Science.gov

Sample records for oxygen trim control

  1. 14 CFR 29.161 - Trim control.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 14 Aeronautics and Space 1 2012-01-01 2012-01-01 false Trim control. 29.161 Section 29.161... STANDARDS: TRANSPORT CATEGORY ROTORCRAFT Flight Flight Characteristics § 29.161 Trim control. The trim control— (a) Must trim any steady longitudinal, lateral, and collective control forces to zero in...

  2. 14 CFR 27.161 - Trim control.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 14 Aeronautics and Space 1 2012-01-01 2012-01-01 false Trim control. 27.161 Section 27.161... STANDARDS: NORMAL CATEGORY ROTORCRAFT Flight Flight Characteristics § 27.161 Trim control. The trim control— (a) Must trim any steady longitudinal, lateral, and collective control forces to zero in level...

  3. Moving mass trim control system design

    SciTech Connect

    Byrne, R.H.; Robinett, R.D.; Sturgis, B.R.

    1996-03-01

    This paper describes the design of a moving mass trim control system for maneuvering axisymmetric reentry vehicles. The moving mass trim controller is composed of three equal masses that are independently positioned in order to deliver a desired center of mass position. For a slowly spinning reentry vehicle, the mass offset creates a trim angle-of-attack to generate modest flight path corrections. The control system must maintain the desired position of each mass in the face of large disturbances. A novel algorithm for determining the desired mass positions is developed in conjunction with a preliminary controller design. The controller design is based on classical frequency domain techniques where a bound on the disturbance magnitude is used to formulate the disturbance rejection problem. Simulation results for the controller are presented for a typical reentry vehicle.

  4. Moving mass trim control for aerospace vehicles

    NASA Astrophysics Data System (ADS)

    Robinett, R. D.; Rainwater, B. A.; Kerr, S. A.

    A moving mass trim controller increases the accuracy of axisymmetric, ballistic vehicles. The MMTC is different than other moving mass schemes because it generates an angle-of-attack (AOA) directly from the mass motion. The nonlinear equations of motion for a ballistic vehicle with one moving point mass are derived and provide the basis for a detailed simulation model. The full nonlinear equations are linearized to produce a set of linear, time-varying autopilot equations. These autopilot equations are analyzed and used to develop theoretical design tools for the creation of MMTC's for both fast and slow spinning vehicles. A fast spinning MMTC is designed for a generic artillery rocket that uses principal axis misalignment to generate trim AOA. A slow spinning is designed for a generic reentry vehicle that generates a trim AOA with a center of mass offset and aerodynamic drag. The performance of both MMTC's are evaluated with the detailed simulation.

  5. Matlab Stability and Control Toolbox: Trim and Static Stability Module

    NASA Technical Reports Server (NTRS)

    Crespo, Luis G.; Kenny, Sean P.

    2006-01-01

    This paper presents the technical background of the Trim and Static module of the Matlab Stability and Control Toolbox. This module performs a low-fidelity stability and control assessment of an aircraft model for a set of flight critical conditions. This is attained by determining if the control authority available for trim is sufficient and if the static stability characteristics are adequate. These conditions can be selected from a prescribed set or can be specified to meet particular requirements. The prescribed set of conditions includes horizontal flight, take-off rotation, landing flare, steady roll, steady turn and pull-up/ push-over flight, for which several operating conditions can be specified. A mathematical model was developed allowing for six-dimensional trim, adjustable inertial properties, asymmetric vehicle layouts, arbitrary number of engines, multi-axial thrust vectoring, engine(s)-out conditions, crosswind and gyroscopic effects.

  6. Investigation of Mask Inclination Due to Oxygen-Radical Irradiation during Resist Trimming

    NASA Astrophysics Data System (ADS)

    Kofuji, Naoyuki; Miura, Hideo

    2010-08-01

    A novel analytical method for predicting the inclination of a resist mask during its trimming process has been proposed by considering the formation of the surface degraded layer with high compressive stress. It was found that the irradiation of oxygen radicals creates a degraded layer on the resist surface and causes high compressive stress in it. A nonuniform spatial distribution of oxygen radicals, therefore, causes an asymmetrical stress field on the resist-mask surface. Such an asymmetrical stress field distorts the resist mask. The well-known Deal-Grove's oxidation model was modified for the trimming process by considering the time-dependent change of the spatial distribution of oxygen radicals on the mask surface. This model successfully explains the observed complicated time-dependent deformation of the resist mask.

  7. Helicopter trimming and tracking control using direct neural dynamic programming.

    PubMed

    Enns, R; Si, Jennie

    2003-01-01

    This paper advances a neural-network-based approximate dynamic programming control mechanism that can be applied to complex control problems such as helicopter flight control design. Based on direct neural dynamic programming (DNDP), an approximate dynamic programming methodology, the control system is tailored to learn to maneuver a helicopter. The paper consists of a comprehensive treatise of this DNDP-based tracking control framework and extensive simulation studies for an Apache helicopter. A trim network is developed and seamlessly integrated into the neural dynamic programming (NDP) controller as part of a baseline structure for controlling complex nonlinear systems such as a helicopter. Design robustness is addressed by performing simulations under various disturbance conditions. All designs are tested using FLYRT, a sophisticated industrial scale nonlinear validated model of the Apache helicopter. This is probably the first time that an approximate dynamic programming methodology has been systematically applied to, and evaluated on, a complex, continuous state, multiple-input multiple-output nonlinear system with uncertainty. Though illustrated for helicopters, the DNDP control system framework should be applicable to general purpose tracking control.

  8. Development and Operation of an Automatic Rotor Trim Control System for the UH-60 Individual Blade Control Wind Tunnel Test

    NASA Technical Reports Server (NTRS)

    Theodore, Colin R.; Tischler, Mark B.

    2010-01-01

    An automatic rotor trim control system was developed and successfully used during a wind tunnel test of a full-scale UH-60 rotor system with Individual Blade Control (IBC) actuators. The trim control system allowed rotor trim to be set more quickly, precisely and repeatably than in previous wind tunnel tests. This control system also allowed the rotor trim state to be maintained during transients and drift in wind tunnel flow, and through changes in IBC actuation. The ability to maintain a consistent rotor trim state was key to quickly and accurately evaluating the effect of IBC on rotor performance, vibration, noise and loads. This paper presents details of the design and implementation of the trim control system including the rotor system hardware, trim control requirements, and trim control hardware and software implementation. Results are presented showing the effect of IBC on rotor trim and dynamic response, a validation of the rotor dynamic simulation used to calculate the initial control gains and tuning of the control system, and the overall performance of the trim control system during the wind tunnel test.

  9. MATLAB Stability and Control Toolbox Trim and Static Stability Module

    NASA Technical Reports Server (NTRS)

    Kenny, Sean P.; Crespo, Luis

    2012-01-01

    MATLAB Stability and Control Toolbox (MASCOT) utilizes geometric, aerodynamic, and inertial inputs to calculate air vehicle stability in a variety of critical flight conditions. The code is based on fundamental, non-linear equations of motion and is able to translate results into a qualitative, graphical scale useful to the non-expert. MASCOT was created to provide the conceptual aircraft designer accurate predictions of air vehicle stability and control characteristics. The code takes as input mass property data in the form of an inertia tensor, aerodynamic loading data, and propulsion (i.e. thrust) loading data. Using fundamental nonlinear equations of motion, MASCOT then calculates vehicle trim and static stability data for the desired flight condition(s). Available flight conditions include six horizontal and six landing rotation conditions with varying options for engine out, crosswind, and sideslip, plus three take-off rotation conditions. Results are displayed through a unique graphical interface developed to provide the non-stability and control expert conceptual design engineer a qualitative scale indicating whether the vehicle has acceptable, marginal, or unacceptable static stability characteristics. If desired, the user can also examine the detailed, quantitative results.

  10. Control of neuronal apoptosis by reciprocal regulation of NFATc3 and Trim17

    PubMed Central

    Mojsa, B; Mora, S; Bossowski, J P; Lassot, I; Desagher, S

    2015-01-01

    Neuronal apoptosis induced by survival factor deprivation is strongly regulated at the transcriptional level. Notably, the nuclear factor of activated T cell (NFAT) transcription factors have an important role in the control of the survival/death fate of neurons. However, the mechanisms that regulate NFAT activity in response to apoptotic stimuli and the target genes that mediate their effect on neuronal apoptosis are mostly unknown. In a previous study, we identified Trim17 as a crucial E3 ubiquitin ligase that is necessary and sufficient for neuronal apoptosis. Here, we show that Trim17 binds preferentially SUMOylated forms of NFATc3. Nonetheless, Trim17 does not promote the ubiquitination/degradation of NFATc3. NFAT transcription factors are regulated by calcium/calcineurin-dependent nuclear-cytoplasmic shuttling. Interestingly, Trim17 reduced by twofold the calcium-mediated nuclear localization of NFATc3 and, consistent with this, halved NFATc3 activity, as estimated by luciferase assays and by measurement of target gene expression. Trim17 also inhibited NFATc4 nuclear translocation and activity. NFATc4 is known to induce the expression of survival factors and, as expected, overexpression of NFATc4 protected cerebellar granule neurons from serum/KCl deprivation-induced apoptosis. Inhibition of NFATc4 by Trim17 may thus partially mediate the proapoptotic effect of Trim17. In contrast, overexpression of NFATc3 aggravated neuronal death, whereas knockdown of NFATc3 protected neurons from apoptosis. This proapoptotic effect of NFATc3 might be due to a feedback loop in which NFATc3, but not NFATc4, induces the transcription of the proapoptotic gene Trim17. Indeed, we found that overexpression or silencing of NFATc3, respectively, increased or decreased Trim17 levels, whereas NFATc4 had no significant effect on Trim17 expression. Moreover, we showed that NFATc3 binds to the promoter of the Trim17 gene together with c-Jun. Therefore, our results describe a novel

  11. Ubiquitin ligase TRIM3 controls hippocampal plasticity and learning by regulating synaptic γ-actin levels.

    PubMed

    Schreiber, Joerg; Végh, Marlene J; Dawitz, Julia; Kroon, Tim; Loos, Maarten; Labonté, Dorthe; Li, Ka Wan; Van Nierop, Pim; Van Diepen, Michiel T; De Zeeuw, Chris I; Kneussel, Matthias; Meredith, Rhiannon M; Smit, August B; Van Kesteren, Ronald E

    2015-11-01

    Synaptic plasticity requires remodeling of the actin cytoskeleton. Although two actin isoforms, β- and γ-actin, are expressed in dendritic spines, the specific contribution of γ-actin in the expression of synaptic plasticity is unknown. We show that synaptic γ-actin levels are regulated by the E3 ubiquitin ligase TRIM3. TRIM3 protein and Actg1 transcript are colocalized in messenger ribonucleoprotein granules responsible for the dendritic targeting of messenger RNAs. TRIM3 polyubiquitylates γ-actin, most likely cotranslationally at synaptic sites. Trim3(-/-) mice consequently have increased levels of γ-actin at hippocampal synapses, resulting in higher spine densities, increased long-term potentiation, and enhanced short-term contextual fear memory consolidation. Interestingly, hippocampal deletion of Actg1 caused an increase in long-term fear memory. Collectively, our findings suggest that temporal control of γ-actin levels by TRIM3 is required to regulate the timing of hippocampal plasticity. We propose a model in which TRIM3 regulates synaptic γ-actin turnover and actin filament stability and thus forms a transient inhibitory constraint on the expression of hippocampal synaptic plasticity. PMID:26527743

  12. Ubiquitin ligase TRIM3 controls hippocampal plasticity and learning by regulating synaptic γ-actin levels

    PubMed Central

    Schreiber, Joerg; Végh, Marlene J.; Dawitz, Julia; Kroon, Tim; Loos, Maarten; Labonté, Dorthe; Li, Ka Wan; Van Nierop, Pim; Van Diepen, Michiel T.; De Zeeuw, Chris I.; Kneussel, Matthias; Meredith, Rhiannon M.; Smit, August B.

    2015-01-01

    Synaptic plasticity requires remodeling of the actin cytoskeleton. Although two actin isoforms, β- and γ-actin, are expressed in dendritic spines, the specific contribution of γ-actin in the expression of synaptic plasticity is unknown. We show that synaptic γ-actin levels are regulated by the E3 ubiquitin ligase TRIM3. TRIM3 protein and Actg1 transcript are colocalized in messenger ribonucleoprotein granules responsible for the dendritic targeting of messenger RNAs. TRIM3 polyubiquitylates γ-actin, most likely cotranslationally at synaptic sites. Trim3−/− mice consequently have increased levels of γ-actin at hippocampal synapses, resulting in higher spine densities, increased long-term potentiation, and enhanced short-term contextual fear memory consolidation. Interestingly, hippocampal deletion of Actg1 caused an increase in long-term fear memory. Collectively, our findings suggest that temporal control of γ-actin levels by TRIM3 is required to regulate the timing of hippocampal plasticity. We propose a model in which TRIM3 regulates synaptic γ-actin turnover and actin filament stability and thus forms a transient inhibitory constraint on the expression of hippocampal synaptic plasticity. PMID:26527743

  13. Flight Investigation of the Effectiveness of an Automatic Aileron Trim Control Device for Personal Airplanes

    NASA Technical Reports Server (NTRS)

    Phillips, William H; Kuehnel, Helmut A; Whitten, James B

    1957-01-01

    A flight investigation to determine the effectiveness of an automatic aileron trim control device installed in a personal airplane to augment the apparent spiral stability has been conducted. The device utilizes a rate-gyro sensing element in order to switch an on-off type of control that operates the ailerons at a fixed rate through control centering springs. An analytical study using phase-plane and analog-computer methods has been carried out to determine a desirable method of operation for the automatic trim control.

  14. Application of a Broadband Active Vibration Control System to a Helicopter Trim Panel

    NASA Technical Reports Server (NTRS)

    Cabell, Randolph H.; Schiller, Noah H.; Simon, Frank

    2013-01-01

    This paper discusses testing of a broadband active vibration control concept on an interior trim panel in a helicopter cabin mockup located at ONERA's Centre de Toulouse. The control system consisted of twelve diamond-shaped piezoelectric actuators distributed around a 1.2m x 1.2m trim panel. Accelerometers were mounted at the four vertices of each diamond. The aspect ratio of the diamond was based on the dielectric constants of the piezoelectric material in order to create an actuator-sensor pair that was collocated over a broad frequency range. This allowed robust control to be implemented using simple, low power analog electronics. Initial testing on a thick acrylic window demonstrated the capability of the controller, but actuator performance was less satisfactory when mounted on a composite sandwich trim panel. This may have been due to the orthotropic nature of the trim panel, or due to its much higher stiffness relative to the acrylic window. Insights gained from a finite element study of the actuator-sensor-structural system are discussed.

  15. Effect of early lactation foot trimming in lame and non-lame dairy heifers: a randomised controlled trial.

    PubMed

    Maxwell, O J R; Hudson, C D; Huxley, J N

    2015-07-25

    Foot trimming is a common management intervention in prevention of lameness in dairy cattle. Despite this, there is surprisingly limited experimental evidence on its efficacy, especially in regard to primiparous heifers. A randomised, negatively controlled trial was conducted to investigate the association between an early lactation foot trim on primiparous animals and production outcomes. 282 heifers were enrolled from eight farms in the UK, and randomly assigned to treatment or control groups. Milk yield (305-day-adjusted whole-milk yield) was not significantly different between groups (trimmed 7727 litres, untrimmed 7646 litres). However, multivariate regression analysis demonstrated that this relationship was confounded by lameness state. Animals that were lame at the time of trimming gave significantly more milk (734 litres, P=0.02) than those that were non-lame and untrimmed. The present results suggest that, based on milk production alone, it would not have been cost beneficial to trim all heifers; however, a targeted intervention aimed at lame animals would have delivered a substantial return on investment. As a very minimum, the authors recommend heifers should be regularly assessed in early lactation, and treated as soon as they are identifiably lame. The high prevalence of lesions identified suggests routine trimming for all heifers may be justifiable on welfare grounds even if the milk-yield benefits are marginal. PMID:26116268

  16. TRIM46 Controls Neuronal Polarity and Axon Specification by Driving the Formation of Parallel Microtubule Arrays.

    PubMed

    van Beuningen, Sam F B; Will, Lena; Harterink, Martin; Chazeau, Anaël; van Battum, Eljo Y; Frias, Cátia P; Franker, Mariella A M; Katrukha, Eugene A; Stucchi, Riccardo; Vocking, Karin; Antunes, Ana T; Slenders, Lotte; Doulkeridou, Sofia; Sillevis Smitt, Peter; Altelaar, A F Maarten; Post, Jan A; Akhmanova, Anna; Pasterkamp, R Jeroen; Kapitein, Lukas C; de Graaff, Esther; Hoogenraad, Casper C

    2015-12-16

    Axon formation, the initial step in establishing neuronal polarity, critically depends on local microtubule reorganization and is characterized by the formation of parallel microtubule bundles. How uniform microtubule polarity is achieved during axonal development remains an outstanding question. Here, we show that the tripartite motif containing (TRIM) protein TRIM46 plays an instructive role in the initial polarization of neuronal cells. TRIM46 is specifically localized to the newly specified axon and, at later stages, partly overlaps with the axon initial segment (AIS). TRIM46 specifically forms closely spaced parallel microtubule bundles oriented with their plus-end out. Without TRIM46, all neurites have a dendrite-like mixed microtubule organization resulting in Tau missorting and altered cargo trafficking. By forming uniform microtubule bundles in the axon, TRIM46 is required for neuronal polarity and axon specification in vitro and in vivo. Thus, TRIM46 defines a unique axonal cytoskeletal compartment for regulating microtubule organization during neuronal development.

  17. Cassini Orbit Trim Maneuvers at Saturn - Overview of Attitude Control Flight Operations

    NASA Technical Reports Server (NTRS)

    Burk, Thomas A.

