE PAGES

Noël, Vincent; Boye, Kristin; Kukkadapu, Ravi K.; ...

2017-12-15

Floodplains, heavily used for water supplies, housing, agriculture, mining, and industry, are important repositories of organic carbon, nutrients, and metal contaminants. The accumulation and release of these species is often mediated by redox processes. By understanding the physicochemical, hydrological, and biogeochemical controls on the distribution and variability of sediment redox conditions we can develop conceptual and numerical models of contaminant transport within floodplains. The Upper Colorado River Basin (UCRB) is impacted by former uranium and vanadium ore processing, resulting in contamination by V, Cr, Mn, As, Se, Mo and U. Previous authors have suggested that sediment redox activity occurring withinmore » organic carbon-enriched bodies located below the groundwater level may be regionally important to the maintenance and release of contaminant inventories, particularly uranium. To help assess this hypothesis, vertical distributions of Fe and S redox states and sulfide mineralogy were assessed in sediment cores from three floodplain sites spanning a 250 km transect of the central UCRB. Our results support the hypothesis that organic-enriched reduced sediments are important zones of biogeochemical activity within UCRB floodplains. Furthermore, we found that the presence of organic carbon, together with pore saturation, are the key requirements for maintaining reducing conditions, which were dominated by sulfate-reduction products. Sediment texture was found to be of secondary importance and to moderate the response of the system to external forcing, such as oxidant diffusion. Consequently, fine-grain sediments are relatively resistant to oxidation in comparison to coarser-grained sediments. Exposure to oxidants consumes precipitated sulfides, with a disproportionate loss of mackinawite (FeS) as compared to the more stable pyrite. The accompanying loss of redox buffering capacity creates the potential for release of sequestered radionuclides and metals. Because of their redox reactivity and stores of metals, C, and N, organic-enriched sediments are likely to be important to nutrient and contaminant mobility within UCRB floodplain aquifers.« less

Understanding controls on redox processes in floodplain sediments of the Upper Colorado River Basin

DOE Office of Scientific and Technical Information (OSTI.GOV)

Noël, Vincent; Boye, Kristin; Kukkadapu, Ravi K.

Floodplains, heavily used for water supplies, housing, agriculture, mining, and industry, are important repositories of organic carbon, nutrients, and metal contaminants. The accumulation and release of these species is often mediated by redox processes. By understanding the physicochemical, hydrological, and biogeochemical controls on the distribution and variability of sediment redox conditions we can develop conceptual and numerical models of contaminant transport within floodplains. The Upper Colorado River Basin (UCRB) is impacted by former uranium and vanadium ore processing, resulting in contamination by V, Cr, Mn, As, Se, Mo and U. Previous authors have suggested that sediment redox activity occurring withinmore » organic carbon-enriched bodies located below the groundwater level may be regionally important to the maintenance and release of contaminant inventories, particularly uranium. To help assess this hypothesis, vertical distributions of Fe and S redox states and sulfide mineralogy were assessed in sediment cores from three floodplain sites spanning a 250 km transect of the central UCRB. Our results support the hypothesis that organic-enriched reduced sediments are important zones of biogeochemical activity within UCRB floodplains. Furthermore, we found that the presence of organic carbon, together with pore saturation, are the key requirements for maintaining reducing conditions, which were dominated by sulfate-reduction products. Sediment texture was found to be of secondary importance and to moderate the response of the system to external forcing, such as oxidant diffusion. Consequently, fine-grain sediments are relatively resistant to oxidation in comparison to coarser-grained sediments. Exposure to oxidants consumes precipitated sulfides, with a disproportionate loss of mackinawite (FeS) as compared to the more stable pyrite. The accompanying loss of redox buffering capacity creates the potential for release of sequestered radionuclides and metals. Because of their redox reactivity and stores of metals, C, and N, organic-enriched sediments are likely to be important to nutrient and contaminant mobility within UCRB floodplain aquifers.« less

A pilot study on remediation of sediments enriched by oyster farming wastes using granulated coal ash.

PubMed

Yamamoto, T; Kim, K H; Shirono, K

2015-01-15

In order to evaluate the ability of granulated coal ash (GCA), a byproduct of coal thermal electric power stations, to remove hydrogen sulfide from organically enriched sediments, a pilot study was carried out at oyster farming sites, where sediments were enriched with oyster feces and dead oysters. Concentration of hydrogen sulfide in the interstitial water of the sediment decreased to nearly zero in both experimental sites, whereas it remained over 0.2mg/l in the control site. Concentration of acid volatile sulfide (AVS) in the sediment also decreased significantly in both experimental sites, while remained over 0.4 mg/g in the control site. Increases were observed in both the number of benthic microalgae species and the individual number of benthic animals in the surface sediments. This may have been due to the decrease in hydrogen sulfide. Copyright © 2014 Elsevier Ltd. All rights reserved.

Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm.

PubMed

Woo, Hannah L; O'Dell, Kaela B; Utturkar, Sagar; McBride, Kathryn R; Huntemann, Marcel; Clum, Alicia; Pillay, Manoj; Palaniappan, Krishnaveni; Varghese, Neha; Mikhailova, Natalia; Stamatis, Dimitrios; Reddy, T B K; Ngan, Chew Yee; Daum, Chris; Shapiro, Nicole; Markowitz, Victor; Ivanova, Natalia; Kyrpides, Nikos; Woyke, Tanja; Brown, Steven D; Hazen, Terry C

2016-11-23

Thalassospira sp. strain KO164 was isolated from eastern Mediterranean seawater and sediment laboratory microcosms enriched on insoluble organosolv lignin under oxic conditions. The near-complete genome sequence presented here will facilitate analyses into this deep-ocean bacterium's ability to degrade recalcitrant organics such as lignin. Copyright © 2016 Woo et al.

Spatial dependence of reduced sulfur in Everglades dissolved organic matter controlled by sulfate enrichment

USGS Publications Warehouse

Poulin, Brett A.; Ryan, Joseph N.; Nagy, Kathryn L.; Stubbins, Aron; Dittmar, Thorsten; Orem, William H.; Krabbenhoft, David P.; Aiken, George R.

2017-01-01

Sulfate inputs to the Florida Everglades stimulate sulfidic conditions in freshwater wetland sediments that affect ecological and biogeochemical processes. An unexplored implication of sulfate enrichment is alteration of the content and speciation of sulfur in dissolved organic matter (DOM), which influences the reactivity of DOM with trace metals. Here, we describe the vertical and lateral spatial dependence of sulfur chemistry in the hydrophobic organic acid fraction of DOM from unimpacted and sulfate-impacted Everglades wetlands using X-ray absorption spectroscopy and ultrahigh-resolution mass spectrometry. Spatial variation in DOM sulfur content and speciation reflects the degree of sulfate enrichment and resulting sulfide concentrations in sediment pore waters. Sulfur is incorporated into DOM predominantly as highly reduced species in sulfidic pore waters. Sulfur-enriched DOM in sediment pore waters exchanges with overlying surface waters and the sulfur likely undergoes oxidative transformations in the water column. Across all wetland sites and depths, the total sulfur content of DOM correlated with the relative abundance of highly reduced sulfur functionality. The results identify sulfate input as a primary determinant on DOM sulfur chemistry to be considered in the context of wetland restoration and sulfur and trace metal cycling.

Influence of sediment organic carbon on estuarine benthic species of the US West Coast

EPA Science Inventory

Total organic carbon (TOC) is often used as an indicator of nutrient enrichment in estuarine environments. However, the determination of biologically relevant TOC criteria to indicate sediment quality is complicated by the relationship between TOC and grain size. Both variables...

Perennial Antarctic lake ice: an oasis for life in a polar desert

NASA Technical Reports Server (NTRS)

Priscu, J. C.; Fritsen, C. H.; Adams, E. E.; Giovannoni, S. J.; Paerl, H. W.; McKay, C. P.; Doran, P. T.; Gordon, D. A.; Lanoil, B. D.; Pinckney, J. L.

1998-01-01

The permanent ice covers of Antarctic lakes in the McMurdo Dry Valleys develop liquid water inclusions in response to solar heating of internal aeolian-derived sediments. The ice sediment particles serve as nutrient (inorganic and organic)-enriched microzones for the establishment of a physiologically and ecologically complex microbial consortium capable of contemporaneous photosynthesis, nitrogen fixation, and decomposition. The consortium is capable of physically and chemically establishing and modifying a relatively nutrient- and organic matter-enriched microbial "oasis" embedded in the lake ice cover.

Perennial Antarctic lake ice: an oasis for life in a polar desert.

PubMed

Priscu, J C; Fritsen, C H; Adams, E E; Giovannoni, S J; Paerl, H W; McKay, C P; Doran, P T; Gordon, D A; Lanoil, B D; Pinckney, J L

1998-06-26

The permanent ice covers of Antarctic lakes in the McMurdo Dry Valleys develop liquid water inclusions in response to solar heating of internal aeolian-derived sediments. The ice sediment particles serve as nutrient (inorganic and organic)-enriched microzones for the establishment of a physiologically and ecologically complex microbial consortium capable of contemporaneous photosynthesis, nitrogen fixation, and decomposition. The consortium is capable of physically and chemically establishing and modifying a relatively nutrient- and organic matter-enriched microbial "oasis" embedded in the lake ice cover.

Organic Matter Polymerization by Disulfide Bonding Near the Chemocline in Cariaco Basin

NASA Astrophysics Data System (ADS)

Raven, M. R.; Adkins, J. F.; Sessions, A. L.

2013-12-01

The preservation of organic carbon in sediments as kerogen is an essential pathway in the global carbon cycle, but the chemical reactions involved in kerogen formation remain poorly understood. Previous researchers have found that many sediments deposited under euxinic conditions contain sulfur-bearing non-polar lipids as well as disulfide bonds among lipid and carbohydrate monomers. It remains unclear, however, when during organic matter decomposition and diagenesis these different sulfur-bearing structures form, and how different environmental conditions affect the extent of organic matter sulfurization. We investigate organic sulfurization processes armed with a technique for measuring the sulfur-isotopic compositions of individual organosulfur compounds by coupled gas chromatography - inductively coupled plasma mass spectrometry. Organic compounds were extracted from sediments and water column sediment traps from Cariaco Basin, a euxinic basin in the Caribbean Sea. We measured the sulfur-isotopic compositions of both non-polar lipids and of derivatized disulfide-bound compounds from eight sediment trap profiles and a six-meter-long sediment core. In Cariaco Basin, lipid sulfurization processes appear to begin near the chemocline and continue in sediments on timescales of thousands of years. Slow diagenetic sulfurization in sediments produces lipid monomers with sulfur atoms in ring structures that are 34S-depleted relative to coexisting dissolved sulfide. Lipid monomers become progressively enriched in 34S over time, indicating ongoing formation coinciding with an increase in the amount of total sulfur in bulk kerogen. One of the most abundant monomers observed in Cariaco sediments, a phytol-related thiophene, is also produced intermittently near the chemocline. Phytol thiophene δ34S values in sediment traps are similar to those observed in shallow Cariaco sediments except during occasional ';enrichment events,' when phytol thiophene δ34S values increase to as high as -2‰. In contrast, disulfide bonding appears to affect both lipids and carbohydrates and occur exclusively at the chemocline on very short timescales of days to weeks. In both the water column and the sediments, the sulfur isotope ratios of disulfide-bound monosaccharides are dramatically 34S-enriched relative to dissolved sulfide at the chemocline (~-30‰), ranging from -11‰ to +9‰. Disulfide-bound phytenes, which likely derive from the same precursor compounds as phytol thiophenes, were observed in only a few of the sediment trap extracts and have sulfur-isotopic compositions near +4.5‰. These 34S-enriched compositions indicate that the source of sulfur for rapid disulfide bonding may be an intermediate sulfur species that is not in isotopic equilibrium with dissolved sulfide. Significantly, δ34S values for disulfide-bound compounds in Cariaco Basin appear to be set at the chemocline and stable during subsequent diagenesis, opening the possibility that organic sulfur isotopes may archive information about environmental conditions at the chemocline in low-maturity sediments. Disulfide bonding does not, however, appear to be the major process driving slower diagenetic sulfur incorporation into kerogen. Compound-specific organic sulfur isotope analysis makes it possible to distinguish the products of different lipid and carbohydrate sulfurization processes for the first time.

Enrichment of stream water with fecal indicator organisms from bottom sediments during baseflow periods

USDA-ARS?s Scientific Manuscript database

Fecal indicator organisms (FIOs) are generally believed to be present in surface waters due solely to direct deposition of feces or through transport in runoff. However, emerging evidence points toward hyporheic exchange between sediment pore water and the overlying water column during baseflow peri...

Characterization of organic matter in lake sediments from Minnesota and Yellowstone National Park

USGS Publications Warehouse

Dean, Walter E.

2006-01-01

Samples of sediment from lakes in Minnesota and Yellowstone National Park (YNP) were analyzed for organic carbon (OC), hydrogen richness by Rock-Eval pyrolysis, and stable carbon- and nitrogen-isotope composition of bulk organic matter. Values of delta 13C of lake plankton tend to be around -28 to -32 parts per thousand (0/00). Organic matter with values of delta 13C in the high negative 20s overlap with those of organic matter derived from C3 higher terrestrial plants but are at least 10 0/00 more depleted in 13C than organic matter derived from C4 terrestrial plants. If the organic matter is produced mainly by photosynthetic plankton and is not oxidized in the water column, there may be a negative correlation between H-richness (Rock-Eval pyrolysis H-index) and delta 13C, with more H-rich, algal organic matter having lower values of delta 13C. However, if aquatic organic matter is oxidized in the water column, or if the organic matter is a mixture of terrestrial and aquatic organic matter, then there may be no correlation between H-richness and carbon-isotopic composition. Values of delta 13C lower than about -28 0/00 probably indicate a contribution of bacterial biomass produced in the hypolimnion by chemoautotrophy or methanotrophy. In highly eutrophic lakes in which large amounts of 13C-depleted organic matter is continually removed from the epilimnion by photosynthesis throughout the growing season, the entire carbon reservoir in the epilimnion may become severely 13C-enriched so that 13C-enriched photosynthetic organic matter may overprint 13C-depleted chemosynthetic bacterial organic matter produced in the hypolimnon. Most processes involved with the nitrogen cycle in lakes, such as production of ammonia and nitrate, tend to produce 15N-enriched values of delta 15N. Most Minnesota lake sediments are 15N-enriched. However, some of the more OC-rich sediments have delta 15N values close to zero (delta 15N of air), suggesting that organic matter production is by nitrogen fixation, which further implies that nitrogen is limiting. Most lakes from YNP also have values of delta 15N near zero.

Effects of shelter and enrichment on the ecology and nutrient cycling of microbial communities of subtidal carbonate sediments.

PubMed

Forehead, Hugh I; Kendrick, Gary A; Thompson, Peter A

2012-04-01

The interactions between physical disturbances and biogeochemical cycling are fundamental to ecology. The benthic microbial community controls the major pathway of nutrient recycling in most shallow-water ecosystems. This community is strongly influenced by physical forcing and nutrient inputs. Our study tests the hypotheses that benthic microbial communities respond to shelter and enrichment with (1) increased biomass, (2) change in community composition and (3) increased uptake of inorganic nutrients from the water column. Replicate in situ plots were sheltered from physical disturbance and enriched with inorganic nutrients or left without additional nutrients. At t(0) and after 10 days, sediment-water fluxes of nutrients, O(2) and N(2) , were measured, the community was characterized with biomarkers. Autochthonous benthic microalgal (BMA) biomass increased 30% with shelter and a natural fivefold increase in nutrient concentration; biomass did not increase with greater enrichment. Diatoms remained the dominant taxon of BMA, suggesting that the sediments were not N or Si limited. Bacteria and other heterotrophic organisms increased with enrichment and shelter. Daily exchanges of inorganic nutrients between sediments and the water column did not change in response to shelter or nutrient enrichment. In these sediments, physical disturbance, perhaps in conjunction with nutrient enrichment, was the primary determinant of microbial biomass. © 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Periodic sediment shift in migrating ripples influences benthic microbial activity

NASA Astrophysics Data System (ADS)

Zlatanović, Sanja; Fabian, Jenny; Mendoza-Lera, Clara; Woodward, K. Benjamin; Premke, Katrin; Mutz, Michael

2017-06-01

Migrating bedforms have high levels of particulate organic matter and high rates of pore water exchange, causing them to be proposed as hot spots of carbon turnover in rivers. Yet, the shifting of sediments and associated mechanical disturbance within migrating bedforms, such as ripples, may stress and abrade microbial communities, reducing their activity. In a microcosm experiment, we replicated the mechanical disturbances caused by the periodic sediment shift within ripples under oligotrophic conditions. We assessed the effects on fungal and bacterial biomass ratio (F:B), microbial community respiration (CR), and bacterial production (BCP) and compared with stable undisturbed sediments. Interactions between periodic mechanical disturbance and sediment-associated particulate organic matter (POM) were tested by enriching sediments collected from migrating ripples with different qualities of POM (fish feces, leaf litter fragments and no addition treatments). F:B and BCP were affected by an interaction between mechanical disturbance and POM quality. Fish feces enriched sediments showed increased F:B and BCP compared to sediments with lower POM quality and responded with a decrease of F:B and BCP to sediment disturbance. In the other POM treatments F:B and BCP were not affected by disturbance. Microbial respiration was however reduced by mechanical disturbance to similar low activity levels regardless of POM qualities added, whereas fish feces enriched sediment showed short temporary boost of CR. With the worldwide proliferation of migrating sand ripples due to massive catchment erosion, suppressed mineralization of POM will increasingly affect stream metabolism, downstream transport of POM and carbon cycling from reach to catchment scale.

Redox Conditions and Related Color Change in Eastern Equatorial Pacific Sediments: IODP Site U1334

NASA Astrophysics Data System (ADS)

Kordesch, W. E.; Gussone, N. C.; Hathorne, E. C.; Kimoto, K.; Delaney, M. L.

2011-12-01

This study was prompted by a 65 m thick brown-green color change in deep-sea sediments of IODP Site U1334 (0-38 Ma, 4799 m water depth) that corresponds to its equatorial crossing (caused by the Northward movement of the pacific plate). Green sediment is a visual indicator of reducing conditions in sediment due to enhanced organic matter deposition and burial. Here we use geochemical redox indicators to characterize the effect of equatorial upwelling on bottom water. The modern redox signal is captured in porewater profiles (nitrate, manganese, iron, sulfate) while trace metal Enrichment Factors (EF) in bulk sediment (manganese, uranium, molybdenum, rhenium) normalized to the detrital component (titanium) record redox state at burial. To measure export productivity we also measure biogenic barium. Porewater profiles reveal suboxic diagenesis; profiles follow the expected sequence of nitrate, manganese oxide, and iron oxide reduction with increasing depth. Constant sulfate (~28 μM) implies anoxia has not occurred. Bulk sediment Mn EF are enriched (EF > 1) throughout the record (Mn EF = 15-200) while U and Mo enrichment corresponds to green color and equatorial proximity (U EF = 4-19; Mo EF = 0-7). Constant Mn enrichment implies continuous oxygenation. Uranium and Mo enrichment near the equator represents suboxic conditions also seen in the porewater. Low Re concentrations (below detection) provide additional evidence against anoxia. A comparison of Mn EF from total digestions to samples treated with an additional reductive cleaning step distinguishes between Mn-oxides and Mn-carbonates, indicating oxygenated and reducing conditions respectively. Mn-carbonate occurrence agrees with U and Mo EF; conditions were more reducing near the equator. Bio-Ba shows significant variability over this interval (22-99 mmol g-1). Our geochemical results indicate that bottom waters became suboxic at the equator as a result of equatorial upwelling-influenced increases in organic matter sedimentation. Comparison of results to Site U1335 (0-26 Ma, 4327 m water depth) will test the relative importance of equatorial proximity.

Indices, multispecies and synthesis descriptors in benthic assessments: Intertidal organic enrichment from oyster farming

NASA Astrophysics Data System (ADS)

Quintino, Victor; Azevedo, Ana; Magalhães, Luísa; Sampaio, Leandro; Freitas, Rosa; Rodrigues, Ana Maria; Elliott, Michael

2012-09-01

Intertidal off-bottom oyster culture is shown to cause organic enrichment of the shore and although there are two stressors of interest (the presence of a structure, the trestles, and also the sediment and organic waste from the oysters), these can be separated and their relative impacts determined using an appropriate nested experimental design and data treatments. Although no artificial food sources are involved, the oysters feeding activity and intensity of culture enhances biodeposition and significantly increases the sediment fines content and total organic matter. This in general impoverished the benthic community in culture areas rather than a species succession with the installation of opportunists or a resulting increase in the abundance and biomass of benthic species; the findings can be a direct consequence of the intertidal situation which is less-amenable recruitment of species more common to the subtidal environment. Thus the most appropriate biological descriptors to diagnose the effects associated with the organic enrichment were the multispecies abundance data as well as the primary biological variables species richness and abundance. The effects were however spatially and statistically significantly confined to the area located directly underneath the culture bags compared to the corridors located between the trestles, which do not show such enrichment effects. Synthesis biotic indices were much less effective to diagnose the benthic alterations associated with this organic enrichment. These results show that special attention must be paid when using indices in areas where the organic enrichment induces an impoverishment of the benthic community but not necessarily a species replacement with the installation of opportunists.

Late Archean rise of aerobic microbial ecosystems

PubMed Central

Eigenbrode, Jennifer L.; Freeman, Katherine H.

2006-01-01

We report the 13C content of preserved organic carbon for a 150 million-year section of late Archean shallow and deepwater sediments of the Hamersley Province in Western Australia. We find a 13C enrichment of ≈10‰ in organic carbon of post-2.7-billion-year-old shallow-water carbonate rocks relative to deepwater sediments. The shallow-water organic-carbon 13C content has a 29‰ range in values (−57 to −28‰), and it contrasts with the less variable but strongly 13C-depleted (−40 to −45‰) organic carbon in deepwater sediments. The 13C enrichment likely represents microbial habitats not as strongly influenced by assimilation of methane or other 13C-depleted substrates. We propose that continued oxidation of shallow settings favored the expansion of aerobic ecosystems and respiring organisms, and, as a result, isotopic signatures of preserved organic carbon in shallow settings approached that of photosynthetic biomass. Facies analysis of published carbon-isotopic records indicates that the Hamersley shallow-water signal may be representative of a late Archean global signature and that it preceded a similar, but delayed, 13C enrichment of deepwater deposits. The data suggest that a global-scale expansion of oxygenated habitats accompanied the progression away from anaerobic ecosystems toward respiring microbial communities fueled by oxygenic photosynthesis before the oxygenation of the atmosphere after 2.45 billion years ago. PMID:17043234

Elevated rates of organic carbon, nitrogen, and phosphorus accumulation in a highly impacted mangrove wetland

NASA Astrophysics Data System (ADS)

Sanders, Christian J.; Eyre, Bradley D.; Santos, Isaac R.; Machado, Wilson; Luiz-Silva, Wanilson; Smoak, Joseph M.; Breithaupt, Joshua L.; Ketterer, Michael E.; Sanders, Luciana; Marotta, Humberto; Silva-Filho, Emmanoel

2014-04-01

The effect of nutrient enrichment on mangrove sediment accretion and carbon accumulation rates is poorly understood. Here we quantify sediment accretion through radionuclide tracers to determine organic carbon (OC), total nitrogen (TN), and total phosphorus (TP) accumulation rates during the previous 60 years in both a nutrient-enriched and a pristine mangrove forest within the same geomorphological region of southeastern Brazil. The forest receiving high nutrient loads has accumulated OC, TN, and TP at rates that are fourfold, twofold, and eightfold respectively, higher than those from the undisturbed mangrove. Organic carbon and TN stable isotopes (δ13C and δ15N) reflect an increased presence of organic matter (OM) originating with either phytoplankton, benthic algae, or another allochthonous source within the more rapidly accumulated sediments of the impacted mangrove. This suggests that the accumulation rate of OM in eutrophic mangrove systems may be enhanced through the addition of autochthonous and allochthonous nonmangrove material.

Response of Benthic Foraminifera to Organic Matter Quantity and Quality and Bioavailable Concentrations of Metals in Aveiro Lagoon (Portugal)

PubMed Central

Martins, Maria Virgínia Alves; Silva, Frederico; Laut, Lazaro L. M.; Frontalini, Fabrizio; Clemente, Iara M. M. M.; Miranda, Paulo; Figueira, Rubens; Sousa, Silvia H. M.; Dias, João M. Alveirinho

2015-01-01

This work analyses the distribution of living benthic foraminiferal assemblages of surface sediments in different intertidal areas of Ria de Aveiro (Portugal), a polihaline and anthropized coastal lagoon. The relationships among foraminiferal assemblages in association with environmental parameters (temperature, salinity, Eh and pH), grain size, the quantity and quality of organic matter (enrichment in carbohydrates, proteins and lipids), pollution caused by metals, and mineralogical data are studied in an attempt to identify indicators of adaptability to environmental stress. In particular, concentrations of selected metals in the surficial sediment are investigated to assess environmental pollution levels that are further synthetically parameterised by the Pollution Load Index (PLI). The PLI variations allowed the identification of five main polluted areas. Concentrations of metals were also analysed in three extracted phases to evaluate their possible mobility, bioavailability and toxicity in the surficial sediment. Polluted sediment in the form of both organic matter and metals can be found in the most confined zones. Whereas enrichment in organic matter and related biopolymers causes an increase in foraminifera density, pollution by metals leads to a decline in foraminiferal abundance and diversity in those zones. The first situation may be justified by the existence of opportunistic species (with high reproduction rate) that can live in low oxic conditions. The second is explained by the sensitivity of some species to pressure caused by metals. The quality of the organic matter found in these places and the option of a different food source should also explain the tolerance of several species to pollution caused by metals, despite their low reproductive rate in the most polluted areas. In this study, species that are sensitive and tolerant to organic matter and metal enrichment are identified, as is the differential sensitivity/tolerance of some species to metals enrichment. PMID:25706860

Level, source identification, and risk analysis of heavy metal in surface sediments from river-lake ecosystems in the Poyang Lake, China.

PubMed

Zhang, Hua; Jiang, Yinghui; Ding, Mingjun; Xie, Zhenglei

2017-09-01

The concentrations, sources, and risks of heavy metals (Fe, Al, Mn, Cr, Co, Ni, Cu, Zn, As, Cd, W, Pb, and Tl) in sediments in five river-lake ecosystems in the Poyang Lake region were studied. The concentrations of the heavy metals varied spatially, with most of the highest concentrations in the Raohe river-lake ecosystem (RH). All heavy metals except As, Cd, W, and Tl were enriched in sediments possessing high total organic carbon contents or in finer sediments. Based on enrichment factors and statistical methods, it was found that Cd in sediments in the Xiushui (XS), Ganjiang (GJ), Xinjiang (XJ) river-lake ecosystems, and RH; Mn in the XS, GJ, and RH; and W in the XS and GJ were greatly affected by anthropogenic inputs. Moreover, the origins of Cu, Zn, and As require more attention due to the high concentrations found. The high enrichment factor of Cd in the sediments indicated that this metal might cause significant pollution in the environment. The results of the modified potential ecological risk index revealed that the XS, GJ, RH, and XJ were at considerable ecological risk, while the sediments in the Fuhe river-lake ecosystem (FH) were at moderate ecological risk, with Cd contributing the highest proportion of risk. The hazard score fundamentally validated the modified potential ecological risk analysis and revealed a mean toxicity of 57.80% to the benthic organisms in the RH.

Influence of sea squirt (Halocynthia roretzi) aquaculture on benthic-pelagic coupling in coastal waters: A study of the South Sea in Korea

NASA Astrophysics Data System (ADS)

Lee, Jae Seong; Kim, Sung-Han; Kim, Yong-Tae; Hong, Sok Jin; Han, Jeong Hee; Hyun, Jung-Ho; Shin, Kyung-Hoon

2012-03-01

The influence of sea squirt aquaculture on benthic-pelagic coupling was evaluated in semi-enclosed Korean coastal waters with an in situ benthic chamber and results show for the first time that suspended sea squirt cultures play an important role in benthic-pelagic coupling in the coastal zone. Measurements of primary production, vertical particulate fluxes, and benthic fluxes were made at two stations, a sea squirt (Halocynthia roretzi) farm (SSF) and an area of organic-matter-enriched sediment in Jinhae Bay. The vertical material fluxes of organic carbon, nitrogen, and biogenic silicate (BSi) were significantly higher at SSF than in Jinhae Bay, indicating massive biodeposits in the surface sediments at SSF. The organic carbon oxidation rates (Cox) were estimated after correction for CaCO3 dissolution. The average Cox at SSF (204 mmol C m-2 d-1) was significantly higher than that in the organic-enriched Jinhae Bay sediment (77 mmol C m-2 d-1). The organic carbon burial fluxes were determined using vertical profiles of organic carbon of up to 30 cm and the sedimentation rate calculated from the excess 210Pb distribution. At both stations, ˜95% of the settled organic carbon was oxidized and only ˜5% was buried in the deep sediment layer. The benthic fluxes of dissolved inorganic nitrogen and phosphate at SSF were 2-12 times higher than in Jinhae Bay, corresponding to 85%, and 270%, respectively, of the requirements for primary production.

Toxic Metals Enrichment in the Surficial Sediments of a Eutrophic Tropical Estuary (Cochin Backwaters, Southwest Coast of India)

PubMed Central

Martin, G. D.; George, Rejomon; Shaiju, P.; Muraleedharan, K. R.; Nair, S. M.; Chandramohanakumar, N.

2012-01-01

Concentrations and distributions of trace metals (Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, and Zn) in surficial sediments of the Cochin backwaters were studied during both monsoon and pre-monsoon periods. Spatial variations were in accordance with textural charaterstics and organic matter content. A principal component analysis distinguished three zones with different metal accumulation capacity: (i) highest levels in north estuary, (ii) moderate levels in central zone, and (iii) lowest levels in southern part. Trace metal enrichments are mainly due to anthropogenic contribution of industrial, domestic, and agricultural effluents, whose effect is enhanced by settling of metals due to organic flocculation and inorganic precipitation associated with salinity changes. Enrichments factors using Fe as a normalizer showed that metal contamination was the product of anthropogenic activities. An assessment of degree of pollution-categorized sediments as moderately polluted with Cu and Pb, moderately-to-heavily polluted with Zn, and heavily-to-extremely polluted with Cd. Concentrations at many sites largely exceed NOAA ERL (e.g., Cu, Cr, and Pb) or ERM (e.g., Cd, Ni, and Zn). This means that adverse effects for benthic organisms are possible or even highly probable. PMID:22645488

Evaluation of elemental enrichments in surface sediments off southwestern Taiwan

NASA Astrophysics Data System (ADS)

Chen, Chen-Tung; Kandasamy, Selvaraj

2008-05-01

Surface slices of 20 sediment cores, off southwestern Taiwan, and bed sediment of River Kaoping were measured for major and trace elements (Al, As, Ca, Cd, Cl, Cr, Cu, Fe, K, Mg, Mn, Na, Ni, P, Pb, S, Si, Ti, V, and Zn) to evaluate the geochemical processes responsible for their distribution, including elemental contamination. Major element/Al ratio and mean grain size indicate quartz-dominated, coarse grained sediments that likely derived from sedimentary rocks of Taiwan and upper crust of Yangtze Craton. Bi-plot of SiO2 versus Fe2O{3/T} suggests the possible iron enrichment in sediments of slag dumping sites. Highest concentrations of Cr, Mn, P, S, and Zn found in sediments of dumping sites support this. Correlation analysis shows dual associations, detrital and organic carbon, for Cr, P, S, and V with the latter association typical for sediments in dumping sites. Normalization of trace elements to Al indicates high enrichment factors (>2) for As, Cd, Pb, and Zn, revealing contamination. Factor analysis extracted four geochemical associations with the principal factor accounted for 25.1% of the total variance and identifies the combined effects of dumped iron and steel slag-induced C-S-Fe relationship owing to authigenic precipitation of Fe-Mn oxyhydroxides and/or metal sulfides, and organic matter complexation of Fe, Mn, Ca, Cr, P, and V. Factors 2, 3, and 4 reveal detrital association (Ti, Al, Ni, Pb, Cu, and V), effect of sea salt (Cl, Mg, Na, and K) and anthropogenic component (As and Zn)-carbonate link, respectively, in the investigated sediments.

Influence of sediment-organic matter quality on growth and polychlorobiphenyl bioavailability in Echinodermata (Amphiura filiformis)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gunnarsson, J.S.; Granberg, M.E.; Nilsson, H.C.

Sediment total organic carbon (TOC) content is considered to be a primary food source for benthic invertebrates and a major factor influencing the partitioning and bioavailability of sediment-associated organic contaminants. Most studies report that both toxicity and uptake of sediment-associated contaminants by benthic organisms are inversely proportional to sediment TOC content. The aim of this study was to determine the importance of the TOC quality for the bioavailability of sediment-associated organic contaminants and the growth of benthic macrofauna. The common infaunal brittle star Amphiura filiformis was exposed to a base sediment covered by a {sup 14}C-polychlorobipenyl (3,3{prime}4,4{prime}-{sup 14}C-tetrachlorobiphenyl (TCB)) contaminatedmore » top layer (0--2 cm), enriched to the same TOC content with 31 g TOC/m{sup 2} of different quality and origin. The following carbon sources, ranging from labile to refractory, were used: (1) green macroalga (Ulva lactuca), (2) brown macroalga (Ascophyllum nodosum), (3) eelgrass (Zostera Marina), (4) phytoplankton (Ceratium spp.), and (5) lignins of terrestrial origin. Characterization of the organic matter quality was accomplished by measuring the content of amino acids, lipids, C, N, and polyphenolic compounds. The reactivity of the sedimentary organic matter was assessed by means of respiration and dissolved inorganic nitrogen flux measurements. The experiment was carried out in 1-L glass jars, each containing four brittle stars and the contaminated and enriched sediment. The jars were circulated in a flow-through mode with filtered seawater. Somatic growth (regeneration of a precut arm) and bioaccumulation of {sup 14}C-TCB were measured at 10 sampling occasions during 48 d of exposure. Growth rates, TCB uptake rates, and steady-state concentrations differed significantly between treatments and were correlated to the qualities of the organic substrates. The greatest TCB accumulation and growth were observed in treatments with the most labile organic substrates and the lowest accumulation and growth were seen with the most refractory substrates. Results from this experiment suggest that the bioaccumulation of organic contaminants in benthic infauna is dependent on the nutritional quality of the sedimentary organic matter.« less

Effect of penguin and seal excrement on mercury distribution in sediments from the Ross Sea region, East Antarctica.

PubMed

Nie, Yaguang; Liu, Xiaodong; Sun, Liguang; Emslie, Steven D

2012-09-01

Total mercury (Hg) concentration and several other geochemical parameters were determined for five sediment profiles from the Antarctic Ross Sea region. Our data exhibit significant positive correlations between Hg concentration and total organic carbon (TOC) content in all profiles, suggesting the predominant role of organic matter (OM) as a Hg carrier. The OM in the sediments originates primarily from penguin guano and algae. High Hg content in guano and a positive correlation between Hg and a guano bio-element (phosphorus, P) in the ornithogenic sediment profiles (MB6, BI and CC) indicate that Hg was strongly influenced by guano input. The bottom sediments of MB6 with seal hairs contain relatively high Hg. This increase is attributed to the input of seal excrement, suggesting that sedimentary Hg may be an effective trophic-level indicator from seals to penguins. The enrichment factor (EF) for Hg was calculated and the results indicated apparent Hg enrichment in the sediment profiles from the Ross Sea region caused by bio-vectors such as penguins and seals. Compared with typical sediments from other sites in Antarctica and the SQGs (sediment quality guidelines), the total amount of Hg in our study area is still not considered to be adversely high. Copyright © 2012 Elsevier B.V. All rights reserved.

Geochemistry of Peruvian near-surface sediments

NASA Astrophysics Data System (ADS)

Böning, Philipp; Brumsack, Hans-Jürgen; Böttcher, Michael E.; Schnetger, Bernhard; Kriete, Cornelia; Kallmeyer, Jens; Borchers, Sven Lars

2004-11-01

Sixteen short sediment cores were recovered from the upper edge (UEO), within (WO) and below (BO) the oxygen minimum zone (OMZ) off Peru during cruise 147 of R/V Sonne. Solids were analyzed for major/trace elements, total organic carbon, total inorganic carbon, total sulfur, the stable sulfur isotope composition (δ 34S) of pyrite, and sulfate reduction rates (SRR). Pore waters were analyzed for dissolved sulfate/sulfide and δ 34S of sulfate. In all cores highest SRR were observed in the top 5 cm where pore water sulfate concentrations varied little due to resupply of sulfate by sulfide oxidation and/or diffusion of sulfate from bottom water. δ 34S of dissolved sulfate showed only minor downcore increases. Strong 32S enrichments in sedimentary pyrite (to -48‰ vs. V-CDT) are due to processes in the oxidative part of the sulfur cycle in addition to sulfate reduction. Manganese and Co are significantly depleted in Peruvian upwelling sediments most likely due to mobilization from particles settling through the OMZ, whereas release of both elements from reducing sediments only seems to occur in near-coastal sites. Cadmium, Mo and Re are exceptionally enriched in WO sediments (<600 m water depth). High Re and moderate Cd and Mo enrichments are seen in BO sediments (>600 m water depth). Re/Mo ratios indicate anoxic and suboxic conditions for WO and BO sediments, respectively. Cadmium and Mo downcore profiles suggest considerable contribution to UEO/WO sediments by a biodetrital phase, whereas Re presumably accumulates via diffusion across the sediment-water interface to precipitation depth. Uranium is distinctly enriched in WO sediments (due to sulfidic conditions) and in some BO sediments (due to phosphorites). Silver transfer to suboxic BO sediments is likely governed by diatomaceous matter input, whereas in anoxic WO sediments Ag is presumably trapped due to sulfide precipitation. Cadmium, Cu, Zn, Ni, Cr, Ag, and T1 predominantly accumulate via biogenic pre-concentration in plankton remains. Rhenium, Sb, As, V, U and Mo are enriched in accordance with seawater TE availability. Lead and Bi enrichment in UEO surface sediments is likely contributed by anthropogenic activity (mining). Accumulation rates of TOC, Cd, Mo, U, and V from Peruvian and Namibian sediments exceed those from the Oman Margin and Gulf of California due to enhanced preservation off Peru and Namibia.

Reciprocal experimental transplantations to assess effects of organic enrichment on the recolonization of benthic macrofauna in a subtropical estuary.

PubMed

Gern, Fabiana Regina; Lana, Paulo da Cunha

2013-02-15

Coastal benthic habitats are usually in a state of continuous recolonization as a consequence of natural disturbances or human activities. Recolonization patterns can be strongly affected by the quality of the sediment. We evaluated herein the macrobenthic recolonization of organically enriched sediments through a manipulative experiment involving reciprocal transplants between contaminated and non-contaminated intertidal areas. Regardless of the experimental treatments, the density of the polychaete Capitella sp. was extremely high in the contaminated area as well as the density of the gastropod Cylichna sp. in the non-contaminated area. We rejected the hypothesis that differences in sediment quality would determine macrofaunal recolonization at least in the considered scales of space in meters and time in weeks. The recolonization process in a subtropical estuarine environment was strongly dependent on the migration of adults present in the sediments adjacent to the experimental units. Copyright © 2012 Elsevier Ltd. All rights reserved.

Community Composition of Nitrous Oxide-Related Genes in Salt Marsh Sediments Exposed to Nitrogen Enrichment.

PubMed

Angell, John H; Peng, Xuefeng; Ji, Qixing; Craick, Ian; Jayakumar, Amal; Kearns, Patrick J; Ward, Bess B; Bowen, Jennifer L

2018-01-01

Salt marshes provide many key ecosystem services that have tremendous ecological and economic value. One critical service is the removal of fixed nitrogen from coastal waters, which limits the negative effects of eutrophication resulting from increased nutrient supply. Nutrient enrichment of salt marsh sediments results in higher rates of nitrogen cycling and, commonly, a concurrent increase in the flux of nitrous oxide, an important greenhouse gas. Little is known, however, regarding controls on the microbial communities that contribute to nitrous oxide fluxes in marsh sediments. To address this disconnect, we generated profiles of microbial communities and communities of micro-organisms containing specific nitrogen cycling genes that encode several enzymes ( amoA, norB, nosZ) related to nitrous oxide flux from salt marsh sediments. We hypothesized that communities of microbes responsible for nitrogen transformations will be structured by nitrogen availability. Taxa that respond positively to high nitrogen inputs may be responsible for the elevated rates of nitrogen cycling processes measured in fertilized sediments. Our data show that, with the exception of ammonia-oxidizing archaea, the community composition of organisms involved in the production and consumption of nitrous oxide was altered under nutrient enrichment. These results suggest that previously measured rates of nitrous oxide production and consumption are likely the result of changes in community structure, not simply changes in microbial activity.

Evidence for only minor contributions from bacteria to sedimentary organic carbon

NASA Technical Reports Server (NTRS)

Hartgers, W. A.; Sinninghe Damste, J. S.; Requejo, A. G.; Allan, J.; Hayes, J. M.; de Leeuw, J. W.

1994-01-01

Because their molecular signatures are often prominent in extracts of sediments, bacteria are thought to be important contributors to petroleum source beds. It has been shown recently, however, that abundances of biomarkers do not always reflect relative contributions to sedimentary organic carbon (Corg). The contribution of photosynthetic green sulphur bacteria to sediments can be assessed effectively because the diagenetic products of distinctive carotenoids from these organisms occur widely and their biomass is isotopically labelled, being enriched in 13C. We show here that, although sediments and oils from the Western Canada and Williston basins contain prominent biomarkers of photosynthetic bacteria, the absence of 13C enrichment in the total Corg requires that the bacterial contribution is in fact minimal. Although the importance of bacterial reworking of sedimentary debris cannot be doubted, we argue that our findings, when considered in conjunction with those from other settings, suggest that bacterial biomass may commonly represent only a minor component of total Corg in carbonaceous rocks.

Enrichment of a microbial culture capable of reductive debromination of the flame retardant tetrabromobisphenol-A, and identification of the intermediate metabolites produced in the process.

PubMed

Arbeli, Ziv; Ronen, Zeev

2003-12-01

Tetrabromobisphenol-A is a reactive flame retardant used in the production of many plastic polymers. In previous research, it was demonstrated that anaerobic microorganisms from contaminated sediment debrominate tetrabromobisphenol-A to bisphenol-A, but an enrichment culture was not established. The current study was carried out to identify the intermediate metabolites in this process and to determine the factors facilitating enrichment of debrominating microorganisms. During the enrichment process in an anaerobic semi-continuous batch reactor, tetrabromobisphenol-A debromination gradually slowed down with concurrent accumulation of three intermediate products. These compounds were tentatively identified using GC-MS as tri-, di-, and mono-brominated bisphenol-A. GC-MS and HPLC analyses showed one dominant metabolite of dibromobisphenol-A, and NMR analysis identified it as 2,2'-dibromobisphenol-A. Addition of sterile sediment (15% wt/wt) to the reactor stimulated debromination of tetrabromobisphenol-A. Furthermore, different solid amendments such as surface soil and pulverized gray chalk from the site subsurface (100 m below ground) were also stimulating agents. We conclude that organic matter is involved in stimulation since the stimulation effect of the sediment, soil and gray chalk was abolished after it was heat-treated to 550 degrees C. Our study suggests that the debrominating culture requires some organic components found in the sediment, soil, and chalk in order to sustain activity and perhaps to survive. The possible mechanisms of stimulation by these solids are discussed.

Influence of macrofaunal assemblages and environmental heterogeneity on microphytobenthic production in experimental systems.

PubMed

Dyson, Kirstie E; Bulling, Mark T; Solan, Martin; Hernandez-Milian, Gema; Raffaelli, David G; White, Piran C L; Paterson, David M

2007-10-22

Despite the complexity of natural systems, heterogeneity caused by the fragmentation of habitats has seldom been considered when investigating ecosystem processes. Empirical approaches that have included the influence of heterogeneity tend to be biased towards terrestrial habitats; yet marine systems offer opportunities by virtue of their relative ease of manipulation, rapid response times and the well-understood effects of macrofauna on sediment processes. Here, the influence of heterogeneity on microphytobenthic production in synthetic estuarine assemblages is examined. Heterogeneity was created by enriching patches of sediment with detrital algae (Enteromorpha intestinalis) to provide a source of allochthonous organic matter. A gradient of species density for four numerically dominant intertidal macrofauna (Hediste diversicolor, Hydrobia ulvae, Corophium volutator, Macoma balthica) was constructed, and microphytobenthic biomass at the sediment surface was measured. Statistical analysis using generalized least squares regression indicated that heterogeneity within our system was a significant driving factor that interacted with macrofaunal density and species identity. Microphytobenthic biomass was highest in enriched patches, suggesting that nutrients were obtained locally from the sediment-water interface and not from the water column. Our findings demonstrate that organic enrichment can cause the development of heterogeneity which influences infaunal bioturbation and consequent nutrient generation, a driver of microphytobenthic production.

Environmental assessment of aromatic hydrocarbons-contaminated sediments of the Mexican Salina Cuz Bay.

PubMed

González-Macías, C; Schifter, I; Lluch-Cota, D B; Méndez-Rodríguez, L; Hernández-Vázquez, S

2007-10-01

Concentrations of total aromatic hydrocarbons and extractable organic matter in the water column and sediment were determined in samples collected in the course of the last 20 years from the Salina Cruz Harbor, México, to assess the degree of organic contamination. In sediments, organic compounds accumulate in shallow areas mostly associated with extractable organic matter and fine fractions. Calculated geocumulation index and enrichment factors suggest that contamination could be derived from anthropogenic activities attributed to harbor and ship scrapping activities, as well as transboundary source. Concentration of total aromatic hydrocarbons (as chrysene equivalents) ranged from 0.01 to 534 microg l(-1) in water, and from 0.10 to 2,160 microg g(-1) in sediments. Total aromatic concentration of 5 microg g(-1) is proposed as background concentration.

Impact of estuarine gradients on reductive dechlorination of 1,2,3,4-tetrachlorodibenzo-p-dioxin in river sediment enrichment cultures.

PubMed

Dam, Hang T; Häggblom, Max M

2017-02-01

Polychlorinated dibenzo-p-dioxins (PCDDs) are among the most persistent organic pollutants. Although the total input of PCDDs into the environment has decreased substantially over the past four decades, their input via non-point sources is still increasing, especially in estuarine metropolitan areas. Here we report on the microbially mediated reductive dechlorination of PCDDs in anaerobic enrichment cultures established from sediments collected from five locations along the Hackensack River, NJ and investigate the impacts of sediment physicochemical characteristics on dechlorination activity. Dechlorination of 1,2,3,4-tetrachlorodibenzo-p-dioxin (1,2,3,4-TeCDD) and abundance of Dehalococcoides spp. negatively correlated with salinity and sulfate concentration in sediments used to establish the cultures. 1,2,3,4-TeCDD was dechlorinated to a lesser extent in cultures established from sediments from the tidally influenced estuarine mouth of the river. In cultures established from low salinity sediments, 1,2,3,4-TeCDD was reductively dechlorinated with the accumulation of 2-monochlorodibenzo-p-dioxin as the major product. Sulfate concentrations above 2 mM inhibited 1,2,3,4-TecDD dechlorination activity. Consecutive lateral- and peri- dechlorination took place in enrichment cultures with a minimal accumulation of 2,3-dichlorodibenzo-p-dioxin in active cultures. A Dehalococcoides spp. community was enriched and accounted for up to 64% of Chloroflexi detected in these sediment cultures. Copyright © 2016 Elsevier Ltd. All rights reserved.

Distribution, enrichment and accumulation of heavy metals in coastal sediments of Alang-Sosiya ship scrapping yard, India.

PubMed

Reddy, M Srinivasa; Basha, Shaik; Sravan Kumar, V G; Joshi, H V; Ramachandraiah, G

2004-06-01

Since its inception in 1982, the Alang-Sosiya yard has become the largest ship scrapping works in the world. Several hundreds of ships arrive every year. The degree of heavy metal contamination has been studied in bulk and fine sediments from the intertidal zone of this ship scrapping yard, two stations, one on either side at 5 km distance and one reference station 60 km distance near Mahuva, towards the south. The samples have been subjected to a total digestion technique and analysed for elements: Cd, Co, Cu, Cr, Fe, Mn, Ni, Pb, Zn and Al, and %TOC. The absolute metal concentrations reflected variations in BF and FF sediment samples with organic matter content. Enrichment factors (EF) and geoaccumulation indices (Igeo) have been calculated and the relative contamination levels are assessed at these sites. At Alang-Sosiya, the enrichment of heavy metals has been observed to be relatively high.

Distribution and Potential Toxicity of Trace Metals in the Surface Sediments of Sundarban Mangrove Ecosystem, Bangladesh

NASA Astrophysics Data System (ADS)

Kumar, A.; Ramanathan, A.; Mathukumalli, B. K. P.; Datta, D. K.

2014-12-01

The distribution, enrichment and ecotoxocity potential of Bangladesh part of Sundarban mangrove was investigated for eight trace metals (As, Cd, Cr, Cu, Fe, Mn, Pb and Zn) using sediment quality assessment indices. The average concentration of trace metals in the sediments exceeded the crustal abundance suggesting sources other than natural in origin. Additionally, the trace metals profile may be a reflection of socio-economic development in the vicinity of Sundarban which further attributes trace metals abundance to the anthropogenic inputs. Geoaccumulation index suggests moderately polluted sediment quality w.r.t. Ni and As and background concentrations for Al, Fe, Mn, Cu, Zn, Pb, Co, As and Cd. Contamination factor analysis suggested low contamination by Zn, Cr, Co and Cd, moderate by Fe, Mn, Cu and Pb while Ni and As show considerable and high contamination, respectively. Enrichment factors for Ni, Pb and As suggests high contamination from either biota or anthropogenic inputs besides natural enrichment. As per the three sediment quality guidelines, Fe, Mn, Cu, Ni, Co and As would be more of a concern with respect to ecotoxicological risk in the Sundarban mangroves. The correlation between various physiochemical variables and trace metals suggested significant role of fine grained particles (clay) in trace metal distribution whereas owing to low organic carbon content in the region the organic complexation may not be playing significant role in trace metal distribution in the Sundarban mangroves.

Textural and geochemical characteristics of marine sediments in the SW Gulf of Mexico: implications for source and seasonal change.

PubMed

Rosales-Hoz, Leticia; Carranza-Edwards, Arturo; Martinez-Serrano, Raymundo G; Alatorre, Miguel Angel; Armstrong-Altrin, John S

2015-04-01

Two oceanographic cruises were taken during the winter (SAV I, November and December 2007) and summer (SAV II, July and August 2008) across the mouth of the Papaloapan River in the Gulf of Mexico. Surficial sediment samples were collected from shallow (16-30 m), intermediate (30 to 80 m), and deeper areas (≥300 m). Shallow water sediments are coarser, better-sorted, and primarily composed of sands during the winter, while those found in the summer are finer. At depths greater than 30 m, sediments are primarily fine-grained no matter the season. Major element analysis from shallow areas indicates higher SiO2 concentrations during the windy season with negative correlation against Al2O3 during both seasons, following the respective abundances of sand and muds. High organic carbon content was observed in shallow areas during the summer. Trace metals V, Ni, Cu, Zn, Pb, Li, Cr, Co, and Ba were evaluated. The first six metals showed higher average concentration in the deeper areas, although the highest values at some individual sampling sites for Cr, Co, Cu, and Ba were observed in the coastal area. Factor and cluster analysis were used to explain the sediment distribution pattern and the factors that determine the sediment characteristics within the study area. In shallow areas, four clusters were observed during the winter and five during the summer. The geochemical characteristics of the samples in each cluster suggest association with fluvial sediment input, textural characteristics, heavy minerals, and Cu and Ba concentration. To evaluate the variations in heavy metal concentration, metal enrichment factors (EFs) were calculated. Enrichment in V, Cr, Co, Zn, Ba, and Pb was detected at certain sites, whereas Cu behaved differently. The distribution of Cu enrichment suggests that it may be of natural origin, associated with the lithology of the volcanic continental area. The minor enrichment observed for other elements may be associated with river discharge. According to sediment quality guidelines, trace metal concentrations of Cu, Pb, and Zn present occasional risks to aquatic organisms.

Sediment deposition and selected water-quality characteristics in Cedar Lake and Lake Olathe, Northeast Kansas, 2000

USGS Publications Warehouse

Mau, D.P.

2002-01-01

The Lake Olathe watershed, located in northeast Kansas, was investigated using bathymetric survey data and reservoir bottom-sediment cores to determine sediment deposition, water-quality trends, and transport of nutrients (phosphorus and nitrogen species), selected trace elements, selected pesticides, and diatoms as indicators of eutrophic (organic-enriched and depleted oxygen supply) conditions. To determine sediment deposition and loads, bathymetric data from Cedar Lake and Lake Olathe, both located in the Lake Olathe watershed, were collected in 2000 and compared to historical topographic data collected when the lakes were built. Approximately 338 acre-feet of sediment deposition has occurred in Cedar Lake since dam closure in 1938, and 317 acre-feet has occurred at Lake Olathe since 1956. Mean annual sediment deposition was 5.45 acre-feet per year (0.89 acre-feet per year per square mile) for Cedar Lake and 7.0 acre-feet per year (0.42 acre-feet per year per square mile) for Lake Olathe. Mean annual sediment loads for the two reservoirs were 9.6 million pounds per year for Cedar Lake and 12.6 million pounds per year for Lake Olathe. Mean concentrations of total phosphorus in bottom-sediment samples from Cedar Lake ranged from 1,370 to 1,810 milligrams per kilogram, and concentrations in bottom-sediment samples from Lake Olathe ranged from 588 to 1,030 milligrams per kilogram. The implication of large total phosphorus concentrations in the bottom sediment of Cedar Lake is that inflow into Cedar Lake is rich in phosphorus and that adverse water-quality conditions could affect water quality in downstream Lake Olathe through discharge of water from Cedar Lake to Lake Olathe via Cedar Creek. Mean annual phosphorus loads transported from the Lake Olathe watershed were estimated to be 14,700 pounds per year for Cedar Lake and 9,720 pounds per year for Lake Olathe. The mean annual phosphorus yields were estimated to be 3.74 pounds per acre per year for Cedar Lake and 0.91 pound per acre per year for Lake Olathe. Phosphorus yields in the Cedar Lake watershed were largest of the six Kansas impoundment watersheds recently studied. Concentrations of total ammonia plus organic nitrogen as nitrogen in bottom sediment increased from upstream to downstream in both Cedar Lake and Lake Olathe. Mean concentrations of total ammonia plus organic nitrogen as nitrogen (N) ranged from 2,000 to 2,700 milligrams per kilogram in bottom-sediment samples from Cedar Lake and from 1,300 to 2,700 milligrams per kilogram in samples from Lake Olathe. There was no statistical significance between total ammonia plus organic nitrogen as nitrogen and depth of bottom sediment. Concentrations of six trace elements in bottom sediment from Cedar Lake and Lake Olathe (arsenic, chromium, copper, lead, nickel, and zinc) exceeded the U.S. Environmental Protection Agency Threshold Effects Levels (TELs) sediment-quality guidelines for aquatic organisms in sediment except for one lead concentration. Probable Effects Levels (PELs) for trace elements, however, were not exceeded at either lake. Organochlorine and organophosphate insecticides were not detected in bottom-sediment samples from either Cedar Lake or Lake Olathe, but the acetanilide herbicides alachlor and metolachlor were detected in sediment from both lakes. The U.S. Environmental Protection Agency has not proposed TEL or PEL guideline concentrations for bottom sediment for any of the organophosphate, acetanilide, or triazine pesticides. The diatoms (microscopic, single-celled organisms) Cyclotella bodanica, an indicator of low organic-enriched water, and Cyclotella meneghiniana, an indicator of organic-enriched water, were both present in bottom sediment from Lake Olathe. The presence of both of these diatoms suggests varying periods of low and high eutrophication in Lake Olathe from 1956 to 2000. The concentrations of two species in bottom sediment from Cedar Lake, Aulacoseira cf alpigena and Cyclotella meneg

Heavy Metal Enrichment in laminated lake sediments from N-Germany and N-Poland: Geochemical background, enrichment history and land surface changes

NASA Astrophysics Data System (ADS)

Hoelzmann, Philipp; Brauer, Achim; Dräger, Nadine; Kienel, Ulrike; Obremska, Milena; Ott, Florian; Słowinski, Michał

2017-04-01

For three lake sediment records, situated in rural environments in NE-Germany (Lake Tiefer See) and N-Poland (Lake Czechowskie, Lake Głęboczek), we present a detailed heavy metal enrichment history with sub-decadal resolution for the last 200 years. We determine the local and specific geogenic background values on the base of heavy-metal analysis of pre-industrial sediments and different sediment types (e.g. calcareous gyttja, organic gyttja etc.). These results provide means to calculate and quantify anthropogenic heavy metal accumulations and enrichment factors as well as to define regional measures for a state of reference, reflecting natural conditions without human impact. All three lakes show a similar pattern of relatively low heavy metal concentrations and only Pb, Zn and Cd show a clear parallel pattern of enrichment starting around 1850. This heavy metal enrichment mainly results from atmospheric input due to increasing industrialization within the framework of the Industrial Revolution. Highest concentrations of Cd, Zn, and Pb occur around 1960 to 1980 and thereafter a clear pattern of declining anthropogenic input is registered. This data is supplemented by calculations of mass accumulation rates to determine heavy metal input to the lakes for the past 200 years. For Lake Czechowskie the heavy metal input to the lake is compared to an on average five year resolved pollen record that reflects changes in land use and vegetation.

Carbon Characteristics and Biogeochemical Processes of Uranium Accumulating Organic Matter Rich Sediments in the Upper Colorado River Basin

NASA Astrophysics Data System (ADS)

Boye, K.; Noel, V.; Tfaily, M. M.; Dam, W. L.; Bargar, J.; Fendorf, S. E.

2015-12-01

Uranium plume persistence in groundwater aquifers is a problem on several former ore processing sites on floodplains in the upper Colorado River Basin. Earlier observations by our group and others at the Old Rifle Site, CO, have noted that U concentrations are highest in organic rich, fine-grained, and, therefore, diffusion limited sediment material. Due to the constantly evolving depositional environments of floodplains, surficial organic matter may become buried at various stages of decomposition, through sudden events such as overbank flooding and through the slower progression of river meandering. This creates a discontinuous subsurface distribution of organic-rich sediments, which are hotspots for microbial activity and thereby central to the subsurface cycling of contaminants (e.g. U) and biologically relevant elements (e.g. C, N, P, Fe). However, the organic matter itself is poorly characterized. Consequently, little is known about its relevance in driving biogeochemical processes that control U fate and transport in the subsurface. In an investigation of soil/sediment cores from five former uranium ore processing sites on floodplains distributed across the Upper Colorado River Basin we confirmed consistent co-enrichment of U with organic-rich layers in all profiles. However, using C K-edge X-ray Absorption Spectroscopy (XAS) coupled with Fourier-Transformed Ion-Cyclotron-Resonance Mass-Spectroscopy (FT-ICR-MS) on bulk sediments and density-separated organic matter fractions, we did not detect any chemical difference in the organic rich sediments compared to the surrounding coarser-grained aquifer material within the same profile, even though there were differences in organic matter composition between the 5 sites. This suggests that U retention and reduction to U(IV) is independent of C chemical composition on the bulk scale. Instead it appears to be the abundance of organic matter in combination with a limited O2 supply in the fine-grained material that stimulate anaerobic microbial processes responsible for U enrichment. Thus, the chemical composition of organic matter is subordinate to the physical environment and total organic matter content in controlling U reduction and retention processes.

Decomposition of algal lipids in clay-enriched marine sediment under oxic and anoxic conditions

NASA Astrophysics Data System (ADS)

Lü, Dongwei; Song, Qian; Wang, Xuchen

2010-01-01

A series of laboratory incubation experiments were conducted to examine the decomposition of algal organic matter in clay-enriched marine sediment under oxic and anoxic conditions. During the 245-day incubation period, changes in the concentrations of TOC, major algal fatty acid components (14:0, 16:0, 16:1, 18:1 and 20:5), and n-alkanes (C16-C23) were quantified in the samples. Our results indicate that the organic matters were degraded more rapidly in oxic than anoxic conditions. Adsorption of fatty acids onto clay minerals was a rapid and reversible process. Using a simple G model, we calculated the decomposition rate constants for TOC, n-alkanes and fatty acids which ranged from 0.017-0.024 d-1, 0.049-0.103 d-1 and 0.011 to 0.069 d-1, respectively. Algal organic matter degraded in two stages characterized by a fast and a slow degradation processes. The addition of clay minerals montmorillonite and kaolinite to the sediments showed significant influence affecting the decomposition processes of algal TOC and fatty acids by adsorption and incorporation of the compounds with clay particles. Adsorption/association of fatty acids by clay minerals was rapid but appeared to be a slow reversible process. In addition to the sediment redox and clay influence, the structure of the compounds also played important roles in affecting their degradation dynamic in sediments.

Prediction of cadmium enrichment in reclaimed coastal soils by classification and regression tree

NASA Astrophysics Data System (ADS)

Ru, Feng; Yin, Aijing; Jin, Jiaxin; Zhang, Xiuying; Yang, Xiaohui; Zhang, Ming; Gao, Chao

2016-08-01

Reclamation of coastal land is one of the most common ways to obtain land resources in China. However, it has long been acknowledged that the artificial interference with coastal land has disadvantageous effects, such as heavy metal contamination. This study aimed to develop a prediction model for cadmium enrichment levels and assess the importance of affecting factors in typical reclaimed land in Eastern China (DFCL: Dafeng Coastal Land). Two hundred and twenty seven surficial soil/sediment samples were collected and analyzed to identify the enrichment levels of cadmium and the possible affecting factors in soils and sediments. The classification and regression tree (CART) model was applied in this study to predict cadmium enrichment levels. The prediction results showed that cadmium enrichment levels assessed by the CART model had an accuracy of 78.0%. The CART model could extract more information on factors affecting the environmental behavior of cadmium than correlation analysis. The integration of correlation analysis and the CART model showed that fertilizer application and organic carbon accumulation were the most important factors affecting soil/sediment cadmium enrichment levels, followed by particle size effects (Al2O3, TFe2O3 and SiO2), contents of Cl and S, surrounding construction areas and reclamation history.

Anaerobic Redox Cycling of Iron by Freshwater Sediment Microorganisms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weber, Karrie A.; Urrutia, Matilde M.; Churchill, Perry F.

2006-01-01

The potential for microbially-mediated anaerobic redox cycling of iron (Fe) was examined in a first-generation enrichment culture of freshwater wetland sediment microorganisms. MPN enumerations revealed the presence of significant populations of Fe(III)-reducing (ca. 108 cells mL-1) and Fe(II)-oxidizing, nitrate-reducing organisms (ca. 105 cells mL-1) in the sediment used to inoculate the enrichment cultures. Nitrate reduction commenced immediately following inoculation of acetate-containing (ca. 1 mM) medium with a small quantity (1% vol/vol) of wetland sediment, and resulted in the transient accumulation of NO2- and production of a mixture of end-products including NH4+. Fe(III) oxide (high surface area goethite) reduction took placemore » - after NO3- was depleted and continued until all the acetate was utilized. Addition of NO3 after Fe(III) reduction ceased resulted in the immediate oxidation of Fe(II) coupled to reduction of + NO3-to NH4 . No significant NO2- accumulation was observed during nitrate-dependent Fe(II) oxidation. No Fe(II) oxidation occurred in pasteurized controls. Microbial community structure in the enrichment was monitored by DGGE analysis of PCR amplified 16s rDNA and RT-PCR amplified 16S rRNA, as well as by construction of 16S rDNA clone libraries for four different time points during the experiment. Strong similarities in dominant members of the microbial community were observed in the Fe(III) reduction and nitrate-dependent Fe(II) oxidation phases of the experiment, specifically the common presence of organisms closely related (= 95% sequence similarity) to the genera Geobacter and Dechloromonas. These results indicate that the wetland sediments contained organisms such as Geobacter sp. which are capable of both + dissimilatory Fe(III) reduction and oxidation of Fe(II) with reduction of NO3-reduction to NH4 . Our findings suggest that microbially-catalyzed nitrate-dependent Fe(II) oxidation has the potential to contribute to a dynamic anaerobic Fe redox cycle in freshwater sediments.« less

Effect of biostimulants on 2,4,6-trinitrotoluene (TNT) degradation and bacterial community composition in contaminated aquifer sediment enrichments.

PubMed

Fahrenfeld, Nicole; Zoeckler, Jeffrey; Widdowson, Mark A; Pruden, Amy

2013-04-01

2,4,6-Trinitrotoluene (TNT) is a toxic and persistent explosive compound occurring as a contaminant at numerous sites worldwide. Knowledge of the microbial dynamics driving TNT biodegradation is limited, particularly in native aquifer sediments where it poses a threat to water resources. The purpose of this study was to quantify the effect of organic amendments on anaerobic TNT biodegradation rate and pathway in an enrichment culture obtained from historically contaminated aquifer sediment and to compare the bacterial community dynamics. TNT readily biodegraded in all microcosms, with the highest biodegradation rate obtained under the lactate amended condition followed by ethanol amended and naturally occurring organic matter (extracted from site sediment) amended conditions. Although a reductive pathway of TNT degradation was observed across all conditions, denaturing gradient gel electrophoresis (DGGE) analysis revealed distinct bacterial community compositions. In all microcosms, Gram-negative γ- or β-Proteobacteria and Gram-positive Negativicutes or Clostridia were observed. A Pseudomonas sp. in particular was observed to be stimulated under all conditions. According to non-metric multidimensional scaling analysis of DGGE profiles, the microcosm communities were most similar to heavily TNT-contaminated field site sediment, relative to moderately and uncontaminated sediments, suggesting that TNT contamination itself is a major driver of microbial community structure. Overall these results provide a new line of evidence of the key bacteria driving TNT degradation in aquifer sediments and their dynamics in response to organic carbon amendment, supporting this approach as a promising technology for stimulating in situ TNT bioremediation in the subsurface.

Sediment DIN fluxes and preferential recycling of benthic microalgal nitrogen in a shallow macrotidal estuary

USGS Publications Warehouse

Tobias, C.; Giblin, A.; McClelland, J.; Tucker, J.; Peterson, B.

2003-01-01

Sediment-water fluxes of NH4+, NO3-, dissolved inorganic carbon, and O2 were measured in cores collected from the upper Rowley River estuary, Massachusetts, and used to calculate rates of organic nitrogen (N) mineralization, nitrification, and coupled and direct denitrification (DNF). The cores contained 15N label in benthic microalgae (BMA) and in NO3- in the overlying water as a result of an ongoing whole-estuary 15NO 3- enrichment study (NISOTREX II). The tracer allowed for estimation of gross NO3- regeneration in sediments and the contribution of BMA derived N to total mineralization. The mean mineralization rate between sites was 16.0 ?? 2.0 mmol N m-2 d-1. Approximately 13 to 56% of the mineralized N was nitrified at rates ranging from 1.8 to 10.1 mmol N m-2 d-1. Total denitrification was dominated by direct DNF (3.6 mmol N m-2 d -1) furthest upstream, where NO3- concentrations were highest. Coupled DNF was most important (8.0 mmol N m -2 d-1) in the sediments with high nitrification and low water column NO3-. A gross NO3- flux from sediments to water of 0.9 to 2.1 mmol N m-2 d-1 was estimated from the isotope dilution of ??15NO 3- in the overlying water of the cores. The isotope dilution seen in the cores was also detected as a deviation from conservative ??15NO3- mixing along estuarine transects. Incorporation of this NO3- regeneration into the DNF calculations effectively increased the estimate of direct DNF by up to 50% and decreased the coupled DNF estimate by up to 220%. Increasing ?? 15NH4+ in the water of the cores indicated that the 15N-labelled BMA were preferentially mineralized over bulk sediment organic N. Additional 15N enrichments in the sediment bacterial biomarker diaminopimelic acid showed a link among 15N-labeled BMA, active bacteria, and 15NH 4+released to the overlying water. Based on ?? 15NH4+ enrichments in the cores, BMA accounted for approximately 50 to 100% of the N mineralized. An isotopic enrichment of ??15NH4+ above background in the estuary was observed at a magnitude consistent with the core-based rates of BMA mineralization. These results provide further evidence that BMA are not unidirectional sinks for water column-dissolved organic nitrogen, but instead act to turn over N between sediments and estuarine water on the scale of days.

Removal of organic matter and electricity generation of sediments from Progreso, Yucatan, Mexico, in a sediment microbial fuel cell.

PubMed

González-Gamboa, Nancy Karina; Valdés-Lozano, David Sergio; Barahona-Pérez, Luis Felipe; Alzate-Gaviria, Liliana; Domínguez-Maldonado, Jorge Arturo

2017-02-01

Sediment microbial fuel cells (SMFCs) are devices that generate electrical energy through sediments rich in organic matter (OM). The present study assessed the potential of sediments collected at two sites in Yucatan, Mexico, (the swamp of Progreso port and Yucalpetén dock) to be used in these electrochemical devices. Sediments were collected during the rainy and winter seasons and were monitored in the SMFC for 120 days through electrochemical and physicochemical characterization. OM removal in the SMFC ranged from 8.1-18.01%, generating a maximum current density of 232.46 mA/cm 2 and power density of 95.85 mW/cm 2 . SUVA analysis indicated that with a young soil, the ratio E4/E6 presented evidence directly related to the degradation of aromatic and aliphatic compound formation, implying humification and, therefore, sediment enrichment.

A reassessment of the sources and importance of land-derived organic matter in surface sediments from the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Goñi, Miguel A.; Ruttenberg, Kathleen C.; Eglinton, Timothy I.

1998-09-01

Organic matter in surface sediments from two onshore-offshore transects in the northwestern Gulf of Mexico was characterized by a variety of techniques, including elemental, stable carbon, radiocarbon, and molecular-level analyses. In spite of the importance of the Mississippi River as a sediment source, there is little evidence for a significant terrigenous input based on the low carbon:nitrogen ratios (8-5) and the enriched δ 13C values of bulk sedimentary organic carbon (-19.7‰ to -21.7‰). Radiocarbon analyses, on the other hand, yield depleted Δ 14C values (-277‰ to -572‰) which indicate that a significant fraction of the sedimentary organic carbon (OC) in all these surface sediments must be relatively old and most likely of allochthonous origin. CuO oxidations yield relatively low quantities of lignin products (0.4-1.4 mg/100 mg OC) along with compounds derived from proteins, polysaccharides, and lipids. Syringyl:vanillyl and cinnamyl:vanillyl ratios (averaging 1.6 and 0.5, respectively) and acid:aldehyde ratios for both vanillyl and syringyl phenols (averaging 0.8 and 1.2, respectively) indicate that the lignin present in sediments originates from nonwoody angiosperm sources and is highly degraded. The δ 13C values of lignin phenols in shelf sediments are relatively depleted in 13C (averaging -26.3‰) but are increasingly enriched in 13C at the slope sites (averaging -17.5‰ for the two deepest stations). We interpret these molecular and isotopic compositions to indicate that a significant fraction (≥50%) of the lignin and, by inference, the land-derived organic carbon in northwestern Gulf of Mexico sediments ultimately originated from C 4 plants. The source of this material is likely to be soil organic matter eroded from the extensive grasslands of the Mississippi River drainage basin. Notably, the mixed C 4 and C 3 source and the highly degraded state of this material hampers its recognition and quantification in shelf and slope sediments. Our data are consistent with higher than previously estimated inputs of land-derived organic carbon to regions of the ocean, such as the Gulf of Mexico, with significant sources of terrigenous C 4-derived organic matter.

Impact of terrestrial mining and intensive agriculture in pollution of estuarine surface sediments: Spatial distribution of trace metals in the Gulf of Urabá, Colombia.

PubMed

Vallejo Toro, Pedro Pablo; Vásquez Bedoya, Luis Fernando; Correa, Iván Darío; Bernal Franco, Gladys Rocío; Alcántara-Carrió, Javier; Palacio Baena, Jaime Alberto

2016-10-15

The Gulf of Urabá (northwestern Colombia) is a geostrategic region, rich in biodiversity and natural resources. Its economy is mainly based on agribusinesses and mining activities. In this research is determined the impact of these activities in bottom surface sediments of the estuary. Thus, grain size, total organic carbon, total nitrogen, carbonates, Ag, Al, Ca, Cr, Cu, Fe, Hg, Mg, Mn, Ni, Pb and Zn concentrations from 17 surface sediment samples were obtained and enrichment factors (EF) as well as geo-accumulation indices (Igeo) were calculated to determine the contamination level in the gulf. EF and Igeo values revealed that the estuary is extremely contaminated with Ag and moderately contaminated with Zn. Therefore, the observed enrichment of Ag may be explained as a residue of the extraction of gold and platinum-group metals and the enrichment with Zn associated mainly to pesticides used in banana plantations. Copyright © 2016 Elsevier Ltd. All rights reserved.

Influence of organic carbon on estuarine benthic infauna of the US west coast - March 3

EPA Science Inventory

Total organic carbon (TOC) is often used as an indicator of nutrient enrichment in estuarine environments. However, the determination of biologically relevant TOC criteria to indicate sediment condition is complicated by the relationship between TOC and grain size. Both variabl...

Radiocarbon content of lignin-enriched fraction in core sediment from Lake Biwa, central Japan

NASA Astrophysics Data System (ADS)

Kitagawa, Hiroyuki; Lim, Jaesoo; Takemura, Keiji; Hayashida, Akira; Haraguchi, Tsuyoshi

2010-04-01

The transport and deposition of terrestrially derived organic matter (TOM) into lake and ocean is a key but poorly constrained aspect of the modern global carbon cycle. An attempt has been done for estimating a transport time of TOM from the drainage basin of Lake Biwa, the largest lake in Japan. We have determined the 14C contents of the lignin-enriched fraction of the core sediment from the central part of Lake Biwa. The age of lignin-enriched fraction at the deposition time was estimated to be 7.5 × 10 3 years for the last glacial interval. Even in Lake Biwa with more than 100 rivers from the relatively small drainage basin (3850 km 2), TOM was transported at very long time (>10 3 years).

Seasonal variations and environmental risk assessment of trace elements in the sediments of Uppanar River estuary, southern India.

PubMed

Gopal, V; Nithya, B; Magesh, N S; Jayaprakash, M

2018-04-01

Twenty four surface sediments were gathered from the Uppanar river estuary, southern India to evaluate the trace element contamination risk in the sediments. The circulation of organic matter and calcium carbonate were controlled by algal blooms and shell fragments. Moreover, the concentrations of iron and manganese in the estuarine sediments were possibly contributed by riverine sources and geogenic processes. The geoaccumulation index, enrichment factor and contamination factor reveals that the sediments were contaminated by copper and chromium. The pollution load index recommends that the estuarine sediments have the risk of pollution. The sediment pollution index highlights that the majority of the sediments are low polluted sediments. The potential ecological risk index discloses that the Uppanar river estuary is under moderate risk. The statistical analysis reveals that the organic matter content is managed by fine fractions and the majority of the trace elements are associated with each other having similar origin. Copyright © 2018 Elsevier Ltd. All rights reserved.

Effects of Wood Pollution on Pore-Water Sulfide Levels and Eelgrass Germination

NASA Astrophysics Data System (ADS)

Ekelem, C.

2016-02-01

Historically, sawmills released wood waste onto coastal shorelines throughout the Pacific Northwest of the USA, enriching marine sediments with organic material. The increase in organic carbon boosts the bacterial reduction of sulfate and results in the production of a toxic metabolite, hydrogen sulfide. Hydrogen sulfide is a phytotoxin and can decrease the growth and survival of eelgrass. This is a critical issue since eelgrass, Zostera marina, forms habitat for many species, stabilizes sediment, and plays a role in nutrient cycling and sediment chemistry. The objective of our study was to determine the effects of wood debris on sediment pore-water hydrogen sulfide concentrations and eelgrass germination. To test the impact of wood inputs on sulfide production and seed germination, we conducted a laboratory mesocosm experiment, adding sawdust to marine sediments and measuring the sulfide levels weekly. We subsequently planted seeds in the mesocosms and measured germination rates. Higher concentrations of sawdust led to higher levels of pore-water hydrogen sulfide and drastically slower eelgrass germination rates. Treatments with greater than 10% wood enrichment developed free sulfide concentrations of 0.815 (± 0.427) mM after 118 days, suggesting sediments with greater than 10% wood pollution may have threateningly high pore-water hydrogen sulfide levels. These results can be used to set thresholds for remediation efforts and guide seed distribution in wood polluted areas.

Influence of macrofaunal assemblages and environmental heterogeneity on microphytobenthic production in experimental systems

PubMed Central

Dyson, Kirstie E; Bulling, Mark T; Solan, Martin; Hernandez-Milian, Gema; Raffaelli, David G; White, Piran C.L; Paterson, David M

2007-01-01

Despite the complexity of natural systems, heterogeneity caused by the fragmentation of habitats has seldom been considered when investigating ecosystem processes. Empirical approaches that have included the influence of heterogeneity tend to be biased towards terrestrial habitats; yet marine systems offer opportunities by virtue of their relative ease of manipulation, rapid response times and the well-understood effects of macrofauna on sediment processes. Here, the influence of heterogeneity on microphytobenthic production in synthetic estuarine assemblages is examined. Heterogeneity was created by enriching patches of sediment with detrital algae (Enteromorpha intestinalis) to provide a source of allochthonous organic matter. A gradient of species density for four numerically dominant intertidal macrofauna (Hediste diversicolor, Hydrobia ulvae, Corophium volutator, Macoma balthica) was constructed, and microphytobenthic biomass at the sediment surface was measured. Statistical analysis using generalized least squares regression indicated that heterogeneity within our system was a significant driving factor that interacted with macrofaunal density and species identity. Microphytobenthic biomass was highest in enriched patches, suggesting that nutrients were obtained locally from the sediment–water interface and not from the water column. Our findings demonstrate that organic enrichment can cause the development of heterogeneity which influences infaunal bioturbation and consequent nutrient generation, a driver of microphytobenthic production. PMID:17698480

Paleoproterozoic mantle enrichment beneath the Fennoscandian Shield: Isotopic insight from carbonatites and lamprophyres

NASA Astrophysics Data System (ADS)

Woodard, Jeremy; Huhma, Hannu

2015-11-01

The isotope geochemistry of carbonatite from Naantali, southwest Finland as well as lamprophyres from North Savo, eastern Finland and the NW Ladoga region, northwest Russia has been investigated. These Paleoproterozoic dykes represent melting of an enriched mantle source spread over a 96,000 km2 area within the Fennoscandian Shield and intruded during post-collisional extension. The carbonatites have εNd(T) ranging from -0.8 to + 0.4, while lamprophyres have εNd(T) between -0.8 and + 0.3. 87Sr/86Sr ratios from the primary carbonatite samples from Naantali form a tight cluster between 0.70283 and 0.70303. For the lamprophyres, 87Sr/86Sr ratios range from 0.70327-0.70339 from NW Ladoga and 0.70316-0.70327 from North Savo. These characteristics are consistent with derivation from an enriched mantle showing an EMII trend, formed when sediments of mixed Archean and Proterozoic provenance were recycled back into the mantle via subduction during the preceding Svecofennian orogeny. Linear mixing of these subducted sediments and depleted mantle shows that a multistage process of enrichment is required to produce the observed isotope compositions. Batch melting of the subducted sediment first generated hydrous alkaline silicate melt, which crystallised as mica- and amphibole-rich veins in the mantle wedge. Continued melting of the subducted material under higher P-T conditions produced carbonatite melt, which infiltrated preferentially into this vein network. Assuming the silicate melt exerts greater influence on 87Sr/86Sr ratios while the carbonatite more greatly affects 143Nd/144Nd ratios, the model predicts significant regional variation in the silicate metasomatism with more consistent carbonatite metasomatism throughout the Fennoscandian subcontinental lithospheric mantle. The subducted sediments were likely also rich in organic matter, resulting in highly negative δ13C in mantle carbonates. The model predicts a higher content of organic carbon in the sediments in close proximity to the Archean continent, decreasing with distance.

Selective nature and inherent variability of interrill erosion across prolonged rainfall simulation

NASA Astrophysics Data System (ADS)

Hu, Y.; Kuhn, N. J.; Fister, W.

2012-04-01

Sediment of interrill erosion has been generally recognized to be selectively enriched with soil organic carbon (SOC) and fine fractions (clay/silt-sized particles or aggregates) in comparison to source area soil. Limited kinetic energy and lack of concentrated runoff are the dominant factors causing selective detachment and transportation. Although enrichment ratios of SOC (ERsoc) in eroded sediment were generally reported > 1, the values varied widely. Causal factors to variation, such as initial soil properties, rainfall properties and experimental conditions, have been extensively discussed. But less attention was directed to the potential influence of prolonged rainfall time onto the temporal pattern of ERsoc. Conservation of mass dictates that ERsoc must be balanced by a decline in the source material which should also lead to a reduced or even negative ERsoc in sediment over time. Besides, the stabilizing effects of structural crust on reducing erosional variation, and the unavoidable variations of erosional response induced by the inherent complexity of interrill erosion, have scarcely been integrated. Moreover, during a prolonged rainfall event surface roughness evolves and affects the movement of eroded aggregates and mineral particles. In this study, two silt loams from Möhlin, Switzerland, organically (OS) and conventionally farmed (CS), were exposed to simulated rainfall of 30 mm h-1 for up to 6 hours. Round donut-flumes with a confined eroding area (1845 cm2) and limited transporting distance (20 cm) were used. Sediments, runoff and subsurface flow were collected in intervals of 30 min. Loose aggregates left on the eroded soil surface, crusts and the soil underneath the crusts were collected after the experiment. All the samples were analyzed for total organic carbon (TOC) content, and texture. Laser scanning of soil surface was applied before and after the rainfall event. The whole experiment was repeated for 10 times. Results from this study showed that: 1) ERsoc in eroded sediment increased at first, then reached steady state and declined afterwards, corresponding well with the formation and completion of structural crust and conservation of mass; 2) the effect of structural crust on stabilizing the surface condition and reducing variation of erosional response was more apparent once steady state discharge was achieved ; and 3) both texture and TOC content in crusts and soil underneath the crusts were comparable to parent soil, explaining the decline in ERsoc. In conclusion, the experiment showed that crusting and conservation of mass lead to a decline and even negative enrichment of organic matter in interrill sediment over time. Enrichment of organic matter should therefore be reported only in conjunction with information about the stage of crust development observed during an erosion event.

Deposition behavior, risk assessment and source identification of heavy metals in reservoir sediments of Northeast China.

PubMed

Zhu, Lin; Liu, Jianwei; Xu, Shiguo; Xie, Zaigang

2017-08-01

Sediment cores from five reservoirs, located in the Liaoning and Jilin Provinces in Northeast China, were collected to investigate the accumulation and potential toxicity of heavy metals (Fe, Mn, Cu, Cd, Pb, Zn, and Cr) during a sampling campaign in February, 2015. The results showed that all the detected metals accumulated significantly, especially Cd, compared to their respective background values. Among these reservoirs, Biliuhe Reservoir had markedly increasing trends for organic matter and all the metals, among which Mn was elevated by 280% to 3411mg/kg in a core of only 18cm in depth. Xinlicheng Reservoir was characterized by heavy siltation and varying metal distribution due to its regular geometric features and pulsed flood events. The Enrichment factor (EF) and geo-accumulation index (I geo ) indicated Cd was strongly enriched by anthropogenic inputs, with the values of EF and I geo greater than 8 and 3, respectively. The toxicity assessment calculated using consensus-based sediment quality guidelines (SQGs) implied the whole cores of Tanghe and Dahuofang and the upper cores of Biliuhe, Xinlicheng and Fengman exhibited toxicity to sediment-dwelling organisms. Cr contributed more to Q m-PEC than the other heavy metals, because only Cr exceeded the probable effect concentration (PEC) despite its low enrichment. According to the results of correlation analysis (CA) and principal components analysis (PCA), mining industries and agricultural activities within the basin were the main anthropogenic pollution sources for these heavy metals. Copyright © 2017 Elsevier Inc. All rights reserved.

Interstitial solutions and diagenesis in deeply buried marine sediments: results from the Deep Sea Drilling Project

USGS Publications Warehouse

Sayles, F.L.; Manheim, F.T.

1975-01-01

Through the Deep Sea Drilling Project samples of interstitial solutions of deeply buried marine sediments throughout the World Ocean have been obtained and analyzed. The studies have shown that in all but the most slowly deposited sediments pore fluids exhibit changes in composition upon burial. These changes can be grouped into a few consistent patterns that facilitate identification of the diagenetic reactions occurring in the sediments. Pelagic clays and slowly deposited (<1 cm/103yr) biogenic sediments are the only types that exhibit little evidence of reaction in the pore waters. In most biogenic sediments sea water undergoes considerable alteration. In sediments deposited at rates up to a few cm/103 yr the changes chiefly involve gains of Ca2+ and Sr2+ and losses of Mg2+ which balance the Ca2+ enrichment. The Ca-Mg substitution may often reach 30 mM/kg while Sr2+ may be enriched 15-fold over sea water. These changes reflect recrystallization of biogenic calcite and the substitution of Mg2+ for Ca2+ during this reaction. The Ca-Mg-carbonate formed is most likely a dolomitic phase. A related but more complex pattern is found in carbonate sediments deposited at somewhat greater rates. Ca2+ and Sr2+ enrichment is again characteristic, but Mg2+ losses exceed Ca2+ gains with the excess being balanced by SO4post staggered2- losses. The data indicate that the reactions are similar to those noted above, except that the Ca2+ released is not kept in solution but is precipitated by the HCO3post staggered- produced in SO4post staggered2- reduction. In both these types of pore waters Na+ is usually conservative, but K+ depletions are frequent. In several partly consolidated sediment sections approaching igneous basement contact, very marked interstitial calcium enrichment has been found (to 5.5 g/kg). These phenomena are marked by pronounced depletion in Na+, Si and CO2, and slight enhancement in Cl-. The changes are attributed to exchange of Na+ for Ca2+ in silicate minerals forming from submarine weathering of igneous rocks such as basalts. Water is also consumed in these reactions, accounting for minor increases in total interstitial salinity. Terrigenous, organic-rich sediments deposited rapidly along continental margins also exhibit significant evidences of alteration. Microbial reactions involving organic matter lead to complete removal of SO4post staggered2-, strong HCO3post staggered- enrichment, formation of NH4post staggered+, and methane synthesis from H2 and CO2 once SO4post staggered2- is eliminated. K+ and often Na+ (slightly) are depleted in the interstitial waters. Ca2+ depletion may occur owing to precipitation of CaCO3. In most cases interstitial Cl- remains relatively constant, but increases are noted over evaporitic strata, and decreases in interstitial Cl- are observed in some sediments adjacent to continents. ?? 1975.

Metabolic Activity and Functional Diversity Changes in Sediment Prokaryotic Communities Organically Enriched with Mussel Biodeposits

PubMed Central

Pollet, Thomas; Cloutier, Olivier; Nozais, Christian; McKindsey, Christopher W.; Archambault, Philippe

2015-01-01

This experimental microcosm study reports the influence of organic enrichments by mussel biodeposits on the metabolic activity and functional diversity of benthic prokaryotic communities. The different biodeposit enrichment regimes created, which mimicked the quantity of faeces and pseudo-faeces potentially deposited below mussel farms, show a clear stimulatory effect of this organic enrichment on prokaryotic metabolic activity. This effect was detected once a certain level of biodeposition was attained with a tipping point estimated between 3.25 and 10 g day-1 m-2. Prokaryotic communities recovered their initial metabolic activity by 11 days after the cessation of biodeposit additions. However, their functional diversity remained greater than prior to the disturbance suggesting that mussel biodeposit enrichment may disturb the functioning and perhaps the role of prokaryotic communities in benthic ecosystems. This manipulative approach provided new information on the influence of mussel biodeposition on benthic prokaryotic communities and dose-response relationships and may support the development of carrying capacity models for bivalve culture. PMID:25923715

Metabolic activity and functional diversity changes in sediment prokaryotic communities organically enriched with mussel biodeposits.

PubMed

Pollet, Thomas; Cloutier, Olivier; Nozais, Christian; McKindsey, Christopher W; Archambault, Philippe

2015-01-01

This experimental microcosm study reports the influence of organic enrichments by mussel biodeposits on the metabolic activity and functional diversity of benthic prokaryotic communities. The different biodeposit enrichment regimes created, which mimicked the quantity of faeces and pseudo-faeces potentially deposited below mussel farms, show a clear stimulatory effect of this organic enrichment on prokaryotic metabolic activity. This effect was detected once a certain level of biodeposition was attained with a tipping point estimated between 3.25 and 10 g day-1 m-2. Prokaryotic communities recovered their initial metabolic activity by 11 days after the cessation of biodeposit additions. However, their functional diversity remained greater than prior to the disturbance suggesting that mussel biodeposit enrichment may disturb the functioning and perhaps the role of prokaryotic communities in benthic ecosystems. This manipulative approach provided new information on the influence of mussel biodeposition on benthic prokaryotic communities and dose-response relationships and may support the development of carrying capacity models for bivalve culture.

Effect of mining and related activities on the sediment trace element geochemistry of Lake Coeur D'Alene, Idaho, USA. Part I: Surface sediments

USGS Publications Warehouse

Horowitz, Arthur J.; Elrick, Kent A.; Cook, Robert B.

1993-01-01

During the summer of 1989 surface sediment samples were collected in Lake Coeur d'Alene, the Coeur d'Alene River and the St Joe River, Idaho, at a density of approximately one sample per square kilometre. Additional samples were collected from the banks of the South Fork of the Coeur d'Alene and the Coeur d'Alene Rivers in 1991. All the samples were collected to determine trace element concentrations, partitioning and distribution patterns, and to relate them to mining, mining related and discharge operations that have occurred in the Coeur d'Alene district since the 1880s, some of which are ongoing.Most of the surface sediments in Lake Coeur d'Alene north of Conkling Point and Carey Bay are substantially enriched in Ag, As, Cu, Cd, Hg, Pb, Sb and Zn relative to unaffected sediments in the southern portion of the lake near the St Joe River. All the trace element enriched sediments are extremely fine grained (mean grain sizes « 63 μm). Most of the enriched trace elements, based on both the chemical analyses of separated heavy and light mineral fractions and a two step sequential extraction procedure, are associated with an operationally defined Fe oxide phase; much smaller percentages are associated either with operationally defined organics/sulphides or refractory phases.The presence, concentration and distribution of the Fe oxides and heavy minerals indicates that a substantial portion of the enriched trace elements are probably coming from the Coeur d'Alene River, which is serving as a point source. Within the lake, this relatively simple point source pattern is complicated by a combination of (1) the formation of trace element rich authigenic Fe oxides that appear to have reprecipitated from material solubilized from anoxic bed sediments and (2) physical remobilization by currents and wind driven waves. The processes that have caused the trace element enrichment in the surface sediments of Lake Coeur d'Alene are likely to continue for the foreseeable future.

Redox effects on the microbial degradation of refractory organic matter in marine sediments

NASA Astrophysics Data System (ADS)

Reimers, Clare E.; Alleau, Yvan; Bauer, James E.; Delaney, Jennifer; Girguis, Peter R.; Schrader, Paul S.; Stecher, Hilmar A.

2013-11-01

Microbially mediated reduction-oxidation (redox) reactions are often invoked as being the mechanisms by which redox state influences the degradation of sedimentary organic matter (OM) in the marine environment. To evaluate the effects of elevated, oscillating and reduced redox potentials on the fate of primarily aged, mineral-adsorbed OM contained in continental shelf sediments, we used microbial fuel cells to control redox state within and around marine sediments, without amending the sediments with reducing or oxidizing substances. We subsequently followed electron fluxes in the redox elevated and redox oscillating treatments, and related sediment chemical, isotopic and bacterial community changes to redox conditions over a 748-day experimental period. The electron fluxes of the elevated and oscillating redox cells were consistent with models of organic carbon (OC) oxidation with time-dependent first-order rate constants declining from 0.023 to 0.005 y-1, in agreement with rate constants derived from typical OC profiles and down core ages of offshore sediments, or from sulfate reduction rate measurements in similar sediments. Moreover, although cumulative electron fluxes were higher in the continuously elevated redox treatment, incremental rates of electron harvesting in the two treatments converged over the 2 year experiment. These similar rates were reflected in chemical indicators of OM metabolism such as dissolved OC and ammonia, and particulate OC concentrations, which were not significantly different among all treatments and controls over the experimental time-scale. In contrast, products of carbonate and opal dissolution and metal mobilization showed greater enrichments in sediments with elevated and oscillating redox states. Microbial community composition in anode biofilms and surrounding sediments was assessed via high-throughput 16S rRNA gene sequencing, and these analyses revealed that the elevated and oscillatory redox treatments led to the enrichment of Deltaproteobacteria on the sediment-hosted anodes over time. Many Deltaproteobacteria are capable of using electrodes as terminal electron acceptors to completely oxidize organic substrates. Notably, Deltaproteobacteria were not measurably enriched in the sediments adjacent to anodes, suggesting that - in these experiments - electron-shuttling bacterial networks did not radiate out away from the electrodes, affecting millimeters or centimeters of sediment. Rather, microbial phylotypes allied to the Clostridia appeared to dominate in the sediment amongst all treatments, and likely played essential roles in converting complex dissolved and particulate sources of OM to simple fermentation products. Thus, we advance that the rate at which fermentation products are generated and migrate to oxidation fronts is what limits the remineralization of OM in many subsurface sediments removed from molecular oxygen. This is a diagenetic scenario that is consistent with the discharging behavior of redox oscillating sediment MFCs. It is also compatible with hypotheses that molecular O2 - and not just the resulting elevated redox potential - may be required to effectively catalyze the degradation of refractory OM. Such decomposition reactions have been suggested to depend on substrate interactions with highly reactive oxygen-containing radicals and/or with specialized extracellular enzymes produced by aerobic prokaryotic or eukaryotic cells.

Anthropogenic impacts on the quality of streambed sediments in the lower Sacramento River watershed, California.

PubMed

Hwang, Hyun-Min; Green, Peter G; Holmes, Robert W

2009-01-01

To investigate the occurrence of contaminants and to assess their toxicity potential to benthic organisms, streambed sediments were collected from three agricultural and one urban influenced small waterways in the lower Sacramento River watershed and analyzed for PAHs, organochlorine (OC) and organophosphorus (OP) pesticides, pyrethroids, and metals. These sites had low benthic biotic index scores in earlier field surveys. The occurrence patterns of these contaminants and iron normalized enrichment factors of metals reflect the land use patterns around study sites. DDTs were detected in all samples while chlordanes were found only at the urban influenced site. No OP pesticides were found in any sediment presumably due to their high water solubilities and low solid-water partitioning. DDTs, PAHs, and metals at sites in the Biggs/West Gridley Canal showed a gradient increasing toward downstream. Distribution patterns of individual PAHs and their ratios found in sediment from the Biggs/West Gridley Canal downstream site resemble those of petroleum. PAHs in this site might originate from petroleum oils that have been used as agricultural pesticides. The enrichment factor of vanadium, which is an indicator of petroleum residue, was also higher in this site. The anthropogenic enrichment of copper at all Biggs/West Gridley Canal sites might be because of significant use of copper based pesticides. The high enrichment factor of lead at the urban influenced Dry Creek site might be related to historical use of leaded gasoline. All sediment samples had at least one chemical that exceed the threshold effects concentration (TEC). Total probable effects concentration quotients (tPECQs) were greater than 1 at all sites, indicating that sediment bound contaminants in the study sites can possibly pose toxic effects. This finding can be linked to lower biotic index scores observed in previous regional monitoring studies.

Marine molluscs in environmental monitoring. III. Trace metals and organic pollutants in animal tissue and sediments

NASA Astrophysics Data System (ADS)

Feldstein, Tamar; Kashman, Yoel; Abelson, Avigdor; Fishelson, Lev; Mokady, Ofer; Bresler, Vladimir; Erel, Yigal

2003-10-01

Concentrations of trace elements and organic pollutants were determined in marine sediments and molluscs from the Mediterranean and Red Sea coasts of Israel. Two bivalve species (Donax trunculus, Pteria aegyptia), two gastropod species (Patella caerulea, Cellana rota) and sediments were sampled at polluted and relatively clean, reference, sites. Along the Mediterranean coast of Israel, sediments and molluscs from Haifa Bay stations were enriched with both organic and trace element contaminants. In the Red Sea, differences between the polluted and reference sites were less pronounced. Bio-concentration factors indicate a significant concentration of Zn, As, Cd, Sn and Pb in animal tissue relative to the concentrations of these elements in the sediments. In contrast, Ce, La and U were not concentrated in molluscs. The trace element results indicate a saturation of the detoxification mechanisms in molluscs from polluted sites. The concentrations of organic pollutants at the same sites are at the lower range of values recorded in other studies. However, synergistic effects between these compounds and between them and metals can lead to acute toxicity.

Groundwater arsenic contamination affecting different geologic domains in India--a review: influence of geological setting, fluvial geomorphology and Quaternary stratigraphy.

PubMed

Acharyya, Subhrangsu K; Shah, Babar A

2007-10-01

Arsenic contamination in groundwater is pervasive within lowland organic-rich Bengal Delta and narrow entrenched channels in the Middle Ganga floodplains. Local areas of Damodar fan-delta and isolated areas within the Dongargarh Proterozoic rift-zone in central India are also contaminated. In this rift-zone, arsenic is enriched in felsic magmatic rocks and weathered rocks and soils from local areas are enriched further in arsenic and iron. Late Quaternary stratigraphy, geomorphology and sedimentation have influenced groundwater arsenic contamination in alluvium that aggraded during the Holocene sea-level rise. No specific source of arsenic could be identified, although Himalaya is the main provenance for the Ganga floodplain and the Bengal Delta. Gondwana coal seams and other Peninsular Indian rocks might be sources for arsenic in the Damodar fan-delta. As-bearing pyrite or any As-mineral is nearly absent in the aquifer sediments. Arsenic mainly occurs adsorbed on hydrated-iron-oxide (HFO), which coat sediment grains and minerals. Arsenic and iron are released to groundwater by bio-mediated reductive dissolution of HFO with corresponding oxidation of organic matter.

Sulphur-cycling bacteria and ciliated protozoans in a Beggiatoaceae mat covering organically enriched sediments beneath a salmon farm in a southern Chilean fjord.

PubMed

Aranda, Carlos P; Valenzuela, Cristian; Matamala, Yessica; Godoy, Félix A; Aranda, Nicol

2015-11-15

The colourless mat covering organically enriched sediments underlying an intensive salmon farm in Estero Pichicolo, southern Chile, was surveyed by combined 454 PyroTag and conventional Sanger sequencing of 16S/18S ribosomal RNA genes for Bacteria and Eukarya. The mat was dominated by the sulphide-oxidizing bacteria (SOB) Candidatus Isobeggiatoa, Candidatus Parabeggiatoa and Arcobacter. By order of their abundances, sulphate-reducing bacteria (SRB) were represented by diverse deltaproteobacterial Desulfobacteraceae, but also within Desulfobulbaceae, Desulfuromonadaceae and Desulfovibrionaceae. The eukaryotic PyroTags were dominated by polychaetes, copepods and nematodes, however, ciliated protozoans were highly abundant in microscopy observations, and were represented by the genera Condylostoma, Loxophyllum and Peritromus. Finally, the abundant Sulfurimonas/Sulfurovum also suggest the occurrence of zero-valence sulphur oxidation, probably derived from Beggiatoaceae as a result of bacteriovorus infaunal activity or generated as free S(0) by the Arcobacter bacteria. The survey suggests an intense and complex sulphur cycle within the surface of salmon-farm impacted sediments. Copyright © 2015 Elsevier Ltd. All rights reserved.

Geochemistry of polycyclic aromatic hydrocarbons in the bottom sediments of the eastern Arctic shelf

NASA Astrophysics Data System (ADS)

Petrova, V. I.; Batova, G. I.; Kursheva, A. V.; Litvinenko, I. V.; Savinov, V. M.; Savinova, T. N.

2008-04-01

Sources and pathways of supply of polycyclic aromatic hydrocarbons (PAH) in the surface sediments of the Laptev and East Siberian seas were identified based on an analysis of the lithological-geochemical characteristics and distribution of organic matter (OM). The distribution of organic carbon, humic acids, bitumoids, and hydrocarbons demonstrates the determining role of the riverine runoff in the formation of the recent sediments. The total average content of PAH in the sediments of this region approximates 37 ng/g, not exceeding 80 ng/g of dry sediment. The biogenic components of the PAH (alkylphenanthrenes, alkylchrysenes, perylene) dominate in the estuarine-shelf and coastal-shelf sediments enriched with plant detritus and significantly decrease in the pelagic zone. The anthropogenic influence is observed in sediments of the port of Tiksi, where the total content of PAH with dominant pyrogenic components is two orders of magnitude higher as compared with the background values in the study region.