    2011-01-01

    The Cassini spacecraft has been in orbit around Saturn since July 1, 2004. To remain on the planned trajectory which maximizes science data return, Cassini must perform orbit trim maneuvers using either its main engine or its reaction control system thrusters. Over 200 maneuvers have been executed on the spacecraft since arrival at Saturn. To improve performance and maintain spacecraft health, changes have been made in maneuver design command placement, in accelerometer scale factor, and in the pre-aim vector used to align the engine gimbal actuator prior to main engine burn ignition. These and other changes have improved maneuver performance execution errors significantly since 2004. A strategy has been developed to decide whether a main engine maneuver should be performed, or whether the maneuver can be executed using the reaction control system.

  18. Reducing Pointing Errors During Cassini Reaction Control System Orbit Trim Maneuvers

    NASA Technical Reports Server (NTRS)

    Rizvi, Farheen

    2013-01-01

    The effect of altering a gain parameter in the Cassini reaction control system (RCS) delta-V controller on the maneuver execution errors during orbit trim maneuvers (OTMs) is explored. Cassini consists of two reaction control thruster branches (A & B) each with eight thrusters. Currently, the B-branch is operational while the A-branch serves as a back-up. The four Z-thrusters control the X and Y-axes, while the four Y-thrusters control the Z-axis. During an OTM, the Z-thrusters fire to maintain the X and Y-axes pointing within an attitude control dead-zone (-10 to 10 milliradians). The errors do not remain at zero due to pointing error sources such as spacecraft center of mass offset from the geometric center of the Z-facing thrusters, and variability in the thruster forces due to the thruster hardware differences. The delta-V reaction control system (RCS) controller ensures that the attitude error remains within this dead-zone. Gain parameters within the RCS delta-V controller affect the maneuver execution errors. Different parameter values are used to explore effect on these errors. It is found that pointing error decreases and magnitude error increases rapidly for gain parameters 10 times greater than the current parameter values used in the flight software.

  19. Synthesis of a PID-controller of a trim robust control system of an autonomous underwater vehicle

    NASA Astrophysics Data System (ADS)

    Khozhaev, I. V.; Gayvoronskiy, S. A.

    2016-04-01

    Autonomous underwater vehicles are often used for performing scientific, emergency or other types of missions under harsh conditions and environments, which can have non-stable, variable parameters. So, the problem of developing autonomous underwater vehicle motion control systems, capable of operating properly in random environments, is highly relevant. The paper is dedicated to the synthesis of a PID-controller of a trim robust control system, capable of keeping an underwater vehicle stable during a translation at different angles of attack. In order to synthesize the PID-controller, two problems were solved: a new method of synthesizing a robust controller was developed and a mathematical model of an underwater vehicle motion process was derived. The newly developed mathematical model structure is simpler than others due to acceptance of some of the system parameters as interval ones. The synthesis method is based on a system poles allocation approach and allows providing the necessary transient process quality in a considered system.

  20. Maximising municipal solid waste--legume trimming residue mixture degradation in composting by control parameters optimization.

    PubMed

    Cabeza, I O; López, R; Ruiz-Montoya, M; Díaz, M J

    2013-10-15

    Composting is one of the most successful biological processes for the treatment of the residues enriched in putrescible materials. The optimization of parameters which have an influence on the stability of the products is necessary in order to maximize recycling and recovery of waste components. The influence of the composting process parameters (aeration, moisture, C/N ratio, and time) on the stability parameters (organic matter, N-losses, chemical oxygen demand, nitrate, biodegradability coefficient) of the compost was studied. The composting experiment was carried out using Municipal Solid Waste (MSW) and Legume Trimming Residues (LTR) in 200 L isolated acrylic barrels following a Box-Behnken central composite experimental design. Second-order polynomial models were found for each of the studied compost stability parameter, which accurately described the relationship between the parameters. The differences among the experimental values and those estimated by using the equations never exceeded 10% of the former. Results of the modelling showed that excluding the time, the C/N ratio is the strongest variable influencing almost all the stability parameters studied in this case, with the exception of N-losses which is strongly dependent on moisture. Moreover, an optimized ratio MSW/LTR of 1/1 (w/w), moisture content in the range of 40-55% and moderate to low aeration rate (0.05-0.175 Lair kg(-)(1) min(-1)) is recommended to maximise degradation and to obtain a stable product during co-composting of MSW and LTR. PMID:23764508

  1. 14 CFR 25.677 - Trim systems.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... designed to prevent creeping in flight. Trim tab controls must be irreversible unless the tab is... STANDARDS: TRANSPORT CATEGORY AIRPLANES Design and Construction Control Systems § 25.677 Trim systems. (a) Trim controls must be designed to prevent inadvertent or abrupt operation and to operate in the...

  2. 14 CFR 25.677 - Trim systems.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... designed to prevent creeping in flight. Trim tab controls must be irreversible unless the tab is... STANDARDS: TRANSPORT CATEGORY AIRPLANES Design and Construction Control Systems § 25.677 Trim systems. (a) Trim controls must be designed to prevent inadvertent or abrupt operation and to operate in the...

  3. 14 CFR 25.677 - Trim systems.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... designed to prevent creeping in flight. Trim tab controls must be irreversible unless the tab is... STANDARDS: TRANSPORT CATEGORY AIRPLANES Design and Construction Control Systems § 25.677 Trim systems. (a) Trim controls must be designed to prevent inadvertent or abrupt operation and to operate in the...

  4. 14 CFR 25.677 - Trim systems.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... designed to prevent creeping in flight. Trim tab controls must be irreversible unless the tab is... STANDARDS: TRANSPORT CATEGORY AIRPLANES Design and Construction Control Systems § 25.677 Trim systems. (a) Trim controls must be designed to prevent inadvertent or abrupt operation and to operate in the...

  5. System and method for air temperature control in an oxygen transport membrane based reactor

    DOEpatents

    Kelly, Sean M

    2016-09-27

    A system and method for air temperature control in an oxygen transport membrane based reactor is provided. The system and method involves introducing a specific quantity of cooling air or trim air in between stages in a multistage oxygen transport membrane based reactor or furnace to maintain generally consistent surface temperatures of the oxygen transport membrane elements and associated reactors. The associated reactors may include reforming reactors, boilers or process gas heaters.

  6. Predictions of Control Inputs, Periodic Responses and Damping Levels of an Isolated Experimental Rotor in Trimmed Flight

    NASA Technical Reports Server (NTRS)

    Gaonkar, G. H.; Subramanian, S.

    1996-01-01

    Since the early 1990s the Aeroflightdynamics Directorate at the Ames Research Center has been conducting tests on isolated hingeless rotors in hover and forward flight. The primary objective is to generate a database on aeroelastic stability in trimmed flight for torsionally soft rotors at realistic tip speeds. The rotor test model has four soft inplane blades of NACA 0012 airfoil section with low torsional stiffness. The collective pitch and shaft tilt are set prior to each test run, and then the rotor is trimmed in the following sense: the longitudinal and lateral cyclic pitch controls are adjusted through a swashplate to minimize the 1/rev flapping moment at the 12 percent radial station. In hover, the database comprises lag regressive-mode damping with pitch variations. In forward flight the database comprises cyclic pitch controls, root flap moment and lag regressive-mode damping with advance ratio, shaft angle and pitch variations. This report presents the predictions and their correlation with the database. A modal analysis is used, in which nonrotating modes in flap bending, lag bending and torsion are computed from the measured blade mass and stiffness distributions. The airfoil aerodynamics is represented by the ONERA dynamic stall models of lift, drag and pitching moment, and the wake dynamics is represented by a state-space wake model. The trim analysis of finding, the cyclic controls and the corresponding, periodic responses is based on periodic shooting with damped Newton iteration; the Floquet transition matrix (FTM) comes out as a byproduct. The stabillty analysis of finding the frequencies and damping levels is based on the eigenvalue-eigenvector analysis of the FTM. All the structural and aerodynamic states are included from modeling to trim analysis. A major finding is that dynamic wake dramatically improves the correlation for the lateral cyclic pitch control. Overall, the correlation is fairly good.

  7. Jefferson Lab's Trim Card II

    SciTech Connect

    Trent Allison; Sarin Philip; C. Higgins; Edward Martin; William Merz

    2005-05-01

    Jefferson Lab's Continuous Electron Beam Accelerator Facility (CEBAF) uses Trim Card I power supplies to drive approximately 1900 correction magnets. These trim cards have had a long and illustrious service record. However, some of the employed technology is now obsolete, making it difficult to maintain the system and retain adequate spares. The Trim Card II is being developed to act as a transparent replacement for its aging predecessor. A modular approach has been taken in its development to facilitate the substitution of sections for future improvements and maintenance. The resulting design has been divided into a motherboard and 7 daughter cards which has also allowed for parallel development. The Trim Card II utilizes modern technologies such as a Field Programmable Gate Array (FPGA) and a microprocessor to embed trim card controls and diagnostics. These reprogrammable devices also provide the versatility to incorporate future requirements.

  8. High pressure spray with water shows similar efficiency to trimming in controlling microorganisms on poultry carcasses.

    PubMed

    Giombelli, Audecir; Hammerschmitt, Dandara; Cerutti, Marisete F; Chiarini, Eb; Landgraf, Mariza; Franco, Bernardete D G M; Destro, Maria T

    2015-10-01

    A study was conducted to evaluate a high pressure spray (HPS) with water as an alternative to trimming to remove gastrointestinal contamination on poultry carcasses and improve microbiological quality. The study was conducted under commercial conditions in 5 slaughter plants with one plant presenting approximately 5% of carcasses with visible gastrointestinal contamination (VGC), and the others showing approximately 12% of VGC. In all 5 plants, carcasses were sampled from the slaughter line and separated into 6 groups corresponding to 3 different treatments: A) carcasses with VGC before and after trimming; B) carcasses with VGC before and after HPS; and C) carcasses with no VGC before and after HPS. At the end of Trial A and prior to Trials B and C, an HPS equipment was installed before the end of the slaughter line. The HPS equipment was operated with 10 kgf/cm² of pressure and 1.5 L of potable water per carcass. Carcasses were analyzed using a rinsing procedure, and the following microbiological parameters were evaluated: the prevalence of Salmonella and Campylobacter, the abundance of Escherichia coli (EC), Enterobacteriaceae (EB), and the Total Viable Count (TVC). Salmonella was found in all plants at a prevalence ranging from 0.8% (plant 1) to 17.3% (plant 5), and the difference between plants was significant (P < 0.05%). The prevalence of Campylobacter ranged from 2.1 (plant 1) to 18.6% (plant 4) (P < 0.05%). The prevalence of Campylobacter was similar in plants 2, 3, and 5, and a significant difference (P < 0.05%) was observed compared to plants 1 and 4. In all plants, the EC, EB, and TVC counts did not show a significant difference (P > 0.05%) in any treatments. These results demonstrate that HPS with water is an alternative method for removing VGC and improving or maintaining the microbiological quality and safety of broiler carcasses.

  9. High pressure spray with water shows similar efficiency to trimming in controlling microorganisms on poultry carcasses.

    PubMed

    Giombelli, Audecir; Hammerschmitt, Dandara; Cerutti, Marisete F; Chiarini, Eb; Landgraf, Mariza; Franco, Bernardete D G M; Destro, Maria T

    2015-10-01

    A study was conducted to evaluate a high pressure spray (HPS) with water as an alternative to trimming to remove gastrointestinal contamination on poultry carcasses and improve microbiological quality. The study was conducted under commercial conditions in 5 slaughter plants with one plant presenting approximately 5% of carcasses with visible gastrointestinal contamination (VGC), and the others showing approximately 12% of VGC. In all 5 plants, carcasses were sampled from the slaughter line and separated into 6 groups corresponding to 3 different treatments: A) carcasses with VGC before and after trimming; B) carcasses with VGC before and after HPS; and C) carcasses with no VGC before and after HPS. At the end of Trial A and prior to Trials B and C, an HPS equipment was installed before the end of the slaughter line. The HPS equipment was operated with 10 kgf/cm² of pressure and 1.5 L of potable water per carcass. Carcasses were analyzed using a rinsing procedure, and the following microbiological parameters were evaluated: the prevalence of Salmonella and Campylobacter, the abundance of Escherichia coli (EC), Enterobacteriaceae (EB), and the Total Viable Count (TVC). Salmonella was found in all plants at a prevalence ranging from 0.8% (plant 1) to 17.3% (plant 5), and the difference between plants was significant (P < 0.05%). The prevalence of Campylobacter ranged from 2.1 (plant 1) to 18.6% (plant 4) (P < 0.05%). The prevalence of Campylobacter was similar in plants 2, 3, and 5, and a significant difference (P < 0.05%) was observed compared to plants 1 and 4. In all plants, the EC, EB, and TVC counts did not show a significant difference (P > 0.05%) in any treatments. These results demonstrate that HPS with water is an alternative method for removing VGC and improving or maintaining the microbiological quality and safety of broiler carcasses. PMID:26286999

  10. 14 CFR 25.407 - Trim tab effects.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... STANDARDS: TRANSPORT CATEGORY AIRPLANES Structure Control Surface and System Loads § 25.407 Trim tab effects. The effects of trim tabs on the control surface design conditions must be accounted for only where the..., those required to trim the airplane at any point within the positive portion of the pertinent...

  11. 14 CFR 25.407 - Trim tab effects.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... STANDARDS: TRANSPORT CATEGORY AIRPLANES Structure Control Surface and System Loads § 25.407 Trim tab effects. The effects of trim tabs on the control surface design conditions must be accounted for only where the..., those required to trim the airplane at any point within the positive portion of the pertinent...

  12. Role of N-linked oligosaccharide recognition, glucose trimming, and calnexin in glycoprotein folding and quality control.

    PubMed Central

    Hammond, C; Braakman, I; Helenius, A

    1994-01-01

    Using a pulse-chase approach combined with immunoprecipitation, we showed that newly synthesized influenza virus hemagglutinin (HA) and vesicular stomatitis virus G protein associate transiently during their folding with calnexin, a membrane-bound endoplasmic reticulum (ER) chaperone. Inhibitors of N-linked glycosylation (tunicamycin) and glucosidases I and II (castanospermine and 1-deoxynojirimycin) prevented the association, whereas inhibitors of ER alpha-mannosidases did not. Our results indicated that binding of these viral glycoproteins to calnexin correlated closely with the composition of their N-linked oligosaccharide side chains. Proteins with monoglucosylated oligosaccharides were the most likely binding species. On the basis of our data and existing information concerning the role of monoglucosylated oligosaccharides on glycoproteins, we propose that the ER contains a unique folding and quality control machinery in which calnexin acts as a chaperone that binds proteins with partially glucose-trimmed carbohydrate side chains. In this model glucosidases I and II serve as signal modifiers and UDP-glucose:glycoprotein glucosyltransferase, as a folding sensor. Images PMID:8302866

  13. Thermal trim for luminaire

    DOEpatents

    Bazydola, Sarah; Ghiu, Camil-Daniel; Harrison, Robert; Jeswani, Anil

    2013-11-19

    A luminaire with a thermal pathway to reduce the junction temperature of the luminaire's light source, and methods for so doing, are disclosed. The luminaire includes a can, a light engine, and a trim, that define a substantially continuous thermal pathway from the light engine to a surrounding environment. The can defines a can cavity and includes a can end region. The light engine is within the can cavity and includes a light source and a heat sink, including a heat sink end region, coupled thereto. The trim is at least partially disposed within the can cavity and includes a first trim end region coupled to the heat sink end region and a second trim end region coupled to the can end region. Thermal interface material may be located between: the heat sink and the trim, the trim and the can, and/or the heat sink and the light source.

  14. NCSX Trim Coil Design

    SciTech Connect

    M. Kalish, A. Brooks, J. Rushinski, R. Upcavage

    2009-05-29

    The National Compact Stellarator Experiment (NCSX) was being constructed at the Princeton Plasma Physics Laboratory in partnership with Oak Ridge National Laboratory before work was stopped in 2008. The objective of this experiment was to develop the stellarator concept and evaluate it's potential as a model for future fusion power plants. Stellarator design requires very precisely positioned Modular Coils of complex shape to form 3D plasmas. In the design of NCSX, Trim Coils were required to compensate for both the positioning of the coils during assembly and the fabrication tolerances of the Modular Coils. Use of the Trim Coils allowed for larger tolerances increasing ease of assembly and decreasing overall cost. A set of Trim coils was developed to suppress the toroidal flux in island regions due to misalignment, magnetic materials, and eddy currents. The requirement imposed upon the design forced the toroidal flux in island regions below 10% of the total toroidal flux in the plasma. An analysis was first performed to evaluate candidate Trim Coil configurations iterating both the size, number, and position of the coils. The design was optimized considering both performance and cost while staying within the tight restraints presented by the space limited geometry. The final design of the Trim Coils incorporated a 48 Coil top bottom symmetric set. Fabrication costs were minimized by having only two coil types and using a planar conventional design with off the shelf commercial conductor. The Trim Coil design incorporated supports made from simple structural shapes assembled together in a way which allowed for adjustment as well as accommodation for the tolerance build up on the mating surfaces. This paper will summarize the analysis that led to the optimization of the Trim Coils set, the trim coil mechanical design, thermal and stress analysis, and the design of the supporting Trim Coil structure.

  15. DEVICE FOR CONTROL OF OXYGEN PARTIAL PRESSURE

    DOEpatents

    Bradner, H.; Gordon, H.S.

    1957-12-24

    A device is described that can sense changes in oxygen partial pressure and cause a corresponding mechanical displacement sufficient to actuate meters, valves and similar devices. A piston and cylinder arrangement contains a charge of crystalline metal chelate pellets which have the peculiar property of responding to variations in the oxygen content of the ambient atmosphere by undergoing a change in dimension. A lever system amplifies the relative displacement of the piston in the cylinder, and actuates the controlled valving device. This partial pressure oxygen sensing device is useful in controlled chemical reactions or in respiratory devices such as the oxygen demand meters for high altitude aircraft.

  16. 14 CFR 23.677 - Trim systems.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... that, when any one connecting or transmitting element in the primary flight control system fails, adequate control for safe flight and landing is available with— (1) For single-engine airplanes, the... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Trim systems. 23.677 Section...

  17. 14 CFR 23.677 - Trim systems.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... that, when any one connecting or transmitting element in the primary flight control system fails, adequate control for safe flight and landing is available with— (1) For single-engine airplanes, the... 14 Aeronautics and Space 1 2014-01-01 2014-01-01 false Trim systems. 23.677 Section...

  18. 14 CFR 23.677 - Trim systems.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... that, when any one connecting or transmitting element in the primary flight control system fails, adequate control for safe flight and landing is available with— (1) For single-engine airplanes, the... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Trim systems. 23.677 Section...

  19. 14 CFR 23.677 - Trim systems.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... that, when any one connecting or transmitting element in the primary flight control system fails, adequate control for safe flight and landing is available with— (1) For single-engine airplanes, the... 14 Aeronautics and Space 1 2012-01-01 2012-01-01 false Trim systems. 23.677 Section...

  20. 14 CFR 23.677 - Trim systems.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... that, when any one connecting or transmitting element in the primary flight control system fails, adequate control for safe flight and landing is available with— (1) For single-engine airplanes, the... 14 Aeronautics and Space 1 2013-01-01 2013-01-01 false Trim systems. 23.677 Section...

  1. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2004-04-01

    Conventional wisdom says adding oxygen to a combustion system enhances product throughput, system efficiency, and, unless special care is taken, increases NOx emissions. This increase in NOx emissions is typically due to elevated flame temperatures associated with oxygen use leading to added thermal NOx formation. Innovative low flame temperature oxy-fuel burner designs have been developed and commercialized to minimize both thermal and fuel NOx formation for gas and oil fired industrial furnaces. To be effective these systems require close to 100% oxy-fuel combustion and the cost of oxygen is paid for by fuel savings and other benefits. For applications to coal-fired utility boilers at the current cost of oxygen, however, it is not economically feasible to use 100% oxygen for NOx control. In spite of this conventional wisdom, Praxair and its team members, in partnership with the US Department of Energy National Energy Technology Laboratory, have developed a novel way to use oxygen to reduce NOx emissions without resorting to complete oxy-fuel conversion. In this concept oxygen is added to the combustion process to enhance operation of a low NOx combustion system. Only a small fraction of combustion air is replaced with oxygen in the process. By selectively adding oxygen to a low NOx combustion system it is possible to reduce NOx emissions from nitrogen-containing fuels, including pulverized coal, while improving combustion characteristics such as unburned carbon. A combination of experimental work and modeling was used to define how well oxygen enhanced combustion could reduce NOx emissions. The results of this work suggest that small amounts of oxygen replacement can reduce the NOx emissions as compared to the air-alone system. NOx emissions significantly below 0.15 lbs/MMBtu were measured. Oxygen addition was also shown to reduce carbon in ash. Comparison of the costs of using oxygen for NOx control against competing technologies, such as SCR, show that this

  2. TRIM72 modulates caveolar endocytosis in repair of lung cells.

    PubMed

    Nagre, Nagaraja; Wang, Shaohua; Kellett, Thomas; Kanagasabai, Ragu; Deng, Jing; Nishi, Miyuki; Shilo, Konstantin; Oeckler, Richard A; Yalowich, Jack C; Takeshima, Hiroshi; Christman, John; Hubmayr, Rolf D; Zhao, Xiaoli

    2016-03-01

    Alveolar epithelial and endothelial cell injury is a major feature of the acute respiratory distress syndrome, in particular when in conjunction with ventilation therapies. Previously we showed [Kim SC, Kellett T, Wang S, Nishi M, Nagre N, Zhou B, Flodby P, Shilo K, Ghadiali SN, Takeshima H, Hubmayr RD, Zhao X. Am J Physiol Lung Cell Mol Physiol 307: L449-L459, 2014.] that tripartite motif protein 72 (TRIM72) is essential for amending alveolar epithelial cell injury. Here, we posit that TRIM72 improves cellular integrity through its interaction with caveolin 1 (Cav1). Our data show that, in primary type I alveolar epithelial cells, lack of TRIM72 led to significant reduction of Cav1 at the plasma membrane, accompanied by marked attenuation of caveolar endocytosis. Meanwhile, lentivirus-mediated overexpression of TRIM72 selectively increases caveolar endocytosis in rat lung epithelial cells, suggesting a functional association between these two. Further coimmunoprecipitation assays show that deletion of either functional domain of TRIM72, i.e., RING, B-box, coiled-coil, or PRY-SPRY, abolishes the physical interaction between TRIM72 and Cav1, suggesting that all theoretical domains of TRIM72 are required to forge a strong interaction between these two molecules. Moreover, in vivo studies showed that injurious ventilation-induced lung cell death was significantly increased in knockout (KO) TRIM72(KO) and Cav1(KO) lungs compared with wild-type controls and was particularly pronounced in double KO mutants. Apoptosis was accompanied by accentuation of gross lung injury manifestations in the TRIM72(KO) and Cav1(KO) mice. Our data show that TRIM72 directly and indirectly modulates caveolar endocytosis, an essential process involved in repair of lung epithelial cells through removal of plasma membrane wounds. Given TRIM72's role in endomembrane trafficking and cell repair, we consider this molecule an attractive therapeutic target for patients with injured lungs.

  3. TRIM proteins as trim tabs for the homoeostasis.

    PubMed

    Horie-Inoue, Kuniko

    2013-10-01

    The tripartite motif (TRIM) or RBCC proteins are characterized by the TRIM composed of a RING finger, B-box and coiled-coil domains. TRIM proteins often play roles in the post-translational protein modification, including ubiquitylation and other ubiquitin-like modifications. Evidence has accumulated in regard to the contribution of TRIM proteins to diverse cellular processes, including such as cell cycle progression, apoptosis, immunity and transcriptional regulation. In particular, some of the TRIM proteins have been characterized to exert oncogenic or tumour suppressor-like functions depending on the context. A recent report by Inoue and his colleagues has revealed that Terf/TRIM17 stimulates the degradation of a kinetochore protein ZWINT and regulates the proliferation of breast cancer cells. Terf has also been paid attention as a factor promoting neuronal apoptosis, by degrading a Bcl2-like anti-apoptotic protein Mcl-1. Like aircraft trim tabs, TRIM proteins trim the balance of homoeostasis by modulating various biological pathways through protein-protein interactions.

  4. 14 CFR 25.677 - Trim systems.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... clearly visible means to indicate the position of the trim device with respect to the range of adjustment. The indicator must be clearly marked with the range within which it has been demonstrated that takeoff... appropriately balanced and shown to be free from flutter. (d) If an irreversible tab control system is used,...

  5. Thermal trim for a luminaire

    DOEpatents

    Bazydola, Sarah; Ghiu, Camil-Daniel; Harrison, Robert; Jeswani, Anil

    2013-02-19

    A luminaire with a thermal pathway to reduce the junction temperature of the luminaire's light source, and methods for so doing, are disclosed. The luminaire includes a can, a light engine, and a trim, that define a substantially continuous thermal pathway from the light engine to a surrounding environment. The can defines a can cavity and includes a can end region. The light engine is within the can cavity and includes a light source and a heat sink, including a heat sink end region, coupled thereto. The trim is at least partially disposed within the can cavity and includes a first trim end region coupled to the heat sink end region and a second trim end region coupled to the can end region. Thermal interface material may be located between: the heat sink and the trim, the trim and the can, and/or the heat sink and the light source.

  6. Trim58 degrades dynein and regulates terminal erythropoiesis

    PubMed Central

    Thom, Christopher S; Traxler, Elizabeth A; Khandros, Eugene; Nickas, Jenna M; Zhou, Olivia Y; Lazarus, Jacob E; Silva, Ana PG; Prabhu, Dolly; Yao, Yu; Aribeana, Chiaka; Fuchs, Serge Y; Mackay, Joel P; Holzbaur, Erika LF; Weiss, Mitchell J

    2014-01-01

    SUMMARY TRIM58 is an E3 ubiquitin ligase superfamily member implicated by genome wide association studies (GWAS) to regulate human erythrocyte traits. Here we show that Trim58 expression is induced during late erythropoiesis and that its depletion by shRNAs inhibits the maturation of late stage nucleated erythroblasts to anucleate reticulocytes. Imaging flow cytometry studies demonstrate that Trim58 regulates polarization and/or extrusion of erythroblast nuclei. In vitro, Trim58 directly binds and ubiquitinates the intermediate chain of the microtubule motor dynein. In cells, Trim58 stimulates proteasome-dependent degradation of the dynein holoprotein complex. During erythropoiesis, Trim58 expression, dynein loss and enucleation occur concomitantly and all are inhibited by Trim58 shRNAs. Dynein regulates nuclear positioning and microtubule organization, both of which undergo dramatic changes during erythroblast enucleation. Thus, we propose that Trim58 regulates this process by eliminating dynein. Our findings identify an erythroid-specific regulator of enucleation and elucidate a previously unrecognized mechanism for controlling dynein activity. PMID:25241935

  7. Trim58 degrades Dynein and regulates terminal erythropoiesis.

    PubMed

    Thom, Christopher S; Traxler, Elizabeth A; Khandros, Eugene; Nickas, Jenna M; Zhou, Olivia Y; Lazarus, Jacob E; Silva, Ana P G; Prabhu, Dolly; Yao, Yu; Aribeana, Chiaka; Fuchs, Serge Y; Mackay, Joel P; Holzbaur, Erika L F; Weiss, Mitchell J

    2014-09-29

    TRIM58 is an E3 ubiquitin ligase superfamily member implicated by genome-wide association studies to regulate human erythrocyte traits. Here, we show that Trim58 expression is induced during late erythropoiesis and that its depletion by small hairpin RNAs (shRNAs) inhibits the maturation of late-stage nucleated erythroblasts to anucleate reticulocytes. Imaging flow cytometry studies demonstrate that Trim58 regulates polarization and/or extrusion of erythroblast nuclei. In vitro, Trim58 directly binds and ubiquitinates the intermediate chain of the microtubule motor dynein. In cells, Trim58 stimulates proteasome-dependent degradation of the dynein holoprotein complex. During erythropoiesis, Trim58 expression, dynein loss, and enucleation occur concomitantly, and all are inhibited by Trim58 shRNAs. Dynein regulates nuclear positioning and microtubule organization, both of which undergo dramatic changes during erythroblast enucleation. Thus, we propose that Trim58 promotes this process by eliminating dynein. Our findings identify an erythroid-specific regulator of enucleation and elucidate a previously unrecognized mechanism for controlling dynein activity.

  8. Compensation of the AKT signaling by ERK signaling in transgenic mice hearts overexpressing TRIM72

    SciTech Connect

    Ham, Young-Mi; Mahoney, Sarah Jane

    2013-06-10

    The AKT and ERK signaling pathways are known to be involved in cell hypertrophy, proliferation, survival and differentiation. Although there is evidence for crosstalk between these two signaling pathways in cellulo, there is less evidence for cross talk in vivo. Here, we show that crosstalk between AKT and ERK signaling in the hearts of TRIM72-overexpressing transgenic mice (TRIM72-Tg) with alpha-MHC promoter regulates and maintains their heart size. TRIM72, a heart- and skeletal muscle-specific protein, downregulates AKT-mTOR signaling via IRS-1 degradation and reduces the size of rat cardiomyocytes and the size of postnatal TRIM72-Tg hearts. TRIM72 expression was upregulated by hypertrophic inducers in cardiomyocytes, while IRS-1 was downregulated by IGF-1. TRIM72 specifically regulated IGF-1-dependent AKT-mTOR signaling, resulting in a reduction of the size of cardiomyocytes. Postnatal TRIM72-Tg hearts were smaller than control-treated hearts with inhibition of AKT-mTOR signaling. However, adult TRIM72-Tg hearts were larger than of control despite the suppression of AKT-mTOR signaling. Activation of ERK, PKC-α, and JNK were observed to be elevated in adult TRIM72-Tg, and these signals were mediated by ET-1 via the ET receptors A and B. Altogether, these results suggest that AKT signaling regulates cardiac hypertrophy in physiological conditions, and ERK signaling compensates for the absence of AKT signaling during TRIM72 overexpression, leading to pathological hypertrophy. -- Highlights: • TRIM72 inhibits AKT signaling through ubiquitination of IRS-1 in cardiac cells. • TRIM72 regulates the size of cardiac cells. • TRIM72 regulates size of postnatal TRIM72-overexpressing transgenic mice hearts. • Adult TRIM72-overexpressing transgenic mice hearts showed cardiac dysfunction. • Adult TRIM72 transgenic mice hearts showed higher expression of endothelin receptors.

  9. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    Lawrence E. Bool; Jack C. Chen; David R. Thompson

    2000-07-01

    Increased environmental regulations will require utility boilers to reduce NO{sub x} emissions to less than 0.15lb/MMBtu in the near term. Conventional technologies such as Selective Catalytic Reduction (SCR) and Selective Non-Catalytic Reduction (SNCR) are unable to achieve these lowered emission levels without substantially higher costs and major operating problems. Oxygen enhanced combustion is a novel technology that allows utilities to meet the NO{sub x} emission requirements without the operational problems that occur with SCR and SNCR. Furthermore, oxygen enhanced combustion can achieve these NO{sub x} limits at costs lower than conventional technologies. The objective of this program is to demonstrate the use of oxygen enhanced combustion as a technical and economical method of meeting the EPA State Implementation Plan for NO{sub x} reduction to less than 0.15lb/MMBtu for a wide range of boilers and coal. The oxygen enhanced coal combustion program (Task 1) focused this quarter on the specific objective of exploration of the impact of oxygen enrichment on NO{sub x} formation utilizing small-scale combustors for parametric testing. Research efforts toward understanding any limitations to the applicability of the technology to different burners and fuels such as different types of coal are underway. The objective of the oxygen transport membrane (OTM) materials development program (Task 2.1) is to ascertain a suitable material composition that can be fabricated into dense tubes capable of producing the target oxygen flux under the operating conditions. This requires that the material have sufficient oxygen permeation resulting from high oxygen ion conductivity, high electronic conductivity and high oxygen surface exchange rate. The OTM element development program (Task 2.2) objective is to develop, fabricate and characterize OTM elements for laboratory and pilot reactors utilizing quality control parameters to ensure reproducibility and superior performance

  10. Novel function of Trim44 promotes an antiviral response by stabilizing VISA.

    PubMed

    Yang, Bo; Wang, Jie; Wang, Yanming; Zhou, Haiyan; Wu, Xiaodong; Tian, Zhigang; Sun, Bing

    2013-04-01

    Virus-induced signaling adaptor (VISA) functions as a critical adaptor in the regulation of both the production of type I IFNs and the subsequent control of the innate antiviral response. In this study, we demonstrate that tripartite motif (Trim)44 interacts with VISA and promotes VISA-mediated antiviral responses. The overexpression of Trim44 enhances the cellular response to viral infection, whereas Trim44 knockdown yields the opposite effect. Trim44 stabilizes VISA by preventing VISA ubiquitination and degradation. These findings suggest that Trim44 functions as a positive regulator of the virus-triggered immune response by enhancing the stability of VISA.

  11. The TRIM-NHL Protein LIN-41 and the OMA RNA-Binding Proteins Antagonistically Control the Prophase-to-Metaphase Transition and Growth of Caenorhabditis elegans Oocytes

    PubMed Central

    Spike, Caroline A.; Coetzee, Donna; Eichten, Carly; Wang, Xin; Hansen, Dave; Greenstein, David

    2014-01-01

    In many animals, oocytes enter meiosis early in their development but arrest in meiotic prophase I. Oocyte growth, which occurs during this arrest period, enables the acquisition of meiotic competence and the capacity to produce healthy progeny. Meiotic resumption, or meiotic maturation, involves the transition to metaphase I (M phase) and is regulated by intercellular signaling and cyclin-dependent kinase activation. Premature meiotic maturation would be predicted to diminish fertility as the timing of this event, which normally occurs after oocyte growth is complete, is crucial. In the accompanying article in this issue, we identify the highly conserved TRIM-NHL protein LIN-41 as a translational repressor that copurifies with OMA-1 and OMA-2, RNA-binding proteins redundantly required for normal oocyte growth and meiotic maturation. In this article, we show that LIN-41 enables the production of high-quality oocytes and plays an essential role in controlling and coordinating oocyte growth and meiotic maturation. lin-41 null mutants display a striking defect that is specific to oogenesis: pachytene-stage cells cellularize prematurely and fail to progress to diplotene. Instead, these cells activate CDK-1, enter M phase, assemble spindles, and attempt to segregate chromosomes. Translational derepression of the CDK-1 activator CDC-25.3 appears to contribute to premature M-phase entry in lin-41 mutant oocytes. Genetic and phenotypic analyses indicate that LIN-41 and OMA-1/2 exhibit an antagonistic relationship, and we suggest that translational regulation by these proteins could be important for controlling and coordinating oocyte growth and meiotic maturation. PMID:25261698

  12. The TRIM-NHL protein LIN-41 and the OMA RNA-binding proteins antagonistically control the prophase-to-metaphase transition and growth of Caenorhabditis elegans oocytes.