Microbial acetogenesis as a source of organic acids in ancient Atlantic Coastal Plain sediments

USGS Publications Warehouse

Chapelle, F.H.; Bradley, P.M.

1996-01-01

Field and laboratory evidence shows that deeply buried (90-888 m) fine-grained sediments of the Atlantic Coastal Plain contain viable acetogenic microorganisms, and that these microorganisms actively produce organic acids. Concentrations of formate, acetate, and propionate in pore waters extracted from fine-grained sediments ranged from 50 ??M to 5 mM and were much higher than in adjacent pore waters associated with sandy sediments (<2 ??M). Laboratory studies showed that asceptically cored fine-grained sediments incubated under a H2 atmosphere produced formate and acetate, and that H14CO-3 was converted to 14C-acetate and 14C-formate over time. An enrichment culture of these acetogenic microorganisms was recovered from one long-term incubation that showed the presence of several morphologically distinct gram-positive, rod-shaped bacteria. These microorganisms were capable of growth under autotrophic (H2 + CO2), heterotrophic (syringate), and mixotrophic (H2 + CO2 + syringate) conditions. These results suggest that microbial acetogenesis, rather than abiotic processes, is the most important organic acid-producing mechanism during low-temperature (???30 ??C) diagenesis of Atlantic Coastal Plain sediments.

Trace elements and polycyclic aromatic hydrocarbons (PAHs) concentrations in deep Gulf of Mexico sediments

NASA Astrophysics Data System (ADS)

Wade, Terry L.; Soliman, Yousra; Sweet, Stephen T.; Wolff, Gary A.; Presley, Bobby J.

2008-12-01

The concentrations of polycyclic aromatic hydrocarbons (PAHs) and trace elements were determined for surface (top 2 cm) sediment samples collected during the deep Gulf of Mexico benthos (DGoMB) study .These elements and compounds are known to be toxic to organisms at high concentrations and may affect biological communities. There is no indication of major anthropogenic input of the elements Be, Co, Cr, Fe, Si, Tl, V, K, Mg, Ca, Sr and Zn, based on normalization to Al. The concentrations of these metals in the sediment are a function of the relative amounts of trace-metal-rich Mississippi River-derived silicate material and trace-metal-poor plankton-derived carbonate. This is not true for the elements Ba, Ni, Pb, Cd, As, Cu and Mn, whose concentrations show considerable scatter when normalized to Al and a general enrichment. On a normalized basis, Mn is enriched 5-10 fold, Cu and Ni 2-3 fold and Pb 2 fold over Mississippi River-derived material. These enrichments are likely the result of remobilization of metals from depths in the sediment column where reducing conditions exist. The Ba concentrations at selected sites are higher than those of average clay-rich sediments, but are typical of sediments from near oil well platforms in the northern Gulf of Mexico. In the case of Ba, it seems likely that the enrichments, as high as a factor of 10, are due to disposal of oil well drilling mud. The Ba-enriched samples are from the three shallowest water sites in the Mississippi Trough (sites MT1, 2 and 3) and from site C1 and WC5. All are in an area of intense petroleum exploration and development. PAH concentrations are also elevated at MT1, MT3 and C1. The total PAH concentration ranged from not detected (ND) to 1033 ng/g with a mean of 140 ng/g. Even at the sites most enriched in PAHs and trace elements, the concentrations are not at the levels expected to adversely affect the biota. However, these predicted non-effects are based on research using mostly near-shore estuarine species, not on the indigenous species at the sampling sites.

Mangrove growth in New Zealand estuaries: the role of nutrient enrichment at sites with contrasting rates of sedimentation.

PubMed

Lovelock, Catherine E; Feller, Ilka C; Ellis, Joanne; Schwarz, Ann Maree; Hancock, Nicole; Nichols, Pip; Sorrell, Brian

2007-09-01

Mangrove forest coverage is increasing in the estuaries of the North Island of New Zealand, causing changes in estuarine ecosystem structure and function. Sedimentation and associated nutrient enrichment have been proposed to be factors leading to increases in mangrove cover, but the relative importance of each of these factors is unknown. We conducted a fertilization study in estuaries with different sedimentation histories in order to determine the role of nutrient enrichment in stimulating mangrove growth and forest development. We expected that if mangroves were nutrient-limited, nutrient enrichment would lead to increases in mangrove growth and forest structure and that nutrient enrichment of trees in our site with low sedimentation would give rise to trees and sediments that converged in terms of functional characteristics on control sites in our high sedimentation site. The effects of fertilizing with nitrogen (N) varied among sites and across the intertidal zone, with enhancements in growth, photosynthetic carbon gain, N resorption prior to leaf senescence and the leaf area index of canopies being significantly greater at the high sedimentation sites than at the low sedimentation sites, and in landward dwarf trees compared to seaward fringing trees. Sediment respiration (CO(2) efflux) was higher at the high sedimentation site than at the low one sedimentation site, but it was not significantly affected by fertilization, suggesting that the high sedimentation site supported greater bacterial mineralization of sediment carbon. Nutrient enrichment of the coastal zone has a role in facilitating the expansion of mangroves in estuaries of the North Island of New Zealand, but this effect is secondary to that of sedimentation, which increases habitat area and stimulates growth. In estuaries with high sediment loads, enrichment with N will cause greater mangrove growth and further changes in ecosystem function.

Application of the positive matrix factorization approach to identify heavy metal sources in sediments. A case study on the Mexican Pacific Coast.

PubMed

González-Macías, C; Sánchez-Reyna, G; Salazar-Coria, L; Schifter, I

2014-01-01

During the last two decades, sediments collected in different sources of water bodies of the Tehuantepec Basin, located in the southeast of the Mexican Pacific Coast, showed that concentrations of heavy metals may pose a risk to the environment and human health. The extractable organic matter, geoaccumulation index, and enrichment factors were quantified for arsenic, cadmium, copper, chromium, nickel, lead, vanadium, zinc, and the fine-grained sediment fraction. The non-parametric SiZer method was applied to assess the statistical significance of the reconstructed metal variation along time. This inference method appears to be particularly natural and well suited to temperature and other environmental reconstructions. In this approach, a collection of smooth of the reconstructed metal concentrations is considered simultaneously, and inferences about the significance of the metal trends can be made with respect to time. Hence, the database represents a consolidated set of available and validated water and sediment data of an urban industrialized area, which is very useful as case study site. The positive matrix factorization approach was used in identification and source apportionment of the anthropogenic heavy metals in the sediments. Regionally, metals and organic matter are depleted relative to crustal abundance in a range of 45-55 %, while there is an inorganic enrichment from lithogenous/anthropogenic sources of around 40 %. Only extractable organic matter, Pb, As, and Cd can be related with non-crustal sources, suggesting that additional input cannot be explained by local runoff or erosion processes.

Distribution and accumulation of mercury and copper in mangrove sediments in Shenzhen, the world's most rapid urbanized city.

PubMed

Li, Ruili; Xu, Hualin; Chai, Minwei; Qiu, Guo Yu

2016-02-01

To investigate the influence of mangrove forest on heavy metal accumulation and storage in intertidal sediments, core sediments from natural mangrove, restored mangrove, and adjacent mud flat spanning the intertidal zone along the south coastline of the most heavily urbanized Deep bay, Guangdong province, China were analyzed. The average concentrations of mercury (Hg) in surface sediments of natural mangrove and restored mangrove were 172 and 151 ng g(-1), whereas those of copper (Cu) were 75 and 50 μg g(-1), respectively. Compared to those from other typical mangrove wetlands of the world, the metal levels in Shenzhen were at median to high levels, which is consistent with the fact that Shenzhen is in high exploitation and its mangrove suffer intensive impact from human activities. Hg and Cu concentration profiles indicated a higher metal accumulation in surface layers of sediments, in agreement with enrichment of organic matter contents. Maximum concentration, enrichment factors, and excess (background-deducted) concentration inventories of metals (Hg and Cu) were substantially different between environments, decreasing from natural mangrove sediments to restored mangrove sediments to mud flat. Furthermore, metal inputs to Futian mangrove decreased in the order natural mangrove > restored mangrove > mud flat, indicating that mangrove facilitated the accumulation and storage of Hg and Cu in sediment layers.

Pre-treatments, characteristics, and biogeochemical dynamics of dissolved organic matter in sediments: A review.

PubMed

Chen, Meilian; Hur, Jin

2015-08-01

Dissolved organic matter (DOM) in sediments, termed here sediment DOM, plays a variety of important roles in global biogeochemical cycling of carbon and nutrients as well as in the fate and transport of xenobiotics. Here we reviewed sediment DOM, including pore waters and water extractable organic matter from inland and coastal sediments, based on recent literature (from 1996 to 2014). Sampling, pre-treatment, and characterization methods for sediment DOM were summarized. The characteristics of sediment DOM have been compared along an inland to coastal ecosystems gradient and also with the overlying DOM in water column to distinguish the unique nature of it. Dissolved organic carbon (DOC) from inland sediment DOM was generally higher than coastal areas, while no notable differences were found for their aromaticity and apparent molecular weight. Fluorescence index (FI) revealed that mixed sources are dominant for inland sediment DOM, but marine end-member prevails for coastal sediment DOM. Many reports showed that sediments operate as a net source of DOC and chromophoric DOM (CDOM) to the water column. Sediment DOM has shown more enrichment of nitrogen- and sulfur-containing compounds in the elemental signature than the overlying DOM. Fluorescent fingerprint investigated by excitation-emission matrix coupled with parallel factor analysis (EEM-PARAFAC) further demonstrated the characteristics of sediment DOM lacking in the photo-oxidized and the intermediate components, which are typically present in the overlying surface water. In addition, the biogeochemical changes in sediment DOM and the subsequent environmental implications were discussed with the focus on the binding and the complexation properties with pollutants. Copyright © 2015 Elsevier Ltd. All rights reserved.

Comparative organic geochemistry of Indian margin (Arabian Sea) sediments: estuary to continental slope

NASA Astrophysics Data System (ADS)

Cowie, G.; Mowbray, S.; Kurian, S.; Sarkar, A.; White, C.; Anderson, A.; Vergnaud, B.; Johnstone, G.; Brear, S.; Woulds, C.; Naqvi, S. W.; Kitazato, H.

2014-02-01

Surface sediments from sites across the Indian margin of the Arabian Sea were analysed for their carbon and nitrogen compositions (elemental and stable isotopic), grain size distributions and biochemical indices of organic matter (OM) source and/or degradation state. Site locations ranged from the estuaries of the Mandovi and Zuari rivers to depths of ~ 2000 m on the continental slope, thus spanning nearshore muds and sands on the shelf and both the semi-permanent oxygen minimum zone (OMZ) on the upper slope (~ 200-1300 m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, and overwhelming predominance (80%+) of marine OM on the shelf and slope. Thus, riverine OM is heavily diluted by autochthonous marine OM and/or is efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from < 0.5 wt % in relict shelf sands to over 7 wt % at slope sites within the OMZ, decreasing to ≤ 1 wt % at 2000 m. Major variability (~ 5 wt %) was found at slope sites within the OMZ of similar depth and near-identical bottom-water oxygen concentration. A strong relationship between organic C and sediment grain size was seen for sediments within the OMZ, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, the results indicate that OM enrichment on the upper slope can be explained by physical controls (winnowing and/or dilution) on the shelf and progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to OM enrichment at some sites within the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution.

Bioaccumulation of metals in fish species from water and sediments in macrotidal Ennore creek, Chennai, SE coast of India: A metropolitan city effect.

PubMed

Jayaprakash, M; Kumar, R Senthil; Giridharan, L; Sujitha, S B; Sarkar, S K; Jonathan, M P

2015-10-01

Accumulation of trace metals (Fe, Mn, Cr, Cu, Ni, Co, Pb, Zn, Cd) were investigated in water, sediment (n=20) along with six fish of diverse feeding guilds (Sillago sihama, Liza parsia, Etroplus suratensis, Oreochromis mossambicus, Arius parkii and Gerres oyena) from the Ennore creek, northern part of Chennai metropolitan megacity, southeast coast of India. Dissolved trace metals (DTMs) in surface water samples and total trace metals (TTMs) in surface sediments (top 0-10cm) indicate that concentration pattern of metals was higher in the discharge point of the river/channels entering the main creek. The maximum mean values of DTMs exhibited the following decreasing order (expressed in µg/L): Fe (1698)>Mn (24)>Zn (14.50)>Pb (13.89)>Ni (6.73)>Cu (3.53)>Co (3.04)>Cr (2.01) whereas the trend is somewhat different in sediments (µgg(-1)): Fe (4300)>Mn (640)>Cr (383)>Zn (155)>Cu (102)>Ni (35)>Pb (32)>Cd (0.51) are mainly due to the industrial complexes right on the banks of the river/channels. Species-specific heterogeneous patterns of tissue metal loads were apparent and the overall metal enrichment exhibited the following decreasing order (expressed in µgg(-1)): Cu (7.33)>Fe (6.53)>Zn (4.91)>Cr (1.67)>Pb (1.33)>Ni (0.44)>Mn (0.43)>Co (0.36)>Cd (0.11). This indicates that metals are absorbed onto the different organs, which is also endorsed by the calculated values of bioaccumulation factor (BAFs) (avg. muscle 117, gill 126, liver 123, intestine 118) in fishes. The high calculated biota sediment accumulation factor (BSAF) (0.437) for the species Arius parkii is considered to be a potential bioindicator in this region. The enrichment of trace metals is also supported by the association of metals in water, sediments and different body organs (muscle, gill, liver, intestine) of fish samples. Comparative studies with other coastal regions indicate considerable enrichment of DTMs & TTMs in sediments as well as in various organs of fish samples. Holistic spatial, temporal monitoring and comprehensive regional strategies are required to prevent health risks and ensure nutritional safety conditions. Copyright © 2015 Elsevier Inc. All rights reserved.

Alteration of organic matter during infaunal polychaete gut passage and links to sediment organic geochemistry. Part I: Amino acids

NASA Astrophysics Data System (ADS)

Woulds, Clare; Middelburg, Jack J.; Cowie, Greg L.

2012-01-01

Of the factors which control the quantity and composition of organic matter (OM) buried in marine sediments, the links between infaunal ingestion and gut passage and sediment geochemistry have received relatively little attention. This study aimed to use feeding experiments and novel isotope tracing techniques to quantify amino acid net accumulation and loss during polychaete gut passage, and to link this to patterns of selective preservation and decay in sediments. Microcosms containing either Arenicolamarina or Hediste (formerly Nereis) diversicolor were constructed from defaunated sediment and filtered estuarine water, and maintained under natural temperature and light conditions. They were fed with 13C-labelled diatoms daily for 8 days, and animals were transferred into fresh, un-labelled sediment after ∼20 days. Samples of fauna, microcosm sediment and faecal matter were collected after 8, ∼20 and ∼40 days, and analysed for their bulk isotopic signatures and 13C-labelled amino acid compositions. Bulk isotopic data showed that, consistent with their feeding modes, Hediste assimilated added 13C more quickly, and attained a higher labelling level than Arenicola. Both species retained the added 13C in their biomass even after removal from the food. A principal component analysis of 13C-labelled amino acid mole percentages showed clear differences in composition between the algae, faunal tissues, and sediment plus faecal matter. Further, the two species of polychaete showed different compositions in their tissues. The amino acids phenylalanine, valine, leucine, iso-leucine, threonine and proline showed net accumulation in polychaete tissues. Serine, methionine, lysine, aspartic and glutamic acids and tyrosine were rapidly lost through metabolism, consistent with their presence in easily digestible cell components (as opposed to cell walls which offer physical protection). All sample types (polychaete tissues, sediments and faecal matter) were enriched in labelled glycine. Possible mechanisms for this enrichment include accumulation through inclusion in tissues with long residence times, preferential preservation (i.e. selection against) during metabolism, production from other labelled amino acids during varied metabolic processes, and accumulation in refractory by-products of secondary bacterial production. Overall, similarities were observed between amino-acid decay patterns in faunated microcosms, afaunal controls, and those previously reported in marine sediments. Thus, while polychaete gut passage did produce compound-selective accumulation and losses of certain amino acids in polychaete tissues and faecal matter, the impact of polychaete gut passage on sediment organic geochemistry was difficult to deconvolve from microbial decay. Despite processing large volumes of organic matter, polychaetes may not have distinctive influence on sediment compositions, possibly because metabolic processes concerning amino acids may be broadly similar across a wide range of organisms.

Persistent organic pollutants associated to water fluxes and sedimentary processes in the Colorado River delta, Baja California, México.

PubMed

Lugo-Ibarra, K C; Daesslé, L W; Macías-Zamora, J V; Ramírez-Álvarez, N

2011-09-01

Polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs) were studied in sediment cores from two distinctive modern channels of the Colorado River (CR) delta. Their abundance and temporal changes are associated with flood-flows from the CR across the USA-Mexico border. The CR channel is directly exposed to river flood-flows while the Hardy River (HR) is a local channel derived mainly from agricultural runoff, geothermal effluents, and treated urban wastewater. Different headwater compositions and degrees of exposure to flood-flows appear to be the factors controlling the composition of persistent organic pollutants (POPs). Enrichment of OCPs (46 ng g(-1) dwt in HR and 4.37 ng g(-1) dwt in CR) occurred during or a few years after flooding. PCB-138 (4.2 ng g(-1)dwt) is enriched in HR suggesting its origin in dielectric oils from the geothermal power plant. PCB-28 (2.1 ng g(-1)dwt) in CR may be related with atmospheric input and/or re-deposition of upstream sediments. In surficial sediments (0-3 cm), only HR exceeds international sediment quality guidelines (4,4'-DDE=8.16 ng g(-1)dwt and ΣDDT=8.34 ng g(-1)dwt). Copyright © 2011 Elsevier Ltd. All rights reserved.

Discriminating between natural and anthropogenic features of the sedimentary record in the coastal Beaufort Sea

NASA Astrophysics Data System (ADS)

Trefry, J. H.; Trocine, R. P.; Fox, A. L.; Fox, S. L.; Durell, G.; Kasper, J.

2016-02-01

The coastal Beaufort Sea is at a crossroads with respect to the impacts of human activities. Accurate discrimination of regional and global anthropogenic impacts, versus those due to natural physical and biogeochemical processes, is an important tool for managing environmental issues in the Arctic. We have investigated several natural and anthropogenic features in age-dated sediment cores from the coastal Beaufort Sea. For example, Hg enrichment (by 20 to >50% or +20 to 40 ng/g) was identified in some surface sediments using Hg/Al ratios in cores from nearshore, outer shelf and slope environments. Nearshore Hg anomalies, although quite limited in number, have been linked to drilling fluids deposited during oil and gas exploration in the 1980s. In contrast, similar offshore Hg anomalies are likely due to natural sediment diagenesis as previously noted by others in the deeper Arctic Ocean. We also found Ba enrichment in surface sediments that can be best explained by the deposition of natural, Ba-rich suspended particles from the Colville River; yet, Ba enrichment can sometimes be explained by the presence of drilling fluids in sediments near historic drilling sites. Human induced diagenetic changes are likely to follow current increases in river runoff and coastal erosion. Higher deposition rates for sediment and organic carbon in the coastal Beaufort Sea may create future anomalies for As, Cd and other metals. For example, metal anomalies can presently be found in older subsurface sediments where a layer of carbon-rich sediment was previously deposited. Correct identification of natural versus anthropogenic forcing factors that lead to distinct diagenetic features in the sedimentary record will help us to identify problem areas and make informed regulatory decisions.

Organic-rich sediments in ventilated deep-sea environments: Relationship to climate, sea level, and trophic changes

NASA Astrophysics Data System (ADS)

Bertrand, P.; Pedersen, T. F.; Schneider, R.; Shimmield, G.; Lallier-Verges, E.; Disnar, J. R.; Massias, D.; Villanueva, J.; Tribovillard, N.; Huc, A. Y.; Giraud, X.; Pierre, C.; VéNec-Peyré, M.-T.

2003-02-01

Sediments on the Namibian Margin in the SE Atlantic between water depths of ˜1000 and ˜3600 m are highly enriched in hydrocarbon-prone organic matter. Such sedimentation has occurred for more than 2 million years and is geographically distributed over hundreds of kilometers along the margin, so that the sediments of this region contain a huge concentrated stock of organic carbon. It is shown here that most of the variability in organic content is due to relative dilution by buried carbonates. This reflects both export productivity and diagenetic dissolution, not differences in either water column or bottom water anoxia and related enhanced preservation of organic matter. These observations offer a new mechanism for the formation of potential source rocks in a well-ventilated open ocean, in this case the South Atlantic. The organic richness is discussed in terms of a suite of probable controls including local wind-driven productivity (upwelling), trophic conditions, transfer efficiency, diagenetic processes, and climate-related sea level and deep circulation. The probability of past occurrences of such organic-rich facies in equivalent oceanographic settings at the edge of large oceanic basins should be carefully considered in deep offshore exploration.

Early diagenesis and organic matter preservation--A molecular stable isotope perspective

DOE Office of Scientific and Technical Information (OSTI.GOV)

Macko, S.A.; Engel, M.H.; Qian, Y.

1992-01-01

Through new developments in stable isotope capability, gas chromatography coupled to a stable isotope ratio mass spectrometer (GC/IRMS), the molecular pathways of the diagenetic reactions can be observed on the components themselves. The authors report the results of laboratory-controlled degradation experiments of fresh organic substrates. Isotopically resolvable materials were used. Seagrass showed slight enrichments in [delta]N-15 with little change in [delta]C-13 following four weeks of decomposition. During that period the identifiable amino acid content decreased by approx. 50% for each amino acid. Mixtures of marine sediment with the same seagrass showed enrichments in nitrogen with associated depletions in carbon isotopicmore » compositions over the same time span. Control experiments on the sediments without added fresh seagrass showed no change in isotopic content. These changes are attributed to hydrolysis, deamination and decarboxylation reactions. Isotopic fractionations of similar size and direction have been observed in laboratory studies on peptide hydrolysis and natural samples of particulate organic materials. At the molecular level, using GC/IRMS, certain amino acids are seen to decrease in C-13 content while others become increasingly enriched in C-13. Similar reactions are seen in carbohydrates. The molecular isotope approach indicates that the process of diagenesis and preservation is significantly more complex than simple breakdown and loss. A large portion of the organic matter eventually preserved in organic-rich deposits can be attributed to new production in the deposit.« less

Trace element storage capacity of sediments in dead Posidonia oceanica mat from a chronically contaminated marine ecosystem.

PubMed

Di Leonardo, Rossella; Mazzola, Antonio; Cundy, Andrew B; Tramati, Cecilia Doriana; Vizzini, Salvatrice

2017-01-01

Posidonia oceanica mat is considered a long-term bioindicator of contamination. Storage and sequestration of trace elements and organic carbon (C org ) were assessed in dead P. oceanica mat and bare sediments from a highly polluted coastal marine area (Augusta Bay, central Mediterranean). Sediment elemental composition and sources of organic matter have been altered since the 1950s. Dead P. oceanica mat displayed a greater ability to bury and store trace elements and C org than nearby bare sediments, acting as a long-term contaminant sink over the past 120 yr. Trace elements, probably associated with the mineral fraction, were stabilized and trapped despite die-off of the overlying P. oceanica meadow. Mat deposits registered historic contamination phases well, confirming their role as natural archives for recording trace element trends in marine coastal environments. This sediment typology is enriched with seagrass-derived refractory organic matter, which acts mainly as a diluent of trace elements. Bare sediments showed evidence of inwash of contaminated sediments via reworking; more rapid and irregular sediment accumulation; and, because of the high proportions of labile organic matter, a greater capacity to store trace elements. Through different processes, both sediment typologies represent a repository for chemicals and may pose a risk to the marine ecosystem as a secondary source of contaminants in the case of sediment dredging or erosion. Environ Toxicol Chem 2017;36:49-58. © 2016 SETAC. © 2016 SETAC.

Vertical accumulation of potential toxic elements in a semiarid system that is influenced by an abandoned gold mine

NASA Astrophysics Data System (ADS)

Sánchez-Martínez, Martha A.; Marmolejo-Rodríguez, Ana J.; Magallanes-Ordóñez, Víctor R.; Sánchez-González, Alberto

2013-09-01

The mining zone at El Triunfo, Baja California Sur, Mexico, was exploited for gold extraction for 200 years. This area includes more than 100 abandoned mining sites. These sites contain mine tailings that are highly contaminated with potential toxic elements (PTE), such as As, Cd, Pb, Sb, Zn, and other associated elements. Over time, these wastes have contaminated the sediments in the adjacent fluvial systems. Our aim was to assess the vertical PTE variations in the abandoned mining zone and in the discharge of the main arroyo into a small lagoon at the Pacific Ocean. Sediments were collected from the two following locations in the mining zone near the arroyo basin tailings: 1) an old alluvial terrace (Overbank) and a test pit (TP) and 2) two sediment cores locations at the arroyo discharge into a hypersaline small lagoon. Samples were analyzed by ICP-MS, ICP-OES, and INAA and the methods were validated. The overbank was the most contaminated and had As, Cd, Pb, Sb, and Zn concentrations of 8690, 226, 84,700, 17,400, and 42,600 mg kg-1, respectively, which decreased with depth. In addition, the TP contained elevated As, Cd, Pb, Sb, and Zn concentrations of 694, 18.8, 5001, 39.2, and 4170 mg kg-1, respectively. The sediment cores were less contaminated. However, the As, Cd, Pb, Sb, and Zn concentrations were greater than the concentrations that are generally found in the Earth's crust. The normalized enrichment factors (NEFs), which were calculated from the background concentrations of these elements in the system, showed that extremely severe As, Cd, Pb, Sb, and Zn (NEF > 50) enrichment occurred at the overbank. The TP was severe to very severely enriched with As, Cd, Pb, Sb, and Zn (NEF = 10-50). The sediment cores had a severe enrichment of As, Pb, and Zn (NEF = 10-25). Their vertical profiles showed that anthropogenic influences occurred in the historic sediment deposition at the overbank and TP and in the sediment cores. In addition, the As, Pb, and Zn concentrations in the sediment cores were related to the deposition of fine sediments and organic carbon.

The role of bacteria in the nutrient exchange between sediment and water in a flow-through system.

PubMed

Kairesalo, T; Tuominen, L; Hartikainen, H; Rankinen, K

1995-03-01

The contribution of bacteria to phosphorus (P) and nitrogen (N ) release from, or retention in, sediment was studied in a flow-through system. "Live" and formaldehyde-"killed" sediment communities were incubated in 25-liter bottles with a continuous flow of P- or P + N-enriched water. Sediment bacteria in the killed communities were inhibited by adding formaldehyde (final concentration 0.04% v/v) to the sediment before the start of the experiment. Bacterial activity in the live sediments measured with [(3)H]thymidine and [(14)C]leucine incorporation techniques did not change essentially during the experiment period (7-8 days). Chemical mechanisms were found to be of principal importance in PO4-P retention in the sediment. In the live samples, the net retention of PO4-P was lower than in the killed samples, which was likely due to the reduced O2 conditions in the sediment as a consequence of bacterial mineralization. In total P exchange, however, bacteria increased the retention rate by recycling dissolved organic P in the sediment. In the live communities the retention of N was very efficient, and all the introduced NH4 -N and NO3-N was immobilized by sediment bacteria. Nitrogen enrichment, however, did not alter the P exchange rates. The gradual emergence of bacterial activity (and grazing) in the killed communities, subsequent to the dilution of formaldehyde concentration, enhanced the release of PO4-P and NH4-N from sediment.

Effects of nutrient enrichment derived from fish farming activities on macroinvertebrate assemblages in a subtropical region of Hong Kong.

PubMed

Gao, Qin-Feng; Cheung, Kwok-Leung; Cheung, Siu-Gin; Shin, Paul K S

2005-01-01

To study the correlation between nutrient enrichment derived from fish farming activities and changes in macrobenthic assemblages, a one-year field study was conducted in Kau Sai Bay marine fish culture zone of Hong Kong. Bimonthly sediment samples were collected at six stations: two at the fish cages, two near the boundary of the fish culture area, and two reference sites further away from the culture area. Sediment physico-chemical characteristics in terms of silt/clay fraction, moisture content, total organic carbon (TOC), total Kjeldahl nitrogen (TKN) and total phosphorus (TP) were analyzed. The macrobenthos (>0.5 mm) present in the sediment were sorted, identified and enumerated. On average, TOC, TKN and TP levels at the fish cage stations were 82.8%, 128.5% and 1315.7% higher than those at the reference stations, respectively. As a result, the N:P molar ratio was greatly reduced from 8.75 at the reference stations to 1.83 at the fish cage stations. Univariate and multivariate analyses revealed that diversity of macrofauna was significantly reduced and community structure differed at the fish cage stations relative to the reference sites. The intermediary stations near the fish culture area showed a transitional state of disturbance. Faunal diversity was negatively correlated with nutrient level, reflecting the adverse impacts of nutrient enrichment derived from fish farming activities on the benthic assemblages. Whilst in subtropical Asia-Pacific trash fish is the major feed for fish culture resulting in a higher nutrient loading and nutrient ratio accumulated in the sediment beneath the fish rafts, the effects of nutrient enrichment on macrobenthic assemblages are comparable to that in temperate waters owing to relatively high sediment metabolism rate and smaller fish culture scale in Hong Kong.

Stable isotope tracing of trout hatchery carbon to sediments and foodwebs of limestone spring creeks.

PubMed

Hurd, Todd M; Jesic, Slaven; Jerin, Jessica L; Fuller, Nathan W; Miller, David

2008-11-01

Limestone springs support productive ecosystems and fisheries, yet aquaculture may modify or impair these ecosystems. We determined trout hatchery organic contribution to spring creek sediments and foodwebs with natural abundance stable isotope methods. Hatchery feed, waste, and trout were significantly enriched in delta(13)C relative to autotrophs and wild fish. Spring creek sediments were enriched in delta(13)C toward the hatchery endmember relative to reference streams without hatcheries and relative to a larger larger-order, spring-influenced stream. Contribution of hatchery C to spring creek sediments was greatest during March and associated with greatest sediment %C. Contribution of hatchery C to pollution-tolerant isopod diet was 39-51% in a stream receiving limestone spring water via hatchery effluent. Isopods of one spring creek also relied on hatchery-derived C within one month of hatchery closure. Four years later, less pollution pollution-tolerant amphipods dominated and consumed non-vascular over vascular autotrophs (86%). Isopods of a second spring creek with an active hatchery did not appear to be using hatchery matter directly, but were enriched in delta(34)S relative to a spring creek tributary with no hatchery influence. Isopods in both of these streams were relatively enriched in delta(15)N, indicating general nutrient enrichment from surrounding agricultural land use. The contribution of hatchery vs. wild fish in diet of herons and egrets was traced with delta(13)C of guano. These birds were strongly dependent on stocked trout in a spring creek with a recently closed state trout hatchery, and also near another large, state-run hatchery. Heron dependence on hatchery fish in the spring creek decreased with time since hatchery closure. Use of stable isotope natural abundance techniques in karst spring creeks can reveal stream impairment due to aquaculture, specific C sources to bio-indicating consumers, losses of farmed fish to predation, and potential exposure of higher order consumers to contaminants associated with aquaculture.

Sediment biomarker, bacterial community characterization of high arsenic aquifers in Jianghan Plain, China

PubMed Central

Ye, Hengpeng; Yang, Zeyu; Wu, Xiang; Wang, Jingwen; Du, Dongyun; Cai, Jian; Lv, Kangle; Chen, Huiyun; Mei, Jingkun; Chen, Mengqi; Du, Hong

2017-01-01

Representative biomarkers (e.g., n-alkanes), diversity and microbial community in the aquifers contaminated by high concentration of arsenic (As) in different sediment depth (0–30 m) in Jianghan Plain, Hubei, China, were analyzed to investigate the potential mechanism of As enrichment in groundwater. The concentration of As was abundant in top soil and sand, but not in clay. The analysis of the distribution of n-alkanes, CPI values, and wax to total n-alkane ratio (Wax(n)%) indicated that the organic matter (OM) from fresh terrestrial plants were abundant in the shallow sediment. However, n-alkanes have suffered from significant biodegradation from the depth of 16 m to 30 m. The deposition of fresh terrestrial derived organic matters may facilitate the release of As from sediment to groundwater in the sediment of 0–16 m. However, the petroleum derived organic matters may do the favor to the release of As in the deeper section of borehole (16 m to 30 m). The 16S rRNA gene sequences identification indicated that Acidobacteria, Actinomycetes and Hydrogenophaga are abundant in the sediments with high arsenic. Therefore, microbes and organic matters from different sources may play important roles in arsenic mobilization in the aquifers of the study area. PMID:28165031

CO2 leakage from carbon dioxide capture and storage (CCS) systems affects organic matter cycling in surface marine sediments.

PubMed

Rastelli, Eugenio; Corinaldesi, Cinzia; Dell'Anno, Antonio; Amaro, Teresa; Greco, Silvestro; Lo Martire, Marco; Carugati, Laura; Queirós, Ana M; Widdicombe, Stephen; Danovaro, Roberto

2016-12-01

Carbon dioxide capture and storage (CCS), involving the injection of CO 2 into the sub-seabed, is being promoted worldwide as a feasible option for reducing the anthropogenic CO 2 emissions into the atmosphere. However, the effects on the marine ecosystems of potential CO 2 leakages originating from these storage sites have only recently received scientific attention, and little information is available on the possible impacts of the resulting CO 2 -enriched seawater plumes on the surrounding benthic ecosystem. In the present study, we conducted a 20-weeks mesocosm experiment exposing coastal sediments to CO 2 -enriched seawater (at 5000 or 20,000 ppm), to test the effects on the microbial enzymatic activities responsible for the decomposition and turnover of the sedimentary organic matter in surface sediments down to 15 cm depth. Our results indicate that the exposure to high-CO 2 concentrations reduced significantly the enzymatic activities in the top 5 cm of sediments, but had no effects on subsurface sediment horizons (from 5 to 15 cm depth). In the surface sediments, both 5000 and 20,000 ppm CO 2 treatments determined a progressive decrease over time in the protein degradation (up to 80%). Conversely, the degradation rates of carbohydrates and organic phosphorous remained unaltered in the first 2 weeks, but decreased significantly (up to 50%) in the longer term when exposed at 20,000 ppm of CO 2 . Such effects were associated with a significant change in the composition of the biopolymeric carbon (due to the accumulation of proteins over time in sediments exposed to high-pCO 2 treatments), and a significant decrease (∼20-50% at 5000 and 20,000 ppm respectively) in nitrogen regeneration. We conclude that in areas immediately surrounding an active and long-lasting leak of CO 2 from CCS reservoirs, organic matter cycling would be significantly impacted in the surface sediment layers. The evidence of negligible impacts on the deeper sediments should be considered with caution and further investigated simulating the intrusion of CO 2 from a subsurface source, as occurring during real CO 2 leakages from CCS sites. Copyright © 2016 Elsevier Ltd. All rights reserved.

Desulfofrigus sp. prevails in sulfate-reducing dilution cultures from sediments of the Benguela upwelling area.

PubMed

Kraft, Beate; Engelen, Bert; Goldhammer, Tobias; Lin, Yu-Shih; Cypionka, Heribert; Könneke, Martin

2013-04-01

Sediments of coastal upwelling areas are generally characterized by a high content of organic carbon that is mainly degraded via anaerobic microbial processes including sulfate reduction as a major terminal oxidation step. Despite the high importance of sulfate reduction in these sediments, the identity of sulfate-reducing bacteria (SRB) has remained almost unknown. Here, we applied a cultivation-based approach using selective enrichment conditions to study the diversity and distribution of active SRB in sediments along a transect perpendicular to the continental slope off the coast of Namibia (Meteor-cruise M76/1). To promote growth of the most abundant SRB, dilution series were prepared and amended with hydrogen, acetate, or a mixture of monomers representing typical substrates for SRB. Growth of SRB could be detected in the presence of all electron donors and from sediment down to 4 m depth. 16S rRNA gene-based DGGE analysis and sequencing revealed the predominance of SRB related to psychrophiles in particular to the genus Desulfofrigus, which made up 1 % of the total microbial community, accounting for an absolute abundance of up to 4.8 × 10(7)  cells mL(-1) . In general, the abundance of cultured SRB changed with depth and between the different sampling sites and correlated with the content of organic carbon as previously reported. Growth of chemolithotrophic SRB in relatively high dilution steps and the enrichment of methanogens as well as acetogens from deeper sediment point to a competition between hydrogen-utilizing microbial processes and their biogeochemical significance in deep sediment layers of the Benguela upwelling area. © 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Heavy metal distributions in Peru Basin surface sediments in relation to historic, present and disturbed redox environments

NASA Astrophysics Data System (ADS)

Koschinsky, Andrea

Heavy metal distributions in deep-sea surface sediments and pore water profiles from five areas in the Peru Basin were investigated with respect to the redox environment and diagenetic processes in these areas. The 10-20-cm-thick Mn oxide-rich and minor metal-rich top layer is underlain by an increase in dissolved Mn and Ni concentrations resulting from the reduction of the MnO 2 phase below the oxic zone. The mobilised associated metals like Co, Zn and Cu are partly immobilised by sorption on clay, organic or Fe compounds in the post-oxic environment. Enrichment of dissolved Cu, Zn, Ni, Co, Pb, Cd, Fe and V within the upper 1-5 cm of the oxic zone can be attributed to the degradation of organic matter. In a core from one area at around 22-25 cm depth, striking enrichments of these metals in dissolved and solid forms were observed. Offset distributions between oxygen penetration and Mn reduction and the thickness of the Mn oxide-rich layer indicate fluctuations of the Mn redox boundary on a short-term time scale. Within the objectives of the German ATESEPP research programme, the effect of an industrial impact such as manganese nodule mining on the heavy metal cycle in the surface sediment was considered. If the oxic surface were to be removed or disturbed, oxygen would penetrate deep into the formerly suboxic sediment and precipitate Mn 2+ and metals like Ni and Co which are preferably scavenged by MnO 2. The solid enrichments of Cd, V, and other metals formed in post-oxic environments would move downward with the new redox boundary until a new equilibrium between oxygen diffusion and consumption is reached.

The Rusty Sink: Iron Promotes the Preservation of Organic Matter in Sediments

NASA Astrophysics Data System (ADS)

Lalonde, K. M.; Mucci, A.; Moritz, A.; Ouellet, A.; Gelinas, Y.

2011-12-01

The biogeochemical cycles of iron (Fe) and organic carbon (OC) are strongly interlinked. In oceanic waters, organic ligands have been shown to control the concentration of dissolved Fe [1], whereas in soils, solid Fe phases provide a sheltering and preservative effect for organic matter [2]. Until now however, the role of iron in the preservation of OC in sediments has not been clearly established. Here we show that 21.5 ± 8.6% of the OC in sediments is directly bound to reactive iron phases, which promote the preservation of OC in sediments. Iron-bound OC represents a global mass of 19 to 45 × 10^15 g of OC in surface marine sediments. This pool of OC is different from the rest of sedimentary OC, with 13C and nitrogen-enriched organic matter preferentially bound to Fe which suggests that biochemical fractionation occurs with OC-Fe binding. Preferential binding also affects the recovery of high molecular weight lipid biomarkers and acidic lignin oxidation products, changing the environmental message of proxies derived from these biomarkers. [1] Johnson, K. S., Gordon, R. M. & Coale, K. H. What controls dissolved iron in the world ocean? Marine Chemistry 57, 137-161 (1997). [2] Kaiser, K. & Guggenberger, G. The role of DOM sorption to mineral surfaces in the preservation of organic matter in soils. Organic Geochemistry 31, 711-725 (2000).

EUTROPHICATION OF CHESAPEAKE BAY: HISTORICAL TRENDS AND ECOLOGICAL INTERACTIONS

EPA Science Inventory

This review provides an integrated synthesis with timelines and evaluations of ecological responses to eutrophication in Chesapeake Bay, the largest estuary in the USA. Analyses of dated sediment cores reveal initial evidence of organic enrichment in approximately 200 y-old strat...

The combined effects of sediment accretion (burial) and nutrient enrichment on the growth and propagation of Phalaris arundinacea

PubMed Central

Chen, Xinsheng; Liao, Yulin; Xie, Yonghong; Wu, Chao; Li, Feng; Deng, Zhengmiao; Li, Xu

2017-01-01

Sediment accretion (burial) and nutrient enrichment occur concurrently in lacustrine wetlands, but the role of these two aspects of sedimentation on macrophyte performance has rarely been examined. Here, we investigated the concurrent effects of sediment accretion and nutrient enrichment on the growth and propagation of Phalaris arundinacea L. using a factorial sediment burial by nutrient addition experimental design. Regardless of burial depth, nutrient addition increased biomass accumulation, shoot mass ratio, the number of rhizomes, and the length of ramets and rhizomes. While burial had little effect on plant growth and propagation, it had an interactive effect with nutrient addition on belowground growth and ramet production. These results indicate that P. arundinacea is tolerant to burial, which allows it to grow in habitats with high sedimentation rates. However, the enhanced growth and propagation of P. arundinacea following sedimentation were primarily related to nutrient enrichment. This suggests that nutrient enrichment of sediments, which occurs in many lacustrine wetlands, increases the risk of invasion by P. arundinacea. PMID:28054590

Trace metal records of regional paleoenvironmental variability in Pennsylvanian (Upper Carboniferous) black shales

USGS Publications Warehouse

Cruse, A.M.; Lyons, T.W.

2004-01-01

Regional geochemical differences within a laterally continuous, cyclic Pennsylvanian (Upper Carboniferous) shale in midcontinent North America are interpreted in light of models of glacioeustatic forcing and new views on water-column paleoredox stability and trace-metal behavior in black shale environments. Specifically, we characterize differences in transition metal (Fe, Mn, Mo, V, Ni, Zn, Pb and U) concentrations in black shales of the Hushpuckney Shale Member of the Swope Limestone in Iowa and equivalent black shale beds of the Coffeyville Formation in Oklahoma. Although C-S-Fe systematics and uniform 34S-depleted isotope ratios of pyrite indicate pervasive euxinic deposition (anoxic and sulfidic bottom waters) for these shales, regional variations can be inferred for the efficiency of Mo scavenging and for the rates of siliciclastic sedimentation as expressed in spatially varying Fe/Al ratios. Black shales in Iowa show Mo enrichment roughly five times greater than that observed in coeval euxinic shales in Oklahoma. By contrast, Fe/Al ratios in Oklahoma shales are as much as five times greater than the continental ratio of 0.5 observed in the over- and underlying oxic facies and in the coeval black shales in Iowa. Recent work in modern marine settings has shown that enrichments in Fe commonly result from scavenging in a euxinic water column during syngenetic pyrite formation. In contrast to Fe, the concentrations of other transition metals (Mo, V, Ni, Pb, Zn, U) are typically more enriched in the black shales in Iowa relative to Oklahoma. The transition metal trends in these Paleozoic shales are reasonably interpreted in terms of early fixation in organic-rich sediments due to euxinic water-column conditions. However, regional variations in (1) rates of siliciclastic input, (2) organic reservoirs, including relative inputs of terrestrial versus marine organic matter, and (3) additional inputs of metals to bottom waters from contemporaneous hydrothermal vents are additional key controls that lead to geographic variation in the extent of metal enrichments preserved in ancient organic-rich sediments. Published by Elsevier B.V.

Enrichment behavior and transport mechanism of soil-bound PAHs during rainfall-runoff events.

PubMed

Zheng, Yi; Luo, Xiaolin; Zhang, Wei; Wu, Bin; Han, Feng; Lin, Zhongrong; Wang, Xuejun

2012-12-01

Polycyclic Aromatic Hydrocarbons (PAHs) transported by surface runoff result in nonpoint source pollution and jeopardize aquatic ecosystems. The transport mechanism of PAHs during rainfall-runoff events has been rarely studied regarding pervious areas. An experimental system was setup to simulate the runoff pollution process on PAHs-contaminated soil. The enrichment behavior of soil-bound PAHs was investigated. The results show that soil organic matters (SOM), rather than clay particles, seem to be the main carrier of PAHs. The enrichment is highly conditioned on runoff and erosion processes, and its magnitude varies among PAH compounds. It is not feasible to build a simple and universal relationship between enrichment ratio and sediment discharge following the traditional enrichment theory. To estimate the flux of PAHs from pervious areas, soil erosion process has to be clearly understood, and both organic carbon content and composition of SOM should be factored into the calculation. Copyright © 2012 Elsevier Ltd. All rights reserved.

Nitrogen cycling in 2.7 Ga oceans

NASA Astrophysics Data System (ADS)

Yang, J.; Zerkle, A.; Grassineau, N.; Nisbet, E.; Mettam, C.; Izon, G. J.; Morag, H.; Anthony, M.; Newton, J.; Boyce, A.

2016-12-01

A growing body of geochemical evidence suggests that localized oxygenation of the surface earth must have begun much earlier than the GOE ( 2.4 Ga). This could have triggered the emergence of the aerobic biogeochemical cycle of nitrogen (N), an essential nutrient for all organisms. However, the timing of this revolutionary transition is poorly known. Some sediments from 2.7 Ga possess exceptionally high enrichment of 15N. Whether these values are linked to the onset of the aerobic N cycle[1], or reflective of alkaline lakes on land[2], has been in dispute. To explore this, we are investigating one of the best-preserved unambiguously marine Achaean successions from the Belingwe Greenstone Belt, in Zimbabwe. We are focusing on nearly pristine sediments from the 2.7 Ga Manjeri Formation, which span both shallow and deep-water environments, preserving organic-rich shales and some of the oldest and most well-preserved stromatolites. The depositional conditions for this succession are further constrained by iron speciation data and sulfur isotopes, which show a redox transition from ferruginous to oxic environments from older to younger sediments. Nitrogen isotopes in these sediments will constrain the global nature of the extremely 15N-enriched values, and test hypotheses for the Neoarchean nitrogen cycle in a non-disputed marine setting. [1] Thomazo et al. (2011) Geobiology; [2] Stüeken et al. (2015) EPSL.

The anaerobic degradation of organic matter in Danish coastal sediments - Iron reduction, manganese reduction, and sulfate reduction

NASA Technical Reports Server (NTRS)

Canfield, Donald E.; Thamdrup, BO; Hansen, Jens W.

1993-01-01

A combination of porewater and solid phase analysis as well as a series of sediment incubations are used to quantify organic carbon oxidation by dissimilatory Fe reduction, Mn reduction, and sulfate reduction, in sediments from the Skagerrak (located off the northeast coast of Jutland, Denmark). Solid phase data are integrated with incubation results to define the zones of the various oxidation processes. At S(9), surface Mn enrichments of up to 3.5 wt pct were found, and with such a ready source of Mn, dissimilatory Mn reduction was the only significant anaerobic process of carbon oxidation in the surface 10 cm of the sediment. At S(4) and S(6), active Mn reduction occurred; however, most of the Mn reduction may have resulted from the oxidation of acid volatile sulfides and Fe(2+) rather than by a dissimilatory sulfate. Dissolved Mn(2+) was found to completely adsorb onto sediment containing fully oxidized Mn oxides.

Interconnection of Key Microbial Functional Genes for Enhanced Benzo[a]pyrene Biodegradation in Sediments by Microbial Electrochemistry.

PubMed

Yan, Zaisheng; He, Yuhong; Cai, Haiyuan; Van Nostrand, Joy D; He, Zhili; Zhou, Jizhong; Krumholz, Lee R; Jiang, He-Long

2017-08-01

Sediment microbial fuel cells (SMFCs) can stimulate the degradation of polycyclic aromatic hydrocarbons in sediments, but the mechanism of this process is poorly understood at the microbial functional gene level. Here, the use of SMFC resulted in 92% benzo[a]pyrene (BaP) removal over 970 days relative to 54% in the controls. Sediment functions, microbial community structure, and network interactions were dramatically altered by the SMFC employment. Functional gene analysis showed that c-type cytochrome genes for electron transfer, aromatic degradation genes, and extracellular ligninolytic enzymes involved in lignin degradation were significantly enriched in bulk sediments during SMFC operation. Correspondingly, chemical analysis of the system showed that these genetic changes resulted in increases in the levels of easily oxidizable organic carbon and humic acids which may have resulted in increased BaP bioavailability and increased degradation rates. Tracking microbial functional genes and corresponding organic matter responses should aid mechanistic understanding of BaP enhanced biodegradation by microbial electrochemistry and development of sustainable bioremediation strategies.

Origin and migration of trace elements in the surface sediments of Majuro Atoll, Marshall Islands.

PubMed

Ito, Lisa; Omori, Takayuki; Yoneda, Minoru; Yamaguchi, Toru; Kobayashi, Ryuta; Takahashi, Yoshio

2018-07-01

The sediments of Majuro Atoll, Marshall Islands, consist of bioclastic materials, including foraminifera and coral debris. The sedimentary depth profiles of elements showed that various elements including zinc (Zn) and copper (Cu) were enriched in the upper layers of the islands of Majuro Atoll. Carbon-14 dating revealed that the sedimentation of the upper layer was completed before 1670 and 542 cal BP in Laura and Calalen, respectively. The enriched elements could be categorized by their origins: (a) terrestrial elements transported as dust (aluminum (Al) and rare earth elements (REEs)); (b) anthropogenic elements (Zn and Cu); and (c) elements supplied by seabirds (phosphorus (P)). From the results of the total amount of Al supplied to sediments for ca. 2000 years, Al in Majuro Atoll was suggested to be airborne origin. The enrichment factors of the elements normalized to Al concentration of continental crust showed that REEs were also transported as dust, while Zn and Cu were mainly of anthropogenic origin. The speciation analysis by X-ray absorption near-edge structure (XANES) showed the presence of Zn-Cu alloys originated from industrial products. It was also revealed that Zn was enriched in the surface due to anthropogenic emission after urbanization on Majuro Atoll and fixed by carbonate and phosphate at the upper layer, which inhibits migration of Zn into the deeper layer and its release to the groundwater and costal water. Hence, the fixation of heavy metals at the surface prevents their exposure to aquatic organisms and residents via fresh groundwater in the island. Copyright © 2018 Elsevier Ltd. All rights reserved.

Eutrophication and Hypoxia Degrade Ecosystem Functions and Services of Narragansett Bay Benthic Communities

EPA Science Inventory

Excessive input of nitrogen to estuaries and coastal waters leads to eutrophication; the resulting organic matter over-enrichment of the sediments and seasonal hypoxia of the bottom water have well-known deleterious effects on benthic community biodiversity, abundance, and biomas...

RESPONSE OF GHOST SHRIMP (NEOTRYPAEA CALIFORNIENSIS) BIOTURBATION TO ORGANIC MATTER ENRICHMENT OF ESTUARINE INTERTIDAL SEDIMENTS

EPA Science Inventory

Populations of burrowing shrimp (Neotrypaea californiensis and Upogebia p;ugettensis) are the dominant invertebrate fauna on Pacific estuarine tide flats, occupying >80% of intertidal area in some estuaries. Burrowing shrimp are renowned for their bioturbation of intertidal sedi...

Eutrophication and Hypoxia Diminish Ecosystem Functions of Benthic Communities in a New England Estuary

EPA Science Inventory

Excessive input of nitrogen to estuaries and coastal waters leads to eutrophication; the resulting organic matter over-enrichment of sediments and seasonal hypoxia of bottom water have significant deleterious effects on benthic community biodiversity, abundance, and biomass. Our ...

Trace elements and organic compounds in sediment and fish tissue from the Great Salt Lake basins, Utah, Idaho, and Wyoming, 1998-99

USGS Publications Warehouse

Waddell, Kidd M.; Giddings, Elise M.

2004-01-01

A study to determine the occurrence and distribution of trace elements, organochlorine pesticides, polychlorinated biphenyls (PCBs), and semivolatile organic compounds in sediment and in fish tissue was conducted in the Great Salt Lake Basins study unit of the National Water-Quality Assessment (NAWQA) program during 1998-99. Streambed-sediment and fish-tissue samples were collected concurrently at 11 sites and analyzed for trace-element concentration. An additional four sites were sampled for streambed sediment only and one site for fish tissue only. Organic compounds were analyzed from streambed-sediment and fish-tissue samples at 15 sites concurrently.Bed-sediment cores from lakes, reservoirs, and Farmington Bay collected by the NAWQA program in 1998 and by other researchers in 1982 were used to examine historical trends in trace-element concentration and to determine anthropogenic sources of contaminants. Cores collected in 1982 from Mirror Lake, a high-mountain reference location, showed an enrichment of arsenic, cadmium, copper, lead, tin, and zinc in the surface sediments relative to the deeper sediments, indicating that enrichment likely began after about 1900. This enrichment was attributed to atmospheric deposition during the period of metal-ore mining and smelting. A core from Echo Reservoir, in the Weber River Basin, however, showed a different pattern of trace-element concentration that was attributed to a local source. This site is located downstream from the Park City mining district, which is the most likely historical source of trace elements. Cores collected in 1998 from Farmington Bay show that the concentration of lead began to increase after 1842 and peaked during the mid-1980s and has been in decline since. Recent sediments deposited during 1996-98 indicate a 41- to 62-percent reduction since the peak in the mid-1980s.The concentration of trace elements in streambed sediment was greatest at sites that have been affected by historic mining, including sites on Little Cottonwood Creek in the Jordan River basin, Silver Creek in the Weber River basin, and the Weber River below the confluence with Silver Creek. There was significant correlation of lead concentrations in streambed sediment and fish tissue, but other trace elements did not correlate well. Streambed sediment and fish tissue collected from sites in the Bear River basin, which is predominantly rangeland and agriculture, generally had low concentrations of most elements.Sediment-quality guidelines were used to assess the relative toxicity of streambed-sediment sites to aquatic communities. Sites affected by mining exceeded the Probable Effect Concentration (PEC), the concentration at which it is likely there will be a negative effect on the aquatic community, for arsenic, cadmium, copper, lead, silver, mercury, and zinc. Sites that were not affected by mining did not exceed these criteria. Concentrations of trace elements in samples collected from the Great Salt Lake Basins study unit (GRSL) are high compared to those of samples collected nationally with the NAWQA program. Nine of 15 streambed-sediment samples and 11 of 14 fish-tissue samples had concentrations of at least one trace element greater than the concentration of 90 percent of the samples collected nationally during 1993-2000.Organic compounds that were examined in streambed sediment and fish-tissue samples also were examined in bed-sediment cores. A bed-sediment core from Farmington Bay of Great Salt Lake showed an increase in total polycyclic aromatic hydrocarbon (PAH) concentrations coincident with the increase in population in Salt Lake Valley, which drains into this bay. Analysis of streambed-sediment samples showed that the highest concentrations of PAHs were detected at urban sites, including two sites in the lower Jordan River (the Jordan River flows into Farmington Bay), the Weber River at Ogden Bay, and the Provo River near Provo. Other organic compounds detected in streambed sediment in the lower Jordan River were PCBs, DDT compounds, and chlordane compounds.Organic compounds were detected more frequently in fish tissue than in streambed sediment. Chlordane compounds and PCBs were detected more frequently at urban sites. DDT compounds were detected at 13 of 15 sites including urban and agricultural sites. Concentrations of total DDT in fish tissue exceeded the guideline for protection of fish-eating wildlife at two urban sites. The concentration of organic compounds in the GRSL study unit is low compared with that of samples collected nationally.

Tidal river sediments in the Washington, D.C. area. 1. Distribution and sources of trace metals

DOE Office of Scientific and Technical Information (OSTI.GOV)

Velinsky, D.J.; Wade, T.L.; Schlekat, C.E.

1994-06-01

Thirty-three bottom sediments were collected from the Potomac and Anacostia rivers, Tidal Basin, and Washington Ship Channel in June 1991 to define the extent of trace metal contamination and to elucidate source areas of sediment contaminants. In addition, twenty-three sediment samples were collected directly in front of and within major storm and combined sewers that discharge directly to these areas. Trace metals (e.g., Cu, Crk Cd, Hg, Pb, and Zn) exhibited a wide range in values in the study area. Sediment concentrations of Pb ranged from 32.0{mu}g Pb g {sup -1} to 3,630 {mu}g Pb g{sup -1}, Cd from 0.24more » {mu}g Cd g{sup -1} to 4.1 {mu}g Cd g{sup -1}, and Hg from 0.13 {mu}g g{sup -1} to 9.2 {mu}g Hg g{sup -1}, with generally higher concentrations in either outfall or sewer sediments compared to river bottom-sediments. In the Anacostia River measurements indicate that numerous storm and combined sewers are major sources of trace metals. Similar results were observed in both the Tidal Basin and Washington Ship Channel. Cadmium and Pb concentrations are higher in specific sewers and outfalls, whereas the distribution of other metals suggests a more diffuse source to the rivers and basins of the area. Cadmium and Pb also exhibited the greatest enrichment throughout the study area, with peak values in the Anacostia River, near the Washington Navy Yard. Enrichment factors decrease in the order: Cd>Pb>Zn>Hg>Cu>Cr. Between 70% and 96% of sediment-bound Pb and Cd was released from a N{sub 2}-purged 1N HCI leach. On average, {le}40% of total sedimentary Cu was liberated, possibly due to the partial attack of organic components of the sediment. Sediments of the tidal freshwater portion of the Potomac estuary reflect moderate to highly contaminated area with substantial enrichments of sedimentary Pb, Cd, and Zn. The sediment phase containing these metals indicates potential mobility of the sediment-bound metals during either storm events or dredging. 39 refs., 5 figs., 6 tabs.« less

Chemical Mapping of Proterozoic Organic Matter at Sub-Micron Spatial Resolution

NASA Technical Reports Server (NTRS)

Oehler, Dorothy Z.; Robert, Francois; Mostefaoui, Smail; Meibom, Anders; Selo, Madeleine; McKay, David S.

2006-01-01

We have used a NanoSIMS ion microprobe to map sub-micron-scale distributions of carbon, nitrogen, sulfur, silicon, and oxygen in organic microfossils and laminae from the approximately 0.85 Ga Bitter Springs Formation of Australia. The data provide clues about the original chemistry of the microfossils, the silicification process, and biosignatures of specific microorganisms and microbial communities. Chemical maps of fossil unicells and filaments reveal distinct wall-and sheath-like structures enriched in C, N and S, consistent with their accepted biological origin. Surprisingly, organic laminae, previously considered to be amorphous, also exhibit filamentous and apparently compressed spheroidal structures defined by strong enrichments in C, N and S. By analogy to data from the well-preserved microfossils, these structures are interpreted as being of biological origin, most likely representing densely packed remnants of microbial mats. Because the preponderance of organic matter in Precambrian sediments is similarly "amorphous," our findings open a large body of generally neglected material to in situ structural, chemical, and isotopic study. Our results also offer new criteria for assessing biogenicity of problematic kerogenous materials and thus can be applied to assessments of poorly preserved or fragmentary organic residues in early Archean sediments and any that might occur in meteorites or other extraterrestrial samples.

Trace metal concentrations in tropical mangrove sediments, NE Brazil.

PubMed

Miola, Brígida; Morais, Jáder Onofre de; Pinheiro, Lidriana de Souza

2016-01-15

Sediment cores were taken from the mangroves of the Coreaú River estuary off the northeast coast of Brazil. They were analyzed for grain size, CaCO3, organic matter, and trace metal (Cd, Pb, Zn, Cu, Al, and Fe) contents. Mud texture was the predominant texture. Levels of trace metals in surface sediments indicated strong influence of anthropogenic processes, and diagenetic processes controlled the trace metal enrichment of core sediments of this estuary. The positive relationships between trace metals and Al and Fe indicate that Cu, Zn, Pb, and Cd concentrations are associated mainly with Al and Fe oxy-hydroxides and have natural sources. Copyright © 2015 Elsevier Ltd. All rights reserved.

The application of profile imaging for monitoring organic and metal pollution in the Venice lagoon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bona, F.; Maffiotti, A.

1995-12-31

Since 1993 the technique of Sediment Profile Imaging (SPI) has been applied in monitoring the Venice Lagoon. The purposes of the monitoring were several, ranging from an initial baseline survey of sediment quality, to the control of Ulva rigida proliferation, to sediment quality assessment for dredging and capping activities in restricted areas of the lagoon. Data resulting from each computer image analysis have been summarized in one index which takes into consideration the mutual interactions between the physical and chemical conditions and the benthic community. In this way a spatial and seasonal gradient in the quality Venice Lagoon sediments hasmore » been established and the key roles of the organic enrichment and of the ecosystem hydrodynamics have been confirmed. The underwater camera and image analysis have also been an effective screening tool to address further investigations in those areas of particular concern for sediment contamination. On the basis of the SPI indices a selection of stations has been made in order to sample and perform sediment toxicity tests and chemical analyses to assess contamination levels.« less

Non-steady state diagenesis of organic and inorganic sulfur in lake sediments

NASA Astrophysics Data System (ADS)

Couture, Raoul-Marie; Fischer, Rachele; Van Cappellen, Philippe; Gobeil, Charles

2016-12-01

Sulfur controls the fate of many geochemical elements in lake sediments, including iron, phosphorus and environmentally important trace elements. We measured the speciation of pore-water and sediment-bound sulfur (aqueous sulfate and sulfides, elemental sulfur, iron monosulfide, pyrite, organic sulfur) and supporting geochemical variables (carbon, oxygen, iron) in the sediments of a perennially oxygenated and a seasonally anoxic basin of an oligotrophic lake in Québec, using a combination of pore-water analyses, sequential extractions and X-ray absorption near edge structure. A non-steady state early diagenetic model was developed and calibrated against this extensive dataset to help unravel the pathways and quantify the rates of S transformations. Results suggest that the main source of S to the sediments is the settling of organic ester-sulfate (R-O-SO3-H). Hydrolysis of these compounds provides an additional source of sulfate for anaerobic microbial oxidation of sedimentary organic matter, releasing sulfide to the pore-water. Reduced solid-bound S species accumulate as thiols (R-SH) and iron sulfides in the perennially oxygenated and seasonally anoxic basin, respectively. The model-estimated rate constant for R-SH formation is lower than previously estimated for this particular lacustrine site, but similar to that proposed for marine shelf sediments. The solid sediment S profiles, however, carry the imprint of the time-dependent sulfate input to the lake. Iron sulfide enrichments formed during past decades of elevated atmospheric SO4 deposition are presently dissolving. In the sediments of the perennially oxygenated basin this reaction hampers the build-up of Fe(III) (oxy)hydroxide near the sediment-water interface.

Carbon isotope fractionation of sapropelic organic matter during early diagenesis

USGS Publications Warehouse

Spiker, E. C.; Hatcher, P.G.

1984-01-01

Study of an algal, sapropelic sediment from Mangrove Lake, Bermuda shows that the mass balance of carbon and stable carbon isotopes in the major organic constituents is accounted for by a relatively straightforward model of selective preservation during diagenesis. The loss of 13C-enriched carbohydrates is the principal factor controlling the intermolecular mass balance of 13C in the sapropel. Results indicate that labile components are decomposed leaving as a residual concentrate in the sediment an insoluble humic substance that may be an original biochemical component of algae and associated bacteria. An overall decrease of up to about 4??? in the ?? 13C values of the organic matter is observed as a result of early diagenesis. ?? 1984.

Organic matter diagenesis within the water column and surface sediments of the northern Sargasso Sea revealed by lipid biomarkers

NASA Astrophysics Data System (ADS)

Conte, M. H.; Pedrosa Pàmies, R.; Weber, J.

2017-12-01

The intensity of particle cycling processes within the mesopelagic and bathypelagic ocean controls the length scale of organic material (OM) remineralization and diagenetic transformations of OM composition through the water column and into the sediments. To elucidate the OM cycling in the oligotrophic North Atlantic gyre, we analyzed lipid biomarkers in the suspended particles (30-4400 m depth, 100 mab), the particle flux (500 m, 1500 m and 3200 m depth), and in the underlying surficial sediments (0-0.5 cm, 4500-4600 m depth) collected at the Oceanic Flux Program (OFP) time series site located 75km SE of Bermuda. Changes in lipid biomarker concentration and composition with depth highlight the rapid remineralization of OM within the upper mesopelagic layer and continuing diagenetic transformations of OM throughout the water column and within surficial sediments. Despite observed similarities in biomarker composition in suspended and sinking particles, results show there are also consistent differences in relative contributions of phytoplankton-, bacterial- and zooplankton-derived sources that are maintained throughout the water column. For example, sinking particles are more depleted in labile biomarkers (e.g. polyunsaturated fatty acids (PUFA)) and more enriched in bacteria-derived biomarkers (e.g. hopanoids and odd/branched fatty acids) and indicators of fecal-derived OM (e.g. saturated fatty acids, FA 18:1w9 and cholesterol) than in the suspended pool. Strong seasonality in deep (3200 m) fluxes of phytoplankton-derived biomarkers reflect the seasonal input of bloom-derived material to underlying sediments. The rapid diagenetic alteration of this bloom-derived input is evidenced by depletion of PUFAs and enrichment of microbial biomarkers (e.g. odd/branched fatty acids) in surficial sediments over a two month period.

Fe-C-S systematics in Bengal Fan sediments

NASA Astrophysics Data System (ADS)

Volvoikar, S. P.; Mazumdar, A.; Goswami, H.; Pujari, S.; Peketi, A.

2017-12-01

Global biogeochemical cycles of iron, carbon and sulfur (Fe-C-S) are interrelated. Sulfate reduction in marine sediments is the major factor controlling the cycling and burial of carbon, sulfur and iron. Organoclastic sulfate reduction and anaerobic oxidation of methane (AOM) are the two main processes responsible for sulfate reduction in marine sediments. The amount and reactivity of organic matter, iron minerals and concentrations of dissolved sulfide in pore water control the burial of iron sulfide and organic bound sulfur in marine sediments. Here we investigate the sulfidization process in a sediment core from the western part of upper Bay of Bengal fan characterized by efficient burial of organic matter with siliclastic load. A 30 m long sediment core (MD 161/29, Lat. 170 18.04' N, Long. 870 22.56' E, water depth: 2434m) was collected onboard Marion Dufresne (May, 2007) and studied for Fe-S speciation and organic matter characterization. Buffered dithionite extractable iron (FeD) varies from 0.71 to 1.43 wt % (Avg. 0.79 wt %). FeD represents Fe oxides and oxyhydroxides mainly, ferrihydrite, lepidocrocite, goethite and hematite. Acid volatile sulfur (AVS) varies from 0.0015 to 0.63 wt % (avg: 0.058 wt %), while chromium reducible sulfur (CRS) varies from 0.00047 to 0.29 wt % (avg. 0.054 wt %). Based on the vertical distribution patterns of FeD, AVS and CRS, the core is divided into three zones, the lower (3000 to 1833 cm), middle (1833 to 398 cm) and upper (398 cm to surface) zones. FeD shows higher concentration in the lower zone. FeTR (FeOx + FeD + FeCRS + FeAVS) also exhibit higher concentration in this zone, suggesting higher availability of reactive iron for iron sulfide precipitation. AVS, elemental sulfur, spikes of CRS and gradual enrichment of δ34SAVS and δ34SCRS with sharp peaks in-between is noted in the lower zone. The gradual enrichment of δ34SAVS and δ34SCRS is the outcome of late diagenetic pyritization with higher availability of sulfide (HS- and H2S) from AOM.

Isolation and Characterization of Microbes Mediating Thermodynamically Favorable Coupling of Anaerobic Oxidation of Methane and Metal Reduction

NASA Astrophysics Data System (ADS)

Glass, J. B.; Reed, B. C.; Sarode, N. D.; Kretz, C. B.; Bray, M. S.; DiChristina, T. J.; Stewart, F. J.; Fowle, D. A.; Crowe, S.

2014-12-01

Methane is the third most reduced environmentally relevant electron donor for microbial metabolisms after organic carbon and hydrogen. In anoxic ecosystems, the major sink for methane is anaerobic oxidation of methane (AOM) mediated by syntrophic microbial consortia that couple AOM to reduction of an oxidized electron acceptor to yield free energy. In marine sediments, AOM is generally coupled to reduction of sulfate despite an extremely small amount of free energy yield because sulfate is the most abundant electron acceptor in seawater. While AOM coupled to Fe(III) and Mn(IV) reduction (Fe- and Mn-AOM) is 10-30x more thermodynamically favorable than sulfate-AOM, and geochemical data suggests that it occurs in diverse environments, the microorganisms mediating Fe- and Mn-AOM remain unknown. Lake Matano, Indonesia is an ideal ecosystem to enrich for Fe- and Mn-AOM microbes because its anoxic ferruginous deep waters and sediments contain abundant Fe(III), Mn(IV) and methane, and extremely low sulfate and nitrate. Our research aims to isolate and characterize the microbes mediating Fe- and Mn-AOM from three layers of Lake Matano sediments through serial enrichment cultures in minimal media lacking nitrate and sulfate. 16S rRNA amplicon sequencing of sediment inoculum revealed the presence of the Fe(III)-reducing bacterium Geobacter (5-10% total microbial community in shallow sediment and 35-60% in deeper sediment) as well as 1-2% Euryarchaeota implicated in methane cycling, including ANME-1 and 2d and Methanosarcinales. After 90 days of primary enrichment, all three sediment layers showed high levels of Fe(III) reduction (60-90 μM Fe(II) d-1) in the presence of methane compared to no methane and heat-killed controls. Treatments with added Fe(III) as goethite contained higher abundances of Geobacter than the inoculum (60-80% in all layers), suggesting that Geobacter may be mediating Fe(III) reduction in these enrichments. Quantification of AOM rates is underway, and will be used to estimate the plausibility of metal-AOM as a thermodynamically favorable methane sink in anoxic ecosystems of both the modern and ancient Earth.

Distribution and contamination status of chromium in surface sediments of northern Kaohsiung Harbor, Taiwan.

PubMed

Dong, Cheng-Di; Chen, Chiu-Wen; Chen, Chih-Feng

2013-07-01

The distribution, enrichment, accumulation, and potential ecological risk of chromium (Cr) in the surface sediments of northern Kaohsiung Harbor, Taiwan, China were investigated. Sediment samples from ten locations located between the river mouths and harbor entrance of northern Kaohsiung Harbor were collected quarterly in 2011 and characterized for Cr, aluminum, water content, organic matter, total nitrogen, total phosphorous, total grease, and grain size. Results showed that the Cr concentrations varied from 27.0 to 361.9 mg/kg with an average of (113.5 +/- 87.0) mg/kg. High Cr concentration was observed near the Jen-Gen River mouth. The mean Cr concentration was high at 255.5 mg/kg, which was at least 2 to 7 times than that of other sites. This might imply significant Cr contribution from upstream receiving tanneries wastewater into the Jen-Gen River. The spatial distribution of Cr reveals relatively high in the river mouth region, especially in Jen-Gen River, and gradually diminishes toward the harbor entrance region. This indicates that the major sources of Cr pollution from upstream industrial and municipal wastewaters discharged along the river bank; and Cr may drift with sea current and be dispersed into open sea. Moreover, Cr concentrations correlated closely to the physical-chemical properties of the sediments, which suggested the influence of industrial and municipal wastewaters discharged from the neighboring industrial parks and river basins. Results from the enrichment factor and geo-accumulation index analyses imply that the Jen-Gen River sediments can be characterized as moderate enrichment and none to medium accumulation of Cr, respectively. However, results of potential ecological risk index indicate that the sediment has low ecological potential risk. The results can provide valuable information to developing future strategies for the management of river mouth and harbor.

Nitrification in the Upper Mississippi River: Patterns, controls, and contribution to the NO3- budget

USGS Publications Warehouse

Strauss, E.A.; Richardson, W.B.; Bartsch, L.A.; Cavanaugh, J.C.; Bruesewitz, D.A.; Imker, H.; Heinz, J.A.; Soballe, D.M.

2004-01-01

We measured nitrification rates in sediment samples collected from a variety of aquatic habitats in Navigation Pool 8 of the Upper Mississippi River (UMR) 7 times between May 2000 and October 2001. We also conducted nutrient-enrichment experiments and analyzed vertical profiles of sediment to determine factors regulating nitrification. Nitrification rates were relatively high compared to other ecosystems (ranging from 0-8.25 ??g N cm-2 h-1) and exhibited significant temporal and spatial patterns. Nitrification rates were greatest during the summer and spring compared to autumn and winter (ANOVA, p < 0.05) and were greater in contiguous backwater and impounded habitats compared to main and side-channel habitats (p < 0.05). Regression analysis indicated that nitrification rates were weakly (r 2 = 0.18, p < 0.0001) related to temperature and exchangeable NH4+ of the sediment. However, nutrient-enrichment experiments showed that NH4+ availability did not limit nitrification in 3 sediment types with variable organic matter. Vertical profiles of sediment cores demonstrated that oxygen concentration and nitrification had similar patterns suggesting that nitrification may be limited by oxygen penetration into sediments. We conclude that temperature and sediment NH4+ can be useful for predicting broad-scale temporal and spatial nitrification patterns, respectively, but oxygen penetration into the sediments likely regulates nitrification rates in much of the UMR. Overall, we estimated that nitrification produces 6982 mt N/y of NO3- or 7% of the total annual NO3- budget.

Soil Organic Carbon Redistribution by Water Erosion – The Role of CO2 Emissions for the Carbon Budget

PubMed Central

Wang, Xiang; Cammeraat, Erik L. H.; Romeijn, Paul; Kalbitz, Karsten

2014-01-01

A better process understanding of how water erosion influences the redistribution of soil organic carbon (SOC) is sorely needed to unravel the role of soil erosion for the carbon (C) budget from local to global scales. The main objective of this study was to determine SOC redistribution and the complete C budget of a loess soil affected by water erosion. We measured fluxes of SOC, dissolved organic C (DOC) and CO2 in a pseudo-replicated rainfall-simulation experiment. We characterized different C fractions in soils and redistributed sediments using density fractionation and determined C enrichment ratios (CER) in the transported sediments. Erosion, transport and subsequent deposition resulted in significantly higher CER of the sediments exported ranging between 1.3 and 4.0. In the exported sediments, C contents (mg per g soil) of particulate organic C (POC, C not bound to soil minerals) and mineral-associated organic C (MOC) were both significantly higher than those of non-eroded soils indicating that water erosion resulted in losses of C-enriched material both in forms of POC and MOC. The averaged SOC fluxes as particles (4.7 g C m−2 yr−1) were 18 times larger than DOC fluxes. Cumulative emission of soil CO2 slightly decreased at the erosion zone while increased by 56% and 27% at the transport and depositional zone, respectively, in comparison to non-eroded soil. Overall, CO2 emission is the predominant form of C loss contributing to about 90.5% of total erosion-induced C losses in our 4-month experiment, which were equal to 18 g C m−2. Nevertheless, only 1.5% of the total redistributed C was mineralized to CO2 indicating a large stabilization after deposition. Our study also underlines the importance of C losses by particles and as DOC for understanding the effects of water erosion on the C balance at the interface of terrestrial and aquatic ecosystems. PMID:24802350

Early diagenesis and trace element accumulation in North American Arctic margin sediments

NASA Astrophysics Data System (ADS)

Kuzyk, Zou Zou A.; Gobeil, Charles; Goñi, Miguel A.; Macdonald, Robie W.

2017-04-01

Concentrations of redox-sensitive elements (S, Mn, Mo, U, Cd, Re) were analyzed in a set of 27 sediment cores collected along the North American Arctic margin (NAAM) from the North Bering Sea to Davis Strait via the Canadian Archipelago. Sedimentary distributions and accumulation rates of the elements were used to evaluate early diagenesis in sediments along this section and to estimate the importance of this margin as a sink for key elements in the polar and global oceans. Distributions of Mn, total S and reduced inorganic S demonstrated that diagenetic conditions and thus sedimentary carbon turnover in the NAAM is organized regionally: undetectable or very thin layers (<0.5 cm) of surface Mn enrichment occurred in the Bering-Chukchi shelves; thin layers (1-5 cm) of surface Mn enrichment occurred in Barrow Canyon and Lancaster Sound; and thick layers (5-20 cm) of surface Mn enrichment occurred in the Beaufort Shelf, Canadian Archipelago, and Davis Strait. Inventories of authigenic S below the Mn-rich layer decreased about fivefold from Bering-Chukchi shelf and Barrow Canyon to Lancaster Sound and more than ten-fold from Bering-Chukchi shelf to Beaufort Shelf, Canadian Archipelago and Davis Strait. The Mn, total S and reduced inorganic S distributions imply strong organic carbon (OC) flux and metabolism in the Bering-Chukchi shelves, lower aerobic OC metabolism in Barrow Canyon and Lancaster Sound, and deep O2 penetration and much lower OC metabolism in the Beaufort Shelf, Canadian Archipelago, and Davis Strait. Accumulation rates of authigenic S, Mo, Cd, Re, and U displayed marked spatial variability along the NAAM reflecting the range in sedimentary redox conditions. Strong relationships between the accumulation rates and vertical carbon flux, estimated from regional primary production values and water depth at the coring sites, indicate that the primary driver in the regional patterns is the supply of labile carbon to the seabed. Thus, high primary production combined with a shallow water column (average 64 m) leads to high rates of authigenic trace element accumulation in sediments from the Bering-Chukchi shelves. High to moderate primary production combined with deep water (average 610 m) leads to moderate rates of authigenic trace element accumulation in sediments from Lancaster Sound. Low to very low primary production combined with moderate water depths (average 380 m) leads to low rates of authigenic trace element accumulation in sediments in the Beaufort Shelf, Davis Strait and Canadian Archipelago. Authigenic Mo accumulation rates show a significant relationship with vascular plant input to the sediments, implying that terrestrial organic matter contributes significantly to metabolism in Arctic margin sediments. Our results suggest that the broad and shallow shelf of the Chukchi Sea, which has high productivity sustained by imported nutrients, contributes disproportionately to global biogeochemical cycles.

Evaluation of organic compounds and trace elements in Amazon Creek Basin, Oregon, September 1990

USGS Publications Warehouse

Rinella, F.A.

1993-01-01

Water and bottom sediment were collected from Amazon Creek, Oregon during a summer low-flow condition and analyzed for different classes of organic compounds, including many from the U.S. Environmental Protection Agency's priority pollutant list. Bottom sediment also was analyzed for trace elements typically associated with urban runoff. Trace-element concentrations in the less than 63 micrometer fraction of Amazon Creek bottom-sediment samples were compared with baseline concentrations (expected 95 percent confidence range) for soils from the Western United States and with concen- trations found in bottom sediment from the Willamette River Basin. Total-digestion concentrations of antimony, arsenic, cadmium, chromium, cobalt, copper, lead, manganese, mercury, nickel, silver, titanium, and zinc were enriched at some or all sites sampled. Whole-water samples from some sites contained concentrations of several chlorophenoxy-acid herbicides, the organophosphorus insecticide diazinon, and several semivolatile priority pollutants. Classes of compounds not detected in whole-water samples included carbamate insecticides, triazine and other nitrogen-containing herbicides, and purgeable organic compounds. Bottom-sediment samples contained many organochlorine compounds, including chlordane, DDT plus metabolites, dieldrin, endrin, heptachlor epoxide (a metabolite of heptachlor), and PCBs at some or all sites sampled. Twenty-four of 54 semivolatile compounds were detected in bottom- sediment samples at some or all sites sampled.

A depocenter of organic matter at 7800 m depth in the SE Pacific Ocean

NASA Astrophysics Data System (ADS)

Danovaro, R.; Della Croce, N.; Dell'Anno, A.; Pusceddu, A.

2003-12-01

The Atacama trench, the deepest ecosystem of the southern Pacific Ocean (ca. 8000 m depth) was investigated during the Atacama Trench International Expedition. Sediments, collected at three bathyal stations (1040-1355 m depth) and at a hadal site (7800 m) were analyzed for organic matter quantity and biochemical composition (in terms of phytopigments, proteins, carbohydrates and lipids), bacterial abundance, biomass and carbon production and extracellular enzymatic activities. Functional chlorophyll- a (18.0±0.10 mg m -2), phytodetritus (322.2 mg m -2) and labile organic carbon (16.9±4.3 g C m -2) deposited on surface sediments at hadal depth (7800 m) reached concentrations similar to those encountered in highly productive shallow coastal areas. High values of bacterial C production and aminopeptidase activity were also measured (at in situ temperature and 1 atm). The chemical analyses of the Atacama hadal sediments indicate that this trench behaves as a deep oceanic trap for organic material. We hypothesize that, despite the extreme physical conditions, benthic microbial processes might be accelerated as a result of the organic enrichment.

Effects of vegetation and fecal pellets on the erodibility of cohesive sediments: Ganghwa tidal flat, west coast of Korea.

PubMed

Ha, Ho Kyung; Ha, Hun Jun; Seo, Jun Young; Choi, Sun Min

2018-06-04

Although the Korean tidal flats in the Yellow Sea have been highlighted as a typical macrotidal system, so far, there have been no measurements of the sediment erodibility and critical shear stress for erosion (τ ce ). Using the Gust erosion microcosm system, a series of field experiments has been conducted in the Ganghwa tidal flat to investigate quantitatively the effects of biogenic materials on the erodibility of intertidal cohesive sediments. Four representative sediment cores with different surficial conditions were analyzed to estimate the τ ce and eroded mass. Results show that τ ce of the "free" sediment bed not covered by any biogenic material on the Ganghwa tidal flat was in the range of 0.1-0.2 Pa, whereas the sediment bed partially covered by vegetation (Phragmites communis) or fecal pellets had enhanced τ ce up to 0.45-0.6 Pa. The physical presence of vegetation or fecal pellets contributed to protection of the sediment bed by blocking the turbulent energy. An inverse relationship between the organic matter included in the eroded mass and the applied shear stress was observed. This suggests that the organic matter enriched in a near-bed fluff layer is highly erodible, and the organic matter within the underlying sediment layer becomes depleted and less erodible with depth. Our study underlines the role of biogenic material in stabilizing the benthic sediment bed in the intertidal zone. Copyright © 2018 Elsevier Ltd. All rights reserved.

Cumulative effects of suspended sediments, organic nutrients and temperature stress on early life history stages of the coral Acropora tenuis.

PubMed

Humanes, Adriana; Ricardo, Gerard F; Willis, Bette L; Fabricius, Katharina E; Negri, Andrew P

2017-03-10

Coral reproduction is vulnerable to both declining water quality and warming temperatures, with simultaneous exposures likely compounding the negative impact of each stressor. We investigated how early life processes of the coral Acropora tenuis respond to increasing levels of suspended sediments in combination with temperature or organic nutrients. Fertilization success and embryo development were more sensitive to suspended sediments than to high temperatures or nutrient enrichment, while larval development (after acquisition of cilia) and settlement success were predominantly affected by thermal stress. Fertilization success was reduced 80% by suspended sediments, and up to 24% by temperature, while the addition of nutrients to suspended sediments had no further impact. Larval survivorship was unaffected by any of these treatments. However, settlement success of larvae developing from treatment-exposed embryos was negatively affected by all three stressors (e.g. up to 55% by suspended sediments), while exposure only during later larval stages predominantly responded to temperature stress. Environmentally relevant levels of suspended sediments and temperature had the greatest impacts, affecting more processes than the combined impacts of sediments and nutrients. These results suggest that management strategies to maintain suspended sediments at low concentrations during coral spawning events will benefit coral recruitment, especially with warming climate.

Cumulative effects of suspended sediments, organic nutrients and temperature stress on early life history stages of the coral Acropora tenuis

NASA Astrophysics Data System (ADS)

Humanes, Adriana; Ricardo, Gerard F.; Willis, Bette L.; Fabricius, Katharina E.; Negri, Andrew P.

2017-03-01

Coral reproduction is vulnerable to both declining water quality and warming temperatures, with simultaneous exposures likely compounding the negative impact of each stressor. We investigated how early life processes of the coral Acropora tenuis respond to increasing levels of suspended sediments in combination with temperature or organic nutrients. Fertilization success and embryo development were more sensitive to suspended sediments than to high temperatures or nutrient enrichment, while larval development (after acquisition of cilia) and settlement success were predominantly affected by thermal stress. Fertilization success was reduced 80% by suspended sediments, and up to 24% by temperature, while the addition of nutrients to suspended sediments had no further impact. Larval survivorship was unaffected by any of these treatments. However, settlement success of larvae developing from treatment-exposed embryos was negatively affected by all three stressors (e.g. up to 55% by suspended sediments), while exposure only during later larval stages predominantly responded to temperature stress. Environmentally relevant levels of suspended sediments and temperature had the greatest impacts, affecting more processes than the combined impacts of sediments and nutrients. These results suggest that management strategies to maintain suspended sediments at low concentrations during coral spawning events will benefit coral recruitment, especially with warming climate.

Salmon as drivers of physical and biological disturbance in river channels

NASA Astrophysics Data System (ADS)

Albers, S. J.; Petticrew, E. L.

2012-04-01

Large migrations across landscapes and ecosystem boundaries combined with disturbances of riverine spawning habitats through nest construction indicate the huge potential that Pacific salmon (Onchorhynchus sp.) have to disturb and alter regional energy flow. Nutrients derived from ocean-reared dead and decaying salmon are released into surrounding aquatic ecosystems fertilizing the water column, recently disturbed by increased suspended sediments due to nest construction. These opposing forces of disturbance and fertilization on spawning habitat have been demonstrated to impact local geomorphic and ecological cycles within salmon streams. An often cited, yet not fully tested, hypothesis is that this pulse of nutrients provided by decaying salmon can shift freshwater habitats to higher production levels. This hypothesis, however, remains contested and uncertain. Fine sediments are increasingly being recognized as important delivery and storage vectors for marine-derived nutrients (MDNs) in spawning streams. The temporal and spatial significance of these sediment vectors on gravelbed storage of MDN have not been quantified thereby restricting our ability to estimate the impact of gravelbed storage of MDNs on the riverine habitats. The objectives of this study were to i) quantify the magnitude of sediment deposition and retention in an active spawning area and ii) determine the contribution of MDN associated with the fine sediment storage. The Horsefly River spawning channel (HFC), an artificial salmon stock enhancement stream, was used to examine the biogeomorphic impacts of salmon spawning. We organized the HFC in an upstream-downstream paired treatment approach where the upstream enclosure was kept free of salmon and the downstream enclosure was loaded with actively spawning salmon. We used the difference in suspended sediment concentration between the salmon enclosure and the control enclosure to determine the contribution of salmon nest construction to suspended sediment concentration. To monitor sediment infiltration into the gravelbed we used modified infiltration bag samplers. Lastly, to examine the contribution of salmon nutrients to the infiltrated sediment we sampled for the presence of a marine isotope signature (15N) in the sediment. Increased sediment in the water column of the salmon enclosure during the active spawn period indicated salmon-mediated sediment resuspension. A gravelbed response to this water column disturbance was detected via increased sediment infiltration during salmon spawning. This stored sediment was enriched in organic matter and 15N indicating a marine salmon signal. Significant relationships between sediment infiltration and salmon enrichment provided further evidence that salmon organic matter, using resuspended sediment as a vector, was infiltrating into the gravelbed. During the post-spawn period organic sediment was elevated in the water column and gravelbed infiltration was reduced reflecting respectively, the release of decay products from salmon carcasses and MDN release from temporary gravelbed storage. This study demonstrated that localized patterns of sediment deposition are regulated by salmon activity, which control gravelbed MDN storage and release. Salmon-mediated, sediment vector influences on riverine habitat have been quantified here on a small experimental scale, but we expect that the effect is replicated and magnified, as it occurs regionally throughout the spawning grounds, with significant ecosystem implications.

Tracing sources of organic matter in adjacent urban streams having different degrees of channel modification.

PubMed

Duan, Shuiwang; Amon, Rainer M W; Brinkmeyer, Robin L

2014-07-01

Urbanization and stream-channel modifications affect organic matter concentrations and quality in streams, by altering allochthonous organic matter input and in-stream transformation. This study uses multiple tracers (δ(13)C, δ(15)N, C/N ratio, and chlorophyll-a) to track sources of organic matter in two highly urbanized bayous in Houston (Texas, USA). Wastewater treatment plants (WWTPs) are located in headwaters of both bayous and contribute more than 75% to water flow. Low isotopic relatedness to natural end-members and enriched δ(15)N values suggest the influence of WWTPs on the composition of all organic matter fractions. The two bayous differ in degree of channel improvement resulting in different responses to hydrological conditions. During high flow conditions, the influence of terrestrial organic matter and sediment resuspension was much more pronounced in the Buffalo Bayou than in the concrete-lined White Oak Bayou. Particulate organic matter (POM) in White Oak Bayou had similar values of enriched δ(15)N in all subsegments, whereas in Buffalo Bayou, the degree of δ(15)N enrichment was less in the subsegments of the lower watershed. The difference in riparian zone contributions and interactions with sediments/soils was likely responsible for the compositional differences between the two bayous. Phytoplankton inputs were significantly higher in the bayous, especially in slow-flowing sections, relative to the reference sites, and elevated phytoplankton inputs accounted for the observed stable C isotope differences between FPOM and high molecular weight dissolved organic matter (HMW DOM). Relative to POM, HMW DOM in the bayous was similar to WWTP effluents and showed minor longitudinal variability in both streams suggesting that WWTPs contribute much of the DOM in the systems. Urbanization has a major influence on organic matter sources and quality in these urban water bodies and these changes seem further enhanced by stream channel modifications. Copyright © 2014 Elsevier B.V. All rights reserved.

Lake sediments record prehistoric lead pollution related to early copper production in North America.

PubMed

Pompeani, David P; Abbott, Mark B; Steinman, Byron A; Bain, Daniel J

2013-06-04

The mining and use of copper by prehistoric people on Michigan's Keweenaw Peninsula is one of the oldest examples of metalworking. We analyzed the concentration of lead, titanium, magnesium, iron, and organic matter in sediment cores recovered from three lakes located near mine pits to investigate the timing, location, and magnitude of ancient copper mining pollution. Lead concentrations were normalized to lithogenic metals and organic matter to account for processes that can influence natural (or background) lead delivery. Nearly simultaneous lead enrichments occurred at Lake Manganese and Copper Falls Lake ∼8000 and 7000 years before present (yr BP), indicating that copper extraction occurred concurrently in at least two locations on the peninsula. The poor temporal coherence among the lead enrichments from ∼6300 to 5000 yr BP at each lake suggests that the focus of copper mining and annealing shifted through time. In sediment younger than ∼5000 yr BP, lead concentrations remain at background levels at all three lakes, excluding historic lead increases starting ∼150 yr BP. Our work demonstrates that lead emissions associated with both the historic and Old Copper Complex tradition are detectable and can be used to determine the temporal and geographic pattern of metal pollution.

Vertical distribution of potentially toxic elements in sediments impacted by intertidal geothermal hot springs (Bahia Concepcion, Gulf of California)

NASA Astrophysics Data System (ADS)

Leal-Acosta, M. L.; Shumilin, E.

2016-12-01

The intertidal geothermal hot springs (GHS) in Bahia Concepcion, Gulf of California are the source of potentially toxic elements to the adjacent marine environment surrounded by mangroves trees. The anoxic sediments enriched in organic carbon accumulate As, Hg and other heavy metals that can be bioavailable for the biota. To know the vertical distribution of these elements the geochemistry of a short sediment core was carried out. It was collected in June, 2010 in the mangrove area near to GHS (1 m) during a low tide, pushing manually a polypropylene tube into the sediments. The extracted sediment core was cut with plastic knife on 1 cm thick sub-samples, stored in plastic bags and transported on ice to the laboratory. The major and trace elements contents were determinate by ICP-MS after total digestion with stronger acids (HClO4-HNO3-HCl-HF). Certificate reference materials were used for the quality control of the method obtaining good recoveries for most of the elements (80-105%). The sediment core had high maximum contents of CaCO3 (70%) and total organic carbon (12%). The concentration of Hg along the core ranges from 650 to 74300 mg kg-1 and had more than three orders of magnitude above the reference values of 40 mg kg-1 for the Upper Continental Crust (UCC)1. In contrast, As ranges from 12 to 258 mg kg-1 resulting in more than one order of magnitude respect to UCC1 (1.7 mg kg-1). Similar pattern result for Mn, Cu, Pb, and Zn with the maximum values of 3200 mg kg-1, 42 mg kg-1, 12.4 mg kg-1, 71 mg kg-1 respectively that coincide with the maximum for As at the same core depth (4 cm). The Ca, Li, Co, Sb, U, and Mg also show high contents in comparison with the UCC1reference values. The maximum contents of Mo and Cd coincide with maximum concentration of sulfur (2%) at 6 to 8 cm. The enrichment factor calculated using Al as normalizing element showed Cd (7-280), As (26-329) and Hg (23-1196) as highly enriched mainly in the first centimeters of the sediment core. 1 Wedephol (1995)

Terrestrial plant biopolymers in marine sediments

NASA Astrophysics Data System (ADS)

Gough, Mark A.; Fauzi, R.; Mantoura, C.; Preston, Martin

1993-03-01

The vascular land plant biopolymers lignin and cutin were surveyed in the surface sediments of coastal and open ocean waters by controlled alkaline CuO oxidation/reaction. Two contrasting oceanic regimes were studied: the northwest Mediterranean (NWM) Sea, which receives significant particulate terrigenous debris through riverine discharge; and the northeast Atlantic (NEA) Ocean, with poorly characterised terrestrial carbon inputs. In the NWM products of lignin and cutin co-occurred at all stations, elevated levels (ca. 0.5-3.0 mg lignin phenols/100 mg organic carbon; ca. 0.01-0.09 mg cutin acids/100 mg organic carbon) were observed for near-shore deltaic and shelf sediments. The influence of terrestrial land plant inputs extended across the shelf and through the slope to the abyssal plain, providing molecular evidence for advective offshore transfer of terrestrial carbon. Mass balance estimates for the basin suggest riverine inputs account for the majority of surface sedimentary lignin/cutin, most of which (>90%) is deposited on the shelf. Products of CuO oxidation of lignin and cutin were also detected in NEA surface sediments, at levels comparable to those observed for the NWM continental slope, and were detectable at low concentrations ( ca. 0.5 μgg-1 in the sediments of the abyssal plains (>4,000 m depth). While atmospheric deposition of lignin/cutin-derived material cannot be discounted in this open ocean system, lateral advective transfer of enriched shelf sediments is inferred as a possible transport process. A progressive enrichment in cutin-derived material relative to lignin was observed offshore, with evidence of an increase in the degree of oxidative alteration of lignin residues. To account for these observations, preferential offshore transport of finer and more degraded material is proposed. Nonspecific oxidation products dominated the gas chromatograms of NEA sediments, which appear to originate from marine sources of sedimentary organic carbon. Preliminary mass balance calculations applied to the global ocean margin suggest riverine sources of both particulate lignin and cutin are important and that most (>95%) deposition of recognisable land plant biopolymers occurs in shelf seas.

Characteristics of organic carbon accumulation in subtropical seagrass meadows

NASA Astrophysics Data System (ADS)

Tanaya, T.; Watanabe, K.; Yamamoto, S.; Hongo, C.; Kayanne, H.; Kuwae, T.

2016-02-01

The carbon sequestrated in marine ecosystems has been termed "blue carbon", and seagrass meadows are one of the most dominant blue carbon stocks. Globally, the major distribution sites of seagrass meadows are coral reef flats, where it is technically difficult to quantify organic carbon in carbonate sediments. Since blue carbon stocks have been estimated to date based on seagrass biomass and fine sediments (<1 mm), no studies have measured total carbon stocks, including coarse sediments (1> mm) in seagrass meadows. To solve this problem, we developed a new box corer which can facilitate to obtain the intact cores structured by both sediments and seagrass bodies. Using the core samples taken in subtropical seagrass meadows, located off Ishigaki Island, Japan, we measured total organic carbon mass (TOCmass) and stable isotope ratios (δ13C) of total sedimentary organic matter (SOM) and estimated their sources and controlling factors. The averaged TOCmass of top 15 cm SOM including living seagrasses was 940±480 gC/m2. The live seagrass biomass accounted for only 14±14wt%, whereas the dead biomass (>2 mm), coarse sediments (>1 mm except for dead plant structures >2 mm) and fine sediments (<1 mm) accounted for 3±4wt%, 19±13wt%, and 63±14wt%, respectively. The dead biomass and coarse sediments, which have not yet been included in the past estimations, accounted for about 22wt% of the averaged TOCmass. Total organic carbon content (TOC%) of mixture of the dead biomass, coarse sediments and fine sediments increased with increasing the live seagrass biomass (R = 0.66, n = 13, p = 0.014). The live seagrass biomass was one of the controlling factors of blue carbon stocks at the sites. Using a Bayesian isotopic mixing model, we estimated that the contribution of seagrass-derived carbon to total sedimentary organic carbon was about 70%. The enrichment of sediment organic carbon with increasing the live seagrass biomass was mainly due to the increase of seagrass-derived organic carbon. These results suggest that blue carbon stocks can be increased by conservation or restoration of seagrass meadows in subtropical coasts.

Sediment and Nutrient Sources as well as Interspecific Competition Control Growth of 2 Common Species of Coral Reef Macroalgae

NASA Astrophysics Data System (ADS)

Moore, T.; Fong, P.; Cuker, B.

2016-02-01

Aquatic communities worldwide are increasingly subjected to multiple anthropogenic stressors that often result in shifts in structure and function. On coral reefs, human impacts have been associated with phase-shifts from coral to algal domination. We hypothesized that the proliferation of these algal communities, especially on fringing reefs, may be facilitated by human alterations in nutrient enrichment and input of sediments from developed watersheds, which may also influence competitive outcomes among dominant algal species. To evaluate how changes in these abiotic stressors as well as competition may affect the growth of 2 common species of calcifying coral reef algae, Galaxaura fasciculata and Padina boryana, we conducted 3 separate 2 factor mesocosm experiments modeling fringing reefs in Moorea, French Polynesia. In the first experiment, we varied sediment source (marine vs. terrestrial) and water column nutrients (ambient vs. enriched) for each species separately and measured growth after 7 days. While both algae grew faster in enriched compared to ambient nutrients, P. boryana performed best with marine sediment (+27% change in biomass) and G. fasciculata with terrestrial sediment (+14% change in biomass). Next, we varied sediment source (as above) as well as sediment nutrients (ambient/enriched) for each species. While P. boryana lost 44% biomass in the eutrophic terrestrial sediment treatment, G. fasciculata performed the best and gained 19% biomass. Finally, we varied competition (alone/together) and terrestrial sediment nutrients (ambient/enriched). Over the 7 day period, P. boryana lost 64% biomass when in competition with G. fasciculata in the enriched treatment while G. fasciculata gained 38% biomass when in competition with P. boryana in the ambient treatment. These results indicate that, while growth of both species of macroalgae was regulated by nutrients, sediments, and competition, each responded uniquely to these controlling factors.

The impacts of tracer selection and corrections for organic matter and particle size on the results of quantitative sediment fingerprinting. A case study from the Nene basin, UK.

NASA Astrophysics Data System (ADS)

Pulley, Simon; Ian, Foster; Paula, Antunes

2014-05-01

In recent years, sediment fingerprinting methodologies have gained widespread adoption when tracing sediment provenance in geomorphological research. A wide variety of tracers have been employed in the published literature, with corrections for particle size and organic matter applied when the researcher judged them necessary. This paper aims to explore the errors associated with tracer use by a comparison of fingerprinting results obtained using fallout and lithogenic radionuclides, geochemical, and mineral magnetic tracers in a range of environments located in the Nene basin, UK. Specifically, fingerprinting was undertaken on lake, reservoir and floodplain sediment cores, on actively transported suspended sediment and on overbank and channel bed sediment deposits. Tracer groups were investigated both alone and in combination to determine the differences between their sediment provenance predictions and potential causes of these differences. Additionally, simple organic and particle size corrections were applied to determine if they improve the agreement between the tracer group predictions. Key results showed that when fingerprinting contributions from channel banks to actively transported or recently deposited sediments the tracer group predictions varied by 24% on average. These differences could not be clearly attributed to changes in the sediment during erosion or transport. Instead, the most likely cause of differences was the pre-existing spatial variability in tracer concentrations within sediment sources, combined with highly localised erosion. This resulted in the collected sediment source samples not being representative of the actual sediment sources. Average differences in provenance predictions between the different tracer groups in lake, reservoir and floodplain sediment cores were lowest in the reservoir core at 19% and highest in some floodplain cores, with differences in predictions in excess of 50%. In these latter samples organic enrichment of the sediment, selective transport of fine particles and post-depositional chemical changes to the sediment were determined to be the likely cause of the differences. It was determined that organic and particle size corrections made the differences between tracer groups larger in most cases, although differences between tracer group predictions were reduced in two of the four floodplain cores.