    PubMed

    Spike, Caroline A; Coetzee, Donna; Eichten, Carly; Wang, Xin; Hansen, Dave; Greenstein, David

    2014-12-01

    In many animals, oocytes enter meiosis early in their development but arrest in meiotic prophase I. Oocyte growth, which occurs during this arrest period, enables the acquisition of meiotic competence and the capacity to produce healthy progeny. Meiotic resumption, or meiotic maturation, involves the transition to metaphase I (M phase) and is regulated by intercellular signaling and cyclin-dependent kinase activation. Premature meiotic maturation would be predicted to diminish fertility as the timing of this event, which normally occurs after oocyte growth is complete, is crucial. In the accompanying article in this issue, we identify the highly conserved TRIM-NHL protein LIN-41 as a translational repressor that copurifies with OMA-1 and OMA-2, RNA-binding proteins redundantly required for normal oocyte growth and meiotic maturation. In this article, we show that LIN-41 enables the production of high-quality oocytes and plays an essential role in controlling and coordinating oocyte growth and meiotic maturation. lin-41 null mutants display a striking defect that is specific to oogenesis: pachytene-stage cells cellularize prematurely and fail to progress to diplotene. Instead, these cells activate CDK-1, enter M phase, assemble spindles, and attempt to segregate chromosomes. Translational derepression of the CDK-1 activator CDC-25.3 appears to contribute to premature M-phase entry in lin-41 mutant oocytes. Genetic and phenotypic analyses indicate that LIN-41 and OMA-1/2 exhibit an antagonistic relationship, and we suggest that translational regulation by these proteins could be important for controlling and coordinating oocyte growth and meiotic maturation.

  13. The TRIM-NHL protein LIN-41 and the OMA RNA-binding proteins antagonistically control the prophase-to-metaphase transition and growth of Caenorhabditis elegans oocytes.

    PubMed

    Spike, Caroline A; Coetzee, Donna; Eichten, Carly; Wang, Xin; Hansen, Dave; Greenstein, David

    2014-12-01

    In many animals, oocytes enter meiosis early in their development but arrest in meiotic prophase I. Oocyte growth, which occurs during this arrest period, enables the acquisition of meiotic competence and the capacity to produce healthy progeny. Meiotic resumption, or meiotic maturation, involves the transition to metaphase I (M phase) and is regulated by intercellular signaling and cyclin-dependent kinase activation. Premature meiotic maturation would be predicted to diminish fertility as the timing of this event, which normally occurs after oocyte growth is complete, is crucial. In the accompanying article in this issue, we identify the highly conserved TRIM-NHL protein LIN-41 as a translational repressor that copurifies with OMA-1 and OMA-2, RNA-binding proteins redundantly required for normal oocyte growth and meiotic maturation. In this article, we show that LIN-41 enables the production of high-quality oocytes and plays an essential role in controlling and coordinating oocyte growth and meiotic maturation. lin-41 null mutants display a striking defect that is specific to oogenesis: pachytene-stage cells cellularize prematurely and fail to progress to diplotene. Instead, these cells activate CDK-1, enter M phase, assemble spindles, and attempt to segregate chromosomes. Translational derepression of the CDK-1 activator CDC-25.3 appears to contribute to premature M-phase entry in lin-41 mutant oocytes. Genetic and phenotypic analyses indicate that LIN-41 and OMA-1/2 exhibit an antagonistic relationship, and we suggest that translational regulation by these proteins could be important for controlling and coordinating oocyte growth and meiotic maturation. PMID:25261698

  14. A Viking satellite orbit trim strategy

    NASA Technical Reports Server (NTRS)

    Hintz, G. R.

    1971-01-01

    One strategy is submitted for meeting the varied and stringent requirements of the Viking Project on the control of the satellite orbit to obtain reconnaissance and to prepare for lander release. To satisfy these requirements, different orbit trim maneuver strategies were developed for two typical Viking missions. In addition, a summary of recent numerical results is included to show that this strategy satisfies the mission requirements which have been identified.

  15. Use of mild irradiation doses to control pathogenic bacteria on meat trimmings for production of patties aiming at provoking minimal changes in quality attributes.

    PubMed

    Xavier, Ma de la Paz; Dauber, Cecilia; Mussio, Paula; Delgado, Enrique; Maquieira, Ana; Soria, Alejandra; Curuchet, Ana; Márquez, Rosa; Méndez, Carlos; López, Tomás

    2014-11-01

    The objectives of the present work were to assess the use of moderate doses of gamma irradiation (2 to 5 kGy) and to reduce the risk of pathogen presence without altering the quality attributes of bovine trimmings and of patties made of irradiated trimmings. Microbiological indicators (coliforms, Pseudomonas spp and mesophilic aerobic counts), physicochemical indicators (pH, color and tiobarbituric acid) and sensory changes were evaluated during storage. 5 kGy irradiation doses slightly increased off flavors in patties. Two pathogenic markers (Listeria monocytogenes and Escherichia coli O157:H7) were inoculated at high or low loads to trimming samples which were subsequently irradiated and lethality curves were obtained. Provided that using irradiation doses ≤2.5 kGy are used, reductions of 2 log CFU/g of L. monocytogenes and 5 log CFU/g of E. coli O157:H7 are expected. It seems reasonable to suppose that irradiation can be successfully employed to improve the safety of frozen trimmings when initial pathogenic bacteria burdens are not extremely high. PMID:25042241

  16. Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control.

    PubMed

    Satoh, Tadashi; Toshimori, Takayasu; Yan, Gengwei; Yamaguchi, Takumi; Kato, Koichi

    2016-01-01

    The endoplasmic reticulum (ER) has a sophisticated protein quality control system for the efficient folding of newly synthesized proteins. In this system, a variety of N-linked oligosaccharides displayed on proteins serve as signals recognized by series of intracellular lectins. Glucosidase II catalyzes two-step hydrolysis at α1,3-linked glucose-glucose and glucose-mannose residues of high-mannose-type glycans to generate a quality control protein tag that is transiently expressed on glycoproteins and recognized by ER chaperones. Here we determined the crystal structures of the catalytic α subunit of glucosidase II (GIIα) complexed with two different glucosyl ligands containing the scissile bonds of first- and second-step reactions. Our structural data revealed that the nonreducing terminal disaccharide moieties of the two kinds of substrates can be accommodated in a gourd-shaped bilocular pocket, thereby providing a structural basis for substrate-binding specificity in the two-step deglucosylation catalyzed by this enzyme. PMID:26847925

  17. Structural basis for two-step glucose trimming by glucosidase II involved in ER glycoprotein quality control

    PubMed Central

    Satoh, Tadashi; Toshimori, Takayasu; Yan, Gengwei; Yamaguchi, Takumi; Kato, Koichi

    2016-01-01

    The endoplasmic reticulum (ER) has a sophisticated protein quality control system for the efficient folding of newly synthesized proteins. In this system, a variety of N-linked oligosaccharides displayed on proteins serve as signals recognized by series of intracellular lectins. Glucosidase II catalyzes two-step hydrolysis at α1,3-linked glucose–glucose and glucose–mannose residues of high-mannose-type glycans to generate a quality control protein tag that is transiently expressed on glycoproteins and recognized by ER chaperones. Here we determined the crystal structures of the catalytic α subunit of glucosidase II (GIIα) complexed with two different glucosyl ligands containing the scissile bonds of first- and second-step reactions. Our structural data revealed that the nonreducing terminal disaccharide moieties of the two kinds of substrates can be accommodated in a gourd-shaped bilocular pocket, thereby providing a structural basis for substrate-binding specificity in the two-step deglucosylation catalyzed by this enzyme. PMID:26847925

  18. Functional Laser Trimming Of Thin Film Resistors On Silicon ICs

    NASA Astrophysics Data System (ADS)

    Mueller, Michael J.; Mickanin, Wes

    1986-07-01

    Modern Laser Wafer Trimming (LWT) technology achieves exceptional analog circuit performance and precision while maintain-ing the advantages of high production throughput and yield. Microprocessor-driven instrumentation has both emphasized the role of data conversion circuits and demanded sophisticated signal conditioning functions. Advanced analog semiconductor circuits with bandwidths over 1 GHz, and high precision, trimmable, thin-film resistors meet many of todays emerging circuit requirements. Critical to meeting these requirements are optimum choices of laser characteristics, proper materials, trimming process control, accurate modeling of trimmed resistor performance, and appropriate circuit design. Once limited exclusively to hand-crafted, custom integrated circuits, designs are now available in semi-custom circuit configurations. These are similar to those provided for digital designs and supported by computer-aided design (CAD) tools. Integrated with fully automated measurement and trimming systems, these quality circuits can now be produced in quantity to meet the requirements of communications, instrumentation, and signal processing markets.

  19. 114. WEST SIDE OF LIQUID OXYGEN CONTROL ROOM (205). LIQUID ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    114. WEST SIDE OF LIQUID OXYGEN CONTROL ROOM (205). LIQUID NITROGEN (LN2) SUBCOOLER ON LEFT; SKID 8, LIQUID OXYGEN CONTROLLER FOR SWITCHING BETWEEN RAPID-LOAD AND TOPPING ON RIGHT. LIQUID OXYGEN LINE FROM SKID 9A AT RIGHT EDGE OF PHOTO. - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 East, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

  20. Trim43a, Trim43b, and Trim43c: Novel mouse genes expressed specifically in mouse preimplantation embryos.

    PubMed

    Stanghellini, Ilaria; Falco, Geppino; Lee, Sung-Lim; Monti, Manuela; Ko, Minoru S H

    2009-12-01

    We describe the identification and characterization of Trim43a, Trim43b, and Trim43c genes, whose expression are restricted to preimplantation stages and peak at the 8-cell to morula stage. We identified a 5kb DNA fragment that covers upstream region of Trim43a as a putative promoter, which can drive the expression of mStrawberry fluorescent protein in a manner similar to endogenous Trim43 genes. Trim43 genes will be useful stage-specific markers for the study of preimplantation embryos.

  1. Empirical Likelihood-Based ANOVA for Trimmed Means

    PubMed Central

    Velina, Mara; Valeinis, Janis; Greco, Luca; Luta, George

    2016-01-01

    In this paper, we introduce an alternative to Yuen’s test for the comparison of several population trimmed means. This nonparametric ANOVA type test is based on the empirical likelihood (EL) approach and extends the results for one population trimmed mean from Qin and Tsao (2002). The results of our simulation study indicate that for skewed distributions, with and without variance heterogeneity, Yuen’s test performs better than the new EL ANOVA test for trimmed means with respect to control over the probability of a type I error. This finding is in contrast with our simulation results for the comparison of means, where the EL ANOVA test for means performs better than Welch’s heteroscedastic F test. The analysis of a real data example illustrates the use of Yuen’s test and the new EL ANOVA test for trimmed means for different trimming levels. Based on the results of our study, we recommend the use of Yuen’s test for situations involving the comparison of population trimmed means between groups of interest. PMID:27690063

  2. Tinning/Trimming Robot System

    SciTech Connect

    Fureigh, M.L.

    1993-02-01

    In a new surface mount assembly area at AlliedSignal Inc., Kansas City Division (KCD), a tinning/trimming robot system tins and trims the gold-plated leads of surface mount technology (SMT) transistors. The KCD-designed system uses a Unimation PUMA 260 robot, a General Production Devices SP-2000 solder pot; water-soluble Blackstone No. 2508 flux; and a Virtual Industries high-temperature, ESD-conductive, miniature suction cup. After the manual cleaning operation, the processed SMT transistors go to the QUADSTAR Automated Component Placement System for a Radar Logic Assembly. The benefits are reductions in the cost of nonconformance, worker fatigue, and standard hours.

  3. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2001-04-01

    This quarterly technical progress report will summarize work accomplished for the Program through the fourth quarter January-March 2001 in the following task areas: Task 1 - Oxygen Enhanced Combustion, Task 2 - Oxygen Transport Membranes and Task 4 - Program Management. This report will also recap the results of the past year. The program is proceeding in accordance with the objectives for the first year. OTM material characterization was completed. 100% of commercial target flux was demonstrated with OTM disks. The design and assembly of Praxair's single tube high-pressure test facility was completed. The production of oxygen with a purity of better than 99.5% was demonstrated. Coal combustion testing was conducted at the University of Arizona. Modest oxygen enhancement resulted in NOx emissions reduction. The injector for oxygen enhanced coal based reburning was conducted at Praxair. Combustion modeling with Keystone boiler was completed. Pilot-scale combustion test furnace simulations continued this quarter.

  4. 14 CFR 25.161 - Trim.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... conditions of operation (including operation at any speed from 1.3 V SR 1 to V MO/MMO). (c) Longitudinal trim. The airplane must maintain longitudinal trim during— (1) A climb with maximum continuous power at a... landing gear extended. (d) Longitudinal, directional, and lateral trim. The airplane must...

  5. Oxygen-depleted zones inside reproductive structures of Brassicaceae: implications for oxygen control of seed development.

    PubMed

    Porterfield, D M; Kuang, A; Smith, P J; Crispi, M L; Musgrave, M E

    1999-10-01

    Growth of Arabidopsis thaliana (L.) Heynh. in decreasing oxygen partial pressures revealed a linear decrease in seed production below 15 kPa, with a complete absence of seed production at 2.5 kPa oxygen. This control of plant reproduction by oxygen had previously been attributed to an oxygen effect on the partitioning between vegetative and reproductive growth. However, plants grown in a series of decreasing oxygen concentrations produced progressively smaller embryos that had stopped developing at progressively younger stages, suggesting instead that their growth is limited by oxygen. Internal oxygen concentrations of buds, pistils, and developing siliques of Brassica rapa L. and siliques of Arabidopsis were measured using a small-diameter glass electrode that was moved into the structures using a micromanipulator. Oxygen partial pressures were found to be lowest in the developing perianth (11.1 kPa) and pistils (15.2 kPa) of the unopened buds. Pollination reduced oxygen concentration inside the pistils by 3 kPa after just 24 h. Inside Brassica silique locules, partial pressures of oxygen averaged 12.2 kPa in darkness, and increased linearly with increasing light levels to 16.2 kPa. Measurements inside Arabidopsis siliques averaged 6.1 kPa in the dark and rose to 12.2 kPa with light. Hypoxia in these microenvironments is postulated to be the point of control of plant reproduction by oxygen.

  6. Oxygen-depleted zones inside reproductive structures of Brassicaceae: implications for oxygen control of seed development

    NASA Technical Reports Server (NTRS)

    Porterfield, D. M.; Kuang, A.; Smith, P. J.; Crispi, M. L.; Musgrave, M. E.

    1999-01-01

    Growth of Arabidopsis thaliana (L.) Heynh. in decreasing oxygen partial pressures revealed a linear decrease in seed production below 15 kPa, with a complete absence of seed production at 2.5 kPa oxygen. This control of plant reproduction by oxygen had previously been attributed to an oxygen effect on the partitioning between vegetative and reproductive growth. However, plants grown in a series of decreasing oxygen concentrations produced progressively smaller embryos that had stopped developing at progressively younger stages, suggesting instead that their growth is limited by oxygen. Internal oxygen concentrations of buds, pistils, and developing siliques of Brassica rapa L. and siliques of Arabidopsis were measured using a small-diameter glass electrode that was moved into the structures using a micromanipulator. Oxygen partial pressures were found to be lowest in the developing perianth (11.1 kPa) and pistils (15.2 kPa) of the unopened buds. Pollination reduced oxygen concentration inside the pistils by 3 kPa after just 24 h. Inside Brassica silique locules, partial pressures of oxygen averaged 12.2 kPa in darkness, and increased linearly with increasing light levels to 16.2 kPa. Measurements inside Arabidopsis siliques averaged 6.1 kPa in the dark and rose to 12.2 kPa with light. Hypoxia in these microenvironments is postulated to be the point of control of plant reproduction by oxygen.

  7. Estimating and controlling the atomic oxygen content in an argon-oxygen plasma

    NASA Astrophysics Data System (ADS)

    Keville, Bernard; Monahan, Derek D.; Turner, Miles M.

    2008-10-01

    Oxygen rich plasmas have been applied in many plasma processing applications for decades. In most such applications, process yield could be improved significantly by applying closed loop control of atomic oxygen radical concentration. The design of effective, real time, closed loop control algorithms is facilitated by simple dynamical models of the relationship between inputs, or actuators in control terminology, and the process quantities to be controlled. In the case of an oxygen rich plasma process, one requires the relationship between the inputs - flow-rate set points, forward power from the RF supply and residence time, for example - and the oxygen radical density. With the aid of an argon-oxygen plasma simulation, this presentation describes how, with the aid of simplified dynamical models of the process, one would design model-based control algorithms for the real-time, closed loop control of oxygen radical density. A sine qua non of real time, closed loop control is an accurate estimate of the process quantities to be controlled. Although actinometry provides a non-invasive method for estimating species densities, atomic oxygen actinometry is complicated by the fact that photon emission can occur through dissociative as well as direct excitation, leading to potential ambiguity between the emission intensity and the actual radical concentration in the plasma. Optimal estimation of process states given indirect measurements corrupted by process and measurement noise is a classical topic in control theory and has yielded some spectacular results, notably the ubiquitous Kalman filter.

  8. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2003-08-01

    This quarterly technical progress report will summarize work accomplished for the Program through the thirteenth quarter, April-June 2003, in the following task areas: Task 1--Oxygen Enhanced Combustion, Task 3--Economic Evaluation and Task 4--Program Management. The program is proceeding in accordance with project objectives. REI's model was modified to evaluate mixing issues in the upper furnace of a staged unit. Analysis of the results, and their potential application to this unit is ongoing. Economic evaluation continues to confirm the advantage of oxygen-enhanced combustion. A contract for a commercial demonstration has been signed with the Northeast Generation Services Company to supply oxygen and license the oxygen enhanced low NOx combustor technology for use at the 147-megawatt coal fired Mt. Tom Station in Holyoke, MA. Commercial proposals have been submitted. Economic analysis of a beta site test performance was conducted.

  9. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2002-04-01

    This quarterly technical progress report will summarize work accomplished for the Program through the fourth quarter January-March 2002 in the following task areas: Task 1--Oxygen Enhanced Combustion, Task 2--Oxygen Transport Membranes, Task 3--Economic Evaluation and Task 4--Program Management. This report will also recap the results of the past year. The program is proceeding in accordance with the objectives for the second year. The first round of pilot scale testing with 3 bituminous coals was completed at the University of Utah. Full-scale testing equipment is in place and experiments are underway. Coal combustion lab-scale testing was completed at the University of Arizona. Modest oxygen enhancement resulted in NOx emissions reduction. Combustion modeling activities continued with pilot-scale combustion test furnace simulations. 75% of target oxygen flux was demonstrated with small PSO1 tube in Praxair's single tube high-pressure test facility. The production of oxygen with a purity of better than 99.999% was demonstrated. Economic evaluation has confirmed the advantage of oxygen-enhanced combustion. Two potential host sites have been identified.