Biogeochemical cycling in an organic-rich coastal marine basin. 8. A sulfur isotopic budget balanced by differential diffusion across the sediment-water interface

USGS Publications Warehouse

Chanton, J.P.; Martens, C.S.; Goldhaber, M.B.

1987-01-01

The sulfur isotopic composition of the sulfur fluxes occurring in the anoxic marine sediments of Cape Lookout Bight, N.C., U.S.A., was determined, and the result of isotopic mass balance was obtained via the differential diffusion model. Seasonal pore water sulfate ??34S measurements yielded a calculated sulfate input of 0.6%.. Sulfate transported into the sediments via diffusion appeared to be enriched in the lighter isotope because its concentration gradient was steeper, due to the increase in the measured isotopic composition of sulfate with depth. Similarly, the back diffusion of dissolved sulfide towards the sediment-water interface appeared enriched in the heavier isotope. The isotopic composition of this flux was calculated from measurements of the ??34S of dissolved sulfide and was determined to be 15.9%.. The isotopic composition of buried sulfide was determined to be -5.2%. and the detrital sulfur input was estimated to be -6.2%.. An isotope mass balance equation based upon the fluxes at the sediment-water interface successfully predicted the isotopic composition of the buried sulfur flux within 0.5%., thus confirming that isotopes diffuse in response to their individual concentration gradients. ?? 1987.

Assessment of heavy metal contamination in the sediments of Nansihu Lake Catchment, China.

PubMed

Liu, Enfeng; Shen, Ji; Yang, Liyuan; Zhang, Enlou; Meng, Xianghua; Wang, Jianjun

2010-02-01

At present, anthropogenic contribution of heavy metals far exceeds natural input in some aquatic sediment, but the proportions are difficult to differentiate due to the changes in sediment characters. In this paper, the metal (Al, Fe, K, Mg, Ca, Cr, Cu, Ni, and Zn) concentrations, grain size, and total organic carbon (TOC) content in the surface and core sediments of Nansihu Lake Catchment (the open lake and six inflow rivers) were determined. The chemical speciations of the metals (Al, Fe, Cr, Cu, Ni, and Zn) in the surface sediments were also analyzed. Approaches of factor analysis, normalized enrichment factor (EF) and the new non-residual fractions enrichment factor (K(NRF)) were used to differentiate the sources of the metals in the sediments, from detrital clastic debris or anthropogenic input, and to quantify the anthropogenic contamination. The results indicate that natural processes were more dominant in concentrating the metals in the surface and core sediments of the open lake. High concentration of Ca and deficiency of other metals in the upper layers of the sediment core were attributed to the input of carbonate minerals in the catchment with increasing human activities since 1980s. High TOC content magnified the deficiency of the metals. Nevertheless, the EF and K(NRF) both reveal moderate to significant anthropogenic contamination of Cr, Cu, Ni, and Zn in the surface sediments of Laoyun River and the estuary and Cr in the surface sediments of Baima River. The proportion of non-residual fractions (acid soluble, reducible, and oxidizable fractions) of Cr, Cu, Ni, and Zn in the contaminated sediments increased to 37-99% from the background levels less than 30%.

Enrichment and characterization of sulfate reducing, naphthalene degrading microorganisms

NASA Astrophysics Data System (ADS)

Steffen, Kümmel; Florian-Alexander, Herbst; Márcia, Duarte; Dietmar, Pieper; Jana, Seifert; Bergen Martin, von; Hans-Hermann, Richnow; Carsten, Vogt

2014-05-01

Polycyclic aromatic hydrocarbons (PAH) are pollutants of great concern due to their potential toxicity, mutagenicity and carcinogenicity. PAH are widely distributed in the environment by accidental discharges during the transport, use and disposal of petroleum products, and during forest and grass fires. Caused by their hydrophobic nature, PAH basically accumulate in sediments from where they are slowly released into the groundwater. Although generally limited by the low water solubility of PAH, microbial degradation is one of the major mechanisms leading to the complete clean-up of PAH-contaminated sites. Whereas organisms and biochemical pathways responsible for the aerobic breakdown of PAH are well known, anaerobic PAH biodegradation is less understood; only a few anaerobic PAH degrading cultures have been described. We studied the anaerobic PAH degradation in a microcosm approach to enrich anaerobic PAH degraders. Anoxic groundwater and sediment samples were used as inoculum. Groundwater samples were purchased from the erstwhile gas works facility and a former wood impregnation site. In contrast, sources of sediment samples were a former coal refining area and an old fuel depot. Samples were incubated in anoxic mineral salt medium with naphthalene as sole carbon source and sulfate as terminal electron acceptor. Grown cultures were characterized by feeding with 13C-labeled naphthalene, 16S rRNA gene sequencing using an Illumina® approach, and functional proteome analyses. Finally, six enrichment cultures able to degrade naphthalene under anoxic conditions were established. First results point to a dominance of identified sequences affiliated to the freshwater sulfate-reducing strain N47, which is a known anaerobic naphthalene degrader, in four out of the six enrichments. In those enrichments, peptides related to the pathway of anoxic naphthalene degradation in N47 were abundant. Overall the data underlines the importance of Desulfobacteria for natural attenuation of environmental contaminants. Understanding of diversity and physiology of anaerobic PAH degradation will contribute to remediation efforts of low-oxygen environments such as aquifers or river sediments.

Isolation and Physiological Characterization of Psychrophilic Denitrifying Bacteria from Permanently Cold Arctic Fjord Sediments (Svalbard, Norway)

NASA Technical Reports Server (NTRS)

Canion, Andy; Prakash, Om; Green, Stefan J.; Jahnke, Linda; Kuypers, Marcel M. M.; Kostka, Joel E.

2013-01-01

A large proportion of reactive nitrogen loss from polar sediments is mediated by denitrification, but microorganisms mediating denitrification in polar environments remain poorly characterized. A combined approach of most-probable-number (MPN) enumeration, cultivation and physiological characterization was used to describe psychrophilic denitrifying bacterial communities in sediments of three Arctic fjords in Svalbard (Norway). A MPN assay showed the presence of 10(sup 3)-10(sup 6) cells of psychrophilic nitrate-respiring bacteria g(sup -1) of sediment. Fifteen strains within the Proteobacteria were isolated using a systematic enrichment approach with organic acids as electron donors and nitrate as an electron acceptor. Isolates belonged to five genera, including Shewanella, Pseudomonas, Psychromonas (Gammaproteobacteria), Arcobacter (Epsilonproteobacteria) and Herminiimonas (Betaproteobacteria). All isolates were denitrifiers, except Shewanella, which exhibited the capacity for dissimilatory nitrate reduction to ammonium (DNRA). Growth from 0 to 40 degC demonstrated that all genera except Shewanella were psychrophiles with optimal growth below 15 degC, and adaptation to low temperature was demonstrated as a shift from primarily C16:0 saturated fatty acids to C16:1 monounsaturated fatty acids at lower temperatures. This study provides the first targeted enrichment and characterization of psychrophilic denitrifying bacteria from polar sediments, and two genera, Arcobacter and Herminiimonas, are isolated for the first time from permanently cold marine sediments.

Process based modelling of soil organic carbon redistribution on landscape scale

NASA Astrophysics Data System (ADS)

Schindewolf, Marcus; Seher, Wiebke; Amorim, Amorim S. S.; Maeso, Daniel L.; Jürgen, Schmidt

2014-05-01

Recent studies have pointed out the great importance of erosion processes in global carbon cycling. Continuous erosion leads to a massive loss of top soils including the loss of organic carbon accumulated over long time in the soil humus fraction. Lal (2003) estimates that 20% of the organic carbon eroded with top soils is emitted into atmosphere, due to aggregate breakdown and carbon mineralization during transport by surface runoff. Furthermore soil erosion causes a progressive decrease of natural soil fertility, since cation exchange capacity is associated with organic colloids. As a consequence the ability of soils to accumulate organic carbon is reduced proportionately to the drop in soil productivity. The colluvial organic carbon might be protected from further degradation depending on the depth of the colluvial cover and local decomposing conditions. Some colluvial sites can act as long-term sinks for organic carbon. The erosional transport of organic carbon may have an effect on the global carbon budget, however, it is uncertain, whether erosion is a sink or a source for carbon in the atmosphere. Another part of eroded soils and organic carbon will enter surface water bodies and might be transported over long distances. These sediments might be deposited in the riparian zones of river networks. Erosional losses of organic carbon will not pass over into atmosphere for the most part. But soil erosion limits substantially the potential of soils to sequester atmospheric CO2 by generating humus. The present study refers to lateral carbon flux modelling on landscape scale using the process based EROSION 3D soil loss simulation model, using existing parameter values. The selective nature of soil erosion results in a preferentially transport of fine particles while less carbonic larger particles remain on site. Consequently organic carbon is enriched in the eroded sediment compared to the origin soil. For this reason it is essential that EROSION 3D provides the grain size distribution (clay, silt and sand) of the transported sediment. A test slope is modeled covering certain land use and soil management scenarios referring to different rainfall events. Results allow first insights on carbon loss and depletion on sediment delivery areas as well as carbon gains and enrichments on deposition areas on landscape scale. Lal, R. (2003). Soil erosion and the global carbon budget. Environment International vol. 29: 437-450.

Geochemical assessment of heavy metals pollution in surface sediments of Vellar and Coleroon estuaries, southeast coast of India.

PubMed

Nethaji, S; Kalaivanan, R; Arya Viswam; Jayaprakash, M

2017-02-15

Surface sediments were collected from Vellar and Coleroon estuaries for determine sediment texture, calcium carbonate, organic matter and heavy metals. Pollution indices such as pollution load index (PLI), contamination factor (CF), enrichment factor (EF) and geo-accumulation index (I geo ) were done for this study to know the level of heavy metals pollution in the estuarine ecosystem. Pearson correlation matrix and factor were used to assess the relationship and source of heavy metals in the estuarine sediments. The results of PLI values reveal that the study area was polluted by all the heavy metals. The calculated values of CF and I geo followed the decreasing order Cu>Ni>Pb>Co>Cr>Zn>Mn>Fe and illustrate that Cu, Ni and Pb are contaminated due to anthropogenic sources in both estuaries. Correlation and factor analysis suggest that FeMn oxyhydroxides, organic matter and fine particles are responsible for high concentration of heavy metals. Copyright © 2016 Elsevier Ltd. All rights reserved.

Distribution and environmental assessment of trace elements contamination of water, sediments and flora from Douro River estuary, Portugal.

PubMed

Ribeiro, C; Couto, C; Ribeiro, A R; Maia, A S; Santos, M; Tiritan, M E; Pinto, E; Almeida, A A

2018-10-15

The present study evaluated the content and distribution of several trace elements (Li, Be, Al, V, Cr, Co, Ni, Cu, Zn, Se, Mo, Ag, Cd, Sb, Ba, Tl, Pb, and U) in the Douro River estuary. For that, three matrices were collected (water, sediments and native local flora) to assess the extent of contamination by these elements in this estuarine ecosystem. Results showed their occurrence in estuarine water and sediments, but significant differences were recorded on the concentration levels and pattern of distribution among both matrices and sampling points. Generally, the levels of trace elements were higher in the sediments than in the respective estuarine water. Nonetheless, no correlation among trace elements was determined between water and sediments, except for Cd. Al was the trace element found at highest concentration at both sediments and water followed by Zn. Pollution indices such as geo-accumulation (I geo ), enrichment factor (EF) and contamination factor (CF) were determined to understand the levels and sources of trace elements pollution. I geo showed strong contamination by anthropogenic activities for Li, Al, V, Cr, Ni, Cu, Zn, Ba and Pb at all sampling points while EF and CF demonstrated severe enrichment and contamination by Se, Sb and Pb. Levels of trace elements were compared to acceptable values for aquatic organisms and Sediment Quality Guidelines. The concentration of some trace elements, namely Al, Pb and Cu, were higher than those considered acceptable, with potential negative impact on local living organisms. Nevertheless, permissible values for all trace elements are still not available, demonstrating that further studies are needed in order to have a complete assessment of environmental risk. Furthermore, the occurrence and possible accumulation of trace elements by local plant species and macroalgae were investigated as well as their potential use as bioindicators of local pollution and for phytoremediation purposes. Copyright © 2018 Elsevier B.V. All rights reserved.

The geochemical proxies for the eutrophic and hypoxia in the Changjiang estuary: evidence from sedimentary records

NASA Astrophysics Data System (ADS)

Xuwen, F.

2013-12-01

Three cores were selected in the Changjiang Estuary to study potential hundrend-years eutrophication and hypoxia. The sediment record in the Changjiang Estuary mud area (CEMA) within the region of pronounced hypoxia showed that an increase in TOC (21%), biomarkers (141%) and δ13 Corg (1.6‰PDB ) occurred since 1950s and a marked increase since 1970s. Some redox sensitive elements (RSEs) have been enriched significantly since the late 1960s to 1970s, the rates of Mo/Al, Cd/Al and As/Al increased about 83%, 73% and 50% respectively. And the contents of some biogenic elements also increased since the late 1960s, e.g. Ca(129%), Sr(65%) and P(38%) respectively. For the core sediment in the Cheju Island mud area (SCIMA) outside the hypoxia region, the organic geochemical indicators (TOC, biomarkers and δ13Corg ) increased in difference degrees before 1950s~1970s and then were almost the constant. The RSEs were controlled by 'grain size effects' which indicated no hypoxia occurred. For the core sediment in the Zhejiang coastal mud area (ZCMA) within the region of milder hypoxia, the distribution of biomarkers is highly similar to the CEMA, but the other indictactors such as δ13 Corg et al.were different from the above two cores. Productivity in the SCIMA have been mainly influenced by climate ocean circulation changes over the last 100 years. Productivities in the hypoxia areas were corresponding with the fertilizer consumption and high nutrient inputs from the Changjiang River, which stimulated the algae (e g. brassicasterol, dinosterol) blooming and resulted an enrichment of organic matter. Hypoxia invoked organic matter preserved in the sediment. This study concluded that biomarkers in sediment could be as the eutrophic proxies in the Changjiang Estuary and its adjacent region, and δ13 Corg, RSEs and biogenic elements could be as the proxies to trace or reconstruct history of eutrophication and hypoxia in the CEMA.

An isotopic study of biogeochemical relationships between carbonates and organic carbon in the Greenhorn Formation

NASA Technical Reports Server (NTRS)

Hayes, J. M.; Popp, Brian N.; Takigiku, Ray; Johnson, Marcus W.

1989-01-01

Carbon-isotopic compositions of total carbonate, inoceramid carbonate, micritic carbonate, secondary cements, total organic carbon, and geoporphyrins have been measured in 76 different beds within a 17-m interval of a core through the Greenhorn Formation, an interbedded limestone and calcareous shale unit of Cretaceous age from the Western Interior Seaway of North America. Results are considered in terms of variations in the processes of primary production and in secondary processes. It is shown that the porphyrin isotopic record reflects primary isotopic variations more closely than the TOC isotopic record and that, in these sediments, TOC is enriched in C-13 relative to its primary precursor by 0.6 to 2.8 percent. This enrichment is attributed to isotope effects within the consumer foodweb and is associated with respiratory heterotrophy. Variation in this secondary enrichment are correlated with variations in the isotopic composition of marine carbonate.

Quantitative geochemical modeling along a transect off Peru: Carbon cycling in time and space, and the triggering factors for carbon loss and storage

NASA Astrophysics Data System (ADS)

Arning, Esther T.; van Berk, Wolfgang; Schulz, Hans-Martin

2012-12-01

Early diagenetic processes in Peruvian shelf and slope sediments are numerically reproduced by applying chemical thermodynamics in a complex, universal approach using the PHREEQC (version 2) computer code. The reaction kinetics of organic carbon remineralization are integrated into a set of equilibrium reactions by defining the type and the amount of converted organic matter in a certain time step. We calculate the most intense remineralization of organic carbon for present-day shelf sites, and the final carbon pool is dominated by secondary carbonates. This serves to highlight the influence of organic matter degradation and anaerobic oxidation of methane (AOM) on diagenetic mineral formation. The enrichment of aqueous methane and the formation of methane hydrate only takes place in slope sediments with high sedimentation rates that prevent diffusive loss of methane (e.g., Sites 682 and 688). Moreover, AOM prevents the diffusion of dissolved methane into overlying seawater. Throughout the Miocene period, these sites were located on a former shelf and the total carbon loss from the sediments was significantly higher in comparison with the present-day. Compared with the present-day shelf site, organic matter remineralization is high, and methane is produced but not stored within the sediments. Our model calculations rule out the possibility of present-day and former shelf site sediments off the coast of Peru as methane reservoirs. Remineralized TOC has to be considered, particularly in older sediments, when interpreting TOC profiles and calculating mass accumulation rates of total organic carbon (MARTOC). The more organic matter has been remineralized during the depositional history, the larger the difference between MARTOC calculated from measured TOC data, and from the sum of modeled and measured TOC data. Consequently, most reliable primary productivity calculations are based on the sum of measured relict TOC and the amount of remineralized organic carbon determined by modeling.

Importance of seagrass as a carbon source for heterotrophic bacteria in a subtropical estuary (Florida Bay)

NASA Astrophysics Data System (ADS)

Williams, Clayton J.; Jaffé, Rudolf; Anderson, William T.; Jochem, Frank J.

2009-11-01

A stable carbon isotope approach was taken to identify potential organic matter sources incorporated into biomass by the heterotrophic bacterial community of Florida Bay, a subtropical estuary with a recent history of seagrass loss and phytoplankton blooms. To gain a more complete understanding of bacterial carbon cycling in seagrass estuaries, this study focused on the importance of seagrass-derived organic matter to pelagic, seagrass epiphytic, and sediment surface bacteria. Particulate organic matter (POM), seagrass epiphytic, seagrass ( Thalassia testudinum) leaf, and sediment surface samples were collected from four Florida Bay locations with historically different organic matter inputs, macrophyte densities, and primary productivities. Bulk (observed and those reported previously) and compound-specific bacterial fatty acid δ 13C values were used to determine important carbon sources to the estuary and benthic and pelagic heterotrophic bacteria. The δ 13C values of T. testudinum green leaves with epiphytes removed ranged from -9.9 to -6.9‰. Thalassia testudinum δ 13C values were significant more enriched in 13C than POM, epiphytic, and sediment samples, which ranged from -16.4 to -13.5, -16.2 to -9.6, and -16.7 to -11.0‰, respectively. Bacterial fatty acid δ 13C values (measured for br14:0, 15:0, i15:0, a15:0, br17:0, and 17:0) ranged from -25.5 to -8.2‰. Assuming a -3‰ carbon source fractionation from fatty acid to whole bacteria, pelagic, epiphytic, and sediment bacterial δ 13C values were generally more depleted in 13C than T. testudinum δ 13C values, more enriched in 13C than reported δ 13C values for mangroves, and similar to reported δ 13C values for algae. IsoSource mixing model results indicated that organic matter derived from T. testudinum was incorporated by both benthic and pelagic bacterial communities, where 13-67% of bacterial δ 13C values could arise from consumption of seagrass-derived organic matter. The IsoSource model, however, failed to discriminate clearly the fraction of algal (0-86%) and mangrove (0-42%) organic matter incorporated by bacterial communities. These results indicate that pelagic, epiphytic, and sediment surface bacteria consumed organic matter from a variety of sources. Bacterial communities incorporated consistently seagrass-derived organic matter, the dominant macrophyte in Florida Bay, but seagrass δ 13C values alone could not account fully for bacterial δ 13C values.

Enriching Metal-Oxidizing Microbes from Marine Sediment on Cathodic Currents

NASA Astrophysics Data System (ADS)

Rowe, A. R.; Nealson, K. H.

2013-12-01

The ability of organisms to transfer electrons to and from substrates outside the cell is reshaping the way we look at microbial respiration. While this process, termed extracellular electron transport (EET), has been described in a number of metal reducing organisms, current evidence suggests that this process is widespread in nature and across physiologies. Additionally, it has been speculated that these previously overlooked electrochemical interactions may play an important role in global biogeochemical cycles. Requirements for EET could play a role in why the ';uncultured majority' have so far been resistant to culturing. As such, we are currently developing culturing techniques to target microbes capable of utilizing insoluble electron acceptors utilizing electrochemical techniques. Microbe-electrode interactions are analogous to the reactions that occur between microbes and minerals and may provide an apt way to mimic the environmental conditions (i.e., insoluble electron donor/acceptor at specific redox potentials) required for culturing specialized or EET dependent metabolisms. It has been previously demonstrated that aquatic sediments are capable of utilizing anodes as electron acceptors, thereby generating a current. While, it is known that microbes utilize electrons from a cathode for the reduction of different metals and oxygen in microbial fuel cells, currently there are no reports of environmental enrichments of microbes using cathodes. Replicate microcosms from marine sediments (sampled from Catalina Harbor, California) were incubated with ITO plated glass electrodes. Negative current production at -400mV (vs. Ag/AgCl reference electrodes) potentials was sustained for four weeks. Secondary enrichments were then constructed using the cathode as the primary electron source and a variety of anaerobic terminal electron acceptors--Nitrate, Fe3+, and SO42-. Positive current was maintained in enrichment cultures (compared to abiotic control containing terminal electron acceptors. Batch feeds of different electron donors resulted in a spike in electric current over a 24 hour period of time. Two subsequent enrichment cultures have been phylogenetically characterized that were supplied solely with elemental sulfur (So) as an electron donor, and either nitrate, δ-MnO2 or Fe3+ as the terminal electron acceptor. Current efforts are geared towards isolating currently iron-oxidizing and sulfur-oxidizing lithotrophs.

Locomotion speed of the benthic foraminifer Ammonia tepida exposed to different nitrogen and carbon sources

NASA Astrophysics Data System (ADS)

Jauffrais, Thierry; Jesus, Bruno; Geslin, Emmanuelle; Briand, Floriane; Jézéquel, Véronique Martin

2016-12-01

Ammonia tepida is a dominant benthic foraminifer colonizing intertidal mudflat sediments. Horizontal locomotion speeds were monitored using time-lapse image analysis over 6 and 24 h. Experimental conditions were based on foraminifera exposed to dry sediment re-suspended in artificial sea water (ASW) without any nutrient addition (condition DS), to combusted sediment re-suspended in in ASW also without any nutrient addition (condition CS), or to combusted sediment re-suspended in ASW enriched with either: nitrate, urea, glucose, soil extract (SE), extracellular polymeric substances (EPS), benthic diatoms (Entomoneis paludosa) or natural microphytobenthic assemblages (MPB). Significant differences were already measured after 6 h between A. tepida mean locomotion speeds at the different experimental conditions. However, differences were clearer after 24 h where the slowest A. tepida mean locomotion speed was measured in specimens placed in CS (1.00 ± 0.30 mm h- 1) and the highest mean locomotion speed in DS (2.99 ± 0.22 mm h- 1). Three different groups were defined according to their locomotion speed, (1) foraminifera exposed to DS had a locomotion speed significantly higher than all other conditions, (2) foraminifera placed in conditions enriched in SE, Glucose, Urea and EPS had intermediary locomotion speeds (1.8-2.5 mm h- 1), and (3) conditions with foraminifera showing the lowest locomotion speeds (1-1.6 mm h- 1) were CS, nitrate, MPB and E. paludosa. Thus, foraminifera exposed to organic matter (DS, SE, Glucose and Urea) showed faster locomotion speeds than foraminifera exposed to inorganic matter (CS, nitrate) or live preys (E. paludosa, MPB). Dissolved organic matter enrichment enhanced foraminifera locomotion speed, which might be a behavioural response to satisfy their carbon and/or nitrogen requirements, and the lowest locomotion speed observed when feeding on live preys might be a consequence of longer time required for live prey phagocytosis.

Trace metal in sediment from a deep-sea floor of Makassar Strait

NASA Astrophysics Data System (ADS)

Budianto, F.; Lestari

2018-02-01

Makassar Strait is located in the entrance of Indonesian Through Flow (ITF). However, the geochemistry of metals in sediment within Makassar Strait remains unexplored. The aim of this study was to measure the concentration of metals in sediment and to assess the sediment quality based on those metals concentrations. The sediment was collected from 632-4730 m in depth using giant piston corer on R/V Baruna Jaya VIII in December 2014. In each observation point, three layers of sediment were sub-sampled from the core i.e. surface layer (0-5 cm), middle layer (45-55 cm) and bottom layer. The metals were analyzed using acid digestion procedure followed by Atomic Absorption Spectrophotometer. The result indicated that the metal has spatially insignificant differences in sediment and the increase of metal concentration by depth was noticed. The Enrichment factor presented as no enrichment to minor enrichment of metal in sediment.

Rare earth element geochemistry characteristics of seawater and porewater from deep sea in western Pacific.

PubMed

Deng, Yinan; Ren, Jiangbo; Guo, Qingjun; Cao, Jun; Wang, Haifeng; Liu, Chenhui

2017-11-28

Deep-sea sediments contain high concentrations of rare earth element (REE) which have been regarded as a huge potential resource. Understanding the marine REE cycle is important to reveal the mechanism of REE enrichment. In order to determine the geochemistry characteristics and migration processes of REE, seawater, porewater and sediment samples were systematically collected from the western Pacific for REE analysis. The results show a relatively flat REE pattern and the HREE (Heavy REE) enrichment in surface and deep seawater respectively. The HREE enrichment distribution patterns, low concentrations of Mn and Fe and negative Ce anomaly occur in the porewater, and high Mn/Al ratios and low U concentrations were observed in sediment, indicating oxic condition. LREE (Light REE) and MREE (Middle REE) enrichment in upper layer and depletion of MREE in deeper layer were shown in porewater profile. This study suggests that porewater flux in the western Pacific basin is a minor source of REEs to seawater, and abundant REEs are enriched in sediments, which is mainly caused by the extensive oxic condition, low sedimentation rate and strong adsorption capacity of sediments. Hence, the removal of REEs of porewater may result in widespread REE-rich sediments in the western Pacific basin.

Comparison of organic geochemistry and metal enrichment in two black shales: Cambrian Alum Shale of Sweden and Devonian Chattanooga Shale of United States

USGS Publications Warehouse

Leventhal, J.S.

1991-01-01

In most black shales, such as the Chattanooga Shale and related shales of the eastern interior United States, increased metal and metalloid contents are generally related to increased organic carbon content, decreased sedimentation rate, organic matter type, or position in the basin. In areas where the stratigraphic equivalents of the Chattanooga Shale are deeply buried and and the organic material is thermally mature, metal contents are essentially the same as in unheated areas and correlate with organic C or S contents. This paradigm does not hold for the Cambrian Alum Shale Formation of Sweden where increased metal content does not necessarily correlate with organic matter content nor is metal enrichment necessarily related to land derived humic material because this organic matter is all of marine source. In southcentral Sweden the elements U, Mo, V, Ni, Zn, Cd and Pb are all enriched relative to average black shales but only U and Mo correlate to organic matter content. Tectonically disturbed and metamorphosed allochthonous samples of Alum Shale on the Caledonian front in western Sweden have even higher amounts for some metals (V, Ni, Zn and Ba) relative to the autochthonous shales in this area and those in southern Sweden. ?? 1991 Springer-Verlag.

Pharmaceutical chemicals, steroids and xenoestrogens in water, sediments and fish from the tidal freshwater Potomac River (Virginia, USA).

PubMed

Arya, Golala; Tadayon, Sara; Sadighian, James; Jones, Jennifer; de Mutsert, Kim; Huff, Thomas B; Foster, Gregory D

2017-06-07

Selected pharmaceutical chemicals, steroids and xenoestrogens (PCSXs) consisting of 29 endocrine modulators, therapeutic drugs, pesticides, detergents, plastics, and active ingredients in household products were measured in water, riverbed sediments and fish collected in a tributary embayment of the Potomac River (Hunting Creek, Alexandria, VA, USA) in the vicinity of wastewater discharge. A total of 17 PCSXs were found in the Hunting Creek samples, with steroid hormones (e.g., progesterone and 17α-ethinylestradiol), triclosan, dextromethorphan and bisphenol A being the most prominent micropollutants detected.The geospatial distribution of the PCSXs in Hunting Creek indicated that the steroids correlated with wastewater treatment plant discharge in all matrices, but such an association is tentative in Hunting Creek given the complex nature of urban sources of PCSXs and hydrodynamics in an urban tidal river. The sediment PCSX concentrations correlated with sediment total organic carbon content at all sampling sites. For the most part, the PCSXs showed an enrichment in fish tissue relative to sediments when concentrations were normalized to lipids and sediment organic carbon contents, but the influence of endogenous steroids is also an important consideration for these chemicals.

Ecological Functioning in Two Mid-Atlantic Bight Submarine Canyons: Macrofauna Community Trends and the Role of Canyon Specific Processes

NASA Astrophysics Data System (ADS)

Robertson, C.; Bourque, J. R.; Davies, A. J.; Duineveld, G.; Mienis, F.; Brooke, S.; Ross, S. W.; Demopoulos, A. W.

2016-02-01

Submarine canyons are complex systems, acting as major conduits of organic matter along continental shelves and promoting gradients in food resources, turbidity flows, habitat heterogeneity, and areas of sediment resuspension and deposition. In the western North Atlantic, a large multidisciplinary program was conducted in two major Mid-Atlantic Bight (MAB) canyons (Baltimore and Norfolk canyons). This Atlantic Deepwater Canyons project was funded by BOEM, NOAA, and USGS. Here we investigate the `canyon effect' on benthic ecosystem ecology and functioning of two canyon systems by defining canyon specific processes influencing MAB shelf benthic community trends. Sediment cores were collected in 2012 and 2013 with a NIOZ box corer along the main axes ( 180-1200m) of Baltimore and Norfolk Canyon and at comparable depths on the adjacent continental slope. Whole community macrofaunal (>300 μm) abundance and biomass data provided insight into community trends across depth and biogeochemical gradients by coupling diversity metrics and biological trait analyses with sediment biogeochemistry and hydrodynamic data. The canyons exhibited clear differences in sediment profiles, hydrodynamic regimes and enrichment depocenters as well as significantly distinct infauna communities. Interestingly, both canyons showed bimodal distributions in abundances and diversity of infauna and a shallowing of species maxima which was not present on adjacent slopes. We hypothesize that physical canyon processes are important regulators in the depth of observed species maxima and community functioning on the MAB shelf, on local and regional scales. Unique sediment dynamics, organic enrichment, and hydrographic conditions were significant factors in structuring benthic community differences in MAB canyons The study provides a complete benthic infaunal appraisal of two canyon systems in the western Atlantic, incorporating biogeochemistry and oceanography to increase our understanding of canyon ecosystem ecology and provide baseline information on canyon functioning.

Risk assessment and driving factors for artificial topography on element heterogeneity: Case study at Jiangsu, China.

PubMed

Hong, Hualong; Dai, Minyue; Lu, Haoliang; Liu, Jingchun; Zhang, Jie; Yan, Chongling

2018-02-01

The rapid expansion of construction related to coastal development evokes great concern about environmental risks. Recent attention has been focused mainly on factors related to the effects of waterlogging, but there is urgent need to address the potential hazard caused by artificial topography: derived changes in the elemental composition of the sediments. To reveal possible mechanisms and to assess the environmental risks of artificial topography on transition of elemental composition in the sediment at adjoining zones, a nest-random effects-combined investigation was carried out around a semi-open seawall. The results implied great changes induced by artificial topography. Not only did artificial topography alter the sediment elemental composition at sites under the effect of artificial topography, but also caused a coupling pattern transition of elements S and Cd. The biogeochemical processes associated with S were also important, as suggested by cluster analysis. The geo-accumulation index shows that artificial topography triggered the accumulation of C, N, S, Cu, Fe, Mn, Zn, Ni, Cr, Pb, As and Cd, and increased the pollution risk of C, N, S, Cu, As and Cd. Enrichment factors reveal that artificial topography is a new type of human-activity-derived Cu contamination. The heavy metal Cu was notably promoted on both the geo-accumulation index and the enrichment factor under the influence of artificial topography. Further analysis showed that the Cu content in the sediment could be fitted using equations for Al and organic carbon, which represented clay mineral sedimentation and organic matter accumulation, respectively. Copper could be a reliable indicator of environmental degradation caused by artificial topography. Copyright © 2017 Elsevier Ltd. All rights reserved.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gough, M.A.; Fauzi, R.; Mantoura, C.

The vascular land plant biopolymers lignin and cutin were surveyed in the surface sediments of coastal and open ocean waters by controlled alkaline CuO oxidation/reaction. Two contrasting oceanic regimes were studied: the northwest Mediterranean (NWM) Sea, which receives significant particulate terrigenous debris through riverine discharge; and the northeast Atlantic (NEA) Ocean, with poorly characterized terrestrial carbon inputs. In the NWM products of lignin and cutin co-occurred at all stations, elevated levels (ca. 0.5-3.0 mg lignin phenols/100 mg organic carbon; ca. 0.01-0.09 mg cutin acids/100 mg organic carbon) were observed for near-shore deltaic and shelf sediments. The influence of terrestrial landmore » plant inputs extended across the shelf and through the slope to the abyssal plain, providing molecular evidence for advective offshore transfer of terrestrial carbon. Mass balance estimates for the basin suggest riverine inputs account for the majority of surface sedimentary ligin/cutin, most of which (>90%) is deposited on the shelf. Products of CuO oxidation of lignin and cutin were also detected in NEA surface sediments, at levels comparable to those observed for the NWM continental slope, and were detectable at low concentrations in the sediments of the abyssal plains (>4,000 m depth). While atmospheric deposition of lignin/cutin-derived material cannot be discounted in this open ocean system, lateral advective transfer of enriched shelf sediments is inferred as a possible transport process. A progressive enrichment in cutin-derived material relative to lignin was observed offshore, with evidence of an increase in the degree of oxidative alteration of lignin residues. Preliminary mass balance calculations applied to the global ocean margin suggest riverine sources of both particulate lignin and cutin are important and that most (>95%) deposition of recognizable land plant biopolymers occurs in shelf seas. 74 refs., 7 figs., 5 tabs.« less

Polychaete richness and abundance enhanced in anthropogenically modified estuaries despite high concentrations of toxic contaminants.

PubMed

Dafforn, Katherine A; Kelaher, Brendan P; Simpson, Stuart L; Coleman, Melinda A; Hutchings, Pat A; Clark, Graeme F; Knott, Nathan A; Doblin, Martina A; Johnston, Emma L

2013-01-01

Ecological communities are increasingly exposed to multiple chemical and physical stressors, but distinguishing anthropogenic impacts from other environmental drivers remains challenging. Rarely are multiple stressors investigated in replicated studies over large spatial scales (>1000 kms) or supported with manipulations that are necessary to interpret ecological patterns. We measured the composition of sediment infaunal communities in relation to anthropogenic and natural stressors at multiple sites within seven estuaries. We observed increases in the richness and abundance of polychaete worms in heavily modified estuaries with severe metal contamination, but no changes in the diversity or abundance of other taxa. Estuaries in which toxic contaminants were elevated also showed evidence of organic enrichment. We hypothesised that the observed response of polychaetes was not a 'positive' response to toxic contamination or a reduction in biotic competition, but due to high levels of nutrients in heavily modified estuaries driving productivity in the water column and enriching the sediment over large spatial scales. We deployed defaunated field-collected sediments from the surveyed estuaries in a small scale experiment, but observed no effects of sediment characteristics (toxic or enriching). Furthermore, invertebrate recruitment instead reflected the low diversity and abundance observed during field surveys of this relatively 'pristine' estuary. This suggests that differences observed in the survey are not a direct consequence of sediment characteristics (even severe metal contamination) but are related to parameters that covary with estuary modification such as enhanced productivity from nutrient inputs and the diversity of the local species pool. This has implications for the interpretation of diversity measures in large-scale monitoring studies in which the observed patterns may be strongly influenced by many factors that covary with anthropogenic modification.

Polychaete Richness and Abundance Enhanced in Anthropogenically Modified Estuaries Despite High Concentrations of Toxic Contaminants

PubMed Central

Dafforn, Katherine A.; Kelaher, Brendan P.; Simpson, Stuart L.; Coleman, Melinda A.; Hutchings, Pat A.; Clark, Graeme F.; Knott, Nathan A.; Doblin, Martina A.; Johnston, Emma L.

2013-01-01

Ecological communities are increasingly exposed to multiple chemical and physical stressors, but distinguishing anthropogenic impacts from other environmental drivers remains challenging. Rarely are multiple stressors investigated in replicated studies over large spatial scales (>1000 kms) or supported with manipulations that are necessary to interpret ecological patterns. We measured the composition of sediment infaunal communities in relation to anthropogenic and natural stressors at multiple sites within seven estuaries. We observed increases in the richness and abundance of polychaete worms in heavily modified estuaries with severe metal contamination, but no changes in the diversity or abundance of other taxa. Estuaries in which toxic contaminants were elevated also showed evidence of organic enrichment. We hypothesised that the observed response of polychaetes was not a ‘positive’ response to toxic contamination or a reduction in biotic competition, but due to high levels of nutrients in heavily modified estuaries driving productivity in the water column and enriching the sediment over large spatial scales. We deployed defaunated field-collected sediments from the surveyed estuaries in a small scale experiment, but observed no effects of sediment characteristics (toxic or enriching). Furthermore, invertebrate recruitment instead reflected the low diversity and abundance observed during field surveys of this relatively ‘pristine’ estuary. This suggests that differences observed in the survey are not a direct consequence of sediment characteristics (even severe metal contamination) but are related to parameters that covary with estuary modification such as enhanced productivity from nutrient inputs and the diversity of the local species pool. This has implications for the interpretation of diversity measures in large-scale monitoring studies in which the observed patterns may be strongly influenced by many factors that covary with anthropogenic modification. PMID:24098816

Vertical profile, contamination assessment, and source apportionment of heavy metals in sediment cores of Kaohsiung Harbor, Taiwan.

PubMed

Chen, Chih-Feng; Ju, Yun-Ru; Chen, Chiu-Wen; Dong, Cheng-Di

2016-12-01

Six sediment cores collected at the Kaohsiung Harbor of Taiwan were analyzed to evaluate their vertical profiles, enrichments, accumulations, and source apportionments of heavy metals. This was performed to investigate any potential ecological risks posed by heavy metals. Results indicated that the mean heavy metal content (mg kg -1 ) in the six sediment cores was as follows: Hg (0.4-6.4), Cd (<0.05-2.4), Cr (18-820), Cu (16-760), Pb (31-140), and Zn (76-1900). The patterns of heavy metal content in the sediment cores differed substantially among the four river mouths. However, the vertical profiles of metals were relatively stable, indicating that wastewater has the constant characteristics and has been discharged into the rivers for a long period of time. Results of pollution assessment of enrichment factor, geo-accumulation index, and pollution load index revealed that river mouths experience severe enrichment, strong accumulation, and high contamination from the primary heavy metals. It was not consistent in the assessment results of mean effect range median quotient, potential ecological risk index, and total toxic unit method. Potential ecological risks caused by Hg in the sediments at Canon River and Love River mouths on aquatic organisms were extremely high. The estimates derived from the receptor modeling of multiple linear regression of the absolute principal component scores indicated that the contributions of the composite heavy metals derived from the Canon River and the Love River on the potential toxicity and risks to the water environment of Kaohsiung Harbor were highest, followed by those derived from Salt River and Jen-Gen River. Copyright © 2016 Elsevier Ltd. All rights reserved.

Abundance, distribution and bioavailability of major and trace elements in surface sediments from the Cai River estuary and Nha Trang Bay (South China Sea, Vietnam)

NASA Astrophysics Data System (ADS)

Koukina, S. E.; Lobus, N. V.; Peresypkin, V. I.; Dara, O. M.; Smurov, A. V.

2017-11-01

Major (Si, Al, Fe, Ti, Mg, Ca, Na, K, S, P), minor (Mn) and trace (Li, V, Cr, Co, Ni, Cu, Zn, As, Sr, Zr, Mo, Cd, Ag, Sn, Sb, Cs, Ba, Hg, Pb, Bi and U) elements, their chemical forms and the mineral composition, organic matter (TOC) and carbonates (TIC) in surface sediments from the Cai River estuary and Nha Trang Bay were first determined along the salinity gradient. The abundance and ratio of major and trace elements in surface sediments are discussed in relation to the mineralogy, grain size, depositional conditions, reference background and SQG values. Most trace-element contents are at natural levels and are derived from the composition of rocks and soils in the watershed. A severe enrichment of Ag is most likely derived from metal-rich detrital heavy minerals such as Ag-sulfosalts. Along the salinity gradient, several zones of metal enrichment occur in surface sediments because of the geochemical fractionation of the riverine material. The parts of actually and potentially bioavailable forms (isolated by four single chemical reagent extractions) are most elevated for Mn and Pb (up to 36% and 32% of total content, respectively). The possible anthropogenic input of Pb in the region requires further study. Overall, the most bioavailable parts of trace elements are associated with easily soluble amorphous Fe and Mn oxyhydroxides. The sediments are primarily enriched with bioavailable metal forms in the riverine part of the estuary. Natural (such as turbidities) and human-generated (such as urban and industrial activities) pressures are shown to influence the abundance and speciation of potential contaminants and therefore change their bioavailability in this estuarine system.

Polychaete response to fresh food supply at organically enriched coastal sites: Repercussion on bioturbation potential and trophic structure

NASA Astrophysics Data System (ADS)

Venturini, N.; Pires-Vanin, A. M. S.; Salhi, M.; Bessonart, M.; Muniz, P.

2011-12-01

We investigated the vertical distribution, abundance, specific and functional structure of polychaete assemblages at four organically enriched sites. The effects of fresh organic matter input from the water column driving by upwelling were evaluated. Temperature and salinity values indicate the intrusion of South Atlantic Central Water (SACW) in spring, a nutrient-rich water mass. The dominance of the conveyor belt transport (CONV) in the station influenced by SACW, in the spring survey, is associated with fresh organic matter input as indicated by higher amounts of polyunsaturated fatty acids. Conversely, the predominance of the diffusive mixing (DIFF) bioturbation category, in the sites without SACW influence is related to the preferential accumulation of more refractive food resources as indicated by higher concentrations of short chain saturated fatty acids. At the site influenced by SACW, the changes in polychaete assemblages were not all evident during proceeding upwelling conditions, but may persist at the end of the upwelling. Polychaetes in the study area seemed to be limited by the quality but not the quantity of food. The delay in polychaete response to fresh food supply may be related to the organic enrichment and the prevalence of refractory material in the sediments.

Heavy metals in the bottom sediments of the Furo of Laura estuary, Eastern Amazon, Brazil.

PubMed

Lima, M W; Santos, M L S; Faial, K C F; Freitas, E S; Lima, M O; Pereira, J A R; Cunha, I P R T

2017-05-15

The Furo of Laura is an economically important river in the Amazon estuary. Thus, in the present study, we evaluated the metal distribution (Al, Cd, Co, Cu, Cr, Fe, Ni, and Mg) in the bottom sediments of this river. The sediments were sampled at four points every 2months for a year with an Ekman-Birge sampler. After microwave acid digestion, the metal levels were determined by optical emission spectrometry with inductively coupled plasma. The particle size and organic matter content influenced the concentration of the metals. The sediments were not enriched by the analyzed metals; the estuary therefore retained the characteristics of an uncontaminated environment, thus serving as a reference environment for comparison. Copyright © 2017 Elsevier Ltd. All rights reserved.

Short-term fate of intertidal microphytobenthos carbon under enhanced nutrient availability: a 13C pulse-chase experiment

NASA Astrophysics Data System (ADS)

Riekenberg, Philip M.; Oakes, Joanne M.; Eyre, Bradley D.

2018-05-01

Shallow coastal waters in many regions are subject to nutrient enrichment. Microphytobenthos (MPB) can account for much of the carbon (C) fixation in these environments, depending on the depth of the water column, but the effect of enhanced nutrient availability on the processing and fate of MPB-derived C (MPB-C) is relatively unknown. In this study, MPB was labeled (stable isotope enrichment) in situ using 13C-sodium bicarbonate. The processing and fate of the newly fixed MPB-C was then traced using ex situ incubations over 3.5 days under different concentrations of nutrients (NH4+ and PO43-: ambient, 2 × ambient, 5 × ambient, and 10 × ambient). After 3.5 days, sediments incubated with increased nutrient concentrations (amended treatments) had increased loss of 13C from sediment organic matter (OM) as a portion of initial uptake (95 % remaining in ambient vs. 79-93 % for amended treatments) and less 13C in MPB (52 % ambient, 26-49 % amended), most likely reflecting increased turnover of MPB-derived C supporting increased production of extracellular enzymes and storage products. Loss of MPB-derived C to the water column via dissolved organic C (DOC) was minimal regardless of treatment (0.4-0.6 %). Loss due to respiration was more substantial, with effluxes of dissolved inorganic C (DIC) increasing with additional nutrient availability (4 % ambient, 6.6-19.8 % amended). These shifts resulted in a decreased turnover time for algal C (419 days ambient, 134-199 days amended). This suggests that nutrient enrichment of estuaries may ultimately lead to decreased retention of carbon within MPB-dominated sediments.

Enrichment of Geobacter species in response to stimulation of Fe(III) reduction in sandy aquifer sediments

USGS Publications Warehouse

Snoeyenbos-West, O.L.; Nevin, K.P.; Anderson, R.T.; Lovely, D.R.

2000-01-01

Engineered stimulation of Fe(III) has been proposed as a strategy to enhance the immobilization of radioactive and toxic metals in metal-contaminated subsurface environments. Therefore, laboratory and field studies were conducted to determine which microbial populations would respond to stimulation of Fe(III) reduction in the sediments of sandy aquifers. In laboratory studies, the addition of either various organic electron donors or electron shuttle compounds stimulated Fe(III) reduction and resulted in Geobacter sequences becoming important constituents of the Bacterial 16S rDNA sequences that could be detected with PCR amplification and denaturing gradient gel electrophoresis (DGGE). Quantification of Geobacteraceae sequences with a PCR most-probable-number technique indicated that the extent to which numbers of Geobacter increased was related to the degree of stimulation of Fe(III) reduction. Geothrix species were also enriched in some instances, but were orders of magnitude less numerous than Geobacter species. Shewanella species were not detected, even when organic compounds known to be electron donors for Shewanella species were used to stimulate Fe(III) reduction in the sediments. Geobacter species were also enriched in two field experiments in which Fe(III) reduction was stimulated with the addition of benzoate or aromatic hydrocarbons. The apparent growth of Geobacter species concurrent with increased Fe(III) reduction suggests that Geobacter species were responsible for much of the Fe(III) reduction in all of the stimulation approaches evaluated in three geographically distinct aquifers. Therefore, strategies for subsurface remediation that involve enhancing the activity of indigenous Fe(III)-reducing populations in aquifers should consider the physiological properties of Geobacter species in their treatment design.

Geochemistry of ferromanganese nodule-sediment pairs from Central Indian Ocean Basin

NASA Astrophysics Data System (ADS)

Pattan, J. N.; Parthiban, G.

2011-01-01

Fourteen ferromanganese nodule-sediment pairs from different sedimentary environments such as siliceous ooze (11), calcareous ooze (two) and red clay (one) from Central Indian Ocean Basin (CIOB) were analysed for major, trace and rare earth elements (REE) to understand the possible elemental relationship between them. Nodules from siliceous and calcareous ooze are diagenetic to early diagenetic whereas, nodule from red clay is of hydrogenetic origin. Si, Al and Ba are enriched in the sediments compared to associated nodules; K and Na are almost in the similar range in nodule-sediment pairs and Mn, Fe, Ti, Mg, P, Ni, Cu, Mo, Zn, Co, Pb, Sr, V, Y, Li and REEs are all enriched in nodules compared to associated sediments (siliceous and calcareous). Major portion of Si, Al and K in both nodules and sediments appear to be of terrigenous nature. The elements which are highly enriched in the nodules compared to associated sediments from both siliceous and calcareous ooze are Mo - (307, 273), Ni - (71, 125), Mn - (64, 87), Cu - (43, 80), Co - (23, 75), Pb - (15, 24), Zn - (9, 11) and V - (8, 19) respectively. These high enrichment ratios of elements could be due to effective diagenetic supply of metals from the underlying sediment to the nodule. Enrichment ratios of transition metals and REEs in the nodule to sediment are higher in CIOB compared to Pacific and Atlantic Ocean. Nodule from red clay, exhibit very small enrichment ratio of four with Mn and Ce while, Al, Fe, Ti, Ca, Na, K, Mg, P, Zn, Co, V, Y and REE are all enriched in red clay compared to associated nodule. This is probably due to presence of abundant smectite, fish teeth, micronodules and phillipsite in the red clay. The strong positive correlation ( r ⩾ 0.8) of Mn with Ni, Cu, Zn and Mo and a convex pattern of shale-normalized REE pattern with positive Ce-anomaly of siliceous ooze could be due to presence of abundant manganese micronodules. None of the major trace and REE exhibits any type of inter-elemental relationship between nodule and sediment pairs. Therefore, it may not be appropriate to correlate elemental behaviour between these pairs.

Contrasting mercury and manganese deposition in a mangrove-dominated estuary (Guaratuba Bay, Brazil)

NASA Astrophysics Data System (ADS)

Sanders, C. J.; Santos, I. R.; Silva-Filho, E. V.; Patchineelam, S. R.

2008-08-01

Sediment cores were taken at seven sites along the mangrove-bound Guaratuba Bay estuary (southern Brazil), with the purpose of assessing conditions controlling Hg deposition along a horizontal estuarine sediment gradient. The data suggest contrasting depositional patterns for Hg and Mn in this relatively pristine setting. Total Hg contents of bulk sediments ranged from 12 to 36 ng/g along the estuary, the highest values being found in muddier organic-rich sediments of the upper estuary (the corresponding mud gradient is 12 to 42 wt.%, and the organic matter gradient 4 to 10 wt.%). Thus, the deposition of fine sediments relatively enriched in mercury occurs primarily in closer proximity to the freshwater source. The data also indicate a reverse gradient in reactive Mn contents, ranging from 29 to 81 μg/g, and increasing seaward. This implies that reactive Mn is mobilized from fine-grained reducing mangrove forest sediments in the upper estuary, and deposited downstream in sandier, oxygen-rich nearshore sediments. These results suggest that mangrove-surrounded estuaries may act as barriers to mercury transport to coastal waters, but as a source of manganese. The present findings also imply that reactive Mn may be used as an indication of Hg depositional patterns in other similar coastal sedimentary settings.

River sediment metal and nutrient variations along an urban-agriculture gradient in an arid austral landscape: implications for environmental health.

PubMed

Dalu, Tatenda; Wasserman, Ryan J; Wu, Qihang; Froneman, William P; Weyl, Olaf L F

2018-01-01

The effect of metals on environmental health is well documented and monitoring these and other pollutants is considered an important part of environmental management. Developing countries are yet to fully appreciate the direct impacts of pollution on aquatic ecosystems and as such, information on pollution dynamics is scant. Here, we assessed the temporal and spatial dynamics of stream sediment metal and nutrient concentrations using contaminant indices (e.g. enrichment factors, pollution load and toxic risk indices) in an arid temperate environment over the wet and dry seasons. The mean sediment nutrient, organic matter and metal concentration were highest during the dry season, with high values being observed for the urban environment. Sediment contaminant assessment scores indicated that during the wet season, the sediment quality was acceptable, but not so during the dry season. The dry season had low to moderate levels of enrichment for metals B, Cu, Cr, Fe, Mg, K and Zn. Overall, applying the sediment pollution load index highlighted poor quality river sediment along the length of the river. Toxic risk index indicated that most sites posed no toxic risk. The results of this study highlighted that river discharge plays a major role in structuring temporal differences in sediment quality. It was also evident that infrastructure degradation was likely contributing to the observed state of the river quality. The study contributes to our understanding of pollution dynamics in arid temperate landscapes where vast temporal differences in base flow characterise the riverscape. Such information is further useful for contrasting sediment pollution dynamics in aquatic environments with other climatic regions.

Reconstructing the rise of recent coastal anoxia; molybdenum in Chesapeake Bay sediments

USGS Publications Warehouse

Adelson, J.M.; Helz, G.R.; Miller, C.V.

2001-01-01

Sporadic, direct observations over a 50 yr period inadequately characterize the history of seasonal hypoxia and anoxia in Chesapeake Bay, alarge estuary threatened by eutrophication. Here, we undertake a reconstruction of 20th century oxygen depletion in this estuary using Mo concentrations in 210Pb-dated sediments; Cu concentrations are used to control for anthropogenic influences. Cores from the central channel display mild Mo enrichments above crustal backgrounds (up to 5 ??g/g) and strong Cu enrichments (up to 35 ??g/g). Temporally, Cu enrichment (mostly anthropogenic) began earlier and stabilized in the last two thirds of the 20th century. In contrast, Mo enrichment has grown during the last two thirds of the century. Molybdenum enrichment is mostly hydrogenic, except in a section of the channel that receives additional Mo from erosion of Early Miocene shore deposits. Two geochemical mechanisms promote Mo enrichment: Manganese refluxing concentrates dissolved MoO24- at the sediment-water interface and sulfide substitution into MoO24- produces thiomolybdates, which can be fixed by particles. The Mo enrichment mechanisms operate primarily during periods when bottom waters are anoxic and thiomolybdate formation can occur near the sediment-water interface. This implies a temporal coupling between water-column anoxia and Mo fixation even though fixation occurs only within sediments. The Mo enrichment profiles suggest that Chesapeake Bay has experienced growing O2 depletion since the first half of the 20th century, but especially after 1960. Copyright ?? 2001 Elsevier Science Ltd.

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria

PubMed Central

Russell, Joseph A.; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F.

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface. PMID:27242705

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

PubMed

Russell, Joseph A; León-Zayas, Rosa; Wrighton, Kelly; Biddle, Jennifer F

2016-01-01

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic water-column west of the Mid-Atlantic Ridge at 22°N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sediment column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. The cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.

Concentration distribution and assessment of several heavy metals in sediments of west-four Pearl River Estuary

NASA Astrophysics Data System (ADS)

Wang, Shanshan; Cao, Zhimin; Lan, Dongzhao; Zheng, Zhichang; Li, Guihai

2008-09-01

Grain size parameters, trace metals (Co, Cu, Ni, Pb, Cr, Zn, Ba, Zr and Sr) and total organic matter (TOM) of 38 surficial sediments and a sediment core of west-four Pearl River Estuary region were analyzed. The spacial distribution and the transportation procession of the chemical element in surficial sediments were studied mainly. Multivariate statistics are used to analyses the interrelationship of metal elements, TOM and the grain size parameters. The results demonstrated that terrigenous sediment taken by the rivers are main sources of the trace metal elements and TOM, and the lithology of parent material is a dominating factor controlling the trace metal composition in the surficial sediment. In addition, the hydrodynamic condition and landform are the dominating factors controlling the large-scale distribution, while the anthropogenic input in the coastal area alters the regional distribution of heavy metal elements Co, Cu, Ni, Pb, Cr and Zn. The enrichment factor (EF) analysis was used for the differentiation of the metal source between anthropogenic and naturally occurring, and for the assessment of the anthropogenic influence, the deeper layer content of heavy metals were calculated as the background values and Zr was chosen as the reference element for Co, Cu, Ni, Pb, Cr and Zn. The result indicate prevalent enrichment of Co, Cu, Ni, Pb and Cr, and the contamination of Pb is most obvious, further more, the peculiar high EF value sites of Zn and Pb probably suggest point source input.

Cultivation-dependent and cultivation-independent characterization of hydrocarbon-degrading bacteria in Guaymas Basin sediments.

PubMed

Gutierrez, Tony; Biddle, Jennifer F; Teske, Andreas; Aitken, Michael D

2015-01-01

Marine hydrocarbon-degrading bacteria perform a fundamental role in the biodegradation of crude oil and its petrochemical derivatives in coastal and open ocean environments. However, there is a paucity of knowledge on the diversity and function of these organisms in deep-sea sediment. Here we used stable-isotope probing (SIP), a valuable tool to link the phylogeny and function of targeted microbial groups, to investigate polycyclic aromatic hydrocarbon (PAH)-degrading bacteria under aerobic conditions in sediments from Guaymas Basin with uniformly labeled [(13)C]-phenanthrene (PHE). The dominant sequences in clone libraries constructed from (13)C-enriched bacterial DNA (from PHE enrichments) were identified to belong to the genus Cycloclasticus. We used quantitative PCR primers targeting the 16S rRNA gene of the SIP-identified Cycloclasticus to determine their abundance in sediment incubations amended with unlabeled PHE and showed substantial increases in gene abundance during the experiments. We also isolated a strain, BG-2, representing the SIP-identified Cycloclasticus sequence (99.9% 16S rRNA gene sequence identity), and used this strain to provide direct evidence of PHE degradation and mineralization. In addition, we isolated Halomonas, Thalassospira, and Lutibacterium sp. with demonstrable PHE-degrading capacity from Guaymas Basin sediment. This study demonstrates the value of coupling SIP with cultivation methods to identify and expand on the known diversity of PAH-degrading bacteria in the deep-sea.

Cultivation-dependent and cultivation-independent characterization of hydrocarbon-degrading bacteria in Guaymas Basin sediments

PubMed Central

Gutierrez, Tony; Biddle, Jennifer F.; Teske, Andreas; Aitken, Michael D.

2015-01-01

Marine hydrocarbon-degrading bacteria perform a fundamental role in the biodegradation of crude oil and its petrochemical derivatives in coastal and open ocean environments. However, there is a paucity of knowledge on the diversity and function of these organisms in deep-sea sediment. Here we used stable-isotope probing (SIP), a valuable tool to link the phylogeny and function of targeted microbial groups, to investigate polycyclic aromatic hydrocarbon (PAH)-degrading bacteria under aerobic conditions in sediments from Guaymas Basin with uniformly labeled [13C]-phenanthrene (PHE). The dominant sequences in clone libraries constructed from 13C-enriched bacterial DNA (from PHE enrichments) were identified to belong to the genus Cycloclasticus. We used quantitative PCR primers targeting the 16S rRNA gene of the SIP-identified Cycloclasticus to determine their abundance in sediment incubations amended with unlabeled PHE and showed substantial increases in gene abundance during the experiments. We also isolated a strain, BG-2, representing the SIP-identified Cycloclasticus sequence (99.9% 16S rRNA gene sequence identity), and used this strain to provide direct evidence of PHE degradation and mineralization. In addition, we isolated Halomonas, Thalassospira, and Lutibacterium sp. with demonstrable PHE-degrading capacity from Guaymas Basin sediment. This study demonstrates the value of coupling SIP with cultivation methods to identify and expand on the known diversity of PAH-degrading bacteria in the deep-sea. PMID:26217326

The influence of particles recycling on the geochemistry of sediments in a large tropical dam lake in the Amazonian region, Brazil

NASA Astrophysics Data System (ADS)

Fonseca, Rita; Pinho, Catarina; Oliveira, Manuela

2016-12-01

As a result of over-erosion of soils, the fine particles, which contain the majority of nutrients, are easily washed away from soils, which become deficient in a host of components, accumulating in lakes. On one hand, the accumulation of nutrients-rich sediments are a problem, as they affect the quality of the overlying water and decrease the water storage capacity of the system; on the other hand, sediments may constitute an important resource, as they are often extremely rich in organic and inorganic nutrients in readily available forms. In the framework of an extensive work on the use of rock related materials to enhance the fertility of impoverish soils, this study aimed to evaluate the role on the nutrients cycle, of particles recycling processes from the watershed to the bottom of a large dam reservoir, at a wet tropical region under high weathering conditions. The study focus on the mineralogical transformations that clay particles undergo from the soils of the drainage basin to their final deposition within the reservoir and their influence in terms of the geochemical characteristics of sediments. We studied the bottom sediments that accumulate in two distinct seasonal periods in Tucuruí reservoir, located in the Amazonian Basin, Brazil, and soils from its drainage basin. The surface layers of sediments in twenty sampling points with variable depths, are representative of the different morphological sections of the reservoir. Nineteen soil samples, representing the main soil classes, were collected near the margins of the reservoir. Sediments and soils were subjected to the same array of physical, mineralogical and geochemical analyses: (1) texture, (2) characterization and semi-quantification of the clay fraction mineralogy and (3) geochemical analysis of the total concentration of major elements, organic compounds (organic C and nitrogen), soluble fractions of nutrients (P and K), exchangeable fractions (cation exchange capacity, exchangeable bases and acidity) and pH(H2O). There is a remarkable homogeneity in the sedimentary distribution along the reservoir in terms of the texture and mineralogy of the clay fraction and of the chemistry of the total, soluble and exchangeable phases. These observations contrast with the physical, morphological and chemical heterogeneity of the soils and the setting lithology. Most of the sediments has a higher contribution of fine-grained material and the mineralogy of the clay fraction is dominated by kaolinite in soils and kaolinite and illite in sediments, followed by lesser amounts of gibbsite, goethite, and metahaloisite and by small/vestigial contents of chlorite and smectite. The sediments are mainly inherited from the watershed but there exist marked differences between the accumulated sediments and their parent materials. These differences mainly come from the selective erosion of fine-grained particles and the extreme climatic conditions which enhance complex transformations of mineralogical and chemical nature. Compared with the parental soils, the reservoir sediments show the following differences: (1) enrichment in fine-grained and less dense inorganic particles, (2) aggradative mineralogical transformations, including enrichment in clay minerals with higher cationic adsorption and exchange capacity, (3) degradation of the crystalline structure of Fe- and Al-oxides (goethite, gibbsite), (4) increase in easily leached elements (Mg, Ca, P, K, Na) and decrease in chemically less mobile elements (Si, Fe) and (5) higher contents of organic carbon, nitrogen, and soluble forms of P and K, mainly concentrated in the clay fraction. These transformations are extremely important in the nutrients cycle, denoting that sediments represent an efficient sink for nutrients from the over-erosion of soils. Mineral and organic compounds can permanently or temporarily sequester these nutrients, recycling them and enhancing their availability through the slow release of components from relatively loose crystal structures. These processes can easily explain the enrichment in soluble and exchangeable forms of elements such as P, K, Ca or Mg. This study conclude that the particles recycling in a large tropical dam reservoir which receives high fluxes of allochthonous nutrients, has an important role in the good quality of sediments for agricultural use and in the profitable use of this technology to recover depleted soils in remediation projects in regions near large hydroelectric plants.

Soil aggregate stability and rainfall-induced sediment transport on field plots as affected by amendment with organic matter inputs

NASA Astrophysics Data System (ADS)

Shi, Pu; Arter, Christian; Liu, Xingyu; Keller, Martin; Schulin, Rainer

2017-04-01

Aggregate stability is an important factor in soil resistance against erosion, and, by influencing the extent of sediment transport associated with surface runoff, it is thus also one of the key factors which determine on- and off-site effects of water erosion. As it strongly depends on soil organic matter, many studies have explored how aggregate stability can be improved by organic matter inputs into the soil. However, the focus of these studies has been on the relationship between aggregate stability and soil organic matter dynamics. How the effects of organic matter inputs on aggregate stability translate into soil erodibility under rainfall impacts has received much less attention. In this study, we performed field plot experiments to examine how organic matter inputs affect aggregate breakdown and surface sediment transport under field conditions in artificial rainfall events. Three pairs of plots were prepared by adding a mixture of grass and wheat straw to one of plots in each pair but not to the other, while all plots were treated in the same way otherwise. The rainfall events were applied some weeks later so that the applied organic residues had sufficient time for decomposition and incorporation into the soil. Surface runoff rate and sediment concentration showed substantial differences between the treatments with and without organic matter inputs. The plots with organic inputs had coarser and more stable aggregates and a rougher surface than the control plots without organic inputs, resulting in a higher infiltration rate and lower transport capacity of the surface runoff. Consequently, sediments exported from the amended plots were less concentrated but more enriched in suspended particles (<20 µm) than from the un-amended plots, indicating a more size-selective sediment transport. In contrast to the amended plots, there was an increase in the coarse particle fraction (> 250 µm) in the runoff from the plots with no organic matter inputs towards the end of the rainfall events due to emerging bed-load transport. The results show that a single application of organic matter can already cause a large difference in aggregate breakdown, surface sealing, and lateral sediment-associated matter transfer under rainfall impact. Furthermore, we will present terrestrial laser scanning data showing the treatment effects on soil surface structure, as well as data on carbon, phosphorus and heavy metal export associated with the translocation of the sediments.

The Influence of Chitosan Substrate and Its Nanometric Form Toward the Green Power Generation in Sediment Microbial Fuel Cell.

PubMed

Karthikeyan, C; Sathishkumar, Y; Lee, Yang Soo; Kim, Ae Rhan; Yoo, Dong Jin; Kumar, G Gnana

2017-01-01

A simple, environmental friendly and biologically important sediment interfaced fuel cell was developed for the green energy generation. The soil sediment used for the study is enriched of rich anthropogenic free organic carbon, sufficient manganese and high level potassium contents as evidenced from the geochemical characterizations. The saccharides produced by the catalytic reaction of substrate chitosan were utilized for the growth of microorganisms and electron shuttling processes. Chitosan substrate influenced sediment microbial fuel cells exhibited the nearly two fold power increment over the substrate free fuel cells. The fuel cell efficiencies were further increased by bringing the substrate chitosan at nanometric level, which is nearly three and two fold higher than that of substrate free and chitosan influenced sediment microbial fuel cells, respectively, and the influential parameters involved in the power and longevity issues were addressed with different perspectives.

Trace metals in sediments of two estuarine lagoons from Puerto Rico.

PubMed

Acevedo-Figueroa, D; Jiménez, B D; Rodríguez-Sierra, C J

2006-05-01

Concentrations of As, Cd, Cu, Fe, Hg, Pb and Zn were evaluated in surface sediments of two estuaries from Puerto Rico, known as San José Lagoon (SJL) and Joyuda Lagoon. Significantly higher concentrations in microg/g dw of Cd (1.8 vs. 0.1), Cu (105 vs. 22), Hg (1.9 vs. 0.17), Pb (219 vs. 8), and Zn (531 vs. 52) were found in sediment samples from SJL when compared to Joyuda Lagoon. Average concentrations of Hg, Pb, and Zn in some sediment samples from SJL were above the effect range median (ERM) that predict toxic effects to aquatic organisms. Enrichments factors using Fe as a normalizer, and correlation matrices showed that metal pollution in SJL was the product of anthropogenic sources, while the metal content in Joyuda Lagoon was of natural origins. Sediment metal concentrations found in SJL were comparable to aquatic systems classified as contaminated from other regions of the world.

Preliminary study of extraction of heavy metals in sediments under pH-controlled conditions

NASA Astrophysics Data System (ADS)

Kao, M.

2012-12-01

The arsenic ingestion not only increases the risk of developing cancer of the skin, internal organs and lungs but also causes a peripheral vascular gangrene disease known as black-foot disease. It is crucial to determine the arsenic source for managing groundwater resources properly. The study area, Tsengwen Creek watershed, is in the middle of Chianan Plain, which has been identified with problems of high arsenic content in groundwater. According to the results of BCR extraction procedure conducting on core sediments, it is interesting that arsenic content extracted by deionized water is significantly higher than that extracted with the first step of BCR, which is 0.11 mol/L acetic acid. It is believed that deionized water can only extract metals adsorbing on mineral surface without strong chemical bonding and acetic acid can extract those in the forms both of adsorption and carbonate. Even though arsenic is scarcely associated with carbonates, the deionized water can obviously extract much more arsenic than acid solution. Therefore, desorption of arsenic is possible to be controlled by a strong pH-dependent reaction. For the preliminary analysis, a laboratory experiment was performed to evaluated desorption of metals with pH control in this study. The solutions with different values of pH are simply adjusted with sodium hydroxide (NaOH). Ten sediment samples were collected from aquifers in Tsengwen Creek watershed. To simulate an isolated system like groundwater in aquifer, these sediments were extracted with solutions of pH=7, 8, 9 and 10 in a container purged by nitrogen gas. The results demonstrate that arsenic does show significant enrichment in solution of pH=10 and vanadium shares the similar property with arsenic. On the contrary, the other selected metals of cadmium, copper, nickel and cobalt have no similar enrichment in high-pH extraction solution; especially, nickel and cobalt are highly enriched in deionized water. These are possibly caused by the variation of ionic potential. Rare earth elements (REE) are an excellent tracer in geochemical reaction system and were also measured in this study. The NASC-normalized results demonstrate a middle-REE-enriched pattern; i.e. terbium is the most abundant NASC-normalized REE. Some previous studies reported that a middle-REE-enriched pattern indicates a source of organic matter in soil. It is also known that humic substances prefer to be dissolved in higher pH solution. This is consistence with the results in this study.

Mangrove succession enriches the sediment microbial community in South China

PubMed Central

Chen, Quan; Zhao, Qian; Li, Jing; Jian, Shuguang; Ren, Hai

2016-01-01

Sediment microorganisms help create and maintain mangrove ecosystems. Although the changes in vegetation during mangrove forest succession have been well studied, the changes in the sediment microbial community during mangrove succession are poorly understood. To investigate the changes in the sediment microbial community during succession of mangroves at Zhanjiang, South China, we used phospholipid fatty acid (PLFA) analysis and the following chronosequence from primary to climax community: unvegetated shoal; Avicennia marina community; Aegiceras corniculatum community; and Bruguiera gymnorrhiza + Rhizophora stylosa community. The PLFA concentrations of all sediment microbial groups (total microorganisms, fungi, gram-positive bacteria, gram-negative bacteria, and actinomycetes) increased significantly with each stage of mangrove succession. Microbial PLFA concentrations in the sediment were significantly lower in the wet season than in the dry season. Regression and ordination analyses indicated that the changes in the microbial community with mangrove succession were mainly associated with properties of the aboveground vegetation (mainly plant height) and the sediment (mainly sediment organic matter and total nitrogen). The changes in the sediment microbial community can probably be explained by increases in nutrients and microhabitat heterogeneity during mangrove succession. PMID:27265262

Mangrove succession enriches the sediment microbial community in South China.

PubMed

Chen, Quan; Zhao, Qian; Li, Jing; Jian, Shuguang; Ren, Hai

2016-06-06

Sediment microorganisms help create and maintain mangrove ecosystems. Although the changes in vegetation during mangrove forest succession have been well studied, the changes in the sediment microbial community during mangrove succession are poorly understood. To investigate the changes in the sediment microbial community during succession of mangroves at Zhanjiang, South China, we used phospholipid fatty acid (PLFA) analysis and the following chronosequence from primary to climax community: unvegetated shoal; Avicennia marina community; Aegiceras corniculatum community; and Bruguiera gymnorrhiza + Rhizophora stylosa community. The PLFA concentrations of all sediment microbial groups (total microorganisms, fungi, gram-positive bacteria, gram-negative bacteria, and actinomycetes) increased significantly with each stage of mangrove succession. Microbial PLFA concentrations in the sediment were significantly lower in the wet season than in the dry season. Regression and ordination analyses indicated that the changes in the microbial community with mangrove succession were mainly associated with properties of the aboveground vegetation (mainly plant height) and the sediment (mainly sediment organic matter and total nitrogen). The changes in the sediment microbial community can probably be explained by increases in nutrients and microhabitat heterogeneity during mangrove succession.

Accumulation of trace metals in sediments in a Mediterranean Lagoon: Usefulness of metal sediment fractionation and elutriate toxicity assessment.

PubMed

Zaaboub, Noureddine; Martins, Maria Virgínia Alves; Dhib, Amel; Béjaoui, Béchir; Galgani, François; El Bour, Monia; Aleya, Lotfi

2015-12-01

The authors investigated sediment quality in Bizerte Lagoon (Tunisia) focusing on geochemical characteristics, metal sediment fractionation and elutriate toxicity assessment. Nickel, Cu, Zn, Pb, Cr and Cd partitioning in sediments was studied; accumulation and bioavailability were elucidated using enrichment factors, sequential extractions, redox potential, acid volatile sulfide and biotest procedures in toxicity evaluation. Results revealed an accumulation for Pb and Zn, reaching 99 and 460 mg kg(-1) respectively. In addition, the acid volatile sulfide values were high in both eastern and western lagoon areas, thus affecting metal availability. Mean enrichment factor values for Pb and Zn were 4.8 and 4.9, respectively, with these elements as the main contributors to the lagoon's moderate enrichment level. Toxicity levels were influenced by accumulation of Zn in different surface sediment areas. Core sediments were investigated in areas with the highest metal concentrations; metal fractionation and biotest confirmed that Zn contributes to sediment toxicity. Copyright © 2015 Elsevier Ltd. All rights reserved.

Up-flow anaerobic sediment trapped (UAST) reactor as a new configuration for the enrichment of anammox bacteria from marine sediments.

PubMed

Rios-Del Toro, E Emilia; López-Lozano, Nguyen E; Cervantes, Francisco J

2017-08-01

A novel reactor configuration for the enrichment of anammox bacteria from marine sediments was developed. Marine sediments were successfully kept inside the bioreactors during the enrichment process by strategically installing traps at different depths to prevent the wash-out of sediments. Three up-flow anaerobic sediment trapped (UAST) reactors were set up (α, β and ω supplied with 50, 150 and 300mgCa 2+ /L, respectively). Nitrogen removal rates (NRR) of up to 3.5gN/L-d and removal efficiencies of >95% were reached. Calcium enhanced biomass production as evidenced by increased volatile suspended solids and extracellular polymeric substances. After the long-term operation, dominant families detected were Rhodobacteracea, Flavobacteracea, and Alteromonadacea, while the main anammox genera detected in the three reactors were Candidatus Kuenenia and Candidatus Anammoximicrobium. The UAST reactor is proposed as suitable technology for the enrichment of anammox bacteria applicable for the treatment of saline industrial wastewaters with high nitrogen content. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil organic carbon redistribution by water erosion: An experimental rainfall simulation approach

NASA Astrophysics Data System (ADS)

Wang, Xiang; Cammeraat, Erik; Romeijn, Paul; Kalbitz, Karsten

2014-05-01

Water erosion influences the redistribution of soil organic carbon (SOC) in landscapes and there is a strong need to better understand these processes with respect to the carbon (C) budget, from local to global scales. We present a study in which the total carbon budget of a loess soil under erosion was determined in an experimental set-up. We measured fluxes of SOC, dissolved organic C (DOC) and CO2 in a climate controlled pseudo-replicated rainfall-simulation laboratory experiment. This approach has been rarely followed to integrate all components of the C budget in one experiment. We characterized different C fractions in soils and redistributed sediments using density fractionation and determined C enrichment ratios (CER) in the transported sediments. Erosion, transport and subsequent deposition resulted in a significantly higher CER of the sediments exported ranging between 1.3 and 4.0. In the exported sediments, C contents (mg per g soil) of particulate organic C (POC, C not bound to soil minerals) and mineral-associated organic C (MOC) were both significantly higher than those of non-eroded soils indicating that water erosion resulted in losses of C-enriched material both in forms of POC and MOC. The averaged SOC fluxes as particles (4.7 g C m-2 yr-1) were 18 times larger than DOC fluxes. Cumulative emission of soil CO2 slightly decreased at the erosion zone while increased by 27% at the deposition zone in comparison to non-eroded soils. Overall, CO2 emission was the predominant form of C loss contributing to about 90.5% of total erosion-induced C losses in our 4-month experiment. However, only 1.5 % of redistributed C was mineralized highlighting that the C sink induced by deposition is much larger than previously assumed. Our study also underlines the importance of C losses by particles and as DOC for understanding effects of water erosion on the C balance at the interface of terrestrial and aquatic systems. Furthermore our study revealed that the sediment and C fluxes showed good correspondence with values obtained in real landscapes as reported in literature. This confirms that a lab-approach, despite its shortcomings with respect to scale, is valuable and gives additional information on processes affecting the soil carbon budget. This is urgently needed and improves our knowledge on the fate of SOC in erosion-depositional systems.

Microbial ecology of arsenic-mobilizing Cambodian sediments: lithological controls uncovered by stable-isotope probing.

PubMed

Héry, Marina; Rizoulis, Athanasios; Sanguin, Hervé; Cooke, David A; Pancost, Richard D; Polya, David A; Lloyd, Jonathan R

2015-06-01

Microbially mediated arsenic release from Holocene and Pleistocene Cambodian aquifer sediments was investigated using microcosm experiments and substrate amendments. In the Holocene sediment, the metabolically active bacteria, including arsenate-respiring bacteria, were determined by DNA stable-isotope probing. After incubation with (13) C-acetate and (13) C-lactate, active bacterial community in the Holocene sediment was dominated by different Geobacter spp.-related 16S rRNA sequences. Substrate addition also resulted in the enrichment of sequences related to the arsenate-respiring Sulfurospirillum spp. (13) C-acetate selected for ArrA related to Geobacter spp. whereas (13) C-lactate selected for ArrA which were not closely related to any cultivated organism. Incubation of the Pleistocene sediment with lactate favoured a 16S rRNA-phylotype related to the sulphate-reducing Desulfovibrio oxamicus DSM1925, whereas the ArrA sequences clustered with environmental sequences distinct from those identified in the Holocene sediment. Whereas limited As(III) release was observed in Pleistocene sediment after lactate addition, no arsenic mobilization occurred from Holocene sediments, probably because of the initial reduced state of As, as determined by X-ray Absorption Near Edge Structure. Our findings demonstrate that in the presence of reactive organic carbon, As(III) mobilization can occur in Pleistocene sediments, having implications for future strategies that aim to reduce arsenic contamination in drinking waters by using aquifers containing Pleistocene sediments. © 2014 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

The hyper-enrichment of V and Zn in black shales of the Late Devonian-Early Mississippian Bakken Formation (USA)

USGS Publications Warehouse

Scott, Clinton T.; Slack, John F.; Kelley, Karen Duttweiler

2017-01-01

Black shales of the Late Devonian to Early Mississippian Bakken Formation are characterized by high concentrations of organic carbon and the hyper-enrichment (> 500 to 1000s of mg/kg) of V and Zn. Deposition of black shales resulted from shallow seafloor depths that promoted rapid development of euxinic conditions. Vanadium hyper-enrichments, which are unknown in modern environments, are likely the result of very high levels of dissolved H2S (~ 10 mM) in bottom waters or sediments. Because modern hyper-enrichments of Zn are documented only in Framvaren Fjord (Norway), it is likely that the biogeochemical trigger responsible for Zn hyper-enrichment in Framvaren Fjord was also present in the Bakken basin. With Framvaren Fjord as an analogue, we propose a causal link between the activity of phototrophic sulfide oxidizing bacteria, related to the development of photic-zone euxinia, and the hyper-enrichment of Zn in black shales of the Bakken Formation.

Evidence for iron-sulfate coupling in salt marsh sediments

NASA Astrophysics Data System (ADS)

Mills, Jennifer; Antler, Gilad; Turchyn, Alexandra

2014-05-01

Organic carbon burial in shallow marine sediments represents an important net sink in the global carbon cycle. Microbially mediated oxidation of organic matter in oxic, suboxic, and anoxic sediments however, prevents the ultimate burial of organic carbon and its removal from the surface of the planet. Although the subsurface transformations of organic carbon have been studied extensively, an enigmatic question remains: when organic matter is deposited, what determines whether it will be buried, reoxidized, or undergo methanogenesis? One hypothesis is that the sulfur cycle, due to the abundance of sulfate in many surface environments, dominates the subsurface oxidation or other fate of organic carbon. However, it has also been suggested that iron may in turn play a key role in determining the behavior of the sulfur cycle. To better understand the controls on these processes, we are using stable isotope and geochemical techniques to explore the microbially mediated oxidation of organic carbon in salt marsh sediments in North Norfolk, UK. In these sediments there is a high supply of organic carbon, iron, and sulfate (from diurnal tidal cycles). Thus these environments may provide insight into the nature of interactions between the carbon, iron, and sulfur cycles. A series of sampling missions was undertaken in the autumn and winter of 2013-2014. In subsurface fluid samples we observe very high ferrous iron concentrations (>1mM), indicative of extended regions of iron reduction (to over 30cm depth). Within these zones of iron reduction we would predict no sulfate reduction, and as expected δ34Ssulfate remains unchanged with depth. However, δ18Osulfate exhibits significant enrichments of up to 5 permil. This decoupling in the sulfur and oxygen isotopes of sulfate is suggestive of a sulfate recycling process in which sulfate is reduced to an intermediate sulfur species and subsequently reoxidized to sulfate. Taken together, these data suggest that microbial assemblages in these salt marsh sediments facilitate a cryptic cycling of sulfur, potentially mediated by iron species in the zone of iron reduction.

Capture and characterization of particulate phosphorus from farm drainage waters in the Everglades Agricultural Area

NASA Astrophysics Data System (ADS)

Bhadha, J. H.; Lang, T.; Daroub, S.

2012-12-01

The buildup of highly labile, organic, phosphorus (P)-enriched sediments in farms canals within the Everglades Agricultural Area (EAA) has been associated with the production of floating aquatic vegetation. During drainage events, these sediments are susceptible to transport and contribute to the overall P load. In order to evaluate the total P load exiting the farm canals, a settling tank experiment was conducted to capture the sediments during drainage events from eight farms. Drainage water was channelized through two 200L polypropylene collection tanks which allowed sediments to settle at the bottom based on its particle size. Water was carefully siphoned out of the tanks and the sediments collected for analyses. A five step P-fractionation process was used to distinguish organic (o) and inorganic (i) forms of P: KCl extractable P, NaOH extractable P, HCl extractable P, and residual P. The KCl-Pi fraction represents the labile Pi that is water soluble and exchangeable (loosely adsorbed); NaOH extractable P represents Fe- and Al- bound inorganic P (NaOH-Pi) and organic P associated with humic and fulvic acids (NaOH-Po). The HCl-Pi fraction includes Ca- and Mg- bound P, while Residue-P represents recalcitrant organic P compounds and P bound to minerals. The sediments were also used to conduct a P-flux study under both aerobic and anaerobic conditions. Our goal is to provide growers with vital information and insight into P loading that will help them in their efforts to reduce off-farm P loads in the EAA.

Effect of organic enrichment and thermal regime on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in hypolimnetic sediments of two lowland lakes.

PubMed

Nizzoli, Daniele; Carraro, Elisa; Nigro, Valentina; Viaroli, Pierluigi

2010-05-01

We analyzed benthic fluxes of inorganic nitrogen, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) rates in hypolimnetic sediments of lowland lakes. Two neighbouring mesotrophic (Ca' Stanga; CS) and hypertrophic (Lago Verde; LV) lakes, which originated from sand and gravel mining, were considered. Lakes are affected by high nitrate loads (0.2-0.7 mM) and different organic loads. Oxygen consumption, dissolved inorganic carbon, methane and nitrogen fluxes, denitrification and DNRA were measured under summer thermal stratification and late winter overturn. Hypolimnetic sediments of CS were a net sink of dissolved inorganic nitrogen (-3.5 to -4.7 mmol m(-2)d(-1)) in both seasons due to high nitrate consumption. On the contrary, LV sediments turned from being a net sink during winter overturn (-3.5 mmol m(-2)d(-1)) to a net source of dissolved inorganic nitrogen under summer conditions (8.1 mmol m(-2)d(-1)), when significant ammonium regeneration was measured at the water-sediment interface. Benthic denitrification (0.7-4.1 mmol m(-2)d(-1)) accounted for up to 84-97% of total NO(3)(-) reduction and from 2 to 30% of carbon mineralization. It was mainly fuelled by water column nitrate. In CS, denitrification rates were similar in winter and in summer, while in LV summer rates were 4 times lower. DNRA rates were generally low in both lakes (0.07-0.12 mmol m(-2)d(-1)). An appreciable contribution of DNRA was only detected in the more reducing sediments of LV in summer (15% of total NO(3)(-) reduction), while during the same period only 3% of reduced NO(3)(-) was recycled into ammonium in CS. Under summer stratification benthic denitrification was mainly nitrate-limited due to nitrate depletion in hypolimnetic waters and parallel oxygen depletion, hampering nitrification. Organic enrichment and reducing conditions in the hypolimnetic sediment shifted nitrate reduction towards more pronounced DNRA, which resulted in the inorganic nitrogen recycling and retention within the bottom waters. The prevalence of DNRA could favour the accumulation of mineral nitrogen with detrimental effects on ecosystem processes and water quality. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Uranium Stable Isotopes: A Proxy For Productivity Or Ocean Oxygenation?

NASA Astrophysics Data System (ADS)

Severmann, S.

2015-12-01

Uranium elemental abundances in sediments have traditionally been used to reconstruct primary productivity and carbon flux in the ocean. 238U/235U isotope compositions, in contrast, are currently understood to reflect the extent of bottom water anoxia in the ocean. A review of our current understanding of authigenic U enrichment mechanism into reducing sediments suggests that a revision of this interpretation is warranted. Specifically, the current interpretation of U isotope effects in suboxic vs. anoxic deposits has not taken into account the well-documented linear relationship with organic C burial rates. Although organic C rain rates (i.e., surface productivity) and bottom water oxygenation are clearly related, distinction between these two environmental controls is conceptually important as it relates to the mechanism of enhanced C burial and ultimately the strength of the biological pump. Here we will review new and existing data to test the hypothesis that the isotope composition of authigenic U in reducing sediments are best described by their relationship with parameters related to organic carbon delivery and burial, rather than bottom water oxygen concentration.

Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river

NASA Astrophysics Data System (ADS)

Atashgahi, Siavash; Aydin, Rozelin; Dimitrov, Mauricio R.; Sipkema, Detmer; Hamonts, Kelly; Lahti, Leo; Maphosa, Farai; Kruse, Thomas; Saccenti, Edoardo; Springael, Dirk; Dejonghe, Winnie; Smidt, Hauke

2015-11-01

The impact of the installation of a technologically advanced wastewater treatment plant (WWTP) on the benthic microbial community of a vinyl chloride (VC) impacted eutrophic river was examined two years before, and three and four years after installation of the WWTP. Reduced dissolved organic carbon and increased dissolved oxygen concentrations in surface water and reduced total organic carbon and total nitrogen content in the sediment were recorded in the post-WWTP samples. Pyrosequencing of bacterial 16S rRNA gene fragments in sediment cores showed reduced relative abundance of heterotrophs and fermenters such as Chloroflexi and Firmicutes in more oxic and nutrient poor post-WWTP sediments. Similarly, quantitative PCR analysis showed 1-3 orders of magnitude reduction in phylogenetic and functional genes of sulphate reducers, denitrifiers, ammonium oxidizers, methanogens and VC-respiring Dehalococcoides mccartyi. In contrast, members of Proteobacteria adapted to nutrient-poor conditions were enriched in post-WWTP samples. This transition in the trophic state of the hyporheic sediments reduced but did not abolish the VC respiration potential in the post-WWTP sediments as an important hyporheic sediment function. Our results highlight effective nutrient load reduction and parallel microbial ecological state restoration of a human-stressed urban river as a result of installation of a WWTP.

Anthropogenic influence on trace element geochemistry of healing mud (peloid) from Makirina Cove (Croatia)

NASA Astrophysics Data System (ADS)

Miko, S.; Koch, G.; Mesić, S.; Šparica-Miko, M.; Šparica, M.; Čepelak, R.; Bačani, A.; Vreča, P.; Dolenec, T.; Bergant, S.

2008-08-01

Due to their balneotherapeutic features, the organic-rich sediments in Makirina Cove are an important source of healing mud. An environmental geochemistry approach using normalization techniques was applied to evaluate the anthropogenic contribution of trace metals to sediments used as healing mud. Sediment geochemistry was found to be associated with land-use change and storm events, as well as with proximity of a road with heavy traffic in the summer months. Local valley topography preferentially channels lithogenic and pollutant transport to the cove. Concentrations and distribution of trace metals indicate lithogenic (Ni, Cr, Co) and anthropogenic (Pb, Cu, Zn and Se) contributions to the sediments. The calculation of enrichment factors indicates a moderate (EFs between 2-3.5) input of anthropogenic Cu and Pb in surficial sediments to a depth of 10 cm. Patients using the Makirina Cove sediments as healing mud could be to some extent exposed to enhanced uptake of metals from anthropogenic sources via dermal contact.

Assessment of heavy metal enrichment and its human impact in lacustrine sediments from four lakes in the mid-low reaches of the Yangtze River, China.

PubMed

Bing, Haijian; Wu, Yanhong; Liu, Enfeng; Yang, Xiangdong

2013-07-01

Sediments from four lakes in the mid-low reaches of the Yangtze River, Taibai Lake, Longgan Lake, Chaohu Lake and Xijiu Lake, were chosen to evaluate their enrichment state and history. The state of heavy metal enrichment was at a low level in the sediment of Taibai Lake and Longgan Lake. The enrichment state of Co, Cr and Ni was also low in the sediment of Chaohu Lake and Xijiu Lake, while Cu, Pb and Zn enrichment reached a higher level. Mass accumulation fluxes were calculated to quantitatively evaluate the anthropogenic contribution to heavy metals in the sediment. The anthropogenic accumulation fluxes were lower in the sediment of Taibai Lake and Longgan Lake compared with the other two lakes, where heavy metals, especially Cu, Pb and Zn, were mainly from anthropogenic sources. Heavy metal accumulation did not vary greatly in the sediment of Taibai Lake and Longgan Lake, while that in Chaohu Lake and Xijiu Lake increased since the 1950s and substantially increased since the 1980s, although a decrease occurred since 2000 AD in Xijiu Lake. Heavy metal enrichment was strongly related to human activities in the catchment. The development of urbanization and industrialization was much more rapid in the catchments of Chaohu Lake and Xijiu Lake than of the other two lakes, and thus large amounts of anthropogenically sourced heavy metals were discharged into the lakes, which resulted in a higher contamination risk. However, human activities in the Longgan Lake and Taibai Lake catchments mainly involved agriculture, which contributed a relatively small portion of heavy metals to the lakes.

Transcriptional responses in juvenile Atlantic cod (Gadus morhua) after exposure to mercury-contaminated sediments obtained near the wreck of the German WW2 submarine U-864, and from Bergen Harbor, Western Norway.

PubMed

Olsvik, Pål A; Brattås, Marianne; Lie, Kai K; Goksøyr, Anders

2011-04-01

The main aim of the present work was to investigate the effects of mercury (Hg)-enriched sediments on fish. Sediments near the sunken German WW2 submarine U-864, which according to historical documents included 67 tons of metallic Hg in its cargo, are enriched of Hg leaking from the wreckage. Juvenile Atlantic cod (Gadus morhua) were exposed to two field-collected polluted sediments (U-864: inorganic Hg and Bergen Harbor (Vågen): inorganic Hg, PCB and PAH) or two comparable reference sediments for 5 weeks in the laboratory, and transcriptional responses evaluated in gills and liver. Gills of fish exposed to the Hg-enriched sunken WW2 submarine U-864 sediment contained four fold higher Hg levels compared to the control fish. An increase in Hg content in liver in the U-864 fish was also observed. The transcriptional results showed that calreticulin, HSP70 and heme oxygenase mRNA were significantly up-regulated in gills in fish exposed to the Hg-enriched sediments, whereas calreticulin, heme oxygenase, transferrin and WAP65 were significantly up-regulated and glutathione peroxidase 4B and zona pellucida 3 were significantly down-regulated in liver tissue. In gills and liver of cod exposed to the mixed-contaminated Vågen sediment, CYP1A showed the highest induction. In conclusion, the experiment shows that sediment-bound Hg is available to the fish and affects the transcription of oxidative stress responsive enzymes, suggesting that the Hg-enriched sediments may negatively affect the local wildlife. Furthermore, the mixed contaminated sediments of Vågen affected similar responses in addition to Ah-receptor mediated responses reflecting exposure to PAHs and PCBs. Copyright © 2010 Elsevier Ltd. All rights reserved.

Bromine soil/sediment enrichment in tidal salt marshes as a potential indicator of climate changes driven by solar activity: New insights from W coast Portuguese estuaries.

PubMed

Moreno, J; Fatela, F; Leorri, E; Moreno, F; Freitas, M C; Valente, T; Araújo, M F; Gómez-Navarro, J J; Guise, L; Blake, W H

2017-02-15

This paper aims at providing insight about bromine (Br) cycle in four Portuguese estuaries: Minho, Lima (in the NW coast) and Sado, Mira (in the SW coast). The focus is on their tidal marsh environments, quite distinct with regard to key biophysicochemical attributes. Regardless of the primary bromide (Br - ) common natural source, i.e., seawater, the NW marshes present relatively higher surface soil/sediment Br concentrations than the ones from SW coast. This happens in close connection with organic matter (OM) content, and is controlled by their main climatic contexts. Yet, the anthropogenic impact on Br concentrations cannot be discarded. Regarding [Br] spatial patterns across the marshes, the results show a general increase from tidal flat toward high marsh. Maxima [Br] occur in the upper driftline zone, at transition from highest low marsh to high marsh, recognized as a privileged setting for OM accumulation. Based on the discovery of OM ubiquitous bromination in marine and transitional environments, it is assumed that this Br occurs mainly as organobromine. Analysis of two dated sediment cores indicates that, despite having the same age (AD ~1300), the Caminha salt marsh (Minho estuary) evidences higher Br enrichment than the Casa Branca salt marsh (Mira estuary). This is related to a greater Br storage ability, which is linked to OM build-up and rate dynamics under different climate scenarios. Both cores evidence a fairly similar temporal Br enrichment pattern, and may be interpreted in light of the sun-climate coupling. Thereby, most of the well-known Grand Solar Minima during the Little Ice Age appear to have left an imprint on these marshes, supported by higher [Br] in soils/sediments. Besides climate changes driven by solar activity and impacting marsh Br biogeodynamics, those Br enrichment peaks might also reflect inputs of enhanced volcanic activity covarying with Grand Solar Minima. Copyright © 2016 Elsevier B.V. All rights reserved.

The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions

PubMed Central

Bukin, Sergei V.; Pavlova, Olga N.; Manakov, Andrei Y.; Kostyreva, Elena A.; Chernitsyna, Svetlana M.; Mamaeva, Elena V.; Pogodaeva, Tatyana V.; Zemskaya, Tamara I.

2016-01-01

The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids. PMID:27242716

The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions.

PubMed

Bukin, Sergei V; Pavlova, Olga N; Manakov, Andrei Y; Kostyreva, Elena A; Chernitsyna, Svetlana M; Mamaeva, Elena V; Pogodaeva, Tatyana V; Zemskaya, Tamara I

2016-01-01

The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids.

Organic matter degradation drives benthic cyanobacterial mat abundance on Caribbean coral reefs.

PubMed

Brocke, Hannah J; Polerecky, Lubos; de Beer, Dirk; Weber, Miriam; Claudet, Joachim; Nugues, Maggy M

2015-01-01

Benthic cyanobacterial mats (BCMs) are impacting coral reefs worldwide. However, the factors and mechanisms driving their proliferation are unclear. We conducted a multi-year survey around the Caribbean island of Curaçao, which revealed highest BCM abundance on sheltered reefs close to urbanised areas. Reefs with high BCM abundance were also characterised by high benthic cover of macroalgae and low cover of corals. Nutrient concentrations in the water-column were consistently low, but markedly increased just above substrata (both sandy and hard) covered with BCMs. This was true for sites with both high and low BCM coverage, suggesting that BCM growth is stimulated by a localised, substrate-linked release of nutrients from the microbial degradation of organic matter. This hypothesis was supported by a higher organic content in sediments on reefs with high BCM coverage, and by an in situ experiment which showed that BCMs grew within days on sediments enriched with organic matter (Spirulina). We propose that nutrient runoff from urbanised areas stimulates phototrophic blooms and enhances organic matter concentrations on the reef. This organic matter is transported by currents and settles on the seabed at sites with low hydrodynamics. Subsequently, nutrients released from the organic matter degradation fuel the growth of BCMs. Improved management of nutrients generated on land should lower organic loading of sediments and other benthos (e.g. turf and macroalgae) to reduce BCM proliferation on coral reefs.

Sediment texture and metal contamination in the Venice Lagoon (Italy): A snapshot before the installation of the MOSE system

NASA Astrophysics Data System (ADS)

Zonta, Roberto; Botter, Margherita; Cassin, Daniele; Bellucci, Luca Giorgio; Pini, Roberto; Dominik, Janusz

2018-05-01

Sediments of the Venice Lagoon down to 50 cm depth were investigated to assess sediment texture and metal contamination status, before the construction and activation of the MOSE system, which is intended to prevent the periodical flood events affecting the lagoon and the city of Venice. 380 cores were collected in shallow-water areas of the lagoon, and analysed along their vertical profile to determine grain-size distribution and concentrations of some major and trace elements (Al, As, Cr, Cu, Fe, Hg, Mn, Ni, Pb and Zn), total carbon and organic carbon. Radionuclide analyses (137Cs, 210Pb) were performed on 15 cores in an attempt to establish sediment chronology and determine radionuclide inventories in erosional and depositional areas. On the whole-lagoon scale, strong depletion of particles <31 μm in diameter (from medium silt to clay fractions) was observed in sediments down to 10 cm depth in comparison to deeper layers. This depletion characterised both erosional and depositional areas, and may be caused by increased water dynamics and resuspension of sediment due to anthropogenic activities. The apparent sediment accumulation rate determined with 210Pbxs in depositional areas was estimated at 0.2-0.4 cm y-1. In the majority of cores, 210Pbxs inventories were lower than expected from atmospheric fallout, suggesting its export along with fine particles. The different sediment characteristics in terms of grain-size distribution and organic carbon content observed in the upper layer with respect to the deeper ones reflect the modification of the sedimentary balance in recent years. The loss of fine particles, even from sediments in depositional areas of the northern part of the lagoon, may herald changes in local sediment texture leading to a further depletion of morphodiversity, which in turn may lead to the reduction or loss of important lagoon habitats. On the whole-lagoon scale, the prevalently lithogenic elements (Al, As, Cr, Fe, Mn, Ni) decreased towards the top of the cores, reflecting the depletion of fine particles in the upper sediment layer due to winnowing in non-confined lagoon areas. In contrast, partly anthropogenic elements (Cu, Hg, Pb, Zn) increased up to the subsurface sediment layers (5-10 and/or 10-20 cm) as an effect of increasing pollutant inputs until a certain time in the past. Enrichment Factors (EF) were calculated from 9 cores, comparing concentrations in the "pre-industrial" (>100 years ago) and recent (surface layer, 0-5 cm) sediments. The mostly lithogenic elements were not enriched (EF ˜ 1), whereas the partly anthropogenic elements showed slight (Cu and Pb, EF ˜ 1.2) to significant (Hg and Zn, EF ˜ 2) enrichment. The shallow waters on the landward side (particularly close to freshwater inputs), the area nearby the industrial district of Porto Marghera and a small zone adjacent to the city of Chioggia were identified as the main pollutant accumulation sites. Mercury was the only element potentially harmful for aquatic life. Its concentration in the biologically active surface sediment layer (0-5 cm) exceeded the NOAA Effects Range-Median (ERM) value in 27% of samples, corresponding to 20% of the shallow-water surface area. The collected data set represents a valuable reference for monitoring the impact of the construction and operation of the MOSE system on the sediment features of the Venice Lagoon.

Origin of stratiform sediment-hosted manganese carbonate ore deposits: Examples from Molango, Mexico, and TaoJiang, China

USGS Publications Warehouse

Okita, P.M.; Shanks, Wayne C.

1992-01-01

Carbonate and sulfide minerals from the Molango, Mexico, and TaoJiang, China, Mn deposits display similar and distinctive ??34S and ??13C patterns in intervals of manganese carbonate mineralization. ??13C-values for Mn-bearing carbonate range from -17.8 to +0.5??? (PDB), with the most negative values occurring in high-grade ore zones that are composed predominantly of rhodochrosite. In contrast, calcite from below, within and above Mn-carbonate zones at Molango has ??13C???0??? (PDB). Markedly negative ??13C data indicate that a large proportion of the carbon in Mn-carbonates was derived from organic matter oxidation. Diagenetic reactions using MnO2 and SO2-4 to oxidize sedimentary organic matter were the principle causes of such 12C enrichment. Pyrite content and sulfide ?? 34S-values also show distinctive variations. In unmineralized rocks, very negative ??34S-values (avg. < -21??? CDT) and abundant pyrite content suggest that pyrite formed from diagenetic, bacteriogenic sulfate reduction. In contrast, Mn-bearing horizons typically contain only trace amounts of pyrite (e.g., <0.5 wt% S with ??34S-values 34S-enriched, in some cases to nearly the value for contemporaneous seawater. 34S-enriched pyrite from the Mn-carbonate intervals indicates sulfide precipitation in an environment that underwent extensive SO2-4 reduction, and was largely a closed system with regard to exchange of sulfate and dissolved sulfide with normal seawater. The occasional occurrence of 34S-depleted pyrite within Mn-carbonate zones dominated by 34S-enriched pyrite is evidence that closed-system conditions were intermittent and limited to local pore waters and did not involve entire sedimentary basins. Mn-carbonate precipitation may have occluded porosity in the surficial sediments, thus establishing an effective barrier to SO2-4 exchange with overlying seawater. Similar isotopic and mineralogic characteristics from both the Molango and TaoJiang deposits, widely separated in geologic time and space, suggest they were formed similarly by MnO2 precipitation at the margins of dysaerobic to anoxic marine basins. Mn-carbonate formed predominantly by early-diagenetic reduction of Mn-oxides via oxidation of organic matter in near-surface sediments. In addition to MnCO3 precipitation, organic matter oxidation reactions resulted in oxidation of FeS to Fe-oxides such as magnetite, maghemite and hematite. The latter process explains anomalously low pyrite content and abundant Fe-oxide minerals in ore zones dominated by rhodochrosite. ?? 1992.

Culturable prokaryotic diversity of deep, gas hydrate sediments: first use of a continuous high-pressure, anaerobic, enrichment and isolation system for subseafloor sediments (DeepIsoBUG)

PubMed Central

Parkes, R John; Sellek, Gerard; Webster, Gordon; Martin, Derek; Anders, Erik; Weightman, Andrew J; Sass, Henrik

2009-01-01

Deep subseafloor sediments may contain depressurization-sensitive, anaerobic, piezophilic prokaryotes. To test this we developed the DeepIsoBUG system, which when coupled with the HYACINTH pressure-retaining drilling and core storage system and the PRESS core cutting and processing system, enables deep sediments to be handled without depressurization (up to 25 MPa) and anaerobic prokaryotic enrichments and isolation to be conducted up to 100 MPa. Here, we describe the system and its first use with subsurface gas hydrate sediments from the Indian Continental Shelf, Cascadia Margin and Gulf of Mexico. Generally, highest cell concentrations in enrichments occurred close to in situ pressures (14 MPa) in a variety of media, although growth continued up to at least 80 MPa. Predominant sequences in enrichments were Carnobacterium, Clostridium, Marinilactibacillus and Pseudomonas, plus Acetobacterium and Bacteroidetes in Indian samples, largely independent of media and pressures. Related 16S rRNA gene sequences for all of these Bacteria have been detected in deep, subsurface environments, although isolated strains were piezotolerant, being able to grow at atmospheric pressure. Only the Clostridium and Acetobacterium were obligate anaerobes. No Archaea were enriched. It may be that these sediment samples were not deep enough (total depth 1126–1527 m) to obtain obligate piezophiles. PMID:19694787

Hydrophobic organic contaminants in surficial sediments of Baltimore Harbor: Inventories and sources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ashley, J.T.F.; Baker, J.E.

1999-05-01

The heavily urbanized and industrialized Baltimore Harbor/Patapsco River/Back River system is one of the most highly contaminated regions of the Chesapeake Bay. In June 1996, surficial sediments were collected at 80 sites throughout the subestuarine system, including historically undersampled creek sand embayments. The samples were analyzed for a suite of hydrophobic organic contaminants (HOCs) consisting of 32 polycyclic aromatic hydrocarbons (PAHs) and 113 polychlorinated biphenyl (PCB) congeners. Total PAH and total PCB concentrations ranged from 90 to 46,200 and 8 to 2,150 ng/g dry weight, respectively. There was enormous spatial variability in the concentrations of HOCs, which was not wellmore » correlated to grain size or organic carbon content, suggesting nonequilibrium partitioning and/or proximity to sources as important factors explaining the observed spatial variability. High concentrations of both classes of HOCs were localized around major urban stormwater runoff discharges. Elevated PAH concentrations were also centered around the Sparrow`s Point Industrial Complex, most likely a result of the pyrolysis of coal during the production of steel. All but 1 of the 80 sites exceeded the effects range-low (ERL) for total PCBs and, of those sites, 40% exceeded the effects range-medium (ERM), suggesting toxicity to marine benthic organisms would frequently occur. Using principal component analysis, differences in PAH signatures were discerned. Higher molecular weight PAHs were enriched in signatures from sediments close to suspected sources (i.e., urban stormwater runoff and steel production complexes) compared to those patterns observed at sites further from outfalls or runoff. Due to varying solubilities and affinities for organic matter of the individual PAHs, partitioning of the heavier weight PAHs may enrich settling particles with high molecular weight PAHs. Lower molecular weight PAHs, having lower affinity for particles, may travel from the source to a greater extent.« less

Sedimentation and associated trace metal enrichment in the riparian zone of the Three Gorges Reservoir, China.

PubMed

Tang, Qiang; Bao, Yuhai; He, Xiubin; Zhou, Huaidong; Cao, Zhijing; Gao, Peng; Zhong, Ronghua; Hu, Yunhua; Zhang, Xinbao

2014-05-01

Impoundment of the Three Gorges Reservoir has created an artificial riparian zone with a vertical height of 30 m and a total area of 349 km(2), which has been subjected to seasonal inundation and exposure due to regular reservoir impoundment and the occurrence of natural floods. The significant alteration of hydrologic regime has caused numerous environmental changes. The present study investigated the magnitude and spatial pattern of sedimentation and metal enrichment in a typical section of the riparian zone, composed of bench terraces with previous agricultural land uses, and explored their links to the changed hydrologic regime. In particular, we measured the total sediment depths and collected surface riparian sediments and down-profile sectioned riparian soils (at 5 cm intervals) for trace metal determination. Our analysis showed that the annual average sedimentation rates varied from 0.5 to 10 cm·yr(-1) and they decreased significantly with increasing elevation. This lateral distribution was principally attributed to seasonal variations in water levels and suspended sediment concentrations. Enriched concentrations of trace metals were found both in the riparian sediments and soils, but they were generally higher in the riparian sediments than in riparian soils and followed a similar lateral decreasing trend. Metal contamination assessment showed that the riparian sediments were slightly contaminated by Ni, Zn, and Pb, moderately contaminated by Cu, and moderately to strongly contaminated by Cd; while riparian soils were slightly contaminated by As, and moderately contaminated by Cd. Trace metal enrichment in the riparian sediments may be attributed to external input of contaminated sediments produced from upstream anthropogenic sources and chemical adsorption from dissolved fractions during pure sediment mobilization and after sink for a prolonged flooding period due to reservoir impoundment. Copyright © 2014 Elsevier B.V. All rights reserved.

Arsenic enrichment in shelf and coastal sediment of the Brazilian subtropics

NASA Astrophysics Data System (ADS)

Mirlean, N.; Medeanic, S.; Garcia, F. A.; Travassos, M. P.; Baisch, P.

2012-03-01

High levels of As (i.e., above the nationally legislated threshold of 70 mg kg-1) were found in shelf sediment of the Espirito Santo state of Brazil. The elevated content of this metalloid propagated in the sediment to a depth of approximately 1.5 m. The adjacent beach sands and mangrove sediments were also enriched in As. The variation in As levels along the shelf sediment profiles was acompained by calcareous-material distribution, which reflects the paleogeographical circumstances that promote local reef development during the corresponding intervals of sedimentation. Arsenic-rich calcareous bioclast materials migrate to a beach from the surface horizon of nearby shelf sediment, thereby replacing the part of the As that previously entered the marine environment with eroded material from the continent to the littoral zone. The segment of the Brazilian tropical shelf that was studied clearly demonstrated that the As enrichment of the shelf sediment is determined by the exposure of the Barreiras formation on the coast and the development of reefs, which are favorable sites for the settling of bodies of biogenic carbonates.

Matrix protected organic matter in a river dominated margin: A possible mechanism to sequester terrestrial organic matter?

NASA Astrophysics Data System (ADS)

Mead, Ralph N.; Goñi, Miguel A.

2008-06-01

The provenance of organic matter in surface sediments from the northern Gulf of Mexico was investigated by analyzing the compositions of lipid biomarkers ( n-alkanes, fatty acids, sterols) liberated after a series of chemical treatments designed to remove different organo-mineral matrix associations (i.e. freely extractable, base-hydrolyzable, unhydrolyzable). Bulk analyses of the organic matter (carbon content, carbon:nitrogen ratios, stable and radiocarbon isotopic analyses) were also performed on the intact sediments and their non-hydrolyzable, demineralized residue. We found recognizable lipids from distinct sources, including terrestrial vascular plants, bacteria and marine algae and zooplankton, within each of the isolated fractions. Based on the lipid signatures and bulk compositions, the organic matter within the unhydrolyzable fractions appeared to be the most diagenetically altered, was the oldest in age, and had the highest abundance of terrigenous lipids. In contrast, the base-hydrolyzable fraction was the most diagentically unaltered, had the youngest ages and was most enriched in N and marine lipids. Our results indicate that fresh, autochthonous organic matter is the most important contributor to base-hydrolyzable lipids, whereas highly altered allochthonous sources appear to be predominant source of unhydrolyzable lipids in the surface sediments from the Atchafalaya River shelf. Overall, the lipid biomarker signatures of intact sediments were biased towards the autochthonous source because many of the organic compounds indicative of degraded, terrigenous sources were protected from extraction and saponification by organo-mineral matrices. It is only after these protective matrices were removed by treatment with HCl and HF that these compounds became evident.

A 1000-year record of dry conditions in the eastern Canadian prairies reconstructed from oxygen and carbon isotope measurements on Lake Winnipeg sediment organics

USGS Publications Warehouse

Buhay, W.M.; Simpson, S.; Thorleifson, H.; Lewis, M.; King, J.; Telka, A.; Wilkinson, Philip M.; Babb, J.; Timsic, S.; Bailey, D.

2009-01-01

A short sediment core (162 cm), covering the period AD 920-1999, was sampled from the south basin of Lake Winnipeg for a suite of multi-proxy analyses leading towards a detailed characterisation of the recent millennial lake environment and hydroclimate of southern Manitoba, Canada. Information on the frequency and duration of major dry periods in southern Manitoba, in light of the changes that are likely to occur as a result of an increasingly warming atmosphere, is of specific interest in this study. Intervals of relatively enriched lake sediment cellulose oxygen isotope values (??18Ocellulose) were found to occur from AD 1180 to 1230 (error range: AD 1104-1231 to 1160-1280), 1610-1640 (error range: AD 1571-1634 to 1603-1662), 1670-1720 (error range: AD 1643-1697 to 1692-1738) and 1750-1780 (error range: AD 1724-1766 to 1756-1794). Regional water balance, inferred from calculated Lake Winnipeg water oxygen isotope values (??18Oinf-lw), suggest that the ratio of lake evaporation to catchment input may have been 25-40% higher during these isotopically distinct periods. Associated with the enriched d??18Ocellulose intervals are some depleted carbon isotope values associated with more abundantly preserved sediment organic matter (d??13COM). These suggest reduced microbial oxidation of terrestrially derived organic matter and/or subdued lake productivity during periods of minimised input of nutrients from the catchment area. With reference to other corroborating evidence, it is suggested that the AD 1180-1230, 1610-1640, 1670-1720 and 1750-1780 intervals represent four distinctly drier periods (droughts) in southern Manitoba, Canada. Additionally, lower-magnitude and duration dry periods may have also occurred from 1320 to 1340 (error range: AD 1257-1363), 1530-1540 (error range: AD 1490-1565 to 1498-1572) and 1570-1580 (error range: AD 1531-1599 to 1539-1606). ?? 2009 John Wiley & Sons, Ltd.

Physico-Chemical Heterogeneity of Organic-Rich Sediments in the Rifle Aquifer, CO: Impact on Uranium Biogeochemistry.

PubMed

Janot, Noémie; Lezama Pacheco, Juan S; Pham, Don Q; O'Brien, Timothy M; Hausladen, Debra; Noël, Vincent; Lallier, Florent; Maher, Kate; Fendorf, Scott; Williams, Kenneth H; Long, Philip E; Bargar, John R

2016-01-05

The Rifle alluvial aquifer along the Colorado River in west central Colorado contains fine-grained, diffusion-limited sediment lenses that are substantially enriched in organic carbon and sulfides, as well as uranium, from previous milling operations. These naturally reduced zones (NRZs) coincide spatially with a persistent uranium groundwater plume. There is concern that uranium release from NRZs is contributing to plume persistence or will do so in the future. To better define the physical extent, heterogeneity and biogeochemistry of these NRZs, we investigated sediment cores from five neighboring wells. The main NRZ body exhibited uranium concentrations up to 100 mg/kg U as U(IV) and contains ca. 286 g of U in total. Uranium accumulated only in areas where organic carbon and reduced sulfur (as iron sulfides) were present, emphasizing the importance of sulfate-reducing conditions to uranium retention and the essential role of organic matter. NRZs further exhibited centimeter-scale variations in both redox status and particle size. Mackinawite, greigite, pyrite and sulfate coexist in the sediments, indicating that dynamic redox cycling occurs within NRZs and that their internal portions can be seasonally oxidized. We show that oxidative U(VI) release to the aquifer has the potential to sustain a groundwater contaminant plume for centuries. NRZs, known to exist in other uranium-contaminated aquifers, may be regionally important to uranium persistence.

Characterization of Fe (III)-reducing enrichment culture and isolation of Fe (III)-reducing bacterium Enterobacter sp. L6 from marine sediment.

PubMed

Liu, Hongyan; Wang, Hongyu

2016-07-01

To enrich the Fe (III)-reducing bacteria, sludge from marine sediment was inoculated into the medium using Fe (OH)3 as the sole electron acceptor. Efficiency of Fe (III) reduction and composition of Fe (III)-reducing enrichment culture were analyzed. The results indicated that the Fe (III)-reducing enrichment culture with the dominant bacteria relating to Clostridium and Enterobacter sp. had high Fe (III) reduction of (2.73 ± 0.13) mmol/L-Fe (II). A new Fe (III)-reducing bacterium was isolated from the Fe (III)-reducing enrichment culture and identified as Enterobacter sp. L6 by 16S rRNA gene sequence analysis. The Fe (III)-reducing ability of strain L6 under different culture conditions was investigated. The results indicated that strain L6 had high Fe (III)-reducing activity using glucose and pyruvate as carbon sources. Strain L6 could reduce Fe (III) at the range of NaCl concentrations tested and had the highest Fe (III) reduction of (4.63 ± 0.27) mmol/L Fe (II) at the NaCl concentration of 4 g/L. This strain L6 could reduce Fe (III) with unique properties in adaptability to salt variation, which indicated that it can be used as a model organism to study Fe (III)-reducing activity isolated from marine environment. Copyright © 2015 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Fractionation and risk assessment of Fe and Mn in surface sediments from coastal sites of Sonora, Mexico (Gulf of California).

PubMed

Jara-Marini, Martín E; García-Camarena, Raúl; Gómez-Álvarez, Agustín; García-Rico, Leticia

2015-07-01

The aim of this study was to evaluate Fe and Mn distribution in geochemical fractions of the surface sediment of four oyster culture sites in the Sonora coast, Mexico. A selective fractionation scheme to obtain five fractions was adapted for the microwave system. Surface sediments were analyzed for carbonates, organic matter contents, and Fe and Mn in geochemical fractions. The bulk concentrations of Fe ranged from 10,506 to 21,918 mg/kg (dry weight, dry wt), and the bulk concentrations of Mn ranged from 185.1 to 315.9 mg/kg (dry wt) in sediments, which was low and considered as non-polluted in all of the sites. The fractionation study indicated that the major geochemical phases for the metals were the residual, as well as the Fe and Mn oxide fractions. The concentrations of metals in the geochemical fractions had the following order: residual > Fe and Mn oxides > organic matter > carbonates > interchangeable. Most of the Fe and Mn were linked to the residual fraction. Among non-residual fractions, high percentages of Fe and Mn were linked to Fe and Mn oxides. The enrichment factors (EFs) for the two metals were similar in the four studied coasts, and the levels of Fe and Mn are interpreted as non-enrichment (EF < 1) because the metals concentrations were within the baseline concentrations. According to the environmental risk assessment codes, Fe and Mn posed no risk and low risk, respectively. Although the concentrations of Fe and Mn were linked to the residual fraction, the levels in non-residual fractions may significantly result in the transference of other metals, depending on several physico-chemical and biological factors.

Common hydraulic fracturing fluid additives alter the structure and function of anaerobic microbial communities

USGS Publications Warehouse

Mumford, Adam C.; Akob, Denise M.; Klinges, J. Grace; Cozzarelli, Isabelle M.

2018-01-01

The development of unconventional oil and gas (UOG) resources results in the production of large volumes of wastewater containing a complex mixture of hydraulic fracturing chemical additives and components from the formation. The release of these wastewaters into the environment poses potential risks that are poorly understood. Microbial communities in stream sediments form the base of the food chain and may serve as sentinels for changes in stream health. Iron-reducing organisms have been shown to play a role in the biodegradation of a wide range of organic compounds, and so to evaluate their response to UOG wastewater, we enriched anaerobic microbial communities from sediments collected upstream (background) and downstream (impacted) of an UOG wastewater injection disposal facility in the presence of hydraulic fracturing fluid (HFF) additives: guar gum, ethylene glycol, and two biocides, 2,2-dibromo-3-nitrilopropionamide (DBNPA) and bronopol (C3H6BrNO4). Iron reduction was significantly inhibited early in the incubations with the addition of biocides, whereas amendment with guar gum and ethylene glycol stimulated iron reduction relative to levels in the unamended controls. Changes in the microbial community structure were observed across all treatments, indicating the potential for even small amounts of UOG wastewater components to influence natural microbial processes. The microbial community structure differed between enrichments with background and impacted sediments, suggesting that impacted sediments may have been preconditioned by exposure to wastewater. These experiments demonstrated the potential for biocides to significantly decrease iron reduction rates immediately following a spill and demonstrated how microbial communities previously exposed to UOG wastewater may be more resilient to additional spills.

Remobilization of polycyclic aromatic hydrocarbons and organic matter in seawater during sediment resuspension experiments from a polluted coastal environment: Insights from Toulon Bay (France).

PubMed

Guigue, Catherine; Tedetti, Marc; Dang, Duc Huy; Mullot, Jean-Ulrich; Garnier, Cédric; Goutx, Madeleine

2017-10-01

Polycyclic aromatic hydrocarbons (PAHs) and organic matter contents were measured in seawater during resuspension experiments using sediments collected from Toulon Bay (Northwestern Mediterranean Sea, France). The studied sediments were very highly contaminated in PAHs, especially in 4-ring compounds emitted from combustion processes. The sediments used for resuspension experiments were collected at 0-2 cm (diagenetically new organic matter, OM) and 30-32 cm depths (diagenetically transformed OM). They were both mostly composed of fine particles (<63 μm), enriched in organic carbon (8.2 and 6.3%, respectively) and in PAHs (concentration of Σ34 PAHs: 38.2 and 35.7 × 10 3  ng g -1 , respectively). The resuspension of these sediments led to an increase in concentrations of dissolved Σ34 PAHs, dissolved organic carbon (DOC) and dissolved humic- and tryptophan-like fluorophores in seawater up to 10-, 1.3-, 4.4- and 5.7-fold, respectively. The remobilization in seawater was higher for 4-6 ring PAHs, especially benzo(g,h,i)perylene, whose concentration exceeded the threshold values of the European Water Framework Directive. This noted the potential harmful effects of sediment resuspension on marine biota. From these sediment resuspension experiments, we determined OC-normalized partition coefficients of PAHs between sediment and water (K oc ) and found that during such events, the transfer of PAHs from sediment particles to seawater was lower than that predicted from octanol-water partition coefficients (K ow ) (i.e., measured K oc  > K oc predicted from K ow ). The results confirmed the sequestration role of sedimentary OC quality and grain size on PAHs; the OM diagenetic state seemed to impact the partition process but in a relatively minor way. Furthermore, differences were observed between 2-4 ring and 5-6 ring PAHs, with the latter displaying a relatively higher mobility towards seawater. These differences may be explained by the distribution of these two PAH pools within different OM moieties, such as humic substances and black carbon. Copyright © 2017 Elsevier Ltd. All rights reserved.

The nature of organic carbon in density-fractionated sediments in the Sacramento-San Joaquin River Delta (California)

NASA Astrophysics Data System (ADS)

Wakeham, S. G.; Canuel, E. A.

2016-02-01

Rivers are the primary means by which sediments and carbon are transported from the terrestrial biosphere to the oceans but gaps remain in our understanding of carbon associations from source to sink. Bed sediments from the Sacramento-San Joaquin River Delta (CA) were fractionated according to density and analyzed for sediment mass distribution, elemental (C and N) composition, mineral surface area, and stable carbon and radiocarbon isotope compositions of organic carbon (OC) and fatty acids to evaluate the nature of organic carbon in river sediments. OC was unevenly distributed among density fractions. Mass and OC were in general concentrated in mesodensity (1.6-2.0 and 2.0-2.5 g cm-3) fractions, comprising 84.0 ± 1.3 % of total sediment mass and 80.8 ± 13.3 % of total OC (TOC). Low-density (< 1.6 g cm-3) material, although rich in OC (34.0 ± 2.0 % OC) due to woody debris, constituted only 17.3 ± 12.8 % of TOC. High-density (> 2.5 g cm-3) organic-poor, mineral-rich material made-up 13.7 ± 1.4 % of sediment mass and 2.0 ± 0.9 % of TOC. Stable carbon isotope compositions of sedimentary OC were relatively uniform across bulk and density fractions (δ13C -27.4 ± 0.5 ‰). Radiocarbon content varied from Δ14C values of -382 (radiocarbon age 3800 yr BP) to +94 ‰ (modern) indicating a mix of young and old OC. Fatty acids were used to further constrain the origins of sedimentary OC. Short-chain n-C14-n-C18 fatty acids of algal origin were depleted in 13C (δ13C -37.5 to -35.2 ‰) but were enriched in 14C (Δ14C > 0) compared to long-chain n-C24-n-C28 acids of vascular plant origins with higher δ13C (-33.0 to -31.0 ‰) but variable Δ14C values (-180 and 61 ‰). These data demonstrate the potentially complex source and age distributions found within river sediments and provide insights about sediment and organic matter supply to the Delta.

Methane sources and production in the northern Cascadia margin gas hydrate system

USGS Publications Warehouse

Pohlman, J.W.; Kaneko, M.; Heuer, V.B.; Coffin, R.B.; Whiticar, M.

2009-01-01

The oceanographic and tectonic conditions of accretionary margins are well-suited for several potential processes governing methane generation, storage and release. To identify the relevant methane evolution pathways in the northern Cascadia accretionary margin, a four-site transect was drilled during Integrated Ocean Drilling Program Expedition 311. The ??13C values of methane range from a minimum value of - 82.2??? on an uplifted ridge of accreted sediment near the deformation front (Site U1326, 1829 mbsl, meters below sea level) to a maximum value of - 39.5??? at the most landward location within an area of steep canyons near the shelf edge (Site U1329, 946 mbsl). An interpretation based solely on methane isotope values might conclude the 13C-enrichment of methane indicates a transition from microbially- to thermogenically-sourced methane. However, the co-existing CO2 exhibits a similar trend of 13C-enrichment along the transect with values ranging from - 22.5??? to +25.7???. The magnitude of the carbon isotope separation between methane and CO2 (??c = 63.8 ?? 5.8) is consistent with isotope fractionation during microbially mediated carbonate reduction. These results, in conjunction with a transect-wide gaseous hydrocarbon content composed of > 99.8% (by volume) methane and uniform ??DCH4 values (- 172??? ?? 8) that are distinct from thermogenic methane at a seep located 60 km from the Expedition 311 transect, suggest microbial CO2 reduction is the predominant methane source at all investigated sites. The magnitude of the intra-site downhole 13C-enrichment of CO2 within the accreted ridge (Site U1326) and a slope basin nearest the deformation front (Site U1325, 2195 mbsl) is ~ 5???. At the mid-slope site (Site U1327, 1304 mbsl) the downhole 13C-enrichment of the CO2 is ~ 25??? and increases to ~ 40??? at the near-shelf edge Site U1329. This isotope fractionation pattern is indicative of more extensive diagenetic alteration at sites with greater 13C-enrichment. The magnitude of the 13C-enrichment of CO2 correlates with decreasing sedimentation rates and a diminishing occurrence of stratigraphic gas hydrate. We suggest the decreasing sedimentation rates increase the exposure time of sedimentary organic matter to aerobic and anaerobic degradation, during burial, thereby reducing the availability of metabolizable organic matter available for methane production. This process is reflected in the occurrence and distribution of gas hydrate within the northern Cascadia margin accretionary prism. Our observations are relevant for evaluating methane production and the occurrence of stratigraphic gas hydrate within other convergent margins.

Deep subsurface life from North Pond: Enrichment, isolation, characterization and genomes of heterotrophic bacteria

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Joseph A.; Leon-Zayas, Rosa; Wrighton, Kelly

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic watercolumn west of the Mid-Atlantic Ridge at 22° N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sedimentmore » column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. Furthermore, the cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.« less

Deep subsurface life from North Pond: Enrichment, isolation, characterization and genomes of heterotrophic bacteria

DOE PAGES

Russell, Joseph A.; Leon-Zayas, Rosa; Wrighton, Kelly; ...

2016-05-10

Studies of subsurface microorganisms have yielded few environmentally relevant isolates for laboratory studies. In order to address this lack of cultivated microorganisms, we initiated several enrichments on sediment and underlying basalt samples from North Pond, a sediment basin ringed by basalt outcrops underlying an oligotrophic watercolumn west of the Mid-Atlantic Ridge at 22° N. In contrast to anoxic enrichments, growth was observed in aerobic, heterotrophic enrichments from sediment of IODP Hole U1382B at 4 and 68 m below seafloor (mbsf). These sediment depths, respectively, correspond to the fringes of oxygen penetration from overlying seawater in the top of the sedimentmore » column and upward migration of oxygen from oxic seawater from the basalt aquifer below the sediment. Here we report the enrichment, isolation, initial characterization and genomes of three isolated aerobic heterotrophs from North Pond sediments; an Arthrobacter species from 4 mbsf, and Paracoccus and Pseudomonas species from 68 mbsf. These cultivated bacteria are represented in the amplicon 16S rRNA gene libraries created from whole sediments, albeit at low (up to 2%) relative abundance. We provide genomic evidence from our isolates demonstrating that the Arthrobacter and Pseudomonas isolates have the potential to respire nitrate and oxygen, though dissimilatory nitrate reduction could not be confirmed in laboratory cultures. Furthermore, the cultures from this study represent members of abundant phyla, as determined by amplicon sequencing of environmental DNA extracts, and allow for further studies into geochemical factors impacting life in the deep subsurface.« less

Sedimentary records of eutrophication and hypoxia in the Changjiang Estuary over the last 100 years

NASA Astrophysics Data System (ADS)

Xuwen, F.; Hongliang, L.; Zhao, M.; Xuefa, S.

2012-12-01

We selected two cores in the Changjiang Estuary, one located in the Changjiang Estuary mud area (CEMA) within the region of seasonal hypoxia, the other located in the Cheju Island mud area (SCIMA) and outside the hypoxia region. The grain size, total organic carbon (TOC), stable carbon isotopic ratios (δ13 Corg), biomarkers (the sum of brassicasterol, dinosterol and alkenone) and some redox sensitive elements (RSEs) were determined on the 210Pb-dated sediment cores to study potential hundrend-years eutrophication and hypoxia. The sediment record in CEMA showed that an increase in TOC (21%), biomarkers (141%) and δ13 Corg (1.6‰PDB ) occurred since 1950s and a marked increase since 1970s. These distributions indicated the enhanced productivity and establshed the history of eutrophication in the Changjiang Estuary during the past 100 years. Some RSEs have been enriched significantly since the late 1960s to 1970s, the rates of Mo/Al, Cd/Al and As/Al increased about 83%, 73% and 50% respectively. These data may indicate the onset of hypoxia in the Changjiang Estuary during the last 100 years. The increasing of marine organic matter and RSEs accumulation was corresponding with the fertilizer consumption and high nutrient inputs from the Changjiang River. The riverine runoff of fertilizers and nutrients stimulated the algae (e g. brassicasterol, dinosterol) blooming. Enhanced primary production resulted in an enrichment of organic matter and hypoxia invoked organic matter preserved in the sediment. For the core sediment in SCIMA, the geochemical indicators (TOC, biomarkers and δ13Corg ) increased in difference degrees before 1950s~1970s and then were almost the constant. Productivity in the SCIMA have been mainly influenced by climate ocean circulation changes over the last 100 years. The RSEs were controlled by "grain size effects" which indicated no hypoxia occurred. This study concluded that δ13 Corg, RSEs and biomarkers in sediment could be used to trace or reconstruct history of the coastal eutrophication and hypoxia in the high productivity zone in the Changjiang Estuary. These parameters gave the same conclusions consistently: affected by the anthropogenic activities, eutrophication in the Changjiang Estuary and its adjacent region began in 1950s and accelerated in 1970s, then the enhanced eutrophication has caused and developed hypoxia since 1970s which has been fueled and showed the increasing trend.

Hydrothermal Alteration Promotes Humic Acid Formation in Sediments: A Case Study of the Central Indian Ocean Basin

NASA Astrophysics Data System (ADS)

Sarma, Nittala S.; Kiran, Rayaprolu; Rama Reddy, M.; Iyer, Sridhar D.; Peketi, A.; Borole, D. V.; Krishna, M. S.

2018-01-01

Anomalously high concentrations of humic-rich dissolved organic matter (DOM) in extant submarine hydrothermal vent plumes traveled far from source are increasingly being reported. This DOM, able to mobilize trace metals (e.g., Fe2+) has been hypothesized as originating from organic matter produced by thermogenic bacteria. To eliminate a possible abiogenic origin of this DOM, study is required of well-preserved organic compounds that can be attributed to thermogenic bacteria. The Central Indian Ocean Basin (CIOB) is part of a diffuse plate boundary and an intraplate deformation zone. Coarse fraction (>63 µ) characteristics, mineralogy, magnetic susceptibility, and geochemistry were examined in sediments of a core raised close to a north-south fracture zone near the Equator. Two horizons of distinctly brown-colored sediments were shown as hydrothermally altered from their charred fragments and geochemistry (CaCO3, Corg, Ti/Al, Al/(Al + Fe + Mn), Sr/Ba, Mg/Li, Mn micronodules, Fe/Mn). We examined whether humic substances were preserved in these sediments, and if so whether their carbon isotope distribution would support their hydrothermal origin. Alkali extraction of sediments afforded humic acids (HA) in yields up to 1.2% in the brown sediments. The remaining portions of the core had nil or low concentrations of HA. The carbon of hydrothermal HA is isotopically heavier (average δ13C, ˜ -16.3‰) compared to nonhydrothermal HA (-18.1‰), suggesting that they were probably formed from organic matter that remained after elimination of lighter carbon enriched functional groups during diagenesis. The results provide compelling evidence of HA formation from lipids originating from thermogenic bacteria.

Sedimentology and geochemistry of mud volcanoes in the Anaximander Mountain Region from the Eastern Mediterranean Sea.

PubMed

Talas, Ezgi; Duman, Muhammet; Küçüksezgin, Filiz; Brennan, Michael L; Raineault, Nicole A

2015-06-15

Investigations carried out on surface sediments collected from the Anaximander mud volcanoes in the Eastern Mediterranean Sea to determine sedimentary and geochemical properties. The sediment grain size distribution and geochemical contents were determined by grain size analysis, organic carbon, carbonate contents and element analysis. The results of element contents were compared to background levels of Earth's crust. The factors that affect element distribution in sediments were calculated by the nine push core samples taken from the surface of mud volcanoes by the E/V Nautilus. The grain size of the samples varies from sand to sandy silt. Enrichment and Contamination factor analysis showed that these analyses can also be used to evaluate of deep sea environmental and source parameters. It is concluded that the biological and cold seep effects are the main drivers of surface sediment characteristics from the Anaximander mud volcanoes. Copyright © 2015 Elsevier Ltd. All rights reserved.

Reactive iron and manganese in estuarine sediments of the Baltic Sea: Impacts of flocculation and redox shuttling

NASA Astrophysics Data System (ADS)

Jilbert, Tom; Tiihonen, Rosa; Myllykangas, Jukka-Pekka; Asmala, Eero; Hietanen, Susanna

2016-04-01

Iron (Fe) and manganese (Mn) play important roles in sedimentary carbon cycling in both freshwater and marine systems. Dissimilatory reduction of Fe and Mn oxides is known to be a major pathway of suboxic organic matter remineralization in surface sediments, while recent studies have shown that Fe and Mn oxides may be involved in the anaerobic oxidation of methane deeper in the sediment column (e.g., Egger et al., 2015). Estuaries are transitional environments, characterized by gradients of salinity and redox conditions which impact on the mobility of Fe and Mn. In turn, the distribution of Fe and Mn in estuarine sediments, and the role of the two metals in carbon cycling, is expected to be spatially heterogeneous. However, few studies have attempted to describe the sedimentary distribution of Fe and Mn in the context of processes occurring in the estuarine water column. In particular, salinity-driven flocculation and redox shuttling are two key processes whose relative impacts on sedimentary Fe and Mn have not been clearly demonstrated. In this study we investigated the coupled water column and sedimentary cycling of Fe and Mn along a 60km non-tidal estuarine transect in the Gulf of Finland, Baltic Sea. We show that riverine Fe entering the estuary as colloidal oxides associated with dissolved organic matter (DOM) is quickly flocculated and sedimented within 5 km of the river mouth, despite the shallow lateral salinity gradient. Sediments within this range are enriched in Fe (up to twice the regional average), principally in the form of crystalline Fe oxides as determined by sequential extractions. The high crystallinity implies relative maturity of the oxide mineralogy, likely due to sustained oxic conditions and long residence time in the river catchment. Despite the reducing conditions below the sediment-water interface, Fe is largely retained in the sediments close to the river mouth. In contrast, sedimentary Mn concentrations are highest in a deep silled basin more than 10km downstream. Throughout the estuary, Mn oxides are reductively dissolved shallower in the sediment column than Fe oxides, resulting in strong effluxes of dissolved Mn from the sediments. Subsequent oxidation of bottom water dissolved Mn to particulate oxides and lateral transport ("redox shuttling") account for the sedimentary Mn enrichments in the deep silled basin. Porewater data suggest that the heterogeneity of Fe and Mn availability in the estuarine sediments may influence the relative importance of the two metals for anaerobic oxidation of methane. Egger, M. et al., Environmental Science and Technology 49(1), 277-283, 2015.

A marine biogeochemical perspective on black shale deposition

NASA Astrophysics Data System (ADS)

Piper, D. Z.; Calvert, S. E.

2009-06-01

Deposition of marine black shales has commonly been interpreted as having involved a high level of marine phytoplankton production that promoted high settling rates of organic matter through the water column and high burial fluxes on the seafloor or anoxic (sulfidic) water-column conditions that led to high levels of preservation of deposited organic matter, or a combination of the two processes. Here we review the hydrography and the budgets of trace metals and phytoplankton nutrients in two modern marine basins that have permanently anoxic bottom waters. This information is then used to hindcast the hydrography and biogeochemical conditions of deposition of a black shale of Late Jurassic age (the Kimmeridge Clay Formation, Yorkshire, England) from its trace metal and organic carbon content. Comparison of the modern and Jurassic sediment compositions reveals that the rate of photic zone primary productivity in the Kimmeridge Sea, based on the accumulation rate of the marine fraction of Ni, was as high as 840 g organic carbon m - 2 yr -1. This high level was possibly tied to the maximum rise of sea level during the Late Jurassic that flooded this and other continents sufficiently to allow major open-ocean boundary currents to penetrate into epeiric seas. Sites of intense upwelling of nutrient-enriched seawater would have been transferred from the continental margins, their present location, onto the continents. This global flooding event was likely responsible for deposition of organic matter-enriched sediments in other marine basins of this age, several of which today host major petroleum source rocks. Bottom-water redox conditions in the Kimmeridge Sea, deduced from the V:Mo ratio in the marine fraction of the Kimmeridge Clay Formation, varied from oxic to anoxic, but were predominantly suboxic, or denitrifying. A high settling flux of organic matter, a result of the high primary productivity, supported a high rate of bacterial respiration that led to the depletion of O 2 in the bottom water. A high rate of burial of labile organic matter, albeit a low percentage of primary productivity, in turn promoted anoxic conditions in the sediment pore waters that enhanced retention of trace metals deposited from the water column.

The spread of marine anoxia on the northern Tethys margin during the Paleocene-Eocene Thermal Maximum

NASA Astrophysics Data System (ADS)

Dickson, Alexander J.; Rees-Owen, Rhian L.; März, Christian; Coe, Angela L.; Cohen, Anthony S.; Pancost, Richard D.; Taylor, Kyle; Shcherbinina, Ekaterina

2014-06-01

Records of the paleoenvironmental changes that occurred during the Paleocene-Eocene Thermal Maximum (PETM) are preserved in sedimentary rocks along the margins of the former Tethys Ocean and Peri-Tethys. This paper presents new geochemical data that constrain paleoproductivity, sediment delivery, and seawater redox conditions, from three sites that were located in the Peri-Tethys region. Trace and major element, iron speciation, and biomarker data indicate that water column anoxia was established during episodes when inputs of land-derived higher plant organic carbon and highly weathered detrital clays and silts became relatively higher. Anoxic conditions are likely to have been initially caused by two primary processes: (i) oxygen consumption by high rates of marine productivity, initially stimulated by the rapid delivery of terrestrially derived organic matter and nutrients, and (ii) phosphorus regeneration from seafloor sediments. The role of the latter process requires further investigation before its influence on the spread of deoxygenated seawater during the PETM can be properly discerned. Other oxygen-forcing processes, such as temperature/salinity-driven water column stratification and/or methane oxidation, are considered to have been relatively less important in the study region. Organic carbon enrichments occur only during the initial stages of the PETM as defined by the negative carbon isotope excursions at each site. The lack of observed terminal stage organic carbon enrichment does not support a link between PETM climate recovery and the sequestration of excess atmospheric CO2 as organic carbon in this region; such a feedback may, however, have been important in the early stages of the PETM.

Nitrogen enrichment in runoff sediments as affected by soil texture in Beijing mountain area.

PubMed

Yang, Yang; Ye, Zhihan; Liu, Baoyuan; Zeng, Xianqin; Fu, Suhua; Lu, Bingjun

2014-02-01

Enrichment ratio (ER) is widely used in nonpoint source pollution models to estimate the nutrient loss associated with soil erosion. The objective of this study was to determine the ER of total nitrogen (ERN) in the sediments eroded from the typical soils with varying soil textures in Beijing mountain area. Each of the four soils was packed into a 40 by 30 by 15 cm soil pan and received 40-min simulated rainfalls at the intensity of 90 mm h(-1) on five slopes. ERN for most sediments were above unity, indicating the common occurrence of nitrogen enrichment accompanied with soil erosion in Beijing mountain area. Soil texture was not the only factor that influenced N enrichment in this experiment since the ERN for the two fine-textured soils were not always lower. Soil properties such as soil structure might exert a more important influence in some circumstances. The selective erosion of clay particles was the main reason for N enrichment, as implied by the significant positive correlation between the ER of total nitrogen and clay fraction in eroded sediments. Significant regression equations between ERN and sediment yield were obtained for two pairs of soils, which were artificially categorized by soil texture. The one for fine-textured soils had greater intercept and more negative slope. Thus, the initially higher ERN would be lower than that for the other two soils with coarser texture once the sediment yield exceeded 629 kg ha(-1).

Lignin geochemistry of sediments from the Narragansett Bay Estuary

NASA Astrophysics Data System (ADS)

Requejo, A. G.; Brown, John S.; Boehm, Paul D.

1986-12-01

Cupric oxide oxidation has been employed to characterize the lignin geochemistry of Narragansett Bay sediments. Lignin concentrations throughout the estuary are low when expressed on a carbon-normalized basis, but can be characterized as enriched when expressed on a mass-normalized basis. This implies substantial dilution of the sedimentary lignin by inputs of lignin-poor carbon. Lignin concentrations do not correlate with the 13C isotopic composition of the sedimentary organic matter. These results are consistent with a sediment lignin component consisting of varying amounts of vascular plant debris and lignin-depleted organic matter, the latter originating from both marine (planktonic) and terrestrial (uncharacterized) sources. Compositional plots of lignin-derived phenols show that sediments in the upper estuary are influenced to a greater extent by gymnosperm lignin sources than those in the mid-and lower estuary. Given the extent to which the upper estuary is affected by pollution sources, inputs from anthropogenic discharges are the most likely cause of these compositional differences. However, an evaluation of processed paper products as an "anthropogenic" lignin source indicates that the lignin content of these materials is insufficient to account for the levels found in the sediments. Subsurface lignin compositions at an upper estuary site reveal that lignin originating from the inferred anthropogenic sources disappears at a depth shallower than that which would be expected based on the distribution of other trace organic pollutants (hydrocarbons and several synthetic organic compounds). We speculate that differences in either the depositional history or the degree of preservation of these two compound classes are responsible for the observed trends.

[Concentrations and Distribution of Metals in the Core Sediments from Estuary and City Section of Liaohe River].

PubMed

Wang, Wei-jie; Zhou, Jun-li; Pei, Shu-wei; Liu, Zheng-tao

2016-01-15

The particle size, total organic carbon (TOC), total nitrogen (TN), C/N ratio and metal concentrations as well as activities of 210Pb were determined in Liaohe River estuary area (LN-2) and Shenyang area (LN-5), and the organic matter resources were discussed in two core sediments. Also the index of geoaccumulation (Igeo) and enrichment factors (EFs) methods were applied to evaluate the state of heavy metal contamination in the studied sties. The study showed that both sediment cores LN-2 and LN-5 were dominated by silts, and the vertical variations of grain-size composition and organic matter were well distributed in LN- 2 while fluctuated in LN-5. According to the organic matter source analysis through C/N ratio, C/N ratio varied in the scale of 5. 24-7.93 in LN-2 which was dominated by river source, and 9.94-14.21 in LN-5 which was dominated by terrestrial input. Al, Ca, Fe, Mn, Ni, Cu, Zn, Cd, Pb and Cr in two sediment cores had different vertical changing rules, Ni and Zn in LN-2 as well as Pb and Zn in LN-5 were affected by both natural and human factors, other elements had similar distributions to those of organic matters, which showed that these elements were mainly affected by the natural activities. Based on Igeo and EFs, both sediment cores were more severely polluted with Ni, Zn and Pb than other metals. The effects of human activities on the environment were also discussed in this study, combined with the economical development of Liaoning Province and the studied sites in the past 20 years.

Thermal plasma treatment of stormwater sediments: comparison between DC non-transferred and partially transferred arc plasma.

PubMed

Li, O L; Guo, Y; Chang, J S; Saito, N

2015-01-01

The disposal of enormous amount of stormwater sediments becomes an emerging worldwide problem. Stormwater sediments are contaminated by heavy metals, phosphorus, trace organic and hydrocarbons, and cannot be disposed without treatment. Thermal plasma decontamination technology offers a high decomposition rate in a wide range of toxic organic compound and immobilization of heavy metal. In this study, we compared the treatment results between two different modes of thermal plasma: (1) a non-transferred direct current (DC) mode and (2) a partial DC-transferred mode. The reductions of total organic carbon (TOC) were, respectively, 25% and 80% for non-transferred and partially transferred plasma, respectively. Most of the toxic organic compounds were converted majorly to CxHy. In the gaseous emission, the accumulated CxHy, CO, NO and H2S were significantly higher in partially transferred mode than in non-transferred mode. The solid analysis demonstrated that the concentrations of Ca and Fe were enriched by 500% and 40%, respectively. New chemical compositions such as KAlSi3O8, Fe3O4, NaCl and CaSO4 were formed after treatment in partially DC-transferred mode. The power inputs were 1 and 10 kW, respectively, for non-transferred DC mode and a partially DC-transferred mode. With a lower energy input, non-transferred plasma treatment can be used for decontamination of sediments with low TOC and metal concentration. Meanwhile, partially transferred thermal plasma with higher energy input is suitable for treating sediments with high TOC percentage and volatile metal concentration. The organic compounds are converted into valuable gaseous products which can be recycled as an energy source.

Biogeochemical malfunctioning in sediments beneath a deep-water fish farm.

PubMed

Valdemarsen, Thomas; Bannister, Raymond J; Hansen, Pia K; Holmer, Marianne; Ervik, Arne

2012-11-01

We investigated the environmental impact of a deep water fish farm (190 m). Despite deep water and low water currents, sediments underneath the farm were heavily enriched with organic matter, resulting in stimulated biogeochemical cycling. During the first 7 months of the production cycle benthic fluxes were stimulated >29 times for CO(2) and O(2) and >2000 times for NH(4)(+), when compared to the reference site. During the final 11 months, however, benthic fluxes decreased despite increasing sedimentation. Investigations of microbial mineralization revealed that the sediment metabolic capacity was exceeded, which resulted in inhibited microbial mineralization due to negative feed-backs from accumulation of various solutes in pore water. Conclusions are that (1) deep water sediments at 8 °C can metabolize fish farm waste corresponding to 407 and 29 mmol m(-2) d(-1) POC and TN, respectively, and (2) siting fish farms at deep water sites is not a universal solution for reducing benthic impacts. Copyright © 2012 Elsevier Ltd. All rights reserved.

Identification of potential fish carcinogens in sediment from Hamilton Harbour, Ontario, Canada

DOE Office of Scientific and Technical Information (OSTI.GOV)

Balch, G.C.; Metcalfe, C.D.; Huestis, S.Y.

1995-01-01

A carcinogenicity- and mutagenicity-directed fractionation approach was used to identify the carcinogenic compounds in contaminated sediments that are putatively responsible for the high prevalence of tumors in bottom-dwelling fish from Hamilton Harbour, Ontario. Mutagenic activity was detected with Ames tester strains (TA98, TA100) in relatively nonpolar fractions of sediment extract containing PAHs and nitrogen-containing aromatic compounds (NCACs). These fractions were also carcinogenic in an in vivo carcinogenicity bioassay with rainbow trout (Oncorhynchus mykiss). When a more polar extract fraction was tested for mutagenicity and carcinogenicity, weak mutagenic activity was detected with an O-acetyltransferase-enriched Ames tester strain (YG1024), and weak carcinogenicmore » activity was detected in the rainbow trout assay. These data indicate that PAHs in contaminated Hamilton Harbour sediments are potent fish carcinogens, but it is also evident that other organic compounds in the sediment, such as NCACs and nitroarenes, may contribute to carcinogenicity.« less

Heavy metal assessment in surface sediments off Coromandel Coast of India: Implication on marine pollution.

PubMed

N, Anbuselvan; D, Senthil Nathan; M, Sridharan

2018-06-01

The present study investigates the distribution of heavy metals (Fe, Cd, Co, Cr, Cu, Ni, Zn and Pb) in the surface sediments along the Coromandel Coast of Bay of Bengal as an indicator of marine pollution. Pollution indices such as Contamination factor (CF), Enrichment factor (EF) and Geo-accumulation index (I) were performed to assess the spatial distribution and pollution status of the study area. The heavy metal concentration in the study area is closely associated with grain size and organic matter. Both geoaccumulation index and metal contamination factor indicate that the sediments are free from contamination with regards to the metals Cr and Ni, followed by uncontamination to moderate contamination of Co, Cu and Zn. However, sediments are found to be extremely polluted with respect to Cd and Pb. Factor analysis reveals that the accumulation of these heavy metals in the shelf sediments are due to anthropogenic inputs from the adjacent land area. Copyright © 2018 Elsevier Ltd. All rights reserved.

Assessment of trace metal pollution in sediments and intertidal fauna at the coast of Cameroon.

PubMed

Ngeve, Magdalene N; Leermakers, Martine; Elskens, Marc; Kochzius, Marc

2015-06-01

Coastal systems act as a boundary between land and sea. Therefore, assessing pollutant concentrations at the coast will provide information on the impact that land-based anthropogenic activities have on marine ecosystems. Sediment and fauna samples from 13 stations along the whole coast of Cameroon were analyzed to assess the level of trace metal pollution in sediments and intertidal fauna. Sediments showed enrichment of As, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, V, and Zn. However, pollution of greater concern was observed for Cd, Cr, Cu, Ni, and Zn at the northern stations. Some sites recorded trace metal levels higher than recommended in sediment quality guidelines. Species diversity was low, and high bioaccumulation of trace metals was observed in biological samples. Some edible gastropod species accumulated trace metals above the safety limits of the World Health Organization, European Medicine Agency, and the US Environment Protection Agency. Although industrial pollution is significant along Cameroon's coast, natural pollution from the volcano Mount Cameroon is also of concern.

Diversity and Distribution of Prokaryotes within a Shallow-Water Pockmark Field.

PubMed

Giovannelli, Donato; d'Errico, Giuseppe; Fiorentino, Federica; Fattorini, Daniele; Regoli, Francesco; Angeletti, Lorenzo; Bakran-Petricioli, Tatjana; Vetriani, Costantino; Yücel, Mustafa; Taviani, Marco; Manini, Elena

2016-01-01

Pockmarks are crater-like depression on the seafloor associated with hydrocarbon ascent through muddy sediments in continental shelves around the world. In this study, we examine the diversity and distribution of benthic microbial communities at shallow-water pockmarks adjacent to the Middle Adriatic Ridge. We integrate microbial diversity data with characterization of local hydrocarbons concentrations and sediment geochemistry. Our results suggest these pockmarks are enriched in sedimentary hydrocarbons, and host a microbial community dominated by Bacteria, even in deeper sediment layers. Pockmark sediments showed higher prokaryotic abundance and biomass than surrounding sediments, potentially due to the increased availability of organic matter and higher concentrations of hydrocarbons linked to pockmark activity. Prokaryotic diversity analyses showed that the microbial communities of these shallow-water pockmarks are unique, and comprised phylotypes associated with the cycling of sulfur and nitrate compounds, as well as numerous know hydrocarbon degraders. Altogether, this study suggests that shallow-water pockmark habitats enhance the diversity of the benthic prokaryotic biosphere by providing specialized environmental niches.

Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone

PubMed Central

Futagami, Taiki; Morono, Yuki; Terada, Takeshi; Kaksonen, Anna H.; Inagaki, Fumio

2013-01-01

Halogenated organic matter buried in marine subsurface sediment may serve as a source of electron acceptors for anaerobic respiration of subseafloor microbes. Detection of a diverse array of reductive dehalogenase-homologous (rdhA) genes suggests that subseafloor organohalide-respiring microbial communities may play significant ecological roles in the biogeochemical carbon and halogen cycle in the subseafloor biosphere. We report here the spatial distribution of dehalogenation activity in the Nankai Trough plate-subduction zone of the northwest Pacific off the Kii Peninsula of Japan. Incubation experiments with slurries of sediment collected at various depths and locations showed that degradation of several organohalides tested only occurred in the shallow sedimentary basin, down to 4.7 metres below the seafloor, despite detection of rdhA in the deeper sediments. We studied the phylogenetic diversity of the metabolically active microbes in positive enrichment cultures by extracting RNA, and found that Desulfuromonadales bacteria predominate. In addition, for the isolation of genes involved in the dehalogenation reaction, we performed a substrate-induced gene expression screening on DNA extracted from the enrichment cultures. Diverse DNA fragments were obtained and some of them showed best BLAST hit to known organohalide respirers such as Dehalococcoides, whereas no functionally known dehalogenation-related genes such as rdhA were found, indicating the need to improve the molecular approach to assess functional genes for organohalide respiration. PMID:23479745

Distribution of dehalogenation activity in subseafloor sediments of the Nankai Trough subduction zone.

PubMed

Futagami, Taiki; Morono, Yuki; Terada, Takeshi; Kaksonen, Anna H; Inagaki, Fumio

2013-04-19

Halogenated organic matter buried in marine subsurface sediment may serve as a source of electron acceptors for anaerobic respiration of subseafloor microbes. Detection of a diverse array of reductive dehalogenase-homologous (rdhA) genes suggests that subseafloor organohalide-respiring microbial communities may play significant ecological roles in the biogeochemical carbon and halogen cycle in the subseafloor biosphere. We report here the spatial distribution of dehalogenation activity in the Nankai Trough plate-subduction zone of the northwest Pacific off the Kii Peninsula of Japan. Incubation experiments with slurries of sediment collected at various depths and locations showed that degradation of several organohalides tested only occurred in the shallow sedimentary basin, down to 4.7 metres below the seafloor, despite detection of rdhA in the deeper sediments. We studied the phylogenetic diversity of the metabolically active microbes in positive enrichment cultures by extracting RNA, and found that Desulfuromonadales bacteria predominate. In addition, for the isolation of genes involved in the dehalogenation reaction, we performed a substrate-induced gene expression screening on DNA extracted from the enrichment cultures. Diverse DNA fragments were obtained and some of them showed best BLAST hit to known organohalide respirers such as Dehalococcoides, whereas no functionally known dehalogenation-related genes such as rdhA were found, indicating the need to improve the molecular approach to assess functional genes for organohalide respiration.

Enrichment, geo-accumulation and risk surveillance of toxic metals for different environmental compartments from Mehmood Booti dumping site, Lahore city, Pakistan.

PubMed

Aiman, Umme; Mahmood, Adeel; Waheed, Sidra; Malik, Riffat Naseem

2016-02-01

The present study was designed to probe the levels of heavy metals (Cd, Pb, Cr, Mn, Cu, Ni, Zn and Fe) for different environmental matrices (ground water, wastewater, sediment, soil, dust and leachates). Impact of solid waste dumping site on nearby human population has also been assessed. The results revealed that concentration of Pb, Fe, Cd, Mn and Cu surpassed the permissible limits of World Health Organization (WHO) and US Environmental Protection Agency (USEPA) in water, soil, sediments, while aforesaid metals in wastewater were above the National Environmental Quality Standards (NEQS). Our results for enrichment factor (EF) and geo-accumulation (I(geo)) values revealed that soils and sediments were contaminated with Cd, Pb, Ni and Mn. The Cd content caused a considerably high potential ecological risk (E(r)(i) ≥ 320) in soil and sediments. Pb and Cd caused high health risk (HR > 1) to local residents via dust and drinking water intake. Potential cancer risk for Pb was higher than USEPA standard values (1.0E-06-1.0E-04) through water intake. The Mehmood Booti dumping site is a potential source of toxic pollutants contamination to the surrounding population. It is recommended to take proper actions for its management to resolve this issue. Copyright © 2015 Elsevier Ltd. All rights reserved.

Holocene deposits in the Mangyshlak Peninsula, North Caspian Sea region

NASA Astrophysics Data System (ADS)

Bezrodnykh, Yu. P.; Deliya, S. V.; Romanyuk, B. F.; Fedorov, V. I.; Sorokin, V. M.; Luksha, V. L.

2014-07-01

Comprehensive analysis of the data of high-precision seismoacoustic profiling, drilling and sampling of deposits using seabed corers, biostratigraphic studies, and radiocarbon age data was performed for the first time for Mangyshlak sediments in several bottom sites of the North Caspian. It was found that the Mangyshlak sediments comprise numerous linearly stretched depressions of 5-10 m in depth (morphologically similar to modern substeppe ilmen areas in the Volga River delta), which are covered by the Novocaspian sedimentary cover, and river incisions (among them the largest Volga River valley). In addition, the Mangyshlak sediments comprise the deltaic alluvial fans of different sizes along the shelf zone of the North Caspian. Analysis of mollusks and biogenic remains indicates that accumulation of the Mangyshlak sediments occurred in freshwater and slightly salty water environments under various hydrodynamic and hydrochemical conditions. According to radiocarbon dating of organic matter, the Mangyshlak sediments formed during sea regression in the range of 10-8 ka (isotopic age) or 11.5-8.5 ka (calendar age). Several types of sediments are distinguished: clayey-carbonate sediments, enriched with organic matter up to the formation of sapropel and peat, accumulated at the lowest sea level; weakly calcareous silty-clayey silts, formed during the subsequent intense filling of paleodepressions with terrigenous material. The features of the mineral composition of sediments are as follows: polymineral composition of clayey material with a high proportion of hydromica and disordered mixed-layered formations, a high content of minerals of the epidote group, amphiboles, and other accessory minerals. All of this indicates a genetic relationship between the Mangyshlak sediments and the Volga terrigenous material.

Lignin geochemistry of a Late Quaternary sediment core from Lake Washington

NASA Astrophysics Data System (ADS)

Hedges, John I.; Ertel, John R.; Leopold, Estella B.

1982-10-01

Long-term lignin stability and paleovegetation patterns were investigated using CuO oxidation products of sediments from an 11 m core of Late Quaternary sediment collected from the mid-basin of Lake Washington, Washington State. Relatively constant yields of lignin-derived phenols (normalized to organic carbon) from the entire core indicate minimal in situ lignin degradation over the last 13,000 years. Compositional patterns within the phenolic suite and increased corresponding yields from baseextracted sediments indicate that sedimentary lignins are present predominantly as well preserved plant tissue fragments. Abundance patterns of vanillyl, syringyl, and cinnamyl phenols record four distinct sequences within the core characterized by: (a) high concentrations of gymnosperm wood in a basal horizon of glacial flour, 11-10 m; (b) an essentially pure mixture of nonwoody angiosperm tissues in late Pleistocene sediments, 10-8 m; (c) relatively high concentrations of angiosperm woods in the bottom half of a limnic peat sequence deposited approximately 10,000-7,000 years B.P., 8-4 m; and (d) a progressive enrichment in gymnosperm woods at the expense of angiosperm woods over the last 7,000 years in the upper limnic peat, 4-0 m. Vascular plant tissues account for less than half the total sedimentary organic carbon throughout the core.

Nitrogen cycling following The Great Oxidation Event, evidence from the Paleoproterozoic of Fennoscandia.

NASA Astrophysics Data System (ADS)

Junium, C. K.; Kump, L.; Arthur, M. A.; Melezhik, V.; Lepland, A.; Members of the FAR-DEEP Drilling Team

2011-12-01

The Fennoscandia Arctic Russia - Drilling Early Earth Project (FAR-DEEP) recovered core materials spanning the early Paleoproterozoic of Arctic Russia under the auspices of the International Continental Scientific Drilling Program. Here we present N and C isotopic data documenting N and C cycle dynamics during this critical interval of Earth history. Additionally, we will discuss the challenges of nitrogen isotope studies in such ancient sediments and the methods that we have utilized to test the fidelity of our nitrogen isotope data. Nitrogen isotope studies in very ancient sedimentary rocks, like those recovered by the FAR-DEEP are plagued by the concerns of diagenetic and metamorphic overprinting. Nitrogen is often present in very low concentrations and in a variety of inorganic phases that may or may not be derived from the ambient organic matter. For these reasons, bulk sediment δ15N data can be at best, ambiguous. To overcome these issues we have utilized kerogens for δ15N and δ13C analyses. The large difference between bulk and kerogen δ15N data demonstrates that inorganic N is anomalously 15N-enriched, by up to 7% and bulk δ15N values substantially overestimate the magnitude of the 15N variability in the Onega Basin (OB) sediments. Metasomatic processes during basinal magamatic activity resulted in the addition of 15N-enriched inorganic-N. Authigenic K-bearing micas are common in intervals where bulk δ15N values are 15N-enriched, suggesting that secondary mineral phases have retained 15N-enriched ammonia generated during metsomatism. The FAR-DEEP drilling team has documented an anomalously large, and rapid δ13C shift of -17% in carbonates and organic matter of the Zhaoneskaya Formation (ZF) of the OB following the extended period of 13Ccarb-enrichment know as the Lomagundi-Jatuli event. The isotopic shift in reduced carbon has also been recognized in the Franceville Formation of Gabon, termed here as "Shunga-Francevillian" anomaly, and may reflect the global oxidation of organic matter buried during the buildup of atmospheric oxygen in response to Lomagundi-Jatuli carbon burial. The dynamic response of the nitrogen cycle in the ZF is consistent with increased availability of O2 in the water column and is similar to the response documented in Archean sequences. Kerogen δ15N values are below 2%, most likely reflecting a biological N2-fixation source for nutrient-nitrogen with little influence from denitrification. δ13C values increase from -26% to -19% signaling a transient increase in the burial of organic carbon and net production of O2. Transition from a largely anoxic OB water column to one that was oxidized in its surface waters would have allowed for redox cycling of nitrogen and accompanying 15N-enrichment. Thus, the observed δ15N increase of 5% reflects an expansion in denitrification and associated reactions and oxidation of the OB water column under elevated atmospheric O2. At the end of the precipitous decrease in δ13C values δ15N values return pre-excursion values of ~+2%. This drop in δ13C and δ15N suggests a return to less oxidizing conditions in the OB following drawdown of atmospheric O2 during organic matter oxidation.

Nitrogen isotopes in lake sediments (Tiefer See, NE Germany) and their potential for paleoenvironmental and human impact reconstruction

NASA Astrophysics Data System (ADS)

Plessen, Birgit; Kienel, Ulrike; Dräger, Nadine; Brauer, Achim

2015-04-01

The light stable isotopes of nitrogen and carbon can be widely used to reconstruct past paleoenvironmental conditions, agricultural landscape development, and industrial pollution. They may reflect human impact by extensive land use, manure, sewage input, and atmospheric nitrogen compounds. To understand the lake nitrogen cycle depending on natural variability and anthropogenic forcing, we study the sediment record of Lake Tiefer See (Mecklenburg/NE-Germany) together with the recent input and productivity monthly monitored in sediment traps in the hypo-, meta- and epilimnion. The monitoring of the dimictic to monomictic Lake Tiefer See (62.5 m water depth) over the last three years clearly shows high δ15N (+7 to +14‰ ), and low δ113Corg (-28 to -33‰ ) values of the deposited matter mainly corresponding to internal organic productivity driven by nutrient loading and the development of anoxia in the hypolimnion. Compared to that, surface soil and terrestrial plant materials are characterised by lower δ15N (+3 to +6‰ ), and higher δ13Corg (-28 to -25‰ ) values. Recent high δ15N values of the phytoplankton in the lake water reflect assimilation of dissolved nitrogen compounds enriched in 15N, whereas the lower δ15N of surface core sedimentary matter indicate partly decomposition of organic matter in the anoxic zone and release of 15N enriched components into the lake water. We furthermore identified in the lake sedimentary record a continuous increase in δ15N from +3 to +8‰ over the last 400 years interrupted by short term phases of decreasing 15N enrichment implying an intrusion of human activity in the nitrogen cycle starting at ca. AD 1590. This study is a contribution to the Virtual Institute of Integrated Climate and Landscape Evolution Analysis -ICLEA- of the Helmholtz Association, grant number VH-VI-415.

Heavy metals pollution status in surface sediments (rivers and artifical lakes, Serbia)

NASA Astrophysics Data System (ADS)

Sakan, Sanja; Đorđević, Dragana

2017-04-01

Potentially hazardous trace elements, often in literature referred as "heavy metals", are deemed serious pollutants due to their toxicity, persistence and non-degradability in the environment. These elements play an important role in extent of water pollution and threaten the health of populations and ecosystems. As the sink of heavy metals, sediment beds adsorb metals in quantities that are many times higher than those found in the water column in the long-term polluted water environment. It is believed that most of the metal content, as much as 90% in aquatic sediments is bound to sediments. Metal contamination in these sediments could be directly affect the river water quality, resulting in potential consequences to the sensitive lowest levels of the food chain and ultimately to human health. The objective of this research was the evaluation of heavy metal contamination level in sediments of the most important rivers and artificial lakes in Serbia. The heavy metal enrichment in studied sediments was conducted by using: determination of total metal content, sequential extraction procedure for the fractionation of studied elements, quantification of the metal enrichment degree in the sediments by calculating geo-accumulation indices, determination of actual and potential element availability and application of BRAI index for the assessment of heavy metal bioavailability. The sediments were found to be contaminated by heavy metals to various extents, mostly with Cd, Cu, and Zn. The significant variation in heavy metal distribution among samples collected in this large region, encompassing all Serbian watersheds, suggests the selective contamination of sediments by heavy metals. Elevated concentrations of elements in most cases were detected in samples of river sediments, since artificial lake reservoirs are usually built in rural areas, where the less anthropogenic pollution. Rivers often flow through the towns and these water basins less or more loaded micronutrients, toxic substances, organic or inorganic, waste materials, depending on the species and type of industrial processes that are often without the necessary technological and mandatory treatment directly discharged into them. Due to the potential risk of heavy metal pollution in studied sediments, pollution prevention and control measurements seems necessary, especially in areas where we found increased levels of these elements.

Comparative geochemistry of Indian margin (Arabian Sea) sediments: Estuary to continental slope.

NASA Astrophysics Data System (ADS)

Cowie, Greg; Mowbray, Stephen; Kurian, Siby; Sarkar, Amit; White, Carol; Anderson, Amy; Vergnaud, Bianca; Johnstone, Gisele; Brear, Samuel; Woulds, Clare; Naqvi, Wajih; Kitazato, Hiroshi

2014-05-01

Factors controlling the distribution of organic matter in the Arabian Sea have been the subject of much research and debate ever since organic-rich slope deposits were associated with the mid-water oxygen minimum zone (OMZ) However, the debate remains open, and numerous interacting factors have been invoked as important controls. A limitation of most previous studies is that they have been restricted to limited portions of the margin, and have not included molecular-level tracers that allow distinction of organic matter (OM) source and degradation state as factors in OM distribution. We report results from sites across the Indian margin of the Arabian Sea, which were analysed for carbon and nitrogen compositions (elemental and isotopic), grain size and indices of OM source and degradation state. Site locations ranged from the Mandovi/Zuari estuaries to depths of ~2000m on the continental slope, thus spanning both the semi-permanent OMZ on the upper slope (~200-1300m) and the seasonal hypoxic zone that impinges on the shelf. Source indices showed mixed marine and terrigenous OM within the estuaries, but overwhelming predominance (80%+) of marine OM on the shelf and slope, even in nearshore deposits. Thus, riverine OM is heavily diluted or efficiently remineralised within or immediately offshore of the estuaries. Any terrigenous OM that is exported appears to be retained in nearshore muds; lignin phenols indicate that the small terrigenous OM content of slope sediments is of different origin, potentially from rivers to the north. Organic C contents of surface shelf and slope sediments varied from <0.5 wt% in relict shelf sands to a maximum of >7 wt% at upper slope sites within the OMZ, then decreasing to ≤1wt% at 2000m. However, major variability (~5 wt%) occured within the OMZ at sites with near-identical depths and bottom-water oxygen. A strong relationship between organic C and grain size was seen for OMZ sediments, but lower C loadings were found for sites on the shelf and below the OMZ. Diagenetic indices confirmed that lower C content below the OMZ is associated with greater extent of OM degradation, but that C-poor shelf sediments are not consistently more degraded than those within the OMZ. Together, results indicate that OM enrichment on the upper slope, where it occurs, can be explained by winnowing or other physical processes on the shelf combined with progressive OM degradation with increasing oxygen exposure below the OMZ. Reduced oxygen exposure may contribute to observed OM enrichment with the OMZ, but hydrodynamic processes are the overriding control on sediment OM distribution, even within the OMZ.

Stable Carbon Isotope Composition of Remineralizing Organic Matter in the Northern Gulf of Mexico Continental Shelf

NASA Astrophysics Data System (ADS)

Hu, X.; Wang, H.; Rabalais, N. N.

2016-02-01

Despite years of study, whether water column or benthic respiration controls oxygen consumption in the seasonally hypoxic Northern Gulf of Mexico (nGOM) waters remains contentious. Elucidating this control is essential for long-term nutrient management purposes. In this study, we examined stable carbon isotope composition (δ13C) of organic matter that was remineralized in subsurface water of the nGOM continental shelf using both shipboard incubations (water and sediment) and a three-endmember mixing model. Based on our 2014 data, sediment and water incubations yielded disparate δ13C signatures in the respiration produced CO2, with the sediment incubation generating substantially more 13C-enriched CO2 (-16 -21‰ in sediment vs. -27 -29‰ in water), though water column bulk particulate organic matter (POM) had δ13C ranging from -23‰ to -25‰. However, from the three-endmember mixing model, our calculated CO2-δ13C due to respiration in the entire surveyed nGOM shelf was -18.5‰. This value was consistent with the results obtained in previous annual shelfwide cruises (-17.2 -19.5‰). The close agreement between respirational CO2-δ13C from the mixing model and that from sediment incubation suggests that benthic process likely played a dominant role in subsurface respiration in the nGOM shelf. This result also indicates that hydrocarbon remineralization was likely insignificant on the ecosystem level after the 2010 Deepwater Horizon oil spill.

Diagnosis of potential stressors adversely affecting benthic ...

EPA Pesticide Factsheets

Greenwich Bay is an urbanized embayment of Narragansett Bay potentially impacted by multiple stressors. The present study identified the important stressors affecting Greenwich Bay benthic fauna. First, existing data and information were used to confirm that the waterbody was impaired. Second, the presence of source, stressor, and effect were established. Then linkages between source, stressor, and effect were developed. This allows identification of probable stressors adversely affecting the waterbody. Three pollutant categories were assessed: chemicals, nutrients, and suspended sediments. This weight of evidence approach indicated that Greenwich Bay was primarily impacted by eutrophication-related stressors. The sediments of Greenwich Bay were carbon enriched and low dissolved oxygen concentrations were commonly seen, especially in the western portions of Greenwich Bay. The benthic community was depauperate, as would be expected under oxygen stress. Although our analysis indicated that contaminant loads in Greenwich Bay were at concentrations where adverse effects might be expected, no toxicity was observed, as a result of high levels of organic carbon in these sediments reducing contaminant bioavailability. Our analysis also indicated that suspended sediment impacts were likely nonexistent for much of the Bay. This analysis demonstrates that the diagnostic procedure was useful to organize and assess the potential stressors impacting the ecological well-being

CROSS-INDUCTION OF PYRENE AND PHENANTHRENE IN MYCOBACTERIUM SP. ISOLATED FROM POLYCYCLIC AROMATIC HYDROCARBON CONTAMINATED RIVER SEDIMENTS

EPA Science Inventory

A polycyclic aromatic hydrocarbon (PAH)-degrading culture enriched from contaminated river sediments and a Mycobacterium sp. isolated from the enrichment were tested to investigate the possible synergistic and antagonistic interactions affecting the degradation of pyrene in the p...

Chemistry and mineralogy of pyrite-enriched sediments at a passive margin sulfide brine seep: abyssal Gulf of Mexico

USGS Publications Warehouse

Commeau, R.F.; Paull, C.K.; Commeau, J.A.; Poppe, L.J.

1987-01-01

Pyrite is rapidly accumulating at the contact between the Cretaceous limestones of the Florida Platform and the hemipelagic sediments of the abyssal Gulf of Mexico. Sediments sampled with the submersible "Alvin" in 3266 m of water are associated with a dense community of organisms that depend on chemosynthetic primary production as a food source. Analysis of the chemistry, mineralogy, and textural composition of these sediments indicate that iron sulfide mineralization is occurring at the seafloor within an anoxic micro-habitat sustained by the advection of hydrogen sulfide-charged saline brines from the adjacent platform. The chemosynthetic bacteria that directly overlie the sediments oxidize hydrogen sulfide for energy and provide elemental sulfur that reacts with iron monosulfide to form some of the pyrite. The sediments are mixtures of pyrite (??? 30 wt.%), BaSr sulfates (??? 4 wt.%), clays, and locally derived biogenic carbonates and are progressively being cemented by iron sulfides. Oxidation of hydrogen sulfide produces locally acidic conditions that corrode the adjacent limestones. Potential sources of S, H2S, Fe, Ba, and Sr are discussed. ?? 1987.

Enrichment of Fusobacteria in Sea Surface Oil Slicks from the Deepwater Horizon Oil Spill

PubMed Central

Gutierrez, Tony; Berry, David; Teske, Andreas; Aitken, Michael D.

2016-01-01

The Deepwater Horizon (DWH) oil spill led to rapid microbial community shifts in the Gulf of Mexico, including the formation of unprecedented quantities of marine oil snow (MOS) and of a massive subsurface oil plume. The major taxa that bloomed in sea surface oil slicks during the spill included Cycloclasticus, and to a lesser extent Halomonas, Alteromonas, and Pseudoalteromonas—organisms that grow and degrade oil hydrocarbons aerobically. Here, we show that sea surface oil slicks at DWH contained obligate and facultative anaerobic taxa, including members of the obligate anaerobic phylum Fusobacteria that are commonly found in marine sediment environments. Pyrosequencing analysis revealed that Fusobacteria were strongly selected for when sea surface oil slicks were allowed to develop anaerobically. These organisms have been found in oil-contaminated sediments in the Gulf of Mexico, in deep marine oil reservoirs, and other oil-contaminated sites, suggesting they have putative hydrocarbon-degrading qualities. The occurrence and strong selection for Fusobacteria in a lab-based incubation of a sea surface oil slick sample collected during the spill suggests that these organisms may have become enriched in anaerobic zones of suspended particulates, such as MOS. Whilst the formation and rapid sinking of MOS is recognised as an important mechanism by which a proportion of the Macondo oil had been transported to the sea floor, its role in potentially transporting microorganisms, including oil-degraders, from the upper reaches of the water column to the seafloor should be considered. The presence of Fusobacteria on the sea surface—a highly oxygenated environment—is intriguing, and may be explained by the vertical upsurge of oil that provided a carrier to transport these organisms from anaerobic/micro-aerophilic zones in the oil plume or seabed to the upper reaches of the water column. We also propose that the formation of rapidly-sinking MOS may have re-transported these, and other microbial taxa, to the sediment in the Gulf of Mexico. PMID:27681918

Geochemical, radiometric, and environmental approaches for the assessment of the intensity and chronology of metal contamination in the sediment cores from Oualidia lagoon (Morocco).

PubMed

Mejjad, Nezha; Laissaoui, Abdelmourhit; El-Hammoumi, Ouafa; Fekri, Ahmed; Amsil, Hamid; El-Yahyaoui, Adil; Benkdad, Azzouz

2018-06-01

The present study evaluates the distribution of metals over the last 100 years in the Oualidia lagoon by examining their concentrations in the sediment cores. The samples were analyzed by instrumental neutron activation analysis and inductively coupled plasma mass spectrometry. Activities of 210 Pb, 226 Ra, and 137 Cs were determined by gamma-ray spectrometry for establishing the age-depth relationships throughout the sediment cores by applying conventional models. The results indicated that the study area is contaminated by As and Cd revealing a detectable anthropogenic input of occurring metals as a consequence of the continuous development of human activities around the lagoon since 1950. The enrichment factor calculated for each layer of the three cores revealed that the studied sediments present no enrichment by Pb, K, and Mn; minor enrichment by Zn, Cr, Co, Cu, V, and Ni; and a moderately to severe enrichment by As and Cd. The pollution load index values increase from the bottom to the top of cores, and ranged from 0.9 to 2.8, which indicates levels of pollutants ranging from background to relatively high concentrations in the investigated sediments.

Agricultural and urban pollution

NASA Technical Reports Server (NTRS)

Brehmer, M. L.

1972-01-01

The degradation produced by the introduction of agricultural and urban wastes into estuarine systems, with emphasis on the Chesapeake Bay area, is discussed. The subjects presented are: (1) effects of sediment loading and (2) organic and nutrient loading problems. The impact of high turbidity on the biological life of the bay is analyzed. The sources of nutrients which produce over-enrichment of the waters and the subsequent production of phytoplankton are examined.

Isolation of Geobacter species from diverse sedimentary environments

USGS Publications Warehouse

Coaxes, J.D.; Phillips, E.J.P.; Lonergan, D.J.; Jenter, H.; Lovley, D.R.

1996-01-01

In an attempt to better understand the microorganisms responsible for Fe(III) reduction in sedimentary environments, Fe(III)-reducing microorganisms were enriched for and isolated from freshwater aquatic sediments, a pristine deep aquifer, and a petroleum-contaminated shallow aquifer. Enrichments were initiated with acetate or toluene as the electron donor and Fe(III) as the electron acceptor. Isolations were made with acetate or benzoate. Five new strains which could obtain energy for growth by dissimilatory Fe(III) reduction were isolated. All five isolates are gram- negative strict anaerobes which grow with acetate as the electron donor and Fe(III) as the electron acceptor. Analysis of the 16S rRNA sequence of the isolated organisms demonstrated that they all belonged to the genus Geobacter in the delta subdivision of the Proteobacteria. Unlike the type strain, Geobacter metallireducens, three of the five isolates could use H2 as an electron donor fur Fe(III) reduction. The deep subsurface isolate is the first Fe(III) reducer shown to completely oxidize lactate to carbon dioxide, while one of the freshwater sediment isolates is only the second Fe(III) reducer known that can oxidize toluene. The isolation of these organisms demonstrates that Geobacter species are widely distributed in a diversity of sedimentary environments in which Fe(III) reduction is an important process.

Occurrence and distribution of contaminants in bottom sediment and water of the Barron River Canal, Big Cypress National Preserve, Florida

USGS Publications Warehouse

Miller, Ronald L.; McPherson, Benjamin F.

2001-01-01

Trace elements and organic contaminants in bottom-sediment samples collected from 10 sites on the Barron River Canal and from one site on the Turner River in October 1998 had patterns of distribution that indicated different sources. At some sites on the Barron River Canal, lead, copper, and zinc, normalized to aluminum, exceeded limits normally considered as background and may be enriched by human activities. Polynuclear aromatic hydrocarbons and p-cresol, normalized against organic carbon, had patterns of distribution that indicated local sources of input from a road or vehicular traffic or from an old creosote wood treatment facility. Phthalate esters and the traces elements arsenic, cadmium, and zinc were more widely distributed with the highest normalized concentrations occurring at the Turner River background site, probably due to the high percentage of fine sediment (74% less than 63 micrometers) and high organic carbon concentration (42%) at that site and the binding effect of organic carbon on trace elements and trace organic compounds. Low concentrations of pesticides or pesticide degradation products were detected in bottom sediment (DDD and DDE, each less than 3.5 µg/kg) and water (9 pesticides, each less than 0.06 µ/L), primarily in the northern reach of the Barron River Canal where agriculture is a likely source. Although a few contaminants approached criteria that would indicate adverse effects on aquatic life, none exceeded the criteria, but the potential synergistic effects of mixtures of contaminants found at most sites are not included in the criteria.

Environmental effects of dredging on sediment nutrients, carbon and granulometry in a tropical estuary.

PubMed

Nayar, S; Miller, D J; Hunt, A; Goh, B P L; Chou, L M

2007-04-01

This monitoring study encompassed a period prior to dredging, during dredging and post dredging between July 1999 to June 2000 in Ponggol estuary located along the northeastern coast of Singapore. Mean concentrations of sediment nutrients in mg x Kg(-1) (+/- standard error of means) prior to dredging, during dredging and post dredging were 9.75 +/- 4.24, 8.18 +/- 4.29 and 11.46 +/- 4.74 for ammonium, 0.08 +/- 0.05, 0.06 +/- 0.02 and 0.09 +/- 0.01 for nitrite, 0.04 +/- 0.04, 0.11 +/- 0.17 and 0.25 +/- 0.30 for nitrate, 4.83 +/- 3.48, 0.77 +/- 0.48 and 8.33 +/- 9.73 for phosphate respectively. Pre dredge, dredge and post dredge levels of total carbon (TC) were 18.5 +/- 3.7, 20.2 +/- 3.5 and 34.6 +/- 12.0, of total organic carbon (TOC) were 10.5 +/- 2.9, 19.5 +/- 3.6 and 34.6 +/- 12.0 and of total inorganic carbon (TIC) were 7.9 +/- 1.0, 0.7 +/- 0.4 and non detectable in the sediments, respectively. Both, sediment nutrients and carbon registered lower concentrations with onset of dredging, with the exception of nitrate and TOC. A shift in sedimentary carbon from inorganic carbon to organic carbon was also observed with the onset of the dredging activities when the organically enriched historically contaminated layer was exposed. Sediment granulometry showed that the sediments in the estuary were predominantly silt and clay prior to dredging, which changed to sand with onset of dredging. Silt load in the sediments was highest post-dredge. Sediment nutrients and sediment organic carbon were observed to associate with the finer fractions (silt and clay) of sediments. Finer fractions of sediments get resuspended during a dredging event and are dispersed spatially as the result of tides and water movements. Prior to this study, the potential for nutrient release and sediment granulometry due to dredging have been suggested, but there have been few studies of it, especially in the tropics. The baseline information gathered from this study could be used to work out effective management strategies to protect similar tropical ecosystems elsewhere, should there be no other alternative to dredging.

Impacts of milkfish (Chanos chanos) aquaculture on carbon and nutrient fluxes in the Bolinao area, Philippines.

PubMed

Holmer, Marianne; Marbá, Núria; Terrados, Jorge; Duarte, Carlos M; Fortes, Mike D

2002-07-01

Sediment oxygen consumption, TCO2 production and nutrient fluxes across the sediment-water interface were measured in sediments within and along a transect from four fish pens with production of milkfish (Chanos chanos) in the Bolinao area, The Philippines. The four fish pens were each representing a specific period in the production cycling. There was a positive linear relationship between the rates of sedimentation inside the fish pens and the sediment oxygen consumption indicating that the benthic processes were controlled by the input of organic matter from fish production. The nutrient fluxes were generally higher inside the fish pens, and nitrate was taken up (1.7-5.8 mmol m(-2) d(-1)) whereas ammonium (1-22 mmol m(-2) d(-1)) and phosphate (0.2-4.7 mmol m(-2) d(-1)) were released from the sediments. The sediments were enriched in organic matter with up to a factor 4 compared to outside. A mass balance for one crop of milkfish was constructed based on production data and on measured fluxes of nutrients in the fish pens to assess the loss of carbon and nutrients to the environment. There was a loss to the surroundings of carbon and nitrogen of 51-68% of the total input, whereas phosphorus was buried in the sediments inside the fish pens which acted as net sinks of phosphorus. The results obtained suggest that fish pen culture as practiced in the Bolinao area, leads to even greater impacts on benthic carbon and nutrient cycling than those found in suspended cage cultures.

Anaerobic Degradation of Chloroaromatic Compounds in Aquatic Sediments under a Variety of Enrichment Conditions †

PubMed Central

Genthner, Barbara R. Sharak; Price, W. Allen; Pritchard, P. H.

1989-01-01

Anaerobic degradation of monochlorophenols and monochlorobenzoates in a variety of aquatic sediments was compared under four enrichment conditions. A broader range of compounds was degraded in enrichments inoculated with sediment exposed to industrial effluents. Degradation of chloroaromatic compounds was observed most often in methanogenic enrichments and in enrichments amended with 1 mM bromoethane sulfonic acid. Degradation was observed least often in enrichments with added nitrate or sulfate. The presence of 10 mM bromoethane sulfonic acid prevented or inhibited degradation of most compounds tested. Primary enrichments in which KNO3 was periodically replenished to maintain enrichment characteristics degraded chlorobenzoates, but not chlorophenols. In contrast, primary enrichments in which Na2SO4 was periodically replenished failed to degrade any chloroaromatic compounds. Upon transfer to fresh medium, none of the sulfate enrichments required the presence of Na2SO4 for degradation, while only two nitrate enrichments required the presence of KNO3 for degradation. As a class of compounds, chlorophenols were degraded more readily than chlorobenzoates. However, as individual compounds 3-chlorobenzoate, 2-chlorophenol, and 3-chlorophenol degradation was observed most often and with an equal frequency. Within the chlorophenol class, the relative order of degradability was ortho > meta > para, while that of chlorobenzoates was meta > ortho > para, In laboratory transfers, 2-chlorobenzoate, 3-chlorobenzoate, and 2-chlorophenol degradation was most easily maintained, while degradation of para-chlorinated compounds was very difficult to maintain. PMID:16347940

Trace element fluxes during the last 100 years in sediment near a nuclear power plant

NASA Astrophysics Data System (ADS)

Bojórquez-Sánchez, S.; Marmolejo-Rodríguez, A. J.; Ruiz-Fernández, A. C.; Sánchez-González, A.; Sánchez-Cabeza, J. A.; Bojórquez-Leyva, H.; Pérez-Bernal, L. H.

2017-11-01

The Salada coastal lagoon is located in Veracruz (Mexico) near the Laguna Verde Nuclear Power Plant (LVNPP). Currently, the lagoon receives the cooling waters used in the LVNPP. To evaluate the fluxes and mobilization of trace elements due to human activities in the area, two sediment cores from the coastal flood plains of Salada Lagoon were analysed. Cores were collected using PVC tubes. Sediments cores were analysed every centimetre for dating (210Pb by alpha detector) and trace metal analysis using ICP-Mass Spectrometry. The dating of both sediment cores covers the period from 1900 to 2013, which includes the construction of the LVNPP (1970's). The Normalized Enrichment Factor shows enrichment of Ag, As and Cr in both sediment cores. These enrichments correspond to the extent of mining activity (which reached a maximum in the 1900's) and to the geological setting of the coastal zone. The profiles of the element fluxes in both sediment cores reflected the construction and operation of the LVNPP; however, the elements content did not show evidence of pollution coming from the LVNPP.

Influence of urban runoff, inappropriate waste disposal practices and World War II on the heavy metal status of sediments in the southern half of Saipan Lagoon, Saipan, CNMI.

PubMed

Denton, Gary R W; Emborski, Carmen A; Habana, Nathan C; Starmer, John A

2014-04-15

Heavy metals were examined in sediments from the southern half of Saipan Lagoon. These waters provided tactical access for US troops during WWII and were heavily shelled at the time. Mercury profiles in sediments were, to some extent, reflective of this event. Samples from the southern end of the lagoon, where an old post-war dumpsite once existed, were found to be substantially enriched with Pb, Cu and Zn. Further north, the lagoon was primarily impacted by urban runoff. Metal enrichment in sediments from this region was generally highest at storm drain outlets and attenuated seawards. Moderate enrichment was rarely exceeded for any element other than Hg beyond the 50 m mark. Sediment quality guidelines used to flag potentially adverse ecological health effects revealed no PEL exceedances. TEL exceedances for Pb and Cu were identified in sediments near the former dumpsite. The public health implications of the data are briefly addressed. Copyright © 2014 Elsevier Ltd. All rights reserved.

Nickel and its isotopes in organic-rich sediments: implications for oceanic budgets and a potential record of ancient seawater

NASA Astrophysics Data System (ADS)

Ciscato, Emily R.; Bontognali, Tomaso R. R.; Vance, Derek

2018-07-01

Nickel (Ni) is a biologically active element that displays a nutrient-like depth distribution in the modern oceans. Recent studies of Ni isotopes have highlighted the fact that, in common with many other transition metals, the Ni stable isotope composition, expressed as δ60Ni, of the dissolved phase is heavier than the inputs, at +1.3 to +1.7‰. The sedimentary outputs that control the high δ60Ni of the ocean, coupled with records for past seawater, could potentially yield new information on the past Earth system, but these are currently not well understood. Here we present the first Ni abundance and isotope data for a key output, that associated with Ni uptake into organic matter, at productive upwelling regions and elsewhere. We investigate the distribution of Ni and its isotopes in two fractions separated from the bulk sediment, an HF-digestible fraction, extracted with HF-HCl, and an organic-sulphide-rich fraction. The organic-sulphide fractions exhibit a range in δ60Ni, from +0.86 to +1.83. Systematic relationships between Ni concentrations, total organic carbon and Ni isotopes suggest that the organic-sulphide fraction originates in the photic zone, and is delivered to the sediment as a closed system, despite the possibility of transfer of Ni to sulphide within it. Authigenic Ni in the bulk sediment is dominated by the HF-digestible fraction which, in Ni-enriched sediments where the detrital correction is small, is very close to the modern deep ocean, at δ60Ni = +1.2‰. These data suggest that organic-rich sediments beneath upwelling zones, while they are an important output flux of Ni from the oceans, do not solve the isotope balance problem because their δ60Ni is almost identical to modern seawater. On the other hand, the approach adopted here involving the analysis of the two fractions, both traces the fractionation imparted by biological uptake as well as recording the δ60Ni of contemporary seawater, suggesting potential for understanding the past oceans.

Fe-phyllosilicate redox cycling organisms from a redox transition zone in Hanford 300 Area sediments.

PubMed

Benzine, Jason; Shelobolina, Evgenya; Xiong, Mai Yia; Kennedy, David W; McKinley, James P; Lin, Xueju; Roden, Eric E

2013-01-01

Microorganisms capable of reducing or oxidizing structural iron (Fe) in Fe-bearing phyllosilicate minerals were enriched and isolated from a subsurface redox transition zone at the Hanford 300 Area site in eastern Washington, USA. Both conventional and in situ "i-chip" enrichment strategies were employed. One Fe(III)-reducing Geobacter (G. bremensis strain R1, Deltaproteobacteria) and six Fe(II) phyllosilicate-oxidizing isolates from the Alphaproteobacteria (Bradyrhizobium japonicum strains 22, is5, and in8p8), Betaproteobacteria (Cupriavidus necator strain A5-1, Dechloromonas agitata strain is5), and Actinobacteria (Nocardioides sp. strain in31) were recovered. The G. bremensis isolate grew by oxidizing acetate with the oxidized form of NAu-2 smectite as the electron acceptor. The Fe(II)-oxidizers grew by oxidation of chemically reduced smectite as the energy source with nitrate as the electron acceptor. The Bradyrhizobium isolates could also carry out aerobic oxidation of biotite. This is the first report of the recovery of a Fe(II)-oxidizing Nocardioides, and to date only one other Fe(II)-oxidizing Bradyrhizobium is known. The 16S rRNA gene sequences of the isolates were similar to ones found in clone libraries from Hanford 300 sediments and groundwater, suggesting that such organisms may be present and active in situ. Whole genome sequencing of the isolates is underway, the results of which will enable comparative genomic analysis of mechanisms of extracellular phyllosilicate Fe redox metabolism, and facilitate development of techniques to detect the presence and expression of genes associated with microbial phyllosilicate Fe redox cycling in sediments.

Fe-phyllosilicate redox cycling organisms from a redox transition zone in Hanford 300 Area sediments

PubMed Central

Benzine, Jason; Xiong, Mai Yia; Kennedy, David W.; McKinley, James P.; Lin, Xueju; Roden, Eric E.

2013-01-01

Microorganisms capable of reducing or oxidizing structural iron (Fe) in Fe-bearing phyllosilicate minerals were enriched and isolated from a subsurface redox transition zone at the Hanford 300 Area site in eastern Washington, USA. Both conventional and in situ “i-chip” enrichment strategies were employed. One Fe(III)-reducing Geobacter (G. bremensis strain R1, Deltaproteobacteria) and six Fe(II) phyllosilicate-oxidizing isolates from the Alphaproteobacteria (Bradyrhizobium japonicum strains 22, is5, and in8p8), Betaproteobacteria (Cupriavidus necator strain A5-1, Dechloromonas agitata strain is5), and Actinobacteria (Nocardioides sp. strain in31) were recovered. The G. bremensis isolate grew by oxidizing acetate with the oxidized form of NAu-2 smectite as the electron acceptor. The Fe(II)-oxidizers grew by oxidation of chemically reduced smectite as the energy source with nitrate as the electron acceptor. The Bradyrhizobium isolates could also carry out aerobic oxidation of biotite. This is the first report of the recovery of a Fe(II)-oxidizing Nocardioides, and to date only one other Fe(II)-oxidizing Bradyrhizobium is known. The 16S rRNA gene sequences of the isolates were similar to ones found in clone libraries from Hanford 300 sediments and groundwater, suggesting that such organisms may be present and active in situ. Whole genome sequencing of the isolates is underway, the results of which will enable comparative genomic analysis of mechanisms of extracellular phyllosilicate Fe redox metabolism, and facilitate development of techniques to detect the presence and expression of genes associated with microbial phyllosilicate Fe redox cycling in sediments. PMID:24379809

Stream-sediment geochemistry in mining-impacted streams : sediment mobilized by floods in the Coeur d'Alene-Spokane River system, Idaho and Washington

USGS Publications Warehouse

Box, Stephen E.; Bookstrom, Arthur A.; Ikramuddin, Mohammed

2005-01-01

Environmental problems associated with the dispersion of metal-enriched sediment into the Coeur d'Alene-Spokane River system downstream from the Coeur d'Alene Mining District in northern Idaho have been a cause of litigation since 1903, 18 years after the initiation of mining for lead, zinc, and silver. Although direct dumping of waste materials into the river by active mining operations stopped in 1968, metal-enriched sediment continues to be mobilized during times of high runoff and deposited on valley flood plains and in Coeur d'Alene Lake (Horowitz and others, 1993). To gauge the geographic and temporal variations in the metal contents of flood sediment and to provide constraints on the sources and processes responsible for those variations, we collected samples of suspended sediment and overbank deposits during and after four high-flow events in 1995, 1996, and 1997 in the Coeur d'Alene-Spokane River system with estimated recurrence intervals ranging from 2 to 100 years. Suspended sediment enriched in lead, zinc, silver, antimony, arsenic, cadmium, and copper was detected over a distance of more than 130 mi (the downstream extent of sampling) downstream of the mining district. Strong correlations of all these elements in suspended sediment with each other and with iron and manganese are apparent when samples are grouped by reach (tributaries to the South Fork of the Coeur d'Alene River, the South Fork of the Coeur d'Alene River, the main stem of the Coeur d'Alene River, and the Spokane River). Elemental correlations with iron and manganese, along with observations by scanning electron microscopy, indicate that most of the trace metals are associated with Fe and Mn oxyhydroxide compounds. Changes in elemental correlations by reach suggest that the sources of metal-enriched sediment change along the length of the drainage. Metal contents of suspended sediment generally increase through the mining district along the South Fork of the Coeur d'Alene River, decrease below the confluence of the North and South Forks, and then increase again downstream of the gradient flattening below Cataldo. Metal contents of suspended sediment in the Spokane River below Coeur d'Alene Lake were comparable to those of suspended sediment in the main stem of the Coeur d'Alene River above the lake during the 1997 spring runoff, but with somewhat higher Zn contents. Daily suspended-sediment loads were about 100 times larger in the 1996 flood (50-100-year recurrence interval) than in the smaller 1997 floods (2-5-year recurrence intervals). Significant differences in metal ratios and contents are also apparent between the two flood types. The predominant source of suspended sediment in the larger 1996 flood was previously deposited, metal-enriched flood-plain sediment, identified by its Zn/Pb ratio less than 1. Suspended sediment in the smaller 1997 floods had metal ratios distinct from those of the flood-plain deposits and was primarily derived from metal-enriched sediment stored within the stream channel, identified by a Zn/Pb ratio greater than 1. Sediment deposited during overbank flooding on the immediate streambank or natural levee of the river typically consists of sandy material with metal ratios and contents similar to those of the sandy streambed sediment in the adjacent river reach. Samples of overbank deposits in backlevee marshes collected after the 1996 flood have metal ratios similar to those of peak-flow suspended sediment in the same river reach, but generally lower metal contents.

Spatial distribution and potential biological risk of some metals in relation to granulometric content in core sediments from Chilika Lake, India.

PubMed

Barik, Saroja K; Muduli, Pradipta R; Mohanty, Bita; Rath, Prasanta; Samanta, Srikanta

2018-01-01

The article presents first systematic report on the concentration of selected major elements [iron (Fe) and manganese (Mn)] and minor elements [zinc (Zn), copper (Cu), chromium (Cr), lead (Pb), nickel (Ni), and cobalt (Co)] from the core sediment of Chilika Lake, India. The analyzed samples revealed higher content of Pb than the background levels in the entire study area. The extent of contamination from minor and major elements is expressed by assessing (i) the metal enrichments in the sediment through the calculations of anthropogenic factor (AF), pollution load index (PLI), Enrichment factor (EF), and geoaccumulation index (Igeo) and (ii) potential biological risks by the use of sediment quality guidelines like effect range median (ERM) and effect range low (ERL) benchmarks. The estimated indices indicated that sediment is enriched with Pb, Ni, Cr, Cu and Co. The enrichment of these elements seems to be due to the fine granulometric characteristics of the sediment with Fe and Mn oxyhydroxides being the main metal carriers and fishing boats using low grade paints, fuel, and fishing technology using lead beads fixed to fishing nets. Trace element input to the Chilika lake needs to be monitored with due emphasis on Cr and Pb contaminations since the ERM and ERL benchmarks indicated potential biological risk with these metals.

Influence of AOM on iron-sulfur-carbon systematics in marine sediment: A study from Krishna-Godavari basin, Bay of Bengal

NASA Astrophysics Data System (ADS)

Carvalho, M. A.

2017-12-01

Sedimentary diagenetic processes play key role in global sulfur-iron-carbon cycle. Microbially driven organoclastic sulfate reduction and anaerobic oxidation of methane (AOM) pathways are responsible for sulfate reduction in marine sediments. Concomitant H2S production and iron sulfide precipitation lead to Fe-sulfide burial in the sediments. Intra/intermolecular organic bound sulfur is also another major sink of global sulfur burial. In the present study, we have investigated the sulfidisation process in a core from Krishna-Godavari (K-G) basin, Bay of Bengal. K-G basin is well known for gas hydrate deposits and methane enrichment within 100-120 mbsf. Previous work from K-G basin has shown tell-tale evidence of paleo episodic- methane expulsion events and formation of authigenic carbonate crust at or above the sea floor1. Our study was carried out on a core MD-161-15 (water depth of 983 m and Lat. =16° 00.5700' N;Long. = 82° 03.4502' E) recovered on board R/V Marion Dufrense). The pyrite content in the core (measured as chromium reducible sulfur: CRS) range from 0.003 to 1.1 wt%. The reactive content (FeTR = FeOx + FeD + FeCRS) range from 0.9 to 3.5 wt%, where FeOX, FeD and FeCRS represents oxalate extractable (magnetite), buffered dithionite extractable (ferrihydrite, lepidocrocite, goethite, hematite) and boiling CrCl2 (in 6N HCl) extractable (Pyrite: FeS2) iron respectively. The δ34SCRS range from -49 to +16.7 ‰ VCDT and show good positive correlation with FeTR. Presence of highly 13C depleted authigenic carbonate in the sediments within 1600-3000 mbsf indicate influence of AOM and possible methane seepage2. The δ34SCRS profile show marked 34S depletion trend within the top 1012 mbsf. Below this depth, δ34SCRS values show steadily increasing trend superimposed by zones of sharp enrichment/ depletion of 34S. The 34S enrichment trend may attributed to late diagenetic pyritization from 34S enriched H2S produced from residual pore water sulfate via AOM pathway.

Export Mechanisms of Persistent Toxic Substances (PTSs) in Urban Land Uses during Rainfall-Runoff Events: Experimental and Modeling Studies

NASA Astrophysics Data System (ADS)

Zheng, Y.; Luo, X.; Lin, Z.

2016-12-01

The urban environment has a variety of Persistent Toxic Substances (PTS), such as Polycyclic Aromatic Hydrocarbons (PAHs) and mercury. Soil in pervious lands and dust deposited on impervious surfaces are two major sinks of PTSs in urbanized areas, which could contribute significant nonpoint source loadings of PTSs to adjacent waterbodies during rainfall-runoff events and therefore jeopardize aquatic ecosystems. However, PTSs have been much less understood regarding their export mechanisms in urban land uses, and efforts to model nonpoint source pollution processes of PTSs have been rare. We designed and performed in-lab rainfall-runoff simulation experiments to investigate transport of PAHs and mercury by runoff from urban soils. Organic petrology analysis (OPA) techniques were introduced to analyze the soil and sediment compositions. Our study revealed the limitation of the classic enrichment theory which attributes enrichment of pollutants in eroded sediment solely to the sediment's particle size distribution and adopts simple relationships between enrichment ratio and sediment flux. We found that carbonaceous materials (CMs) in soil are the direct and major sorbents for PAHs and mercury, and highly different in content, mobility and adsorption capacity for the PTSs. Anthropogenic CMs like black carbon components largely control the transport of soil PAHs, while humic substances have a dominant influence on the transport of soil mercury. A model was further developed to estimate the enrichment ratio of PAHs, which innovatively applies the fugacity concept.We also conducted field studies on export of PAHs by runoff from urban roads. A variable time-step model was developed to simulate the continuous cycles of PAH buildup and washoff on urban roads. The dependence of the pollution level on antecedent weather conditions was investigated and embodied in the model. The applicability of this approach and its value to environmental management was demonstrated by a case study in Beijing, China. Overall, our studies advanced the understanding of nonpoint source pollution of PTSs in the urban environment. The quantitative approaches developed can help improve existing nonpoint source pollution models. The study results also have important implications to watershed water quality management.

Functional evaluation of pollutant transformation in sediment from combined sewer system.