  10. TRIM-mediated precision autophagy targets cytoplasmic regulators of innate immunity

    PubMed Central

    Kimura, Tomonori; Jain, Ashish; Choi, Seong Won; Mandell, Michael A.; Schroder, Kate; Johansen, Terje

    2015-01-01

    The present paradigms of selective autophagy in mammalian cells cannot fully explain the specificity and selectivity of autophagic degradation. In this paper, we report that a subset of tripartite motif (TRIM) proteins act as specialized receptors for highly specific autophagy (precision autophagy) of key components of the inflammasome and type I interferon response systems. TRIM20 targets the inflammasome components, including NLRP3, NLRP1, and pro–caspase 1, for autophagic degradation, whereas TRIM21 targets IRF3. TRIM20 and TRIM21 directly bind their respective cargo and recruit autophagic machinery to execute degradation. The autophagic function of TRIM20 is affected by mutations associated with familial Mediterranean fever. These findings broaden the concept of TRIMs acting as autophagic receptor regulators executing precision autophagy of specific cytoplasmic targets. In the case of TRIM20 and TRIM21, precision autophagy controls the hub signaling machineries and key factors, inflammasome and type I interferon, directing cardinal innate immunity response systems in humans. PMID:26347139

  11. 14 CFR 25.255 - Out-of-trim characteristics.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... of— (1) A three-second movement of the longitudinal trim system at its normal rate for the particular.../MFC and VDF/MDF the direction of the primary longitudinal control force may not reverse. (c) Except as... flight test with regard to reversal of primary longitudinal control force, flight tests must...

  12. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2003-02-01

    This quarterly technical progress report will summarize work accomplished for the Program through the eleventh quarter, October-December 2002, in the following task areas: Task 1 - Oxygen Enhanced Combustion, Task 2 - Oxygen Transport Membranes, Task 3 - Economic Evaluation and Task 4 - Program Management. The program is proceeding in accordance with the objectives for the third year. Pilot scale experiments conducted at the University of Utah were aimed at confirming the importance of oxygen injection strategy for different types of burners. CFD modeling at REI was used to better understand the potential for increased corrosion under oxygen enhanced combustion conditions. Data from a full-scale demonstration test in Springfield, MO were analyzed. OTM element development continued with preliminary investigation of an alternative method of fabrication of PSO1d elements. OTM process development continued with long-term testing of a PSO1d element. Economic evaluation has confirmed the advantage of oxygen-enhanced combustion. Proposals have been submitted for two additional beta test sites. A first commercial proposal has been submitted. Economic analysis of a beta site test performance was conducted.

  13. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2003-04-01

    This quarterly technical progress report will summarize work accomplished for the Program through the twelfth quarter, January-March 2003, in the following task areas: Task 1--Oxygen Enhanced Combustion, Task 2--Oxygen Transport Membranes, Task 3--Economic Evaluation and Task 4--Program Management. The program is proceeding in accordance with the objectives for the third year. Pilot scale experiments conducted at the University of Utah explored both the effectiveness of oxygen addition and the best way to add oxygen with a scaled version of Riley Power's newest low NOx burner design. CFD modeling was done to compare the REI's modeling results for James River Unit 3 with the NOx and LOI results obtained during the demonstration program at that facility. Investigation of an alternative method of fabrication of PSO1d elements was conducted. OTM process development work has concluded with the completion of a long-term test of a PSO1d element Economic evaluation has confirmed the advantage of oxygen-enhanced combustion. Proposals have been submitted for two additional beta test sites. Commercial proposals have been submitted. Economic analysis of a beta site test performance was conducted.

  14. Supersonic Aerodynamic Characteristics of Blunt Body Trim Tab Configurations

    NASA Technical Reports Server (NTRS)

    Korzun, Ashley M.; Murphy, Kelly J.; Edquist, Karl T.

    2013-01-01

    Trim tabs are aerodynamic control surfaces that can allow an entry vehicle to meet aerodynamic performance requirements while reducing or eliminating the use of ballast mass and providing a capability to modulate the lift-to-drag ratio during entry. Force and moment data were obtained on 38 unique, blunt body trim tab configurations in the NASA Langley Research Center Unitary Plan Wind Tunnel. The data were used to parametrically assess the supersonic aerodynamic performance of trim tabs and to understand the influence of tab area, cant angle, and aspect ratio. Across the range of conditions tested (Mach numbers of 2.5, 3.5, and 4.5; angles of attack from -4deg to +20deg; angles of sideslip from 0deg to +8deg), the effects of varying tab area and tab cant angle were found to be much more significant than effects from varying tab aspect ratio. Aerodynamic characteristics exhibited variation with Mach number and forebody geometry over the range of conditions tested. Overall, the results demonstrate that trim tabs are a viable approach to satisfy aerodynamic performance requirements of blunt body entry vehicles with minimal ballast mass. For a 70deg sphere-cone, a tab with 3% area of the forebody and canted approximately 35deg with no ballast mass was found to give the same trim aerodynamics as a baseline model with ballast mass that was 5% of the total entry mass.

  15. Cycle time control of an onboard oxygen generation system.

    PubMed

    Beaman, J J; Wang, S Y; Masada, G Y

    1987-12-01

    The outlet oxygen concentration of an onboard oxygen generation system (OBOGS) is controlled in this study by varying the cycle time of a pressure swing adsorption process. The control of the oxygen concentration is highly desirable since both high and low concentrations of oxygen can cause physiological problems. This cycle time control method can be easily implemented using a DC motor and a simple electronic controller. The physiological requirements recommended for high-performance tactical aircraft can be met by this method with either an open-loop or closed-loop configuration. The open-loop configuration requires the measurement of crew breathing flowrate and cabin pressure. The closed-loop configuration requires an additional measurement of oxygen concentration, but it has the advantage of being more adaptive to system variability during setup and operation. The method in either configuration requires very little adjustment and setup time in order to meet the specifications.

  16. Factors affecting laser-trim stability of thick film resistors

    NASA Technical Reports Server (NTRS)

    Cote, R. E.; Headley, R. C.

    1977-01-01

    Various factors affecting precision of trim and resistor stability were considered. The influence of machine operating parameters on resistor performance was examined and quantified through statistically designed experiments for a Q switched YAG laser system. Laser kerf quality was studied by scanning electron microscopy and related to kerf isolation resistance measurements. A relatively simple production oriented, quality control test is proposed for rapid determination of kerf electrical stability. In addition, the effect of cut design and extent of trim on precision and stability were discussed.

  17. Noise Reduction in an Aircraft Fuselage Model Using Active Trim Panels

    NASA Technical Reports Server (NTRS)

    Silcox, Richard J.; Lyle, Karen H.

    1996-01-01

    An experiment was conducted to evaluate the use of force actuators on a model aircraft interior trim panel as the control element for active control of interior noise. The trim panel, designed specifically for this study, was constructed in three large identical sections and hard mounted to the ring frames of the primary structure. Piezoceramic actuators were bonded to the outer surface of the trim panels. Studies of the interior pressure response due to both the primary source alone and control sources alone were conducted as well as the control cases. A single acoustic loudspeaker, centered at the axial midpoint, generated the acoustic field to be controlled.

  18. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    Lawrence E. Bool; Jack C. Chen; David R. Thompson

    2000-10-01

    This quarterly technical progress report will summarize work accomplished for the Program through the second quarter July--September 2000 in the following task areas: Task 1-Oxygen Enhanced Combustion, Task 2-Oxygen Transport Membranes and Task 4-Program Management. The program is proceeding in accordance with the objectives for the first year. OTM tube characterization is well underway, the design and assembly of the high pressure permeation test facility is complete and the facility will be in full operation during the next quarter. Combustion testing has been initiated at both the University of Arizona and Praxair. Testing at the University of Arizona has experienced some delays; steps have been take to get the test work back on schedule. Completion of the first phase of the testing is expected in next quarter. Combustion modeling has been started at both REI and Praxair, preliminary results are expected in the next quarter.

  19. OXYGEN ENHANCED COMBUSTION FOR NOx CONTROL

    SciTech Connect

    David R. Thompson; Lawrence E. Bool; Jack C. Chen

    2002-08-01

    This quarterly technical progress report will summarize work accomplished for the Program through the ninth quarter April-June 2002 in the following task areas: Task 1--Oxygen Enhanced Combustion, Task 2--Oxygen Transport Membranes, Task 3--Economic Evaluation and Task 4--Program Management. The program is proceeding in accordance with the objectives for the third year. Full-scale testing using the Industrial Boiler Simulation Facility (ISBF) at Alstom Power was completed. The pilot scale experiments to evaluate the effect of air preheat and transport air stoichiometric ratio (SR) on NOx emissions were conducted at the University of Utah. Combustion modeling activities continued with full-scale combustion test furnace simulations. An OTM element was tested in Praxair's single tube high-pressure test facility and two thermal cycles were completed. PSO1d elements of new dimension were tested resulting in a lower flux than previous PSO1d elements of different dimensions, however, no element deformation was observed. Economic evaluation has confirmed the advantage of oxygen-enhanced combustion. Two potential host beta sites have been identified and proposals submitted.

  20. TRIM25 has a dual function in the p53/Mdm2 circuit.

    PubMed

    Zhang, P; Elabd, S; Hammer, S; Solozobova, V; Yan, H; Bartel, F; Inoue, S; Henrich, T; Wittbrodt, J; Loosli, F; Davidson, G; Blattner, C

    2015-11-12

    P53 is an important tumor suppressor that, upon activation, induces growth arrest and cell death. Control of p53 is thus of prime importance for proliferating cells, but also for cancer therapy, where p53 activity contributes to the eradication of tumors. Mdm2 functionally inhibits p53 and targets the tumor suppressor protein for degradation. In a genetic screen, we identified TRIM25 as a novel regulator of p53 and Mdm2. TRIM25 increased p53 and Mdm2 abundance by inhibiting their ubiquitination and degradation in 26 S proteasomes. TRIM25 co-precipitated with p53 and Mdm2 and interfered with the association of p300 and Mdm2, a critical step for p53 polyubiquitination. Despite the increase in p53 levels, p53 activity was inhibited in the presence of TRIM25. Downregulation of TRIM25 resulted in an increased acetylation of p53 and p53-dependent cell death in HCT116 cells. Upon genotoxic insults, TRIM25 dampened the p53-dependent DNA damage response. The downregulation of TRIM25 furthermore resulted in massive apoptosis during early embryogenesis of medaka, which was rescued by the concomitant downregulation of p53, demonstrating the functional relevance of the regulation of p53 by TRIM25 in an organismal context. PMID:25728675

  1. Strain control of oxygen vacancies in epitaxial strontium cobaltite films

    DOE PAGESBeta

    Jeen, Hyoung Jeen; Choi, Woo Seok; Reboredo, Fernando A.; Freeland, John W.; Eres, Gyula; Lee, Ho Nyung; Petrie, Jonathan R.; Mitra, Chandrima; Meyer, Tricia L.

    2016-01-25

    In this study, the ability to manipulate oxygen anion defects rather than metal cations in complex oxides can facilitate creating new functionalities critical for emerging energy and device technologies. However, the difficulty in activating oxygen at reduced temperatures hinders the deliberate control of important defects, oxygen vacancies. Here, strontium cobaltite (SrCoOx) is used to demonstrate that epitaxial strain is a powerful tool for manipulating the oxygen vacancy concentration even under highly oxidizing environments and at annealing temperatures as low as 300 °C. By applying a small biaxial tensile strain (2%), the oxygen activation energy barrier decreases by ≈30%, resulting inmore » a tunable oxygen deficient steady-state under conditions that would normally fully oxidize unstrained cobaltite. These strain-induced changes in oxygen stoichiometry drive the cobaltite from a ferromagnetic metal towards an antiferromagnetic insulator. The ability to decouple the oxygen vacancy concentration from its typical dependence on the operational environment is useful for effectively designing oxides materials with a specific oxygen stoichiometry.« less

  2. Automation and control of off-planet oxygen production processes

    NASA Technical Reports Server (NTRS)

    Marner, W. J.; Suitor, J. W.; Schooley, L. S.; Cellier, F. E.

    1990-01-01

    This paper addresses several aspects of the automation and control of off-planet production processes. First, a general approach to process automation and control is discussed from the viewpoint of translating human process control procedures into automated procedures. Second, the control issues for the automation and control of off-planet oxygen processes are discussed. Sensors, instruments, and components are defined and discussed in the context of off-planet applications, and the need for 'smart' components is clearly established.

  3. Oxygen atom density and thermal energy control in an electric-oxygen iodine laser

    NASA Astrophysics Data System (ADS)

    Benavides, G. F.; Palla, A. D.; Zimmerman, J. W.; Woodard, B. S.; Carroll, D. L.; Solomon, W. C.

    2014-02-01

    Experiments[1] with Electric Oxygen-Iodine Laser (ElectricOIL) heat exchanger technology have demonstrated improved control of oxygen atom density and thermal energy, with minimal quenching of O2(a1Δ), and increasing small signal gain from 0.26% cm-1 to 0.30% cm-1. Heat exchanger technological improvements were achieved through both experimental and modeling studies, including estimation of O2(a1Δ) surface quenching coefficients for select ElectricOIL materials downstream of a radio-frequency discharge-driven singlet oxygen generator. Estimation of O2(a1Δ) quenching coefficients is differentiated from previous studies by inclusion of oxygen atoms, historically scrubbed using HgO[2-4] or AgO[5]. High-fidelity, time-dependent and steady-state simulations are presented using the new BLAZE-VI multi-physics simulation suite[6] and compared to data.

  4. 142. STANDBY PRESSURE CONTROL UNIT FOR FUEL AND LIQUID OXYGEN ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    142. STANDBY PRESSURE CONTROL UNIT FOR FUEL AND LIQUID OXYGEN IN SOUTHWEST PORTION OF CONTROL ROOM (214), LSB (BLDG. 751), FACING WEST - Vandenberg Air Force Base, Space Launch Complex 3, Launch Pad 3 East, Napa & Alden Roads, Lompoc, Santa Barbara County, CA

  5. Atmospheric oxygen concentration controls the size history of foraminifers

    NASA Astrophysics Data System (ADS)

    Payne, J.; Jost, A. B.; Ouyang, X.; Skotheim, J. M.; Wang, S. C.

    2010-12-01

    Body size correlates with numerous physiological traits and thus influences organism fitness. However, long-term controls on size evolution remain poorly understood because few datasets spans sufficiently long intervals. One proposed controlling factor is variation in atmospheric oxygen, which is widely argued to have influenced size evolution in numerous taxa, notably gigantism in arthropods during the late Paleozoic. In this study, we compiled a comprehensive genus- and species-level size database of foraminifers (marine protists) to enable an extensive analysis of factors influencing size evolution. Foraminifers are an ideal study group because they are present in all Phanerozoic periods and have been diverse and abundant in shallow-marine habitats since Devonian time. We observe significant correlation between foraminiferan size and atmospheric oxygen concentration in foraminifers as a whole and in half of the major subclades. Larger size is associated with higher oxygen concentrations, as predicted by simple physiological models based on changes in the ratio of surface area to volume. Because the oxygen content ocean waters is controlled in part by atmospheric pO2, we interpret the association between foraminiferan size and pO2 to result from a direct physiological effect of oxygen availability. Atmospheric oxygen concentration predicts foraminiferan size better than six other Phanerozoic time series (pCO2, sea level, number of named geological formations, δ18O, δ13C, 87Sr/86Sr), further suggesting the correlation between oxygen and size does not occur simply through some common geological cause that influences many aspects of Earth system history. These findings support the hypothesis that widespread Permo-Carboniferous gigantism was enabled by high pO2 and suggest that oxygen availability has been among the most important influences on size evolution through Phanerozoic time.

  6. Alterations in functional thalamocortical connectivity following neonatal whisker trimming with adult regrowth

    PubMed Central

    Carvell, G. E.; Kyriazi, H. T.

    2015-01-01

    Neonatal whisker trimming followed by adult whisker regrowth leads to higher responsiveness and altered receptive field properties of cortical neurons in corresponding layer 4 barrels. Studies of functional thalamocortical (TC) connectivity in normally reared adult rats have provided insights into how experience-dependent TC synaptic plasticity could impact the establishment of feedforward excitatory and inhibitory receptive fields. The present study employed cross-correlation analyses to investigate lasting effects of neonatal whisker trimming on functional connections between simultaneously recorded thalamic neurons and regular-spike (RS), presumed excitatory, and fast-spike (FS), presumed inhibitory, barrel neurons. We find that, as reported previously, RS and FS cells in whisker-trimmed animals fire more during the earliest phase of their whisker-evoked responses, corresponding to the arrival of TC inputs, despite a lack of change or even a slight decrease in the firing of thalamic cells that contact them. Functional connections from thalamus to cortex are stronger. The probability of finding TC-RS connections was twofold greater in trimmed animals and similar to the frequency of TC-FS connections in control and trimmed animals, the latter being unaffected by whisker trimming. Unlike control cases, trimmed RS units are more likely to receive inputs from TC units (TCUs) and have mismatched angular tuning and even weakly responsive TCUs make strong functional connections on them. Results indicate that developmentally appropriate tactile experience early in life promotes the differential thalamic engagement of excitatory and inhibitory cortical neurons that underlies normal barrel function. PMID:26245317

  7. Molecular Characterization, Tissue Distribution and Expression, and Potential Antiviral Effects of TRIM32 in the Common Carp (Cyprinus carpio)

    PubMed Central

    Wang, Yeda; Li, Zeming; Lu, Yuanan; Hu, Guangfu; Lin, Li; Zeng, Lingbing; Zhou, Yong; Liu, Xueqin

    2016-01-01

    Tripartite motif-containing protein 32 (TRIM32) belongs to the tripartite motif (TRIM) family, which consists of a large number of proteins containing a RING (Really Interesting New Gene) domain, one or two B-box domains, and coiled coil motif followed by different C-terminal domains. The TRIM family is known to be implicated in multiple cellular functions, including antiviral activity. However, it is presently unknown whether TRIM32 of common carp (Cyprinus carpio) has the antiviral effect. In this study, the sequence, expression, and antiviral function of TRIM32 homolog from common carp were analyzed. The full-length coding sequence region of trim32 was cloned from common carp. The results showed that the expression of TRIM32 (mRNA) was highest in the brain, remained stably expressed during embryonic development, and significantly increased following spring viraemia of carp virus (SVCV) infection. Transient overexpression of TRIM32 in affected Epithelioma papulosum cyprinid cells led to significant decrease of SVCV production as compared to the control group. These results suggested a potentially important role of common carp TRIM32 in enhancing host immune response during SVCV infection both in vivo and in vitro. PMID:27735853

  8. The Transcriptional Repressive Activity of KRAB Zinc Finger Proteins Does Not Correlate with Their Ability to Recruit TRIM28

    PubMed Central

    Murphy, Kristin E.; Shylo, Natalia A.; Alexander, Katherine A.; Churchill, Angela J.; Copperman, Cecilia; García-García, María J.