PubMed

Shi, Xuan; Ngo, Huu Hao; Sang, Langtao; Jin, Pengkang; Wang, Xiaochang C; Wang, Guanghua

2018-07-01

In this study, a pilot combined sewer system was constructed to characterize the pollutant transformation in sewer sediment. The results showed that particulate contaminants deposited from sewage could be transformed into dissolved matter by distinct pollutant transformation pathways. Although the oxidation-reduction potential (ORP) was varied from -80 mV to -340 mV in different region of the sediment, the fermentation was the dominant process in all regions of the sediment, which induced hydrolysis and decomposition of particulate contaminants. As a result, the accumulation of dissolved organic matter and the variation of ORP values along the sediment depth led to the depth-dependent reproduction characteristics of methanogens and sulfate-reducing bacteria, which were existed in the middle and deep layer of the sediment respectively. However, the diversity of nitrifying and polyphosphate-accumulating bacteria was low in sewer sediment and those microbial communities showed a non-significant correlation with nitrogen and phosphorus contaminants, which indicated that the enrichment of nitrogen and phosphorus contaminants was mainly caused by physical deposition process. Thus, this study proposed a promising pathway to evaluate pollutant transformation and can help provide theoretical foundation for urban sewer improvement. Copyright © 2018 Elsevier Ltd. All rights reserved.

Underestimated effects of sediments on enhanced startup performance of biofilm systems for polluted source water pretreatment.

PubMed

Lv, Zheng-Hui; Wang, Jing; Yang, Guang-Feng; Feng, Li-Juan; Mu, Jun; Zhu, Liang; Xu, Xiang-Yang

2018-02-01

In order to evaluate the enhancement mechanisms of enhanced startup performance in biofilm systems for polluted source water pretreatment, three lab-scale reactors with elastic stereo media (ESM) were operated under different enhanced sediment and hydraulic agitation conditions. It is interesting to found the previously underestimated or overlooked effects of sediment on the enhancement of pollutants removal performance and enrichment of functional bacteria in biofilm systems. The maximum NH 4 + -N removal rate of 0.35 mg L -1 h -1 in sediment enhanced condition was 2.19 times of that in control reactor. Sediment contributed to 42.0-56.5% of NH 4 + -N removal and 15.4-41.2% of total nitrogen removal in different reactors under different operation conditions. The enhanced hydraulic agitation with sediment further improved the operation performance and accumulation of functional bacteria. Generally, Proteobacteria (48.9-52.1%), Bacteroidetes (18.9-20.8%) and Actinobacteria (15.7-18.5%) were dominant in both sediment and ESM bioiflm at  phylum level. The potentially functional bacteria found in sediment and ESM biofilm samples with some functional bacteria mainly presented in sediment samples only (e.g., Genera Bacillus and Lactococcus of Firmicutes phylum) may commonly contribute to the removal of nitrogen and organics.

Environmental Impacts Of Zirab Coal Washing Plant, Mazandaran, Iran

NASA Astrophysics Data System (ADS)

Moore, F.; Esmaeili, A.

2009-04-01

Extraction and beneficiation operations associated with coal mining increase the rate of chemical reaction of waste material to air and water media. Zirab coal washing plant is located on the bank of the Cherat stream in Mazandaran province, Iran. coal Mined from central Alborz coalfield mines is not suitable for use in Iranian Steel Corporation. Hence, coal ash content is reduced by physical and chemical processes in this plant. These processes leave a large quantity of liquid and solid wastes that accumulate in waste dump and tailing dam. sediment and water samples taken from Sheshrudbar and Cherat streams and also from Talar river show high concentration of Cd, Mo and As in water samples of coal washing plant and the associated drainage. Eh-pH diagrams revealed the chemical species of elements in water. The enrichment factor and geoaccumulation index show that Cd, Hg, Mo and V are enriched in bottom sediments of the coal washing plant and decrease with increasing distance from the plant. Sequential extraction analysis Results of three sediment samples of Cherat stream show that silicate bound is the major phase in samples taken before and after the plant, but adjacent to the plant, organic bound is dominant. The high concentration of Cd and Mo in the water soluble phase, is noticeable and may result in high mobility and bioavailability of these elements. Mann-Whitney and Wilcoxon tests on six samples, before and after the coal washing plant support the obtained results. Keywords: Zirab; coal washing plant; Sequential extraction analysis; Mann-whitney; Wilcoxon; Enrichment factor; Geoaccumulation index.

Manganese carbonates in the Upper Jurassic Georgiev Formation of the Western Siberian marine basin

NASA Astrophysics Data System (ADS)

Eder, Vika G.; Föllmi, Karl B.; Zanin, Yuri N.; Zamirailova, Albina G.

2018-01-01

Manganese (Mn) carbonate rocks are a common lithological constituent of the Upper Oxfordian to Lower Tithonian (Volgian) Georgiev Formation of the Western Siberian marine basin (WSMB). The Mn carbonates in the Georgiev Formation are present in the form of massive sediments, stromatolites, and oncolites, and are associated with glauconite and partly also phosphate-rich clay- and siltstones. Unlike most Mn carbonates, they are not directly associated with organic-rich sediments, but occur below an organic-rich succession (Bazhenov Formation). The Mn carbonate occurrences can be traced from the western central area of the WSMB to its center along a distance of at least 750 km. The thickness of the Mn carbonates and their Mn contents becomes reduced in an eastward direction, related to increased detrital input. The geochemical and mineralogical heterogeneity within the Mn carbonates indicates that they were deposited stepwise in a diagenetic regime characterized by steep gradients in Mn, Ca, and Mg. A first step consisted in the replacement of initial sediments within the microbialites during an early diagenetic stage, followed by a second step where massive sediments were transformed into Mn carbonate. During both steps, the decomposition of organic matter was an important source of the newly formed carbonate. During a further step, voids were cemented by Mn carbonates, which are rich in pyrite. This last generation may only have formed once the organic-rich sediments of the overlying Bazhenov Formation were deposited. Accumulation of the Mn carbonates in the Upper Jurassic WSMB was controlled by the proximity of Mn-enriched parent rocks, likely in the Ural, which were subjected to intense geochemical weathering during the Late Jurassic.

Dichloromethane Fermentation by a Dehalobacter sp. in an Enrichment Culture Derived from Pristine River Sediment

PubMed Central

Justicia-Leon, Shandra D.; Ritalahti, Kirsti M.; Mack, E. Erin

2012-01-01

Dichloromethane (DCM) as the sole substrate supported growth of a Dehalobacter sp. in an enrichment culture derived from noncontaminated river sediment. DCM was not reductively dechlorinated, and acetate was produced, indicating DCM fermentation and further suggesting Dehalobacter growth is not limited to organohalide respiration. PMID:22179245

Tracers and constituents indicating the nature of organic fluxes, their origin and the effect of environmental conditions

NASA Astrophysics Data System (ADS)

Gadel, F.; Puigbó, A.; Alcan˜iz, J. M.; Charrière, B.; Serve, L.

1990-09-01

The nature of particulate organic matter was studied in suspended material sampled by bottles, particles collected by sediment traps and deposits from deltaic and open sea ecosystems of the northwestern Mediterranean. Elemental analyses were combined with pyrolysis-gas chromatography-mass spectrometry and with analysis of individual compounds such as phenols separated by high-performance liquid chromatography. In the Rhoˆne delta, a multilayered system was observed. The surficial turbid layer was enriched with fresh material of river origin. Organic matter was more altered and richer in phenols in the bottom nepheloid layer. The river regime determined the nature and quantity of suspended material: when in spate, degraded organic matter previously deposited in the river bed was transported to the sea, thereby inducing an increase of pyrolysis derived aromatic hydrocarbons. On the other hand, phenolic aldehydes increased in the bottom nepheloid layer. When water level was low, organic matter seemed to be of more local origin. The content of phenols and nitrogen-containing compounds increased. The influence of the Rhoˆne River decreased off the mouth, when terrestrial markers were diluted by products deriving from phytoplanktonic activity. Compared with suspended material, trapped organic matter was coarser, more degraded and contained more aromatic hydrocarbons. It was different in nature and size, indicating that it was trapped over a longer period. Deposits contained altered organic matter resulting from degrading processes in the water column. Sediments showed a double trend off the mouth of the river; an increase in nitrogen-containing compounds, indicating a more marine character, and a decrease in phenols and carbohydrates deriving from the terrestrial ligno-cellulosic complex. In the southwestern part of the Gulf of Lions, in the Teˆt prodelta, organic matter from sediment traps was fresher than in the Rhoˆne delta. Phenols and some carbohydrates rapidly decreased from the prodelta due to a lower runoff. During the spate, suspended material was rapidly deposited and sediments were enriched in terrestrial phenols. In the open sea environment, in the Lacaze-Duthiers Canyon at 645 m, in summer, the euphotic zone was rich in amino-sugars and contained a large diversity of phenols deriving from fish fecal pellets. In winter/spring, the development of phytoplanktonic blooms in surficial layers led to high contents of nitrogenous compounds. In deeper layers, the nature of organic matter was different from surficial layers in summer and more homogeneous in winter, although a flux of degraded material rich in pyrolysis-derived aromatic hydrocarbons and poor in nitrogenous compounds progressively sank towards the bottom. The two marine prodeltas were compared: organic matter was more degraded in suspended material and sediments collected in the submarine delta of the Rhoˆne River. Organic material originating from the river was transported further offshore, as indicated by a higher content of aromatic hydrocarbons and phenols. In the southwestern part of the Gulf of Lions, the prodelta reflected the influence of local rivers, with lower discharges.

The nature of organic carbon in density-fractionated sediments in the Sacramento-San Joaquin River Delta (California)

NASA Astrophysics Data System (ADS)

Wakeham, S. G.; Canuel, E. A.

2015-10-01

Rivers are the primary means by which sediments and carbon are transported from the terrestrial biosphere to the oceans but gaps remain in our understanding of carbon associations from source to sink. Bed sediments from the Sacramento-San Joaquin River Delta (CA) were fractionated according to density and analyzed for sediment mass distribution, elemental (C and N) composition, mineral surface area, and stable carbon and radiocarbon isotope compositions of organic carbon (OC) and fatty acids to evaluate the nature of organic carbon in river sediments. OC was unevenly distributed among density fractions. Mass and TOC were in general concentrated in mesodensity (1.6-2.0 and 2.0-2.5 g cm-3) fractions, comprising 84.0 ± 1.3 % of total sediment mass and 80.8 ± 13.3 % of total OC (TOC). Low density (< 1.6 g cm-3) material, although rich in OC (34.0 ± 2.0 % OC) due to woody debris, constituted only 17.3 ± 12.8 % of TOC. High density (> 2.5 g cm-3) organic-poor, mineral material made-up 13.7 ± 1.4 % of sediment mass and 2.0 ± 0.9 % of TOC. Stable carbon isotope compositions of sedimentary OC were relatively uniform across bulk and density fractions (δ13C -27.4 ± 0.5 ‰). Radiocarbon content varied from Δ14C values of -382 (radiocarbon age 3800 yr BP) to +94 ‰ (modern) indicating a~mix of young and pre-aged OC. Fatty acids were used to further constrain the origins of sedimentary OC. Short-chain n-C14-n-C18 fatty acids of algal origin were depleted in δ13C (δ13C -37.5 to -35.2 ‰) but were enriched in 14C (Δ14C > 0) compared to long-chain n-C24-n-C28 acids of vascular plant origins with higher δ13C (-33.0 to -31.0 ‰) but variable Δ14C values (-180 and 61 ‰). These data demonstrate the potentially complex source and age distributions found within river sediments and provide insights about sediment and organic matter supply to the Sacramento-San Joaquin River Delta.

Microbial Metabolic Response to Carbon Sources in a Uranium Contaminated Floodplain

NASA Astrophysics Data System (ADS)

Barragan, L.; Boye, K.; Bargar, J.; Fendorf, S. E.

2016-12-01

In Riverton, Wyoming, uranium (U) from a former ore processing plant, contaminated the groundwater and accumulated in Naturally Reduced Zones (NRZs). The NRZs have now become a secondary source of U and are releasing U into the ground water due to seasonal water table fluctuations. Microorganisms that mediate the mobilization and retention of U are likely to reside in these zones enriched with organic matter that comprises their energy source of carbon (C) for respiration. In this study, we are measuring microbial respiration (basal and substrate induced) by the MicroRespTM system, which is a quick screening method for respiratory activity in natural samples. This can provide information about the microbial community composition at certain depths and insight into their metabolic pathways which may explain U behavior in the ground water. In addition, we are determining elemental composition in the sediments by X-ray fluorescence spectroscopy (XRF) and elemental analysis (EA). Water soluble cations, anions and organic C is determined by inductively coupled plasma (ICP), mass spectrometry, ion chromatography (IC) and non-purgeable organic carbon (NPOC) analyses, respectively. If the behavior of the microbial community in the NRZ environment (enriched in both U and C) differs from that in unsaturated sediments, this can provide crucial clues to understand what causes U to be retained or released from the NRZs. This information will be used to develop and improve models aimed at predicting U mobility in the floodplain groundwater systems.

Methane sources and production in the northern Cascadia margin gas hydrate system

USGS Publications Warehouse

Pohlman, John; Kaneko, Masanori; Heuer, Verena B.; Coffin, Richard B.; Whiticar, Michael

2009-01-01

The oceanographic and tectonic conditions of accretionary margins are well-suited for several potential processes governing methane generation, storage and release. To identify the relevant methane evolution pathways in the northern Cascadia accretionary margin, a four-site transect was drilled during Integrated Ocean Drilling Program Expedition 311. The δ13C values of methane range from a minimum value of − 82.2‰ on an uplifted ridge of accreted sediment near the deformation front (Site U1326, 1829 mbsl, meters below sea level) to a maximum value of − 39.5‰ at the most landward location within an area of steep canyons near the shelf edge (Site U1329, 946 mbsl). An interpretation based solely on methane isotope values might conclude the 13C-enrichment of methane indicates a transition from microbially- to thermogenically-sourced methane. However, the co-existing CO2 exhibits a similar trend of 13C-enrichment along the transect with values ranging from − 22.5‰ to +25.7‰. The magnitude of the carbon isotope separation between methane and CO2 (εc = 63.8 ± 5.8) is consistent with isotope fractionation during microbially mediated carbonate reduction. These results, in conjunction with a transect-wide gaseous hydrocarbon content composed of > 99.8% (by volume) methane and uniform δDCH4 values (− 172‰ ± 8) that are distinct from thermogenic methane at a seep located 60 km from the Expedition 311 transect, suggest microbial CO2 reduction is the predominant methane source at all investigated sites. The magnitude of the intra-site downhole 13C-enrichment of CO2 within the accreted ridge (Site U1326) and a slope basin nearest the deformation front (Site U1325, 2195 mbsl) is ~ 5‰. At the mid-slope site (Site U1327, 1304 mbsl) the downhole 13C-enrichment of the CO2 is ~ 25‰ and increases to ~ 40‰ at the near-shelf edge Site U1329. This isotope fractionation pattern is indicative of more extensive diagenetic alteration at sites with greater 13C-enrichment. The magnitude of the 13C-enrichment of CO2 correlates with decreasing sedimentation rates and a diminishing occurrence of stratigraphic gas hydrate. We suggest the decreasing sedimentation rates increase the exposure time of sedimentary organic matter to aerobic and anaerobic degradation, during burial, thereby reducing the availability of metabolizable organic matter available for methane production. This process is reflected in the occurrence and distribution of gas hydrate within the northern Cascadia margin accretionary prism. Our observations are relevant for evaluating methane production and the occurrence of stratigraphic gas hydrate within other convergent margins.

Geochemical and geo-statistical assessment of selected heavy metals in the surface sediments of the Gorgan Bay, Iran.

PubMed

Bastami, Kazem Darvish; Bagheri, Hossein; Haghparast, Sarah; Soltani, Farzaneh; Hamzehpoor, Ali; Bastami, Mousa Darvish

2012-12-01

We investigated heavy metal concentrations of zinc (Zn), copper (Cu), chromium (Cr), and lead (Pb), their spatial distribution and enrichment factor index in surface sediments of the Gorgan Bay. Sediment Quality Guidelines were also applied to assess adverse biological effects of these metals. Heavy metals were determined by inductively coupled plasma-mass spectroscopy (ICP-MS). The results indicated mean concentrations (ppm) of heavy metals were (mean±S.D.) Pb: 11.5±4.88, Cu: 18±8.83, Zn: 42±22.15 and Cr: 32±15.19. Based on Enrichment index, the Gorgan Bay is a low-enriched to non-enriched bay. Heavy metal contents were lower than the standard limits of PEL, ERL, and ERM that reveal no threatening influence of the metals in the Bay. Copyright © 2012 Elsevier Ltd. All rights reserved.

Multiple-stressor effects of sediment, phosphorus and nitrogen on stream macroinvertebrate communities.

PubMed

Davis, Stephen J; Ó hUallacháin, Daire; Mellander, Per-Erik; Kelly, Ann-Marie; Matthaei, Christoph D; Piggott, Jeremy J; Kelly-Quinn, Mary

2018-05-10

Multiple stressors affect stream ecosystems worldwide and their interactions are of particular concern, with gaps existing in understanding stressor impacts on stream communities. Addressing these knowledge gaps will aid in targeting and designing of appropriate mitigation measures. In this study, the agricultural stressors fine sediment (ambient, low, medium, high), phosphorus (ambient, enriched) and nitrogen (ambient, enriched) were manipulated simultaneously in 64 streamside mesocosms to determine their individual and combined effects on the macroinvertebrate community (benthos and drift). Stressor levels were chosen to reflect those typically observed in European agricultural streams. A 21-day colonisation period was followed by a 14-day manipulative period. Results indicate that added sediment had the most pervasive effects, significantly reducing total macroinvertebrate abundance, total EPT abundance and abundances of three common EPT taxa. The greatest effect was at high sediment cover (90%), with decreasing negative impacts at medium (50%) and low (30%) covers. Added sediment also led to higher drift propensities for nine of the twelve drift variables. The effects of nitrogen and phosphorus were relatively weak compared to sediment. Several complex and unpredictable 2-way or 3-way interactions among stressors were observed. While sediment addition generally reduced total abundance at high levels, this decrease was amplified by P enrichment at low sediment, whereas the opposite effect occurred at medium sediment and little effect at high sediment. These results have direct implications for water management as they highlight the importance of managing sediment inputs while also considering the complex interactions which can occur between sediment and nutrient stressors. Copyright © 2018 Elsevier B.V. All rights reserved.

Oxygen, carbon, and nutrient exchanges at the sediment-water interface in the Mar Piccolo of Taranto (Ionian Sea, southern Italy).

PubMed

De Vittor, Cinzia; Relitti, Federica; Kralj, Martina; Covelli, Stefano; Emili, Andrea

2016-07-01

In the shallow environment, the nutrient and carbon exchanges at the sediment-water interface contribute significantly to determine the trophic status of the whole water column. The intensity of the allochthonous input in a coastal environment subjected to strong anthropogenic pressures determines an increase in the benthic oxygen demand leading to depressed oxygen levels in the bottom waters. Anoxic conditions resulting from organic enrichment can enhance the exchange of nutrients between sediments and the overlying water. In the present study, carbon and nutrient fluxes at the sediment-water interface were measured at two experimental sites, one highly and one moderately contaminated, as reference point. In situ benthic flux measurements of dissolved species (O2, DIC, DOC, N-NO3 (-), N-NO2 (-), N-NH4 (+), P-PO4 (3-), Si-Si(OH)4, H2S) were conducted using benthic chambers. Furthermore, undisturbed sediment cores were collected for analyses of total and organic C, total N, and biopolymeric carbon (carbohydrates, proteins, and lipids) as well as of dissolved species in porewaters and supernatant in order to calculate the diffusive fluxes. The sediments were characterized by suboxic to anoxic conditions with redox values more negative in the highly contaminated site, which was also characterized by higher biopolymeric carbon content (most of all lipids), lower C/N ratios and generally higher diffusive fluxes, which could result in a higher release of contaminants. A great difference was observed between diffusive and in situ benthic fluxes suggesting the enhancing of fluxes by bioturbation and the occurrence of biogeochemically important processes at the sediment-water interface. The multi-contamination of both inorganic and organic pollutants, in the sediments of the Mar Piccolo of Taranto (declared SIN in 1998), potentially transferable to the water column and to the aquatic trophic chain, is of serious concern for its ecological relevance, also considering the widespread fishing and mussel farming activities in the area.

Aquatic vegetation and trophic condition of Cape Cod (Massachusetts, U.S.A.) kettle ponds

USGS Publications Warehouse

Roman, C.T.; Barrett, N.E.; Portnoy, J.W.

2001-01-01

The species composition and relative abundance of aquatic macrophytes was evaluated in five Cape Cod, Massachusetts, freshwater kettle ponds, representing a range of trophic conditions from oligotrophic to eutrophic. At each pond, aquatic vegetation and environmental variables (slope, water depth, sediment bulk density, sediment grain size, sediment organic content and porewater inorganic nutrients) were measured along five transects extending perpendicular to the shoreline from the upland border into the pond. Based on a variety of multivariate methods, including Detrended Correspondence Analysis (DCA), an indirect gradient analysis technique, and Canonical Correspondence Analysis (CCA), a direct gradient approach, it was determined that the eutrophic Herring Pond was dominated by floating aquatic vegetation (Brasenia schreberi, Nymphoides cordata, Nymphaea odorata), and the algal stonewort, Nitella. Partial CCA suggested that high porewater PO4-P concentrations and fine-grained sediments strongly influenced the vegetation of this eutrophic pond. In contrast, vegetation of the oligotrophic Duck Pond was sparse, contained no floating aquatics, and was dominated by emergent plants. Low porewater nutrients, low sediment organic content, high water clarity and low pH (4.8) best defined the environmental characteristics of this oligotrophic pond. Gull Pond, with inorganic nitrogen-enriched sediments, also exhibited a flora quite different from the oligotrophic Duck Pond. The species composition and relative abundance of aquatic macrophytes provide good indicators of the trophic status of freshwater ponds and should be incorporated into long-term monitoring programs aimed at detecting responses to anthropogenically-derived nutrient loading.

Aquatic vegetation and trophic condition of Cape Cod (Massachusetts, USA) kettle ponds

USGS Publications Warehouse

Roman, C.T.; Barrett, N.E.; Portnoy, J.W.

2001-01-01

The species composition and relative abundance of aquatic macrophytes was evaluated in five Cape Cod, Massachusetts, freshwater kettle ponds, representing a range of trophic conditions from oligotrophic to eutrophic. At each pond, aquatic vegetation and environmental variables (slope, water depth, sediment bulk density, sediment grain size, sediment organic content and porewater inorganic nutrients) were measured along five transects extending perpendicular to the shoreline from the upland border into the pond. Based on a variety of multivariate methods, including Detrended Correspondence Analysis (DCA), an indirect gradient analysis technique, and Canonical Correspondence Analysis (CCA), a direct gradient approach, it was determined that the eutrophic Herring Pond was dominated by floating aquatic vegetation (Brasenia schreberi, Nymphoides cordata, Nymphaea odorata), and the algal stonewort, Nitella. Partial CCA suggested that high porewater PO4-P concentrations and fine-grained sediments strongly influenced the vegetation of this eutrophic pond. In contrast, vegetation of the oligotrophic Duck Pond was sparse, contained no floating aquatics, and was dominated by emergent plants. Low porewater nutrients, low sediment organic content, high water clarity and low pH (4.8) best defined the environmental characteristics of this oligotrophic pond. Gull Pond, with inorganic nitrogen-enriched sediments, also exhibited a flora quite different from the oligotrophic Duck Pond. The species composition and relative abundance of aquatic macrophytes provide good indicators of the trophic status of freshwater ponds and should be incorporated into long-term monitoring programs aimed at detecting responses to anthropogenically-derived nutrient loading.

High methylmercury production under ferruginous conditions in sediments impacted by sewage treatment plant discharges.

PubMed

Bravo, Andrea G; Bouchet, Sylvain; Guédron, Stéphane; Amouroux, David; Dominik, Janusz; Zopfi, Jakob

2015-09-01

Sewage treatment plants (STPs) are important point sources of mercury (Hg) to the environment. STPs are also significant sources of iron when hydrated ferric oxide (HFO) is used as a dephosphatation agent during water purification. In this study, we combined geochemical and microbiological characterization with Hg speciation and sediment amendments to evaluate the impact of STP's effluents on monomethylmercury (MMHg) production. The highest in-situ Hg methylation was found close to the discharge pipe in subsurface sediments enriched with Hg, organic matter, and iron. There, ferruginous conditions were prevailing with high concentrations of dissolved Fe(2+) and virtually no free sulfide in the porewater. Sediment incubations demonstrated that the high MMHg production close to the discharge was controlled by low demethylation yields. Inhibition of dissimilatory sulfate reduction with molybdate led to increased iron reduction rates and Hg-methylation, suggesting that sulfate-reducing bacteria (SRB) may not have been the main Hg methylators under these conditions. However, Hg methylation in sediments amended with amorphous Fe(III)-oxides was only slightly higher than control conditions. Thus, in addition to iron-reducing bacteria, other non-SRB most likely contributed to Hg methylation. Overall, this study highlights that sediments impacted by STP discharges can become local hot-spots for Hg methylation due to the combined inputs of i) Hg, ii) organic matter, which fuels bacterial activities and iii) iron, which keeps porewater sulfide concentration low and hence Hg bioavailable. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Distribution Characteristics and Pollution Status Evaluation of Sediments Nutrients in a Drinking Water Reservoir].

PubMed

Huang, Ting-lin; Liu, Fei; Shi, Jian-chao

2016-01-15

The main purpose of this paper is to illustrate the influence of nutrients distribution in sediments on the eutrophication of drinking water reservoir. The sediments of three representative locations were field-sampled and analyzed in laboratory in March 2015. The distribution characteristics of TOC, TN and TP were measured, and the pollution status of sediments was evaluated by the comprehensive pollution index and the manual for sediment quality assessment. The content of TOC in sediments decreased with depth, and there was an increasing trend of the nitrogen content. The TP was enriched in surface sediment, implying the nutrients load in Zhoucun Reservoir was aggravating as the result of human activities. Regression analysis indicated that the content of TOC in sediments was positively correlated with contents of TN and TP in sediments. The TOC/TN values reflected that the vascular land plants, which contain cellulose, were the main source of organic matter in sediments. The comprehensive pollution index analysis result showed that the surface sediments in all three sampling sites were heavily polluted. The contents of TN and TP of surface sediments in three sampling sites were 3273-4870 mg x kg(-1) and 653-2969 mg x kg(-1), and the content of TOC was 45.65-83.00 mg x g(-1). According to the manual for sediment quality assessment, the TN, TP and TOC contents in sediments exceed the standard values for the lowest level of ecotoxicity, so there is a risk of eutrophication in Zhoucun Reservoir.

Common Hydraulic Fracturing Fluid Additives Alter the Structure and Function of Anaerobic Microbial Communities.

PubMed

Mumford, Adam C; Akob, Denise M; Klinges, J Grace; Cozzarelli, Isabelle M

2018-04-15

The development of unconventional oil and gas (UOG) resources results in the production of large volumes of wastewater containing a complex mixture of hydraulic fracturing chemical additives and components from the formation. The release of these wastewaters into the environment poses potential risks that are poorly understood. Microbial communities in stream sediments form the base of the food chain and may serve as sentinels for changes in stream health. Iron-reducing organisms have been shown to play a role in the biodegradation of a wide range of organic compounds, and so to evaluate their response to UOG wastewater, we enriched anaerobic microbial communities from sediments collected upstream (background) and downstream (impacted) of an UOG wastewater injection disposal facility in the presence of hydraulic fracturing fluid (HFF) additives: guar gum, ethylene glycol, and two biocides, 2,2-dibromo-3-nitrilopropionamide (DBNPA) and bronopol (C 3 H 6 BrNO 4 ). Iron reduction was significantly inhibited early in the incubations with the addition of biocides, whereas amendment with guar gum and ethylene glycol stimulated iron reduction relative to levels in the unamended controls. Changes in the microbial community structure were observed across all treatments, indicating the potential for even small amounts of UOG wastewater components to influence natural microbial processes. The microbial community structure differed between enrichments with background and impacted sediments, suggesting that impacted sediments may have been preconditioned by exposure to wastewater. These experiments demonstrated the potential for biocides to significantly decrease iron reduction rates immediately following a spill and demonstrated how microbial communities previously exposed to UOG wastewater may be more resilient to additional spills. IMPORTANCE Organic components of UOG wastewater can alter microbial communities and biogeochemical processes, which could alter the rates of essential natural attenuation processes. These findings provide new insights into microbial responses following a release of UOG wastewaters and are critical for identifying strategies for the remediation and natural attenuation of impacted environments. This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.

Nematode feeding strategies and the fate of dissolved organic matter carbon in different deep-sea sedimentary environments

NASA Astrophysics Data System (ADS)

Pape, Ellen; van Oevelen, Dick; Moodley, Leon; Soetaert, Karline; Vanreusel, Ann

2013-10-01

Sediments sampled from the Galicia Bank seamount and the adjacent slope (northeast Atlantic), and from a western Mediterranean slope site, were injected onboard with 13C-enriched dissolved organic matter (DOM) to evaluate nematode feeding strategies and the fate of DOM carbon in different benthic environments. We hypothesized that nematode 13C label assimilation resulted from either direct DOM uptake or feeding on 13C labeled bacteria. Slope sediments were injected with glucose ("simple" DOM) or "complex" diatom-derived DOM to investigate the influence of DOM composition on carbon assimilation. The time-series (1, 7 and 14 days) experiment at the seamount site was the first study to reveal a higher 13C enrichment of nematodes than bacteria and sediments after 7 days. Although isotope dynamics indicated that both DOM and bacteria were plausible candidate food sources, the contribution to nematode secondary production and metabolic requirements (estimated from biomass-dependent respiration rates) was higher for bacteria than for DOM at all sites. The seamount nematode community showed higher carbon assimilation rates than the slope assemblages, which may reflect an adaptation to the food-poor environment. Our results suggested that the trophic importance of bacteria did not depend on the amount of labile sedimentary organic matter. Furthermore, there was a discrepancy between carbon assimilation rates observed in the experiments and the feeding type classification, based on buccal morphology. Sites with a similar feeding type composition (i.e. the northeast Atlantic sites) showed large differences in uptake, whilst the nematode assemblages at the two slope sites, which had a differing trophic structure, took up similar amounts of the DOM associated carbon. Our results did not indicate substantial differences in carbon processing related to the complexity of the DOM substrate. The quantity of processed carbon (5-42% of added DOM) was determined by the bacteria, and was primarily respired. The bulk of the added 13C-DOM was not ingested by the benthic biota under study, and a considerable fraction was possibly adsorbed onto the sediment grains.

Investigation of reductive dechlorination supported by natural organic carbon

USGS Publications Warehouse

Rectanus, H.V.; Widdowson, M.A.; Chapelle, F.H.; Kelly, C.A.; Novak, J.T.

2007-01-01

Because remediation timeframes using monitored natural attenuation may span decades or even centuries at chlorinated solvent sites, new approaches are needed to assess the long-term sustainability of reductive dechlorination in ground water systems. In this study, extraction procedures were used to investigate the mass of indigenous organic carbon in aquifer sediment, and experiments were conducted to determine if the extracted carbon could support reductive dechlorination of chloroethenes. Aquifer sediment cores were collected from a site without an anthropogenic source of organic carbon where organic carbon varied from 0.02% to 0.12%. Single extraction results showed that 1% to 28% of sediment-associated organic carbon and 2% to 36% of the soft carbon were removed depending on nature and concentration of the extracting solution (Nanopure water; 0.1%, 0.5%, and 1.0% sodium pyrophosphate; and 0.5 N sodium hydroxide). Soft carbon is defined as organic carbon oxidized with potassium persulfate and is assumed to serve as a source of biodegradable carbon within the aquifer. Biodegradability studies demonstrated that 20% to 40% of extracted organic carbon was biodegraded aerobically and anaerobically by soil microorganisms in relatively brief tests (45 d). A five-step extraction procedure consisting of 0.1% pyrophosphate and base solutions was investigated to quantify bioavailable organic carbon. Using the extracted carbon as the sole electron donor source, tetrachloroethene was transformed to cis-1,2- dichloroethene and vinyl chloride in anaerobic enrichment culture experiments. Hydrogen gas was produced at levels necessary to sustain reductive dechlorination (>1 nM). ?? 2007 National Ground Water Association.

Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment

NASA Astrophysics Data System (ADS)

Zhu, R.; Lin, Y.-S.; Lipp, J. S.; Meador, T. B.; Hinrichs, K.-U.

2014-01-01

Amino sugars are quantitatively significant constituents of soil and marine sediment, but their sources and turnover in environmental samples remain poorly understood. The stable carbon isotopic composition of amino sugars can provide information on the lifestyles of their source organisms and can be monitored during incubations with labeled substrates to estimate the turnover rates of microbial populations. However, until now, such investigation has been carried out only with soil samples, partly because of the much lower abundance of amino sugars in marine environments. We therefore optimized a procedure for compound-specific isotopic analysis of amino sugars in marine sediment employing gas chromatography-isotope ratio mass spectrometry. The whole procedure consisted of hydrolysis, neutralization, enrichment, and derivatization of amino sugars. Except for the derivatization step, the protocol introduced negligible isotopic fractionation, and the minimum requirement of amino sugar for isotopic analysis was 20 ng, i.e. equivalent to ~ 8 ng of amino sugar carbon. Our results obtained from δ13C analysis of amino sugars in selected marine sediment samples showed that muramic acid had isotopic imprints from indigenous bacterial activities, whereas glucosamine and galactosamine were mainly derived from organic detritus. The analysis of stable carbon isotopic compositions of amino sugars opens a promising window for the investigation of microbial metabolisms in marine sediments and the deep marine biosphere.

Mercury speciation and dispersion from an active gold mine at the West Wits area, South Africa.

PubMed

Lusilao-Makiese, J G; Tessier, E; Amouroux, D; Tutu, H; Chimuka, L; Weiersbye, I; Cukrowska, E M

2016-01-01

Total mercury (HgTOT), inorganic mercury (IHg), and methylmercury (MHg) were determined in dry season waters, sediments, and tailings from an active mine which has long history of gold exploitation. Although HgTOT in waters was generally low (0.03 to 19.60 ng L(-1)), the majority of the samples had proportions of MHg of at least 90 % of HgTOT which denotes a substantial methylation potential of the mine watersheds. Mercury was relatively high in tailing materials (up to 867 μg kg(-1)) and also in the mine sediments (up to 837 μg kg(-1)) especially in samples collected near tailing storage facilities and within a receiving water dam. Sediment profiles revealed mercury enrichment and enhanced methylation rate at deeper layers. The presence of IHg and decaying plants (organic matter) in the watersheds as well as the anoxic conditions of bulk sediments are believed to be some of the key factors favoring the mercury methylation at the site.

Metal concentrations in aquatic environments of Puebla River basin, Mexico: natural and industrial influences.

PubMed

Morales-García, S S; Rodríguez-Espinosa, P F; Shruti, V C; Jonathan, M P; Martínez-Tavera, E

2017-01-01

The rapid urban expansion and presence of volcanoes in the premises of Puebla River basin in central Mexico exert significant influences over its aquatic environments. Twenty surface sediment samples from Puebla River basin consisting of R. Alseseca, R. Atoyac, and Valsequillo dam were collected during September 2009 and analyzed for major (Al, Fe, Mg, Ba, Ca, and K) and trace elements (As, Cd, Co, Cr, Cu, Mn, Ni, Pb, Sr, V, and Zn) in order to identify the metal concentrations and their enrichment. R. Atoyac sediments presented higher concentrations of Ba (1193.8 μg g -1 ) and Pb (27.1 μg g -1 ) in comparison with the local reference sample values. All the metal concentrations except Sr for R. Alseseca sediments were within the range of local reference sample values indicating no significant external influence, whereas Valsequillo dam sediments had elevated concentrations of all the metals suggesting both natural and external influences in the study region. The magnitude of metal contamination was assessed using several indices such as geoaccumulation index (I geo ), enrichment factor (EF), degree of contamination (C d ), and pollution load index (PLI). The results suggest that As, Pb, and Zn were predominantly enriched in the Puebla River basin sediments. Comparing with sediment quality guidelines and ecotoxicological values, it is revealed that Cd, Cr, Cu, and Ni have possible harmful effects on the biological community. The present study provides an outlook of metal enrichment in Puebla River basin sediments, highlighting the necessity to conserve this river ecosystem for the near future.

Unusual very positive enrichment of 13C in carbonate sediments deposited in modern hypersaline environment, Lagoa Salgada, Brazil: Indicator of salinity controlled metabolic processes

NASA Astrophysics Data System (ADS)

McKenzie, J. A.; Bovier, C.; Bahniuk, A.; Andersen, M. B.; Vasconcelos, C.

2016-12-01

In the geologic record, prolonged intervals of intense δ13C enrichment (>10‰) in carbonate deposits occurred, in particular during the mid-Palaeoproterozoic (2.3-1.9 Ga) and mid-Neoproterozoic (0.8-0.6 Ga) [1]. These anomalously high δ13C values have been interpreted as a global effect due to enhanced burial of organic matter with depleted δ13C values [2]. An alternate interpretation has been proposed whereby the metabolic activity of specific microbial communities, such as methanogens, may have been the source of the strong carbon isotope fractionation [3]. Although such restricted shallow-water environments where methanogens dominate are not widespread today, a unique hypersaline coastal lagoon system, Lagoa Salgada, Brazil provides ideal conditions to study the modern microbial community and its impact on observed extreme δ13C enrichment (up to 20‰) recorded in both in situ stromatolites and carbonate sediments. Here we present our findings and correlations of geochemical data with changing environmental conditions during the last 2600 cal yr BP. This lagoonal system contains highly evaporated water with highest salinities occurring during the dry season. The positive δ13C anomaly shows high and stable values (>14‰) from about 2100 to 1400 cal yr BP. Similar high δ13C values were recorded for the same time period in stromatolite structures growing around the margin of Lagoa Salgada. We propose that the high salinities inhibit photosynthesis, respiration and nitrogen fixation by osmotic stress and, thus, result in increased methanogenesis. We conclude that the combination of methanogenic metabolisms and extreme evaporative conditions is the key factor promoting the production of very high δ13C values observed throughout the lagoonal system, as recorded in both marginal stromatolites and carbonate sediments deposited in the more distal regions of the lagoon. Such unusual environments may have been more widely distributed during the Proterozoic accounting for the intense δ13C enrichment (>10‰) observed in the sedimentary record. [1] Shields G and Veizer J (2002) Geochem. Geophys. Geosyst. 3(6): 10.1029 [2] Schidlowski M (1993) In: Organic Geochemistry: Plenum Press, 639-655 [3] Hayes JM and Waldbauer J Jr (2006) Philosophical Trans. Royal Soc. B Biological Sciences 361: 931-950

Diagenetic silica enrichment and late-stage groundwater activity in Gale crater, Mars

USGS Publications Warehouse

Frydenvang, Jens; Gasda, Patrick J.; Hurowitz, Joel A.; Grotzinger, John P.; Wiens, Roger C.; Newsom, Horton E.; Edgett, Ken S.; Watkins, Jessica; Bridges, John C.; Maurice, Sylvestre; Fisk, Martin R.; Johnson, Jeffrey R.; Rapin, William; Stein, Nathan; Clegg, Sam M.; Schwenzer, S. P.; Bedford, C.; Edwards, P.; Mangold, Nicolas; Cousin, Agnes; Anderson, Ryan; Payre, Valerie; Vaniman, David; Blake, David; Lanza, Nina L.; Gupta, Sanjeev; Van Beek, Jason; Sautter, Violaine; Meslin, Pierre-Yves; Rice, Melissa; Milliken, Ralf; Gellert, Ralf; Thompson, Lucy; Clark, Ben C.; Sumner, Dawn Y.; Fraeman, Abigail A.; Kinch, Kjartan M; Madsen, Morten B.; Mitofranov, Igor; Jun, Insoo; Calef, Fred J.; Vasavada, Ashwin R.

2017-01-01

Diagenetic silica enrichment in fracture-associated halos that crosscut lacustrine and unconformably overlying aeolian sedimentary bedrock is observed on the lower north slope of Aeolis Mons in Gale crater, Mars. The diagenetic silica enrichment is colocated with detrital silica enrichment observed in the lacustrine bedrock yet extends into a considerably younger, unconformably draping aeolian sandstone, implying that diagenetic silica enrichment postdates the detrital silica enrichment. A causal connection between the detrital and diagenetic silica enrichment implies that water was present in the subsurface of Gale crater long after deposition of the lacustrine sediments and that it mobilized detrital amorphous silica and precipitated it along fractures in the overlying bedrock. Although absolute timing is uncertain, the observed diagenesis likely represents some of the most recent groundwater activity in Gale crater and suggests that the timescale of potential habitability extended considerably beyond the time that the lacustrine sediments of Aeolis Mons were deposited.

Rapid assay for microbially reducible ferric iron in aquatic sediments

USGS Publications Warehouse

Lovely, Derek R.; Philips , Elizabeth J.P.

1987-01-01

The availability of ferric iron for microbial reduction as directly determined by the activity of iron-reducing organisms was compared with its availability as determined by a newly developed chemical assay for microbially reducible iron. The chemical assay was based on the reduction of poorly crystalline ferric iron by hydroxylamine under acidic conditions. There was a strong correlation between the extent to which hydroxylamine could reduce various synthetic ferric iron forms and the susceptibility of the iron to microbial reduction in an enrichment culture of iron-reducing organisms. When sediments that contained hydroxylamine-reducible ferric iron were incubated under anaerobic conditions, ferrous iron accumulated as the concentration of hydroxylamine-reducible ferric iron declined over time. Ferrous iron production stopped as soon as the hydroxylamine-reducible ferric iron was depleted. In anaerobic incubations of reduced sediments that did not contain hydroxylamine-reducible ferric iron, there was no microbial iron reduction, even though the sediments contained high concentrations of oxalate-extractable ferric iron. A correspondence between the presence of hydroxylamine-reducible ferric iron and the extent of ferric iron reduction in anaerobic incubations was observed in sediments from an aquifer and in fresh- and brackish-water sediments from the Potomac River estuary. The assay is a significant improvement over previously described procedures for the determination of hydroxylamine-reducible ferric iron because it provides a correction for the high concentrations of solid ferrous iron which may also be extracted from sediments with acid. This is a rapid, simple technique to determine whether ferric iron is available for microbial reduction.

Shallow water marine sediment bacterial community shifts along a natural CO2 gradient in the Mediterranean Sea off Vulcano, Italy.

PubMed

Kerfahi, Dorsaf; Hall-Spencer, Jason M; Tripathi, Binu M; Milazzo, Marco; Lee, Junghoon; Adams, Jonathan M

2014-05-01

The effects of increasing atmospheric CO(2) on ocean ecosystems are a major environmental concern, as rapid shoaling of the carbonate saturation horizon is exposing vast areas of marine sediments to corrosive waters worldwide. Natural CO(2) gradients off Vulcano, Italy, have revealed profound ecosystem changes along rocky shore habitats as carbonate saturation levels decrease, but no investigations have yet been made of the sedimentary habitat. Here, we sampled the upper 2 cm of volcanic sand in three zones, ambient (median pCO(2) 419 μatm, minimum Ω(arag) 3.77), moderately CO(2)-enriched (median pCO(2) 592 μatm, minimum Ω(arag) 2.96), and highly CO(2)-enriched (median pCO(2) 1611 μatm, minimum Ω(arag) 0.35). We tested the hypothesis that increasing levels of seawater pCO(2) would cause significant shifts in sediment bacterial community composition, as shown recently in epilithic biofilms at the study site. In this study, 454 pyrosequencing of the V1 to V3 region of the 16S rRNA gene revealed a shift in community composition with increasing pCO(2). The relative abundances of most of the dominant genera were unaffected by the pCO(2) gradient, although there were significant differences for some 5 % of the genera present (viz. Georgenia, Lutibacter, Photobacterium, Acinetobacter, and Paenibacillus), and Shannon Diversity was greatest in sediments subject to long-term acidification (>100 years). Overall, this supports the view that globally increased ocean pCO(2) will be associated with changes in sediment bacterial community composition but that most of these organisms are resilient. However, further work is required to assess whether these results apply to other types of coastal sediments and whether the changes in relative abundance of bacterial taxa that we observed can significantly alter the biogeochemical functions of marine sediments.

Climate warming and agricultural stressors interact to determine stream macroinvertebrate community dynamics.

PubMed

Piggott, Jeremy J; Townsend, Colin R; Matthaei, Christoph D

2015-05-01

Global climate change is likely to modify the ecological consequences of currently acting stressors, but potentially important interactions between climate warming and land-use related stressors remain largely unknown. Agriculture affects streams and rivers worldwide, including via nutrient enrichment and increased fine sediment input. We manipulated nutrients (simulating agricultural run-off) and deposited fine sediment (simulating agricultural erosion) (two levels each) and water temperature (eight levels, 0-6°C above ambient) simultaneously in 128 streamside mesocosms to determine the individual and combined effects of the three stressors on macroinvertebrate community dynamics (community composition and body size structure of benthic, drift and insect emergence assemblages). All three stressors had pervasive individual effects, but in combination often produced additive or antagonistic outcomes. Changes in benthic community composition showed a complex interplay among habitat quality (with or without sediment), resource availability (with or without nutrient enrichment) and the behavioural/physiological tendency to drift or emerge as temperature rose. The presence of sediment and raised temperature both resulted in a community of smaller organisms. Deposited fine sediment strongly increased the propensity to drift. Stressor effects were most prominent in the benthic assemblage, frequently reflected by opposite patterns in individuals quitting the benthos (in terms of their propensity to drift or emerge). Of particular importance is that community measures of stream health routinely used around the world (taxon richness, EPT richness and diversity) all showed complex three-way interactions, with either a consistently stronger temperature response or a reversal of its direction when one or both agricultural stressors were also in operation. The negative effects of added fine sediment, which were often stronger at raised temperatures, suggest that streams already impacted by high sediment loads may be further degraded under a warming climate. However, the degree to which this will occur may also depend on in-stream nutrient conditions. © 2015 John Wiley & Sons Ltd.

Fate of microbial nitrogen, carbon, hydrolysable amino acids, monosaccharides, and fatty acids in sediment

NASA Astrophysics Data System (ADS)

Veuger, Bart; van Oevelen, Dick; Middelburg, Jack J.

2012-04-01

The fate of microbial carbon, nitrogen, hydrolysable amino acids (HAAs), monosaccharides, and fatty acids in sediment was investigated experimentally. The microbial community of a tidal flat sediment was labeled with 13C-enriched glucose and 15N-enriched ammonium, and sediment was incubated for up to 371 days. Analysis of total concentrations and 13C- and 15N content of bulk sediment, hydrolysable amino acids (including D-alanine), monosaccharides, total fatty acids (TFAs), and phospholipid-derived fatty acids (PLFAs) allowed us to trace the fate of microbial biomass and -detritus and the major biochemical groups therein (proteins, carbohydrates, and lipids) over intermediate time scales (weeks-months). Moreover, the unidentified fraction of the labeled material (i.e. not analyzed as HAA, FA, or carbohydrate) provided information on the formation and fate of molecularly uncharacterizable organic matter. Loss of 13C and 15N from the sediment was slow (half live of 433 days) which may have been due to the permanently anoxic conditions in the experiment. Loss rates for the different biochemical groups were also low with the following order of loss rate constants: PLFA > TFA > HAA > monosaccharides. The unidentified 13C-pool was rapidly formed (within days) and then decreased relatively slowly, resulting in a gradual relative accumulation of this pool over time. Degradation and microbial reworking of the labeled material resulted in subtle, yet consistent, diagenetic changes within the different biochemical groups. In the HAA pool, glycine, lysine, and proline were lost relatively slowly (i.e. best preserved) while there was no accumulation of D-alanine relative to L-alanine, indicating no relative accumulation of bacterial macromolecules rich in D-alanine. In the fatty acid pool, there was very little difference between PLFAs and TFAs, indicating a very similar lability of these pools. Differences between individual fatty acids included a relatively slow loss of i15:0, ai15:0 and 18:1ω7c which likely resulted from production of these bacterial fatty acids during bacterial reworking of the organic matter. Differences between loss rate constants for individual monosaccharides were not significant. An exception was ribose that was produced and lost relatively rapidly, which may be related to ribose being an important component of RNA. Losses of bulk 13C and 15N were closely coupled despite partly being present in different biochemicals and partly being derived from different microbial sources, indicating no selective preservation of either C or N during organic matter diagenesis.

Effect Of Iron On The Sensitivity Of Hydrogen, Acetate, And Butyrate Metabolism To Inhibition By Long-Chain Fatty Acids In Vegetable-Oil-Enriched Freshwater Sediments

EPA Science Inventory

Freshwater sediment microbial communities enriched by growth on vegetable oil in the presence of a substoichiometric amount of ferric hydroxide (sufficient to accept about 12% of the vegetable-oil-derived electrons) degrade vegetable oil to methane faster than similar microbial c...

The Origin of EM1 Signatures in Basalts From Tristan da Cunha and Gough

NASA Astrophysics Data System (ADS)

Stracke, A.; Willbold, M.; Hemond, C.

2004-12-01

A long-standing hypothesis is that enriched mantle 1 (EM-1)-type ocean island basalt (OIB) sources contain pelagic sediments. Pelagic sediments range in composition from clays to calcareous or siliceous oozes and encompass a wide range of chemical compositions [1]. For geochemical purposes the use of the term pelagic sediments is often restricted to a special group of pelagic sediments with distinctive enrichment of Rare Earth Elements (REE). The geochemical composition of such REE-enriched pelagic sediments, however, is by no means representative of the geochemical composition of pelagic sediments in general. The extremely high REE/non-REE element ratios in REE-enriched pelagic sediments (e.g. high Lu/Hf, Sm/Hf, La/Nb, La/Th, Eu/Ti, and Gd/Ti ratios) translate into high 176Hf/177Hf ratios for given 143Nd/144Nd ratios with time. OIB sources containing this special variety of REE-enriched pelagic sediment should therefore plot above the oceanic basalt array and mixing arrays with these sources are expected to have a shallow slope in a Hf-Nd isotope diagram. Here we present new Hf-Nd isotope and trace element data for EM-1-type OIB from Tristan da Cunha and Gough in the South Atlantic Ocean. The samples from Tristan have a small range in Hf-Nd isotopic composition and plot within the oceanic basalt array in a Hf-Nd isotope diagram. Samples from Gough form a trend with a slope slightly steeper than that of the ocean basalt array in a Hf-Nd isotope diagram. OIB in general have a very restricted range in Gd/Ti and Sm/Hf ratios, and high La/Nb are associated with low Lu/Hf ratios. In detail, samples from Tristan and Gough have the lowest Lu/Hf and highest La/Nb ratios. Thus from the combined Hf-Nd isotope and trace element composition of basalts from Tristan and Gough involvement of this special variety of (REE-enriched) pelagic sediments can be excluded. Similar observations are made, and thus similar arguments hold, for other EM-1-type localities (Walvis ridge [2] and Pitcairn island [3]). Due to the considerable spread in geochemical composition of pelagic or any other group of sediments (e.g. marine sediments with a higher proportion of terrigenous components), it is difficult to attribute characteristic elemental or isotopic signatures to certain groups of sediment. Moreover, subducting sediments are complex mixtures of different types of sediment [1]. Thus it is difficult to find unique evidence either in favor of or against the involvement of sediments in general at Tristan and Gough, or any other individual OIB locality. Also, it appears highly unlikely that sub-arc processing has an equalizing effect on the composition of different subducting sediments [4]. Associating the similar isotopic characteristics of certain OIB groups and/or mantle-end-members (e.g. EM-1) to recycled sediments is therefore also problematic. [1] Plank, T. and C. H. Langmuir, Chem. Geol., 145, 325-394, 1998. [2] Salters, V. J. M. and X. Li, Geochim. Cosmochim. Acta, 68, A554, 2004. [3] Eisele, J., M. Sharma, J. G. Galer, J. Blichert-Toft, C. W. Devey and A. W. Hofmann, Earth Plan. Sci. Lett., 196, 197-212, 2002. [4] Johnson, M. C. and T. Plank, Geochem., Geophys., Geosys., 1, pp. 29, 1999.

Heavy Metal Enrichment History in annually laminated Lake Tiefer See (NE-Germany) and Lake Czechowskie (N-Poland)

NASA Astrophysics Data System (ADS)

Hoelzmann, Philipp; Dräger, Nadine; Kienel, Ulrike; Ott, Florian; Brauer, Achim

2015-04-01

Within the Virtual Institute of Integrated Climate and Landscape Evolution Analyses (ICLEA) high-resolution geo-archives (e.g. lakes as natural data loggers) of the northeastern german and northern polish lowlands are investigated to identify influences of land-use on the landscape evolution. For two annually laminated lake sediment records, situated in rural environments in NE-Germany (Lake Tiefer See) and N-Poland (Czechowskie Lake), we present a detailed heavy metal enrichment history for Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, and Zn for the last two hundred years at 1 cm intervals. Both lakes show a similar pattern of relatively low heavy metal concentrations if compared to the so-called index of geoaccumulation (Müller 1979), which is based on the average global metal content in shales (Turekian and Wedepohl, 1961). Only Pb, Zn and Cd show a clear parallel pattern of enrichment in both lakes starting around 1850 according to mainly atmospheric input due to increasing industrialization within the framework of the Industrial Revolution. Highest input for Cd, Zn, and Pb occur around 1960 to 1980 and thereafter a clear pattern of declining anthropogenic input is registered. On the base of heavy-metal analysis of pre-industrial sediments and different sediment types (e.g. calcareous gyttja, organic gyttja etc.) the local and specific geogenic background values for various metals are determined. These results provide means to calculate and quantify with sub-decadal resolution anthropogenic heavy metal accumulations and enrichment factors as well as to define regional measures for a state of reference, reflecting natural conditions without human impact. Müller, G. (1979): Schwermetalle in den Sedimenten des Rheins - Veränderungen seit 1971. Umschau 79: 778-783. Turekian, K. and Wedepohl, K. (1961): Distribution of the elements in some major units of the earth's crust. Bull.Geol.Soc.Am. 72: 175-192.

The Study of Heavy Metals on Sediment Quality of Kuala Perlis Coastal Area

NASA Astrophysics Data System (ADS)

Zubir, A. A. Ahmad; Saad, F. N. Mohd; Dahalan, F. A.

2018-03-01

The contamination of heavy metals gives bad implications to the aquatic environment. Thus, a study was conducted to assess the sediment quality by using different contamination indices such as Enrichment Factor (EF), Geo-accumulation Index (Igeo), and Pollution Load Index (PLI). Each sediment sample was collected at the surface (0-15cm) at 5 locations based on the land use activity; jetty port (A), seaside restaurant (B), roadside area (C), power plant (D) and residential area (E). All samples were undergoes acid digestion and analyzed with AAS. Four elements identified from the sediment samples which are Cr, Cu, Pb and Zn were used to calculate the respective indices. Results show that, the highest EF value of Pb which categorized as very severe enrichment was at point E. Meanwhile minor enrichment was detected at point B for Cu while Cr and Zn at point A. Based on Igeo value the sediment quality along Kuala Perlis was in the unpolluted-moderately polluted condition (class 1). As for PLI it shows that the sediment of the coastal area is unpolluted (PLI<1). Therefore, this study revealed that, the main contributor of heavy metals in this area is Pb while the sediment quality of Kuala Perlis was in minor pollution condition.

Distribution of long-lived radioactive iodine isotope (I-129) in pore waters from the gas hydrate fields on the continental margins: Indication for methane source of gas hydrate deposits

NASA Astrophysics Data System (ADS)

Tomaru, H.; Lu, Z.; Fehn, U.

2011-12-01

Because iodine has a strong association with organic matters in marine environments, pore waters in high methane potential region, in particular gas hydrate occurrences on the continental margins, are enriched significantly in iodine compared with seawater. Natural iodine system is composed of stable and radioactive species, I-129 (half-life of 15.7 Myr) has been used for estimating the age of source formations both for methane and iodine, because iodine can be liberated into pore water during the degradation of organic matter to methane in deep sediments. Here we present I-129 age data in pore waters collected from variety of gas hydrate occurrences on the continental margins. The I-129 ages in pore waters from these locations are significantly older than those of host sediments, indicating long-term transport and accumulation from deep/old sediments. The I-129 ages in the Japan Sea and Okhotsk Sea along the plate boundary between the North American and Amurian Plates correspond to the ages of initial spreading of these marginal seas, pointing to the massive deposition of organic matter for methane generation in deep sediments within limited periods. On the Pacific side of these areas, organic matter-rich back stop is responsible for methane in deep-seated gas hydrate deposits along the Nankai Trough. Deep coaly sequences responsible for deep conventional natural gas deposits are also responsible for overlying gas hydrate deposits off Shimokita Peninsula, NE Japan. Those in the Gulf of Mexico are correlative to the ages of sediments where the top of salt diapirs intrude. Marine sediments on the Pacific Plate subducting beneath the Australian Plate are likely responsible for the methane and iodine in the Hikurangi Trough, New Zealand. These ages reflect well the regional geological settings responsible for generation, transport, and accumulation of methane, I-129 is a key to understand the geological history of gas hydrate deposition.

Development of an Advanced Respirometer for Experimental Studies of Benthic Rate Processes

NASA Astrophysics Data System (ADS)

Barry, J. P.; Buck, K. R.; Okuda, C.; Risi, M.; Parker, M.; Levesque, C.

2005-05-01

Rates of carbon remineralization and nutrient cycling by seafloor biotic assemblages are influenced by the availability of organic material, temperature, and oxygen availability, among other factors. The relative importance of various factors in controlling carbon cycling by the sediment community is poorly constrained, in part by technological limits on experiments that evaluate independently the effects of these factors. We have developed an advanced respiration chamber system capable of repeated rate measurements during a single deployment, with added capabilities for manipulating conditions within replicate chambers to test hypotheses concerning biogeochemical cycling by the benthos. The ROV-deployed respiration system has 12 syringes for tracer injection or sample withdrawal from 3 respiration chambers, pH, oxygen, and temperature sensors, stirring paddles, and a recirculation pump. The pump system is used to flush each chamber at preprogrammed intervals or oxygen tensions. Areas of investigation that are enabled by the system include the effects various factors on benthic oxygen consumptions (e.g. hypercapnia (elevated CO2), acidosis, ambient oxygen availability, temperature, organic carbon availability), rates of nutrient regeneration by the benthos in response to organic enrichments (labile and refractory organic carbon), time lags in carbon uptake and trophic pathways in responses to organic enrichment.

Ecological risk assessment of a coastal zone in Southern Vietnam: Spatial distribution and content of heavy metals in water and surface sediments of the Thi Vai Estuary and Can Gio Mangrove Forest.

PubMed

Costa-Böddeker, Sandra; Hoelzmann, Philipp; Thuyên, Lê Xuân; Huy, Hoang Duc; Nguyen, Hoang Anh; Richter, Otto; Schwalb, Antje

2017-01-30

Enrichment of heavy metals was assessed in the Thi Vai Estuary and in the Can Gio Mangrove Forest (SE, Vietnam). Cd, Co, Cr, Cu, Mn, Ni, Pb and Zn contents in water and in sediments were measured. Total organic carbon, nitrogen, phosphorus and C/N ratios were determined. Cu and Cr values were higher than threshold effect level of toxicity, while Ni exceeded probable effect level, indicating the risk of probable toxicity effects. Enrichment factors (EF), contamination factor (CF) and Geo-accumulation index (I-geo) were determined. CF reveals moderate to considerable pollution with Cr and Ni. EF suggests anthropogenic sources of Cr, Cu and Ni. I-geo indicates low contamination with Co, Cu and Zn and moderate contamination with Cr and Ni. Overall metal contents were lower than expected for this highly industrialized region, probably due to dilution, suggesting that erosion rates and hydrodynamics may also play a role in metal contents distribution. Copyright © 2016 Elsevier Ltd. All rights reserved.

Ecosystem-level studies of terrestrial carbon reveal contrasting bacterial metabolism in different aquatic habitats.

PubMed

Attermeyer, Katrin; Premke, Katrin; Hornick, Thomas; Hilt, Sabine; Grossart, Hans-Peter

2013-12-01

In aquatic systems, terrestrial dissolved organic matter (t-DOM) is known to stimulate bacterial activities in the water column, but simultaneous effects of autumnal leaf input on water column and sediment microbial dynamics in littoral zones of lakes remain largely unknown. The study's objective was to determine the effects of leaf litter on bacterial metabolism in the littoral water and sediment, and subsequently, the consequences for carbon cycling and food web dynamics. Therefore, in late fall, we simultaneously measured water and sediment bacterial metabolism in the littoral zone of a temperate shallow lake after adding terrestrial particulate organic matter (t-POM), namely, maize leaves. To better evaluate bacterial production (BP) and community respiration (CR) in sediments, we incubated sediment cores with maize leaves of different quality (nonleached and leached) under controlled laboratory conditions. Additionally, to quantify the incorporated leaf carbon into microbial biomass, we determined carbon isotopic ratios of fatty acids from sediment and leaf-associated microbes from a laboratory experiment using 13C-enriched beech leaves. The concentrations of dissolved organic carbon (DOC) increased significantly in the lake after the addition of maize leaves, accompanied by a significant increase in water BP. In contrast, sediment BP declined after an initial peak, showing no positive response to t-POM addition. Sediment BP and CR were also not stimulated by t-POM in the laboratory experiment, either in short-term or in long-term incubations, except for a short increase in CR after 18 hours. However, this increase might have reflected the metabolism of leaf-associated microorganisms. We conclude that the leached t-DOM is actively incorporated into microbial biomass in the water column but that the settling leached t-POM (t-POML) does not enter the food web via sediment bacteria. Consequently, t-POML is either buried in the sediment or introduced into the aquatic food web via microorganisms (bacteria and fungi) directly associated with t-POM(L) and via benthic macroinvertebrates by shredding of t-POM(L). The latter pathway represents a "benthic shortcut" which efficiently transfers t-POM(L) to higher trophic levels.

Phase-specific Geochemistry of Ni: a Tracer of Geosphere-Biosphere Co-evolution?

NASA Astrophysics Data System (ADS)

Ciscato, E. R.; Vance, D.; Bontognali, T. R. R.; Poulton, S.

2016-12-01

Metalloproteome analyses and culturing studies have suggested that trace metals, such as Cu, Fe, Mo, Ni, and Zn, were selectively utilized by different organisms and specific metabolisms throughout the evolution of the biosphere. Methanogens have a particular requirement for Ni and culturing studies have shown that they fractionate Ni isotopes upon uptake. It is not clear, however, whether a resulting Ni isotopic signal can be preserved in the geological record. We have developed a new approach that enables us to analyze phase-specific authigenic trace metal enrichments, and their respective isotopic signatures, in (predominantly organic-rich) sediments from the geological record. An acid digestion step followed by high-pressure ashing allows us to separate an `organic matter + Pyrite' phase from an `HF-extractable' phase. We have applied this approach to investigate the distribution of Ni isotopes in a variety of modern sediments, including organic-rich sediments from upwelling margins and a hypersaline lagoonal setting where methanogenesis is likely to be an active process. Preliminary results on geological record samples show a δ60Ni for the `HF-extractable' phases that agrees with the average continental crust, whereas the `organic matter + Pyrite' phases are heavier and shifted in the direction of modern seawater. By combining this data with our δ60Ni dataset from modern sediments, we investigate the dynamics of Ni cycling in environments with different O2 and H2S availabilities both in the modern and throughout the past 3.2 billion years. Our phase-specific δ60Ni record is of instrumental importance in determining whether a biologically induced fractionation imparted by methanogens is indeed observable, and if it can be used as a biosignature for tracing the predominance of methanogenic pathways throughout the co-evolution of the geosphere and biosphere.

Mycodiversity in marine sediments contaminated by heavy metals: preliminary results

NASA Astrophysics Data System (ADS)

Zotti, Mirca; Carbone, Cristina; Cecchi, Grazia; Consani, Sirio; Cutroneo, Laura; Di Piazza, Simone; Gabutto, Giacomo; Greco, Giuseppe; Vagge, Greta; Capello, Marco

2016-04-01

Fungi represent the main decomposers of woody and herbaceous substrates in the marine ecosystems. To date there is a gap in the knowledge about the global diversity and distribution of fungi in marine habitats. On the basis of their biological diversity and their role in ecosystem processes, marine fungi may be considered one of the most attractive groups of organisms in modern biotechnology, e.g. ecotoxic metal bioaccumulation. Here we report the data about the first mycological survey in the metal contaminated coastal sediments of the Gromolo Bay. The latter is located in Ligurian Sea (Eastern Liguria, Italy) and is characterized by an enrichment of heavy metals due to pollution of Gromolo Torrent by acidic processes that interest Fe-Cu sulphide mine. 24 samples of marine sediments were collected along a linear plot in front of the shoreline in July 2015. Each sample was separated into three aliquot for mineralogical, chemical analyses and fungal characterization. The sediment samples are characterised by clay fractions (illite and chlorite), minerals of ophiolitic rocks (mainly serpentine, pyroxene and plagioclase) and quartz and are enriched some chemical elements of environmental importance (such as Cu, Zn, Pb, Cd, As). For fungal characterisation the sediment samples were inoculated in Petri dishes on different culture media (Malt Extract Agar and Rose Bengal) prepared with sea water and added with antibiotics. The inoculated dishes were incubated at 20°C in the dark for 28 days. Every week fungal growth was monitored counting the number of colonies. Later, the colonies were isolated in axenic culture for further molecular analysis. The mycodiversity evaluate on the basis of Colony Forming Units (CFU) and microfungal-morphotype characterised by macro-and micro-morphology. Until now on the 72 Petri dishes inoculated 112 CFU of filamentous fungi were counted, among these about 50 morphotypes were characterized. The quantitative results show a mean value of 4.6 CFU per gram of sediments. The maximum value of 11 CFU g-1 has been recorded in two stations (off the Sestri Levante Tombolo), while the minimum value has been recorded closer to the coast. As concern qualitative results, the most recurrent genera are Aspergillus and Penicillium. These data confirm the occurrence of a mycobiota in these heavy metal contaminated sediments. Our preliminary results are a first contribution to the knowledge of presence of microfungi in marine sediments, and propel us to increase our research in order to find out new organisms for bioremediation purpose.

Bioaccumulation and trophic transfer of short chain chlorinated paraffins in a marine food web from Liaodong Bay, North China.

PubMed

Ma, Xindong; Zhang, Haijun; Wang, Zhen; Yao, Ziwei; Chen, Jingwen; Chen, Jiping

2014-05-20

Short chain chlorinated paraffins (SCCPs) are under the evaluation for inclusion into the Stockholm Convention on persistent organic pollutants. However, information on their bioconcentration and biomagnification in marine ecosystems is unavailable, limiting the evaluation of their ecological risks. In this study, seawater, sediment, zooplankton, invertebrates, and fishes collected from Liaodong Bay, Bohai Sea, North China were analyzed to investigate the residual level, congener group profile, bioaccumulation, and trophic transfer of SCCPs in a marine food web. The total concentrations of SCCPs ranged from 4.1 to 13.1 ng L(-1) in seawater, 65 to 541 ng g(-1) (dw) in sediment, and 86 to 4400 ng g(-1) (ww) in organisms. Correspondence analysis indicated the relative enrichment of C10Cl5 and C11Cl5 formula groups in most aquatic organisms. Both the logarithm bioaccumulation factors (log BAFs: 4.1-6.7) and biota-sediment accumulation factors (BSAFs: 0.1-7.3) of individual congeners implied the bioaccumulation of SCCPs. The trophic magnification factor (TMF) of ∑SCCPs was determined to be 2.38 in the zooplankton-shrimp-fish food web, indicating biomagnification potential of SCCPs in the marine ecosystem. The TMF values of individual congener groups significantly correlated with their log KOW values.

Establishment of a Polychlorinated Biphenyl-Dechlorinating Microbial Consortium, Specific for Doubly Flanked Chlorines, in a Defined, Sediment-Free Medium

PubMed Central

Wu, Qingzhong; Sowers, Kevin R.; May, Harold D.

2000-01-01

Estuarine sediment from Charleston Harbor, South Carolina, was used as inoculum for the development of an anaerobic enrichment culture that specifically dechlorinates doubly flanked chlorines (i.e., chlorines bound to carbon that are flanked on both sides by other chlorine-carbon bonds) of polychlorinated biphenyls (PCBs). Dechlorination was restricted to the para chlorine in cultures enriched with 10 mM fumarate, 50 ppm (173 μM) 2,3,4,5-tetrachlorobiphenyl, and no sediment. Initially the rate of dechlorination decreased upon the removal of sediment from the medium. However, the dechlorinating activity was sustainable, and following sequential transfer in a defined, sediment-free estuarine medium, the activity increased to levels near that observed with sediment. The culture was nonmethanogenic, and molybdate, ampicillin, chloramphenicol, neomycin, and streptomycin inhibited dechlorination activity; bromoethanesulfonate and vancomycin did not. Addition of 17 PCB congeners indicated that the culture specifically removes double flanked chlorines, preferably in the para position, and does not attack ortho chlorines. This is the first microbial consortium shown to para or meta dechlorinate a PCB congener in a defined sediment-free medium. It is the second PCB-dechlorinating enrichment culture to be sustained in the absence of sediment, but its dechlorinating capabilities are entirely different from those of the other sediment-free PCB-dechlorinating culture, an ortho-dechlorinating consortium, and do not match any previously published Aroclor-dechlorinating patterns. PMID:10618202

Anaerobic Benzene Degradation in Petroleum-Contaminated Aquifer Sediments after Inoculation with a Benzene-Oxidizing Enrichment

PubMed Central

Weiner, Jonathan M.; Lovley, Derek R.

1998-01-01

Sediments from the sulfate-reduction zone of a petroleum-contaminated aquifer, in which benzene persisted, were inoculated with a benzene-oxidizing, sulfate-reducing enrichment from aquatic sediments. Benzene was degraded, with apparent growth of the benzene-degrading population over time. These results suggest that the lack of benzene degradation in the sulfate-reduction zones of some aquifers may result from the failure of the appropriate benzene-degrading sulfate reducers to colonize the aquifers rather than from environmental conditions that are adverse for anaerobic benzene degradation. PMID:9464422

Geochemical analysis of sediments from a semi-enclosed bay (Dongshan Bay, southeast China) to determine the anthropogenic impact and source.

PubMed

Xu, Yonghang; Sun, Qinqin; Ye, Xiang; Yin, Xijie; Li, Dongyi; Wang, Liang; Wang, Aijun; Li, Yunhai

2017-05-01

The geochemical compositions of sediments in the Dongshan Bay, a semi-enclosed bay on the southeast coast of China, were obtained to identify pollutant sources and evaluate the anthropogenic impacts over the last 100 years. The results indicated that the metal flux had been increasing since the 1980s. Enrichment factor values (Pb, Zn and Cu) suggested only slight enrichment. The proportion of anthropogenic Pb changed from 9% to 15% during 2000-2014. Coal combustion might be an important contamination source in the Dongshan Bay. The historical variation in the metal flux reflected the economic development and urbanization in the Zhangjiang drainage area in the past 30 years. According to the Landsat satellite remote sensing data, the urbanization area expanded approximately three times from 1995 to 2010. The δ 13 C values (-21‰ to -23‰) of the organic matter (OM) in the sediments indicated that the OM was primarily sourced from aquatic, terrigenous and marsh C 3 plants. Nitrogen was mainly derived from aquatic plants and terrigenous erosion before the 1980s. However, the total organic carbon (TOC) contents, total nitrogen (TN) contents and δ 15 N had been increasing since the 1980s, which suggested that the sources of nitrogen were soil erosion, fertilizer and sewage. In addition, the TOC and TN fluxes in the Dongshan Bay had significantly increased since the 1980s, which reflected the use of N fertilizer. However, the TOC and TN fluxes significantly decreased in the past decade because environmental awareness increased and environmental protection policies were implemented. Copyright © 2017 Elsevier Ltd. All rights reserved.

Observational and modeling constraints on global anthropogenic enrichment of mercury.

PubMed

Amos, Helen M; Sonke, Jeroen E; Obrist, Daniel; Robins, Nicholas; Hagan, Nicole; Horowitz, Hannah M; Mason, Robert P; Witt, Melanie; Hedgecock, Ian M; Corbitt, Elizabeth S; Sunderland, Elsie M

2015-04-07

Centuries of anthropogenic releases have resulted in a global legacy of mercury (Hg) contamination. Here we use a global model to quantify the impact of uncertainty in Hg atmospheric emissions and cycling on anthropogenic enrichment and discuss implications for future Hg levels. The plausibility of sensitivity simulations is evaluated against multiple independent lines of observation, including natural archives and direct measurements of present-day environmental Hg concentrations. It has been previously reported that pre-industrial enrichment recorded in sediment and peat disagree by more than a factor of 10. We find this difference is largely erroneous and caused by comparing peat and sediment against different reference time periods. After correcting this inconsistency, median enrichment in Hg accumulation since pre-industrial 1760 to 1880 is a factor of 4.3 for peat and 3.0 for sediment. Pre-industrial accumulation in peat and sediment is a factor of ∼ 5 greater than the precolonial era (3000 BC to 1550 AD). Model scenarios that omit atmospheric emissions of Hg from early mining are inconsistent with observational constraints on the present-day atmospheric, oceanic, and soil Hg reservoirs, as well as the magnitude of enrichment in archives. Future reductions in anthropogenic emissions will initiate a decline in atmospheric concentrations within 1 year, but stabilization of subsurface and deep ocean Hg levels requires aggressive controls. These findings are robust to the ranges of uncertainty in past emissions and Hg cycling.

Major, trace and REE geochemistry of recent sediments from lower Catumbela River (Angola)

NASA Astrophysics Data System (ADS)

Vinha, Manuela; Silva, M. G.; Cabral Pinto, Marina M. S.; Carvalho, Paula Cristina S.

2016-03-01

The mineralogy, texture, major, trace and rare earth elements, from recent sediment samples collected in the lower Catumbela River, were analysed in this study to characterize and discuss the factors controlling its geochemistry and provide data that can be used as tracers of Catumbela River inputs to the Angolan continental shelf. The sediments are mainly sands and silty-sands, but sandy-silt also occurs and the mineralogy is composed of quartz, feldspar, phyllosilicates, magnetite, ilmenite and also carbonates when the river crosses limestones and marls in the downstream sector. The hydraulic sorting originates magnetite-ilmenite and REE-enriched minerals placers. The mineralogy of the sediments is controlled by the source rocks and the degree of chemical weathering is lower than erosion. The texture is mainly controlled by location. There is enrichment in all the analysed trace elements in the fine grained, clay minerals and Fe-oxy-hydroxides rich sediments, compared to the coarse grained and quartz plus feldspar rich ones. The coarse grained sediments (without the placers) are impoverished in ΣREE when compared with UCC and NASC compositions, while the fine grained sediments have ΣREE contents similar to UCC and NASC. The placers have ΣREE contents up to 959.59 mg/kg. The source composition is the dominant factor controlling the REE geochemistry of the analysed sediments as there is no difference in the (La/Yb)N, (La/Sm)N and (Gd/Yb)N ratios in coarse and fine grained sediments. The sorting of magnetite, ilmenite, zircon, throrite, thorianite, rutile and titanite explain the HREE/LREE enriched patterns of the coarse grained sediments.

Effects of sediment dredging on nitrogen cycling in Lake Taihu, China: Insight from mass balance based on a 2-year field study.

PubMed

Yu, Juhua; Fan, Chengxin; Zhong, Jicheng; Zhang, Lu; Zhang, Lei; Wang, Changhui; Yao, Xiaolong

2016-02-01

Sediment dredging can permanently remove pollutants from an aquatic ecosystem, which is considered an effective approach to aquatic ecosystem restoration. In this work, a 2-year field simulation test was carried out to investigate the effect of dredging on nitrogen cycling across the sediment-water interface (SWI) in Lake Taihu, China. The results showed that simulated dredging applied to an area rich in total organic carbon (TOC) and total nitrogen (TN) slightly reduced the NH4(+)-N release from sediments while temporarily enhanced the NH4(+)-N release in an area with lower TOC and/or TN (in the first 180 days), although the application had a limited effect on the fluxes of NO2(-)-N and NO3(-)-N in both areas. Further analysis indicated that dredging induced decreases in nitrification, denitrification, and anaerobic ammonium oxidation (anammox) in sediments, notably by 76.9, 49.0, and 89.9%, respectively, in the TOC and/or TN-rich area. Therefore, dredging slowed down nitrogen cycling rates in sediments but did not increase N loading to overlying water. The main reason for the above phenomenon could be attributed to the removal of the surface sediments enriched with more TOC and/or TN (compared with the bottom sediments). Overall, to minimize internal N pollution, dredging may be more applicable to nutrient-rich sediments.

Digital Map of Surficial Geology, Wetlands, and Deepwater Habitats, Coeur d'Alene River Valley, Idaho

USGS Publications Warehouse

Bookstrom, Arthur A.; Box, Stephen E.; Jackson, Berne L.; Brandt, Theodore R.; Derkey, Pamela D.; Munts, Steven R.

1999-01-01

The Coeur d'Alene (CdA) River channel and its floodplain in north Idaho are mostly covered by metal-enriched sediments, partially derived from upstream mining, milling and smelting wastes. Relative to uncontaminated sediments of the region, metal-enriched sediments are highly enriched in silver, lead, zinc, arsenic, antimony and mercury, copper, cadmium, manganese, and iron. Widespread distribution of metal-enriched sediments has resulted from over a century of mining in the CdA mining district (upstream), poor mine-waste containment practices during the first 80 years of mining, and an ongoing series of over-bank floods. Previously deposited metal-enriched sediments continue to be eroded and transported down-valley and onto the floodplain during floods. The centerpiece of this report is a Digital Map Surficial Geology, Wetlands and Deepwater Habitats of the Coeur d'Alene (CdA) River valley (sheets 1 and 2). The map covers the river, its floodplain, and adjacent hills, from the confluence of the North and South Forks of the CdA River to its mouth and delta front on CdA Lake, 43 linear km (26 mi) to the southwest (river distance 58 km or 36 mi). Also included are the following derivative theme maps: 1. Wetland System Map; 2. Wetland Class Map; 3. Wetland Subclass Map; 4. Floodplain Map; 5. Water Regime Map; 6. Sediment-Type Map; 7. Redox Map; 8. pH Map; and 9. Agricultural Land Map. The CdA River is braided and has a cobble-gravel bottom from the confluence to Cataldo Flats, 8 linear km (5 mi) down-valley. Erosional remnants of up to four alluvial terraces are present locally, and all are within the floodplain, as defined by the area flooded in February of 1996. High-water (overflow) channels and partly filled channel scars braid across some alluvial terraces, toward down-valley marshes and (or) oxbow ponds, which drain back to the river. Near Cataldo Flats, the river gradient flattens, and the river coalesces into a single channel with a large friction-dominated central sand bar at Cataldo Landing. Metal-enriched sediments that were dredged from the central sand bar were deposited on Cataldo Flats, to form extensive dredge-spoil deposits. From the central sand bar to CdA Lake, thick deposits of metal-enriched sand partially fill the middle of the pre-mining-era channel along straight reaches, and form point-bars along the inside margins of meander bends. Metal-enriched sand and silt form oxidized bank-wedge deposits along riverside margins of pre-mining-era levees of gray silty mud. Metal-enriched levee sand deposits extend across bank wedges and natural levees, generally thinning and fining away from the river, toward lateral marshes and lakes, where dark gray metal-enriched silt and mud overlie silty peat, deposited before the mining era. Distributary streams and man-made canals locally diverge from the river, connecting it to lateral marshes and lakes, and metal-enriched sand splays locally fan out across the floodplain. At the mouth of the river, a bouyancy-dominated river-mouth bar crests beyond the ends of the emergent levees. Thick delta-front deposits of metal-enriched sand slope from the river-mouth bar to the bottom of CdA Lake.

Seasonal Dynamics of Trace Elements in Tidal Salt Marsh Soils as Affected by the Flow-Sediment Regulation Regime

PubMed Central

Bai, Junhong; Xiao, Rong; Zhao, Qingqing; Lu, Qiongqiong; Wang, Junjing; Reddy, K. Ramesh

2014-01-01

Soil profiles were collected in three salt marshes with different plant species (i.e. Phragmites australis, Tamarix chinensis and Suaeda salsa) in the Yellow River Delta (YRD) of China during three seasons (summer and fall of 2007 and the following spring of 2008) after the flow-sediment regulation regime. Total elemental contents of As, Cd, Cu, Pb and Zn were determined using inductively coupled plasma atomic absorption spectrometry to investigate temporal variations in trace elements in soil profiles of the three salt marshes, assess the enrichment levels and ecological risks of these trace elements in three sampling seasons and identify their influencing factors. Trace elements did not change significantly along soil profiles at each site in each sampling season. The highest value for each sampling site was observed in summer and the lowest one in fall. Soils in both P. australis and S. salsa wetlands tended to have higher trace element levels than those in T. chinensis wetland. Compared to other elements, both Cd and As had higher enrichment factors exceeding moderate enrichment levels. However, the toxic unit (TU) values of these trace elements did not exceed probable effect levels. Correlation analysis showed that these trace elements were closely linked to soil properties such as moisture, sulfur, salinity, soil organic matter, soil texture and pH values. Principal component analysis showed that the sampling season affected by the flow-sediment regulation regime was the dominant factor influencing the distribution patterns of these trace elements in soils, and plant community type was another important factor. The findings of this study could contribute to wetland conservation and management in coastal regions affected by the hydrological engineering. PMID:25216278

Assessment of trace metals contamination level, bioavailability and toxicity in sediments from Dakar coast and Saint Louis estuary in Senegal, West Africa.

PubMed

Diop, Cheikh; Dewaelé, Dorothée; Cazier, Fabrice; Diouf, Amadou; Ouddane, Baghdad

2015-11-01

Trace metals have the potential to associate with sediments that have been recognised as significant source of contamination for the benthic environment. The current study aims assessing the trace metals contamination level in sediments from Dakar coast and Saint Louis estuary, and to examine their bioavailability to predict potential toxicity of sediments. Surface sediment samples were collected between June 2012 and January 2013 in three sampling periods from eight stations. Trace metals were analysed using inductively coupled plasma-optical emission spectrometer. Geoaccumulation indexes (Igeo) showed strong pollution by Cd, Cr, Cu and Pb confirmed by enrichment factor (EF) suggesting that these metals derived from anthropogenic sources. Toxicity indexes exceeded one in several sites suggesting the potential effects on sediment-dwelling organisms, which may constitute a risk to populations' health. However, seasonal variability of metal bioavailability was noted, revealing the best period to monitor metal contamination. From an ecotoxicological point of view, concentrations of Cd, Cr, Cu and Pb were above the effects range low threshold limit of the sediment quality guidelines for adverse biological effects. In addition, with Pb concentrations above the effect range medium values in some sites, biological effects may occur. Copyright © 2014 Elsevier Ltd. All rights reserved.

Sedimentary and pore water geochemistry linked to deglaciation and postglacial development of Lake Vättern, Sweden

NASA Astrophysics Data System (ADS)

Swärd, Henrik; O´Regan, Matt; Kylander, Malin; Greenwood, Sarah; Mörth, Magnus; Jakobsson, Martin

2017-04-01

Lake Vättern, in south central Sweden, underwent profound environmental changes during the Late Weichselian deglaciation of Fennoscandia. It evolved from (i) a sub/proglacial lake situated at the westernmost rim of the Baltic Ice Lake (BIL) into (ii) a brackish to marine phase where the Vättern basin was a part of the Yoldia Sea connecting the North and Baltic Seas, and finally to (iii) a freshwater basin as isostatic rebound following deglaciation led to its isolation. The sedimentary and pore water geochemical signatures associated with these dramatic environmental changes were investigated in a 74 m composite sediment core from southern Lake Vättern. This was accomplished using high-resolution X-ray fluorescence measurements of elemental data along with discrete measurements of total organic carbon (TOC), δ13C, mineralogical composition (XRD) and pore water chemistry. Proglacial sediments in Lake Vättern are devoid of organic matter, and show cyclic trends in elemental data, grain size and mineralogy. These are interpreted as varved sediments whose thickness decreases upcore from decimeters to millimeters. The coarse grained varves are enriched in Ca, Si, Zr and Sr and contain calcite while the fine grained varves are enriched in K, Rb, Ti and Fe and lack calcite. Overall, the presence of calcite is limited to the proglacial sediments and reflected in the elemental data by an abrupt decrease of Ca at the (i)/(ii) transition. This suggests a glacial/glaciofluvial origin for the calcite, likely eroded from local limestones that borders the lake basin in the northeast. The saline incursion at the beginning of phase (ii) is evident in pore water chemistry by a significant increase of the major sea water species (Cl, Na, Mg, K and Ca) but is not clearly seen in the sedimentary geochemistry. Increased biological production in and around the lake during stage (iii) is strongly reflected in sedimentary geochemistry showing decreasing detrital inputs, increasing TOC and δ13C signals and a mineralogical composition that resembles the fine grained varves of the proglacial sediments, but with a more intense quartz signal. Furthermore, pore water profiles show substantial increase in the concentration of redox sensitive species (Fe, Mn and P) indicating anoxic biodegradation in the sediments.

Baseline study on trace and rare earth elements in marine sediments collected along the Namibian coast.

PubMed

Orani, Anna Maria; Vassileva, Emilia; Wysocka, Irena; Angelidis, Michael; Rozmaric, Martina; Louw, Deon

2018-06-01

Namibia is a fast-growing country with extensive mineral extraction activities used in diamond, fluorspar, uranium, and metals production. To assess the impact of land based human activities on the Namibian coastal marine environment, 25 elements were analyzed in 22 surface sediments samples collected along the coast. After applying a variety of pollution assessment indices (Enrichment Factor, Igeo and Pollution Load Indexes) was concluded that As, Cd and Sb were considerably enriched in the sediments from several sites, while Cu, Pb and Zn showed very high enrichment near the Walvis Bay harbor. Pearson's correlation and Principal Component Analysis were used to investigate common metal sources. Additionally, the determination of Pb isotope ratios confirmed the contribution of land based human activities at Walvis Bay and Lüderitz as sources of pollution. The analysis of REEs did not reveal any important enrichment due to anthropogenic activities, but provides a needed baseline for further investigations. Copyright © 2018 Elsevier Ltd. All rights reserved.

Reconciling drainage and receiving basin signatures of the Godavari River system

NASA Astrophysics Data System (ADS)

Ojoshogu Usman, Muhammed; Kirkels, Frédérique Marie Sophie Anne; Zwart, Huub Michel; Basu, Sayak; Ponton, Camilo; Blattmann, Thomas Michael; Ploetze, Michael; Haghipour, Negar; McIntyre, Cameron; Peterse, Francien; Lupker, Maarten; Giosan, Liviu; Eglinton, Timothy Ian

2018-06-01

The modern-day Godavari River transports large amounts of sediment (170 Tg per year) and terrestrial organic carbon (OCterr; 1.5 Tg per year) from peninsular India to the Bay of Bengal. The flux and nature of OCterr is considered to have varied in response to past climate and human forcing. In order to delineate the provenance and nature of organic matter (OM) exported by the fluvial system and establish links to sedimentary records accumulating on its adjacent continental margin, the stable and radiogenic isotopic composition of bulk OC, abundance and distribution of long-chain fatty acids (LCFAs), sedimentological properties (e.g. grain size, mineral surface area, etc.) of fluvial (riverbed and riverbank) sediments and soils from the Godavari basin were analysed and these characteristics were compared to those of a sediment core retrieved from the continental slope depocenter. Results show that river sediments from the upper catchment exhibit higher total organic carbon (TOC) contents than those from the lower part of the basin. The general relationship between TOC and sedimentological parameters (i.e. mineral surface area and grain size) of the sediments suggests that sediment mineralogy, largely driven by provenance, plays an important role in the stabilization of OM during transport along the river axis, and in the preservation of OM exported by the Godavari to the Bay of Bengal. The stable carbon isotopic (δ13C) characteristics of river sediments and soils indicate that the upper mainstream and its tributaries drain catchments exhibiting more 13C enriched carbon than the lower stream, resulting from the regional vegetation gradient and/or net balance between the upper (C4-dominated plants) and lower (C3-dominated plants) catchments. The radiocarbon contents of organic carbon (Δ14COC) in deep soils and eroding riverbanks suggests these are likely sources of old or pre-aged carbon to the Godavari River that increasingly dominates the late Holocene portion of the offshore sedimentary record. While changes in water flow and sediment transport resulting from recent dam construction have drastically impacted the flux, loci, and composition of OC exported from the modern Godavari basin, complicating reconciliation of modern-day river basin geochemistry with that recorded in continental margin sediments, such investigations provide important insights into climatic and anthropogenic controls on OC cycling and burial.

Accumulation of Sellafield-derived radiocarbon ((14)C) in Irish Sea and West of Scotland intertidal shells and sediments.

PubMed

Tierney, Kieran M; Muir, Graham K P; Cook, Gordon T; MacKinnon, Gillian; Howe, John A; Heymans, Johanna J; Xu, Sheng

2016-01-01

The nuclear energy industry produces radioactive waste at various stages of the fuel cycle. In the United Kingdom, spent fuel is reprocessed at the Sellafield facility in Cumbria on the North West coast of England. Waste generated at the site comprises a wide range of radionuclides including radiocarbon ((14)C) which is disposed of in various forms including highly soluble inorganic carbon within the low level liquid radioactive effluent, via pipelines into the Irish Sea. This (14)C is rapidly incorporated into the dissolved inorganic carbon (DIC) reservoir and marine calcifying organisms, e.g. molluscs, readily utilise DIC for shell formation. This study investigated a number of sites located in Irish Sea and West of Scotland intertidal zones. Results indicate (14)C enrichment above ambient background levels in shell material at least as far as Port Appin, 265 km north of Sellafield. Of the commonly found species (blue mussel (Mytilus edulis), common cockle (Cerastoderma edule) and common periwinkle (Littorina littorea)), mussels were found to be the most highly enriched in (14)C due to the surface environment they inhabit and their feeding behaviour. Whole mussel shell activities appear to have been decreasing in response to reduced discharge activities since the early 2000s but in contrast, there is evidence of continuing enrichment of the carbonate sediment component due to in-situ shell erosion, as well as indications of particle transport of fine (14)C-enriched material close to Sellafield. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Biomonitoring for deposited sediment using benthic invertebrates: A test on 4 Missouri streams

USGS Publications Warehouse

Zweig, L.D.; Rabeni, Charles F.

2001-01-01

The response of stream benthic invertebrates to surficially deposited fine sediment was investigated in 4 Missouri streams. Twenty to 24 sampling sites in each stream were selected based on similarities of substrate particle-size distributions, depths, and current velocities but for differences in amounts of deposited sediment, which ranged from 0 to 100% surface cover. Deposited sediment was quantified 2 ways: a visual estimate of % surface cover, and a measurement of substrate embeddedness, which were highly correlated with each other and with the amount of sand. Invertebrates were collected using a kicknet for a specified time in a 1-m2 area. Five commonly used biomonitoring metrics (taxa richness, density, Ephemeroptera, Plecoptera, and Trichoptera [EPT] richness, EPT density, and EPT/Chironomidae richness) were consistently significantly correlated across streams to deposited sediment. Shannon diversity index, Chironomidae richness, Chironomidae density, a biotic index, and % dominant taxon did not relate to increasing levels of deposited sediment. Tolerance values representing taxa responses to deposited sediment were developed for 30 taxa. Deposited-sediment tolerance values were not correlated with biotic index tolerance values, indicating a different response by taxa to deposited sediment than to organic enrichment. Deposited-sediment tolerance values were used to develop the Deposited Sediment Biotic Index (DSBI). The DSBI was calculated for all samples (n = 85) to characterize sediment impairment of the sampled streams. DSBI values for each site were highly correlated with measures of deposited sediment. Model validation by a resampling procedure confirmed that the DSBI is a potentially useful tool for assessing ecological effects of deposited sediment.

Biochemical distributions (amino acids, neutral sugars, and lignin phenols) among size-classes of modern marine sediments from the Washington coast

NASA Astrophysics Data System (ADS)

Keil, Richard G.; Tsamakis, Elizabeth; Giddings, J. Calvin; Hedges, John I.

1998-04-01

In order to examine relationships of organic matter source, composition, and diagenesis with particle size and mineralogy in modern marine depositional regimes, sediments from the continental shelf and slope along the Northwest Pacific rim (Washington coast, USA) were sorted into hydrodynamic size fractions (sand: >250, 63-250 μm; silt: 35-63, 17-35, 8-17, 3-8 μm; and clay-sized: 1-3, 0.5-1, <0.5 μm). The size fractions were then density fractionated to separate distinct organic debris from mineral-associated organic matter, and the various separates were analyzed for their amino acid, aldose, and lignin compositions. The composition of organic matter in the separates changes markedly as a function of particle size and density. Large compositional differences were observed between the clay-sized fractions (dominated mineralogically by smectites), the sand-sized mineral-associated isolates (quartz-rich), and floated coarse organic matter (dominated by vascular plant debris). Organic matter intimately associated with the clay-sized fractions shows the most extensive diagenetic alteration, as reflected in high abundances of nonprotein amino acids (especially β-alanine), elevated lignin phenol acid/aldehyde ratios, and high relative concentrations of the deoxyhexoses fucose and rhamnose. Organic matter in the silt fractions, though degraded, is not as diagenetically altered as in the clay fractions. Enrichment of pollen grains in the silt-size material is reflected by high cinnamic acid to ferulic acid lignin phenol ratios. The highest pollen biochemical signal is observed in the silt fractions of the deepest station (1835 m), where pollen abundances are also highest. Organic matter tightly bound in the silt and sand-sized fractions are enriched in aldoses and show indications of enhanced microbial biomass as reflected by high weight percentages of ribose. Distinct organic debris was composed of relatively unaltered vascular plant remains as reflected by high lignin phenol yields and low acid/aldehyde ratios. Clay-size fractions are enriched in nitrogenous components, as reflected by elevated yields of total and basic amino acids (especially lysine). Silt- and sand-size fractions rich in quartz and albite show slightly higher yields of neutral amino acids. Consistent trends across all size classes and among the different depositional settings illustrates that only a small portion of the organic matter is present as distinct organic debris (e.g. pollen, vascular plant tissues, etc.), but that this debris can be isolated in specific size classes. The data for surface-associated organic matter are consistent with, but not conclusive of, selective partitioning of some organic matter to specific mineral surfaces. The dominant size class-specific trends in organic matter composition are due to changes in both source and diagenetic alteration.

Marine nutrient contributions to tidal creeks in Virginia: spawning marine fish as nutrient vectors to freshwater ecosystems

NASA Astrophysics Data System (ADS)

Macavoy, S. E.; Garman, G. C.

2006-12-01

Coastal freshwater streams are typically viewed as conduits for the transport of sediment and nutrients to the coasts. Some coastal streams however experience seasonal migrations of anadromous fish returning to the freshwater to spawn. The fish may be vectors for the delivery of marine nutrients to nutrient poor freshwater in the form of excreted waste and post-spawning carcasses. Nutrients derived from marine sources are 13C, 15N and 34S enriched relative to nutrients in freshwater. Here we examine sediment, particulate organic matter (POM), invertebrates and fish in two tidal freshwater tributaries of the James River USA. The d15N of POM became elevated (from 3.8 to 6.5%), coincident with the arrival of anadromous river herring (Alosa sp), indicating a pulse of marine nitrogen. However, the elevated 15N was not observed in sediment samples or among invertebrates, which did not experience a seasonal isotopic shift (there were significant differences however among the guilds of invertebrate). Anadromous Alosa aestivalis captured within the tidal freshwater were 13C and 34S enriched (-19.3 and 17.2%, respectively) relative to resident freshwater fishes (-26.4 and 3.6% respectively) captured within 2 weeks of the Alosa. Although it is likely that marine derived nitrogen was detected in the tidal freshwater, it was not in sufficient abundance to change the isotope signature of most ecosystem components.

Heavy metals and organic carbon in sediments from the Tuy River basin, Venezuela.

PubMed

Mogollón, J L; Ramirez, A J; Guillén, R B; Bifano, C

1990-12-01

The Tuy River basin, located in north-central Venezuela with an annual average temperature of 27°C and precipitation of 140 cm, was selected to conduct a geochemical study of bottom sediments, with the object of establishing the natural and human influences in the abundance and distribution of Fe, Mn, Cr, Co, Cu, Ni, Pb, Zn and organic carbon. The basin is lithologically divided into two sub-basins, north and south. The north sub-basin drains a iow-grade metasedimentary terrain with a population density of 800 persons km(-2) and approximateiy 600 industrial sites, while the south sub-basin in underlain by metavolcanic and ultramafic rocks, with a population density of less than 10 persons km(-2).Stream bottom sediment samples (150) were collected during the years of 1979-1986 in 16 unpolluted sites and 13 polluted sites. The sediments were air dried at room temperature and sieved through a 120 stainless steel mesh (125 μm). Samples of grain size smaller than 125 μm were analysed, the heavy metals being determined by atomic absorption spectrometry and the organic carbon (Corg) by dry combustion.The higher concentrations of heavy metals and organic carbon found in the pristine areas were in the south sub-basin, especially in those areas with higher annual precipitation and tropical forest. This indicated that the metavolcanic and ultramafic rocks yield higher concentrations of heavy metals than the metasedimentary rocks. It was also noted that the higher concentrations of Cr and Ni are associated with the ultramafic rocks. The results obtained from the sediment samples collected in the polluted sites showed that the elements Pb, Zn and Corg are enriched up to 4 times as a result of ail the human activities taking place in the basin. Organic carbon is an excellent indicator of domestic wastewater, Pb and Zn are good indicators of the automotive traffic and industrial effluents. The concentrations of each heavy metal did not show any significant correlation with grain size fractions; however, the concentration of organic carbon did show a negative correlation with grain size. The lithological, climatic and vegetation influence in the abundance of heavy metals and organic carbon in stream sediments clearly indicates the necessity of establishing background levels for the area under study when carrying out studies in environmental geochemistry.

Geochemical distribution, fractionation and contamination assessment of heavy metals in marine sediments of the Asaluyeh port, Persian Gulf.

PubMed

Delshab, Hossein; Farshchi, Parvin; Keshavarzi, Behnam

2017-02-15

In this study, total concentration and speciation of heavy metals in sediments of the Asaluyeh, one of the Iran's largest commercial ports, are investigated. 48 sediment samples were collected and analyzed for trace and major elements. Sediment quality guidelines along with calculated enrichment factors and trace metal profiles indicate that Asaluyeh port is threated by contamination, especially with respect to Hg and Cu. Normalization to Sc indicated high enrichment factors in the sediments following the decreasing order of: Hg>Cu>As>Ni>Zn>Pb≈Cr≈Mn>Co≈V≈Fe≈Al. Hg displayed the greatest potential ecological risk factor among sampling stations. The results of sequential extraction procedure revealed that in some stations >50% of Mn, V, Cu and Zn occur in potentially mobile phases and therefore are more readily mobilized in the sediments of the study area. Copyright © 2016 Elsevier Ltd. All rights reserved.

Transport mechanisms of soil-bound mercury in the erosion process during rainfall-runoff events.

PubMed

Zheng, Yi; Luo, Xiaolin; Zhang, Wei; Wu, Xin; Zhang, Juan; Han, Feng

2016-08-01

Soil contamination by mercury (Hg) is a global environmental issue. In watersheds with a significant soil Hg storage, soil erosion during rainfall-runoff events can result in nonpoint source (NPS) Hg pollution and therefore, can extend its environmental risk from soils to aquatic ecosystems. Nonetheless, transport mechanisms of soil-bound Hg in the erosion process have not been explored directly, and how different fractions of soil organic matter (SOM) impact transport is not fully understood. This study investigated transport mechanisms based on rainfall-runoff simulation experiments. The experiments simulated high-intensity and long-duration rainfall conditions, which can produce significant soil erosion and NPS pollution. The enrichment ratio (ER) of total mercury (THg) was the key variable in exploring the mechanisms. The main study findings include the following: First, the ER-sediment flux relationship for Hg depends on soil composition, and no uniform ER-sediment flux function exists for different soils. Second, depending on soil composition, significantly more Hg could be released from a less polluted soil in the early stage of large rainfall events. Third, the heavy fraction of SOM (i.e., the remnant organic matter coating on mineral particles) has a dominant influence on the enrichment behavior and transport mechanisms of Hg, while clay mineral content exhibits a significant, but indirect, influence. The study results imply that it is critical to quantify the SOM composition in addition to total organic carbon (TOC) for different soils in the watershed to adequately model the NPS pollution of Hg and spatially prioritize management actions in a heterogeneous watershed. Copyright © 2016 Elsevier Ltd. All rights reserved.

Preliminary study of sources and processes of enrichment of manganese in water from University of Rhode Island supply wells

USGS Publications Warehouse

Silvey, William Dudley; Johnston, Herbert E.

1977-01-01

Concentrations of dissolved manganese have increased from 0.0 to as much as 3.3 mg/liter over a period of years in closely spaced University of Rhode Island supply wells. The wells tap stratified glacial deposits and derive part of their water from infiltration from a nearby river-pond system. The principal sources of the manganese seem to be coatings of oxides and other forms of manganese on granular aquifer materials and organic-rich sediments on the bottom of the pond and river. Chemical analyses of water from an observation well screened from 3 to 5 feet below the pond bottom indicate that infiltration of water through organic-rich sediments on the pond bottom is the likely cause of manganese enrichment in the well supplies. After passing through the organic layer, the water contains concentrations of manganese as high as 1.2 mg/liter. Manganese in water in concentrations that do not cause unpleasant taste is not regarded to be toxicologically significant. However, concentrations in excess of a few tenths of a milligram per liter are undesirable in public supplies and in many industrial supplies. Brown and others (21970) note that waters containing manganese in concentrations less than 0.1 mg/liter seldom prove troublesome, but that those containing more than 0.5 mg/liter may form objectionable deposits on cooked food, laundry, and plumbing fixtures. The U.S. Public health Service (1962) recommends that the concentrations of manganese in drinking and culinary water not exceed 0.05 mg/liter. (Woodard-USGS)

Geochemical evidence of chemical and physical weathering of mine waste downriver from the New Idria Mercury Mine, San Benito County, California

NASA Astrophysics Data System (ADS)

Sharma, R. K.; Weinman, B.

2014-12-01

Soil, river bank, and sediment samples were collected from Panoache Creek's mine tailings and its drainages in the Mendota Pool area of California's Central Valley. The samples were collected in order to understand the transport mechanisms of mercury and other heavy metals from the abandoned New Idria Mercury Mine (NIMM) in San Banito County, CA. It is generally thought that materials weathered from the NIMM site flow down gradient into the San Carlos Creek, which then joins Silver Creek and Panoche Creek, before finally ending up in the Valley's Mendota pool and San Joaquin River (SJR). While we know that factors like geology, anthropogenic activities, and weathering can accelerate heavy metal accumulation at downgradient reaches (Chakravarty and Patgiri, 2009), it is unclear how this part of the SJR has responded to the mine's abandonment since the 1970s. To investigate how mercury and other heavy metals are weathering and being transported through this portion of the SJR drainage, gains and losses using "enrichment factors" (EF) were calculated and compared along a gradient downstream. Overall, EF of fine and bank sediments show Hg is being enriched and stored within bank sediments. For example, Hg in banks sediments are up to 5% enriched compared to the bed sediments. There is also an enrichment gain trending downstream, as sediments settling in the Mendota pool have comparatively higher EF for Hg (0.94 ppm to 6.91 ppm) relative to background concentrations. Along with other geochemical indices, which can be used to more highly resolve exactly how mine contaminants like Hg are chemically and physically being weathered, (i.e., Igeo, PLI, and CIA) the overall enrichment trend is interpreted to be the physical transport of erosion material during runoff events from the stream banks of SJR tributaries. This interpretation is also supported by depleted Sr and enriched Rb/Sr ratios, which further support physical transport as a dominating factor in contaminant enrichment along the banks of the catchment area. Combined with general trends of increasing Igeo, PLI values, and generally low CIA indices, results support Hg weathering predominantly being controlled by a combination of physical weathering, anthropogenic activities, and bank erosion, that lead to Hg mobilization and transport to downstream areas.

Concurrent Effects of Sediment Accretion and Nutrient Availability on the Clonal Growth Strategy of Carex brevicuspis-A Wetland Sedge That Produces Both Spreading and Clumping Ramets

PubMed Central

Chen, Xinsheng; Liao, Yulin; Xie, Yonghong; Li, Feng; Deng, Zhengmiao; Hou, Zhiyong; Wu, Chao

2017-01-01

Clonal plants producing both clumping and spreading ramets can adjust their growth forms in response to resource heterogeneity or environmental stress. They might produce clumping ramets to retain favorable patches, or produce spreading ramets to escape from stress-affected patches. This study aimed to investigate the rarely reported concurrent effects of sediment accretion and nutrient enrichment, which often occur simultaneously in lacustrine wetlands, on the vegetative propagation and clonal growth forms of Carex brevicuspis C.B. Clarke by conducting a factorial experiment of sediment burial and nutrient addition. Biomass accumulation, new ramet and rhizome numbers, and ramet length of C. brevicuspis were not affected at moderate burial, but were significantly lower after deep burial. Similarly, nutrient enrichment increased the growth and vegetative propagation of C. brevicuspis up to moderate sediment burial, but not after deep burial. Sediment accretion increased the proportion of spreading ramets produced by C. brevicuspis, whereas nutrient addition had no effect on the clonal growth forms. Our results indicated that the plasticity of clonal growth forms is an effective strategy used by plants to acclimate to moderate sediment accretion. Nutrient enrichment did not influence the clonal growth forms of C. brevicuspis and could not facilitate its acclimation to heavy sedimentation condition. PMID:29021805

Geochemistry of the suspended sediment in the estuaries of the Mandovi and Zuari rivers, central west coast of India.

PubMed

Kessarkar, Pratima M; Shynu, R; Rao, V Purnachandra; Chong, Feng; Narvekar, Tanuja; Zhang, Jing

2013-05-01

The geochemistry of the suspended particulate matter (SPM) collected during the monsoon was determined to identify the sources of SPM and to understand the physicochemical processes in the Mandovi and Zuari river estuaries. The concentrations of SPM decrease seaward in both estuaries, but are relatively high at bay stations. Kaolinite is the most dominant clay mineral in the upstream of both rivers. Smectite increases seaward in both estuaries and is abundant in the bay. Upstream stations of Mandovi, where ore deposits are stored on the shore, exhibit high Fe, Mn, total rare earth elements (∑REE), and middle REE- and heavy REE-enriched patterns. Channel stations of both estuaries exhibit middle REE- and light REE-enriched patterns, which gradually changed seaward to middle REE- and heavy REE-enriched patterns. Canal stations exhibit the highest concentrations of major and trace metals. High metal/Al ratios occur at stations in the upstream of Zuari and at the confluence of canals in the Mandovi estuary. Enrichment factors of metals indicate that Mn is significantly polluted while other metals are moderately polluted. The δ(13)C and δ(15)N of organic matter indicate that the terrigenous organic matter at the upstream is diluted seaward by marine organic matter. Organic matter at bay stations is largely marine and altered-type. The compositions of SPM are controlled by the particulates from ore dust, the geology of the drainage basins, and the physicochemical processes in the estuaries. Particulates resuspended from the bay are dominated by ore dust, which are advected into the channels of both estuaries during the lull periods of the monsoon.

D/H Ratios of Marine Lipids from Santa Barbara Basin Sediments

NASA Astrophysics Data System (ADS)

Li, C.; Sessions, A.; Kinnaman, F.; Valentine, D.

2006-12-01

With the early successful application of compound-specific D/H analyses to reconstructing paleoclimate records, most subsequent research has focused on understanding organic D/H fractionations in terrestrial environments. Thus we still know very little about natural D/H variations in lipids derived from marine organisms, or indeed if any such variations exist. We have therefore conducted an extensive survey of lipid δD values in two sediment cores collected in the Santa Barbara Basin. These data allow us to examine 1) variations between the lipid products of different organisms, 2) down-core variations due to diagenesis, and 3) differences between sediments deposited under oxic or anoxic bottom-water conditions. Our results show that considerable D/H variability between different marine products does exist. δD values of n-alkanes (except n-C35) ranged from -94 to -175 ‰, and exhibit a systematic offset between odd and even carbon numbers. The δD value of n-C35 is anomalous at -220‰. Isotopic compositions of n-alkanols range from -126 to -221 , with a pattern of progressive D depletion with chain length observed for free alcohols. δD values of sterols range from -215 to -309‰, and show no systematic variation with carbon number. However, offsets do exist between the saturated, monounsaturated, and diunsaturated sterols. Sterols as a group are strongly depleted in D relative to the bacterial-derived hopanols (-166 to -232‰), suggesting possible differences in biosynthetic fractionations by bacteria and eukaryotes. Phytol and phytane δD values roughly ranged from -360 to -410‰, while phytanol was systematically enriched at -300 to -340‰. Fatty acids encompassed much greater variability, with dD values ranging from -55 to -270‰. In general, saturated fatty acids are enriched in D relative to their unsaturated analogs, and long-chain (>C24) acids are enriched in D relative to short-chain (

Enrichment and geo-accumulation of heavy metals and risk assessment of sediments of the Kurang Nallah--feeding tributary of the Rawal Lake Reservoir, Pakistan.

PubMed

Zahra, Azmat; Hashmi, Muhammad Zaffar; Malik, Riffat Naseem; Ahmed, Zulkifl

2014-02-01

Heavy metal concentrations in sediments of the Kurang stream: a principal feeding tributary of the Rawal Lake Reservoir were investigated using enrichment factor (EF), geoaccumulation index (Igeo) and metal pollution index (MPI) to determine metal accumulation, distribution and its pollution status. Sediment samples were collected from twenty one sites during two year monitoring in pre- and post-monsoon seasons (2007-2008). Heavy metal toxicity risk was assessed using Sediment Quality Guidelines (SQGs), effect range low/effect range median values (ERL/ERM), and threshold effect level/probable effect level (TEL/PEL). Greater mean concentrations of Ni, Mn and Pb were recorded in post-monsoon season whereas metal accumulation pattern in pre-monsoon season followed the order: Zn>Mn>Ni>Cr>Co>Cd>Pb>Cu>Li. Enrichment factor (EF) and geoaccumulation (Igeo) values showed that sediments were loaded with Cd, Zn, Ni and Mn. Comparison with uncontaminated background values showed higher concentrations of Cd, Zn and Ni than respective average shale values. Concentrations of Ni and Zn were above ERL values; however, Ni concentration exceeded the ERM values. Sediment contamination was attributed to anthropogenic and natural processes. The results can be used for effective management of fresh water hilly streams of Pakistan. © 2013.

Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments.

PubMed

Muziasari, Windi I; Pärnänen, Katariina; Johnson, Timothy A; Lyra, Christina; Karkman, Antti; Stedtfeld, Robert D; Tamminen, Manu; Tiedje, James M; Virta, Marko

2016-04-01

Antibiotics are commonly used in aquaculture and they can change the environmental resistome by increasing antibiotic resistance genes (ARGs). Sediment samples were collected from two fish farms located in the Northern Baltic Sea, Finland, and from a site outside the farms (control). The sediment resistome was assessed by using a highly parallel qPCR array containing 295 primer sets to detect ARGs, mobile genetic elements and the 16S rRNA gene. The fish farm resistomes were enriched in transposon and integron associated genes and in ARGs encoding resistance to antibiotics which had been used to treat fish at the farms. Aminoglycoside resistance genes were also enriched in the farm sediments despite the farms not having used aminoglycosides. In contrast, the total relative abundance values of ARGs were higher in the control sediment resistome and they were mainly genes encoding efflux pumps followed by beta-lactam resistance genes, which are found intrinsically in many bacteria. This suggests that there is a natural Baltic sediment resistome. The resistome associated with fish farms can be from native ARGs enriched by antibiotic use at the farms and/or from ARGs and mobile elements that have been introduced by fish farming. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Stable Carbon Isotope Fractionation during Bacterial Acetylene Fermentation: Potential for Life Detection in Hydrocarbon-Rich Volatiles of Icy Planet(oid)s.

PubMed

Miller, Laurence G; Baesman, Shaun M; Oremland, Ronald S

2015-11-01

We report the first study of stable carbon isotope fractionation during microbial fermentation of acetylene (C2H2) in sediments, sediment enrichments, and bacterial cultures. Kinetic isotope effects (KIEs) averaged 3.7 ± 0.5‰ for slurries prepared with sediment collected at an intertidal mudflat in San Francisco Bay and 2.7 ± 0.2‰ for a pure culture of Pelobacter sp. isolated from these sediments. A similar KIE of 1.8 ± 0.7‰ was obtained for methanogenic enrichments derived from sediment collected at freshwater Searsville Lake, California. However, C2H2 uptake by a highly enriched mixed culture (strain SV7) obtained from Searsville Lake sediments resulted in a larger KIE of 9.0 ± 0.7‰. These are modest KIEs when compared with fractionation observed during oxidation of C1 compounds such as methane and methyl halides but are comparable to results obtained with other C2 compounds. These observations may be useful in distinguishing biologically active processes operating at distant locales in the Solar System where C2H2 is present. These locales include the surface of Saturn's largest moon Titan and the vaporous water- and hydrocarbon-rich jets emanating from Enceladus. Acetylene-Fermentation-Isotope fractionation-Enceladus-Life detection.

Occurrence and distribution of Polycyclic aromatic hydrocarbons (PAHs) in seawater, sediments and corals from Hainan Island, China.

PubMed

Xiang, Nan; Jiang, Chunxia; Yang, Tinghan; Li, Ping; Wang, Haihua; Xie, Yanli; Li, Sennan; Zhou, Hailong; Diao, Xiaoping

2018-05-15

The levels of 16 US EPA priority polycyclic aromatic hydrocarbons (PAHs) were investigated in corals, ambient seawater and sediments of Hainan Island, China, using gas chromatography - mass spectrometry (GC-MS). The total PAHs (∑PAHs) concentrations ranged from 273.79 to 407.82ng/L in seawater. Besides, the concentrations of ∑PAHs in corals 333.88-727.03ng/g dw) were markedly (P < 0.05) higher than ambient sediments 67.29-196.99ng/g dw), demonstrating the bioaccumulation ability of PAHs by corals. The highest concentration of ∑PAHs was detected at site S2 in Pavona decussate, which also bore the highest ∑PAHs levels in both seawater and sediments. The massive corals were more enriched with PAHs than the branching corals. Although 2 and 3-ring PAHs were predominant and accounted for 69.27-80.46% of the ∑PAHs in corals and ambient environment, the levels of high molecular weight (HMW) PAHs (4-6 ring) in corals also demonstrated their potential dangers for corals and organisms around coral reefs. Biota-sediment accumulation factor (BSAF) refers to an index of the pollutant absorbed by aquatic organisms from the surrounding sediments. The poor correlation between log BSAF and log K ow (hydrophobicity) indicated that PAHs in corals maybe not bioaccumulate from the ambient sediments but through pathways like absorbing from seawater, symbiosis, and feeding. Based on our data, long-term ecological monitoring in typical coral reef ecosystems combined with ecotoxicological tests of PAHs on corals is necessary to determine the impacts of PAHs on coral reefs. Copyright © 2018 Elsevier Inc. All rights reserved.

Historic impact of watershed change and sedimentation to reefs along west-central Guam

NASA Astrophysics Data System (ADS)

Prouty, Nancy G.; Storlazzi, Curt D.; McCutcheon, Amanda L.; Jenson, John W.

2014-09-01

Using coral growth parameters (extension, density, calcification rates, and luminescence) and geochemical measurements (barium to calcium rations; Ba/Ca) from coral cores collected in west-central Guam, we provide a historic perspective on sediment input to coral reefs adjacent to the Piti-Asan watershed. The months of August through December are dominated by increased coral Ba/Ca values, corresponding to the rainy season. With river water enriched in barium related to nearshore seawater, coral Ba/Ca ratios are presented as a proxy for input of fine-grained terrigenous sediment to the nearshore environment. The century-long Ba/Ca coral record indicates that the Asan fore reef is within the zone of impact from discharged sediments transported from the Piti-Asan watershed and has experienced increased terrestrial sedimentation since the 1940s. This abrupt shift in sedimentation occurred at the same time as both the sudden denudation of the landscape by military ordinance and the immediate subsequent development of the Asan area through the end of the war, from 1944 through 1945. In response to rapid input of sediment, as determined from coral Ba/Ca values, coral growth rates were reduced for almost two decades, while calcification rates recovered much more quickly. Furthermore, coral luminescence is decoupled from the Ba/Ca record, which is consistent with degradation of soil organic matter through disturbance by forest fires, suggesting a potential index of fire history and degradation of soil organic matter. These patterns were not seen in the cores from nearby reefs associated with watersheds that have not undergone the same degree of landscape denudation. Taken together, these records provide a valuable tool for understanding the compounding effects of land-use change on coral reef health.

Historic impact of watershed change and sedimentation to reefs along west-central Guam

USGS Publications Warehouse

Prouty, Nancy G.; Storlazzi, Curt D.; McCutcheon, Amanda L.; Jenson, John W.

2014-01-01

Using coral growth parameters (extension, density, calcification rates, and luminescence) and geochemical measurements (barium to calcium rations; Ba/Ca) from coral cores collected in west-central Guam, we provide a historic perspective on sediment input to coral reefs adjacent to the Piti-Asan watershed. The months of August through December are dominated by increased coral Ba/Ca values, corresponding to the rainy season. With river water enriched in barium related to nearshore seawater, coral Ba/Ca ratios are presented as a proxy for input of fine-grained terrigenous sediment to the nearshore environment. The century-long Ba/Ca coral record indicates that the Asan fore reef is within the zone of impact from discharged sediments transported from the Piti-Asan watershed and has experienced increased terrestrial sedimentation since the 1940s. This abrupt shift in sedimentation occurred at the same time as both the sudden denudation of the landscape by military ordinance and the immediate subsequent development of the Asan area through the end of the war, from 1944 through 1945. In response to rapid input of sediment, as determined from coral Ba/Ca values, coral growth rates were reduced for almost two decades, while calcification rates recovered much more quickly. Furthermore, coral luminescence is decoupled from the Ba/Ca record, which is consistent with degradation of soil organic matter through disturbance by forest fires, suggesting a potential index of fire history and degradation of soil organic matter. These patterns were not seen in the cores from nearby reefs associated with watersheds that have not undergone the same degree of landscape denudation. Taken together, these records provide a valuable tool for understanding the compounding effects of land-use change on coral reef health.

Long-term variations in sediment heavy metals of a reservoir with changing trophic states: Implications for the impact of climate change.

PubMed

Wu, Qiong; Qi, Jun; Xia, Xinghui

2017-12-31

Two dated sediment cores from the Miyun Reservoir of Beijing in China were analyzed to reconstruct the pollution history of heavy metals including cadmium (Cd), chromium (Cr), iron (Fe), nickel (Ni), and zinc (Zn) as well as phosphorus (P). Enrichment factor (EF) and geoaccumulation index (I geo ) were applied to assess the enrichment status of heavy metals. Average EF and I geo values indicated that the studied heavy metals in the sediments mainly originated from non-point source pollution and soil-water erosion, showing low ecological risks. In addition, correlation analysis and principal component analysis (PCA) identified that Cd, Zn, and P were mainly from agricultural diffusion pollution caused by utilization of the phosphate fertilizer; Zn, Ni, and Cr originated from soil erosion. PCA analysis was further conducted to investigate the relationships among meteorological factors, algae-dominant total organic carbon (TOC), and heavy metals. Results showed that algae-dominant TOC had strong positive correlation with temperature, which can be explained by that increased temperature accelerated the growth of algae. Meanwhile the opposite loadings between algae-dominant TOC and heavy metal suggested that primary production played an important role in migration and transformation of metals. Moreover, stepwise multiple regression models showed that Fe was sensitive to temperature, which accounted for approximately 39.0% and 40.1% of the variations in Fe of two sediment cores, respectively. Fe showed significant decreasing trends during the past 50years. Reductive environment of water-sediment interface caused by increasing temperature probably contributed to the restoration of ferric iron, resulting in the release of soluble Fe to overlying waters. Future climate change with elevated temperature and extreme weather events will aggravate the ecological risk of heavy metals in water environment due to the enhanced leaching effect and non-point source pollution as well as the release of heavy metals from sediments to water environment. Copyright © 2017. Published by Elsevier B.V.

Sediment quality assessment in a coastal lagoon (Ravenna, NE Italy) based on SEM-AVS and sequential extraction procedure.

PubMed

Pignotti, Emanuela; Guerra, Roberta; Covelli, Stefano; Fabbri, Elena; Dinelli, Enrico

2018-09-01

Sediments from the Pialassa Piomboni coastal lagoon (NE Italy) were studied to assess the degree of contamination and ecological risk related to trace metals by combining a geochemical characterization of bulk sediments with the assessment of the bioavailable forms of trace metals. With this purpose, sediment contamination (Cd, Cu, Hg, Ni, Pb, and Zn) was assessed by Enrichment Factors (EFs), and potential bioavailability by the Simultaneously Extracted Metals and Acid Volatile Sulfides (SEM-AVS) approach (Cd, Cu, Ni, Pb, and Zn), and by Sequential Extraction Procedure (Co, Cr, Cu, Ni, Pb, and Zn). On average, Cr and Ni exhibited no contamination (EF ≤1.5), and a predominance in the residual fraction of the sediment, indicating natural origin for these metals. Cu, Pb and Zn displayed a local contamination, which resulted in a higher proportion of Cu bound to the reducible and oxidizable fractions (~30% and ~40% as median, respectively), and Pb mostly associated with the reducible phase (~60% as median). Hence, Cu and Pb could be mobilized when environmental conditions become reducing or oxidizing. Zn resulted mainly partitioned into the reducible and residual fractions (~50% as median, in both fractions). The Risk Assessment Code (RAC) indicated that approximately 30% of samples had >10% of total Zn weakly bound to the sediment, suggesting a medium risk of exposure for aquatic organisms. RAC results were consistent with the ∑SEM-AVS findings, pointing to possible adverse effects for aquatic biota in ~30% of samples, with Zn mostly accounting for the total metal bioavailability. Hg showed a moderate to very severe enrichment, indicating that a substantial amount of this metal derives from anthropogenic sources and may pose adverse effects on the aquatic biota of the Pialassa Piomboni lagoon. Copyright © 2018 Elsevier B.V. All rights reserved.

Effects of changes in nutrient loading and composition on hypoxia dynamics and internal nutrient cycling of a stratified coastal lagoon

NASA Astrophysics Data System (ADS)

Zhu, Yafei; McCowan, Andrew; Cook, Perran L. M.

2017-10-01

The effects of changes in catchment nutrient loading and composition on the phytoplankton dynamics, development of hypoxia and internal nutrient dynamics in a stratified coastal lagoon system (the Gippsland Lakes) were investigated using a 3-D coupled hydrodynamic biogeochemical water quality model. The study showed that primary production was equally sensitive to changed dissolved inorganic and particulate organic nitrogen loads, highlighting the need for a better understanding of particulate organic matter bioavailability. Stratification and sediment carbon enrichment were the main drivers for the hypoxia and subsequent sediment phosphorus release in Lake King. High primary production stimulated by large nitrogen loading brought on by a winter flood contributed almost all the sediment carbon deposition (as opposed to catchment loads), which was ultimately responsible for summer bottom-water hypoxia. Interestingly, internal recycling of phosphorus was more sensitive to changed nitrogen loads than total phosphorus loads, highlighting the potential importance of nitrogen loads exerting a control over systems that become phosphorus limited (such as during summer nitrogen-fixing blooms of cyanobacteria). Therefore, the current study highlighted the need to reduce both total nitrogen and total phosphorus for water quality improvement in estuarine systems.

The impact of urban expansion and agricultural legacies on trace metal accumulation in fluvial and lacustrine sediments of the lower Chesapeake Bay basin, USA.

PubMed

Coxon, T M; Odhiambo, B K; Giancarlo, L C

2016-10-15

The progressively declining ecological condition of the Chesapeake Bay is attributed to the influx of contaminants associated with sediment loads supplied by its largest tributaries. The continued urban expansion in the suburbs of Virginia cities, modern agricultural activities in the Shenandoah Valley, the anthropogenic and climate driven changes in fluvial system hydrodynamics and their potential associated impacts on trace metals enrichment in the bay's tributaries necessitate constant environmental monitoring of these important water bodies. Eight (210)Pb and (137)Cs dated sediment cores and seventy two sediment grab samples were used to analyze the spatial and temporal distributions of Al, Ca, Mg, Cr, Cd, As, Se, Pb, Cu, Zn, Mn, and Fe in the waterways of the Virginia portion of the Chesapeake Bay basin. The sediment cores for trace metal historical fluctuation analysis were obtained in lower fluvial-estuarine environments and reservoirs in the upper reaches of the basin. The trace metal profiles revealed high basal enrichment factors (EF) of between 0.05 and 40.24, which are interpreted to represent early nineteenth century agricultural activity and primary resource extraction. Surficial enrichment factors on both cores and surface grab samples ranged from 0.01 (Cu) to 1421 (Cd), with Pb, Cu, Zn, and Cd enrichments a plausible consequence of modern urban expansion and industrial development along major transportation corridors. Contemporary surficial enrichments of As, Se, and Cr also ranged between 0 and 137, with the higher values likely influenced by lithological and atmospheric sources. Pearson correlation analyses suggest mining and agricultural legacies, coupled with aerosol deposition, are responsible for high metal concentrations in western lakes and headwater reaches of fluvial systems, while metal accumulation in estuarine reaches of the major rivers can be attributed to urban effluence and the remobilization of legacy sediments. Copyright © 2016 Elsevier B.V. All rights reserved.

Trace metal partitioning in Thalassia testudinum and sediments in the Lower Laguna Madre, Texas.

PubMed

Whelan, Thomas; Espinoza, Jorge; Villarreal, Xiomara; Cottagoma, Maria

2005-01-01

Seagrass communities dominate the Laguna Madre, which accounts for 25% of the coastal region of Texas. Seagrasses are essential to the health of the Laguna Madre (LM) and have experienced an overall decline in coverage in the Lower Laguna Madre (LLM) since 1967. Little is known on the existing environmental status of the LLM. This study focuses on the trace metal chemistry of four micronutrient metals, Fe, Mn, Cu, and Zn, and two non-essential metals, Pb and As, in the globally important seagrass Thalassia testudinum. Seasonal trends show that concentrations of most essential trace metals increase in the tissue during the summer months. With the exception of (1) Cu in the vertical shoot and root, and (2) Mn in the roots, no significant positive correlation exists between the rhizosphere sediment and T. testudinum tissue. Iron indicates a negative correlation between the morphological units and the rhizosphere sediments. No other significant relationship was found between the sediments and the T. testudinum tissue. Mn was enriched up to 10-fold in the leaf tissue relative to the other morphological units and also enriched relative to the rhizosphere sediments. Both Cu and Mn appear to be enriched in leaf tissue compared to other morphological units and also enriched relative to the Cu and Mn in the rhizoshpere sediments. Sediments cores taken in barren areas were slightly elevated in Zn relative to the rhizosphere sediments, whereas no other metals showed statistical differences between barren sediment cores and rhizosphere sediments. However, no correlation was measured in T. testudinum tissue and Zn in rhizosphere sediments. Previous studies suggested that Fe/Mn ratios could indicate differences between seagrass environments. Our results indicate that there is an influence from the Rio Grande in the Fe/Mn signature in sediments, and that ratio is not reflected in the T. testudinum tissue. The results from this study show that the LLM contains trace metal concentrations less than or equal to values for uncontaminated locations worldwide. In addition, there appears to be a complex partitioning in the trace metals in the morphological units of T. testudinum tissue and that analysis only of the leaf may not be indicative of the trace metal levels in this important seagrass species.

Detection gas presence in lakes bottom sediments based on seismic investigations.

NASA Astrophysics Data System (ADS)

Krylov, Pavel; Nurgaliev, Danis; Yasonov, Pavel

2017-04-01

Seismic investigations are used for various tasks, such as the study of the bottom sediments properties, finding sunken objects, reconstruction the reservoir history, etc. Detailed seismic investigation has been carried out in the southern part of Lake Bol'shoe Yarovoe (Altai Krai), Lake Sunukul (Chelyabinsk region), Lake Kisegach to map the bottom sediments and features associated with the presence of gas. The obtained results demonstrate that various types of gas can be recognized in lakes sediments, such as pockmarks, acoustic turbidity, gas flares, seeps. These features, on the one hand, prevent the reconstruction of sequence stratigraphic patterns and, on the other hand, contribute to understanding of the processes of gas formation and migration in the sediments, possible impacts of these processes on the formation of sediments enriched in the organic matter. Also, it helps to recognize these processes in the ancient sediments. The paper points out the importance of studying the formation of methane in lake sediments, because it plays an important role in the climate change. The work was carried out according to the Russia Government's Program of Competitive Growth of Kazan Federal University, supported by the grant provided to the Kazan State University for performing the state program in the field of scientific research, and partially supported by the Russian Foundation for Basic research (grant nos. 16-35-00452).

Recovery of Humic-Reducing Bacteria from a Diversity of Environments

PubMed Central

Coates, John D.; Ellis, Debra J.; Blunt-Harris, Elizabeth L.; Gaw, Catherine V.; Roden, Eric E.; Lovley, Derek R.

1998-01-01

To evaluate which microorganisms might be responsible for microbial reduction of humic substances in sedimentary environments, humic-reducing bacteria were isolated from a variety of sediment types. These included lake sediments, pristine and contaminated wetland sediments, and marine sediments. In each of the sediment types, all of the humic reducers recovered with acetate as the electron donor and the humic substance analog, 2,6-anthraquinone disulfonate (AQDS), as the electron acceptor were members of the family Geobacteraceae. This was true whether the AQDS-reducing bacteria were enriched prior to isolation on solid media or were recovered from the highest positive dilutions of sediments in liquid media. All of the isolates tested not only conserved energy to support growth from acetate oxidation coupled to AQDS reduction but also could oxidize acetate with highly purified soil humic acids as the sole electron acceptor. All of the isolates tested were also able to grow with Fe(III) serving as the sole electron acceptor. This is consistent with previous studies that have suggested that the capacity for Fe(III) reduction is a common feature of all members of the Geobacteraceae. These studies demonstrate that the potential for microbial humic substance reduction can be found in a wide variety of sediment types and suggest that Geobacteraceae species might be important humic-reducing organisms in sediments. PMID:9546186

Anaerobic Degradation of Benzene, Toluene, Ethylbenzene, and o-Xylene in Sediment-Free Iron-Reducing Enrichment Cultures

PubMed Central

Jahn, Michael K.; Haderlein, Stefan B.; Meckenstock, Rainer U.

2005-01-01

Monoaromatic hydrocarbons such as benzene, toluene, ethylbenzene, and xylene (BTEX) are widespread contaminants in groundwater. We examined the anaerobic degradation of BTEX compounds with amorphous ferric oxide as electron acceptor. Successful enrichment cultures were obtained for all BTEX substrates both in the presence and absence of AQDS (9,10-anthraquinone-2,6-disulfonic acid). The electron balances showed a complete anaerobic oxidation of the aromatic compounds to CO2. This is the first report on the anaerobic degradation of o-xylene and ethylbenzene in sediment-free iron-reducing enrichment cultures. PMID:15933041

Differences in the Composition of Archaeal Communities in Sediments from Contrasting Zones of Lake Taihu

PubMed Central

Fan, Xianfang; Xing, Peng

2016-01-01

In shallow lakes, different primary producers might impact the physiochemical characteristics of the sediment and the associated microbial communities. Until now, little was known about the features of sediment Archaea and their variation across different primary producer-dominated ecosystems. Lake Taihu provides a suitable study area with cyanobacteria- and macrophyte-dominated zones co-occurring in one ecosystem. The composition of the sediment archaeal community was assessed using 16S rRNA gene amplicon sequencing technology, based on which the potential variation with respect to the physiochemical characteristics of the sediment was analyzed. Euryarchaeota (30.19% of total archaeal sequences) and Bathyarchaeota (28.00%) were the two most abundant phyla, followed by Crenarchaeota (11.37%), Aigarchaeota (10.24%) and Thaumarchaeota (5.98%). The differences found in the composition of the archaeal communities between the two zones was significant (p = 0.005). Sediment from macrophyte-dominated zones had high TOC and TN content and an abundance of archaeal lineages potentially involved in the degradation of complex organic compounds, such as the order Thermoplasmatales. In the area dominated by Cyanobacteria, archaeal lineages related to sulfur metabolism, for example, Sulfolobales and Desulfurococcales, were significantly enriched. Among Bathyarchaeota, subgroups MCG-6 and MCG-15 were significantly accumulated in the sediment of areas dominated by macrophytes whereas MCG-4 was consistently dominant in both type of sediments. The present study contributes to the knowledge of sediment archaeal communities with different primary producers and their possible biogeochemical functions in sediment habitats. PMID:27708641

Thermophilic nitrate-reducing microorganisms prevent sulfate reduction in cold marine sediments incubated at high temperature

NASA Astrophysics Data System (ADS)

Nepomnyashchaya, Yana; Rezende, Julia; Hubert, Casey

2014-05-01

Hydrogen sulphide produced during metabolism of sulphate-reducing microorganisms (SRM) is toxic, corrosive and causes detrimental oil reservoir souring. During secondary oil recovery, injecting oil reservoirs with seawater that is rich in sulphate and that also cools high temperature formations provides favourable growth conditions for SRM. Nitrate addition can prevent metabolism of SRM by stimulating nitrate-reducing microorganisms (NRM). The investigations of thermophilic NRM are needed to develop mechanisms to control the metabolism of SRM in high temperature oil field ecosystems. We therefore established a model system consisting of enrichment cultures of cold surface marine sediments from the Baltic Sea (Aarhus Bay) that were incubated at 60°C. Enrichments contained 25 mM nitrate and 40 mM sulphate as potential electron acceptors, and a mixture of the organic substrates acetate, lactate, propionate, butyrate (5 mM each) and yeast extract (0.01%) as potential carbon sources and electron donors. Slurries were incubated at 60°C both with and without initial pasteurization at 80°C for 2 hours. In the enrichments containing both nitrate and sulphate, the concentration of nitrate decreased indicating metabolic activity of NRM. After a four-hour lag phase the rate of nitrate reduction increased and the concentration of nitrate dropped to zero after 10 hours of incubation. The concentration of nitrite increased as the reduction of nitrate progressed and reached 16.3 mM after 12 hours, before being consumed and falling to 4.4 mM after 19-day of incubation. No evidence for sulphate reduction was observed in these cultures during the 19-day incubation period. In contrast, the concentration of sulphate decreased up to 50% after one week incubation in controls containing only sulphate but no nitrate. Similar sulfate reduction rates were seen in the pasteurized controls suggesting the presence of heat resistant SRM, whereas nitrate reduction rates were lower in the pasteurized experiment, suggesting either different populations of NRM or a population of NRM that was not resistant to the 80°C pre-treatment. These results demonstrate that thermophilic NRM exist in cold marine sediments from Aarhus Bay and can be enriched under appropriate conditions. Effective microbial control of SRM activity at high temperature in our Aarhus Bay sediment model system depends on the addition of nitrate to stimulate this group of microorganisms.

Environmental control on concretion-forming processes: Examples from Paleozoic terrigenous sediments of the North Gondwana margin, Armorican Massif (Middle Ordovician and Middle Devonian) and SW Sardinia (Late Ordovician)

NASA Astrophysics Data System (ADS)

Dabard, Marie-Pierre; Loi, Alfredo

2012-08-01

Concretions of various compositions are common in the Paleozoic terrigenous successions of the north Gondwana margin. This study focuses on phosphatic (P) and siliceous (Si) concretions present in some successions of the Armorican Massif (NW France) and SW Sardinia (W Italy). It shows that they consist of mudstones, fine- to very fine-grained sandstones or shellbeds with a more or less abundant P-cement and form a continuum between a phosphatic end-member and a siliceous biogenic end-member. The P2O5 contents are ranging from 0.26% to 21.5% and are related to apatite. The SiO2 contents vary from 25% to 82% and are linked both to a terrigenous phase and to a biogenic silica phase. Concretions showing the lower P-contents (P2O5 < 1.5%) are often enriched in biogenic silica (SiO2/Al2O3 > 5). Comparison with the surrounding sediments shows that all the concretions are enriched in chlorite and in Middle Rare Earth Elements (Las/Gds: 0.12-0.72) and some of them in Y (up to 974 ppm), Rare Earth Elements (more than 300 ppm) and Sr (260-880 ppm). The concretions with highest biogenic silica concentrations are contained in the outer shelf sediments whereas the other concretions are present from the proximal part of the inner shelf to the outer shelf. A genetic model in two stages is proposed. During early diagenesis, the dissolution of shells and degradation of organic matter progressively enrich the pore water in dissolved Si, Ca and P. When the suboxic zone is reached, P-precipitation begins, leading to the formation of protoconcretions. In shallow environments, the relative permeability of sediments and the winnowing or reworking of the upper few centimetres by bottom currents allow for suboxic conditions to be maintained, leading to P-rich concretion formation. In deeper environments, the anoxic zone is reached more rapidly, thereby preventing extensive phosphogenesis. Nevertheless in the protoconcretions the early P-cement preserves pore spaces from compaction. In the presence of biogenic siliceous particles, the fluids are enriched in dissolved silica and diffuse towards the protoconcretions. Silica precipitation can thus occur later in the intergranular spaces.

Contrasting fates of organic matter in locations having different organic matter inputs and bottom water O2 concentrations

NASA Astrophysics Data System (ADS)

Mai-Thi, Ngoc-Nu; St-Onge, Guillaume; Tremblay, Luc

2017-11-01

The goals of this work were to study sedimentary organic matter (OM) composition and transformation since the end of the last deglaciation and to evaluate the influence of contrasting depositional conditions on these parameters. One station was located in the Lower St. Lawrence Estuary (LSLE) where the current bottom waters are hypoxic and receive terrigenous and marine OM. The other station, located in the Gulf of St. Lawrence (GSL), has more oxygenated bottom waters and almost only marine OM inputs. Analyses included enantiomers of amino acids (L and D-AA) and muramic acid that provide different markers of OM alteration state and reactivity and of bacterial contribution to OM composition and diagenesis. The markers clearly indicated the increase in OM alteration state with depth in the sediments of the LSLE and the GSL. The steady decrease in AA yields with depth confirmed the preferential degradation of AA compared to the rest of the OM. The OM in the surface sediment of the LSLE was less altered than that of the GSL and was enriched in bacterial biomass as indicated by much higher muramic acid yields. Results indicated that an important degradation of particulate organic matter occurs in the water column in the GSL, while it takes place mostly in the sediments in the LSLE. The presence of heterogeneous OM and hypoxic conditions in the LSLE likely reduce OM degradation rate in its deep water layer. However, the zone near the water-sediment interface is responsible for large variations in AA composition at both locations. A relatively new redox index, based on AA composition, was tested and appeared robust. This study highlights the importance of ambient conditions in determining the fate of OM and in the biogeochemical cycles of vital elements.

The geochemistry of redox sensitive trace metals in sediments

NASA Astrophysics Data System (ADS)

Morford, Jennifer L.; Emerson, Steven

1999-06-01

We analyzed the redox sensitive elements V, Mo, U, Re and Cd in surface sediments from the Northwest African margin, the U.S. Northwest margin and the Arabian Sea to determine their response under a range of redox conditions. Where oxygen penetrates 1 cm or less into the sediments, Mo and V diffuse to the overlying water as Mn is reduced and remobilized. Authigenic enrichments of U, Re and Cd are evident under these redox conditions. With the onset of sulfate reduction, all of the metals accumulate authigenically with Re being by far the most enriched. General trends in authigenic metal accumulation are described by calculating authigenic fluxes for the 3 main redox regimes: oxic, reducing where oxygen penetrates ≤1 cm, and anoxic conditions. Using a simple diagenesis model and global estimates of organic carbon rain rate and bottom water oxygen concentrations, we calculate the area of sediments below 1000 m water depth in which oxygen penetration is ≤1 cm to be 4% of the ocean floor. We conclude that sediments where oxygen penetrates ≤1 cm release Mn, V and Mo to seawater at rates of 140%-260%, 60%-150% and 5%-10% of their respective riverine fluxes, using the authigenic metal concentrations and accumulation rates from this work and other literature. These sediments are sinks for Re, Cd and U, with burial fluxes of 70%-140%, 30%-80% and 20%-40%, respectively, of their dissolved riverine inputs. We modeled the sensitivity of the response of seawater Re, Cd and V concentrations to changes in the area of reducing sediments where oxygen penetrates ≤1 cm. Our analysis suggests a negligible change in seawater Re concentration, whereas seawater concentrations of Cd and V could have decreased and increased, respectively, by 5%-10% over 20 kyr if the area of reducing sediments increased by a factor of 2 and by 10%-20% if the area increased by a factor of 3. The concentration variations for a factor of 2 increase in the area of reducing sediments are at about the level of uncertainty of Cd/Ca and V/Ca ratios observed in foraminifera shells over the last 40 kyr. This implies that the area of reducing sediments in the ocean deeper than 1000 m (4%) has not been greater than twice the present value in the recent past.

Bioremoval of trace metals from rhizosediment by mangrove plants in Indian Sundarban Wetland.

PubMed

Chowdhury, Ranju; Favas, Paulo J C; Jonathan, M P; Venkatachalam, Perumal; Raja, P; Sarkar, Santosh Kumar

2017-11-30

The study accentuated the trace metal accumulation and distribution pattern in individual organs of 13 native mangrove plants along with rhizosediments in the Indian Sundarban Wetland. Enrichment of the essential micronutrients (Mn, Fe, Zn, Cu, Co, Ni) was recorded in all plant organs in comparison to non-essential ones, such as Cr, As, Pb, Cd, Hg. Trunk bark and root/pneumatophore showed maximum metal accumulation efficiency. Rhizosediment recorded manifold increase for most of the trace metals than plant tissue, with the following descending order: Fe>Mn>Zn>Cu>Pb>Ni>Cr>Co>As>Cd>Hg. Concentrations of Cu, Ni, Pb and Hg were found to exceed prescribed sediment quality guidelines (SQGs) indicating adverse effect on adjacent biota. Both index of geoaccumulation (I geo ) and enrichment factor (EF) also indicated anthropogenic contamination. Based on high (>1) translocation factor (TF) and bioconcentration factor (BCF) values Sonneratiaapetala and Avicenniaofficinalis could be considered as potential accumulators, of trace metals. Copyright © 2017 Elsevier Ltd. All rights reserved.

Geochemistry of a Tertiary sedimentary phosphate deposit: Baja California Sur, Mexico

USGS Publications Warehouse

Piper, D.Z.

1991-01-01

The San Gregorio Formation in Baja California Sur, a phosphate-enriched sedimentary unit of late Oligocene to early Miocene age, has been analyzed in two areas (La Purisima and San Hilario) for its chemical composition (major oxides, Cu, Cd, Cr, Co, V, and rare-earth elements - REE) and isotopic composition (??18O and ??13C). A detrital and a marine component were determined from major oxides. The detrital component consists of an unaltered volcanic-ash fraction and a terrigenous clay-silt fraction. The marine component, which accumulated initially as biogenic and hydrogenous material, is now present as opal-A, opal-CT, CaCO3, organic matter, and an authigenic phosphate fraction, mostly pelletal and composed of the carbonate-fluorapatite mineral francolite. The minor elements have been partitioned into these components by assuming a constant composition for the two detrital fractions. The composition of the marine component of minor elements can then be interpreted by assuming that the stoichiometry of the original accumulating organic matter was equal to that of modern plankton. The Cu and Cd contents in the marine component of all rocks require that the seawater-derived fractions of these two metals were supplied to the seafloor solely by organic matter. Enrichments of Cr and V at both sites required an additional marine input. On the basis of their geochemistry in the modern ocean, Cr and V could have precipitated, or been adsorbed, onto settling particles from an O2 minimum zone in which the O2 content was low enough to promote denitrification rather than oxygen respiration. An enrichment of the REE, now within the apatite fraction, resulted from their adsorption onto particulates also in the O2 minimum zone and to the dissolution and alteration of biogenic phases (predominantly silica) within the sediment. Co and Fe2O3 show no enrichment above a detrital contribution. The ??18O-values of apatites from the La Purisima site are heavier than those of apatites from the San Hilario site, whereas the ??13C-values show the opposite trend. One possible interpretation of these variations is that ??18O reflects seawater values and ??13C sediment pore water values. This interpretation suggests that upwelling rates and primary productivity within the water column were greater at La Purisima, an interpretation that is corroborated by a greater abundance of apatite measured in outcrop at La Purisima. The Ce anomalies of the phosphate-enriched samples also differ between the two sites, indicating that they also recorded water masses, similar to the ??18O-values. ?? 1991.

Artificial topography changes the growth strategy of Spartina alterniflora, case study with wave exposure as a comparison.

PubMed

Hong, Hualong; Dai, Minyue; Lu, Haoliang; Liu, Jingchun; Zhang, Jie; Chen, Chaoqi; Xia, Kang; Yan, Chongling

2017-11-17

This paper reports findings about the growth of Spartina alterniflora (Loisel.) near an engineered coastal protection defences to discover the potential influences on vegetation growth from the artificial topography. Impacts of the artificial topography on the sediment element composition were detected by comparing the fixed effects caused by artificial topography and wave exposure using linear mixed models. Surficial sediments under the impacts of artificial topography contain elevated levels of biogenic elements and heavy metals, including C (and organic carbon), N, S, Al, Fe, Mn, Cu, Zn, As, Cd, Cr, Ni, and Pb. The results showed that element enrichment caused by artificial topography reduced the vegetation sexual reproduction. Contrary to the potential inhibition caused by direct wave exposure, which was due to the biomass accumulation limit, the inhibition caused by artificial topography was related to the transition of growth strategy. The contents of Cu, Mn, N, Ni, S and As in the sediments were critical in considering the relationship between the change in the sediment element composition and the alteration in the plant growth. Our study emphasizes the importance of rethinking the impacts of coastal development projects, especially regarding the heterogeneity of sediment element composition and its ecological consequences.

Tracing Sources of Organic Matter in a Midwestern USA Reservoir using Online Tetramethylammonium Hydroxide (TMAH) Thermochemolysis

NASA Astrophysics Data System (ADS)

Hayes, J. M.; Blair, N. E.

2017-12-01

Increasingly industrial agriculture and food processing practices have created greater demand for water resources. In an attempt to meet this demand, many rivers have been dammed, however the resulting effects of the carbon cycle via carbon sequestration and methane production are not well understood. The organic geochemistry of sediment cores from Lake Decatur, IL, a 95-year-old impoundment on the Sangamon River in the Intensively Managed Landscape - Critical Zone Observatory (IML-CZO), was studied to assess the sources of organic matter to the lake. Online tetramethylammonium hydroxide (TMAH) thermochemolysis GC-MS was used to provide a broad-spectrum analysis using small samples with a minimum of preparation. Intensive corn and soy production have dominated Lake Decatur's nearly 2400 km2 watershed throughout its history. The agricultural land use has led to rapid soil erosion and infilling of the lake. Along with the eroded soil came organic matter enriched in 13C, which is attributed to corn, a C4 plant. This is consistent with an angiosperm-derived lignin signal, as indicated by high syringic/vanillic and cinnamic/vanillic lignin phenol ratios. Since approximately 1980, accumulating organic carbon has become increasingly 13C-depleted, indicating a change in organic carbon input to a more C3 plant signature. However, this is not due to a decrease in corn cultivation acreage, according to land use records. Instead, the ratio of algal (short chain, C12-C18) fatty acids to lignin increases correspondingly from this point, suggesting that this isotopic trend is the result of eutrophication in the lake due to agricultural fertilizer runoff. In the last decade, the organic carbon has become more 13C-enriched again, breaking the trend of the three previous decades. This inflection is captured in the return to a lower fatty acid to lignin ratio in the most recently deposited sediments. We speculate that this recent change in organic carbon input could be the result of practices to mitigate fertilizer runoff. The organic geochemical record in the reservoir allows us to temporally resolve the agricultural impacts on soil erosion and nutrient runoff in the watershed.

Organic carbon sources across salinity gradients in Chilean Fjords: Reloncaví Fjord ( 41°S) and Southern Patagonian ice fields area ( 48°S)

NASA Astrophysics Data System (ADS)

Placencia, Juan; Llanos, Gustavo; Contreras, Sergio

2017-04-01

The organic matter preserved in marine sediments contains contributions of allochthonous and autochthonous and variable source inputs. Allochthonous sources are terrestrial erosion (including anthropogenic material) of relatively labile and refractory material, while autochthonous sources including marine phytoplankton. In order to establish the sources of the organic matter (allochthonous/autochthonous) and how organic carbon is distributed along a salinity gradient, on this study we examined of organic Carbon/Nitrogen molar ratios (C:N), isotopic composition (δ13C) and n-alkanes (n-C24 to n-C34) in surface sediments from two continuous systems: river-fjord-ocean in Northern Patagonia (41°S-43°S), and glacier-fjord-ocean in central Patagonia (47°S-50°S). The continental inner fjord areas are characterized with sediment enriched in allochthonous organic carbon and high C:N (8-12) and low δ13C values (-23‰ to -26‰). Towards the Pacific Ocean, low C:N (6-7) and high δ13C values (-20‰ to -22‰) suggest prevalent autochthonous marine sources. Estuarine waters with salinity between 2 psu and 30 psu were associated with high C:N and low δ13C values together with odd over even long-chain n-alkane predominance (n-C31, n-C29 and n-C27) in surface sediments. All geochemical proxies suggest a great contribution of terrigenous input by glacier origin rivers, mainly from terrestrial plants in both areas. Our study provides a framework to guide future researches on environmental and climate change on these systems. This study was supported by the Chilean Navy's Hydrographic and Oceanographic Service, the Chilean National Oceanographic Committee through the Grants CONA C19F1308 and C20F1404, and the Research Office at Universidad Católica de la Ssma. Concepción.

The history of hexachlorobenzene accumulation in Svalbard fjords.

PubMed

Pouch, A; Zaborska, A; Pazdro, K

2018-05-24

In the present study, we investigated the spatial and historical trends of hexachlorobenzene (HCB) contamination in dated sediments of three Svalbard fjords (Kongsfjorden, Hornsund, Adventfjorden) differing in environmental conditions and human impact. HCB concentrations ranging from below limit of quantification (6.86 pg/g d.w.) to 143.99 pg/g d.w. were measured. The highest concentrations were measured in two surface sediment layers of the core collected in Hornsund near the melting glacier. The lowest concentrations of HCB were measured in Adventfjorden, suggesting that local source of HCB is not significant and global transport processes are the major transport pathways. The history of HCB deposition did not fully reflect the history of HCB emission (largest in 1950s and 1960s). In case of several sediment cores, the HCB enrichment in surface (recent) sediments was noticed. This can indicate importance of secondary sources of HCB, e.g., the influx of HCB accumulated over decades on the surface of glaciers. Detected levels of HCB were generally low and did not exceed background concentration levels; thus, a negative effect on benthic organisms is not expected.

Hydraulic-based empirical model for sediment and soil organic carbon loss on steep slopes for extreme rainstorms on the Chinese loess Plateau

NASA Astrophysics Data System (ADS)

Liu, L.; Li, Z. W.; Nie, X. D.; He, J. J.; Huang, B.; Chang, X. F.; Liu, C.; Xiao, H. B.; Wang, D. Y.

2017-11-01

Building a hydraulic-based empirical model for sediment and soil organic carbon (SOC) loss is significant because of the complex erosion process that includes gravitational erosion, ephemeral gully, and gully erosion for loess soils. To address this issue, a simulation of rainfall experiments was conducted in a 1 m × 5 m box on slope gradients of 15°, 20°, and 25° for four typical loess soils with different textures, namely, Ansai, Changwu, Suide, and Yangling. The simulated rainfall of 120 mm h-1 lasted for 45 min. Among the five hydraulic factors (i.e., flow velocity, runoff depth, shear stress, stream power, and unit stream power), flow velocity and stream power showed close relationships with SOC concentration, especially the average flow velocity at 2 m from the outlet where the runoff attained the maximum sediment load. Flow velocity controlled SOC enrichment by affecting the suspension-saltation transport associated with the clay and silt contents in sediments. In consideration of runoff rate, average flow velocity at 2 m location from the outlet, and slope steepness as input variables, a hydraulic-based sediment and SOC loss model was built on the basis of the relationships of hydraulic factors to sediment and SOC loss. Nonlinear regression models were built to calculate the parameters of the model. The difference between the effective and dispersed median diameter (δD50) or the SOC content of the original soil served as the independent variable. The hydraulic-based sediment and SOC loss model exhibited good performance for the Suide and Changwu soils, that is, these soils contained lower amounts of aggregates than those of Ansai and Yangling soils. The hydraulic-based empirical model for sediment and SOC loss can serve as an important reference for physical-based sediment models and can bring new insights into SOC loss prediction when serious erosion occurs on steep slopes.

Optimizing sample pretreatment for compound-specific stable carbon isotopic analysis of amino sugars in marine sediment

NASA Astrophysics Data System (ADS)

Zhu, R.; Lin, Y.-S.; Lipp, J. S.; Meador, T. B.; Hinrichs, K.-U.

2014-09-01

Amino sugars are quantitatively significant constituents of soil and marine sediment, but their sources and turnover in environmental samples remain poorly understood. The stable carbon isotopic composition of amino sugars can provide information on the lifestyles of their source organisms and can be monitored during incubations with labeled substrates to estimate the turnover rates of microbial populations. However, until now, such investigation has been carried out only with soil samples, partly because of the much lower abundance of amino sugars in marine environments. We therefore optimized a procedure for compound-specific isotopic analysis of amino sugars in marine sediment, employing gas chromatography-isotope ratio mass spectrometry. The whole procedure consisted of hydrolysis, neutralization, enrichment, and derivatization of amino sugars. Except for the derivatization step, the protocol introduced negligible isotopic fractionation, and the minimum requirement of amino sugar for isotopic analysis was 20 ng, i.e., equivalent to ~8 ng of amino sugar carbon. Compound-specific stable carbon isotopic analysis of amino sugars obtained from marine sediment extracts indicated that glucosamine and galactosamine were mainly derived from organic detritus, whereas muramic acid showed isotopic imprints from indigenous bacterial activities. The δ13C analysis of amino sugars provides a valuable addition to the biomarker-based characterization of microbial metabolism in the deep marine biosphere, which so far has been lipid oriented and biased towards the detection of archaeal signals.

Centennial record of anthropogenic impacts in Galveston Bay: Evidence from trace metals (Hg, Pb, Ni, Zn) and lignin oxidation products.

PubMed

Al Mukaimi, Mohammad E; Kaiser, Karl; Williams, Joshua R; Dellapenna, Timothy M; Louchouarn, Patrick; Santschi, Peter H

2018-06-01

During the 20th century the impacts of industrialization and urbanization in Galveston Bay resulted in significant shifts in trace metals (Hg, Pb, Ni, Zn) and vascular plant biomarkers (lignin phenols) recorded within the surface sediments and sediment cores profile. A total of 22 sediment cores were collected in Galveston Bay in order to reconstruct the historical input of Hg, Pb, Ni, Zn and terrestrial organic matter. Total Hg (T-Hg) concentration ranged between 6 and 162 ng g -1 in surface sediments, and showed decreasing concentrations southward from the Houston Ship Channel (HSC) toward the open estuary. Core profiles of T-Hg and trace metals (Ni, Zn) showed substantial inputs starting in 1905, with peak concentrations between 1960 and 1970's, and decreasing thereafter with exception to Pb, which peaked around 1930-1940s. Stable carbon isotopes and lignin phenols showed an increasing input of terrestrial organic matter driven by urban development within the watershed in the early 1940s. Both the enrichment factor and the geoaccumulation index (I geo ) for T-Hg as a measure of the effectiveness of environmental management practices showed substantial improvements since the 1970s. The natural recovery rate in Galveston Bay since the peak input of T-Hg was non-linear and displayed a slow recovery during the twenty-first century. Copyright © 2018 Elsevier Ltd. All rights reserved.

Coastal eutrophication thresholds: a matter of sediment microbial processes.

PubMed

Lehtoranta, Jouni; Ekholm, Petri; Pitkänen, Heikki

2009-09-01

In marine sediments, the major anaerobic mineralization processes are Fe(III) oxide reduction and sulfate reduction. In this article, we propose that the two alternative microbial mineralization pathways in sediments exert decisively different impacts on aquatic ecosystems. In systems where iron reduction dominates in the recently deposited sediment layers, the fraction of Fe(III) oxides that is dissolved to Fe(II) upon reduction will ultimately be transported to the oxic layer, where it will be reoxidized. Phosphorus, which is released from Fe(III) oxides and decomposing organic matter from the sediment, will be largely trapped by this newly formed Fe(III) oxide layer. Consequently, there are low concentrations of phosphorus in near-bottom and productive water layers and primary production tends to be limited by phosphorus (State 1). By contrast, in systems where sulfate reduction dominates, Fe(III) oxides are reduced by sulfides. This chemical reduction leads to the formation and permanent burial of iron as solid iron sulfides that are unable to capture phosphorus. In addition, the cycling of iron is blocked, and phosphorus is released to overlying water. Owing to the enrichment of phosphorus in water, the nitrogen : phosphorus ratio is lowered and nitrogen tends to limit algal growth, giving an advantage to nitrogen-fixing blue-green algae (State 2). A major factor causing a shift from State 1 to State 2 is an increase in the flux of labile organic carbon to the bottom sediments; upon accelerating eutrophication a critical point will be reached when the availability of Fe(III) oxides in sediments will be exhausted and sulfate reduction will become dominant. Because the reserves of Fe(III) oxides are replenished only slowly, reversal to State 1 may markedly exceed the time needed to reduce the flux of organic carbon to the sediment. A key factor affecting the sensitivity of a coastal system to such a regime shift is formed by the hydrodynamic alterations that decrease the transport of O2 to the near-bottom water, e.g., due to variations in salinity and temperature stratification.

Organic matter mineralization and trace element post-depositional redistribution in Western Siberia thermokarst lake sediments

NASA Astrophysics Data System (ADS)

Audry, S.; Pokrovsky, O. S.; Shirokova, L. S.; Kirpotin, S. N.; Dupré, B.

2011-11-01

This study reports the very first results on high-resolution sampling of sediments and their porewaters from three thermokarst (thaw) lakes representing different stages of ecosystem development located within the Nadym-Pur interfluve of the Western Siberia plain. Up to present time, the lake sediments of this and other permafrost-affected regions remain unexplored regarding their biogeochemical behavior. The aim of this study was to (i) document the early diagenesic processes in order to assess their impact on the organic carbon stored in the underlying permafrost, and (ii) characterize the post-depositional redistribution of trace elements and their impact on the water column. The estimated organic carbon (OC) stock in thermokarst lake sediments of 14 ± 2 kg m-2 is low compared to that reported for peat soils from the same region and denotes intense organic matter (OM) mineralization. Mineralization of OM in the thermokarst lake sediments proceeds under anoxic conditions in all the three lakes. In the course of the lake development, a shift in mineralization pathways from nitrate and sulfate to Fe- and Mn-oxyhydroxides as the main terminal electron acceptors in the early diagenetic reactions was suggested. This shift was likely promoted by the diagenetic consumption of nitrate and sulfate and their gradual depletion in the water column due to progressively decreasing frozen peat lixiviation occurring at the lake's borders. Trace elements were mobilized from host phases (OM and Fe- and Mn-oxyhydroxides) and partly sequestered in the sediment in the form of authigenic Fe-sulfides. Arsenic and Sb cycling was also closely linked to that of OM and Fe- and Mn-oxyhydroxides. Shallow diagenetic enrichment of particulate Sb was observed in the less mature stages. As a result of authigenic sulfide precipitation, the sediments of the early stage of ecosystem development were a sink for water column Cu, Zn, Cd, Pb and Sb. In contrast, at all stages of ecosystem development, the sediments were a source of dissolved Co, Ni and As to the water column. However, the concentrations of these trace elements remained low in the bottom waters, indicating that sorption processes on Fe-bounding particles and/or large-size organo-mineral colloids could mitigate the impact of post-depositional redistribution of toxic elements on the water column.

Organic matter mineralization and trace element post-depositional redistribution in Western Siberia thermokarst lake sediments

NASA Astrophysics Data System (ADS)

Audry, S.; Pokrovsky, O. S.; Shirokova, L. S.; Kirpotin, S. N.; Dupré, B.

2011-08-01

This study reports the very first results on high-resolution sampling of sediments and their porewaters from three thermokarst (thaw) lakes representing different stages of ecosystem development located within the Nadym-Pur interfluve of the Western Siberia plain. Up to present time, the lake sediments of this and other permafrost-affected regions remain unexplored regarding their biogeochemical behavior. The aim of this study was to (i) document the early diagenesic processes in order to assess their impact on the organic carbon stored in the underlying permafrost, and (ii) characterize the post-depositional redistribution of trace elements and their impact on the water column. The estimated organic carbon (OC) stock in thermokarst lake sediments of 14 ± 2 kg m-2 is low compared to that reported for peat soils from the same region and denotes intense organic matter (OM) mineralization. Mineralization of OM in the thermokarst lake sediments proceeds under anoxic conditions in all the three lakes. In the course of the lake development, a shift in mineralization pathways was evidenced from nitrate and sulfate to Fe- and Mn-oxyhydroxides as the main terminal electron acceptors in the early diagenetic reactions. This shift was promoted by the diagenetic consumption of nitrate and sulfate and their gradual depletion in the water column due to progressively decreasing frozen peat lixiviation occurring at the lake's borders. Trace elements were mobilized from host phases (OM and Fe- and Mn-oxyhydroxides) and partly sequestered in the sediment in the form of authigenic Fe-sulfides. Arsenic and Sb cycling was also closely linked to that of OM and Fe- and Mn-oxyhydroxides. Shallow diagenetic enrichment of particulate Sb was observed in the less mature stages. As a result of authigenic sulfide precipitation, the sediments of the early stage of ecosystem development were a sink for water column Cu, Zn, Cd, Pb and Sb. In contrast, at all stages of ecosystem development, the sediments were a source of dissolved Co, Ni and As to the water column. However, the concentrations of these trace elements remained low in the bottom waters, indicating that sorption processes on Fe-bounding particles and/or large-size organo-mineral colloids could mitigate the impact of post-depositional redistribution of toxic elements on the water column.

Metagenomic evidence for reciprocal particle exchange between the mainstem estuary and lateral bay sediments of the lower Columbia River

PubMed Central

Smith, Maria W.; Davis, Richard E.; Youngblut, Nicholas D.; Kärnä, Tuomas; Herfort, Lydie; Whitaker, Rachel J.; Metcalf, William W.; Tebo, Bradley M.; Baptista, António M.; Simon, Holly M.

2015-01-01

Lateral bays of the lower Columbia River estuary are areas of enhanced water retention that influence net ecosystem metabolism through activities of their diverse microbial communities. Metagenomic characterization of sediment microbiota from three disparate sites in two brackish lateral bays (Baker and Youngs) produced ∼100 Gbp of DNA sequence data analyzed subsequently for predicted SSU rRNA and peptide-coding genes. The metagenomes were dominated by Bacteria. A large component of Eukaryota was present in Youngs Bay samples, i.e., the inner bay sediment was enriched with the invasive New Zealand mudsnail, Potamopyrgus antipodarum, known for high ammonia production. The metagenome was also highly enriched with an archaeal ammonia oxidizer closely related to Nitrosoarchaeum limnia. Combined analysis of sequences and continuous, high-resolution time series of biogeochemical data from fixed and mobile platforms revealed the importance of large-scale reciprocal particle exchanges between the mainstem estuarine water column and lateral bay sediments. Deposition of marine diatom particles in sediments near Youngs Bay mouth was associated with a dramatic enrichment of Bacteroidetes (58% of total Bacteria) and corresponding genes involved in phytoplankton polysaccharide degradation. The Baker Bay sediment metagenome contained abundant Archaea, including diverse methanogens, as well as functional genes for methylotrophy and taxonomic markers for syntrophic bacteria, suggesting that active methane cycling occurs at this location. Our previous work showed enrichments of similar anaerobic taxa in particulate matter of the mainstem estuarine water column. In total, our results identify the lateral bays as both sources and sinks of biogenic particles significantly impacting microbial community composition and biogeochemical activities in the estuary. PMID:26483785

Distributions and Sources of Bulk Organic Matter in Sediments of Five Estuaries in Todos os Santos Bay, Brazil.

NASA Astrophysics Data System (ADS)

Leonel, J.; Hatje, V.

2016-02-01

Total organic carbon (TOC), total nitrogen (TN) and their δ13C and δ15N values were determined in cores and surficial sediments to evaluate organic matter contents and sources. Samples were collected along the salinity gradient of five estuaries (Paraguaçu, Subaé, Jaguaribe, São Paulo and Mataripe) of the Todos os Santos Bay (BTS), the second largest bay in Brazil. TOC values ranged from 0.7 to 2.7% and TOC/TN ranged between 1.8 and 8.3. Overall, a slight seaward decrease in %TOC as well as C/N is observed. Values of TOC/TN lower than the Redfield ratios were found in most samples from São Paulo and Mataripe estuaries. This is possibly the result of the anthropogenic impacts caused by oil related activities developed in the region. However, natural causes, such as preferential sorption of inorganic N or bacterially derived organic matters in the sediment, should not be dismissed. Indeed, the influence of inorganic N was also indicated by the low correlation found between TOC and TN values in some estuaries and the positive intercept observed in others, the suggesting that they come from different sources. In general, δ13C values ranged from -26.9 to -20.3‰ and enrichment was observed seaward. Consequently, δ13C has a negatively correlation with the TOC /TN values, except for Subaé River. In all estuaries the δ13Cvalues suggest a mixed marine/terrestrial source of the organic matter with an increase of marine influence towards the river mouth.

Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

NASA Astrophysics Data System (ADS)

Uthicke, S.; Thompson, A.; Schaffelke, B.

2010-03-01

Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.

Assessment of organic pollutants in the offshore sediments of Dubai, United Arab Emirates

NASA Astrophysics Data System (ADS)

Darwish, H. A. Al; El-Gawad, E. A. Abd; Mohammed, F. H.; Lotfy, M. M.

2005-08-01

Fifteen stations (st) were selected along Dubai coastal region to delineate the distribution and the source of total petroleum hydrocarbon (TPH), total organic carbon (TOC), total Kjeldhal nitrogen (TKN), polycyclic aromatic hydrocarbon (PAHs) and polychlorinated biphenyls. The concentrations of TPH fluctuated between 2 μg g -1 and 48018 μg g -1 and the values of TOC were in the range of 0.16-5.9 wt%, while TPAHs ranged from 0.09 μg g -1 to 161.72 μg g -1. On the other hand, TPCBs showed values between 0.8 μg kg-1 and 93.3 μg kg-1 and TKN values varied from 218 μg g-1 to 2457 μg g -1. Distribution of oil and organic compounds in Dubai sediments are safe compared with previous studies except for limited areas at the northeastern offshore. These readings are probably due to: (1) presence of commercial or industrial ports, dry docks and fishing harbours and (2) population centers mainly concentrated at the northern part of the study area. Results indicate that TOC can be used as indicator of oil pollution only in heavily oiled sediments. The highest values of TOC, TPH, TPAHs and TPCBs corresponded to the stations covered with fine sand, due to adsorption properties and larger surface area. The evaporation of low boiling point compounds from surface layers led to enrichment of sediments with the thick residual. Al-Hamriya St 3 exhibited the highest values of TPH, TOC, TPAHs and TPCBs and the second highest value of TKN.

Mercury sedimentation in lakes in western Whatcom County, Washington, USA and its relation to local industrial and municipal atmospheric sources

USGS Publications Warehouse

Paulson, A.J.; Norton, D.

2008-01-01

Concentrations of mercury (Hg) were measured in six dated cores from four lakes in western Whatcom County, Washington, USA, that were at various bearings from a chlor-alkali plant, two municipal waste incinerators and a municipal sewage sludge incinerator. The importance of atmospheric emissions of Hg from these local municipal and industrial sources was evaluating by comparing the temporal trends in sedimentation of the lake cores with the emission history of each Hg species and by examining the geographical distribution of Hg sedimentation in relation to the region's primary wind pattern. Local municipal and industrial sources of atmospheric Hg were not responsible for the majority of the Hg in the upper layer of sediments of Whatcom County lakes because of (1) the significant enrichment of Hg in lake sediments prior to emissions of local industrial and municipal sources in 1964, (2) smaller increases in Hg concentrations occurred after 1964, (3) the similarity of maximum enrichments found in Whatcom County lakes to those in rural lakes around the world, (4) the inconsistency of the temporal trends in Hg sedimentation with the local emission history, and (5) the inconsistency of the geographic trends in Hg sedimentation with estimated deposition. Maximum enrichment ratios of Hg in lake sediments between 2 and 3 that are similar to rural areas in Alaska, Minnesota, and New England suggest that global sources of Hg were primarily responsible for increases of Hg in Whatcom County lakes beginning about 1900. ?? 2007 GovernmentEmployee: U.S. Government, Department of Interior, U.S. Geological Survey.

Origin, transport and deposition of leaf-wax biomarkers in the Amazon Basin and the adjacent Atlantic

NASA Astrophysics Data System (ADS)

Häggi, Christoph; Sawakuchi, André O.; Chiessi, Cristiano M.; Mulitza, Stefan; Mollenhauer, Gesine; Sawakuchi, Henrique O.; Baker, Paul A.; Zabel, Matthias; Schefuß, Enno

2016-11-01

Paleoenvironmental studies based on terrigenous biomarker proxies from sediment cores collected close to the mouth of large river systems rely on a proper understanding of the processes controlling origin, transport and deposition of biomarkers. Here, we contribute to the understanding of these processes by analyzing long-chain n-alkanes from the Amazon River system. We use the δD composition of long-chain n-alkanes from river bed sediments from the Amazon River and its major tributaries, as well as marine core-top samples collected off northeastern South America as tracers for different source areas. The δ13C composition of the same compounds is used to differentiate between long-chain n-alkanes from modern forest vegetation and petrogenic organic matter. Our δ13C results show depleted δ13C values (-33 to -36‰) in most samples, indicating a modern forest source for most of the samples. Enriched values (-31 to -33‰) are only found in a few samples poor in organic carbon indicating minor contributions from a fossil petrogenic source. Long-chain n-alkane δD analyses show more depleted values for the western tributaries, the Madeira and Solimões Rivers (-152 to -168‰), while n-alkanes from the lowland tributaries, the Negro, Xingu and Tocantins Rivers (-142 to -154‰), yield more enriched values. The n-alkane δD values thus reflect the mean annual isotopic composition of precipitation, which is most deuterium-depleted in the western Amazon Basin and more enriched in the eastern sector of the basin. Samples from the Amazon estuary show a mixed long-chain n-alkane δD signal from both eastern lowland and western tributaries. Marine core-top samples underlying the Amazon freshwater plume yield δD values similar to those from the Amazon estuary, while core-top samples from outside the plume showed more enriched values. Although the variability in the river bed data precludes quantitative assessment of relative contributions, our results indicate that long-chain n-alkanes from the Amazon estuary and plume represent an integrated signal of different regions of the onshore basin. Our results also imply that n-alkanes are not extensively remineralized during transport and that the signal at the Amazon estuary and plume includes refractory compounds derived from the western sector of the Basin. These findings will aid in the interpretation of plant wax-based records of marine sediment cores collected from the adjacent ocean.

Distribution of selenium, molybdenum and uranium in sediment cores from the Colorado River delta, Baja California, Mexico.

PubMed

Orozco-Durán, A; Daesslé, L W; Gutiérrez-Galindo, E A; Muñoz-Barbosa, A

2012-01-01

The distribution of selenium, molybdenum and uranium was studied in ~1.5 m sediment cores from the Colorado River delta, at the Colorado (CR) and Hardy (HR) riverbeds. Core HR2 showed highest Se, Mo and U concentrations at its bottom (2.3, 0.95 and 1.8 μg g(-1)) within a sandy-silt layer deposited prior to dam construction. In CR5 the highest concentrations of these elements (0.9, 1.4 and 1.7 μg g(-1) respectively) were located at the top of the core within a surface layer enriched in organic carbon. A few samples from HR2 had Se above the probable toxic effect level guidelines.

Effect of different enrichment strategies on microbial community structure in petroleum-contaminated marine sediment in Dalian, China.

PubMed

Chen, Chao; Liu, Qiu; Liu, Changjian; Yu, Jicheng

2017-04-15

An oil spill occurred at Xingang Port, Dalian, China in 2010. Four years after this spill, oil contamination was still detected in samples collected nearby. In this study, the strains that evolved in the sediment were screened by high-throughput sequencing technology. Most of these strains were genera reported to have functions associated with crude oil biodegradation. The diversities and numbers of microbes were monitored through enrichment culturing; the dominant strains propagated at first, but the enrichment could not be continued, which indicated that the prolonged culture was not effective in the enrichment of the micro-consortium. Oxygen was also observed to affect the propagation of the dominant microbes. The results showed the role of culture strategies and oxygen in the enrichment of the petroleum-degrading microbes. Therefore, dominant strains could be screened by optimizing both the enrichment time and oxygen concentration used for culturing to facilitate oil biodegradation in the marine ecosystem. Copyright © 2017 Elsevier Ltd. All rights reserved.

Analyzing the contribution of climate change to long-term variations in sediment nitrogen sources for reservoirs/lakes.

PubMed

Xia, Xinghui; Wu, Qiong; Zhu, Baotong; Zhao, Pujun; Zhang, Shangwei; Yang, Lingyan

2015-08-01

We applied a mixing model based on stable isotopic δ(13)C, δ(15)N, and C:N ratios to estimate the contributions of multiple sources to sediment nitrogen. We also developed a conceptual model describing and analyzing the impacts of climate change on nitrogen enrichment. These two models were conducted in Miyun Reservoir to analyze the contribution of climate change to the variations in sediment nitrogen sources based on two (210)Pb and (137)Cs dated sediment cores. The results showed that during the past 50years, average contributions of soil and fertilizer, submerged macrophytes, N2-fixing phytoplankton, and non-N2-fixing phytoplankton were 40.7%, 40.3%, 11.8%, and 7.2%, respectively. In addition, total nitrogen (TN) contents in sediment showed significant increasing trends from 1960 to 2010, and sediment nitrogen of both submerged macrophytes and phytoplankton sources exhibited significant increasing trends during the past 50years. In contrast, soil and fertilizer sources showed a significant decreasing trend from 1990 to 2010. According to the changing trend of N2-fixing phytoplankton, changes of temperature and sunshine duration accounted for at least 43% of the trend in the sediment nitrogen enrichment over the past 50years. Regression analysis of the climatic factors on nitrogen sources showed that the contributions of precipitation, temperature, and sunshine duration to the variations in sediment nitrogen sources ranged from 18.5% to 60.3%. The study demonstrates that the mixing model provides a robust method for calculating the contribution of multiple nitrogen sources in sediment, and this study also suggests that N2-fixing phytoplankton could be regarded as an important response factor for assessing the impacts of climate change on nitrogen enrichment. Copyright © 2015 Elsevier B.V. All rights reserved.

Magnetic susceptibility as an indicator to paleo-environmental pollution in an urban lagoon near Istanbul city

NASA Astrophysics Data System (ADS)

Alpar, Bedri; Unlu, Selma; Altinok, Yildiz; Ongen, Sinan

2014-05-01

For assessing anthropogenic pollution, magnetic susceptibility profiles and accompanying data were measured along three short cores recovered at the southern part of an urban lagoon; Kucukcekmece, Istanbul, Turkey. This marine inlet, connected to the Sea of Marmara by a very narrow channel, was used as a drinking water reservoir 40-50 years ago before it was contaminated by municipal, agricultural and industrial activities, mainly carried by three streams feeding the lagoon. The magnetic signals decrease gradually from the lake bottom towards the core base showing some characteristic anomalies. These signatures were tested as an environmental magnetic parameter against the lithological diversity (silici-clastic, total organic matter and carbonate), metal enrichments with larger variations (Pb, Mn, Zn, Ni, Co, Cr, U and Al) and probable hydrocarbon contamination. Mineral assemblage was determined by a computer driven X-ray diffractometer. The heavy metal concentrations and total petroleum hydrocarbons (TPH) were measured by ICP-MS and UVF spectrometry, respectively. Magnetic susceptibility shows slightly higher values in interlayers containing higher silici-clastic material and organic content which may suggest first-order changes in the relative supplies of terrigenous and biogenic materials. On the basis of cluster analyses, enhanced magnetic signals could be correlated with the elevated concentrations of Co, Zn, U, Pb and TPH along the cores. The Pb concentrations at the upper parts of the cores were higher than the "Severe Effect Level" and could pose a potential risk for living organisms. Greater amounts of organic carbon tend to accumulate in muddy sediments. In fact, there are a few studies reporting some relationship between enhanced magnetic signals and organic contamination mainly due to petroleum aromatic hydrocarbons. In conclusion, the magnetic susceptibility changes in sedimentary depositional environments could be used as a rapid and cost-effective tool in identification of silici-clastic content, enrichment of some metals (iron cycling and bacterial activity) and increased TPH concentrations in hydrocarbon contaminated sediments along the cores.

Distribution of polycyclic aromatic hydrocarbons in the food web of a high mountain lake, Pyrenees, Catalonia, Spain.

PubMed

Vives, Ingrid; Grimalt, Joan O; Ventura, Marc; Catalan, Jordi

2005-06-01

We investigated the contents of polycyclic aromatic hydrocarbons (PAHs) in the food web organisms included in the diet of brown trout from a remote mountain lake. The preferential habitat and trophic level of the component species have been assessed from the signature of stable isotopes (delta13C and delta15N). Subsequently, the patterns of accumulation and transformation of these hydrocarbons in the food chain have been elucidated. Most of the food web organisms exhibit PAH distributions largely dominated by phenanthrene, which agrees with its predominance in atmospheric deposition, water, and suspended particles. Total PAH levels are higher in the organisms from the littoral habitat than from the deep sediments or the pelagic water column. However, organisms from deep sediments exhibit higher proportions of higher molecular weight PAH than those in other lake areas. Distinct organisms exhibit specific features in their relative PAH composition that point to different capacities for uptake and metabolic degradation. Brown trout show an elevated capacity for metabolic degradation because they have lower PAH concentrations than food and they are enriched strongly in lower molecular weight compounds. The PAH levels in trout highly depend on organisms living in the littoral areas. Fish exposure to PAH, therefore, may vary from lake to lake according to the relative contribution of littoral organisms to their diet.

Stream-sediment geochemistry in mining-impacted streams: Prichard, Eagle, and Beaver creeks, northern Coeur d'Alene Mining District, northern Idaho

USGS Publications Warehouse

Box, Stephen E.; Wallis, John C.; Briggs, Paul H.; Brown, Zoe Ann

2005-01-01

This report presents the results of one aspect of an integrated watershed-characterization study that was undertaken to assess the impacts of historical mining and milling of silver-lead-zinc ores on water and sediment composition and on aquatic biota in streams draining the northern part of the Coeur d?Alene Mining District in northern Idaho. We present the results of chemical analyses of 62 samples of streambed sediment, 19 samples of suspended sediment, 23 samples of streambank soil, and 29 samples of mine- and mill-related artificial- fill material collected from the drainages of Prichard, Eagle, and Beaver Creeks, all tributaries to the North Fork of the Coeur d?Alene River. All samples were sieved into three grain-size fractions (<0.063, 0.063?0.25, and 0.25?1.0 mm) and analyzed for 40 elements after four-acid digestion by inductively coupled plasma atomic-emission spectrometry and for mercury by continuous- flow cold-vapor atomic-absorption spectrometry in the U.S. Geological Survey laboratory in Denver, Colo. Historical mining of silver-lead-zinc ores in the headwater reaches of the Prichard Creek, Eagle Creek, and Beaver Creek drainages has resulted in enrichments of lead, zinc, mercury, arsenic, cadmium, silver, copper, cobalt, and, to a lesser extent, iron and manganese in streambed sediment. Using samples collected from the relatively unimpacted West Fork of Eagle Creek as representative of background compositions, streambed sediment in the vicinity of the mines and millsites has Pb and Zn contents of 20 to 100 times background values, decreasing to 2 to 5 times background values at the mouth of the each stream, 15 to 20 km downstream. Lesser enrichments (<10 times background values) of mercury and arsenic also are generally associated with, and decrease downstream from, historical silver-lead-zinc mining in the drainages. However, enrichments of arsenic and, to a lesser extent, mercury also are areally associated with the lode gold deposits along Prichard Creek near Murray, which were not studied here. Metal contents in samples of unfractionated suspended sediment collected during a high-flow event in April 2000 are generally similar to, but slightly higher than, those in the fine (<0.063- mm grain size) fraction of streambed sediment from the same sampling site. Although metal enrichment in streambed sediment typically begins adjacent to the mine portals and their associated mine-waste rock dumps, volumetrically larger inputs of metal-enriched materials were contributed by the ore-concentration millsites and their associated, more finely ground, more metal rich mill-tailings impoundments.

Stable carbon isotope fractionation during bacterial acetylene fermentation: Potential for life detection in hydrocarbon-rich volatiles of icy planet(oid)s

USGS Publications Warehouse

Miller, Laurence; Baesman, Shaun; Oremland, Ron

2015-01-01

We report the first study of stable carbon isotope fractionation during microbial fermentation of acetylene (C2H2) in sediments, sediment enrichments, and bacterial cultures. Kinetic isotope effects (KIEs) averaged 3.7 ± 0.5‰ for slurries prepared with sediment collected at an intertidal mudflat in San Francisco Bay and 2.7 ± 0.2‰ for a pure culture of Pelobacter sp. isolated from these sediments. A similar KIE of 1.8 ± 0.7‰ was obtained for methanogenic enrichments derived from sediment collected at freshwater Searsville Lake, California. However, C2H2 uptake by a highly enriched mixed culture (strain SV7) obtained from Searsville Lake sediments resulted in a larger KIE of 9.0 ± 0.7‰. These are modest KIEs when compared with fractionation observed during oxidation of C1 compounds such as methane and methyl halides but are comparable to results obtained with other C2compounds. These observations may be useful in distinguishing biologically active processes operating at distant locales in the Solar System where C2H2 is present. These locales include the surface of Saturn's largest moon Titan and the vaporous water- and hydrocarbon-rich jets emanating from Enceladus.

Mercury transformations in resuspended contaminated sediment controlled by redox conditions, chemical speciation and sources of organic matter

NASA Astrophysics Data System (ADS)

Zhu, Wei; Song, Yu; Adediran, Gbotemi A.; Jiang, Tao; Reis, Ana T.; Pereira, Eduarda; Skyllberg, Ulf; Björn, Erik

2018-01-01

Mercury (Hg) contaminated sediments can be significant sources of Hg in aquatic ecosystems and, through re-emission processes, to the atmosphere. Transformation and release of Hg may be enhanced by various sediment perturbation processes, and controlling biogeochemical factors largely remain unclear. We investigated how rates of Hg transformations in pulp-fiber enriched sediment contaminated by Hg from chlor-alkali industry were controlled by (i) transient redox-changes in sulfur and iron chemistry, (ii) the chemical speciation and solubility of Hg, and (iii) the sources and characteristics of organic matter (OM). Sediment-bottom water microcosm systems were exposed to four combinations of air and nitrogen gas for a total time of 24 h. The treatments were: 24 h N2, 0.5 h air + 23.5 h N2, 4 h air + 20 h N2 and 24 h of air exposure. As a result of these treatments, microcosms spanned a wide range of redox potential, as reflected by the dissolved sulfide concentration range of ≤0.3-97 μM. Four different chemical species of inorganic divalent Hg (HgII) and methyl mercury (MeHg), enriched in different Hg isotope tracers, were added to the microcosms: 201Hg(NO3)2(aq), 202HgII adsorbed to OM (202HgII-OM(ads)), 198HgII as microcrystalline metacinnabar (β-198HgS(s)) and Me204HgCl(aq). Microcosm systems were composed of bottom water mixed with sediment taken at 0-2, 0-5 and 0-10 cm depth intervals. The composition of OM varied with sediment depth such that compared to deeper sediment, the 0-2 cm depth-interval had a 2-fold higher contribution of labile OM originating from algal and terrestrial inputs, serving as metabolic electron-donors for microorganisms. The potential methylation rate constant (kmeth) of Hg tracers and net formation of ambient MeHg (MeHg/THg molar ratio) increased up to 50% and 400%, respectively at intermediate oxidative conditions, likely because of an observed 2-fold increase in sulfate concentration stimulating the activity of sulfate reducing bacteria with a capability of methylating HgII. Due to differences in HgII water-sediment partitioning, kmeth varied by a factor of 11-70 for the different isotope-enriched Hg tracers. The chemical form of HgII was a major controlling factor for kmeth and its response to the resuspension-oxidation of the system. The β-198HgS(s) tracer had the lowest kmeth and it was mainly constrained by redox-driven HgII solubility. The 202HgII-OM(ads) tracer showed an intermediate value on kmeth. It was controlled by both HgII solubility and availability of electron donors and acceptors, regulating bacterial activity. The 201Hg(NO3)2(aq) tracer had the highest value on kmeth which was limited mainly by bacterial activity. The kmeth was up to a factor of 3 higher in the 0-2 cm sediment depth-interval than in 0-5 and 0-10 cm intervals due to a larger contribution of labile OM in the 0-2 cm sediment. Reduction of HgII to Hg0 followed by volatilization exclusively occurred at high sulfidic conditions in the top 0-2 cm sediment. Aromatic moieties of terrestrial OM, present mainly in the top sediment, is suggested to control the reduction of HgII. The Hg0 volatilization rate constant for the 202HgII-OM(ads) tracer exceeded that for β-198HgS(s) by one order of magnitude. Our results suggest that contaminated sediments posing a high risk for reactivation of legacy Hg following transient redox resuspension events are characterized by depletion of sulfate in the sediment porewater prior to resuspension, predominance of HgII species with solubility exceeding that of crystalline β-HgS(s), and conditions promoting in situ formation and/or import of labile OM from algal and terrestrial sources.

Culturing of the first 37:4 predominant lacustrine haptophyte: Geochemical, biochemical, and genetic implications

NASA Astrophysics Data System (ADS)

Toney, Jaime L.; Theroux, Susanna; Andersen, Robert A.; Coleman, Annette; Amaral-Zettler, Linda; Huang, Yongsong

2012-02-01

Long chain alkenones (LCAs) are potential biomarkers for quantitative paleotemperature reconstructions from lacustrine environments. However, progress in this area has been hindered, because the conditions necessary for the growth of haptophytes responsible for alkenone distributions in lake sediments: the predominance of C 37:4 LCA are not known. Here we report the first enrichment culturing of a novel haptophyte phylotype (Hap-A) from Lake George, ND that produces predominantly C 37:4-LCA. Hap-A was enriched from its resting phase collected from deep sediments rather than from water column samples. In contrast, enrichments from near surface water yielded a different haptophyte phylotype (Hap-B), closely related to Chrysotila lamellosa and Pseudoisochrysis paradoxa, which does not display C 37:4-LCA predominance (similar enrichments have been reported previously). The LCA profile in sediments resembles that of enrichments containing Hap-A, suggesting that Hap-A is the dominant alkenone producer of the sedimentary LCAs. In enrichments, increased lighting appeared to be crucial for triggering alkenone production. Both U37K and U38K indices show a promising, positive relationship with temperature for Hap-A in enrichments, but the offset from the environmental calibration suggests that other factors (e.g., the growth stage or nutrients) may influence the absolute U37K value. Based on 18S rRNA gene analyses, several lakes from the Northern Great Plains, as well as Pyramid Lake, NV and Tso Ur, Tibetan Plateau, China contain the same two haptophyte phylotypes. Analysis of surface sediment from the Great Plains lakes show the Hap-A-type LCA distribution, whereas Pyramid and Tso Ur show the Hap-B type distribution. Waters of the Great Plain lakes are dominated by sulfate ions, whereas those Pyramid and Tso Ur are dominated by carbonate ions, suggesting that the sulfate to carbonate ratio may be a determining factor for the dominance of the Hap-A and Hap-B phylotypes in natural settings.

The legacy of lead (Pb) in fluvial bed sediments of an urban drainage basin, Oahu, Hawaii.

PubMed

Hotton, Veronica K; Sutherland, Ross A

2016-03-01

The study of fluvial bed sediments is essential for deciphering the impact of anthropogenic activities on water quality and drainage basin integrity. In this study, a systematic sampling design was employed to characterize the spatial variation of lead (Pb) concentrations in bed sediment of urban streams in the Palolo drainage basin, southeastern Oahu, Hawaii. Potentially bioavailable Pb was assessed with a dilute 0.5 N HCl extraction of the <63 μm grain-size fraction from the upper bed sediment layer of 169 samples from Palolo, Pukele, and Waiomao streams. Contamination of bed sediments was associated with the direct transport of legacy Pb from the leaded gasoline era to stream channels via a dense network of storm drains linked to road surfaces throughout the basin. The Palolo Stream had the highest median Pb concentration (134 mg/kg), and the greatest road and storm drain densities, the greatest population, and the most vehicle numbers. Lower median Pb concentrations were associated with the less impacted Pukele Stream (24 mg/kg), and Waiomao Stream (7 mg/kg). The median Pb enrichment ratio values followed the sequence of Palolo (68) > Pukele (19) > Waiomao (8). Comparisons to sediment quality guidelines and potential toxicity estimates using a logistic regression model (LRM) indicated a significant potential risk of Palolo Stream bed sediments to bottom-dwelling organisms.

Organic carbon and nitrogen concentrations and annual organic carbon load of six selected rivers of the United States

USGS Publications Warehouse

Malcolm, R.L.; Durum, W.H.

1976-01-01

The organic carbon load during 1969-70 of each of the six rivers in this study is substantial. The 3.4-billion-kilogram (3.7-million-ton) and 47-million-kilogram (52-thousandton) annual organic carbon loads of the Mississippi River and the Brazos River (Tex.), respectively, were approximately equally distributed between dissolved and suspended phases, whereas the 725-million-kilogram (79.8-million-ton) organic load of the Missouri River was primarily in the suspended phase. The major portion of the 6.4-million-kilogram (7.3 thousand-ton) and the 19-million-kilogram (21-thousand-ton) organic carbon loads of the Sopchoppy River (Fla.) and the Neuse River (N.C.), respectively, was in the dissolved phase. DOC (dissolved organic carbon) concentrations in most rivers were usually less than 8 milligrams per litre. SOC (suspended organic carbon) concentrations fluctuated markedly with discharge, ranging between 1 and 14 percent, by weight, in sediment of most rivers. DOC concentrations were found to be independent of discharge, whereas SOC and SIC (suspended inorganic carbon) concentrations were positively correlated with discharge. Seasonal fluctuations in DOC and SOC were exhibited by the Missouri, Neuse, Ohio, and Brazos Rivers, but both SOC and DOC concentrations were relatively constant throughout the year in the Mississippi and Sopchoppy Rivers. The carbon-nitrogen ratio in the sediment phase of all river waters averaged less than 8 1 as compared with 12:1 or greater for most soils. This high nitrogen content shows a nitrogen enrichment of the stream sediment over that in adjacent soils, which suggests that different decomposition and humification processes are operating in streams than in the soils. The abundance of organic material in the dissolved and suspended phase of all river waters in this study indicate a large capacity factor for various types of organic reactivity within all streams and the quantitative importance of organic constituents in relation to the water quality of rivers and streams.

Metabolic Capabilities of Microorganisms Involved in and Associated with the Anaerobic Oxidation of Methane

PubMed Central

Wegener, Gunter; Krukenberg, Viola; Ruff, S. Emil; Kellermann, Matthias Y.; Knittel, Katrin

2016-01-01

In marine sediments the anaerobic oxidation of methane with sulfate as electron acceptor (AOM) is responsible for the removal of a major part of the greenhouse gas methane. AOM is performed by consortia of anaerobic methane-oxidizing archaea (ANME) and their specific partner bacteria. The physiology of these organisms is poorly understood, which is due to their slow growth with doubling times in the order of months and the phylogenetic diversity in natural and in vitro AOM enrichments. Here we study sediment-free long-term AOM enrichments that were cultivated from seep sediments sampled off the Italian Island Elba (20°C; hereon called E20) and from hot vents of the Guaymas Basin, Gulf of California, cultivated at 37°C (G37) or at 50°C (G50). These enrichments were dominated by consortia of ANME-2 archaea and Seep-SRB2 partner bacteria (E20) or by ANME-1, forming consortia with Seep-SRB2 bacteria (G37) or with bacteria of the HotSeep-1 cluster (G50). We investigate lipid membrane compositions as possible factors for the different temperature affinities of the different ANME clades and show autotrophy as characteristic feature for both ANME clades and their partner bacteria. Although in the absence of additional substrates methane formation was not observed, methanogenesis from methylated substrates (methanol and methylamine) could be quickly stimulated in the E20 and the G37 enrichment. Responsible for methanogenesis are archaea from the genus Methanohalophilus and Methanococcoides, which are minor community members during AOM (1–7‰ of archaeal 16S rRNA gene amplicons). In the same two cultures also sulfur disproportionation could be quickly stimulated by addition of zero-valent colloidal sulfur. The isolated partner bacteria are likewise minor community members (1–9‰ of bacterial 16S rRNA gene amplicons), whereas the dominant partner bacteria (Seep-SRB1a, Seep-SRB2, or HotSeep-1) did not grow on elemental sulfur. Our results support a functioning of AOM as syntrophic interaction of obligate methanotrophic archaea that transfer non-molecular reducing equivalents (i.e., via direct interspecies electron transfer) to obligate sulfate-reducing partner bacteria. Additional katabolic processes in these enrichments but also in sulfate methane interfaces are likely performed by minor community members. PMID:26870011

Carbon, nutrient and trace metal cycling in sandy sediments: A comparison of high-energy beaches and backbarrier tidal flats

NASA Astrophysics Data System (ADS)

Reckhardt, Anja; Beck, Melanie; Seidel, Michael; Riedel, Thomas; Wehrmann, Achim; Bartholomä, Alexander; Schnetger, Bernhard; Dittmar, Thorsten; Brumsack, Hans-Jürgen

2015-06-01

In order to evaluate the importance of coastal sandy sediments and their contribution to carbon, nutrient and metal cycling we investigated two beach sites on Spiekeroog Island, southern North Sea, Germany, and a tidal flat margin, located in Spiekeroog's backbarrier area. We also analyzed seawater and fresh groundwater on Spiekeroog Island, to better define endmember concentrations, which influence our study sites. Intertidal sandy flats and beaches are characterized by pore water advection. Seawater enters the sediment during flood and pore water drains out during ebb and at low tide. This pore water circulation leads to continuous supply of fresh organic substrate to the sediments. Remineralization products of microbial degradation processes, i.e. nutrients, and dissolved trace metals from the reduction of particulate metal oxides, are enriched in the pore water compared to open seawater concentrations. The spatial distribution of dissolved organic carbon (DOC), nutrients (PO43-, NO3-, NO2-, NH4+, Si(OH)4 and total alkalinity), trace metals (dissolved Fe and Mn) as well as sulfate suggests that the exposed beach sites are subject to relatively fast pore water advection, which leads to organic matter and oxygen replenishment. Frequent pore water exchange further leads to comparatively low nutrient concentrations. Sulfate reduction does not appear to play a major role during organic matter degradation. High nitrate concentrations indicate that redox conditions are oxic within the duneward freshwater influenced section, while ammonification, denitrification, manganese and iron reduction seem to prevail in the ammonium-dominated seawater circulation zone. In contrast, the sheltered tidal flat margin site exhibits a different sedimentology (coarser beach sands versus finer tidal flat sands) and nutrients, dissolved manganese and DOC accumulate in the pore water. Ammonium is the dominant pore water nitrogen species and intense sulfate reduction leads to the formation of sulfide, which precipitates dissolved iron as iron sulfide. These findings are due to slower advective pore water exchange in the tidal flat sediments. This study illustrates how different energy regimes affect biogeochemical cycling in intertidal permeable sediments.

Non-Destructive X-ray Computed Tomography (XCT) of Gas Hydrate Bearing Fractures in Marine Sediment

NASA Astrophysics Data System (ADS)

Oti, E.; Buchwalter, E.; Cook, A.; Crandall, D.

2017-12-01

Hydrate-filled fractures are found in many environments, both related to methane vents and constrained to lithologic layers; how hydrate filled fractures form in layered environments is not well understood. We focus on understanding hydrate origins and fracture formation by examining hydrate-bearing fractures in conventional cores taken from Gulf of Mexico sites from JIP Leg 1 and UT-GOM, Keathley Canyon 151. There are two main methane sources available for hydrate formation. The first is the hydrocarbon reservoir underlying the Gulf sediments. This reservoir formed when deeply buried organic matter of high molecular weight was exposed to high temperature and pressures and degraded. A second source is the biogenesis of organic material, which occurs when microbial activity breaks down organic materials. Biogenic methane is more enriched in lighter carbon isotopes as the reduction or fermentation reactions preferentially consume lighter carbon isotopes. As a result, we hypothesize that sediment surrounding biogenically derived methane will have heavier carbon isotopes when compared to non-host sediment, due to the consumption of the lighter carbon isotopes during methanogenesis. We use non-destructive X-ray Computed Tomography (XCT) scanning to visualize and identify hydrate-bearing fractures. The presence of hydrate fractures is further confirmed with a salinity analysis, as hydrate dissociation freshens the pore water and lowers the salinity. After hydrate fracture location is inferred, carbon isotope analysis is used to identify hydrocarbon source. XCT scans of Keathley Canyon core JIP-1 17H-4 revealed 10 total fractures, five of which XCT and salinity analysis indicated as formerly containing hydrate. All ten fractures, in addition to background sediment, underwent a carbon isotope analysis in which organic isotopes were measured. In the background sediment and the non hydrate-bearing fractures, DOC values were relatively light, with dC13 percentages ranging from -27.8% to -30.8%. In the five hydrate fracture regions, DOC was comparatively heavy, with DOC dC13 values ranging from -23.2% to -30.3%. These values suggest that biogenic methane was formed adjacent to the fracture and likely migrated into the hydrate filled fracture.

Copper in the sediment and sea surface microlayer near a fallowed, open-net fish farm.

PubMed

Loucks, Ronald H; Smith, Ruth E; Fisher, Clyde V; Fisher, E Brian

2012-09-01

Sediment and sea surface microlayer samples near an open-net salmon farm in Nova Scotia, were analysed for copper. Copper is a constituent of the feed and is an active ingredient of anti-foulants. The salmon farm was placed in fallow after 15 years of production. Sampling was pursued over 27 months. Elevated copper concentrations in the sediments indicated the farm site as a source. Bubble flotation due to gas-emitting sediments from eutrophication is a likely process for accumulating copper in the sea surface microlayer at enriched concentrations. Elevated and enriched concentrations in the sea surface microlayer over distance from the farm site led, as a result of wind-drift, to an enlarged farm footprint. The levels of copper in both sediments and sea surface microlayer exceeded guidelines for protection of marine life. Over the 27 months period, copper levels persisted in the sediments and decreased gradually in the sea surface microlayer. Copyright © 2012 Elsevier Ltd. All rights reserved.

Multivariate analysis of heavy metal contents in soils, sediments and water in the region of Meknes (central Morocco).

PubMed

Tahri, M; Benyaïch, F; Bounakhla, M; Bilal, E; Gruffat, J J; Moutte, J; Garcia, D

2005-03-01

Concentrations of Al, Fe, Cr, Cu, Ni, Pb and Zn in soils, sediments and water samples collected along the Oued Boufekrane river (Meknes, central Morocco) were determined. In soils, a homogeneous distribution of metal concentrations was observed throughout the study area except for Pb, which presents high enrichment at sites located at the vicinity of a main highway. In sediments, high enrichment, with respect to upstream sites, were observed downstream of the city of Meknes for Al, Cr, Fe and Ni and inside the city for Cu, Zn and Pb. In water samples, the metal contents showed to correlate with their homologues in sediments suggesting that the metal contents in water and sediments have identical origins. Descriptive statistics and multivariate analysis (principal factor method, PFM) were used to assist the interpretation of elemental data. This allowed the determination of the correlations between the metals and the identification of three main factor loadings controlling the metal variability in soils and sediments.

Bioaccumulation and biotransformation of arsenic compounds in Hediste diversicolor (Muller 1776) after exposure to spiked sediments.

PubMed

Gaion, Andrea; Sartori, Davide; Scuderi, Alice; Fattorini, Daniele

2014-05-01

This study focused on the exposure of the common ragworm Hediste diversicolor (Müller 1776) to sediments enriched with different arsenic compounds, namely arsenate, dimethyl-arsinate, and arsenobetaine. Speciation analysis was carried out on both the spiked sediments and the exposed polychaetes in order to investigate H. diversicolor capability of arsenic bioaccumulation and biotransformation. Two levels of contamination (acute and moderate dose) were chosen for enriched sediments to investigate possible differences in the arsenic bioaccumulation patterns. The highest value of arsenic in tissues was reached after 15 days of exposure to dimethyl-arsinate (acute dose) spiked sediment (1,172 ± 176 μg/g). A significant increase was also obtained in worms exposed both to arsenate and arsenobetaine. Speciation analysis showed that trimethyl-arsine oxide was the predominant chemical form in tissues of H. diversicolor exposed to all the spiked sediments, confirming the importance of this intermediate in biological transformation of arsenic.

Microbes, Minerals and Electrodes at the Sanford Underground Research Facility (SURF): Electrochemistry 4100 ft below the surface.