    2016-01-01

    KRAB domain Zinc finger proteins are one of the most abundant families of transcriptional regulators in higher vertebrates. The prevailing view is that KRAB domain proteins function as potent transcriptional repressors by recruiting TRIM28 and promoting heterochromatin spreading. However, the extent to which all KRAB domain proteins are TRIM28-dependent transcriptional repressors is currently unclear. Our studies on mouse ZFP568 revealed that TRIM28 recruitment by KRAB domain proteins is not sufficient to warrant transcriptional repressive activity. By using luciferase reporter assays and yeast two-hybrid experiments, we tested the ability of ZFP568 and other mouse KRAB domain proteins to repress transcription and bind TRIM28. We found that some mouse KRAB domain proteins are poor transcriptional repressors despite their ability to recruit TRIM28, while others showed strong KRAB-dependent transcriptional repression, but no TRIM28 binding. Together, our results show that the transcriptional repressive activity of KRAB-ZNF proteins does not correlate with their ability to recruit TRIM28, and provide evidence that KRAB domains can regulate transcription in a TRIM28-independent fashion. Our findings challenge the current understanding of the molecular mechanisms used by KRAB domain proteins to control gene expression and highlight that a high percentage of KRAB domain proteins in the mouse genome differ from the consensus KRAB sequence at amino acid residues that are critical for TRIM28 binding and/or repressive activity. PMID:27658112

  9. Compartment A1, trim tanks viewed aft to forward from watertight ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Compartment A-1, trim tanks viewed aft to forward from watertight bulkhead no. 6. Using remotely controlled valves, the tanks could be flooded with water or pumped clear to compensate for variations in the ship's displacement and maintain the water line at the desired point. The trim tanks could also be used to counteract the effect of variations in sea water density. (02) - USS Olympia, Penn's Landing, 211 South Columbus Boulevard, Philadelphia, Philadelphia County, PA

  10. Control of seed development in Arabidopsis thaliana by atmospheric oxygen

    NASA Technical Reports Server (NTRS)

    Kuang, A.; Crispi, M.; Musgrave, M. E.

    1998-01-01

    Seed development is known to be inhibited completely when plants are grown in oxygen concentrations below 5.1 kPa, but apart from reports of decreased seed weight little is known about embryogenesis at subambient oxygen concentrations above this critical level. Arabidopsis thaliana (L.) Heynh. plants were grown full term under continuous light in premixed atmospheres with oxygen partial pressures of 2.5, 5.1, 10.1, 16.2 and 21.3 kPa O2, 0.035 kPa CO2 and the balance nitrogen. Seeds were harvested for germination tests and microscopy when siliques had yellowed. Seed germination was depressed in O2 treatments below 16.2 kPa, and seeds from plants grown in 2.5 kPa O2 did not germinate at all. Fewer than 25% of the seeds from plants grown in 5.1 kPa oxygen germinated and most of the seedlings appeared abnormal. Light and scanning electron microscopic observation of non-germinated seeds showed that these embryos had stopped growing at different developmental stages depending upon the prevailing oxygen level. Embryos stopped growing at the heart-shaped to linear cotyledon stage in 5.1 kPa O2, at around the curled cotyledon stage in 10.1 kPa O2, and at the premature stage in 16.2 kPa O2. Globular and heart-shaped embryos were observed in sectioned seeds from plants grown in 2.5 kPa O2. Tissue degeneration caused by cell autolysis and changes in cell structure were observed in cotyledons and radicles. Transmission electron microscopy of mature seeds showed that storage substances, such as protein bodies, were reduced in subambient oxygen treatments. The results demonstrate control of embryo development by oxygen in Arabidopsis.

  11. Surface control of epitaxial manganite films via oxygen pressure

    DOE PAGESBeta

    Tselev, Alexander; Vasudevan, Rama K.; Gianfrancesco, Anthony G.; Qiao, Liang; Ganesh, Panchapakesan; Meyer, Tricia L.; Lee, Ho Nyung; Biegalski, Michael D.; Baddorf, Arthur P.; Kalinin, Sergei

    2015-03-11

    The trend to reduce device dimensions demands increasing attention to atomic-scale details of structure of thin films as well as to pathways to control it. We found that this is of special importance in the systems with multiple competing interactions. We have used in situ scanning tunneling microscopy to image surfaces of La5/8Ca3/8MnO3 films grown by pulsed laser deposition. The atomically resolved imaging was combined with in situ angle-resolved X-ray photoelectron spectroscopy. We find a strong effect of the background oxygen pressure during deposition on structural and chemical features of the film surface. Deposition at 50 mTorr of O2 leadsmore » to mixed-terminated film surfaces, with B-site (MnO2) termination being structurally imperfect at the atomic scale. Moreover, a relatively small reduction of the oxygen pressure to 20 mTorr results in a dramatic change of the surface structure leading to a nearly perfectly ordered B-site terminated surface with only a small fraction of A-site (La,Ca)O termination. This is accompanied, however, by surface roughening at a mesoscopic length scale. The results suggest that oxygen has a strong link to the adatom mobility during growth. The effect of the oxygen pressure on dopant surface segregation is also pronounced: Ca surface segregation is decreased with oxygen pressure reduction.« less

  12. Environmental Control and Life Support System, Oxygen Generation System

    NASA Technical Reports Server (NTRS)

    2000-01-01

    The Environmental Control and Life Support System (ECLSS) Group of the Flight Projects Directorate at the Marshall Space Flight Center (MSFC) in Huntsville, Alabama, is responsible for designing and building the life support systems that will provide the crew of the International Space Station (ISS) a comfortable environment in which to live and work. This is a close-up view of ECLSS Oxygen Generation System (OGS) rack. The ECLSS Group at the MSFC oversees the development of the OGS, which produces oxygen for breathing air for the crew and laboratory animals, as well as for replacing oxygen lost due to experiment use, airlock depressurization, module leakage, and carbon dioxide venting. The OGS consists primarily of the Oxygen Generator Assembly (OGA), provided by the prime contractor, the Hamilton Sundstrand Space Systems, International (HSSSI) in Windsor Locks, Cornecticut and a Power Supply Module (PSM), supplied by the MSFC. The OGA is comprised of a cell stack that electrolyzes (breaks apart the hydrogen and oxygen molecules) some of the clean water provided by the Water Recovery System and the separators that remove the gases from water after electrolysis. The PSM provides the high power to the OGA needed to electrolyze the water.

  13. Surface control of epitaxial manganite films via oxygen pressure

    SciTech Connect

    Tselev, Alexander; Vasudevan, Rama K.; Gianfrancesco, Anthony G.; Qiao, Liang; Ganesh, Panchapakesan; Meyer, Tricia L.; Lee, Ho Nyung; Biegalski, Michael D.; Baddorf, Arthur P.; Kalinin, Sergei

    2015-03-11

    The trend to reduce device dimensions demands increasing attention to atomic-scale details of structure of thin films as well as to pathways to control it. We found that this is of special importance in the systems with multiple competing interactions. We have used in situ scanning tunneling microscopy to image surfaces of La5/8Ca3/8MnO3 films grown by pulsed laser deposition. The atomically resolved imaging was combined with in situ angle-resolved X-ray photoelectron spectroscopy. We find a strong effect of the background oxygen pressure during deposition on structural and chemical features of the film surface. Deposition at 50 mTorr of O2 leads to mixed-terminated film surfaces, with B-site (MnO2) termination being structurally imperfect at the atomic scale. Moreover, a relatively small reduction of the oxygen pressure to 20 mTorr results in a dramatic change of the surface structure leading to a nearly perfectly ordered B-site terminated surface with only a small fraction of A-site (La,Ca)O termination. This is accompanied, however, by surface roughening at a mesoscopic length scale. The results suggest that oxygen has a strong link to the adatom mobility during growth. The effect of the oxygen pressure on dopant surface segregation is also pronounced: Ca surface segregation is decreased with oxygen pressure reduction.

  14. Fixed-trim re-entry guidance analysis

    NASA Technical Reports Server (NTRS)

    Gracey, C.; Cliff, E. M.; Lutze, F. H.; Kelley, H. J.

    1981-01-01

    The terminal guidance problem for a fixed-trim re-entry body is formulated with the objective of synthesizing a closed-loop steering law. A transformation of variables and subsequent linearization of the motion, with the sight-line to the target as a reference, reduces the order of the state system for the guidance problem. The reduced order system, although nonlinear and time-varying, is simple enough to lend itself to synthesis of a class of guidance laws. A generalization of the feedforward device of classical control theory is successfully employed for compensation of roll autopilot lags. The proposed steering law exhibits superior miss-distance performance in a computational comparison with existing fixed-trim guidance laws.

  15. The E3 ubiquitin ligase Trim7 mediates c-Jun/AP-1 activation by Ras signalling

    PubMed Central

    Chakraborty, Atanu; Diefenbacher, Markus E.; Mylona, Anastasia; Kassel, Olivier; Behrens, Axel

    2015-01-01

    The c-Jun/AP-1 transcription factor controls key cellular behaviours, including proliferation and apoptosis, in response to JNK and Ras/MAPK signalling. While the JNK pathway has been well characterised, the mechanism of activation by Ras was elusive. Here we identify the uncharacterised ubiquitin ligase Trim7 as a critical component of AP-1 activation via Ras. We found that MSK1 directly phosphorylates Trim7 in response to direct activation by the Ras–Raf–MEK–ERK pathway, and this modification stimulates Trim7 E3 ubiquitin ligase activity. Trim7 mediates Lys63-linked ubiquitination of the AP-1 coactivator RACO-1, leading to RACO-1 protein stabilisation. Consequently, Trim7 depletion reduces RACO-1 levels and AP-1-dependent gene expression. Moreover, transgenic overexpression of Trim7 increases lung tumour burden in a Ras-driven cancer model, and knockdown of Trim7 in established xenografts reduces tumour growth. Thus, phosphorylation-ubiquitination crosstalk between MSK1, Trim7 and RACO-1 completes the long sought-after mechanism linking growth factor signalling and AP-1 activation. PMID:25851810

  16. TRIM31 promotes Atg5/Atg7-independent autophagy in intestinal cells

    PubMed Central

    Ra, Eun A.; Lee, Taeyun A.; Won Kim, Seung; Park, Areum; Choi, Hyun jin; Jang, Insook; Kang, Sujin; Hee Cheon, Jae; Cho, Jin Won; Eun Lee, Ji; Lee, Sungwook; Park, Boyoun

    2016-01-01

    Autophagy is responsible for the bulk degradation of cytosolic constituents and plays an essential role in the intestinal epithelium by controlling beneficial host–bacterial relationships. Atg5 and Atg7 are thought to be critical for autophagy. However, Atg5- or Atg7-deficient cells still form autophagosomes and autolysosomes, and are capable of removing proteins or bacteria. Here, we report that human TRIM31 (tripartite motif), an intestine-specific protein localized in mitochondria, is essential for promoting lipopolysaccharide-induced Atg5/Atg7-independent autophagy. TRIM31 directly interacts with phosphatidylethanolamine in a palmitoylation-dependent manner, leading to induction of autolysosome formation. Depletion of endogenous TRIM31 significantly increases the number of intestinal epithelial cells containing invasive bacteria. Crohn's disease patients display TRIM31 downregulation. Human cytomegalovirus-infected intestinal cells show a decrease in TRIM31 expression as well as a significant increase in bacterial load, reversible by the introduction of wild-type TRIM31. We provide insight into an alternative autophagy pathway that protects against intestinal pathogenic bacterial infection. PMID:27216961

  17. Piloted simulation study of the effects of an automated trim system on flight characteristics of a light twin-engine airplane with one engine inoperative

    NASA Technical Reports Server (NTRS)

    Stewart, E. C.; Brown, P. W.; Yenni, K. R.

    1986-01-01

    A simulation study was conducted to investigate the piloting problems associated with failure of an engine on a generic light twin-engine airplane. A primary piloting problem for a light twin-engine airplane after an engine failure is maintaining precise control of the airplane in the presence of large steady control forces. To address this problem, a simulated automatic trim system which drives the trim tabs as an open-loop function of propeller slipstream measurements was developed. The simulated automatic trim system was found to greatly increase the controllability in asymmetric powered flight without having to resort to complex control laws or an irreversible control system. However, the trim-tab control rates needed to produce the dramatic increase in controllability may require special design consideration for automatic trim system failures. Limited measurements obtained in full-scale flight tests confirmed the fundamental validity of the proposed control law.

  18. Ship trim optimization: assessment of influence of trim on resistance of MOERI container ship.

    PubMed

    Sherbaz, Salma; Duan, Wenyang

    2014-01-01

    Environmental issues and rising fuel prices necessitate better energy efficiency in all sectors. Shipping industry is a stakeholder in environmental issues. Shipping industry is responsible for approximately 3% of global CO₂ emissions, 14-15% of global NO(X) emissions, and 16% of global SO(X) emissions. Ship trim optimization has gained enormous momentum in recent years being an effective operational measure for better energy efficiency to reduce emissions. Ship trim optimization analysis has traditionally been done through tow-tank testing for a specific hullform. Computational techniques are increasingly popular in ship hydrodynamics applications. The purpose of this study is to present MOERI container ship (KCS) hull trim optimization by employing computational methods. KCS hull total resistances and trim and sinkage computed values, in even keel condition, are compared with experimental values and found in reasonable agreement. The agreement validates that mesh, boundary conditions, and solution techniques are correct. The same mesh, boundary conditions, and solution techniques are used to obtain resistance values in different trim conditions at Fn = 0.2274. Based on attained results, optimum trim is suggested. This research serves as foundation for employing computational techniques for ship trim optimization.

  19. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

    PubMed Central

    Capella-Gutiérrez, Salvador; Silla-Martínez, José M.; Gabaldón, Toni

    2009-01-01

    Summary: Multiple sequence alignments are central to many areas of bioinformatics. It has been shown that the removal of poorly aligned regions from an alignment increases the quality of subsequent analyses. Such an alignment trimming phase is complicated in large-scale phylogenetic analyses that deal with thousands of alignments. Here, we present trimAl, a tool for automated alignment trimming, which is especially suited for large-scale phylogenetic analyses. trimAl can consider several parameters, alone or in multiple combinations, for selecting the most reliable positions in the alignment. These include the proportion of sequences with a gap, the level of amino acid similarity and, if several alignments for the same set of sequences are provided, the level of consistency across different alignments. Moreover, trimAl can automatically select the parameters to be used in each specific alignment so that the signal-to-noise ratio is optimized. Availability: trimAl has been written in C++, it is portable to all platforms. trimAl is freely available for download (http://trimal.cgenomics.org) and can be used online through the Phylemon web server (http://phylemon2.bioinfo.cipf.es/). Supplementary Material is available at http://trimal.cgenomics.org/publications. Contact: tgabaldon@crg.es PMID:19505945

  20. Controllable positive exchange bias via redox-driven oxygen migration.

    PubMed

    Gilbert, Dustin A; Olamit, Justin; Dumas, Randy K; Kirby, B J; Grutter, Alexander J; Maranville, Brian B; Arenholz, Elke; Borchers, Julie A; Liu, Kai

    2016-01-01

    Ionic transport in metal/oxide heterostructures offers a highly effective means to tailor material properties via modification of the interfacial characteristics. However, direct observation of ionic motion under buried interfaces and demonstration of its correlation with physical properties has been challenging. Using the strong oxygen affinity of gadolinium, we design a model system of GdxFe1-x/NiCoO bilayer films, where the oxygen migration is observed and manifested in a controlled positive exchange bias over a relatively small cooling field range. The exchange bias characteristics are shown to be the result of an interfacial layer of elemental nickel and cobalt, a few nanometres in thickness, whose moments are larger than expected from uncompensated NiCoO moments. This interface layer is attributed to a redox-driven oxygen migration from NiCoO to the gadolinium, during growth or soon after. These results demonstrate an effective path to tailoring the interfacial characteristics and interlayer exchange coupling in metal/oxide heterostructures. PMID:26996674

  1. Controllable positive exchange bias via redox-driven oxygen migration

    DOE PAGESBeta

    Gilbert, Dustin A.; Olamit, Justin; Dumas, Randy K.; Kirby, B. J.; Grutter, Alexander J.; Maranville, Brian B.; Arenholz, Elke; Borchers, Julie A.; Liu, Kai

    2016-03-21

    We report that ionic transport in metal/oxide heterostructures offers a highly effective means to tailor material properties via modification of the interfacial characteristics. However, direct observation of ionic motion under buried interfaces and demonstration of its correlation with physical properties has been challenging. Using the strong oxygen affinity of gadolinium, we design a model system of GdxFe1-x/NiCoO bilayer films, where the oxygen migration is observed and manifested in a controlled positive exchange bias over a relatively small cooling field range. The exchange bias characteristics are shown to be the result of an interfacial layer of elemental nickel and cobalt, amore » few nanometres in thickness, whose moments are larger than expected from uncompensated NiCoO moments. This interface layer is attributed to a redox-driven oxygen migration from NiCoO to the gadolinium, during growth or soon after. Ultimately, these results demonstrate an effective path to tailoring the interfacial characteristics and interlayer exchange coupling in metal/oxide heterostructures.« less

  2. Oxygen fugacity control in piston-cylinder experiments

    NASA Astrophysics Data System (ADS)

    Jakobsson, Sigurdur

    2012-09-01

    The main goal of this study was to develop and test a capsule assembly for use in piston-cylinder experiments where oxygen fugacity could be controlled in the vicinity of the QFM buffer without H2O loss or carbon contamination of the sample material. The assembly consists of an outer Pt-capsule containing a solid buffer (Ni-NiO or Co-CoO) plus H2O and an inner AuPd-capsule, containing the sample, H2O and a Pt-wire. No H2O loss is observed from the sample, even after 48 h, but a slight increase in H2O content is found in longer runs due to oxygen and hydrogen diffusion into the AuPd-capsule. Oxygen fugacity of runs in equilibrium with the Ni-NiO (NNO) and Co-CoO (CoCO) buffers was measured by analyzing Fe dissolved in the Pt-wire and in the AuPd-capsule. The second method gives values that are in good agreement with established buffer values, whereas results from the first method are one half to one log units higher than the established values.