NASA Astrophysics Data System (ADS)

Rowe, A. R.; Abuyen, K.; Casar, C. P.; Osburn, M. R.; Kruger, B.; El-Naggar, M.; Amend, J.

2017-12-01

Little is known about the importance of mineral oxidation processes in subsurface environments. This stems, in part from our limited insight into the biochemistry of many of these metabolisms, especially where redox interactions with solid surfaces is concerned. To this aim, we have been developing electrochemical cultivation techniques, to target enrichment and isolation of microbes capable of oxidative extracellular electron transfer (oxEET)—transfer of electrons from the exterior of the cell to the interior. Our previous worked focused on marine sediments; using an electrode poised at a given redox potential to isolate mineral-oxidizing microbes. Electrode oxidizing microbes isolated from these enrichments belong to the genera Thioclava, Marinobacter, Halomonas, Idiomarina, Thalassospira, and Pseudamonas; organisms commonly detected in marine and deep sea sediments but not generally associated with mineral, sulfur and/or iron oxidation. At the Sanford Underground Research Facility (SURF) in Leed, South Dakota, we have been utilizing similar electrocultivation techniques to understand: 1) the potential for mineral oxidation by subsurface microbes, 2) their selective colonization on mineral vs. electrode surfaces, as well as 3) the community composition of microbes capable of these metabolic interactions. An electrochemical and mineral enrichment scheme was designed and installed into a sulfidic groundwater flow, located at the 4100 ft level of the former gold mine. The communities enriched on electrodes (graphite and indium tin oxide coated glass) and minerals (sulfur, pyrite, and schists from the location) were compared to the long-term ground water microbial community observed. Ultimately, these observations will help inform the potential activity of a lithotrophic microbes in situ and will in turn guide our culturing efforts.

Organic contaminants, trace and major elements, and nutrients in water and sediment sampled in response to the Deepwater Horizon oil spill

USGS Publications Warehouse

Nowell, Lisa H.; Ludtke, Amy S.; Mueller, David K.; Scott, Jonathon C.

2012-01-01

Beach water and sediment samples were collected along the Gulf of Mexico coast to assess differences in contaminant concentrations before and after landfall of Macondo-1 well oil released into the Gulf of Mexico from the sinking of the British Petroleum Corporation's Deepwater Horizon drilling platform. Samples were collected at 70 coastal sites between May 7 and July 7, 2010, to document baseline, or "pre-landfall" conditions. A subset of 48 sites was resampled during October 4 to 14, 2010, after oil had made landfall on the Gulf of Mexico coast, called the "post-landfall" sampling period, to determine if actionable concentrations of oil were present along shorelines. Few organic contaminants were detected in water; their detection frequencies generally were low and similar in pre-landfall and post-landfall samples. Only one organic contaminant--toluene--had significantly higher concentrations in post-landfall than pre-landfall water samples. No water samples exceeded any human-health benchmarks, and only one post-landfall water sample exceeded an aquatic-life benchmark--the toxic-unit benchmark for polycyclic aromatic hydrocarbons (PAH) mixtures. In sediment, concentrations of 3 parent PAHs and 17 alkylated PAH groups were significantly higher in post-landfall samples than pre-landfall samples. One pre-landfall sample from Texas exceeded the sediment toxic-unit benchmark for PAH mixtures; this site was not sampled during the post-landfall period. Empirical upper screening-value benchmarks for PAHs in sediment were exceeded at 37 percent of post-landfall samples and 22 percent of pre-landfall samples, but there was no significant difference in the proportion of samples exceeding benchmarks between paired pre-landfall and post-landfall samples. Seven sites had the largest concentration differences between post-landfall and pre-landfall samples for 15 alkylated PAHs. Five of these seven sites, located in Louisiana, Mississippi, and Alabama, had diagnostic geochemical evidence of Macondo-1 oil in post-landfall sediments and tarballs. For trace and major elements in water, analytical reporting levels for several elements were high and variable. No human-health benchmarks were exceeded, although these were available for only two elements. Aquatic-life benchmarks for trace elements were exceeded in 47 percent of water samples overall. The elements responsible for the most exceedances in post-landfall samples were boron, copper, and manganese. Benchmark exceedances in water could be substantially underestimated because some samples had reporting levels higher than the applicable benchmarks (such as cobalt, copper, lead and zinc) and some elements (such as boron and vanadium) were analyzed in samples from only one sampling period. For trace elements in whole sediment, empirical upper screening-value benchmarks were exceeded in 57 percent of post-landfall samples and 40 percent of pre-landfall samples, but there was no significant difference in the proportion of samples exceeding benchmarks between paired pre-landfall and post-landfall samples. Benchmark exceedance frequencies could be conservatively high because they are based on measurements of total trace-element concentrations in sediment. In the less than 63-micrometer sediment fraction, one or more trace or major elements were anthropogenically enriched relative to national baseline values for U.S. streams for all sediment samples except one. Sixteen percent of sediment samples exceeded upper screening-value benchmarks for, and were enriched in, one or more of the following elements: barium, vanadium, aluminum, manganese, arsenic, chromium, and cobalt. These samples were evenly divided between the sampling periods. Aquatic-life benchmarks were frequently exceeded along the Gulf of Mexico coast by trace elements in both water and sediment and by PAHs in sediment. For the most part, however, significant differences between pre-landfall and post-landfall samples were limited to concentrations of PAHs in sediment. At five sites along the coast, the higher post-landfall concentrations of PAHs were associated with diagnostic geochemical evidence of Deepwater Horizon Macondo-1 oil.

Formation and preservation of greigite (Fe3S4) in a thick sediment layer from the central South Yellow Sea

NASA Astrophysics Data System (ADS)

Liu, Jianxing; Mei, Xi; Shi, Xuefa; Liu, Qingsong; Liu, Yanguang; Ge, Shulan

2018-04-01

Sediments from continental shelves are sensitive to changes in both oceanic and terrestrial conditions, and, therefore, magnetic minerals in such sediments are affected strongly by depositional and diagenetic processes. Here, we investigated systematically an N-S transect of three sediment cores from the central South Yellow Sea (SYS) muddy area. Magnetic data indicate the presence of a horizontally distributed thick greigite-bearing layer. From an age model based on published magnetostratigraphy, accelerator mass spectrometry 14C dating ages, sedimentary characteristics and foraminiferal analysis, this layer was deposited within marine isotope stages (MIS) 17-13, following an enhanced sulphidic period over MIS 21-19 when the YS Warm Current and the associated YS Cold Water Mass were strong and where underlying sediments have higher total organic carbon, total sulphur and trace element molybdenum contents. Trace element cadmium enrichment in the greigite-bearing layers is documented for the first time, which indicates that weakly sulphidic (i.e. with trace levels of free H2S) conditions existed before greigite formed in a sulphidic environment during early diagenesis. It also indicates that subsequent conditions free of oxygen and H2S after greigite formation are more favourable for its preservation. We propose that organic matter supply was controlled over an extended period by moderate primary productivity. The combined effects of palaeoclimate and local tectonic subsidence were crucial for the formation and preservation of the identified greigite. In brief, our study improves understanding of the formation and preservation mechanisms of greigite in continental shelf sediments and reveals mid-Pleistocene palaeoenvironmental changes in the SYS.

Evaluation of toxicity of polluted marine sediments from Bahia Salina Cruz, Mexico.

PubMed

Gonzalez-Lozano, Maria Cristina; Mendez-Rodriguez, Lia C; Maeda-Martinez, Alejandro M; Murugan, Gopal; Vazquez-Botello, Alfonso

2010-01-01

Bahia Salina Cruz, Oaxaca, Mexico is a major center of oil and refined product distribution on the Mexican Pacific coast. From the start of oil industry operations in 1979, negative effects from discharges of treated effluents in the bay have been a constant concern for local communities. We analyzed 28 surface sediment samples obtained in June, 2002 to evaluate the level of toxicity in the littoral zone, port-harbor, and La Ventosa estuary in Bahia Salina Cruz. The extractable organic matter concentration was high (1,213 to 7,505 micro g g(-1)) in 5 of 7 stations from the port and harbor, whereas it was low in 12 of 16 stations in the littoral zone (36 to 98 micro g g(-1)). The total aromatic hydrocarbon concentration was highest (57 to 142 micro g g(-1)) in the port and harbor compared to the La Ventosa estuary and the littoral zone. Among the heavy metals analyzed, cadmium exceeded the effects range-low values associated with adverse biological effects. The geo-accumulation index of sediments was moderate to strong contamination at 5 stations in the nonlittoral and 6 stations in the littoral zone. The enrichment of lead, zinc, and cadmium at 5 stations from the littoral, port, and harbor suggest that these metals are of anthropogenic origin. Bioassay tests of elutriates of sediments on nauplii of Artemia franciscana and Artemia sp. showed that the port and harbor were more toxic than the La Ventosa estuary and the coastal zone. The Microtox test (Vibrio fischeri) did not show a similar response with the solid phase of the sediments. The results of this study indicate that the high levels of organic content and metals in the sediments of port-harbor and the La Ventosa estuary are mainly caused by anthropogenic activities.

Measurements of mercury methylation rates and bioavailability in the Allequash Creek Wetland, Northern Wisconsin

NASA Astrophysics Data System (ADS)

Creswell, J. E.; Babiarz, C. L.; Shafer, M. M.; Armstrong, D. E.

2008-12-01

Wetlands are known to be hot spots for the production of methylmercury (MeHg) and subsequent export into other aquatic ecosystems. Because MeHg is a bioaccumulative neurotoxin, and because the primary route of human exposure to mercury is through the consumption of contaminated fish, understanding the processes by which MeHg is produced in the aquatic environment is important to the protection of human health. Inorganic Hg(II) is known to be methylated by bacteria in the anoxic zones of wetland sediments, but bioavailability plays a role in this process, as certain chemical complexes of mercury are unavailable to the microbial community. In the Allequash Creek wetland, a strong relationship has been observed between MeHg and Dissolved Organic Carbon (DOC) concentrations, but the observed relationship between MeHg and total Hg is weak. This observation implicates factors other than Hg(II) concentration as drivers of methylation. In this study, depth-resolved estimates of the bioavailability of inorganic Hg(II) were made by measuring the net mercury methylation rate potential in the hyporheic zone of the wetland. Gross mercury methylation was measured in sediment cores amended with stable isotope-enriched Hg(II), by analyzing isotopically-enriched methylmercury produced during an incubation. Demethylation was measured by amending replicate cores with stable isotope-enriched methylmercury and analyzing the amount consumed over the incubation period. Analyses were conducted using an inductively coupled plasma-quadrupole mass spectrometer. A method comparison was made between incubating cores intact, with mercury amendments injected through core tube walls, and incubating sectioned cores, with mercury amendments mixed into homogenized sediments. The value of incubating intact cores is that disturbance to the sediment and the microbial community is minimized, resulting in experimental conditions that more accurately mimic in situ conditions. The value of mixing mercury amendments into homogenized sediments is that this spreads the amended mercury throughout the core section, avoiding injection channel effects. The influence of Hg(II) speciation on methylation is also being examined. Preliminary results show gross mercury methylation occurring at both sites sampled, although net methylation is negative throughout most of the depth profile, suggesting that the chemical conditions controlling the bioavailability of Hg(II) are highly variable. Because this is the first time such measurements have been made in this system, these data provide an important baseline for future studies of mercury bioavailability in northern wetlands.

TIE METHODS FOR TOXICITY EVALUATION OF FRESHWATER SEDIMENTS

EPA Science Inventory

Three toxicity identification evaluation (TIE) methods, AVS spiking, zero-valent metal and cation exchange resin, have been used with metal contaminated and enriched sediments to remove the toxicity...

Autigenic and Anthropogenic Uranium in the Marine Sediments of the Gulf of California in Front of Santa Rosalia Mining District

NASA Astrophysics Data System (ADS)

Choumiline, K.; Rodríguez-Figueroa, G.; Shumilin, E.; Sapozhnikov, D.

2007-05-01

To verify the possibilities of U enrichments in the marine sedimentary environment of the eastern sector of the central Gulf of Califoria (GC), eleven sediment cores were collected in front of the Santa Rosalia mining region, peninsula of Baja California. Uranium and some other trace element contents in sliced core layers, dried and homogenized, were determined using instrumental neutron activation analysis. Average total U contents in sediments of five cores collected in the open GC in front of Santa Rosalía at sites with water depths from 265 m to 1030 m and in the Guaymas Basin with 2019 m, ranged from 1.36±0.26 mg kg-1 (Guaymas Basin) to 9.31±3.03 mg kg-1 (SR63 core, depth 630 m). To distinguish non-lithogenic U from the lithogenic one, the normalization of total U contents to the concentrations of Sc in the samples was used. That because this element is a reliable indicator of crustal materials, mainly aluminosilicates in the marine sediments. The relative contribution of non-lithogenic (authigenic) U varied from 49.8±3 % (Guaymas Basin) to 84.2±8.2 % (SR62 core) of the total U content in the sediments of the open central GC. Surprisingly, in three sediment cores from the coastal zone adjacent to the town of Santa Rosalía in water depth range 3-6 m very high concentrations of total U were found, ranging from 54.2±7.3 mg kg-1 (SR4 core) to 110±13 mg kg-1 (SR2 core) and exceeding not only U average abundance in the earth´s crust (2.7 mg kg-1), but also its levels found for SR62 core, as well as those reported for natural enrichments of U in suboxic-anoxic environments, e.g. at Mexico and Peru margin sites (3.04 mg kg-1 - 24.54 mg kg-1, McManus et al., 2006). The relative contribution of non-lithogenic U in the sediments of these three anomalous cores varied from 97.2±0.4 % (SR4 core) to 98.80.2 % (SR1 and SR2 cores) of their total U content. The sediments were also depleted in organic C (0.05 % - 0.18 %), which is not typical for marine solid phases enriched in authigenic U. Additional surface sampling around the cores with high levels of U, helped to define the spatial distribution of this element, as well as Co, Cu, Zn, light lanthanides and europium, which also showed "anomalies". The association with anthropogenic impact is discussed because the geochemical fingerprints of these sediments are the same as for solid wastes of copper smelting, which has occurred in Santa Rosalía in the past century till 1984.

Ligand extraction of rare earth elements from aquifer sediments: Implications for rare earth element complexation with organic matter in natural waters

NASA Astrophysics Data System (ADS)

Tang, Jianwu; Johannesson, Karen H.

2010-12-01

The ability of organic matter as well as carbonate ions to extract rare earth elements (REEs) from sandy sediments of a Coastal Plain aquifer was investigated for unpurified organic matter from different sources (i.e., Mississippi River natural organic matter, Aldrich humic acid, Nordic aquatic fulvic acid, Suwannee River fulvic acid, and Suwannee River natural organic matter) and for extraction solutions containing weak (i.e., CH 3COO -) or strong (i.e., CO32-) ligands. The experimental results indicate that, in the absence of strong REE complexing ligands in solution, the amount of REEs released from the sand is small and the fractionation pattern of the released REEs appears to be controlled by the surface stability constants for REE sorption with Fe(III) oxides/oxyhydroxides. In the presence of strong solution complexing ligands, however, the amount and the fractionation pattern of the released REEs reflect the strength and variation of the stability constants of the dominant aqueous REE species across the REE series. The varying amount of REEs extracted by the different organic matter employed in the experiments indicates that organic matter from different sources has different complexing capacity for REEs. However, the fractionation pattern of REEs extracted by the various organic matter used in our experiments is remarkable consistent, being independent of the source and the concentration of organic matter used, as well as solution pH. Because natural aquifer sand and unpurified organic matter were used in our experiments, our experimental conditions are more broadly similar to natural systems than many previous laboratory experiments of REE-humic complexation that employed purified humic substances. Our results suggest that the REE loading effect on REE-humic complexation is negligible in natural waters as more abundant metal cations (e.g., Fe, Al) out-compete REEs for strong binding sites on organic matter. More specifically, our results indicate that REE complexation with organic matter in natural waters is dominated by REE binding to weak sites on dissolved organic matter, which subsequently leads to a middle REE (MREE: Sm-Ho)-enriched fractionation pattern. The experiments also indicate that carbonate ions may effectively compete with fulvic acid in binding with dissolved REEs, but cannot out compete humic acids for REEs. Therefore, in natural waters where low molecular weight (LMW) dissolved organic carbon (DOC) is the predominant form of DOC (e.g., lower Mississippi River water), REEs occur as "truly" dissolved species by complexing with carbonate ions as well as FA, resulting in heavy REE (HREE: Er-Lu)-enriched shale-normalized fractionation patterns. Whereas, in natural terrestrial waters where REE speciation is dominated by organic complexes with high molecular weight DOC (e.g., "colloidal" HA), only MREE-enriched fractionation patterns will be observed because the more abundant, weak sites preferentially complex MREEs relative to HREEs and light REEs (LREEs: La-Nd).

Rare earth elements and neodymium isotopes in sedimentary organic matter

NASA Astrophysics Data System (ADS)

Freslon, Nicolas; Bayon, Germain; Toucanne, Samuel; Bermell, Sylvain; Bollinger, Claire; Chéron, Sandrine; Etoubleau, Joel; Germain, Yoan; Khripounoff, Alexis; Ponzevera, Emmanuel; Rouget, Marie-Laure

2014-09-01

We report rare earth element (REE) and neodymium (Nd) isotope data for the organic fraction of sediments collected from various depositional environments, i.e. rivers (n = 25), estuaries (n = 18), open-ocean settings (n = 15), and cold seeps (n = 12). Sedimentary organic matter (SOM) was extracted using a mixed hydrogen peroxide/nitric acid solution (20%-H2O2-0.02 M-HNO3), after removal of carbonate and oxy-hydroxide phases with dilute hydrochloric acid (0.25 M-HCl). A series of experimental tests indicate that extraction of sedimentary organic compounds using H2O2 may be complicated occasionally by partial dissolution of sulphide minerals and residual carbonates. However, this contamination is expected to be minor for REE because measured concentrations in H2O2 leachates are about two-orders of magnitude higher than in the above mentioned phases. The mean REE concentrations determined in the H2O2 leachates for samples from rivers, estuaries, coastal seas and open-ocean settings yield relatively similar levels, with ΣREE = 109 ± 86 ppm (mean ± s; n = 58). The organic fractions leached from cold seep sediments display even higher concentration levels (285 ± 150 ppm; mean ± s; n = 12). The H2O2 leachates for most sediments exhibit remarkably similar shale-normalized REE patterns, all characterized by a mid-REE enrichment compared to the other REE. This suggests that the distribution of REE in leached sedimentary organic phases is controlled primarily by biogeochemical processes, rather than by the composition of the source from which they derive (e.g. pore, river or sea-water). The Nd isotopic compositions for organic phases leached from river sediments are very similar to those for the corresponding detrital fractions. In contrast, the SOM extracted from marine sediments display εNd values that typically range between the εNd signatures for terrestrial organic matter (inferred from the analysis of the sedimentary detrital fractions) and marine organic matter (inferred from the analysis of local surface seawater). A notable exception is the case of organic matter (OM) fractions leached from cold seep sediment samples, which sometimes exhibit εNd values markedly different from both terrigenous and surface seawater signatures. This suggests that a significant fraction of organic compounds in these sediments may be derived from chemosynthetic processes, recycling pore water REE characterized by a distinct isotopic composition. Overall, our results confirm that organic matter probably plays an important role in the oceanic REE budget, through direct scavenging and remineralization within the water column. Both the high REE abundances and the shape of shale-normalized patterns for leached SOM also suggest that OM degradation in sub-surface marine sediments during early diagenesis could control, to a large extent, the distribution of REE in pore waters. Benthic fluxes of organic-bound REE could hence substantially contribute to the exchange processes between particulates and seawater that take place at ocean margins. Neodymium isotopes could provide useful information for tracing the origin (terrestrial versus marine) and geographical provenance of organic matter, with potential applications in paleoceanography. In particular, future studies should further investigate the potential of Nd isotopes in organic compounds preserved in sedimentary records for reconstructing past variations of surface ocean circulation.

Ecological risk assessment of elemental pollution in sediment from Tunku Abdul Rahman National Park, Sabah

DOE Office of Scientific and Technical Information (OSTI.GOV)

Elias, Md Suhaimi; Hamzah, Mohd Suhaimi; Rahman, Shamsiah Ab

Eleven (11) surface sediment samples were collected from Tunku Abdul Rahman National Park, Sabah. The neutron activation analysis (NAA) and inductively coupled plasma-mass spectrometry (ICP-MS) techniques were applied for the determinations metal contents and their distributions in sediment samples. The results shown that Arsenic (As) concentrations are enriched at all sampling stations except for station TAR 09, with enrichment factor (EF) values ranged from 1.1 to 7.2. The elements such as Cd, Cr, Sb and U showed enrichment at a few stations and other elements (Cr, Cu, Pb, Th, Zn) shown as background levels in all stations. Degrees of contaminationmore » in this study were calculated base on concentrations of six elements (As, Cd, Cr, Cu, Pb, and Zn). TAR 11 station can be categorized as very high degree of contamination with degree of contamination value of 43.2. TAR 07 station can be categorized as a considerable degree of contamination (contamination value of 16.9). Six stations (TAR 01, 03, 04, 05, 06, 08, 10) showed moderate degree of contamination, with contamination values ranging from 8.0 to 16.0. TAR 02 and TAR 09 stations showed low degree of contaminations (< 8.0). TAR 11 showed very high ecological risk index (R{sub I}) with RI value is 916. TAR 07 and TAR 10 showed moderate ecological risk index with R{sub I} value 263 and 213, respectively. Other stations showed low ecological risk with RI values ranging from 42.3 to 117 (< 150). Very high ecological risk index could give an adverse effect to the benthic organism. The data obtained from the enrichment factor, degree of contamination and ecological risk index provided vital information, which can be used for future comparison. Information from the present study will be useful to the relevant government agencies and authorities in preparing preventive action to control direct discharge of heavy metals from industries, agro-base activities and domestic waste to the rivers and the sea.« less

Ground-water quality in the central part of the Passaic River basin, northeastern New Jersey, 1959-88

USGS Publications Warehouse

Czarnik, T.S.; Kozinski, Jane

1994-01-01

Ground-water samples were collected from 71 wells screened in or open to three aquifers in the central part of the Passaic River basin during 1959-88. Water samples from aquifers in glacial sediments and aquifers in sedimentary and igneous bedrock of the Newark Supergroup were analyzed for major ions. Most samples were analyzed for metals, nutrients, and tritium; 38 samples were analyzed for purgeable organic compounds. Calcium and bicarbonate were the predominant ions in ground water in the study area. Ground water was dilute (median dissolved-solids concentration 239 milligrams per liter) and slightly basic (median pH 7.89). Concentrations of inorganic constituents were within U.S. Environmental Protection Agency (USEPA) primary drinking-water regulations. Concentrations of benzene, tetrachloroethylene, and trichloroethylene, however, were greater than USEPA primary drinking-water regulations in six samples. Ground-water samples from aquifers in sedimentary bedrock were enriched in barium, calcium, magnesium, strontium,and sulfate relative to samples form the other aquifers. Such ion enrichment can be attributed either to disolution of carbonate and sulfate-containing minerals or to human activities. Ground-water samples from two wells screened in glacial sediments near swamps contained sulfate in concentrations higher than the median for the aquifer. Sulfate enrichment could result from downward leaching of water enriched in sulfur from the decay of organic matter in the swamps, from the disolution of sulfate-containing minerals, or from human activities. No regional trends in the chemical composition of the ground water in the study area were identified. Sulfate concentrations in ground- water samples from the sedimentary bedrock tended to increase with decreasing altitude of the deepest opening of the well; the correlation coefficient for the ranks of sulfate concentration and the altitude of the deepest opening of the well for 17 pairs of data is -0.690. Concentrations of tritium were greater than the detection limit in 33 of 35 ground-water samples, indicating that most ground water in the study area is more recent than 1953.

Sedimentary architecture and depositional controls of a Pliocene river-dominated delta in the semi-isolated Dacian Basin, Black Sea

NASA Astrophysics Data System (ADS)

Jorissen, Elisabeth L.; de Leeuw, Arjan; van Baak, Christiaan G. C.; Mandic, Oleg; Stoica, Marius; Abels, Hemmo A.; Krijgsman, Wout

2018-06-01

Sedimentological facies models for (semi-)isolated basins are less well developed than those for marine environments, but are critical for our understanding of both present-day and ancient deltaic sediment records in restricted depositional environments. This study considers an 835 m thick sedimentary succession of mid-Pliocene age, which accumulated in the Dacian Basin, a former embayment of the Black Sea. Detailed sedimentological and palaeontological analyses reveal a regression from distal prodelta deposits with brackish water faunas to delta-top deposits with freshwater faunas. Sediments contain frequent hyperpycnal plumes and an enrichment in terrestrial organic material, ichnofossils and in situ brackish and freshwater faunas. Deltaic progradation created thin, sharply-based sand bodies formed by multiple terminal distributary channels, covering a wide depositional area. The system experienced frequent delta-lobe switching, resulting in numerous thin parasequences. Parasequences are overlain by erosive reddish oxidized sand beds, enriched in broken, abraded brackish and freshwater shells. These beds were formed after sediment starvation, on top of abandoned delta lobes during each flooding event. A robust magnetostratigraphic time frame allowed for comparison between the observed sedimentary cyclicity and the amplitude and frequency of astronomical forcing cycles. Our results indicate that parasequence frequencies are significantly higher than the number of time equivalent astronomical cycles. This suggests that delta-lobe switching was due to autogenic processes. We consider the observed facies architecture typical for a delta prograding on a low-gradient slope into a shallow, brackish, protected, semi-isolated basin. Furthermore, in the absence of significant wave and tidal influence, sediment progradation in such a protected depositional setting shaped a delta, strongly river-dominated.

Trace elements and organic contaminants in stream sediments from the Red River of the North Basin

USGS Publications Warehouse

Brigham, M.E.; Tornes, L.H.

1996-01-01

To assess the presence and distribution of a variety of hydro-phobic chemicals in streams in the Red River of the North Basin, bottom sediments were analyzed for trace elements, organochlorines, and polycyclic aromatic hydrocarbons (PAHs). Glaciolacustrine clays and carbonate minerals are common in fine sediments of the region, and can help explain the distribution of many elements. Aluminum (Al), an indicator of glaciolacustrine clay minerals, correlates strongly (r>0.75, p<0.05) with Cr, Co, Fe, La, Li, K, Sc, and Ti; and moderately (0.55

Uranium distribution in the coastal waters and pore waters of Tampa Bay, Florida

USGS Publications Warehouse

Swarzenski, P.W.; Baskaran, M.

2006-01-01

The geochemical reactivity of uranium (238U) and dissolved organic carbon (DOC), Fe, Mn, Ba, and V was investigated in the water column, pore waters, and across a river/estuarine mixing zone in Tampa Bay, Florida. This large estuary is impacted both by diverse anthropogenic activity and by extensive U-rich phosphatic deposits. Thus, the estuarine behavior of uranium may be examined relative to such known U enrichments and anthropogenic perturbations. Dissolved (< 0.45??m) uranium exhibited both removal and enrichment processes across the Alafia River/estuarine mixing zone relative to conservative mixing. Such non-conservative U behavior may be attributed to: i) physical mixing processes within the river; ii) U carrier phase reactivity; and/or iii) fluid exchange processes across sediment/water interface. In the bay proper, U concentrations were ?????2 to 3 times greater than those reported for other estuarine systems and are likely a result of erosional inputs from the extensive, underlying U-rich phosphatic deposits. Whereas dissolved U concentrations generally did not approach seawater values (13.6??nM) along the Alafia River salinity transect, water column U concentrations exceeded 16??nM in select regions of the bay. Within the hydrogeological framework of the bay, such enriched U may also be derived from advective fluid transport processes across the sediment/water interface, such as submarine groundwater discharge (SGD) or hyporheic exchange within coastal rivers. Pore water profiles of U in Tampa Bay show both a flux into and out of bottom sediments, and average, diffusive U pore water fluxes (Jdiff) ranged from - 82.0 to 116.6??mol d- 1. It is likely that negative U fluxes imply seawater entrainment or infiltration (i.e., submarine groundwater recharge), which may contribute to the removal of water column uranium. For comparison, a bay-wide, Ra-derived submarine groundwater discharge estimate for Tampa Bay (8??L m- 2 d- 1) yielded an average, advective (JSGD) U flux of 112.9??mol d- 1. In Tampa Bay, the estuarine distribution of U indicates a strong natural, geologic control that may also be influenced by enhanced fluid transport processes across the sediment/water interface. ?? 2006 Elsevier B.V. All rights reserved.

Marine sediments microbes capable of electrode oxidation as a surrogate for lithotrophic insoluble substrate metabolism.

PubMed

Rowe, Annette R; Chellamuthu, Prithiviraj; Lam, Bonita; Okamoto, Akihiro; Nealson, Kenneth H

2014-01-01

Little is known about the importance and/or mechanisms of biological mineral oxidation in sediments, partially due to the difficulties associated with culturing mineral-oxidizing microbes. We demonstrate that electrochemical enrichment is a feasible approach for isolation of microbes capable of gaining electrons from insoluble minerals. To this end we constructed sediment microcosms and incubated electrodes at various controlled redox potentials. Negative current production was observed in incubations and increased as redox potential decreased (tested -50 to -400 mV vs. Ag/AgCl). Electrode-associated biomass responded to the addition of nitrate and ferric iron as terminal electron acceptors in secondary sediment-free enrichments. Elemental sulfur, elemental iron and amorphous iron sulfide enrichments derived from electrode biomass demonstrated products indicative of sulfur or iron oxidation. The microbes isolated from these enrichments belong to the genera Halomonas, Idiomarina, Marinobacter, and Pseudomonas of the Gammaproteobacteria, and Thalassospira and Thioclava from the Alphaproteobacteria. Chronoamperometry data demonstrates sustained electrode oxidation from these isolates in the absence of alternate electron sources. Cyclic voltammetry demonstrated the variability in dominant electron transfer modes or interactions with electrodes (i.e., biofilm, planktonic or mediator facilitated) and the wide range of midpoint potentials observed for each microbe (from 8 to -295 mV vs. Ag/AgCl). The diversity of extracellular electron transfer mechanisms observed in one sediment and one redox condition, illustrates the potential importance and abundance of these interactions. This approach has promise for increasing our understanding the extent and diversity of microbe mineral interactions, as well as increasing the repository of microbes available for electrochemical applications.

Use of bromodeoxyuridine immunocapture to identify psychrotolerant phenanthrene-degrading bacteria in phenanthrene-enriched polluted Baltic Sea sediments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Edlund, A.; Jansson, J.

The aim of this study was to enrich and identify psychrotolerant phenanthrenedegrading bacteria from polluted Baltic Sea sediments. Polyaromatic hydrocarbon (PAH)-contaminated sediments were spiked with phenanthrene and incubated for 2 months in the presence of bromodeoxyuridine that is incorporated into the DNA of replicating cells. The bromodeoxyuridine-incorporated DNA was extracted by immunocapture and analyzed by terminal-restriction fragment length polymorphism and 16S rRNA gene cloning and sequencing to identify bacterial populations that were growing. In addition, degradation genes were quantified in the bromodeoxyuridine-incorporated DNA by real-time PCR. Phenanthrene concentrations decreased after 2 months of incubation in the phenanthrene-enriched sediments and thismore » reduction correlated to increases in copy numbers of xylE and phnAc dioxygenase genes. Representatives of Exiguobacterium, Schewanella,Methylomonas, Pseudomonas, Bacteroides and an uncultured Deltaproteobacterium and a Gammaproteobacterium dominated the growing community in the phenanthrene spiked sediments. Isolates that were closely related to three of these bacteria (two pseudomonads and an Exiguobacterium sp.) could reduce phenanthrene concentrations in pure cultures and they all harbored phnAc dioxygenase genes. These results confirm that this combination of culture-based and molecular approaches was useful for identification of actively growing bacterial species with a high potential for phenanthrene degradation.« less

Laboratory Determination of Molybdenum Accumulation Rates as a Measure of Hypoxic Conditions

EPA Science Inventory

Redox sensitive metals, such as molybdenum (Mo), are enriched in reducing sediments due to authigenic fixation in anoxic interstitial waters of sediments. This study tested whether the process of fixation and accumulation of Mo in sediments could provide a geochemical indicator o...

Diverse metal reduction and nano- mineral formation by metal-reducing bacteria enriched from inter-tidal flat sediments

NASA Astrophysics Data System (ADS)

Kim, Y.; Park, B.; Seo, H.; Roh, Y.

2009-12-01

Dissimilatory metal-reducing bacteria utilize diverse metal oxides as electron acceptors and couple this microbial metal reduciton to growth. However, the microbe-metal interactions playing important roles in the metal geochemistry and organic matter degradation in the tidal flat sediments have not been uncovered enough to employ in various environmental and industrial applications. The objective of this study was to examine biomineralization and bioremediation by the facultative metal-reducing bacteria isolated from the inter-tidal flat sediments in southwestern of Korea. 16S-rRNA analysis showed bacterial consortium mainly consists of genus of Clostridium sp. The enriched bacteria were capable of reducing diverse metals such as iron oxide, maganese oxide, Cr(VI) and Se(VI) during glucose fermentation process at room temperature. The bacteria reduced highly toxic and reactive elements such as Cr(VI) and Se(VI) to Cr(III) and Se(0). The results showed that microbial processes induced transformation from toxic states of heavy metals to less toxic and mobile states in natural environments. Andthe bacteria also reduced iron oxyhydroxide such as ferrihydrite and akaganeite (β-FeOOH) and formed nanometer-sized magnetite (Fe3O4). This study indicates microbial processes not only can be used for bioremediation of inorganic contaminants existing in the marine environments, but also form the magnetite nanoparticles which are exhibit superparamagnetic properties that can be useful for relevant medical and industrial applications.

Holocene environmental and climatic change in the Northern Great Plains as recorded in the geochemistry of sediments in Pickerel Lake, South Dakota

USGS Publications Warehouse

Dean, W.E.; Schwalb, A.

2000-01-01

The sediments in Pickerel Lake, northeastern South Dakota, provide a continuous record of climatic and environmental change for the last 12000 yr. Sediments deposited between 12 and 6 ka (radiocarbon) show extreme variations in composition, oxygen and carbon isotopic composition of bulk carbonate, carbon isotopic composition of organic matter, and magnetic susceptibility. These variations reflect changes in sources of moisture, regional vegetation types, precipitation-evaporation balance, ground- and surface-water influx, water residence time, erosion, lake productivity, water level, and water temperature. The total carbonate content of late Pleistocene sediments steadily increased from <20% at the base of the core to as much as 80% in sediments deposited between 11 and 9 ka. By about 8 ka, the total carbonate content of the sediments had declined to about 40% where it remained with little variation for the past 8 kyr, suggesting relatively stable conditions. There are marked increases in values of ??13C and ??18O in bulk carbonate, and ??13C of organic matter, in sediments deposited between 10 and 6 ka as evaporation increased, and the vegetation in the watershed changed from forest to prairie. This shift toward more 18O-enriched carbonate may also reflect a change in source or seasonality of precipitation. During this early Holocene interval the organic carbon (OC) content of the sediments remained relatively low (2-3%), but then increased rapidly to 4.5% between 7 and 6 ka, reflecting the rapid transition to a prairie lake. The OC content fluctuates slightly between 4 and 6% in sediments deposited over the past 6 kyr. Like OC and total carbonate, most variables measured show little variation in the 13 m of sediment deposited over the past 6 kyr, particularly when compared with early Holocene variations. Although the magnetic susceptibility of this upper 13 m of sediment is generally low (<10 SI units), the upper six meters of the section is marked by striking 1 m cycles (ca. 400-500 yr periodicity) in susceptibility. These cycles are interpreted as being due to variations in the influx of eolian detrital-clastic material. Century-scale cyclic variations in different proxy variables for aridity and eolian activity from sediments deposited over the past 2000 yr in other lakes in the northern Great Plains, as well as in sand dune activity, suggest that aridity cycles were the dominant feature of late Holocene climate of the northern Great Plains. (C) 2000 Elsevier Science Ltd and INQUA. All rights reserved.

Chemistry of Tertiary sediments in the surroundings of the Ries impact structure and moldavite formation revisited

NASA Astrophysics Data System (ADS)

Žák, Karel; Skála, Roman; Řanda, Zdeněk; Mizera, Jiří; Heissig, Kurt; Ackerman, Lukáš; Ďurišová, Jana; Jonášová, Šárka; Kameník, Jan; Magna, Tomáš

2016-04-01

Moldavites, tektites of the Central European strewn field, have been traditionally linked with the Ries impact structure in Germany. They are supposed to be derived mainly from the near-surface sediments of the Upper Freshwater Molasse of Miocene age that probably covered the target area before the impact. Comparison of the chemical composition of moldavites with that of inferred source materials requires recalculation of the composition of sediments to their water-, organic carbon- and carbon dioxide-free residuum. This recalculation reflects the fact that these compounds were lost almost completely from the target materials during their transformation to moldavites. Strong depletions in concentrations of many elements in moldavites relative to the source sediments (e.g., Mo, Cu, Ag, Sb, As, Fe) contrast with enrichments of several elements in moldavites (e.g., Cs, Ba, K, Rb). These discrepancies can be generally solved using two different approaches, either by involvement of a component of specific chemical composition, or by considering elemental fractionation during tektite formation. The proposed conceptual model of moldavite formation combines both approaches and is based on several steps: (i) the parent mixture (Upper Freshwater Molasse sediments as the dominant source) contained also a minor admixture of organic matter and soils; (ii) the most energetic part of the ejected matter was converted to vapor (plasma) and another part produced melt directly upon decompression; (iii) following further adiabatic decompression, the expanding vapor phase disintegrated the melt into small melt droplets and some elements were partially lost from the melt because of their volatility, or because of the volatility of their compounds, such as carbonyls of Fe and other transition metals (e.g., Ni, Co, Mo, Cr, and Cu); (iv) large positively charged ions such as Cs+, Ba2+, K+, Rb+ from the plasma portion were enriched in the late-stage condensation spherules or condensed directly onto negatively charged melt droplets; (v) simultaneously, the melt droplets coalesced into larger tektite bodies. Steps (iii)-(v) may have overlapped in time. The still melted moldavite bodies reaching their final size were reshaped by further melt flow. This melt flow was related to moldavite rotation and escape (bubbling off) of the last portion of gaseous volatiles during their flight in a low-pressure region above the dense layer of the atmosphere.

Watershed export of fine sediment, organic carbon, and chlorophyll-a to Chesapeake Bay: Spatial and temporal patterns in 1984-2016.

PubMed

Zhang, Qian; Blomquist, Joel D

2018-04-01

Chesapeake Bay has long experienced nutrient enrichment and water clarity deterioration. This study provides new quantification of loads and yields for sediment (fine and coarse grained), organic carbon (total, dissolved, and particulate), and chlorophyll-a from the monitored nontidal Chesapeake Bay watershed (MNTCBW), all of which are expected to drive estuarine water clarity. We conducted an integrated analysis of nine major tributaries to the Bay to understand spatial and temporal export patterns over the last thirty years (1984-2016). In terms of spatial pattern, export of these constituents from the MNTCBW was strongly dominated (~90%) by the three largest tributaries (i.e., Susquehanna, Potomac, and James). Among the nine tributaries, the ranking of constituent export generally follows the order of their watershed sizes, with other factors such as land use and reservoir playing important roles in some exceptions. In terms of partitioning, suspended sediment (SS) export was dominated by fine-grained sediment (SS fine ) in all nine tributaries; overall, ~90% of the MNTCBW SS is SS fine . Total organic carbon (TOC) export was dominated by dissolved organic carbon (DOC) in all tributaries except Potomac River; overall, ~60% of the MNTCBW TOC is DOC. A comparison with literature shows that the MNTCBW SS and TOC yields were ~80% and ~60% of the respective medians of worldwide watersheds. In terms of temporal pattern, flow-normalized yields from the MNTCBW show overall increases in SS (both long-term [1984-2016] and short-term [2004-2016]), SS fine (long-term and short-term), TOC (long-term), and chlorophyll-a (short-term). The rises in SS, SS fine , and TOC were largely driven by Susquehanna River where Conowingo Reservoir's trapping efficiency has greatly diminished in the last twenty years. Overall, these new results on the status and trends of sediment, organic carbon, and chlorophyll-a provide the foundation for building potential linkages between riverine inputs and estuarine water clarity patterns. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Distribution of PAHs and trace metals in urban stormwater sediments: combination of density fractionation, mineralogy and microanalysis.

PubMed

El-Mufleh, Amelène; Béchet, Béatrice; Basile-Doelsch, Isabelle; Geffroy-Rodier, Claude; Gaudin, Anne; Ruban, Véronique

2014-01-01

Sediment management from stormwater infiltration basins represents a real environmental and economic issue for stakeholders due to the pollution load and important tonnages of these by-products. To reduce the sediment volumes to treat, organic and metal micropollutant-bearing phases should be identified. A combination of density fractionation procedure and microanalysis techniques was used to evaluate the distribution of polycyclic aromatic hydrocarbons (PAHs) and trace metals (Cd, Cr, Cu, Ni, Pb, and Zn) within variable density fractions for three urban stormwater basin sediments. The results confirm that PAHs are found in the lightest fractions (d < 1.9, 1.9 < d < 2.3 g cm(-3)) whereas trace metals are equally distributed within the light, intermediary, and highest fractions (d < 1.9, 1.9 < d < 2.3, 2.3 < d < 2.6, and d > 2.8 g cm(-3)) and are mostly in the 2.3 < d < 2.6 g cm(-3) fraction. The characterization of the five fractions by global analyses and microanalysis techniques (XRD and MEB-EDX) allowed us to identify pollutant-bearing phases. PAHs are bound to the organic matter (OM) and trace metals to OM, clays, carbonates and dense particles. Moreover, the microanalysis study underlines that OM is the main constituent responsible for the aggregation, particularly for microaggregation. In terms of sediment management, it was shown that density fractionation is not suitable for trace metals but could be adapted to separate PAH-enriched phases.

Biogeochemistry of sediments from restricted exchange environments of Kandalaksha bay, White Sea, Russian Arctic

NASA Astrophysics Data System (ADS)

Koukina, Sofia

2010-05-01

The Arctic has come under intense scrutiny by the scientific community in recent years. The White sea of Russian Arctic is characterised by extreme diversity of enclosed estuarine systems that are often sites of unique biota. The present study focuses on the sediments of the inner part of Kandalaksha bay, adjacent to the Karelian shore of the White sea. Due to the endogenous crustal uplift (4 mm per year an average), this bay contains a continuum of shallow environments, ranging from estuaries of different types to separating basins where water exchange is severely restricted. The evolution of sediments here is caused by specific depositional conditions, which are strongly affected by small-scale hydrological and hydrodynamic processes unique for each particular area. The detrital, non-detrital (labile) and organically bound fractions of Fe, Mn, Cu, Zn, Pb, Cr, Li along with TOC, n-alkanes, granulometry and bacteria species distribution were determined in surface sediment samples from representative separating basins and small exchange environments of the Karelian shore. The sediments studied tended to be terrigenous with major input of organic matter from both terrestrial remains and autochthonous microbial sources. According to sediment quality guidelines, all trace-metal contents were below the threshold levels. The strong positive correlation between labile Fe, Mn, Cr, Zn and total Li revealed their association with Fe-hydroxides and clay minerals, while Pb and especially Cu exhibited their affinity to organic matter. The metals in sediments studied occur mainly in a biogeochemically stabile mineral-incorporated form, which comprises 77-99% of total metal content. The contents of labile form were high for Fe, Mn and Cr (up to 7.5 %) in sediments from separating basins, which are also enriched in clay fraction <0.01 mm (up to 60%), TOC (5-20%) and hydrogen sulfide. This is due to the anaerobic conditions formed in sediments in the coarse of separating process. In such environments with restricted water exchange with an open sea, from one side, and permanent organic matter input from land, from the other side, the mass extinction of marine biota with simultaneous spread of microbiota take place. Thus, in the basins studied the colonies of Thiocapsa roseopersicina and Amoebobacter sp., Microcystis sp. and Oscillatotia sp., and Beggiatoa alba (B.Gigantea) were found. The present study can serve as a basis of an environmenthal assessment of the region and objective anoxia prognosis in Arctic ecosystems.

Sulfur oxidation to sulfate coupled with electron transfer to electrodes by Desulfuromonas strain TZ1

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, T; Bain, TS; Barlett, MA

2014-01-02

Microbial oxidation of elemental sulfur with an electrode serving as the electron acceptor is of interest because this may play an important role in the recovery of electrons from sulfidic wastes and for current production in marine benthic microbial fuel cells. Enrichments initiated with a marine sediment inoculum, with elemental sulfur as the electron donor and a positively poised (+300 mV versus Ag/AgCl) anode as the electron acceptor, yielded an anode biofilm with a diversity of micro-organisms, including Thiobacillus, Sulfurimonas, Pseudomonas, Clostridium and Desulfuromonas species. Further enrichment of the anode biofilm inoculum in medium with elemental sulfur as the electronmore » donor and Fe(III) oxide as the electron acceptor, followed by isolation in solidified sulfur/Fe(III) medium yielded a strain of Desulfuromonas, designated strain TZ1. Strain TZ1 effectively oxidized elemental sulfur to sulfate with an anode serving as the sole electron acceptor, at rates faster than Desulfobulbus propionicus, the only other organism in pure culture previously shown to oxidize S with current production. The abundance of Desulfuromonas species enriched on the anodes of marine benthic fuel cells has previously been interpreted as acetate oxidation driving current production, but the results presented here suggest that sulfur-driven current production is a likely alternative.« less

Acclimation of Hydrilla verticillata to sediment anoxia in vegetation restoration in eutrophic waters.

PubMed

Wu, Juan; Dai, Yanran; Rui, Shengyang; Cui, Naxin; Zhong, Fei; Cheng, Shuiping

2015-12-01

Sediment anoxia generally results from intense organic enrichment and is a limiting factor in the restoration of vegetation in eutrophic waters. To investigate the effect of sediment anoxia on a typical pollution-tolerant submerged macrophyte species, Hydrilla verticillata, and acclimation mechanisms in the plant, a gradient of sediment anoxia was simulated with additions of sucrose to the sediment, which can stimulate increased concentrations of total nitrogen, NH4(+) and Fe in pore water. H. verticillata growth was significantly affected by highly anoxic conditions, as indicated by reduced total biomass in the 0.5 and 1% sucrose treatments. However, slight anoxia (0.1% sucrose addition) promoted growth, and the shoot biomass was 22.64% higher than in the control. In addition to morphologic alterations, H. verticillata showed physiological acclimations to anoxia, including increased anaerobic respiration and changes in carbon and nitrogen metabolism in roots. The soluble protein and soluble carbohydrate contents in roots of the 1% treatment were both significantly higher compared with those in the control. The increase in alcohol dehydrogenase activity and pyruvate content in the roots suggested that H. verticillata has a well-developed capacity for anaerobic fermentation. This study suggests that highly anoxic sediments inhibit the growth of H. verticillata and the species has a degree of tolerance to anoxic conditions. Further in situ investigations should be conducted on the interactions between sediment conditions and macrophytes to comprehensively evaluate the roles of sediment in the restoration of vegetation in eutrophic waters.

Anoxic deep-sea microbial dolomite as a paleoceanographic archive - new insights from old "bugs"

NASA Astrophysics Data System (ADS)

Miller, N. R.; Leybourne, M. I.

2010-12-01

Earth’s history of biogenic carbonate production is dominated by pre-skeletal (late Ediacaran) microbe-catalyzed carbonate, including low T/P microbial (aka organogenic) dolomite, but paleoceanographic contexts are unclear due to the lack of proxy control provided by skeletal analogs and/or diagenesis. Microbial communities affiliated with dolomite generation (chiefly sulfate reducers and methanogens) are now known to persist in a diversity of Recent anoxic environments, but only deep-sea settings are sufficiently insulated from eustatic-meteoric diagenesis to preserve long-term records of possible paleoceanographic significance. The Miocene Monterey Formation contains episodic-to-cyclic microbial dolomite intervals interstratified with microfossil calcite, and thereby offers an excellent test the paleoceoanographic archive potential of microbial dolomite. Accordingly, we established a detailed dolomite chemostratigraphic profile (δ18O, δ13C, TOC, trace elements/REEs) from a continuous, thermally immature, Monterey core (offshore Santa Barbara-Ventura Basin), preserving >100 distinct early diagenetic (pre significant compaction, pre-diatom dissolution, post-pyrite) microbial dolomite intervals. Despite dolomite horizons being physically separate from one stratum to the next, they exhibit regular core-wide variations in δ13C and δ18O. Dolomite within the main Monterey depositional interval has entirely negative δ13C values (-2 to -16‰) consistent with generation in the zone of microbial sulfate reduction, whereas positive δ13C values (+2 to +9‰) consistent with generation from methanogenic pore-waters occur in lithologic transitions with bounding formations. Dolomites within the main Monterey depositional interval mirror microfossil calcite δ18O variations, notably pronounced global mid-Miocene enrichment after ~14 Ma linked to cooling and significant expansion of Antarctic ice. Dolomite δ13C mirrors sediment accumulation rate, with lightest values associated with both slowest sedimentation rates and highest TOC contents. Interestingly, lightest δ13C dolomite intervals correspond in time to distinct δ13C enrichment (~16-13.5 Ma, CM6-CM3) observed globally in marine benthic foraminifera records, potentially directly linking organic matter burial to open ocean δ13C enrichment, prior to cooling and Antarctic ice expansion (Monterey Hypothesis). The persistent negative δ13C values of Monterey dolomites suggest formation within the zone of sulfate reduction, tied to slow sediment accumulation rates or increases in the flux of marine sulfate. Fe, Mn, Al, and Ba all follow δ13C variation, being less enriched where dolomites are more negative. Associated shale-normalized REE patterns also follow δ13C, being most like modern seawater (most negative Ce/Ce*, greatest HREE enrichment) where sediment accumulation rates were lowest. Monterey organogenic dolomites formed under steady state anoxic conditions thus appear to proxy several paleoceanographic processes.

Impact of Increased Thermokarst Activity on Polycyclic Aromatic Compound (PAC) Accumulation in Sediment of Lakes in the Hydrocarbon-Rich Uplands Adjacent to the Mackenzie Delta, NT, Canada

NASA Astrophysics Data System (ADS)

Eickmeyer, D.; Thienpont, J. R.; Blais, J. M.

2017-12-01

In ecologically sensitive, hydrocarbon-rich regions like the western Canadian Arctic, environmental monitoring of oil and gas development often focuses on both direct and unintentional consequences of increased exploration and extraction of hydrocarbon resources. However, proper assessments of impact from these activities could be confounded by natural petrogenic sources in permafrost-rich regions where increased thermokarst activity results in permafrost exposure and erosion of hydrocarbon-rich deposits. Using a paired-lake design in the tundra uplands adjacent to the Mackenzie Delta, NT, we examined 4 lakes with retrogressive thaw slump scars along their shores, and 4 nearby undisturbed reference lakes, focusing on polycyclic aromatic compound (PAC) deposition and composition in the sediment. Total organic carbon (TOC)-normalized concentrations for parent and alkylated PACs were higher in surface sediments of slump-affected lakes than the reference lakes. This followed the pattern previously observed for persistent organic pollutants in these lakes where presence of thaw slumps on the lake shore was associated with lower TOC content in the water column, resulting in a smaller pool of available organic carbon, leading to higher PAC concentrations. Diagnostic ratios of specific PACs also suggested the sediment of slump-affected lakes had greater influence from petroleum-based PAC sources than their reference counterparts. This interpretation was corroborated by a principle components analysis of the metal content in the sediment. Slump-affected lakes were enriched in metals related to shale-based, Quaternary deposits of the Mackenzie Basin (e.g. Ca, Sr, Mg) when compared to reference lakes where these surficial materials were not exposed by thermokarst activity. Higher PAC concentrations and composition indicative of petrogenic sources observed in sediment of slump-affected lakes were best explained as a combination of low TOC availability and increased inputs of previously bound hydrocarbons from the catchment due to permafrost erosion. These findings demonstrate that, to avoid misinterpreting the scale and nature of the impact of hydrocarbon development in northern landscapes, monitoring of sediment PACs must be assessed in the proper framework of these dynamic freshwater systems.

Sensitive trace enrichment of environmental andiandrogen vinclozolin from natural waters and sediment samples using hollow-fiber liquid-phase microextraction.

PubMed

Lambropoulou, Dimitra A; Albanis, Triantafyllos A

2004-12-17

The presence of vinclozolin in the environment as far as the endocrine disruption effects in biota are concerned has raised interest in the environmental fate of this compound. In this respect, the present study attempts to investigate the feasibility of applying a novel quantitative method, liquid-phase microextraction (LPME), so as to determine this environmental andiandrogen in environmental samples such as water and sediment samples. The technique involved the use of a small amount (3 microL) of organic solvent impregnated in a hollow fiber membrane, which was attached to the needle of a conventional GC syringe. The extracted samples were analyzed by gas chromatography coupled with electron-capture detection. Experimental LPME conditions such as extraction solvent, stirring rate, content of NaCl and pH were tested. Once LPME was optimized, the performance of the proposed technique was evaluated for the determination of vinclozolin in different types of natural water samples. The recovery of spiked water samples was from 80 to 99%. The procedure was adequate for quantification of vinclozolin in waters at levels of 0.010 to 50 microg/L (r> 0.994) with a detection limit of 0.001 microg/L (S/N= 3). Natural sediment samples from the Aliakmonas River area (Macedonia, Greece) spiked with the target andiandrogen compound were liquid-liquid extracted and analyzed by the methodology developed in this work. No significant interferences from the samples matrix were noticed, indicating that the reported methodology is an innovative tactic for sample preparation in sediment analysis, with a considerable improvement in the achieved detection limits. The results demonstrated that apart from analyte enrichment, the proposed LPME procedure also serves as clean-up method and could be successfully performed to determine trace amounts of vinclozolin in water and sediment samples.

Accumulation of as, pb, and cu associated with the recent sedimentary processes in the colorado delta, South of the United States-Mexico boundary.

PubMed

Daesslé, L W; Lugo-Ibarra, K C; Tobschall, H J; Melo, M; Gutiérrez-Galindo, E A; García-Hernández, J; Alvarez, L G

2009-05-01

Sediment cores from the Colorado River (CR) remnant delta were used to assess the changing sedimentation and pollutant deposition processes in response to extensive human manipulation of the river. The cores are formed of alternating layers of clays and silts, with isolated sandy horizons. The clayey units are interpreted as periods of flood flows into this low gradient and meandering estuary after dam construction in the United States. The geochemistry of these sediments is particular because of the association of MnO with CaO rather than with the Fe(2)O(3)-rich clays. Past pollution of the CR delta by As, and probably also Pb and Cu, is recorded in some cores. Enrichment factors (EFs) >1 for these elements and their statistical association suggest anthropogenic inputs. The most likely sources for these element enrichments (especially As) are the arsenate-based pesticides used intensively in the area during the first half of the 20th century. The transport of these elements from the nearby agricultural lands into the present river reaches appears to have been driven in part by flooding events of the CR. Flushing by river and tide flows appear to be responsible of a lower pollutant deposition in the CR compared to the adjacent Hardy River (HR). Arsenic in the buried clay units of the HR has concentrations above the probable toxic effect level (PEL) for dwelling organisms, with maximum concentrations of 30 microg g(-1). Excess (210)Pb activities ((210)Pb(xs)) indicate that fluxes of this unsupported atmospheric isotope were not constant in this estuarine environment. However, the presence of (210)Pb(xs) does indicate that these sediments accumulated during the last ~100 years. Aproximate sediment ages were estimated from the correlation of historic flooding events with the interpretation of the stratigraphic record. They are in fair agreement with the reported onset of DDT metabolites at the bottom of one core.

Carbon Transport, Transformation and Retention in Tropical Systems: The Lower Tana River Corridor as a Natural Laboratory

NASA Astrophysics Data System (ADS)

Govers, G.; Omengo, F.; Geeraert, N.; Bouillon, S.; Neyens, G.

2016-12-01

The lower Tana river in Kenya is an active river carrying high sediment and carbon loads, while lateral influxes from tributaries are very limited. We used this river as a natural laboratory to study the dynamics of carbon in the river-floodplain system. We measured carbon fluxes in the river as well as rates of carbon processing. Furthermore, we assessed carbon deposition in the floodplain and carbon mobilisation by river migration. We show that both within-river carbon dynamics as well as river-floodplain interaction can only be understood by accounting for autogenic river processes: the amounts of sediment (5-6 Mt yr-1) and particulate organic carbon (120-180 Mg yr-1) that are re-mobilised within the river reach (300 km) are similar to the amounts the reach receives from upstream. Carbon and sediment mobilisation are compensated for by deposition, both in the floodplain and within the river (point bars). This intensive exchange explains why the suspended sediment in the Tana river becomes finer (and more enriched in carbon) in the downstream direction, despite the deposition of fine, carbon-rich sediments in the floodplain. Contrary to what is found in temperate floodplains, overall carbon burial appears not to be very effective: most buried carbon is mineralised within decades after burial. However, burial efficiency is much higher for allochthonous organic carbon (deposited by the river) than for autochthonous organic carbon (sourced from local primary production). The Tana river does not only exchange carbon with its floodplain through deposition and remobilisation of POC. When floods occur, the floodplain acts as an important source of dissolved organic and inorganic carbon which is not only produced by organic carbon decomposition but also by weathering. Finally, there is significant CO2 outgassing from the Tana river, releasing 3-5 Mg C yr-1 to the atmosphere. Our study highlights the role of tropical river corridors as highly dynamic environments, which may be strongly affected by human management and/or climatic change. The planned construction of a major dam in the upper Tana is likely to steady the river's discharge and will limit lateral river migration and flooding, which may transform the lower Tana from a net sediment (and to a lesser extent, carbon) sink to a source.

Modern foraminiferal facies in a subtropical estuarine channel, Bertioga, São Paulo, Brazil

USGS Publications Warehouse

Eichler, P.P.B.; Eichler, B.B.; De Miranda, L. B.; Rodrigues, A.R.

2007-01-01

Numerical analyses of modern foraminiferal abundance and environmental data from the Bertioga Channel (Sa??o Paulo, Brazil) reveal multiple biofacies within an overall paralic setting. Despite its fisheries, mariculture and attraction to tourists, the environmental state of Bertioga Channel remains poorly studied. The present investigation is an attempt to partly fill this gap; the parameters examined include depth, salinity, temperature, organic carbon, sulfur content and bottom sediment type. Muddy sediments with high organic carbon content derived from land drainage are found in the inner parts of the channel, whereas sandy sediment dominates the areas adjacent to the Atlantic Ocean. In the eastern entrance to the channel, sandy sediment contain species of Rotaliida from Facies 1 (including Elphidium discoidale, Elphidium poeyanum, Hanzawaia boueana, Pararotalia cananeiaensis and Nonionella atlantica), reflecting normal marine salinity. Sediments with high percentages of silt and clay in polyhaline and eurybaline environments of the eastern part and Itapanhau?? River contain Facies 2, which includes Ammonia beccarii and Pararotalia cananeiaensis. In the western entrance and central, western and eastern parts, where salinities vary from 18 to 30 psu and the sediments contain both low and high organic carbon, the foraminifera from Facies 3 are dominated by Quinqueloculina milletti, Arenoparrella mexicana, Pararotalia cananeiaensis, Ammonia beccarii, Buliminella elegantissima, Elphidium sp., Elphidium excavatum, Elphidium gunteri and Elphidium poeyanum. In mesohaline and polyhaline waters of the central part, the organic-carbon-rich silt and clay contain Facies 4, which includes Ammonia beccarii, Pararotalia cananeiaensis, Elphidium excavatum and Elphidium sp. Most of organic-carbon-enriched, silty-clay substrates that are subject to the highest fresh-water discharge and high bottom temperatures support two different assemblages: one of mostly Rotaliina and the other mostly of Textulariida (Facies 5 and 6). Facies 5 includes Ammonia beecarii, Elphidium excavatum, Arenoparrella mexicana, Haplophragmoides wilberti, Siphotrochammina lobata, Trochammina inflata and Trochammina sp., all of which are typical of mesohaline sites (mainly Crumau?? and Trindade rivers), and Facies 6 includes Bolivina sp., Ammoastuta salsa, Arenoparrella mexicana, Haplophragmoides wilberti and Trochammina sp., all of which are typical of oligohaline and mesohaline mangrove fringes. The foraminiferal species from the present study are frequently found in paralic environments in Brazil, western Africa and other estuaries around the world.

Rare earth element compositions of core sediments from the shelf of the South Sea, Korea: Their controls and origins

NASA Astrophysics Data System (ADS)

Jung, Hoi-Soo; Lim, Dhongil; Choi, Jin-Yong; Yoo, Hae-Soo; Rho, Kyung-Chan; Lee, Hyun-Bok

2012-10-01

Rare earth elements (REEs) of bulk sediments and heavy mineral samples of core sediments from the South Sea shelf, Korea, were analyzed to determine the constraints on REE concentrations and distribution patterns as well as to investigate their potential applicability for discriminating sediment provenance. Bulk sediment REEs showed large variation in concentrations and distribution patterns primarily due to grain size and carbonate dilution effects, as well as due to an abundance of heavy minerals. In the fine sandy sediments (cores EZ02-15 and 19), in particular, heavy minerals (primarily monazite and titanite/sphene) largely influenced REE compositions. Upper continental crust-normalized REE patterns of these sand-dominated sediments are characterized by enriched light REEs (LREEs), because of inclusion of heavy minerals with very high concentrations in LREEs. Notably, such a strong LREE enrichment is also observed in Korean river sediments. So, a great care must be taken when using the REE concentrations and distribution patterns of sandy and coarse silty shelf sediments as a proxy for discriminating sediment provenance. In the fine-grained muddy sediments with low heavy mineral abundance, in contrast, REE fractionation ratios and their UCC-normalized patterns seem to be reliable proxies for assessing sediment provenance. The resultant sediment origin suggested a long lateral transportation of some fine-grained Chinese river sediments (probably the Changjiang River) to the South Sea of Korea across the shelf of the northern East China Sea.

Effects of Actinomycete Secondary Metabolites on Sediment Microbial Communities.

PubMed

Patin, Nastassia V; Schorn, Michelle; Aguinaldo, Kristen; Lincecum, Tommie; Moore, Bradley S; Jensen, Paul R

2017-02-15

Marine sediments harbor complex microbial communities that remain poorly studied relative to other biomes such as seawater. Moreover, bacteria in these communities produce antibiotics and other bioactive secondary metabolites, yet little is known about how these compounds affect microbial community structure. In this study, we used next-generation amplicon sequencing to assess native microbial community composition in shallow tropical marine sediments. The results revealed complex communities comprised of largely uncultured taxa, with considerable spatial heterogeneity and known antibiotic producers comprising only a small fraction of the total diversity. Organic extracts from cultured strains of the sediment-dwelling actinomycete genus Salinispora were then used in mesocosm studies to address how secondary metabolites shape sediment community composition. We identified predatory bacteria and other taxa that were consistently reduced in the extract-treated mesocosms, suggesting that they may be the targets of allelopathic interactions. We tested related taxa for extract sensitivity and found general agreement with the culture-independent results. Conversely, several taxa were enriched in the extract-treated mesocosms, suggesting that some bacteria benefited from the interactions. The results provide evidence that bacterial secondary metabolites can have complex and significant effects on sediment microbial communities. Ocean sediments represent one of Earth's largest and most poorly studied biomes. These habitats are characterized by complex microbial communities where competition for space and nutrients can be intense. This study addressed the hypothesis that secondary metabolites produced by the sediment-inhabiting actinomycete Salinispora arenicola affect community composition and thus mediate interactions among competing microbes. Next-generation amplicon sequencing of mesocosm experiments revealed complex communities that shifted following exposure to S. arenicola extracts. The results reveal that certain predatory bacteria were consistently less abundant following exposure to extracts, suggesting that microbial metabolites mediate competitive interactions. Other taxa increased in relative abundance, suggesting a benefit from the extracts themselves or the resulting changes in the community. This study takes a first step toward assessing the impacts of bacterial metabolites on sediment microbial communities. The results provide insight into how low-abundance organisms may help structure microbial communities in ocean sediments. Copyright © 2017 American Society for Microbiology.

Stable Carbon Isotope Fractionation during Bacterial Acetylene Fermentation: Potential for Life Detection in Hydrocarbon-Rich Volatiles of Icy Planet(oid)s

PubMed Central

Baesman, Shaun M.; Oremland, Ronald S.

2015-01-01

Abstract We report the first study of stable carbon isotope fractionation during microbial fermentation of acetylene (C2H2) in sediments, sediment enrichments, and bacterial cultures. Kinetic isotope effects (KIEs) averaged 3.7 ± 0.5‰ for slurries prepared with sediment collected at an intertidal mudflat in San Francisco Bay and 2.7 ± 0.2‰ for a pure culture of Pelobacter sp. isolated from these sediments. A similar KIE of 1.8 ± 0.7‰ was obtained for methanogenic enrichments derived from sediment collected at freshwater Searsville Lake, California. However, C2H2 uptake by a highly enriched mixed culture (strain SV7) obtained from Searsville Lake sediments resulted in a larger KIE of 9.0 ± 0.7‰. These are modest KIEs when compared with fractionation observed during oxidation of C1 compounds such as methane and methyl halides but are comparable to results obtained with other C2 compounds. These observations may be useful in distinguishing biologically active processes operating at distant locales in the Solar System where C2H2 is present. These locales include the surface of Saturn's largest moon Titan and the vaporous water- and hydrocarbon-rich jets emanating from Enceladus. Key Words: Acetylene—Fermentation—Isotope fractionation—Enceladus—Life detection. Astrobiology 15, 977–986. PMID:26539733

Anaerobic biodegradation of PAHs in mangrove sediment with amendment of NaHCO3.

PubMed

Li, Chun-Hua; Wong, Yuk-Shan; Wang, Hong-Yuan; Tam, Nora Fung-Yee

2015-04-01

Mangrove sediment is unique in chemical and biological properties. Many of them suffer polycyclic aromatic hydrocarbon (PAH) contamination. However, the study on PAH biological remediation for mangrove sediment is deficient. Enriched PAH-degrading microbial consortium and electron acceptor amendment are considered as two effective measures. Compared to other electron acceptors, the study on CO2, which is used by methanogens, is still seldom. This study investigated the effect of NaHCO3 amendment on the anaerobic biodegradation of four mixed PAHs, namely fluorene (Fl), phenanthrene (Phe), fluoranthene (Flua) and pyrene (Pyr), with or without enriched PAH-degrading microbial consortium in mangrove sediment slurry. The trends of various parameters, including PAH concentrations, microbial population size, electron-transport system activities, electron acceptor and anaerobic gas production were monitored. The results revealed that the inoculation of enriched PAH-degrading consortium had a significant effect with half lives shortened by 7-13 days for 3-ring PAHs and 11-24 days for 4-ring PAHs. While NaHCO3 amendment did not have a significant effect on the biodegradation of PAHs and other parameters, except that CO2 gas in the headspace of experimental flasks was increased. One of the possible reasons is that mangrove sediment contains high concentrations of other electron acceptors which are easier to be utilized by anaerobic bacteria, the other one is that the anaerobes in mangrove sediment can produce enough CO2 gas even without adding NaHCO3. Copyright © 2015. Published by Elsevier B.V.

Microbial and biogeochernical processes Soda Lake, Nevada

USGS Publications Warehouse

Oremland, R.S.; Cloern, J.E.; Sofer, Z.; Smith, R.L.; Culbertson, C.W.; Zehr, J.; Miller, L.; Cole, B.; Harvey, R.; Iversen, N.; Klug, M.; Des Marais, D J; Rau, G.

1988-01-01

Meromictic, alkaline lakes represent modern-day analogues of lacustrine source rock depositional environments. In order to further our understanding of how these lakes function in terms of limnological and biogeochemical processes, we have conducted an interdisciplinary study of Big Soda Lake. Annual mixolimnion productivity (ca. 500 g m-2) is dominated by a winter diatom bloom (60% of annual) caused by upward transport of ammonia to the epilimnion. The remainder of productivity is attributable to chemoautotrophs (30%) and photosynthetic bacteria (10%) present at the oxic -anoxic interface from May to November. Studies of bacterial heterotrophy and particulate fluxes in the water column indicate that about 90% of annual productivity is remineralized in the mixolimnion, primarily by fermentative bacteria. However, high rates of sulphate reduction (9-29 mmol m-2 yr-1) occur in the monimolimnion waters, which could remineralize most (if not all) of the primary productivity. This discrepancy has not as yet been fully explained. Low rates of methanogenesis also occur in the monimolimnion waters and sediments. Most of the methane is consumed by anaerobic methane oxidation occurring in the monimolimnion water column. Other bacterial processes occurring in the lake are also discussed. Preliminary studies have been made on the organic geochemistry of the monimolimnion sediments. Carbon-14-dating indicates a lower depositional rate prior to meromixis and a downcore enrichment in 13C of organic carbon and chlorophyll derivatives. Hydrous pyrolysis experiments indicate that the sediment organic matter is almost entirely derived from the water column with little or no contribution from terrestrial sources. The significance of the organics released by hydrous pyrolysis is discussed.

Environmental monitoring and assessment of heavy metals in surface sediments at Coleroon River Estuary in Tamil Nadu, India.

PubMed

Venkatramanan, S; Chung, S Y; Ramkumar, T; Selvam, S

2015-08-01

The combined studies on grain size distribution, organic matter contents of sediments, sequential extraction and bulk concentration of heavy metals, statistical analysis, and ecological risk assessments were carried out to investigate the contamination sources and ecological risks of surface sediments at Coleroon River Estuary in Tamil Nadu, India. The sequential extraction of metals showed that a larger portion of the metals was associated with the residual phase and also in other fractions. The low concentrations of heavy metals were found in exchangeable and carbonate bounds (bioavailable phases). It revealed that sediments of Coleroon River Estuary were relatively unpolluted and were influenced mainly by natural sources. The observed order of bulk concentrations of heavy metals in the sediments was as follows: Fe > Mn > Zn > Cu > Pb > Cr > Ni > Co. Factor analyses represented that the enrichment of heavy metals was mostly resulted from lithogenic origins associated with anthropogenic sources. These sources were reconfirmed by cluster analysis. Risk assessment code (RAC) suggested that all metals were not harmful in monsoon season. However, Fe was in medium risk, and Mn and Cu were in low risk in summer. According to pollution load index (PLI) of sediments, all heavy metals were toxic. Cu might be related with adverse biological effects on the basis of sediment quality guidelines (SQG) in both seasons. These integrated approaches were very useful to identify the contamination sources and ecological risks of sediments in estuarine environment. It is expected that this research can give a useful information for the remediation of heavy metals in sediments.

Uranium enrichment in lacustrine oil source rocks of the Chang 7 member of the Yanchang Formation, Erdos Basin, China

NASA Astrophysics Data System (ADS)

Yang, Hua; Zhang, Wenzheng; Wu, Kai; Li, Shanpeng; Peng, Ping'an; Qin, Yan

2010-09-01

The oil source rocks of the Chang 7 member of the Yanchang Formation in the Erdos Basin were deposited during maximum lake extension during the Late Triassic and show a remarkable positive uranium anomaly, with an average uranium content as high as 51.1 μg/g. Uranium is enriched together with organic matter and elements such as Fe, S, Cu, V and Mo in the rocks. The detailed biological markers determined in the Chang 7 member indicate that the lake water column was oxidizing during deposition of the Chang 7 member. However, redox indicators for sediments such as S 2- content, V/Sc and V/(V + Ni) ratios demonstrate that it was a typical anoxic diagenetic setting. The contrasted redox conditions between the water column and the sediment with a very high content of organic matter provided favorable physical and chemical conditions for syngenetic uranium enrichment in the oil source rocks of the Chang 7 member. Possible uranium sources may be the extensive U-rich volcanic ash that resulted from contemporaneous volcanic eruption and uranium material transported by hydrothermal conduits into the basin. The uranium from terrestrial clastics was unlike because uranium concentration was not higher in the margin area of basin where the terrestrial material input was high. As indicated by correlative analysis, the oil source rocks of the Chang 7 member show high gamma-ray values for radioactive well log data that reflect a positive uranium anomaly and are characterized by high resistance, low electric potential and low density. As a result, well log data can be used to identify positive uranium anomalies and spatial distribution of the oil source rocks in the Erdos Basin. The estimation of the total uranium reserves in the Chang 7 member attain 0.8 × 10 8 t.

Does Trophic Status Enhance or Reduce the Thermal Tolerance of Scleractinian Corals? A Review, Experiment and Conceptual Framework

PubMed Central

Fabricius, Katharina E.; Cséke, Szilvia; Humphrey, Craig; De’ath, Glenn

2013-01-01

Global warming, and nutrient and sediment runoff from coastal development, both exert increasing pressures on coastal coral reefs. The objective of this study was to resolve the question of whether coastal eutrophication may protect corals from thermal stress by improving their nutritional status, or rather diminish their thermal tolerance through the synergy of dual stressors. A review of previous studies on the topic of combined trophic status and heat exposure on the thermal tolerance of corals reveals a broad range of outcomes, including synergistic, additive and antagonistic effects. We conducted a 90-day long experiment exposing corals to realistic levels of elevated nutrients and sediments, and heat stress. Colonies of two common scleractinian corals (Acropora millepora and Montipora tuberculosa) were kept in coastal seawater, or coastal seawater that was further organically and nutrient enriched (OE), and/or enriched with nitrate. Batches of OE were created daily, facilitating nutrient uptake, plankton succession and organic enrichment as observed in coastal waters. After 10 days of acclimation, 67% of the colonies had their temperature gradually increased from 27° to 31.2°C. After 3–7 weeks of heat stress, colonies of both species had significantly greater reductions in fluorescence yields and lower survival in OE than without addition of OE. Furthermore, photophysiological recovery was incomplete 31–38 days after ending the heat stress only in the OE treatments. Nitrate alone had no measurable effect on survival, bleaching and recovery in either species. Skeletal growth rates were reduced by 45% in heat-stressed A. millepora and by 24% in OE-exposed M. tuberculosa. We propose a conceptual trophic framework that resolves some of the apparently contradictory outcomes revealed by the review. Our study shows that management actions to reduce coastal eutrophication can improve the resistance and resilience of vulnerable coastal coral reefs to warming temperatures. PMID:23349876

Arsenic in groundwater of the Paraiba do Sul delta, Brazil: An atmospheric source?

PubMed

Mirlean, N; Baisch, P; Diniz, D

2014-06-01

High concentrations of arsenic (>50μg L(-1)) have been detected for the first time in groundwater of the wave-dominated Paraiba do Sul delta, Brazil. The deltaic shallow groundwater aquifer is enriched in arsenic fixed by authigenic sulfides. A study of palynomorphs confirmed that aquifer sediments were formed in inter-dune lakes/swamps lately covered by eolian sands. The organic sediments of contemporaneous inter-dune lake/swamp contain very high concentration of As: up to 180mg kg(-1) and 163μg L(-1) in dry gyttja material and interstitial water, respectively. The As in recent lake/swamp sediments is retained by iron hydroxides in upper and probably by sulfides in lower layers. In the absence of connection of inter-dune lakes/swamps with fluvial currents, the atmospheric input of As could be considered as the principal source in sediments. The calculation demonstrates the possibility of high concentrations of As accumulation in sediments of inter-dune lakes/swamps from atmospheric precipitations within several centuries before they will be covered by eolian sands and turned into shallow aquifer. Considering the commonalities of wave-dominated delta formations, we can predict more prevalent As accumulation in delta plain groundwater. Copyright © 2014 Elsevier B.V. All rights reserved.

Effect of dissolved organic matter (DOM) of contrasting origins on Cu and Pb speciation and toxicity to Paracentrotus lividus larvae.

PubMed

Sánchez-Marín, Paula; Santos-Echeandía, Juan; Nieto-Cid, Mar; Alvarez-Salgado, Xosé Antón; Beiras, Ricardo

2010-01-31

Water samples of contrasting origin, including natural seawater, two sediment elutriates and sewage-influenced seawater, were collected and obtained to examine the effect of the dissolved organic matter (DOM) present on metal bioavailability. The carbon content (DOC) and the optical properties (absorbance and fluorescence) of the coloured DOM fraction (CDOM) of these materials were determined. Cu and Pb complexation properties were measured by anodic stripping voltammetry (ASV) and the effect of DOM on Cu and Pb bioavailability was studied by means of the Paracentrotus lividus embryo-larval bioassay. Sediment elutriates and sewage-influenced water (1) were enriched 1.4-1.7 times in DOC; (2) absorbed and reemitted more light; and (3) presented higher Cu complexation capacities (L(Cu)) than the natural seawater used for their preparation. L(Cu) varied from 0.08 microM in natural seawater to 0.3 and 0.5 microM in sediment elutriates and sewage-influenced water, respectively. Differences in DOC, CDOM and Cu complexation capacities were reflected in Cu toxicity. DOM enriched samples presented a Cu EC(50) of 0.64 microM, significantly higher than the Cu EC(50) of natural and artificial seawater, which was 0.38 microM. The protecting effect of DOM on Cu toxicity greatly disappeared when the samples were irradiated with high intensity UV-light. Cu toxicity could be successfully predicted considering ASV-labile Cu concentrations in the samples. Pb complexation by DOM was only detected in the DOM-enriched samples and caused little effect on Pb EC(50). This effect was contrary for both elutriates: one elutriate reduced Pb toxicity in comparison with the control artificial seawater, while the other increased it. UV irradiation of the samples caused a marked increase in Pb toxicity, which correlated with the remaining DOC concentration. DOM parameters were related to Cu speciation and toxicity: good correlations were found between DOC and Cu EC(50), while L(Cu) correlated better with the fluorescence of marine humic substances. The present results stress the importance of characterizing not only the amount but also the quality of seawater DOM to better predict ecological effects from total metal concentration data. Copyright (c) 2009 Elsevier B.V. All rights reserved.

Diagnosis of potential stressors adversely affecting benthic invertebrate communities in Greenwich Bay, Rhode Island, USA.

PubMed

Pelletier, Marguerite; Ho, Kay; Cantwell, Mark; Perron, Monique; Rocha, Kenneth; Burgess, Robert M; Johnson, Roxanne; Perez, Kenneth; Cardin, John; Charpentier, Michael A

2017-02-01

Greenwich Bay is an urbanized embayment of Narragansett Bay potentially impacted by multiple stressors. The present study identified the important stressors affecting Greenwich Bay benthic fauna. First, existing data and information were used to confirm that the waterbody was impaired. Second, the presence of source, stressor, and effect were established. Then linkages between source, stressor, and effect were developed. This allows identification of probable stressors adversely affecting the waterbody. Three pollutant categories were assessed: chemicals, nutrients, and suspended sediments. This weight of evidence approach indicated that Greenwich Bay was primarily impacted by eutrophication-related stressors. The sediments of Greenwich Bay were carbon enriched and low dissolved oxygen concentrations were commonly seen, especially in the western portions of Greenwich Bay. The benthic community was depauperate, as would be expected under oxygen stress. Although our analysis indicated that contaminant loads in Greenwich Bay were at concentrations where adverse effects might be expected, no toxicity was observed, as a result of high levels of organic carbon in these sediments reducing contaminant bioavailability. Our analysis also indicated that suspended sediment impacts were likely nonexistent for much of the Bay. This analysis demonstrates that the diagnostic procedure was useful to organize and assess the potential stressors impacting the ecological well-being of Greenwich Bay. This diagnostic procedure is useful for management of waterbodies impacted by multiple stressors. Environ Toxicol Chem 2017;36:449-462. © 2016 SETAC. © 2016 SETAC.

Strain-resolved Metatranscriptomic Analysis Reveals Unexpectedly Diverse Heterotrophic and Lithoautotrophic Microbial Metabolism in Naturally Reduced Aquifer Sediments

NASA Astrophysics Data System (ADS)

Beller, H. R.; Jewell, T. N. M.; Karaoz, U.; Bill, M.; Chakraborty, R.; Brodie, E.; Williams, K. H.

2016-12-01

In this study, we sought to better understand how natural organic matter fuels microbial communities in the anoxic subsurface at the Rifle (CO) site. We conducted a 20-day microcosm experiment with naturally reduced zone (NRZ) sediments and collected samples every 5 days for omics (metagenome and metatranscriptome) and geochemical measurements. No electron donors were added other than the NRZ sediment, which is enriched in buried woody plant material. The microcosms were constructed and incubated under anaerobic conditions in serum bottles with a N2 headspace. Biogeochemical measurements indicated that the decomposition of native organic matter occurred in different phases, including mineralization of dissolved organic carbon (DOC) to CO2 during the first week of incubation, followed by a pulse of acetogenesis that dominated carbon flux after 2 weeks. The depletion of DOC over time was strongly correlated with increases in expression of many genes associated with heterotrophy (e.g., amino acid, fatty acid, and carbohydrate metabolism) belonging to a Hydrogenophaga strain that accounted for a relatively large percentage ( 8%) of the metatranscriptome. This Hydrogenophaga strain also expressed genes indicative of chemolithoautotrophy, including CO2 fixation (RubisCO), H2 oxidation, S-compound oxidation, and denitrification. The pulse of acetogenesis appears to have been collectively catalyzed by a number of different organisms and metabolisms, most prominently pyruvate:ferredoxin oxidoreductase. Unexpected genes were identified among the most highly expressed (>98th percentile) transcripts, including acetone carboxylase and cell wall-associated hydrolases, some of which are known to act on peptidoglycan. Many of the most highly expressed hydrolases belonged to a Ca. Bathyarchaeota strain and may have been associated with scavenging of bacterial biomass. Overall, observed metabolism ranged far beyond the expected fermentation of plant-derived organic matter.

Dissolved organic matter (DOM) in pore water of Arctic Ocean sediments: linking DOM molecular composition with microbial community structure

NASA Astrophysics Data System (ADS)

Rossel, P. E.; Bienhold, C.; Boetius, A.; Dittmar, T.

2016-02-01

Marine organic matter (OM) that sinks from surface waters to the seafloor is the energy and carbon source for benthic communities. These communities produce dissolved organic matter (DOM) in the process of remineralization, enriching the sediment porewater with fresh DOM compounds. In the Arctic Ocean, primary production is limited by nutrients and light and is thus strongly influenced by sea ice cover. Ice cover is expected to further decrease due to global warming, which may have important consequences for primary production and the quantity and quality of OM exported to the seafloor. This study focused on: 1) the molecular composition of the DOM in sediment pore waters of the deep Eurasian Arctic basins, 2) whether there is any relation between Arctic Ocean ice cover and DOM composition and 3) whether the DOM composition correlates with microbial community structure. Molecular data, obtained via 15 Tesla Fourier transform ion cyclotron resonance mass spectrometry, were statistically correlated with environmental parameters. The productive ice margin stations showed higher abundances of molecular formulae of peptides, unsaturated aliphatics and saturated fatty acids. This molecular trend is indicative of fresh OM and phytodetritus deposition, compared to the northernmost, ice-covered stations which had stronger aromatic signals. Benthic bacterial community structure, as assessed with the fingerprinting method ARISA, was significantly correlated with DOM molecular composition. Further analyses using Illumina next-generation sequencing will enable the taxonomic identification of specific bacterial groups and their interdependence with DOM compounds. This study contributes to the understanding of the coupling between Arctic Ocean productivity and its depositional regime, and provides first insights into potential links between microbial community structure and DOM molecular composition in Arctic sediments

The sedimentary organic matter from a Lake Ichkeul core (far northern Tunisia): Rock-Eval and biomarker approach

NASA Astrophysics Data System (ADS)

Affouri, Hassène; Sahraoui, Olfa

2017-05-01

The vertical distributions of bulk and molecular biomarker composition in samples from a ca. 156 cm sediment core from Lake Ichkeul were determined. Bulk analysis (Rock-Eval pyrolysis, carbonate, lipid extraction) and molecular analysis of saturated fractions were used to characterize the nature, preservation conditions and input of sedimentary organic matter (OM) to this sub-wet lake environment. The sediments are represented mainly by gray-black silty-clay facies where the carbonate (CaCO3) content varies in a range of 10-30% dry sediment. Rock-Eval pyrolysis revealed a homogeneous total organic carbon (TOC) content of ca. 1% sediment, but with down core fluctuation, indicating different anoxic conditions at different depths and material source variation. The values show three periods of relative enrichment, exceeding ca. 1%, at 146-134 cm, 82 cm and 14-0 cm depth. The low Hydrogen Index (HI) values [<119 mg hydrocarbon (HC)/g TOC)] were characteristic of continental Type III OM. The Tmax values in the range 415-420 °C were characteristic of immature OM at an early diagenetic stage. The distributions of n-alkanes (C17 to C34), isoprenoid (iso) alkanes (pristane and phytane), terpanes and steranes showed that the OM is a mixture of marine algal and bacterial source and emergent and floating higher plant origin. In addition, the distributions, as well as several biomarker ratios (n-alkanes, iso-alkanes/n-alkanes), showed that the OM is a mixture of immature and mature. Significant downcore fluctuation was observed in the molecular composition. This indicates intense microbial activity below ca. 50 cm core depth under an anoxic and brackish environment.

Environmental Implications of Ediacaran C-isotopic Shifts

NASA Astrophysics Data System (ADS)

Kelly, A. E.; Rothman, D. H.; Love, G. D.; Grosjean, E.; Fike, D. A.; Zumberge, J. E.; Summons, R. E.

2008-12-01

Compound-specific carbon isotope analyses of biomarkers show a widespread reversal in isotopic patterns in the Ediacaran. We analyzed oils and/or rocks from Eastern Siberia, Oman and Australia and confirmed that, in sediments and oils older than ~550 Ma, n-alkanes are enriched in 13C relative to the acyclic isoprenoids pristane and phytane. In younger sediments, the n-alkanes are depleted compared to these isoprenoids with the possible exception of those deposited during Phanerozoic oceanic anoxic events.1 Pristane and phytane are considered to be derived from photosynthetic primary inputs and, based on established biosynthetic relationships of organisms that dominate the modern ocean, should be 13C- enriched relative to n-alkanes from the same source. Therefore, the presence of n-alkanes with anomalously enriched isotopic compositions before 550 Ma may signify a high relative abundance of bacterial heterotrophs that extensively recycled organic matter (Corg) in the water column.2 The switch from anomalous isotopic ordering to isoprenoid: n-alkyl biosynthetic relationships characteristic of the Phanerozoic is observed to take place in the Ediacaran. In Oman, this coincides with the termination of the Shuram Excursion when marine carbonates show very negative δ13C values with no corresponding shift in the isotopic composition of co-occurring Corg.3 This has been attributed to the oxidation of a large pool of Corg in the deep ocean3 with a corresponding fundamental change in C-cycle dynamics.4 Several hypotheses, many ultimately linked to release of molecular oxygen via enhanced Corg burial, have been proposed to explain these phenomena. They include the evolution of: bilaterian animals with guts that rapidly export organic matter to the ocean floor as fecal pellets, reducing the amount of heterotrophy in the water column,2 biomineralization, providing ballast for organic export,4 and algae with decay-resistant biopolymers.4 Alternatively, tectonism and the rifting of Rodinia may have indirectly increased the burial flux of Corg. Additionally, the success of sponges and other filter-feeding Ediacaran fauna at the time may have been an important factor. References 1. e.g. Grice et al., 2005. Science 307, 706-709. 2. Logan et al., 1995. Nature 376, 53-56. 3. Fike et al., 2006. Nature 444, 744-747. 4. Rothman et al., 2003. PNAS 100, 8124-8129.

Successive transitory distribution of Thaumarchaeota and partitioned distribution of Bathyarchaeota from the Pearl River estuary to the northern South China Sea.

PubMed

Zhou, Zhichao; Zhang, Guo-Xia; Xu, Yan-Bin; Gu, Ji-Dong

2018-06-26

Thaumarchaeota and Bathyarchaeota (formerly named Miscellaneous Crenarchaeotal Group, MCG) are globally occurring archaea playing potential roles in nitrogen and carbon cycling, especially in marine benthic biogeochemical cycle. Information on their distributional and compositional patterns could provide critical clues to further delineate their physiological and biochemical characteristics. Profiles of thaumarchaeotal and the total archaeal community in the northern South China Sea surface sediments revealed a successively transitional pattern of Thaumarchaeota composition using MiSeq sequencing. Shallow-sea sediment enriched phylotypes decreased gradually along the slope from estuarine and coastal marine region to the deep-sea, while deep-sea sediment enriched phylotypes showed a trend of increasing. Proportion of Thaumarchaeota within the total archaea increased with seawater depth. Phylotypes enriched in shallow- and deep-sea sediments were affiliated to OTUs originated from similar niches, suggesting that physiological adaption not geographical distance shaped the distribution of Thaumarchaeota lineages. Quantitative PCR also depicted a successive decrease of thaumarchaeotal 16S rRNA gene abundance from the highest at shallow-sea sites E708S and E709S (2.57 × 10 6 and 2.73 × 10 6  gene copies/g of dry sediment) to the lowest at deep-sea sites E525S and E407S (1.97 × 10 6 and 2.14 × 10 6  gene copies/g of dry sediment). Both of the abundance fractions of Bathyarchaeota subgroups (including subgroups 1, 6, 8, 10, 13, 15, 17, and ungrouped Bathyarchaeota) and the total Bathyarchaeota in the total archaea showed a negative distribution to seawater depth. Partitioned distribution of Bathyarchaeota fraction in the total archaea is documented for the first time in this study, and the shallow- and deep-sea Bathyarchaeota could account for 17.8 and 0.8%, respectively, on average. Subgroups 6 and 8, enriched subgroups in shallow-sea sediments, largely explained this partitioned distribution pattern according to seawater depth. Their prevalence in shallow-sea and suboxic estuarine sediments rather than deep-sea sediments hints that their metabolic properties of carbon metabolism are adapted to carbon substrates in these environments.

Differential arsenic binding in the sediments of two sites in Chile's lower Loa River basin.

PubMed

Bugueño, Manuel P; Acevedo, Sara E; Bonilla, Carlos A; Pizarro, Gonzalo E; Pasten, Pablo A

2014-01-01

Fluvial sediments from two lower Loa River basin sites in northern Chile were compared in order to probe the effects of vegetation and organic matter (OM) on As accumulation in fluvial environments. The two sites were the Sloman dam, which lacks macrophytes and has a low OM content (2.4%) in sediments, and the Quillagua Oasis, which is 23 km downstream from the Sloman site and has a higher OM (6.2%) in sediments and abundant aquatic plant life. The Quillagua site had preferential As enrichment with a co-occurrence pattern that differed from that of the Sloman site, which had a lower As concentration (1528 vs. 262 mg/kg d.w., respectively). At the Quillagua site, As concentration was strongly correlated with Mn and OM (r = 0.91 and 0.85, respectively); while at the Sloman site, As concentration in sediments was significantly correlated with Ca and Sr (r = 0.63 and 0.54, respectively). Sequential extraction analyses showed that the Sloman site had higher percentage of easily exchangeable As within the surface sediment (12%, 45 mg/kg d.w.) compared with the Quillagua site (3%, 40 mg/kg d.w.). These contrasting results suggest that both vegetation and OM control the immobilization and accumulation of As in the arid Loa River basin. © 2013 Elsevier B.V. All rights reserved.

High pH microbial ecosystems in a newly discovered, ephemeral, serpentinizing fluid seep at Yanartaş (Chimera), Turkey

PubMed Central

Meyer-Dombard, D'Arcy R.; Woycheese, Kristin M.; Yargıçoğlu, Erin N.; Cardace, Dawn; Shock, Everett L.; Güleçal-Pektas, Yasemin; Temel, Mustafa

2015-01-01

Gas seeps emanating from Yanartaş (Chimera), Turkey, have been documented for thousands of years. Active serpentinization produces hydrogen and a range of carbon gases that may provide fuel for life. Here we report a newly discovered, ephemeral fluid seep emanating from a small gas vent at Yanartaş. Fluids and biofilms were sampled at the source and points downstream. We describe site conditions, and provide microbiological data in the form of enrichment cultures, Scanning electron microscopy (SEM), carbon and nitrogen isotopic composition of solids, and PCR screens of nitrogen cycle genes. Source fluids are pH 11.95, with a Ca:Mg of ~200, and sediments under the ignited gas seep measure 60°C. Collectively, these data suggest the fluid is the product of active serpentinization at depth. Source sediments are primarily calcite and alteration products (chlorite and montmorillonite). Downstream, biofilms are mixed with montmorillonite. SEM shows biofilms distributed homogeneously with carbonates. Organic carbon accounts for 60% of the total carbon at the source, decreasing downstream to <15% as inorganic carbon precipitates. δ13C ratios of the organic carbon fraction of solids are depleted (−25 to −28‰) relative to the carbonates (−11 to −20‰). We conclude that heterotrophic processes are dominant throughout the surface ecosystem, and carbon fixation may be key down channel. δ15N ratios ~3‰, and absence of nifH in extracted DNA suggest that nitrogen fixation is not occurring in sediments. However, the presence of narG and nirS at most locations and in enrichments indicates genomic potential for nitrate and nitrite reduction. This small seep with shallow run-off is likely ephemeral, but abundant preserved microterracettes in the outflow and the surrounding area suggest it has been present for some time. This site and others like it present an opportunity for investigations of preserved deep biosphere signatures, and subsurface-surface interactions. PMID:25646094

High pH microbial ecosystems in a newly discovered, ephemeral, serpentinizing fluid seep at Yanartaş (Chimera), Turkey.

PubMed

Meyer-Dombard, D'Arcy R; Woycheese, Kristin M; Yargıçoğlu, Erin N; Cardace, Dawn; Shock, Everett L; Güleçal-Pektas, Yasemin; Temel, Mustafa

2014-01-01

Gas seeps emanating from Yanartaş (Chimera), Turkey, have been documented for thousands of years. Active serpentinization produces hydrogen and a range of carbon gases that may provide fuel for life. Here we report a newly discovered, ephemeral fluid seep emanating from a small gas vent at Yanartaş. Fluids and biofilms were sampled at the source and points downstream. We describe site conditions, and provide microbiological data in the form of enrichment cultures, Scanning electron microscopy (SEM), carbon and nitrogen isotopic composition of solids, and PCR screens of nitrogen cycle genes. Source fluids are pH 11.95, with a Ca:Mg of ~200, and sediments under the ignited gas seep measure 60°C. Collectively, these data suggest the fluid is the product of active serpentinization at depth. Source sediments are primarily calcite and alteration products (chlorite and montmorillonite). Downstream, biofilms are mixed with montmorillonite. SEM shows biofilms distributed homogeneously with carbonates. Organic carbon accounts for 60% of the total carbon at the source, decreasing downstream to <15% as inorganic carbon precipitates. δ(13)C ratios of the organic carbon fraction of solids are depleted (-25 to -28‰) relative to the carbonates (-11 to -20‰). We conclude that heterotrophic processes are dominant throughout the surface ecosystem, and carbon fixation may be key down channel. δ(15)N ratios ~3‰, and absence of nifH in extracted DNA suggest that nitrogen fixation is not occurring in sediments. However, the presence of narG and nirS at most locations and in enrichments indicates genomic potential for nitrate and nitrite reduction. This small seep with shallow run-off is likely ephemeral, but abundant preserved microterracettes in the outflow and the surrounding area suggest it has been present for some time. This site and others like it present an opportunity for investigations of preserved deep biosphere signatures, and subsurface-surface interactions.

Nutrient and trace-element enrichment of Coeur d'Alene Lake, Idaho

USGS Publications Warehouse

Woods, P.F.; Beckwith, M.A.

1996-01-01

The limnological characteristics and geochemistry of lakebed sediments in Coeur d'Alene Lake, a 129-square-kilometer, natural lake in northern Idaho, were assessed during 1991-92 because of the possible interaction of nutrient enrichment with the highly enriched trace-element concentrations stored in the lakebed. The lake was classified as oligotrophic during 1991-92 on the basis of annual geometric mean concentrations, in micrograms per liter, of total phosphorus (4.1), total nitrogen (247), and chlorophyll-a (0.54). Despite its oligotrophy, the lake developed a substantial hypolimnetic dissolved-oxygen deficit in both years during the later stage of thermal stratification. The lake's current trophic state of oligotrophic differs from the mesotrophic ranking it received in 1975 during the National Eutrophication Survey. The shift in trophic state was consistent with nutrient-load reductions that have occurred within the lake's 9,690-square-kilometer drainage basin since the early 1970's. Approximately 85 percent of the lakebed's surface area was highly enriched in antimony, arsenic, cadmium, lead, mercury, silver, and zinc. Mean total concentrations, in milligrams per kilogram, for cadmium, lead, and zinc in the enriched lakebed sediments were, respectively, 62, 1,900, and 3,600. In contrast, the concentrations of cadmium, lead, and zinc in unenriched lakebed sediments in the lake's southern end were, respec- tively, 2.8, 24, and 110 milligrams per kilogram. The vast majority of the trace elements in the surficial and subsurface sediments were associated with ferric oxides, not sulfides as previously postulated. Under reducing conditions, such as within as anoxic hypolimnon, the ferric oxide- associated trace elements would be readily soluble and available for release into the overlying water column. (USGS)

Marine sediments microbes capable of electrode oxidation as a surrogate for lithotrophic insoluble substrate metabolism

PubMed Central

Rowe, Annette R.; Chellamuthu, Prithiviraj; Lam, Bonita; Okamoto, Akihiro; Nealson, Kenneth H.

2015-01-01

Little is known about the importance and/or mechanisms of biological mineral oxidation in sediments, partially due to the difficulties associated with culturing mineral-oxidizing microbes. We demonstrate that electrochemical enrichment is a feasible approach for isolation of microbes capable of gaining electrons from insoluble minerals. To this end we constructed sediment microcosms and incubated electrodes at various controlled redox potentials. Negative current production was observed in incubations and increased as redox potential decreased (tested −50 to −400 mV vs. Ag/AgCl). Electrode-associated biomass responded to the addition of nitrate and ferric iron as terminal electron acceptors in secondary sediment-free enrichments. Elemental sulfur, elemental iron and amorphous iron sulfide enrichments derived from electrode biomass demonstrated products indicative of sulfur or iron oxidation. The microbes isolated from these enrichments belong to the genera Halomonas, Idiomarina, Marinobacter, and Pseudomonas of the Gammaproteobacteria, and Thalassospira and Thioclava from the Alphaproteobacteria. Chronoamperometry data demonstrates sustained electrode oxidation from these isolates in the absence of alternate electron sources. Cyclic voltammetry demonstrated the variability in dominant electron transfer modes or interactions with electrodes (i.e., biofilm, planktonic or mediator facilitated) and the wide range of midpoint potentials observed for each microbe (from 8 to −295 mV vs. Ag/AgCl). The diversity of extracellular electron transfer mechanisms observed in one sediment and one redox condition, illustrates the potential importance and abundance of these interactions. This approach has promise for increasing our understanding the extent and diversity of microbe mineral interactions, as well as increasing the repository of microbes available for electrochemical applications. PMID:25642220

Bacteria beneath the West Antarctic ice sheet.

PubMed

Lanoil, Brian; Skidmore, Mark; Priscu, John C; Han, Sukkyun; Foo, Wilson; Vogel, Stefan W; Tulaczyk, Slawek; Engelhardt, Hermann

2009-03-01

Subglacial environments, particularly those that lie beneath polar ice sheets, are beginning to be recognized as an important part of Earth's biosphere. However, except for indirect indications of microbial assemblages in subglacial Lake Vostok, Antarctica, no sub-ice sheet environments have been shown to support microbial ecosystems. Here we report 16S rRNA gene and isolate diversity in sediments collected from beneath the Kamb Ice Stream, West Antarctic Ice Sheet and stored for 15 months at 4 degrees C. This is the first report of microbes in samples from the sediment environment beneath the Antarctic Ice Sheet. The cells were abundant ( approximately 10(7) cells g(-1)) but displayed low diversity (only five phylotypes), likely as a result of enrichment during storage. Isolates were cold tolerant and the 16S rRNA gene diversity was a simplified version of that found in subglacial alpine and Arctic sediments and water. Although in situ cell abundance and the extent of wet sediments beneath the Antarctic ice sheet can only be roughly extrapolated on the basis of this sample, it is clear that the subglacial ecosystem contains a significant and previously unrecognized pool of microbial cells and associated organic carbon that could potentially have significant implications for global geochemical processes.