  3. Controllable positive exchange bias via redox-driven oxygen migration

    NASA Astrophysics Data System (ADS)

    Gilbert, Dustin A.; Olamit, Justin; Dumas, Randy K.; Kirby, B. J.; Grutter, Alexander J.; Maranville, Brian B.; Arenholz, Elke; Borchers, Julie A.; Liu, Kai

    2016-03-01

    Ionic transport in metal/oxide heterostructures offers a highly effective means to tailor material properties via modification of the interfacial characteristics. However, direct observation of ionic motion under buried interfaces and demonstration of its correlation with physical properties has been challenging. Using the strong oxygen affinity of gadolinium, we design a model system of GdxFe1-x/NiCoO bilayer films, where the oxygen migration is observed and manifested in a controlled positive exchange bias over a relatively small cooling field range. The exchange bias characteristics are shown to be the result of an interfacial layer of elemental nickel and cobalt, a few nanometres in thickness, whose moments are larger than expected from uncompensated NiCoO moments. This interface layer is attributed to a redox-driven oxygen migration from NiCoO to the gadolinium, during growth or soon after. These results demonstrate an effective path to tailoring the interfacial characteristics and interlayer exchange coupling in metal/oxide heterostructures.

  4. Controllable positive exchange bias via redox-driven oxygen migration.

    PubMed

    Gilbert, Dustin A; Olamit, Justin; Dumas, Randy K; Kirby, B J; Grutter, Alexander J; Maranville, Brian B; Arenholz, Elke; Borchers, Julie A; Liu, Kai

    2016-01-01

    Ionic transport in metal/oxide heterostructures offers a highly effective means to tailor material properties via modification of the interfacial characteristics. However, direct observation of ionic motion under buried interfaces and demonstration of its correlation with physical properties has been challenging. Using the strong oxygen affinity of gadolinium, we design a model system of GdxFe1-x/NiCoO bilayer films, where the oxygen migration is observed and manifested in a controlled positive exchange bias over a relatively small cooling field range. The exchange bias characteristics are shown to be the result of an interfacial layer of elemental nickel and cobalt, a few nanometres in thickness, whose moments are larger than expected from uncompensated NiCoO moments. This interface layer is attributed to a redox-driven oxygen migration from NiCoO to the gadolinium, during growth or soon after. These results demonstrate an effective path to tailoring the interfacial characteristics and interlayer exchange coupling in metal/oxide heterostructures.

  5. Controllable positive exchange bias via redox-driven oxygen migration

    PubMed Central

    Gilbert, Dustin A.; Olamit, Justin; Dumas, Randy K.; Kirby, B. J.; Grutter, Alexander J.; Maranville, Brian B.; Arenholz, Elke; Borchers, Julie A.; Liu, Kai

    2016-01-01

    Ionic transport in metal/oxide heterostructures offers a highly effective means to tailor material properties via modification of the interfacial characteristics. However, direct observation of ionic motion under buried interfaces and demonstration of its correlation with physical properties has been challenging. Using the strong oxygen affinity of gadolinium, we design a model system of GdxFe1−x/NiCoO bilayer films, where the oxygen migration is observed and manifested in a controlled positive exchange bias over a relatively small cooling field range. The exchange bias characteristics are shown to be the result of an interfacial layer of elemental nickel and cobalt, a few nanometres in thickness, whose moments are larger than expected from uncompensated NiCoO moments. This interface layer is attributed to a redox-driven oxygen migration from NiCoO to the gadolinium, during growth or soon after. These results demonstrate an effective path to tailoring the interfacial characteristics and interlayer exchange coupling in metal/oxide heterostructures. PMID:26996674

  6. Development and wind tunnel evaluation of a shape memory alloy based trim tab actuator for a civil aircraft

    NASA Astrophysics Data System (ADS)

    Senthilkumar, P.; Jayasankar, S.; Satisha; Sateesh, V. L.; Kamaleshaiah, M. S.; Dayananda, G. N.

    2013-09-01

    This paper presents the development and wind tunnel evaluation of a shape memory alloy (SMA) based smart trim tab for a typical two seater civil aircraft. The SMA actuator was housed in the port side of the elevator for the purpose of actuating the trim tab. Wind tunnel tests were conducted on a full scale horizontal tail model with elevator and trim tab at free stream speeds of 25, 35 and 45 m s-1, and also for a number of deflections of the elevator (30° up, 0° neutral and 25° down) and trim tab (11° and 21° up and 15° and 31° down). To measure the hinge moment experienced by the trim tab under various test conditions, two miniaturized balances were designed and fabricated. A gain scheduled proportional integral (GSPI) controller was developed to control the SMA actuated smart trim tab. It was confirmed during the tests that the trim tab could be controlled at the desired position against the aerodynamic loads acting on it for the various test conditions.

  7. Modeling, simulation, and control of an extraterrestrial oxygen production plant

    NASA Technical Reports Server (NTRS)

    Schooley, L.; Cellier, F.; Zeigler, B.; Doser, A.; Farrenkopf, G.

    1991-01-01

    The immediate objective is the development of a new methodology for simulation of process plants used to produce oxygen and/or other useful materials from local planetary resources. Computer communication, artificial intelligence, smart sensors, and distributed control algorithms are being developed and implemented so that the simulation or an actual plant can be controlled from a remote location. The ultimate result of this research will provide the capability for teleoperation of such process plants which may be located on Mars, Luna, an asteroid, or other objects in space. A very useful near-term result will be the creation of an interactive design tool, which can be used to create and optimize the process/plant design and the control strategy. This will also provide a vivid, graphic demonstration mechanism to convey the results of other researchers to the sponsor.

  8. Nonhuman TRIM5 Variants Enhance Recognition of HIV-1-Infected Cells by CD8+ T Cells

    PubMed Central

    Jimenez-Moyano, Esther; Ruiz, Alba; Kløverpris, Henrik N.; Rodriguez-Plata, Maria T.; Peña, Ruth; Blondeau, Caroline; Selwood, David L.; Izquierdo-Useros, Nuria; Moris, Arnaud; Clotet, Bonaventura; Goulder, Philip; Towers, Greg J.

    2016-01-01

    -cyclophilin A (TCyp), are attractive candidates owing to their potency in sensing HIV-1 and blocking its activity. Here, we show that expression of RhT5 and TCyp in HIV-1-infected cells improves CD8+ T-cell-mediated inhibition through the direct activation of HIV-1-specific CD8+ T-cell responses. We found that the potency in CD8+ activation was stronger for RhT5 variants and capsid-specific CD8+ T cells in a mechanism that relies on TRIM5-dependent particle recruitment to cellular proteasomes. This novel mechanism couples innate viral sensing with cellular immunity in a single protein and could be exploited to develop innovative therapeutics for control of HIV-1 infection. PMID:27440884

  9. TRIM24 Is an Oncogenic Transcriptional Activator in Prostate Cancer.

    PubMed

    Groner, Anna C; Cato, Laura; de Tribolet-Hardy, Jonas; Bernasocchi, Tiziano; Janouskova, Hana; Melchers, Diana; Houtman, René; Cato, Andrew C B; Tschopp, Patrick; Gu, Lei; Corsinotti, Andrea; Zhong, Qing; Fankhauser, Christian; Fritz, Christine; Poyet, Cédric; Wagner, Ulrich; Guo, Tiannan; Aebersold, Ruedi; Garraway, Levi A; Wild, Peter J; Theurillat, Jean-Philippe; Brown, Myles

    2016-06-13

    Androgen receptor (AR) signaling is a key driver of prostate cancer (PC). While androgen-deprivation therapy is transiently effective in advanced disease, tumors often progress to a lethal castration-resistant state (CRPC). We show that recurrent PC-driver mutations in speckle-type POZ protein (SPOP) stabilize the TRIM24 protein, which promotes proliferation under low androgen conditions. TRIM24 augments AR signaling, and AR and TRIM24 co-activated genes are significantly upregulated in CRPC. Expression of TRIM24 protein increases from primary PC to CRPC, and both TRIM24 protein levels and the AR/TRIM24 gene signature predict disease recurrence. Analyses in CRPC cells reveal that the TRIM24 bromodomain and the AR-interacting motif are essential to support proliferation. These data provide a rationale for therapeutic TRIM24 targeting in SPOP mutant and CRPC patients.

  10. Some Tree Trimming Best Left to The Pros

    MedlinePlus

    ... https://medlineplus.gov/news/fullstory_159924.html Some Tree Trimming Best Left to the Pros For instance, ... July 17, 2016 (HealthDay News) -- Trimming or removing trees should be done with caution, particularly near power ...

  11. Inhibition of nitrogenase by oxygen in marine cyanobacteria controls the global nitrogen and oxygen cycles

    NASA Astrophysics Data System (ADS)

    Berman-Frank, I.; Chen, Y.-B.; Gerchman, Y.; Dismukes, G. C.; Falkowski, P. G.

    2005-03-01

    Cyanobacterial N2-fixation supplies the vast majority of biologically accessible inorganic nitrogen to nutrient-poor aquatic ecosystems. The process, catalyzed by the heterodimeric protein complex, nitrogenase, is thought to predate that of oxygenic photosynthesis. Remarkably, while the enzyme plays such a critical role in Earth's biogeochemical cycles, the activity of nitrogenase in cyanobacteria is markedly inhibited in vivo at a post-translational level by the concentration of O2 in the contemporary atmosphere leading to metabolic and biogeochemical inefficiency in N2 fixation. We illustrate this crippling effect with data from Trichodesmium spp. an important contributor of "new nitrogen" to the world's subtropical and tropical oceans. The enzymatic inefficiency of nitrogenase imposes a major elemental taxation on diazotrophic cyanobacteria both in the costs of protein synthesis and for scarce trace elements, such as iron. This restriction has, in turn, led to a global limitation of fixed nitrogen in the contemporary oceans and provides a strong biological control on the upper bound of oxygen concentration in Earth's atmosphere.

  12. Development of a novel electrochemical system for oxygen control (ESOC) to examine dissolved oxygen inhibition on algal activity.

    PubMed

    Keymer, Philip C; Pratt, Steven; Lant, Paul A

    2013-09-01

    The development of an Electrochemical System for Oxygen Control (ESOC) for examining algal photosynthetic activity as a function of dissolved oxygen (DO) is outlined. The main innovation of the tool is coulombic titration in order to balance the electrochemical reduction of oxygen with the oxygen input to achieve a steady DO set-point. ESOC allows quantification of algal oxygen production whilst simultaneously maintaining a desired DO concentration. The tool was validated abiotically by comparison with a mass transfer approach for quantifying oxygenation. It was then applied to quantify oxygen inhibition of algal activity. Five experiments, using an enriched culture of Scenedesmus sp. as the inoculum, are presented. For each experiment, ESOC was used to quantify algal activity at a series of DO set-points. In all experiments substantial oxygen inhibition was observed at DO >30 mgO2 L-1. Inhibition was shown to fit a Hill inhibition model, with a common Hill coefficient of 0.22±0.07 L mg-1 and common log10  CI50 of 27.2±0.7 mg L-1. This is the first time that the oxygen inhibition kinetic parameters have been quantified under controlled DO conditions.

  13. 14 CFR 25.161 - Trim.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    .... The airplane must maintain longitudinal trim during— (1) A climb with maximum continuous power at a... degrees) at 1.3 V SR 1 during climbing flight with— (1) The critical engine inoperative; (2) The remaining... flight with the most unfavorable center of gravity and at the climb speed, configuration, and...

  14. 14 CFR 25.161 - Trim.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    .... The airplane must maintain longitudinal trim during— (1) A climb with maximum continuous power at a... degrees) at 1.3 V SR 1 during climbing flight with— (1) The critical engine inoperative; (2) The remaining... flight with the most unfavorable center of gravity and at the climb speed, configuration, and...

  15. Effects of Beak Trimming on Pecking Force

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Beak trimming in the production laying hen has come under great scrutiny by welfare and consumer advocacy groups as a potential source of acute and chronic pain as well as having the potential to inhibit the freedom to express normal behaviors such as feeding behaviors. Although several studies have...

  16. 7 CFR 51.571 - Well trimmed.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 2 2011-01-01 2011-01-01 false Well trimmed. 51.571 Section 51.571 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  17. 7 CFR 51.571 - Well trimmed.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Well trimmed. 51.571 Section 51.571 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  18. 7 CFR 51.607 - Well trimmed.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 2 2011-01-01 2011-01-01 false Well trimmed. 51.607 Section 51.607 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  19. 7 CFR 51.607 - Well trimmed.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Well trimmed. 51.607 Section 51.607 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  20. Building Trades. Block VIII. Interior Trim.

    ERIC Educational Resources Information Center

    Texas A and M Univ., College Station. Vocational Instructional Services.

    This curriculum for interior trim provides instructional materials for 18 informational and manipulative lessons. A list of 11 references precedes the course materials. The instructor's plan for each informational lesson begins by providing this information: subject, aim, required teaching aids, required materials, references, and prerequisite…

  1. 16 CFR 303.12 - Trimmings of household textile articles.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 16 Commercial Practices 1 2011-01-01 2011-01-01 false Trimmings of household textile articles. 303... CONGRESS RULES AND REGULATIONS UNDER THE TEXTILE FIBER PRODUCTS IDENTIFICATION ACT § 303.12 Trimmings of household textile articles. (a) Trimmings incorporated in articles of wearing apparel and other...

  2. 16 CFR 303.12 - Trimmings of household textile articles.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 16 Commercial Practices 1 2010-01-01 2010-01-01 false Trimmings of household textile articles. 303... CONGRESS RULES AND REGULATIONS UNDER THE TEXTILE FIBER PRODUCTS IDENTIFICATION ACT § 303.12 Trimmings of household textile articles. (a) Trimmings incorporated in articles of wearing apparel and other...

  3. 16 CFR 303.12 - Trimmings of household textile articles.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 16 Commercial Practices 1 2014-01-01 2014-01-01 false Trimmings of household textile articles. 303... household textile articles. (a) Trimmings incorporated in articles of wearing apparel and other household textile articles may, among other forms of trim, include: (1) Rick-rack, tape, belting, binding,...

  4. 16 CFR 303.12 - Trimmings of household textile articles.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 16 Commercial Practices 1 2012-01-01 2012-01-01 false Trimmings of household textile articles. 303... household textile articles. (a) Trimmings incorporated in articles of wearing apparel and other household textile articles may, among other forms of trim, include: (1) Rick-rack, tape, belting, binding,...

  5. 16 CFR 303.12 - Trimmings of household textile articles.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 16 Commercial Practices 1 2013-01-01 2013-01-01 false Trimmings of household textile articles. 303... household textile articles. (a) Trimmings incorporated in articles of wearing apparel and other household textile articles may, among other forms of trim, include: (1) Rick-rack, tape, belting, binding,...

  6. Oxygen Generation System Laptop Bus Controller Flight Software

    NASA Technical Reports Server (NTRS)

    Rowe, Chad; Panter, Donna

    2009-01-01

    The Oxygen Generation System Laptop Bus Controller Flight Software was developed to allow the International Space Station (ISS) program to activate specific components of the Oxygen Generation System (OGS) to perform a checkout of key hardware operation in a microgravity environment, as well as to perform preventative maintenance operations of system valves during a long period of what would otherwise be hardware dormancy. The software provides direct connectivity to the OGS Firmware Controller with pre-programmed tasks operated by on-orbit astronauts to exercise OGS valves and motors. The software is used to manipulate the pump, separator, and valves to alleviate the concerns of hardware problems due to long-term inactivity and to allow for operational verification of microgravity-sensitive components early enough so that, if problems are found, they can be addressed before the hardware is required for operation on-orbit. The decision was made to use existing on-orbit IBM ThinkPad A31p laptops and MIL-STD-1553B interface cards as the hardware configuration. The software at the time of this reporting was developed and tested for use under the Windows 2000 Professional operating system to ensure compatibility with the existing on-orbit computer systems.

  7. The C-Terminal Tail of TRIM56 Dictates Antiviral Restriction of Influenza A and B Viruses by Impeding Viral RNA Synthesis

    PubMed Central

    Liu, Baoming; Li, Nan L.; Shen, Yang; Bao, Xiaoyong; Elbahesh, Husni; Webby, Richard J.