Trophic ecology of two cold-water coral species from the Mediterranean Sea revealed by lipid biomarkers and compound-specific isotope analyses

NASA Astrophysics Data System (ADS)

Naumann, Malik S.; Tolosa, Imma; Taviani, Marco; Grover, Renaud; Ferrier-Pagès, Christine

2015-12-01

Scleractinian cold-water corals (CWC) act as key ecosystem engineers in deep-sea reef environments worldwide. However, our current understanding of their trophic ecology is still limited, particularly in understudied temperate oceanic regions such as the Mediterranean Sea. Hence, this study investigated the trophic ecology of the CWC Desmophyllum dianthus and Madrepora oculata by employing lipid biomarker techniques and compound-specific isotope analyses on coral tissues, suspended particulate organic matter (sPOM), and surface sediment sampled in a Mediterranean CWC habitat. CWC exhibited high contents of poly- and monounsaturated fatty acids (FA) (≥49 and 32 % of FA, respectively) and cholesterol (≥67 % of sterols), while sPOM and sediment samples were enriched in saturated FA (≥44 % of FA) and sitosterol (≥35 % of sterols). CWC contained some rare very long-chained polyunsaturated FA (>C22) and ergosterol absent in sPOM and sediment samples. Our results indicate that Mediterranean CWC mainly consume living food items, rather than detrital sPOM or resuspended sediment, and provide evidence for preferred feeding on omnivorous and carnivorous zooplankton. Overall, these findings provide new insights to the trophic ecology of two common CWC from the Mediterranean Sea.

Stable isotope fractionation of selenium by natural microbial consortia

USGS Publications Warehouse

Ellis, A.S.; Johnson, T.M.; Herbel, M.J.; Bullen, T.D.

2003-01-01

The mobility and bioavailability of Se depend on its redox state, and reduction of Se oxyanions to less mobile, reduced species controls transport of this potentially toxic element in the environment. Stable isotope fractionation of Se is currently being developed as an indicator of Se immobilization through reduction. In this study, Se isotope fractionation resulting from reduction of Se(VI) and Se(IV) oxyanions by natural microbial consortia was measured in sediment slurry experiments under nearly natural conditions, with no substrate added. Experiments were conducted with a wide range of initial Se concentrations and with sediment and water from three locations with contrasting environmental settings. The products of Se(VI) and Se(IV) reduction were enriched in the lighter isotopes relative to the reactants. Shifts of -2.60/00 to -3.10/00 and -5.50/00 to -5.70/00, respectively, were observed in the 80Se/76Se ratio. These isotopic fractionations did not depend significantly on initial Se concentrations, which were varied from 22 μg/l to 8 mg/l, or on geochemical differences among the sediments. These results provide estimates of Se isotope fractionation in organic-rich wetland environments but may not be appropriate for substrate-poor aquifers and marine sediments.

Dissolved inorganic nitrogen composition, transformation, retention, and transport in naturally phosphate-rich and phosphate-poor tropical streams

USGS Publications Warehouse

Triska, F.J.; Pringle, C.M.; Zellweger, G.W.; Duff, J.H.; Avanzino, R.J.

1993-01-01

In Costa Rica, the Salto River is enriched by geothermal-based soluble reactive phosphorus (SRP), which raises the concentration up to 200 ??g/L whereas Pantano Creek, an unimpacted tributary, has an SRP concentration <10 ??g/L. Ammonium concentration in springs adjacent to the Salto and Pantano was typically greater than channel water (13 of 22 locations) whereas nitrate concentration was less (20 of 22 locations). Ground waters were typically high in ammonium relative to nitrate whereas channel waters were high in nitrate relative to ammonium. Sediment slurry studies indicated nitrification potential in two sediment types, firm clay (3.34 ??g N.cm-3.d-1) and uncompacted organic-rich sediment (1.76 ??g N.cm-3.d-1). Ammonium and nitrate amendments to each stream separately resulted in nitrate concentrations in excess of that expected after correlation for dilution using a conservative tracer. SRP concentration was not affected by DIN amendment to either stream. SRP concentration in the Pantano appeared to be regulated by abiotic sediment exchange reactions. DIN composition and concentration were regulated by a combination of biotic and abiotic processes. -from Authors

Weak acid extractable metals in Bramble Bay, Queensland, Australia: temporal behaviour, enrichment and source apportionment.

PubMed

Brady, James P; Ayoko, Godwin A; Martens, Wayde N; Goonetilleke, Ashantha

2015-02-15

Sediment samples were taken from six sampling sites in Bramble Bay, Queensland, Australia between February and November in 2012. They were analysed for a range of heavy metals including Al, Fe, Mn, Ti, Ce, Th, U, V, Cr, Co, Ni, Cu, Zn, As, Cd, Sb, Te, Hg, Tl and Pb. Fraction analysis, Enrichment Factors and Principal Component Analysis-Absolute Principal Component Scores (PCA-APCS) were carried out in order to assess metal pollution, potential bioavailability and source apportionment. Cr and Ni exceeded the Australian Interim Sediment Quality Guidelines at some sampling sites, while Hg was found to be the most enriched metal. Fraction analysis identified increased weak acid soluble Hg and Cd during the sampling period. Source apportionment via PCA-APCS found four sources of metals pollution, namely, marine sediments, shipping, antifouling coatings and a mixed source. These sources need to be considered in any metal pollution control measure within Bramble Bay. Copyright © 2014 Elsevier Ltd. All rights reserved.

Ecological risk assessment of trace metal accumulation in sediments of Veraval Harbor, Gujarat, Arabian Sea.

PubMed

Sundararajan, S; Khadanga, Mukunda Kesari; Kumar, J Prince Prakash Jeba; Raghumaran, S; Vijaya, R; Jena, Basanta Kumar

2017-01-15

In this study, different types of indices were used to assess the ecological risk of trace metal contamination in sediments on the basis of sediment quality guidelines at Veraval Fishery Harbor. Sediment samples were collected from three sectors in pre-, post-, and monsoon seasons in 2006. Trace metal concentrations were higher in the inner sector during post-monsoon, and it showed the highest statistical significance (p<0.01) among the stations. Pollution load index was higher than unity, indicating alternation by effluent discharge from industries. Enrichment factor and geo-accumulation index showed that Cd, Pb, and Zn were enriched in the northern part of the harbor and Pb had accumulated in the harbor sediment. The ecological risk assessment index revealed that Ni, Zn, and Pb were higher than the effect range median values, indicating their potential toxicity to the aquatic environment in the Veraval Harbor. Hence, the harbor is dominated by anthropogenic activities rather than natural process. Copyright © 2016 Elsevier Ltd. All rights reserved.

Holocene facies analysis of the sedimentary record with anthropogenic impacts in the Ria de Vigo (NW Spain)

NASA Astrophysics Data System (ADS)

Rubio, B.; Garcia-Gil, S.; Vilas, F.; Garcia, A.

2004-05-01

The Ria de Vigo constitutes the southernmost ria of the Rias Bajas. The reconnaisance studies of this ria indicate a heterogeneous distribution of both terrigenous and carbonate sediments with a major axial deposit of cohesive sediments. These fine sediments are relatively rich in organic matter, particularly in the inner part of the ria. This is the result of a progressive change in hydrodynamic conditions along the ria. The outer parts are affected by severe storms in winter and by upwelling processes in summer, whilst the inner parts have an estuarine character throughout the year. The upwelling produces a marked increase in the biological productivity in the Ria and, consequently, these sediments have typically very high contents of organic matter. In recent years, increasing interest has been shown in the levels of heavy metals in sediments of the Galician Rias. Particularly, some of these studies showed a higher concentration of heavy metals in the muddiest surficial sediments in the Ria de Vigo. However, and despite of the important human and industrial settlement in the Galician rias, knowledge about the evolution of historical contamination along the Holocene sedimentary record is scarce. In order to ascertain this evolution have been selected 8 gravity corer located along the axial part of the ria. This evaluation was focused on the muddy sediments of the axial part of the ria due to the dependence of metal levels on grain size, resulting from the association of metals with the finer particles, as it has been demonstrated by previous studies in the ria. On these sediments, the combination of geochemical, mineralogical and sedimentological data, facies interpretations (obtained from x-ray radiography), and their integration with high resolution seismic data (Uniboom and 3.5 Khz subbottom profiler) have allowed to establish the evolution of certain heavy metals (Zn, Cu and Pb) along the Holocene recent sedimentary record in the Ria de Vigo. Sediments in the outer ria are comprised by muddy sands showing a very slight enrichment in certain heavy metals in the upper sediments. Contrary to facies in the outer ria sediments, facies in the inner ria comprises finer organic-rich sediments. These are related to the presence of biodeposits produced by mussel rafts and to a higher anthropogenic influence due to industrial activity. Both influences are notably reflected in the Cu, Zn and Pb vertical profiles, increasing markedly the levels of these metals in the uppermost 0.15 m of sediments. Diagenetic recycling may contribute to the enhancement of trace metal concentrations in the upper sediments of inner cores and also this is related to a higher content of organic carbon in these sediments. Results obtained in this ria constitutes a good reference to study other rias and coastal areas of the Iberian Atlantic margin. This work was funded by projects REN2003-02822 MAR, REN2003-03233 MAR, VEM2003-20093-C03-03 of the Spanish MCYT and PGDIT03RMA30101PR of the Galician Government (XUGA). Contribution No 302 XM2 group.

Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan

PubMed Central

Glombitza, Clemens; Adhikari, Rishi R.; Riedinger, Natascha; Gilhooly, William P.; Hinrichs, Kai-Uwe; Inagaki, Fumio

2016-01-01

Sulfate reduction is the predominant anaerobic microbial process of organic matter mineralization in marine sediments, with recent studies revealing that sulfate reduction not only occurs in sulfate-rich sediments, but even extends to deeper, methanogenic sediments at very low background concentrations of sulfate. Using samples retrieved off the Shimokita Peninsula, Japan, during the Integrated Ocean Drilling Program (IODP) Expedition 337, we measured potential sulfate reduction rates by slurry incubations with 35S-labeled sulfate in deep methanogenic sediments between 1276.75 and 2456.75 meters below the seafloor. Potential sulfate reduction rates were generally extremely low (mostly below 0.1 pmol cm−3 d−1) but showed elevated values (up to 1.8 pmol cm−3 d−1) in a coal-bearing interval (Unit III). A measured increase in hydrogenase activity in the coal-bearing horizons coincided with this local increase in potential sulfate reduction rates. This paired enzymatic response suggests that hydrogen is a potentially important electron donor for sulfate reduction in the deep coalbed biosphere. By contrast, no stimulation of sulfate reduction rates was observed in treatments where methane was added as an electron donor. In the deep coalbeds, small amounts of sulfate might be provided by a cryptic sulfur cycle. The isotopically very heavy pyrites (δ34S = +43‰) found in this horizon is consistent with its formation via microbial sulfate reduction that has been continuously utilizing a small, increasingly 34S-enriched sulfate reservoir over geologic time scales. Although our results do not represent in-situ activity, and the sulfate reducers might only have persisted in a dormant, spore-like state, our findings show that organisms capable of sulfate reduction have survived in deep methanogenic sediments over more than 20 Ma. This highlights the ability of sulfate-reducers to persist over geological timespans even in sulfate-depleted environments. Our study moreover represents the deepest evidence of a potential for sulfate reduction in marine sediments to date. PMID:27761134

Microbial Sulfate Reduction Potential in Coal-Bearing Sediments Down to ~2.5 km below the Seafloor off Shimokita Peninsula, Japan.

PubMed

Glombitza, Clemens; Adhikari, Rishi R; Riedinger, Natascha; Gilhooly, William P; Hinrichs, Kai-Uwe; Inagaki, Fumio

2016-01-01

Sulfate reduction is the predominant anaerobic microbial process of organic matter mineralization in marine sediments, with recent studies revealing that sulfate reduction not only occurs in sulfate-rich sediments, but even extends to deeper, methanogenic sediments at very low background concentrations of sulfate. Using samples retrieved off the Shimokita Peninsula, Japan, during the Integrated Ocean Drilling Program (IODP) Expedition 337, we measured potential sulfate reduction rates by slurry incubations with 35 S-labeled sulfate in deep methanogenic sediments between 1276.75 and 2456.75 meters below the seafloor. Potential sulfate reduction rates were generally extremely low (mostly below 0.1 pmol cm -3 d -1 ) but showed elevated values (up to 1.8 pmol cm -3 d -1 ) in a coal-bearing interval (Unit III). A measured increase in hydrogenase activity in the coal-bearing horizons coincided with this local increase in potential sulfate reduction rates. This paired enzymatic response suggests that hydrogen is a potentially important electron donor for sulfate reduction in the deep coalbed biosphere. By contrast, no stimulation of sulfate reduction rates was observed in treatments where methane was added as an electron donor. In the deep coalbeds, small amounts of sulfate might be provided by a cryptic sulfur cycle. The isotopically very heavy pyrites (δ 34 S = +43‰) found in this horizon is consistent with its formation via microbial sulfate reduction that has been continuously utilizing a small, increasingly 34 S-enriched sulfate reservoir over geologic time scales. Although our results do not represent in-situ activity, and the sulfate reducers might only have persisted in a dormant, spore-like state, our findings show that organisms capable of sulfate reduction have survived in deep methanogenic sediments over more than 20 Ma. This highlights the ability of sulfate-reducers to persist over geological timespans even in sulfate-depleted environments. Our study moreover represents the deepest evidence of a potential for sulfate reduction in marine sediments to date.

Occurrence and speciation of arsenic and mercury in estuarine sediments affected by mining activities (Asturias, northern Spain).

PubMed

Garcia-Ordiales, Efrén; Covelli, Stefano; Rico, Jose Manuel; Roqueñí, Nieves; Fontolan, Giorgio; Flor-Blanco, German; Cienfuegos, Pablo; Loredo, Jorge

2018-05-01

Sediments contaminated by Hg and As from two historical mining areas have been deposited in the Nalón estuary (Asturias, northern Spain) since 1850. Total mercury (Hg total ) concentrations in the sediments range from 0.20 μg g -1 to 1.33 μg g -1 , most of it in the form of sulphides. Concentrations of methylmercury (303.20-865.40 pg g -1 ) are up to two orders of magnitude lower than the concentration of Hg total . Total As concentration (As total ) is enriched compared to the background level for the area. The relative abundance of As(V) on As(III) in the sediments ranges from 97.6% to 100%, whereas inorganic Hg accounts for more than 99% of the total Hg. The occurrence of the most toxic species, inorganic As(III) and organic methylmercury, seem to be related to redox conditions together with the amounts of sulphur which act as natural barriers which inhibit the biological and chemical speciation processes. Despite the high amounts of Hg and As present in the sediments, their transference to the water column appear to be limited thus converting sediments in an effective sink of both elements. Special attention should be paid to potential variations of the environmental conditions which might increase the element mobility and exchange between sediments and the water column. Copyright © 2018 Elsevier Ltd. All rights reserved.

The effects of co-contaminants and native wetland sediments on the activity and dominant transformation mechanisms of a 1,1,2,2-tetrachloroethane (TeCA)-degrading enrichment culture

USGS Publications Warehouse

Lorah, Michelle M.; Schiffmacher, Emily N.; Becker, Jennifer G.; Voytek, Mary A.

2016-01-01

Bioremediation strategies, including bioaugmentation with chlorinated ethene-degrading enrichment cultures, have been successfully applied in the cleanup of subsurface environments contaminated with tetrachloroethene (PCE) and/or trichloroethene (TCE). However, these compounds are frequently found in the environment as components of mixtures that may also contain chlorinated ethanes and methanes. Under these conditions, the implementation of bioremediation may be complicated by inhibition effects, particularly when multiple dehalorespirers are present. We investigated the ability of the 1,1,2,2-tetrachloroethane (TeCA)-dechlorinating culture WBC-2 to biotransform TeCA alone, or a mixture of TeCA plus PCE and carbon tetrachloride (CT), in microcosms. The microcosms contained electron donors provided to biostimulate the added culture and sediment collected from a wetland where numerous “hotspots” of contamination with chlorinated solvent mixtures exist. The dominant TeCA biodegradation mechanism mediated by the WBC-2 culture in the microcosms was different in the presence of these wetland sediments than in the sediment-free enrichment culture or in previous WBC-2 bioaugmented microcosms and column tests conducted with wetland sediment collected at nearby sites. The co-contaminants and their daughter products also inhibited TeCA biodegradation by WBC-2. These results highlight the need to conduct biodegradability assays at new sites, particularly when multiple contaminants and dehalorespiring populations are present.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lockhart, L.; Ramial, K.; Wilkinson, P.

Mercury concentrations were measured in sediment cores from lakes in central and northern Canada. Typically cores spanned periods of one hundred to several hundred years, as judged by profiles of unsupported lead-210 and cesium-137. Mercury in the uppermost slices of sediment from lakes in more easterly locations was consistently elevated above that in deeper slices from the same lakes. The authors have interpreted this surface enrichment as evidence of increased recent loadings in agreement with similar studies in Ontario, Quebec, USA and Scandinavia. Western sites showed less surface enrichment with mercury, sometimes almost none, in agreement with experience in Alaska.more » Surface grab samples and two deep cores from Lake Winnipeg indicated that mercury in surface sediments exceeded that at depths corresponding to several thousand years in the history of the lake. The current indication from the cores is a regional difference in loadings of mercury with higher enrichments over basal values in the East than in the West. Recent literature, however, has raised the possibility of vertical mobility of mercury in sediments. This has suggested that processes controlling the well-known concentration of iron and manganese in oxidized surface sediments may also concentrate mercury. A number of the cores were analyzed for iron and manganese but mercury (or lead or cadmium) failed to correlate with iron or manganese. Efforts are underway to develop ways to distinguish rigorously between natural mercury and contamination.« less

Accumulation of toxic metals and organic micro-pollutants in sediments from tropical urban rivers, Kinshasa, Democratic Republic of the Congo.

PubMed

Kilunga, Pitchouna I; Sivalingam, Periyasamy; Laffite, Amandine; Grandjean, Dominique; Mulaji, Crispin K; de Alencastro, Luiz Felippe; Mpiana, Pius T; Poté, John

2017-07-01

The increasing contamination of fresh water resource by toxic metals and Persistence Organic Pollutants (POPs) is a major environmental concern globally. In the present investigation, surface sediments collected from three main rivers named, Makelele, Kalamu and Nsanga, draining through the city of Kinshasa, Democratic Republic of the Congo, were characterized for grain size, organic matter, toxic metals, POPs (including organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs)), and polycyclic aromatic hydrocarbons (PAHs). Furthermore, enrichment factor (EF) and geoaccumulation index (Igeo) were performed to determine metal source and pollution status. The results highlighted high concentration of toxic metals in all sediment samples, reaching the values (mg kg -1 ) of 325 (Cu), 549 (Zn), 165 (Pb) and 1.5 (Cd). High values of PCBs and OCPs were detected in sediment samples, e.g. in Makelele river, PCB values ranged from 0.9 to 10.9 with total PCBs (∑7 PCBs × 4.3): 169.3 μg kg -1 ; OCPs from 21.6 to 146.8 with ∑OCPs: 270.6 μg kg -1 . The PBDEs concentrations were higher in investigated rivers comparatively with values detected in many rivers from Sub-Saharan Africa. The ΣPAHs value ranged from 22.6 to 1011.9 μg kg -1 . River contamination may be explained by local intense domestic activities, urban and agricultural runoff, industrial and hospital wastewaters discharge into the rivers without prior treatment. This research provides not only a first baseline information on the extent of contamination in this tropical ecosystem but also represents useful tools incorporated to evaluate sediment quality in the river receiving systems which can be applied to similar aquatic environments. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil organic matter as an important contributor to Late Quaternary sediments of the tropical West African continental margin

NASA Astrophysics Data System (ADS)

Holtvoeth, Jens; Kolonic, Sadat; Wagner, Thomas

2005-04-01

The contribution of soil organic matter (SOM) to continental margins is largely ignored in studies on the carbon budget of marine sediments. Detailed geochemical investigations of late Quaternary sediments (245-0 ka) from the Niger and Congo deep-sea fans, however, reveal that C org/N tot ratios and isotopic signatures of bulk organic matter (δ 13C org) in both fans are essentially determined by the supply of various types of SOM from the river catchments thus providing a fundamentally different interpretation of established proxies in marine sciences. On the Niger fan, increased C org/N tot and δ 13C org (up to -17‰) were driven by generally nitrogen-poor but 13C-enriched terrigenous plant debris and SOM from C 4/C 3 vegetation/Entisol domains (grass- and tree-savannah on young, sandy soils) supplied during arid climate conditions. Opposite, humid climates supported drainage of C 3/C 4 vegetation/Alfisol/Ultisol domains (forest and tree-savannah on older/developed, clay-bearing soils) that resulted in lower C org/N tot and δ 13C org (< -20‰) in the Niger fan record. Sediments from the Congo fan contain a thermally stable organic fraction that is absent on the Niger fan. This distinct organic fraction relates to strongly degraded SOM of old and highly developed, kaolinite-rich ferallitic soils (Oxisols) that cover large areas of the Congo River basin. Reduced supply of this nitrogen-rich and 12C-depleted SOM during arid climates is compensated by an elevated input of marine OM from the high-productive Congo up-welling area. This climate-driven interplay of marine productivity and fluvial SOM supply explains the significantly smaller variability and generally lower values of C org/N tot and δ 13C org for the Congo fan records. This study emphasizes that ignoring the presence of SOM results in a severe underestimation of the terrigenous organic fraction leading to erroneous paleoenvironmental interpretations at least for continental margin records. Furthermore, burial of SOM in marine sediments needs more systematic investigation combining marine and continental sciences to assess its global relevance for long-term sequestration of atmospheric CO 2.

Deep-Sea Nematodes Actively Colonise Sediments, Irrespective of the Presence of a Pulse of Organic Matter: Results from an In-Situ Experiment

PubMed Central

Guilini, Katja; Soltwedel, Thomas; van Oevelen, Dick; Vanreusel, Ann

2011-01-01

A colonisation experiment was performed in situ at 2500 m water depth at the Arctic deep-sea long-term observatory HAUSGARTEN to determine the response of deep-sea nematodes to disturbed, newly available patches, enriched with organic matter. Cylindrical tubes,laterally covered with a 500 µm mesh, were filled with azoic deep-sea sediment and 13C-labelled food sources (diatoms and bacteria). After 10 days of incubation the tubes were analysed for nematode response in terms of colonisation and uptake. Nematodes actively colonised the tubes,however with densities that only accounted for a maximum of 2.13% (51 ind.10 cm−2) of the ambient nematode assemblages. Densities did not differ according to the presence or absence of organic matter, nor according to the type of organic matter added. The fact that the organic matter did not function as an attractant to nematodes was confirmed by the absence of notable 13C assimilation by the colonising nematodes. Overall, colonisationappears to be a process that yields reproducible abundance and diversity patterns, with certain taxa showing more efficiency. Together with the high variability between the colonising nematode assemblages, this lends experimental support to the existence of a spatio-temporal mosaic that emerges from highly localised, partially stochastic community dynamics. PMID:21526147

Rare-earth elements enrichment of Pacific seafloor sediments: the view from volcanic islands of Polynesia

NASA Astrophysics Data System (ADS)

Melleton, Jérémie; Tuduri, Johann; Pourret, Olivier; Bailly, Laurent; Gisbert, Thierry

2014-05-01

Rare-earth elements (REEs) are key metals for «green» technologies such as energy saving lamps or permanent magnets used in, e.g., wind turbines, hard disk drives, portable phone or electric or hybrid vehicles. Since several years, world demand for these metals is therefore drastically increasing. The quasi-monopolistic position of China, which produces around 95 % of global REEs production, generates risks for the industries that depend on a secure supply of REEs. In response, countries are developing and diversifying their supply sources, with new mining projects located outside China and efforts in the area of REEs recycling. Most of these projects focus on deposits related to carbonatites and alkaline-peralkaline magmatism, which are generally enriched in light REEs (LREEs) compared to the heavy REEs (HREEs)-enriched deposits of the ion-adsorption types, located in southern China. However, a recent study revealed new valuable resources corresponding to seafloor sediments located in the south-eastern and north-central Pacific. The deep-sea mud described by these authors show a higher HREE/LREE ratio than ion-adsorption deposits, a feature which significantly increases their economic interest. The authors suggest mid-ocean ridge hydrothermal activity as an explanation to this anomalous enrichment. However, several contributions have documented considerable REEs enrichment in basalts and peridotitic xenoliths from French Polynesia. Several arguments have been exposed in favour of a supergene origin, with a short migration, suggesting that REEs were collected from weathered basalts. The Tahaa volcanic island (Sous-le-Vent Island, Society Archipelago, French Polynesia) is the first location where such enrichment has been described. New petrographic and mineralogical investigations confirm a supergene mobilization of this abnormal occurrence. REE-bearing minerals (mainly phosphates of the rhabdophane group) are primarily located within basalt vesicles but also in crack that cross-cut the calcite filling the vesicles or the volcanic glass. They are also closely associated with Ni-Mg bearing phyllosilicates, which appear to nucleate from alteration of olivine and clinopyroxenes. Further investigations are done to evidence and confirm an anterior magmatic enrichment. On the basis of these observations, we believe that the anomalous enrichment observed in seafloor sediments could derive from abnormally-rich provinces corresponding to aerial basaltic formations from oceanic islands primarily enriched during weathering processes (Melleton et al., 2014). Melleton et al. (2014). Rare-earth elements enrichment of Pacific sea-floor sediments: the view from volcanic islands of Polynesia. In preparation.

Mass burden and estimated flux of heavy metals in Pakistan coast: sedimentary pollution and eco-toxicological concerns.

PubMed

Ali, Usman; Malik, Riffat Naseem; Syed, Jabir Hussain; Mehmood, Ch Tahir; Sánchez-García, Laura; Khalid, Azeem; Chaudhry, Muhammad Jamshed Iqbal

2015-03-01

Heavy-metal contamination in coastal areas poses a serious threat to aquatic life and public health due to their high toxicity and bio-accumulation potential. In the present study, levels of different heavy metals (Cu, Cd, Cr, Ni, Co, Pb, Zn, and Mn), their spatial distribution, geochemical status, and enrichment indices (Cu, Cd, Cr, Ni, Co, Pb, Zn) were investigated in the sediment samples from 18 coastal sites of Pakistan. The analyses of coastal sediments indicated the presence of heavy metals in order such as Cr > Zn > Cu > Pb > Ni > Mn > Co > Cd. Geo-accumulation index (I geo), enrichment factor (EF), and contamination factor (CF) showed diverse range in heavy-metal enrichment site by site. Pollution load index (PLI) has shown that average pollution load along the entire coastal belt was not significant. Based on the mean effect range medium quotient, coastal sediments of Pakistan had 21% probability of toxicity. The estimated sedimentary load of selected heavy metals was recorded in the range of 0.3-44.7 g/cm(2)/year, while the depositional flux was in the range of 0.07-43.5 t/year. Heavy-metal inventories of 9.8 × 10(2)-3.8 × 10(5) t were estimated in the coastal sediments of Pakistan. The enrichment and contamination factors (EF and CF) suggested significant influence of anthropogenic and industrial activities along the coastal belt of Pakistan.

A twisted tale - how biocorrosion communities yield new insight on the distribution of marine iron-oxidizing bacteria

NASA Astrophysics Data System (ADS)

McBeth, J. M.; Emerson, D.

2011-12-01

Microbiologically influenced corrosion (MIC) of mild steel is a complex process involving biogeochemical interactions between bacteria, steel surfaces, and biogenic and abiotically produced minerals. The role of neutrophilic iron-oxidizing bacteria (FeOB) in this process is poorly understood, and surprisingly, little is known about the microbial ecology of corroding steel in marine environments. Based on previous work (McBeth et al 2011), we hypothesized that coastal sediments act as reservoirs for marine FeOB of the candidatus class 'Zetaproteobacteria', and that these bacteria will colonize and become numerically abundant on steel surfaces. To test this, mild steel coupons were incubated in a salt marsh and sampled over 40 days in summer 2010. DNA extracted from the steel surfaces was analyzed for overall bacterial diversity by pyrosequencing of the V4 variable region of the 16S rRNA gene, and relevant communities were quantified using qPCR. The qPCR analyses were done using 16S primers specific to prokaryotes (Takai & Horikoshi 2000) and Zetaproteobacteria (Kato et al 2009), and a dsrA gene specific primer (Ben-Dov et al 2007) to assess the population of sulfate-reducing bacteria (SRB). Pyrosequencing data analyses showed Zetaproteobacteria were present on steel samples throughout the incubations and were also present in adjacent sediments; however, the diversity of Zetaproteobacteria was lower on the steel in comparison with sediments, indicating specific populations were enriched on the steel coupons. Iron oxyhydroxide stalk biosignatures were observed on the steel and in enrichment cultures, evidence that the Zetaproteobacteria identified using molecular techniques were likely FeOB. Relatives of the H2-oxidizing genus Hydrogenophaga and members of the family Rhodobacterales were also identified as important members of the biocorrosion community and were present both on steel and in sediments. The diversity of these organisms on steel surfaces increased with incubation time. The populations assessed with qPCR remained fairly constant in the sediments during the course of the study. The number of Zetaproteobacteria in the sediments was approximately 10 fold lower than the SRB numbers. In contrast, the proportion of Zetaproteobacteria present on the steel increased rapidly over the first 10 days, exceeding the copy numbers present in the sediment by an order of magnitude. The SRB numbers on the steel were 10 fold lower than in sediments during the first days of incubation, but increased with time to near the sediment numbers of SRB at 40 days. The proportion of SRB in sediments was relatively high and constant. This work illustrates that coastal sediments may be a hitherto unrecognized reservoir for Zetaproteobacteria who, though numerically low in the sediment, can quickly colonize environments where free Fe(II) is abundant.

Importance of Dissolved Neutral Hg-Sulfides, Energy Rich Organic Matter and total Hg Concentrations for Methyl Mercury Production in Sediments

NASA Astrophysics Data System (ADS)

Drott, A.; Skyllberg, U.

2007-12-01

Methyl mercury (MeHg) is the mercury form that biomagnifies to the greatest extent in aquatic food webs. Therefore information about factors determining MeHg concentrations is critical for accurate risk assessment of contaminated environments. The concentration of MeHg in wetlands and sediments is the net result of: 1) methylation rates, 2) demethylation rates, and 3) input/output processes. In this study, the main controls on Hg methylation rates and total concentrations of MeHg, were investigated at eight sites in Sweden with sediments that had been subjected to local Hg contamination either as Hg(0), or as phenyl-Hg. Sediments were selected to represent a gradient in total Hg concentration, temperature climate, salinity, primary productivity, and organic C content and quality. Most sediments were high in organic matter content due to wood fibre efflux from pulp and paper industry. The pore water was analysed for total Hg, MeHg, DOC, H2S(aq), pH, DOC, Cl and Br. The chemical speciation of Hg(II) and MeHg in pore water was calculated using equilibrium models. Potential methylation and demethylation rates in sediments were determined in incubation experiments at 23° C under N2(g) for 48 h, after addition of isotopically enriched 201Hg(II) and Me204Hg. In all surface (0-20 cm) sediments there was a significant (p<0.001) positive relationship between the experimentally determined specific potential methylation rate constant (Km, day-1) and % MeHg (concentrations of MeHg normalized to total Hg) in the sediment. This indicates that MeHg production overruled degradation and input/output processes of MeHg in surface sediments, and that % MeHg in surface sediments may be used as a proxy for net production of MeHg. To our knowledge, these are the first data showing significant positive relationships between short term (48 h) MeHg production and longer term accumulation of MeHg, across a range of sites with different properties (1). If MeHg was not normalized to total Hg, the relationship was not significant. For sub-sets of brackish waters (p<0.001, n=23), southern, high-productivity freshwaters (p<0.001, n=20) as well as northern, low-productivity freshwater (p=0.048, n=6), the sum of neutral Hg-sulfides [Hg(SH)20 (aq)] and [HgS0 (aq)] in the sediment pore water was significantly, positively correlated with both the potential methylation rate constant (Km) and total MeHg concentrations (2). This indicates that methylating sulphate reducing bacteria passively take up neutral Hg-sulfides, which are transformed to MeHg. Differences in slopes of the relationships were explained by differences in primary productivity and availability of energy-rich organic matter to methylating bacteria. High primary productivity at southern freshwater sites, reflected by a low C/N ratio (large contribution from free living algae and bacteria) in the sediment and a high annual temperature sum, resulted in high methylation rates. In conclusion, concentrations of neutral Hg-sulfides and availability of energy rich organic matter, but also total Hg concentrations in sediments are important factors behind net production and accumulation of MeHg . References: (1) Drott et. al. submitted, (2) Drott, A.; Lambertsson, L.; Björn, E.; Skyllberg, U. Importance of dissolved neutral mercury sulfides for methyl mercury production in contaminated sediments. Environmental Science & Technology 2007, 41, 2270-2276.

Rapid Sediment Accumulation Results in High Methane Effluxes from Coastal Sediments

PubMed Central

Lenstra, Wytze; Jong, Dirk; Meysman, Filip J. R.; Sapart, Célia J.; van der Veen, Carina; Röckmann, Thomas; Gonzalez, Santiago; Slomp, Caroline P.

2016-01-01

Globally, the methane (CH4) efflux from the ocean to the atmosphere is small, despite high rates of CH4 production in continental shelf and slope environments. This low efflux results from the biological removal of CH4 through anaerobic oxidation with sulfate in marine sediments. In some settings, however, pore water CH4 is found throughout the sulfate-bearing zone, indicating an apparently inefficient oxidation barrier for CH4. Here we demonstrate that rapid sediment accumulation can explain this limited capacity for CH4 removal in coastal sediments. In a saline coastal reservoir (Lake Grevelingen, The Netherlands), we observed high diffusive CH4 effluxes from the sediment into the overlying water column (0.2–0.8 mol m-2 yr-1) during multiple years. Linear pore water CH4 profiles and the absence of an isotopic enrichment commonly associated with CH4 oxidation in a zone with high rates of sulfate reduction (50–170 nmol cm-3 d-1) both suggest that CH4 is bypassing the zone of sulfate reduction. We propose that the rapid sediment accumulation at this site (~ 13 cm yr-1) reduces the residence time of the CH4 oxidizing microorganisms in the sulfate/methane transition zone (< 5 years), thus making it difficult for these slow growing methanotrophic communities to build-up sufficient biomass to efficiently remove pore water CH4. In addition, our results indicate that the high input of organic matter (~ 91 mol C m-2 yr-1) allows for the co-occurrence of different dissimilatory respiration processes, such as (acetotrophic) methanogenesis and sulfate reduction in the surface sediments by providing abundant substrate. We conclude that anthropogenic eutrophication and rapid sediment accumulation likely increase the release of CH4 from coastal sediments. PMID:27560511

Changes in particle size distribution of suspended sediment affected by gravity erosion on the Loess Plateau, China

NASA Astrophysics Data System (ADS)

Guo, Wen-Zhao; Xu, Xiang-Zhou; Liu, Ya-Kun; Zhang, Hong-Wu; Zhu, Ming-Dong

2017-04-01

Gravity erosion generates an enormous volume of sediment on the steep hillslopes throughout the world, yet the response from particle size distribution (PSD) of suspended sediment to mass failure remains poorly understood. Here rainfall simulation experiments were conducted on the natural loess slopes to induce a series of mass failures under rainfall intensity of 48 mm h-1, and then an index of enrichment/dilution ratio was used to quantitatively explore the change trend of suspended sediment PSD affected by gravity erosion. To determine suspended sediment, water samples were collected in a polyethylene bottle directly from the gully runoff and channel flow in the pre and during- slope failures events. Then, the particle fractions of samples were done by combining sieving method and photoelectric sedimentometer technique. The results are shown as follows: (1) Gravity erosion has a significant influence on the particle size distribution of suspended sediment. As the mass erosion occurred, the proportion of sand-sized particles was decreased from 71.2 to 50.8%, whereas the proportions of clay and silt were increased remarkably from 1.3 to 7.3% and 27.5 to 41.9%, respectively. Hence the sediment can be more easily transported into channel flow while the suspended sediment load becomes finer as gravitational erosion occurs. (2) The median particle size (d50), sediment heterogeneity (H) and fractal dimensions (D) were significantly correlated with gravity erosion. As a result, d50 was decreased from 0.084 to 0.051 mm, H was increase from 5.6 to 26.8, and D was magnified from 2.60 to 2.78. This implies that mass failure makes the particle size distribution of suspended sediment more nonuniform and irregular. (3) Suspended sediment tended to enrich in the silt and clay fractions, while it diluted in the sand fractions during landslide erosion. Meanwhile, the enrichment/dilution ratios were 13.9 for the clay fractions, 1.4 for clay, and 0.7 for sand. This reflects the particle size selectivity of sediment mobilization on hillslope, and the selectivity of sediment delivery and transport from hillslope to channel. The results have important implications for understanding the connectivity between gravity erosion and sediment discharge to hydrological processes occurring on the hillslope.

Development and composition of a mixed culture for bioremediation of chlorinated ethenes and ethanes

USGS Publications Warehouse

Jones, E.J.P.; Voytek, M.A.; Lorah, M.M.

2005-01-01

Microbial organisms capable of dechlorinating 1,1,2,2 tetrachloroethane (TeCA) and its chlorinated ethane and ethylene daughter products were enriched in surface sediments collected from the West Branch Canal Creek wetland area, leading to the formation of two mixed cultures using slightly different enrichment methods. Both WBC-1 and WBC-2 were capable of rapid and complete reductive dechlorination of TeCA and its daughter products (1,1,2-trichloroethane, 1,2-dichloroethane, trichloroethylene, 1,2-dichloroethylene, and vinyl chloride) to ethylene, and addition of either culture to wetland sediment and to engineered peat/compost mixtures resulted in significant enhancement of dechlorination. However, the WBC-2 culture supported better sustained activity and was more readily scaled up for application in bioaugmentation treatments, whereas dechlorination activity was gradually lost in WBC-1. The microbial composition of WBC-1 and WBC-2 were determined by cloning and sequencing 500 base pairs of the 16S rDNA gene and the methyl co-reductase. Methanogens identified in the consortia were members of the Order Methanomicrobiales, which includes acetoclastic methanogens. This is an abstract of a paper presented at the Proceedings of the 8th International In Situ and On-Site Bioremediation Symposium (Baltimore, MD 6/6-9/2005).

Metal mobilisation in hydrothermal sediments at the TAG Hydrothermal Field (MAR, 26°N)

NASA Astrophysics Data System (ADS)

Dutrieux, A. M.; Lichtschlag, A.; Martins, S.; Barriga, F. J.; Petersen, S.; Murton, B. J.

2017-12-01

Metalliferous sediments in the vicinity of hydrothermal systems are enriched in base metals, but few studies have addressed their potential as mineral resources. These metalliferous sediments have been accumulated by different processes and reflect modifications of the primary mineral deposits by: oxidation of the chimney materials, in situ precipitation of low-temperature minerals and mass wasting. To understand the post-formation processes in metalliferous sediments, we investigated sub-seafloor metal mobilisation in different geological environments. This presentation focuses on the TAG Hydrothermal Field (Mid-Atlantic Ridge, 26°N) and explores sediment and pore water compositions using ICP-MS and ICP-OES. We use reactive transport modelling to interpret the degree of metal remobilisation and to identify the most important geochemical reactions in the different sediments. The pore water concentrations measured in sediments above inactive sulphide mounds present constant major elements composition that indicates this environment is dominated by complete exchange with seawater. The sediments, that are mainly composed of hematite and goethite formed during the oxidation of sulphides, have low Cu concentrations (< 0.1%) and the main part of their primary Cu and Zn content has likely been mobilized. Cu concentrations increase at the edges of the mounds (up to wt. 20%) or in distal depositionary channels (up to wt.10%) where sulphide minerals (e.g. pyrite, chalcopyrite and sphalerite) are still present in the sediments and capped by more recent sediment slumping. In the depositionary channels, pore waters show metal concentrations affected by diagenesis and redox-sensitive metals are released at depth (e.g. Mn2+ and Cu2+). The leaching of the primary sulphides (e.g. deprecated grains of chalcopyrite), and metal mobilisation lead to an enrichment of Cu and Zn at shallower depth. Here, some stratigraphic horizons scavenge metallic cations back into solid phases and form Mn-oxide crusts between 30 and 60 cm, in which Cu concentrations also increase. Our results demonstrate that metal mobilisation differs depending on the geological environment and their related accumulation processes, causing the absence of Cu on the top of inactive hydrothermal mounds but enriched in more distal sediment basins.

Seismic peak amplitude as a predictor of TOC content in shallow marine sediments

NASA Astrophysics Data System (ADS)

Neto, Arthur Ayres; Mota, Bruno Bourguignon; Belem, André Luiz; Albuquerque, Ana Luiza; Capilla, Ramsés

2016-10-01

Acoustic remote sensing is a highly effective tool for exploring the seafloor of both deep and shallow marine settings. Indeed, the acoustic response depends on several physicochemical factors such as sediment grain size, bulk density, water content, and mineralogy. The objective of the present study is to assess the suitability of seismic peak amplitude as a predictor of total organic carbon (TOC) content in shallow marine sediments, based on data collected in the Cabo Frio mud belt in an upwelling zone off southeastern Brazil. These comprise records of P-wave velocity ( V P) along 680 km of high-resolution single-channel seismic surveys, combined with analyses of grain size, wet bulk density, absolute water content and TOC content for four piston-cores. TOC contents of sediments from 13 box-cores served to validate the methodology. The results show well-defined positive correlations between TOC content and mean grain size (phi scale) as well as absolute water content, and negative correlations with V P, wet bulk density, and acoustic impedance. These relationships yield a regression equation by which TOC content can be satisfactorily predicted on the basis of acoustic impedance for this region: y = - 4.84 ln( x) + 40.04. Indeed, the derived TOC contents differ by only 5% from those determined by geochemical analysis. After appropriate calibration, acoustic impedance can thus be conveniently used as a predictor of large-scale spatial distributions of organic carbon enrichment in marine sediments. This not only contributes to optimizing scientific project objectives, but also enhances the cost-effectiveness of marine surveys by greatly reducing the ship time commonly required for grid sampling.

Pathways for arsenic from sediments to groundwater to streams: Biogeochemical processes in the Inner Coastal Plain, New Jersey, USA

USGS Publications Warehouse

Barringer, Julia L.; Mumford, Adam; Young, Lily Y.; Reilly, Pamela A.; Bonin, Jennifer L.; Rosman, Robert

2010-01-01

The Cretaceous and Tertiary sediments that underlie the Inner Coastal Plain of New Jersey contain the arsenic-rich mineral glauconite. Streambed sediments in two Inner Coastal Plain streams (Crosswicks and Raccoon Creeks) that traverse these glauconitic deposits are enriched in arsenic (15–25 mg/kg), and groundwater discharging to the streams contains elevated levels of arsenic (>80 μg/L at a site on Crosswicks Creek) with arsenite generally the dominant species. Low dissolved oxygen, low or undetectable levels of nitrate and sulfate, detectable sulfide concentrations, and high concentrations of iron and dissolved organic carbon (DOC) in the groundwater indicate that reducing environments are present beneath the streambeds and that microbial activity, fueled by the DOC, is involved in releasing arsenic and iron from the geologic materials. In groundwater with the highest arsenic concentrations at Crosswicks Creek, arsenic respiratory reductase gene (arrA) indicated the presence of arsenic-reducing microbes. From extracted DNA, 16s rRNA gene sequences indicate the microbial community may include arsenic-reducing bacteria that have not yet been described. Once in the stream, iron is oxidized and precipitates as hydroxide coatings on the sediments. Arsenite also is oxidized and co-precipitates with or is sorbed to the iron hydroxides. Consequently, dissolved arsenic concentrations are lower in streamwater than in the groundwater, but the arsenic contributed by groundwater becomes part of the arsenic load in the stream when sediments are suspended during high flow. A strong positive relation between concentrations of arsenic and DOC in the groundwater samples indicates that any process—natural or anthropogenic—that increases the organic carbon concentration in the groundwater could stimulate microbial activity and thus increase the amount of arsenic that is released from the geologic materials.

Influence of seasonal variation and anthropogenic activity on phosphorus cycling and retention in mangrove sediments: A case study in China

NASA Astrophysics Data System (ADS)

Jiang, Shan; Lu, Haoliang; Liu, Jingchun; Lin, Yushan; Dai, Minyue; Yan, Chongling

2018-03-01

Mangroves are known for sequestering and storing large quantities of phosphorus (P) within their sediments. In the present study, the sediment P cycle (including phosphatase activity intensity, total sedimentary P, P fractions distinguished by a sequential extraction method, as well as diffusion-adsorption processes) in a mangrove swamp in a subtropical estuary in China was studied. In the spring, the acid phosphatase activity varied between 1.3 and 1.9 units in the four sites in the estuary. The activity of alkaline phosphatase varied from 0.8 to 1.4 units. The total sedimentary P ranged from 821 to 1689 mg kg-1 with a dominance of redox-sensitive (Fe/Al bound) P. In the autumn, activities of both phosphatases and the total sediment P amount increased, probably due to enhanced inputs of organic matter and Fe oxides. In addition to seasonal variation, P in the mangrove sediment was influenced by anthropogenic activities. In particular, redox-sensitive P decreased significantly while phosphatase activity increased in the site that was flushed with aquaculture pond effluents. In contrast, sediment P enrichment was observed in the site that received domestic sewage. Both sources of anthropogenic P increased the eutrophication risk of the mangrove sediment because of a decrease in the amount of P adsorption and an enhancement of P release via diffusion. Diesel contamination due to the presence of a dock depressed phosphatase activity in the surficial sediment. The overlap between seasonal rhythm and human influences may introduce significant variations in P cycling, which warrants further attention from coastal management.

Impact of rapid urbanisation and industrialisation on river sediment metal contamination.

PubMed

Hayzoun, H; Garnier, C; Durrieu, G; Lenoble, V; Bancon-Montigny, C; Ouammou, A; Mounier, S

2014-05-01

This study aimed at evidencing contaminant inputs from a rapidly growing population and the accompanying anthropogenic activities to river sediments. The Fez metropolitan area and its impacts on the Sebou's sediments (the main Moroccan river) were chosen as a case study. The Fez agglomeration is surrounded by the river Fez, receiving the wastewaters of this developing city and then flowing into the Sebou. The sediment cores from the Fez and Sebou Rivers were extracted and analysed for major elements, butyltins and toxic metals. Normalised enrichment factors and geoaccumulation index were calculated. Toxicity risk was assessed by two sets of sediment quality guideline (SQG) indices. A moderate level of contamination by butyltins was observed, with monobutyltin being the dominant species across all sites and depths. The lowest level of metal pollution was identified in the Sebou's sediments in upstream of Fez city, whilst the Fez' sediments were heavily polluted and exhibited bottom-up accumulation trends, which is a clear signature of recent inputs from the untreated wastewaters of Fez city. Consequently, the sediments of Fez and Sebou at the downstream of the confluence were found to be potentially toxic, according to the SQG levels. This finding is concerned with aquatic organisms, as well as to the riverside population, which is certainly exposed to these pollutants through the daily use of water. This study suggests that although Morocco has adopted environmental regulations aiming at restricting pollutant discharges into the natural ecosystems, such regulations are neither well respected by the main polluters nor efficiently enforced by the authorities.

Isolation and characterization of a hydrocarbonoclastic bacterial enrichment from total petroleum hydrocarbon contaminated sediments: potential candidates for bioaugmentation in bio-based processes.

PubMed

Di Gregorio, Simona; Siracusa, Giovanna; Becarelli, Simone; Mariotti, Lorenzo; Gentini, Alessandro; Lorenzi, Roberto

2016-06-01

Seven hydrocarbonoclastic new bacterial isolates were isolated from dredged sediments of a river estuary in Italy. The sediments were contaminated by shipyard activities since decades, mainly ascribable to the exploitation of diesel oil as the fuel for recreational and commercial navigation of watercrafts. The bacterial isolates were able to utilize diesel oil as sole carbon source. Their metabolic capacities were evaluated by GC-MS analysis, with reference to the depletion of both the normal and branched alkanes, the nC18 fatty acid methyl ester and the unresolved complex mixture of organic compounds. They were taxonomically identified as different species of Stenotrophomonas and Pseudomonas spp. by the combination of amplified ribosomal DNA restriction analysis (ARDRA) and repetitive sequence-based PCR (REP-PCR) analysis. The metabolic activities of interest were analyzed both in relation to the single bacterial strains and to the combination of the latter as a multibacterial species system. After 6 days of incubation in mineral medium with diesel oil as sole carbon source, the Stenotrophomonas sp. M1 strain depleted 43-46 % of Cn-alkane from C28 up to C30, 70 % of the nC18 fatty acid methyl ester and the 46 % of the unresolved complex mixture of organic compounds. On the other hand, the Pseudomonas sp. NM1 strain depleted the 76 % of the nC18 fatty acid methyl ester, the 50 % of the unresolved complex mixture of organic compounds. The bacterial multispecies system was able to completely deplete Cn-alkane from C28 up to C30 and to deplete the 95 % of the unresolved complex mixture of organic compounds. The isolates, either as single strains and as a bacterial multispecies system, were proposed as candidates for bioaugmentation in bio-based processes for the decontamination of dredged sediments.

Storm-induced transfer of particulate trace metals to the deep-sea in the Gulf of Lion (NW Mediterranean Sea).

PubMed

Dumas, C; Aubert, D; Durrieu de Madron, X; Ludwig, W; Heussner, S; Delsaut, N; Menniti, C; Sotin, C; Buscail, R

2014-10-01

In order to calculate budgets of particulate matter and sediment-bound contaminants leaving the continental shelf of the Gulf of Lion (GoL), settling particles were collected in March 2011 during a major storm, using sediment traps. The collecting devices were deployed in the Cap de Creus submarine canyon, which represents the main export route. Particulate matter samples were analyzed to obtain mass fluxes and contents in organic carbon, Al, Cr, Co, Ni, Cu, Zn, Cd, Pb and La, Nd and Sm. The natural or anthropogenic origin of trace metals was assessed using enrichment factors (EFs). Results are that Zn, Cu and Pb appeared to be of anthropogenic origin, whereas Ni, Co and Cr appeared to be strictly natural. The anthropogenic contribution of all elements (except Cd) was refined by acid-leaching (HCl 1 N) techniques, confirming that Zn, Cu and Pb are the elements that are the most enriched. However, although those elements are highly labile (59-77%), they do not reflect severe enrichment (EFs <4). Most particles originate from the Rhone River. This has been confirmed by two different tracing procedures using rare earth elements ratios and concentrations of acid-leaching residual trace metals. Our results hence indicate that even in this western extremity of the GoL, storm events mainly export Rhone-derived particles via the Cap de Creus submarine canyons to the deep-sea environments. This export of material is significant as it represents about a third of the annual PTM input from the Rhone River.

Assessment of elemental concentrations in streams of the New Lead Belt in southeastern Missouri, 2002-05

USGS Publications Warehouse

Brumbaugh, William G.; May, Thomas W.; Besser, John M.; Allert, Ann L.; Schmitt, Christopher J.

2007-01-01

Concerns about possible effects of lead-mining activities on the water quality of federally protected streams located in southeastern Missouri prompted a suite of multidisciplinary studies to be conducted by the U.S. Geological Survey. As part of this investigation, a series of biological studies were initiated in 2001 for streams in the current mining region and the prospecting area. In this report, results are examined for trace elements and other selected chemical measurements in sediment, surface water, and sediment interstitial (pore) water sampled between 2002 and 2005 in association with these biological studies. Compared to reference sites, fine sediments collected downstream from mining areas were enriched in metals by factors as large as 75 for cadmium, 62 for cobalt, 171 for nickel, 95 for lead, and 150 for zinc. Greatest metal concentrations in sediments collected in 2002 were from sites downstream from mines on Strother Creek, Courtois Creek, and the West Fork Black River. Sediments from sites on Bee Fork, Logan Creek, and Sweetwater Creek also were noticeably enriched in lead. Sediments in Clearwater Lake, at least 75 kilometers downstream from mining activity, had metal concentrations that were 1.5 to 2.1 times greater than sediments in an area of the lake with no upstream mining activity. Longitudinal sampling along three streams in 2004 indicated that sediment metal concentrations decreased considerably a few kilometers downstream from mining activities; however, in Strother Creek some metals were still enriched by a factor of five or more as far as 13 kilometers downstream from the Buick tailings impoundment. Compared with 2002 samples, metals concentrations were dramatically lower in sediments collected in 2004 at an upper West Fork Black River site, presumably because beneficiation operations at the West Fork mill ceased in 2000. Concentrations of metals and sulfate in sediment interstitial (pore) waters generally tracked closely with metal concentrations in sediments. Metals, including cobalt, nickel, lead, and zinc, were elevated substantially in laboratory-produced pore waters of fine sediments collected near mining operations in 2002 and 2004. Passive diffusion samplers (peepers) buried 4 to 6 centimeters deep in riffle-run stream sediments during 2003 and 2005 had much lower pore-water metal concentrations than the laboratory-produced pore waters of fine sediments collected in 2002 and 2004, but each sampling method produced similar patterns among sites. The combined mean concentration of lead in peeper samples from selected sites located downstream from mining activities for six streams was about 10-fold greater than the mean of the reference sites. In most instances, metals concentrations in surface water and peeper water were not greatly different, indicating considerable exchange between the surface water and pore water at the depths and locations where peepers were situated. Passive sampling probes used to assess metal lability in pore waters of selected samples during 2004 sediment toxicity tests indicated that most of the filterable lead in the laboratory-prepared pore water was relatively non-labile, presumably because lead was complexed by organic matter, or was present as colloidal species. In contrast, large percentages of cobalt and nickel in pore water appeared to be labile. Passive integrative samplers deployed in surface water for up to 3 weeks at three sites in July 2005 confirmed the presence of elevated concentrations of labile metals downstream from mining operations on Strother Creek and, to a lesser extent, Bee Fork. These samplers also indicated a considerable increase in metal loadings occurred for a few days at the Strother Creek site, which coincided with moderate increases in stream discharges in the area.

Mercury enrichment indicates volcanic triggering of Valanginian environmental change

NASA Astrophysics Data System (ADS)

Charbonnier, Guillaume; Morales, Chloé; Duchamp-Alphonse, Stéphanie; Westermann, Stéphane; Adatte, Thierry; Föllmi, Karl B.

2017-01-01

The Valanginian stage (Early Cretaceous) includes an episode of significant environmental changes, which are well defined by a positive δ13C excursion. This globally recorded excursion indicates important perturbations in the carbon cycle, which has tentatively been associated with a pulse in volcanic activity and the formation of the Paraná-Etendeka large igneous province (LIP). Uncertainties in existing age models preclude, however, its positive identification as a trigger of Valanginian environmental changes. Here we report that in Valanginian sediments recovered from a drill core in Wąwał (Polish Basin, Poland), and from outcrops in the Breggia Gorge (Lombardian Basin, southern Switzerland), and Orpierre and Angles (Vocontian Basin, SE France), intervals at or near the onset of the positive δ13C excursion are significantly enriched in mercury (Hg). The persistence of the Hg anomaly in Hg/TOC, Hg/phyllosilicate, and Hg/Fe ratios shows that organic-matter scavenging and/or adsorbtion onto clay minerals or hydrous iron oxides only played a limited role. Volcanic outgassing was most probably the primary source of the Hg enrichments, which demonstrate that an important magmatic pulse triggered the Valanginian environmental perturbations.

The effect of sewage pollution on the feeding behaviour and diet of Hediste (Nereis diversicolor (O.F. Müller, 1776)) in three estuaries in south-east England, with implications for saltmarsh erosion.

PubMed

Aberson, M J R; Bolam, S G; Hughes, R G

2016-04-15

Stable isotope analyses of the abundant infaunal polychaete Hediste diversicolor, recognised as an indicator of sewage pollution, support the hypothesis that nutrient enrichment promotes surface deposit feeding, over suspension feeding and predation. At sewage-polluted sites in three estuaries in SE England Hediste mainly consumed microphytobenthos, sediment organic matter and filamentous macroalgae Ulva spp. At cleaner sites Hediste relied more on suspension feeding and consumption of Spartina anglica. There were no consistent differences in Hediste densities between the polluted and cleaner sites, probably because of increased densities at the cleaner sites too, facilitated by the planting of Spartina and nitrogen enrichment there too, including from agricultural run-off. Increased nutrient enrichment and the artificial availability of Spartina have probably increased densities of, and deposit-feeding by, Hediste in the past half-century and contributed indirectly to saltmarsh losses, since deposit-feeding by Hediste has been implicated in recent saltmarsh erosion in SE England. Copyright © 2016 Elsevier Ltd. All rights reserved.

The Assessment of Mangrove Sediment Quality in Mengkabong Lagoon: An Index Analysis Approach

ERIC Educational Resources Information Center

Praveena, Sarva M.; Radojevic, Miroslav; Abdullah, Mohd H.

2007-01-01

The objectives of this study are to use different types of indexes to assess the current pollution status in Mengkabong lagoon and select the best index to describe the Mengkabong sediment quality. The indexes used in this study were Enrichment Factor (EF), Geo-accumulation Index (Igeo), Pollution Load Index (PLI) and Marine Sediment Pollution…

Isotopic compositions and probable origins of organic molecules in the Eocene Messel shale

NASA Technical Reports Server (NTRS)

Hayes, J. M.; Takigiku, Ray; Ocampo, Ruben; Callot, Enry J.; Albrecht, Pierre

1987-01-01

It is shown here that the carbon isotopic compositions of biomarkers from the Eocene Messel shale, accumulated 47 + or - 2 million years ago in anaerobic waters at the bottom of a lake, allow identification of specific sources for some materials and reconstruction of carbon flows within the lake and its sediments. The C-13 content of organic matter synthesized by lacustrine primary producers can be estimated from the observed C-13 content of the geoporphyrins derived from their chlorophylls. Total organic material in the shale is depleted in C-13 by six parts per thousand relative to that input. This difference cannot be explained by selective loss of components enriched in C-13, nor, as shown by isotopic compositions of other biomarkers, by inputs from land plants surrounding the lake or from methanogenic bacteria.

Intense molybdenum accumulation in sediments underneath a nitrogenous water column and implications for the reconstruction of paleo-redox conditions based on molybdenum isotopes

NASA Astrophysics Data System (ADS)

Scholz, Florian; Siebert, Christopher; Dale, Andrew W.; Frank, Martin

2017-09-01

The concentration and isotope composition of molybdenum (Mo) in sediments and sedimentary rocks are widely used proxies for anoxic conditions in the water column of paleo-marine systems. While the mechanisms leading to Mo fixation in modern restricted basins with anoxic and sulfidic (euxinic) conditions are reasonably well constrained, few studies have focused on Mo cycling in the context of open-marine anoxia. Here we present Mo data for water column particulate matter, modern surface sediments and a paleo-record covering the last 140,000 years from the Peruvian continental margin. Mo concentrations in late Holocene and Eemian (penultimate interglacial) shelf sediments off Peru range from ∼70 to 100 μg g-1, an extent of Mo enrichment that is thought to be indicative of (and limited to) euxinic systems. To investigate if this putative anomaly could be related to the occasional occurrence of sulfidic conditions in the water column overlying the Peruvian shelf, we compared trace metal (Mo, vanadium, uranium) enrichments in particulate matter from oxic, nitrate-reducing (nitrogenous) and sulfidic water masses. Coincident enrichments of iron (Fe) (oxyhydr)oxides and Mo in the nitrogenous water column as well as co-variation of dissolved Fe and Mo in the sediment pore water suggest that Mo is delivered to the sediment surface by Fe (oxyhydr)oxides. Most of these precipitate in the anoxic-nitrogenous water column due to oxidation of sediment-derived dissolved Fe with nitrate as a terminal electron acceptor. Upon reductive dissolution in the surface sediment, a fraction of the Fe and Mo is re-precipitated through interaction with pore water sulfide. The Fe- and nitrate-dependent mechanism of Mo accumulation proposed here is supported by the sedimentary Mo isotope composition, which is consistent with Mo adsorption onto Fe (oxyhydr)oxides. Trace metal co-variation patterns as well as Mo and nitrogen isotope systematics suggest that the same mechanism of Mo delivery caused the 'anomalously' high interglacial Mo accumulation rates in the paleo-record. Our findings suggest that Fe- and nitrate-dependent Mo shuttling under nitrogenous conditions needs to be considered a possible reason for sedimentary Mo enrichments during past periods of widespread anoxia in the open ocean.

Geochemical controls on vanadium accumulation in fossil fuels

USGS Publications Warehouse

Breit, G.N.; Wanty, R.B.

1989-01-01

High vanadium contents in petroleum and other fossil fuels have been attributed to organic-matter type, organisms, volcanic emanations, diffusion of sea water, and epigenetic enrichment. However, these factors are inadequate to account for the high abundance of vanadium in some fossil fuels and the paucity in others. By examining vanadium deposits in sedimentary rocks with sparse organic matter, constraints are placed on processes controlling vanadium accumulation in organic-rich sediments. Vanadium, as vanadate (V(V)), entered some depositional basins in oxidizing waters from dry, subaerial environments. Upon contact with organic matter in anoxic waters, V(V) is reduced to vanadyl (V(IV)), which can be removed from the water column by adsorption. H2S reduces V(IV) to V(III), which hydrolyzes and precipitates. The lack of V(III) in petroleum suggests that reduction of V(IV) to V(III) is inhibited by organic complexes. In the absence of strong complexing agents, V(III) forms and is incorporated in clay minerals.

Geochemical controls of vanadium accumulation in fossil fuels

USGS Publications Warehouse

Breit, G.N.; Wanty, R.B.

1989-01-01

High vanadium contents in petroleum and other fossil fuels have been attributed to organic-matter type, organisms, volcanic emanations, diffusion of sea water, and epigenetic enrichment. However, these factors are inadequate to account for the high abundance of vanadium in some fossil fuels and the paucity in others. By examining vanadium deposits in sedimentary rocks with sparse organic matter, constraints are placed on processes controlling vanadium accumulation in organic-rich sediments. Vanadium, as vanadate (V(V)), entered some depositional basins in oxidizing waters from dry, subaerial environments. Upon contact with organic matter in anoxic waters, V(V) is reduced to vanadyl (V(IV)), which can be removed from the water column by adsorption. H2S reduces V(IV) to V(III), which hydrolyzes and precipitates. The lack of V(III) in petroleum suggests that reduction of V(IV) to V(III) is inhibited by organic complexes. In the absence of strong complexing agents, V(III) forms and is incorporated in clay minerals.

Anaerobic Methane Oxidation Driven by Microbial Reduction of Natural Organic Matter in a Tropical Wetland

PubMed Central

Valenzuela, Edgardo I.; Prieto-Davó, Alejandra; López-Lozano, Nguyen E.; Hernández-Eligio, Alberto; Vega-Alvarado, Leticia; Juárez, Katy; García-González, Ana Sarahí; López, Mercedes G.

2017-01-01

ABSTRACT Wetlands constitute the main natural source of methane on Earth due to their high content of natural organic matter (NOM), but key drivers, such as electron acceptors, supporting methanotrophic activities in these habitats are poorly understood. We performed anoxic incubations using freshly collected sediment, along with water samples harvested from a tropical wetland, amended with 13C-methane (0.67 atm) to test the capacity of its microbial community to perform anaerobic oxidation of methane (AOM) linked to the reduction of the humic fraction of its NOM. Collected evidence demonstrates that electron-accepting functional groups (e.g., quinones) present in NOM fueled AOM by serving as a terminal electron acceptor. Indeed, while sulfate reduction was the predominant process, accounting for up to 42.5% of the AOM activities, the microbial reduction of NOM concomitantly occurred. Furthermore, enrichment of wetland sediment with external NOM provided a complementary electron-accepting capacity, of which reduction accounted for ∼100 nmol 13CH4 oxidized · cm−3 · day−1. Spectroscopic evidence showed that quinone moieties were heterogeneously distributed in the wetland sediment, and their reduction occurred during the course of AOM. Moreover, an enrichment derived from wetland sediments performing AOM linked to NOM reduction stoichiometrically oxidized methane coupled to the reduction of the humic analogue anthraquinone-2,6-disulfonate. Microbial populations potentially involved in AOM coupled to microbial reduction of NOM were dominated by divergent biota from putative AOM-associated archaea. We estimate that this microbial process potentially contributes to the suppression of up to 114 teragrams (Tg) of CH4 · year−1 in coastal wetlands and more than 1,300 Tg · year−1, considering the global wetland area. IMPORTANCE The identification of key processes governing methane emissions from natural systems is of major importance considering the global warming effects triggered by this greenhouse gas. Anaerobic oxidation of methane (AOM) coupled to the microbial reduction of distinct electron acceptors plays a pivotal role in mitigating methane emissions from ecosystems. Given their high organic content, wetlands constitute the largest natural source of atmospheric methane. Nevertheless, processes controlling methane emissions in these environments are poorly understood. Here, we provide tracer analysis with 13CH4 and spectroscopic evidence revealing that AOM linked to the microbial reduction of redox functional groups in natural organic matter (NOM) prevails in a tropical wetland. We suggest that microbial reduction of NOM may largely contribute to the suppression of methane emissions from tropical wetlands. This is a novel avenue within the carbon cycle in which slowly decaying NOM (e.g., humic fraction) in organotrophic environments fuels AOM by serving as a terminal electron acceptor. PMID:28341676

Anaerobic Methane Oxidation Driven by Microbial Reduction of Natural Organic Matter in a Tropical Wetland.

PubMed

Valenzuela, Edgardo I; Prieto-Davó, Alejandra; López-Lozano, Nguyen E; Hernández-Eligio, Alberto; Vega-Alvarado, Leticia; Juárez, Katy; García-González, Ana Sarahí; López, Mercedes G; Cervantes, Francisco J

2017-06-01

Wetlands constitute the main natural source of methane on Earth due to their high content of natural organic matter (NOM), but key drivers, such as electron acceptors, supporting methanotrophic activities in these habitats are poorly understood. We performed anoxic incubations using freshly collected sediment, along with water samples harvested from a tropical wetland, amended with 13 C-methane (0.67 atm) to test the capacity of its microbial community to perform anaerobic oxidation of methane (AOM) linked to the reduction of the humic fraction of its NOM. Collected evidence demonstrates that electron-accepting functional groups (e.g., quinones) present in NOM fueled AOM by serving as a terminal electron acceptor. Indeed, while sulfate reduction was the predominant process, accounting for up to 42.5% of the AOM activities, the microbial reduction of NOM concomitantly occurred. Furthermore, enrichment of wetland sediment with external NOM provided a complementary electron-accepting capacity, of which reduction accounted for ∼100 nmol 13 CH 4 oxidized · cm -3 · day -1 Spectroscopic evidence showed that quinone moieties were heterogeneously distributed in the wetland sediment, and their reduction occurred during the course of AOM. Moreover, an enrichment derived from wetland sediments performing AOM linked to NOM reduction stoichiometrically oxidized methane coupled to the reduction of the humic analogue anthraquinone-2,6-disulfonate. Microbial populations potentially involved in AOM coupled to microbial reduction of NOM were dominated by divergent biota from putative AOM-associated archaea. We estimate that this microbial process potentially contributes to the suppression of up to 114 teragrams (Tg) of CH 4 · year -1 in coastal wetlands and more than 1,300 Tg · year -1 , considering the global wetland area. IMPORTANCE The identification of key processes governing methane emissions from natural systems is of major importance considering the global warming effects triggered by this greenhouse gas. Anaerobic oxidation of methane (AOM) coupled to the microbial reduction of distinct electron acceptors plays a pivotal role in mitigating methane emissions from ecosystems. Given their high organic content, wetlands constitute the largest natural source of atmospheric methane. Nevertheless, processes controlling methane emissions in these environments are poorly understood. Here, we provide tracer analysis with 13 CH 4 and spectroscopic evidence revealing that AOM linked to the microbial reduction of redox functional groups in natural organic matter (NOM) prevails in a tropical wetland. We suggest that microbial reduction of NOM may largely contribute to the suppression of methane emissions from tropical wetlands. This is a novel avenue within the carbon cycle in which slowly decaying NOM (e.g., humic fraction) in organotrophic environments fuels AOM by serving as a terminal electron acceptor. Copyright © 2017 American Society for Microbiology.

Biogeochemistry of Mariana Islands coastal sediments: terrestrial influence on /gd13, Ash, CaCO3, Al, Fe, Si and P

NASA Astrophysics Data System (ADS)

Matson, Ernest A.

1989-01-01

Stable C isotope ratios (δ13C-PDB), percentages of organic matter, and HCl insoluble ash and soluble carbonates, extractable Fe, Al, Si and P were used to determine the distribution and accumulation of terrestrial material in reef-flat moats and lagoons of two high islands (Guam and Saipan) in the western tropical Pacific. Carbonate sediments of a reef-flat moat infiltrated by seepage of aquifer waters (but without surface runoff) were depleted in both P (by 38%) and 13C (by 41%) and enriched in Si (by 100%) relative to offshore lagoon sediments. Iron and ash accumulated in depositional regimes regardless of the occurrence of runoff but was depleted from coarse-grained carbonates in turbulent regimes. Aluminum (>ca. 10 to 20 μmol g-1), Fe (>ca. 1 to 3 μmol g-1) and ash (>0.5%) indicated terrigenous influence which was corroborated by depletions in both 13C and P. Low-salinity geochemical segregation, natural biochemical accumulation, as well as long-shore currents and eddies help sequester these materials nearshore.

Growth of sedimentary Bathyarchaeota on lignin as an energy source.

PubMed

Yu, Tiantian; Wu, Weichao; Liang, Wenyue; Lever, Mark Alexander; Hinrichs, Kai-Uwe; Wang, Fengping

2018-06-05

Members of the archaeal phylum Bathyarchaeota are among the most abundant microorganisms on Earth. Although versatile metabolic capabilities such as acetogenesis, methanogenesis, and fermentation have been suggested for bathyarchaeotal members, no direct confirmation of these metabolic functions has been achieved through growth of Bathyarchaeota in the laboratory. Here we demonstrate, on the basis of gene-copy numbers and probing of archaeal lipids, the growth of Bathyarchaeota subgroup Bathy-8 in enrichments of estuarine sediments with the biopolymer lignin. Other organic substrates (casein, oleic acid, cellulose, and phenol) did not significantly stimulate growth of Bathyarchaeota Meanwhile, putative bathyarchaeotal tetraether lipids incorporated 13 C from 13 C-bicarbonate only when added in concert with lignin. Our results are consistent with organoautotrophic growth of a bathyarchaeotal group with lignin as an energy source and bicarbonate as a carbon source and shed light into the cycling of one of Earth's most abundant biopolymers in anoxic marine sediment.

Warming increases nutrient mobilization and gaseous nitrogen removal from sediments across cascade reservoirs.

PubMed

Zhou, Xingpeng; Chen, Nengwang; Yan, Zhihao; Duan, Shuiwang

2016-12-01

Increases in water temperature, as a result of climate change, may influence biogeochemical cycles, sediment-water fluxes and consequently environmental sustainability. Effects of rising temperature on dynamics of nitrate, nitrite, ammonium, dissolved inorganic nitrogen (DIN), dissolved reactive phosphorus (DRP), dissolved organic carbon (DOC) and gaseous nitrogen (N 2 and N 2 O) were examined in a subtropical river (the Jiulong River, southeast China) by microcosm experiments. Slurry sediments and overlying water were collected from three continuous cascade reservoirs, and laboratory incubations were performed at four temperature gradients (5 °C, 15 °C, 25 °C and 35 °C). Results indicated: (1) warming considerably increased sediment ammonium, DIN and DOC fluxes to overlying water; (2) warming increased retention of nitrate, and to a lesser extent, nitrite, corresponding to increases in N 2 and N 2 O emission; (3) DRP was retained but released from Fe/Al-P enriched sediments at high temperature (35 °C) due to enhanced coupled transformation of carbon and nitrogen with oxygen deficiency. Using relationships between sediment fluxes and temperature, a projected 2.3°C-warming in future would increase ammonium flux from sediment by 7.0%-16.8%, while increasing nitrate flux into sediment by 8.9%-28.6%. Moreover, substrates (e.g., grain size, carbon availability) influenced nutrient delivery and cycling across cascade reservoirs. This study highlights that warming would increase bioreactive nutrient (i.e., ammonium and phosphate) mobilization with limited gaseous N removal from sediments, consequently deteriorating water quality and increasing eutrophication with future climate change. Copyright © 2016 Elsevier Ltd. All rights reserved.

Spatial distribution, enrichment, and source of environmentally important elements in Batticaloa lagoon, Sri Lanka.

PubMed

Adikaram, Madurya; Pitawala, Amarasooriya; Ishiga, Hiroaki; Jayawardana, Daham

2017-01-01

The present paper is the first documentation of distribution and contamination status of environmentally important elements of superficial sediments in the Batticaloa lagoon that is connected to the largest bay of the world. Surface sediment samples were collected from 34 sites covering all over the lagoon. Concentrations of elements such as As, Cr, Cu, Fe, Nb, Ni, Pb, Sc, Sr, Th, V, Y, Zn, and Zr were measured by X-ray florescence analysis. Geochemically, the lagoon has three different zones that were influenced mainly by fresh water sources, marine fronts, and intermediate mixing zones. The marine sediment quality standards indicate that Zr and Th values are exceeded throughout the lagoon. According to the freshwater sediment quality standards, Cr levels of all sampling sites exceed the threshold effect level (TEL) and 17 % of them are even above the probable effect level (PEL). Most sampling sites of the channel discharging areas show minor enrichment of Cu, Ni, and Zn with respect to the TEL. Contamination indices show that the lagoon mouth area is enriched with As. Statistical analysis implies that discharges from agricultural channel and marine fluxes of the lagoon effects on the spatial distribution of measured elements. Further research is required to understand the rate of contamination in the studied marine system.

Microtubule distribution in gravitropic protonemata of the moss Ceratodon

NASA Technical Reports Server (NTRS)

Schwuchow, J.; Sack, F. D.; Hartmann, E.

1990-01-01

Tip cells of dark-grown protonemata of the moss Ceratodon purpureus are negatively gravitropic (grow upward). They possess a unique longitudinal zonation: (1) a tip group of amylochloroplasts in the apical dome, (2) a plastid-free zone, (3) a zone of significant plastid sedimentation, and (4) a zone of mostly non-sedimenting plastids. Immunofluorescence of vertical cells showed microtubules distributed throughout the cytoplasm in a mostly axial orientation extending through all zones. Optical sectioning revealed a close spatial association between microtubules and plastids. A majority (two thirds) of protonemata gravistimulated for > 20 min had a higher density of microtubules near the lower flank compared to the upper flank in the plastid-free zone. This apparent enrichment of microtubules occurred just proximal to sedimented plastids and near the part of the tip that presumably elongates more to produce curvature. Fewer than 5% of gravistimulated protonemata had an enrichment in microtubules near the upper flank, whereas 14% of vertical protonemata were enriched near one of the side walls. Oryzalin and amiprophos-methyl (APM) disrupted microtubules, gravitropism, and normal tip growth and zonation, but did not prevent plastid sedimentation. We hypothesize that a microtubule redistribution plays a role in gravitropism in this protonema. This appears to be the first report of an effect of gravity on microtubule distribution in plants.

Provenance, Source Rock Characteristics And Paleoweathering Conditions Of The Nearshore Continental Sediments Off Pondicherry, South East Coast Of India

NASA Astrophysics Data System (ADS)

Natarajan, T.; Seshachalam, S.; Ponniah, J.; Varadhan, R.; M, S.

2008-05-01

Geochemical studies, comprising major elements and trace elements, including the Rare Earth Elements (REE), have been carried out on the modern sediments of inner continental shelf representing nearshore marine environments. Concentrations were normalized with Chondrite and PAAS show LREE enriched and flat HREE patterns with slight positive Eu anomaly which is due to the influence of feldspar rich source materials. The LREE enriched and flat HREE patterns with positive Eu anomaly have been considered as the typical character of post- Archaean Sediments. The La/Th ratio ranges from 1.66 to 8.84 with an average value of 4.09, which indicates a heterogenitic source for the sediments of the study area. The La-Th-Sc ternary plot suggests all the samples fall close to the field dominated by tonalite to granite and away from the basalt and komatiite compositions and appear to be derived from sources enriched in felsic components. The transition metal ratios such as Cr/V, Ni/CO and V/Ni indicate both Archaean and Post-Archaean nature to the sediments indicating that the sediments have been derived from heterogenitic sources. The ternary diagram plot of Th-Hf-Co and La-Th-Sc falls in the field of upper continental crust of post Archaean age. This clearly indicates the terrestrial source for the sediments from the nearby landmass. The data are slightly offset from the upper crustal composition away from the Hf apex. This is probably a result of Zircon concentration. Geochemical data have also helped in ascertaining the weathering trends. The Chemical Index of Alteration (CIA) has been used to quantify the degree of weathering. The calculated CIA values for sediments demonstrate both low CIA values of less than 50 percent (low silicate weathering) and intermediate CIA values (60-70 percent) indicating that the sediments are possibly the product of sedimentary and metasedimentary rocks that have undergone intermediate chemical weathering. On an A—CN—K diagram, the data fall closer to the trend parallel to Al2O3 (CaO*+Na2O) join, suggesting that the sediments represent weathered products from granite and charnockite.

Effects of pollution on the geochemical properties of marine sediments across the fringing reef of Aqaba, Red Sea.

PubMed

Al-Rousan, Saber; Al-Taani, Ahmed A; Rashdan, Maen

2016-09-15

The Gulf of Aqaba is of significant strategic and economic value to all gulf-bordering states, particularly to Jordan, where it provides Jordan with its only marine outlet. The Gulf is subject to a variety of impacts posing imminent ecological risk to its unique marine ecosystem. We attempted to investigate the status of metal pollution in the coastal sediments of the Jordanian Gulf of Aqaba. The distribution of Cd, Cr, Zn, Cu, Pb, Al, Fe, and Mn concentrations were determined in trapped and bottom-surface sediments at three selected sites at different depths. In addition, monthly sedimentation rates at varying water depths were also estimated at each sampling site using sediment traps. The high concentrations of Cd, Cr, Zn were recorded at the Phosphate Loading Birth (PLB) site followed by the Industrial Complex (IC) site indicating their dominant anthropogenic source (i.e., the contribution of industrial activities). However, Fe, Al, and Mn contents were related to inputs from the terrigenous (crustal) origin. Except for Al, Fe and Mn at the PLB site, the concentrations of metals exhibited a decreasing trend with increasing water depth (distance from the shoreline). The PLB site also showed the highest sedimentation rate which decreased with increasing water depth. The Enrichment factors (EFs) showed that Cd was the most enriched element in the sediment (indicating that Cd pollution is widespread), whereas the least enriched metal in sediments was Cu. EF values suggested that the coastal area is impacted by a combination of human and natural sources of metals, where the anthropogenic sources are intense in the PLB site (north of Gulf of Aqaba). The MSS area is potentially the least polluted, consistent with being a marine reserve. The IC sediments have been found to be impacted by human activities but less intensely compared to the PLB area. These results suggested that there are two sources of metals in sediments; the primary source is likely closer to PLB, while the secondary is nearby the IC. Copyright © 2016 Elsevier Ltd. All rights reserved.

Temporal fluctuations in grain size, organic materials and iron concentrations in intertidal surface sediment of San Francisco Bay

USGS Publications Warehouse

Thomson-Becker, E. A.; Luoma, S.N.

1985-01-01

The physical and chemical characteristics of the oxidized surface sediment in an estuary fluctuate temporally in response to physical forces and apparently-fluctuating inputs. These characteristics, which include grain size and concentrations of organic materials and iron, will influence both trace-metal geochemistry and bioavailability. Temporal trends in the abundance of fine particles, total organic carbon content (TOC), absorbance of extractable organic material (EOM), and concentration of extractable iron in the sediment of San Francisco Bay were assessed using data sets containing approximately monthly samples for periods of two to seven years. Changes in wind velocity and runoff result in monthly changes in the abundance of fine particles in the intertidal zone. Fine-grained particles are most abundant in the late fall/early winter when runoff is elevated and wind velocities are low; particles are coarser in the summer when runoff is low and wind velocities are consistently high. Throughout the bay, TOC is linearly related to fine particle abundance (r = 0.61). Temporal variability occurs in this relationship, as particles are poor in TOC relative to percent of fine particles in the early rainy season. Iron-poor particles also appear to enter the estuary during high runoff periods; while iron is enriched on particle surfaces in the summer. Concentrations of extractable iron and absorbance of EOM vary strongly from year to year. Highest absorbances of EOM occurred in the first year following the drought in 1976-77, and in 1982 and 1983 when river discharge was unusually high. Extractable-iron concentrations were also highest in 1976-77, but were very low in 1982 and 1983. ?? 1985 Dr W. Junk Publishers.

Enrichment of sulfate reducing anaerobic methane oxidizing community dominated by ANME-1 from Ginsburg Mud Volcano (Gulf of Cadiz) sediment in a biotrickling filter.

PubMed

Bhattarai, Susma; Cassarini, Chiara; Rene, Eldon R; Zhang, Yu; Esposito, Giovanni; Lens, Piet N L

2018-07-01

This study was performed to enrich anaerobic methane-oxidizing archaea (ANME) present in sediment from the Ginsburg Mud Volcano (Gulf of Cadiz) in a polyurethane foam packed biotrickling filter (BTF). The BTF was operated at 20 (±2) °C, ambient pressure with continuous supply of methane for 248 days. Sulfate reduction with simultaneous sulfide production (accumulating ∼7 mM) after 200 days of BTF operation evidenced anaerobic oxidation of methane (AOM) coupled to sulfate reduction. High-throughput sequence analysis of 16S rRNA genes showed that after 248 days of BTF operation, the ANME clades enriched to more than 50% of the archaeal sequences, including ANME-1b (40.3%) and ANME-2 (10.0%). Enrichment of the AOM community was beneficial to Desulfobacteraceae, which increased from 0.2% to 1.8%. Both the inoculum and the BTF enrichment contained large populations of anaerobic sulfur oxidizing bacteria, suggesting extensive sulfur cycling in the BTF. Copyright © 2018 Elsevier Ltd. All rights reserved.

Interrill Erodibility of P and C on conventially and organically farmed Devon soils

NASA Astrophysics Data System (ADS)

Kuhn, N. J.

2012-04-01

Soil erosion can have significant off-site effects on water quality and thus human and habitat health. Apart from sedimentation, the transfer of nutrients, both dissolved and particulate, is a major concern. The particulate transfer of nutrients from agricultural land can occur either by rill or interrill erosion. Rill erosion is non-selective and affects only a limited extent of agricultural land. Interrill processes such as crusting, splash and raindrop-impacted wash, on the other hand, act on all cropland and affect the quality of the water from all areas generating runoff. A significant amount of phosphorus (P) is contained in the surface soil layer transformed by interrill processes annually. In the EU, the P content of a crusted (2 mm) surface layer corresponds to 4 to 40 kg ha-1 of P on arable land (1.094 mil km2). Therefore, the role of interrill processes and erosion for regional nutrient cycling requires close attention. Interrill erosion is a complex phenomenon, involving the detachment, transport and deposition of soil particles by raindrop impacted flow. Resistance to interrill erosion varies between soils depending on their physical, chemical and mineralogical properties. In addition, significant changes in soil resistance to interrill erosion occur during storms as a result of changes in surface roughness, cohesion and particle size. As a consequence, erosion on interrill areas is selective, moving the most easily detached small and/or light soil particles which are often enriched in clay, P and organic C. Commonly, the risk of erosion associated with organically farmed soils is lower than those farmed in a conventional way. This is attributed to greater aggregate stability and thus greater infiltration and lower erodibility. Erosion of nutrients on organically farmed soils is therefore considered to be reduced by the same order of magnitude than the amount of eroded soil compared to conventionally farmed soils. However, the selective nature of interrill erosion potentially counteracts this effect by the preferential removal of fine particles enriched in nutrients and soil organic matter. In this study, an experiment comparing the erodibility of P and C on organically and conventially farmed soils from Devon is presented. The results show a disproportional increase of P in sediment from the organically farmed soil, reducing the perceived benefit of organic farming on nutrient erosion by 80%. The pronounced P enrichment in the organically farmed soil is attributed to the higher concentrations of C and P as well as lower densities of the small particle fraction. The results, while very preliminary, indicate that the impact of soil management on off-site effects of erosion such as water quality can only be fully assessed when we understand the relevant erosion processes. They also indicate that some less than expected positive effects of changing soil management to improve water quality might be caused by the preferential erosion of P-bearing soil particles.

Heavy metal distribution in sediment profiles of Tuul River, Mongolia

NASA Astrophysics Data System (ADS)

Soyol-Erdene, T. O.; Lin, S.; Tuuguu, E.; Daichaa, D.; Ulziibat, B.; Enkh-Amgalan, T.; Hsieh, I. C.

2016-12-01

The distribution, enrichment, and accumulation of heavy metals in the sediments of Tuul River, Mongolia were investigated. Sediment core samples with depths of 4.0-49 cm from thirteen locations along the Tuul River were collected in the period from Sept. 2013 to Aug. 2014 and characterized for metal contents (e.g., Al, Fe, Cu, Zn, Pb, Ni, Cd, Hg and Cr), water content, and grain size. Results showed that metal average concentrations in the sample cores varied from 0.02 mg kg-1 for Hg (0.01 - 0.03 mg kg-1) to 481 mg kg-1 for Mn (277 - 623 mg kg-1). Metal concentrations at the downstream of the capital city were higher than those at other locations. All heavy metals studied, had average enrichment factors less than 3.0, but some sites had relatively higher values of enrichment factors up to 18 for Cu, 4.1 for Hg, 5.9 for Zn, and 25 for Cr, especially at middle depth ( 8-12 cm) of the cores. Importantly, severe pollution of mercury (Hg) was found at the downstream of the capital city which requires immediate remediation before this metal propagates into the food chain. Metal concentrations correlated to the physical-chemical properties of the sediments, which suggested the influence of industrial and municipal wastewaters discharged from the nearby cities. Results of this work would help to develop strategy to remediate of Tuul river sediment and to reduce the exposure of inhabitants to toxic substances.

Quality of Tourist Beaches in Huatulco, SW of Mexico: Multiproxy Studies

NASA Astrophysics Data System (ADS)

Retama, I.; Jonathan, M. P.; Rodriguez-Espinosa, P. F.

2014-12-01

40 beach water and sediment samples were collected from the inter-tidal zones of tourist beaches of Huatulco in the State of Oaxaca, South Western part of Mexico. The samples were collected in an aim to know the concentration pattern of metals (Cu, Cd, Cr, Ni, Pb, Zn, Co, Mn, Fe, As, Hg) in sediments and microplastics. Physico-chemical parameters like temperature, pH, dissolved oxygen, conductivity and total dissolved solids, salinity and redox potential. Collection of samples was done during the peak season in April 2013. Our results from water samples indicate that the physico-chemical conditions of the beach water have been altered due to human activities in large numbers. The bioavailable metal concentrations indicate that enrichment of Pb, Cd, Cr and As and it is also supported by the higher values observed from the calculation of enrichment factor and geoaccumulation index. The higher values in the sediments is either due to natural sources like chemical weathering of rocks and external sources, which points to high tourism, agricultural activities in the region. Identification of micro-plastics was done through SEM photographs, indicating the type of plastic wastes deposited into the beach regions which can indicate the density, durability and the persistence level in the sediments. Eventhough the enrichment of metals and modification of beach water quality is observed, care need to be taken to avoid further damage to the coastal ecosystem. Keywords: Tourism, Beach sediments, Beach water, Micro plastics, Trace metals, Contamination indices, Huatulco, Mexico.

The Effect of Mangrove Leaf Litter Enrichment on Macrobenthic Colonization of Defaunated Sandy Substrates

NASA Astrophysics Data System (ADS)

Lee, S. Y.

1999-11-01

The importance of exported mangrove materials to nearshore macrobenthos has largely been predicted based upon decomposition and utilization studies conducted within the mangrove environment, and from quantitative measurements of export. The present study evaluated the impact of mangrove leaf litter enrichment on non-mangrove substrates in a high-salinity microcosm experiment. Fortnightly addition of Kandelia candel leaf detritus at levels equivalent to 0·66 and 0·33 mg cm -2day -1in defaunated sand in microcosms maintained under high salinity conditions and on a sandy substrate resulted in no significant differences from the control in total faunal dry biomass or ash-free dry weight (AFDW) after 28, 73, 137 and 217 days of experiment. Duration of experiment was significant in determining the biomass (both dry weight and AFDW) of the macrofaunal assemblage in the microcosms, but neither enrichment nor its interaction with time had an effect. Species richness, Shannon diversity and evenness, and the total number of individuals, however, decreased in the order control>low enrichment>high enrichment for almost all sampling dates. By contrast, soluble tannins in the microcosm sediment demonstrated the reverse pattern. Both duration of experiment and enrichment were significant in determining species richness and the total number of individuals. The interaction between time and enrichment level was significant in the former but not the latter case. Discriminant analysis performed on the species abundance data indicated distinct animal assemblages characteristic of the three enrichment levels. These findings suggest that mangrove organic matter may not necessarily result in enhancement effects on marine benthos but high concentrations of tannins may hamper colonization by the macrobenthos.

Methanogenic activity and diversity in the centre of the Amsterdam Mud Volcano, Eastern Mediterranean Sea.

PubMed

Lazar, Cassandre Sara; John Parkes, R; Cragg, Barry A; L'Haridon, Stephane; Toffin, Laurent

2012-07-01

Marine mud volcanoes are geological structures emitting large amounts of methane from their active centres. The Amsterdam mud volcano (AMV), located in the Anaximander Mountains south of Turkey, is characterized by intense active methane seepage produced in part by methanogens. To date, information about the diversity or the metabolic pathways used by the methanogens in active centres of marine mud volcanoes is limited. (14)C-radiotracer measurements showed that methylamines/methanol, H(2)/CO(2) and acetate were used for methanogenesis in the AMV. Methylotrophic methanogenesis was measured all along the sediment core, Methanosarcinales affiliated sequences were detected using archaeal 16S PCR-DGGE and mcrA gene libraries, and enrichments of methanogens showed the presence of Methanococcoides in the shallow sediment layers. Overall acetoclastic methanogenesis was higher than hydrogenotrophic methanogenesis, which is unusual for cold seep sediments. Interestingly, acetate porewater concentrations were extremely high in the AMV sediments. This might be the result of organic matter cracking in deeper hotter sediment layers. Methane was also produced from hexadecanes. For the most part, the methanogenic community diversity was in accordance with the depth distribution of the H(2)/CO(2) and acetate methanogenesis. These results demonstrate the importance of methanogenic communities in the centres of marine mud volcanoes. © 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Reductive dehalogenation activity of indigenous microorganism in sediments of the Hackensack River, New Jersey.

PubMed

Sohn, Seo Yean; Häggblom, Max M

2016-07-01

Organohalogen pollutants are of concern in many river and estuarine environments, such as the New York-New Jersey Harbor estuary and its tributaries. The Hackensack River is contaminated with various metals, hydrocarbons and halogenated organics, including polychlorinated biphenyls (PCBs) and polychlorinated dibenzo-p-dioxins. In order to examine the potential for microbial reductive dechlorination by indigenous microorganisms, sediment samples were collected from five different estuarine locations along the Hackensack River. Hexachlorobenzene (HCB), hexabromobenzene (HBB), and pentachloroaniline (PCA) were selected as model organohalogen pollutants to assess anaerobic dehalogenating potential. Dechlorinating activity of HCB and PCA was observed in sediment microcosms for all sampling sites. HCB was dechlorinated via pentachlorobenzene (PeCB) and trichlorobenzene (TriCB) to dichlorobenzene (DCB). PCA was dechlorinated via tetrachloroaniline (TeCA), trichloroanilines (TriCA), and dichloroanilines (DCA) to monochloroaniline (MCA). No HBB debromination was observed over 12 months of incubation. However, with HCB as a co-substrate slow HBB debromination was observed with production of tetrabromobenzene (TeBB) and tribromobenzene (TriBB). Chloroflexi specific 16S rRNA gene PCR-DGGE followed by sequence analysis detected Dehalococcoides species in sediments of the freshwater location, but not in the estuarine site. Analysis targeting 12 putative reductive dehalogenase (rdh) genes showed that these were enriched concomitant with HCB or PCA dechlorination in freshwater sediment microcosms. Copyright © 2016 Elsevier Ltd. All rights reserved.

Trends in historical mercury deposition inferred from lake sediment cores across a climate gradient in the Canadian High Arctic.

PubMed

Korosi, Jennifer B; Griffiths, Katherine; Smol, John P; Blais, Jules M

2018-06-02

Recent climate change may be enhancing mercury fluxes to Arctic lake sediments, confounding the use of sediment cores to reconstruct histories of atmospheric deposition. Assessing the independent effects of climate warming on mercury sequestration is challenging due to temporal overlap between warming temperatures and increased long-range transport of atmospheric mercury following the Industrial Revolution. We address this challenge by examining mercury trends in short cores (the last several hundred years) from eight lakes centered on Cape Herschel (Canadian High Arctic) that span a gradient in microclimates, including two lakes that have not yet been significantly altered by climate warming due to continued ice cover. Previous research on subfossil diatoms and inferred primary production indicated the timing of limnological responses to climate warming, which, due to prevailing ice cover conditions, varied from ∼1850 to ∼1990 for lakes that have undergone changes. We show that climate warming may have enhanced mercury deposition to lake sediments in one lake (Moraine Pond), while another (West Lake) showed a strong signal of post-industrial mercury enrichment without any corresponding limnological changes associated with warming. Our results provide insights into the role of climate warming and organic carbon cycling as drivers of mercury deposition to Arctic lake sediments. Copyright © 2018 Elsevier Ltd. All rights reserved.

Source discrimination of heavy metals in sediment and water of To Lich River in Hanoi City using multivariate statistical approaches.

PubMed

Thuong, Nguyen Thi; Yoneda, Minoru; Ikegami, Maiko; Takakura, Masato

2013-10-01

The concentrations of Mn, Fe, Ni, Cr, Cu, Pb, Zn, As, and Cd were determined to evaluate the level of contamination of To Lich River in Hanoi City. All metal concentrations in 0-10-cm water samples, except Mn, were lower than the maximum permitted concentration for irrigation water standard. Meanwhile, concentrations of As, Cd, and Zn in 0-30-cm sediments were likely to have adverse effects on agriculture and aquatic life. Sediment pollution assessment was undertaken using enrichment factor and geoaccumulation index (I geo). The I geo results indicated that the sediment was not polluted with Cr, Mn, Fe, and Ni, and the pollution level increased in the order of Cu < Pb < Zn < As < Cd. Meanwhile, significant enrichment was shown for Cd, As, Zn, and Pb. Cluster and principal component analyses suggest that As and Mn in sediment were derived from both lithogenic and anthropogenic sources, while Cu, Pb, Zn, Cr, Cd, and Ni originated from anthropogenic sources such as vehicular fumes for Pb and metallic discharge from industrial sources and fertilizer application for other metals.

Three sensitive species

DOE Office of Scientific and Technical Information (OSTI.GOV)

Calix, R.E.; Diener, D.

1995-12-31

MEC Analytical Systems, Inc., has conducted marine monitoring of a large ocean wastewater outfall since 1985. This EPA mandated monitoring program was designed to measure the spatial and temporal variability of the biological communities and assess the impact associated with the discharge. The ostracod Euphilomedes carcarodonta, has shown enhanced abundances centered at the outfall since the late 70`s. While flow rates continue to increase the concentration of solids and contaminants has been decreasing with improve treatment levels. However the abundance and spatial distribution of this species has remain relatively unchanged. It is hypothesized that this species feeds on the smallmore » organic particles. In contrast, the abundance of the polychaete Capitella capitata, an indicator of disturbed habitat and organic enrichment, has decreased significantly. This decrease correlates with decreasing concentrations of wastewater solids and decreasing sediment organic carbon concentrations. The brittle star, Amphiodia urtica, has been found to be one of the most sensitive species to wastewater discharges and its abundance was significantly decreased over a large area in the 70`s. Since 1985 this species has shown a steady recovery of abundance to areas near the discharge. This recovery correlates with lower sediment contaminant levels and decreased solid concentrations, and indicates that the environmental quality near the discharge is similar to reference areas.« less

Rare earth elements (REE) and yttrium in stream waters, stream sediments, and Fe Mn oxyhydroxides: Fractionation, speciation, and controls over REE + Y patterns in the surface environment

NASA Astrophysics Data System (ADS)

Leybourne, Matthew I.; Johannesson, Karen H.

2008-12-01

We have collected ˜500 stream waters and associated bed-load sediments over an ˜400 km 2 region of Eastern Canada and analyzed these samples for Fe, Mn, and the rare earth elements (REE + Y). In addition to analyzing the stream sediments by total digestion (multi-acid dissolution with metaborate fusion), we also leached the sediments with 0.25 M hydroxylamine hydrochloride (in 0.05 M HCl), to determine the REE + Y associated with amorphous Fe- and Mn-oxyhydroxide phases. We are thus able to partition the REE into "dissolved" (<0.45 μm), labile (hydroxylamine) and detrital sediment fractions to investigate REE fractionation, and in particular, with respect to the development of Ce and Eu anomalies in oxygenated surface environments. Surface waters are typically LREE depleted ([La/Sm] NASC ranges from 0.16 to 5.84, average = 0.604, n = 410; where the REE are normalized to the North America Shale Composite), have strongly negative Ce anomalies ([Ce/Ce ∗] NASC ranges from 0.02 to 1.25, average = 0.277, n = 354), and commonly have positive Eu anomalies ([Eu/Eu ∗] NASC ranges from 0.295 to 1.77, average = 0.764, n = 84). In contrast, the total sediment have flatter REE + Y patterns relative to NASC ([La/Sm] NASC ranges from 0.352 to 1.12, average = 0.778, n = 451) and are slightly middle REE enriched ([Gd/Yb] NASC ranges from 0.55 to 3.75, average = 1.42). Most total sediments have negative Ce and Eu anomalies ([Ce/Ce ∗] NASC ranges from 0.097 to 2.12, average = 0.799 and [Eu/Eu ∗] NASC ranges from 0.39 to 1.43, average = 0.802). The partial extraction sediments are commonly less LREE depleted than the total sediments ([La/Sm] NASC ranges from 0.24 to 3.31, average = 0.901, n = 4537), more MREE enriched ([Gd/Yb] NASC ranges from 0.765 to 6.28, average = 1.97) and Ce and Eu anomalies (negative and positive) are more pronounced. The partial extraction recovered, on average ˜20% of the Fe in the total sediment, ˜80% of the Mn, and 21-29% of the REEs (Ce = 19% and Y = 32%). Comparison between REEs in water, partial extraction and total sediment analyses indicates that REEs + Y in the stream sediments have two primary sources, the host lithologies (i.e., mechanical dispersion) and hydromorphically transported (the labile fraction). Furthermore, Eu appears to be more mobile than the other REE, whereas Ce is preferentially removed from solution and accumulates in the stream sediments in a less labile form than the other REEs + Y. Despite poor statistical correlations between the REEs + Y and Mn in either the total sediment or partial extractions, based on apparent distribution coefficients and the pH of the stream waters, we suggest that either sediment organic matter and/or possibly δ-MnO 2/FeOOH are likely the predominant sinks for Ce, and to a lesser extent the other REE, in the stream sediments.

Enrichment and identification of polycyclic aromatic compound-degrading bacteria enriched from sediment samples.

PubMed

Long, Rachel M; Lappin-Scott, Hilary M; Stevens, Jamie R

2009-07-01

The degradation of polycyclic aromatic compounds (PACs) has been widely studied. Knowledge of the degradation of PACs by microbial populations can be utilized in the remediation of contaminated sites. To isolate and identify PAC-degrading bacteria for potential use in future bioremediation programmes, we established a series of PAC enrichments under the same experimental conditions from a single sediment sample taken from a highly polluted estuarine site. Enrichment cultures were established using the pollutants: anthracene, phenanthrene and dibenzothiophene as a sole carbon source. The shift in microbial community structure on each of these carbon sources was monitored by analysis of a time series of samples from each culture using 16S rRNA polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE). Significantly, our findings demonstrate that shifts in the constituent species within each degradative community are directly attributable to enrichment with different PACs. Subsequently, we characterized the microorganisms comprising the degradative communities within each enrichment using 16S rRNA sequence data. Our findings demonstrate that the ability to degrade PACs is present in five divisions of the Proteobacteria and Actinobacteria. By determining the precise identity of the PAC-degrading bacterial species isolated from a single sediment sample, and by comparing our findings with previously published research, we demonstrate how bacteria with similar PAC degrading capabilities and 16S rRNA signatures are found in similarly polluted environments in geographically very distant locations, e.g., China, Italy, Japan and Hawaii. Such a finding suggests that geographical barriers do not limit the distribution of key PAC-degrading bacteria; this finding is in accordance with the Baas-Becking hypothesis "everything is everywhere; the environment selects" and may have significant consequences for the global distribution of PAC-degrading bacteria and their use in bioremediation.