    2016-01-01

    -influenza virus activity of TRIM56 was independent of the E3 ligase activity. Rather, expression of a short segment within the very C-terminal tail of TRIM56 inhibited the replication of influenza viruses as effectively as that of full-length TRIM56 by specifically targeting viral RNA synthesis. These data reveal the remarkable multifaceted activity of TRIM56, which has developed multiple domains to inhibit multiple viral families. They also raise the possibility of developing a broad-spectrum, TRIM56-based antiviral approach for addition to influenza prophylaxis and/or control strategies. PMID:26889027

  8. Trim69 regulates zebrafish brain development by ap-1 pathway

    PubMed Central

    Han, Ruiqin; Wang, Renxian; Zhao, Qing; Han, Yongqing; Zong, Shudong; Miao, Shiying; Song, Wei; Wang, Linfang

    2016-01-01

    Proteins belonging to the TRIM family have been implicated in a variety of cellular processes such as apoptosis, differentiation, neurogenesis, muscular physiology and innate immune responses. Trim69, previously identified as a novel gene cloned from a human testis cDNA library, has a homologous gene in zebrafish and this study focused on investigating the function of trim69 in zebrafish neurogenesis. Trim69 was found to be expressed in zebrafish embryo brain at the early stages. Knockdown of trim69 led to deformed brain development, obvious signs of apoptosis present in the head, and decreased expression of neuronal differentiation and stem cell markers. This phenotype was rescued upon co-injection of human mRNA together along with the trim69 knockdown. Results of this study also showed an interaction between TRIM69 and c-Jun in human cells, and upon TRIM69 knock down c-Jun expression subsequently increased, whereas the over-expression of TRIM69 led to the down-regulation of c-Jun. Additionally, knockdown both c-Jun and trim69 can rescue the deformed brain, evident cellular apoptosis in the head and decreased expression of neuronal differentiation and stem cell markers. Overall, our results support a role for trim69 in the development of the zebrafish brain through ap-1 pathway. PMID:27050765

  9. Predicting Tensile Stretchability of Trimmed AA6111-T4 Sheets

    SciTech Connect

    Hu, Xiaohua; Sun, Xin; Golovashchenko, Sergey F.

    2014-02-15

    An integrated manufacturing process simulation framework has been developed to predict the trimmed edge tensile stretchability of AA6111-T4 sheets by incorporating the burr geometry, damage, and plastic strain from trimming simulations into subsequent tensile stretchability simulations. The influence of the trimming die clearances on the predicted tensile stretching ductility (stretchability) is studied and quantitatively compared with experimental measurements. Stretchability is found to decrease with increasing cutting clearances, and simulation results have successfully captured experimentally observed edge crack initiation and failure mode variations for different trimming clearances. Subsequent computational sensitivity studies reveal that while deburring of previously trimmed edges has little influence on tensile stretchability, removal of trimmed edge initial plastic strain may significantly enhance the subsequent trimmed edge stretchability.

  10. A physiological model for extracorporeal oxygenation controller design.

    PubMed

    Walter, Marian; Weyer, Soren; Stollenwerk, Andre; Kopp, Rudger; Arens, Jutta; Leonhardt, Steffen

    2010-01-01

    Long term extracorporeal membrane oxygenation can be used in cases of severe lung failure to maintain sufficient gas exchange without the need to apply higher ventilation pressures which damage the lung additionally. The use of cardiopulmonary bypass devices is well established inside the operating room. The usage of such devices as long-term support in the intensive care unit is still experimental and limited to few cases. This is because neither machine architecture nor staff situation provides for the long term application scenario. In the joint research Project "smart ECLA" we target an advanced ECMO device featuring an automation system capable of maintaining gas concentrations automatically. One key requirement for systematic controller design is the availability of a process model, which will be presented in this article. PMID:21096765

  11. Abiotic Reduction of Selenite and Antimonate Under Controlled Oxygen Conditions

    NASA Astrophysics Data System (ADS)

    Belzile, N.; Truong, H. T.; Polack, R.; Chen, Y.

    2008-12-01

    Laboratory and field studies have reported the oxidation of elemental Se to selenite or selenate or that of antimonite to antimonate but the reduction studies of the two elements, especially in absence of bacteria are more scarce. We have performed experiments on the abiotic reduction of Se(IV) and Sb(V) under controlled oxygen conditions in presence of naturally-encountered reducing agents such as Fe(II) and dissolved sulfide. In the case of selenite, the reduction by ferrous iron is barely detectable at very low concentrations of oxygen. However, at concentrations of 200 ± 50 ppmv in the controlled atmosphere glove box, more iron oxide particles were formed at a higher initial Fe(II) concentration in the system and with time. In the pellets collected after filtration, a significant amount of Se(0) was found. Our field geochemical studies on Se also showed the same phenomenon, i.e. a higher level of Se(0) in lake sediments was accompanied by a higher presence of iron oxides. In the case of antimony, the reduction of Sb(V) by dissolved sulfide was extensive and far more rapid at more acidic pH values. Half lives for Sb(V) in the presence of excess dissolved sulfide at pH values of 5 to 7 were calculated and the reaction was found to be first order with respect to all three of [Sb(V)], [dissolved sulfide] and [H+]. Metastibnite precipitated after reduction of Sb(V) in working experimental samples at buffered pH of 5 and 6. The oxidation product of dissolved sulfide was identified as elemental sulfur. This study has demonstrated the ability of dissolved sulfide to reduce Sb(V) under a variety of environmentally relevant concentrations and conditions.

  12. Commercialization Development of Oxygen Fired CFB for Greenhouse Gas Control

    SciTech Connect

    Nsakala ya Nsakala; Gregory N. Liljedahl; David G. Turek

    2007-03-31

    {sub 2} fired MTF pilot testing and a subsequent retrofit design study of oxygen firing and CO{sub 2} capture on an existing air-fired CFB plant. ALSTOM received a contract award from the DOE to conduct a project entitled 'Commercialization Development of Oxygen Fired CFB for Greenhouse Gas Control', under Cooperative Agreement DE-FC26-04NT42205 that is the subject of this topical report.

  13. Implementing oxygen control in chip-based cell and tissue culture systems.

    PubMed

    Oomen, Pieter E; Skolimowski, Maciej D; Verpoorte, Elisabeth

    2016-09-21

    Oxygen is essential in the energy metabolism of cells, as well as being an important regulatory parameter influencing cell differentiation and function. Interest in precise oxygen control for in vitro cultures of tissues and cells continues to grow, especially with the emergence of the organ-on-a-chip and the desire to emulate in vivo conditions. This was recently discussed in this journal in a Critical Review by Brennan et al. (Lab Chip (2014). DOI: ). Microfluidics can be used to introduce flow to facilitate nutrient supply to and waste removal from in vitro culture systems. Well-defined oxygen gradients can also be established. However, cells can quickly alter the oxygen balance in their vicinity. In this Tutorial Review, we expand on the Brennan paper to focus on the implementation of oxygen analysis in these systems to achieve continuous monitoring. Both electrochemical and optical approaches for the integration of oxygen monitoring in microfluidic tissue and cell culture systems will be discussed. Differences in oxygen requirements from one organ to the next are a challenging problem, as oxygen delivery is limited by its uptake into medium. Hence, we discuss the factors determining oxygen concentrations in solutions and consider the possible use of artificial oxygen carriers to increase dissolved oxygen concentrations. The selection of device material for applications requiring precise oxygen control is discussed in detail, focusing on oxygen permeability. Lastly, a variety of devices is presented, showing the diversity of approaches that can be employed to control and monitor oxygen concentrations in in vitro experiments.

  14. Optimization of 2,3-butanediol production by Klebsiella oxytoca through oxygen transfer rate control

    SciTech Connect

    Beronio, P.B. Jr. . Amoco Research Center); Tsao, G.T. . Lab. of Renewable Resources Engineering)

    1993-12-01

    Production of 2,3-butanediol by Klebsiella oxytoca is influenced by the degree of oxygen limitation. During batch culture studies, two phases of growth are observed: energy-coupled growth, during which cell growth and oxygen supply are coupled; and, energy-uncoupled growth, which arises when the degree of oxygen limitation reaches a critical value. Optimal 2,3-butanediol productivity occurs during the energy-coupled growth phase. In this article, a control system which maintains the batch culture at a constant level of oxygen limitation in the energy-coupled growth regime has been designed. Control, which involves feedback control on the oxygen transfer coefficient, is achieved by continually increasing the partial pressure of oxygen in the feed gas, which in turn continually increases the oxygen transfer rate. Control has resulted in a balanced state of growth, a repression of ethanol formation, and an increase in 2,3-butanediol productivity of 18%.

  15. A 3D-Printed Oxygen Control Insert for a 24-Well Plate

    PubMed Central

    Brennan, Martin D.; Rexius-Hall, Megan L.; Eddington, David T.

    2015-01-01

    3D printing has emerged as a method for directly printing complete microfluidic devices, although printing materials have been limited to oxygen-impermeable materials. We demonstrate the addition of gas permeable PDMS (Polydimethylsiloxane) membranes to 3D-printed microfluidic devices as a means to enable oxygen control cell culture studies. The incorporation of a 3D-printed device and gas-permeable membranes was demonstrated on a 24-well oxygen control device for standard multiwell plates. The direct printing allows integrated distribution channels and device geometries not possible with traditional planar lithography. With this device, four different oxygen conditions were able to be controlled, and six wells were maintained under each oxygen condition. We demonstrate enhanced transcription of the gene VEGFA (vascular endothelial growth factor A) with decreasing oxygen levels in human lung adenocarcinoma cells. This is the first 3D-printed device incorporating gas permeable membranes to facilitate oxygen control in cell culture. PMID:26360882

  16. Measurement and Control of Oxygen Partial Pressure in an Electrostatic Levitator

    NASA Technical Reports Server (NTRS)

    SanSoucie, Michael P.; Rogers, Jan R.

    2014-01-01

    Recently the NASA Marshall Space Flight Center electrostatic levitation (ESL) laboratory has been upgraded to include an oxygen control system. This system allows the oxygen partial pressure within the vacuum chamber to be measured and controlled, at elevated temperatures, theoretically in the range from 10(exp -36) to 10(exp 0) bar. The role of active surface agents in liquid metals is fairly well known; however, published surface tension data typically has large scatter, which has been hypothesized to be caused by the presence of oxygen. The surface tension of metals is affected by even a small amount of adsorption of oxygen. It has even been shown that oxygen partial pressures may need to be as low as 10(exp -24) bar to avoid oxidation. While electrostatic levitation is done under high vacuum, oxide films or dissolved oxygen may have significant effects on materials properties, such as surface tension and viscosity. Therefore, the ability to measure and control the oxygen partial pressure within the chamber is highly desirable. The oxygen control system installed at MSFC contains a potentiometric sensor, which measures the oxygen partial pressure, and an oxygen ion pump. In the pump, a pulse-width modulated electric current is applied to yttrium-stabilized zirconia, resulting in oxygen transfer into or out of the system. Also part of the system is a control unit, which consists of temperature controllers for the sensor and pump, PID-based current loop for the ion pump, and a control algorithm. This system can be used to study the effects of oxygen on the thermophysical properties of metals, ceramics, glasses, and alloys. It can also be used to provide more accurate measurements by processing the samples at very low oxygen partial pressures. The oxygen control system will be explained in more detail and an overview of its use and limitations in an electrostatic levitator will be described. Some preliminary measurements have been made, and the results to date will

  17. Ultralow oxygen treatment for control of Planococcus ficus (Homoptera: Pseudococcidae) on grape benchgrafts.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Controlled atmosphere with ultralow oxygen (ULO) treatments for control of vine mealybug, Planococcus ficus Signoret (Homoptera: Pseudococcidae), on grape rootstocks were developed successfully. Two ULO treatments with 30 ppm oxygen, 3 days at 25'C and 4 days at 15'C, achieved complete control of a...

  18. Ultralow oxygen treatment for control of Planococcus ficus (Homoptera: Pseudococcidae) on grape rootstocks

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Controlled atmosphere with ultralow oxygen (ULO) treatments for control of vine mealybug, Planococcus ficus Signoret (Homoptera: Pseudococcidae), on grape rootstocks were developed successfully. Two ULO treatments with 30 ppm oxygen, 3 days at 25'C and 4 days at 15'C, achieved complete control of a...

  19. A Note About HARP's State Trimming Method

    NASA Technical Reports Server (NTRS)

    Butler, Ricky W.; Hayhurst, Kelly J.; Johnson, Sally C.

    1998-01-01

    This short note provides some additional insight into how the HARP program works. In some cases, it is possible for HARP to tdm away too many states and obtain an optimistic result. The HARP Version 7.0 manual warns the user that 'Unlike the ALL model, the SAME model can automatically drop failure modes for certain system models. The user is cautioned to insure that no important failure modes are dropped; otherwise, a non-conservative result can be given.' This note provides an example of where this occurs and a pointer to further documentation that gives a means of bounding the error associated with trimming these states.

  20. Catalytic Synthesis of Oxygenates: Mechanisms, Catalysts and Controlling Characteristics

    SciTech Connect

    Klier, Kamil; Herman, Richard G

    2005-11-30

    This research focused on catalytic synthesis of unsymmetrical ethers as a part of a larger program involving oxygenated products in general, including alcohols, ethers, esters, carboxylic acids and their derivatives that link together environmentally compliant fuels, monomers, and high-value chemicals. The catalysts studied here were solid acids possessing strong Brnsted acid functionalities. The design of these catalysts involved anchoring the acid groups onto inorganic oxides, e.g. surface-grafted acid groups on zirconia, and a new class of mesoporous solid acids, i.e. propylsulfonic acid-derivatized SBA-15. The former catalysts consisted of a high surface concentration of sulfate groups on stable zirconia catalysts. The latter catalyst consists of high surface area, large pore propylsulfonic acid-derivatized silicas, specifically SBA-15. In both cases, the catalyst design and synthesis yielded high concentrations of acid sites in close proximity to one another. These materials have been well-characterization in terms of physical and chemical properties, as well as in regard to surface and bulk characteristics. Both types of catalysts were shown to exhibit high catalytic performance with respect to both activity and selectivity for the bifunctional coupling of alcohols to form ethers, which proceeds via an efficient SN2 reaction mechanism on the proximal acid sites. This commonality of the dual-site SN2 reaction mechanism over acid catalysts provides for maximum reaction rates and control of selectivity by reaction conditions, i.e. pressure, temperature, and reactant concentrations. This research provides the scientific groundwork for synthesis of ethers for energy applications. The synthesized environmentally acceptable ethers, in part derived from natural gas via alcohol intermediates, exhibit high cetane properties, e.g. methylisobutylether with cetane No. of 53 and dimethylether with cetane No. of 55-60, or high octane properties, e.g. diisopropylether with

  1. Controls on soil oxygen variation across aquatic-terrestrial interfaces

    NASA Astrophysics Data System (ADS)

    Loecke, T.; Burgin, A. J.

    2013-12-01

    Soil oxygen (O2) is a fundamental control on terrestrial biogeochemical cycles including processes producing and consuming greenhouse gases (GHG), yet it is rarely measured. Instead, soil O2 is assumed to be proportional to soil moisture and physical soil properties. For example, soil O2 is often inferred from a 25-year old steady-state diffusion model; however, few data exist to test this model in stochastic systems. The variability of soil O2 may be particularly important to GHG emissions from aquatic-terrestrial interface zones because of the convergence of variable hydrology and rapid biogeochemical processing. Our objective is to gain a better understanding of soil O2 variation and its role in controlling GHG emissions across aquatic-terrestrial interface zones. Specifically, we hypothesize that in aquatic-terrestrial interface ecosystems, soil moisture predicts O2 concentration under stable conditions where diffusion dominates, but fails under dynamic conditions (e.g., water table fluctuations or precipitation) due to advective flux during soil drainage and lags in biological O2 consumption. Furthermore, we hypothesize that GHG emissions will correspond to variation in soil O2. Twenty-four near-continuous (hourly readings) soil O2 and moisture sensors were installed across an aquatic-terrestrial interface zone of a constructed wetland in April 2012. Drought conditions (2012) resulted in minimal soil O2 variation. Despite dry conditions a diurnal pattern of lower soil O2 during the day was observed. When precipitation increased in September (due to the remnants of Hurricane Isaac), soil O2 variation increased substantially with 20 of the 24 sensors recording soil O2 concentrations below 5%. The relationship between soil moisture and soil O2 was non-linear during periods of soil drainage and precipitation. A rapid (change of 10% over <24 hours) increase in soil O2 occurs at ~ 40% water filled soil volume during soil drainage. This rapid increase appears related

  2. Stress measurements on beak-trimmed and untrimmed pullets.

    PubMed

    Struwe, F J; Gleaves, E W; Douglas, J H

    1992-07-01

    Stress in poultry is difficult to define and measure. There is general agreement that some modern poultry production practices may exert a certain amount of stress on birds. Three experiments were conducted to explore possible measures of stress associated with beak trimming and rearing schemes. Experiments 1 and 2 examined different degrees of beak trimming and rearing schemes of wire floor versus litter floor in pullet production. Experiment 3 examined the effect of beak trimming on feed consumption for 14 days after trimming. Adrenal glands of untrimmed birds were heavier (P less than .05) than those of trimmed birds at the end of the pullet growing period in Experiments 1 and 2, evidence that beak trimming reduced overall chronic stress levels. Hearts of untrimmed birds were heavier (P less than .05) than those of trimmed birds in Experiment 1. Hearts and spleens were not affected in Experiment 2. In comparisons of rearing schemes (litter versus wire), birds grown on litter floors had heavier adrenal glands and a greater incidence of cannibalism in the later weeks of Experiments 1 and 2. This indicated that a stressful interaction among penmates had occurred. Birds grown on litter floors consumed more feed than those grown on wire, and the untrimmed birds from both floor types consumed more total feed than trimmed birds. By the end of the growing period, body weights were not different in either study, indicating compensation for any early beak trimming stress. Beak trimming produced a decrease in feed intake in Experiment 3, consumption was reduced (P less than .05) in 5 of the first 8 days after trimming. PMID:1641379

  3. Hexagonal assembly of a restricting TRIM5α protein

    PubMed Central

    Ganser-Pornillos, Barbie K.; Chandrasekaran, Viswanathan; Pornillos, Owen; Sodroski, Joseph G.; Sundquist, Wesley I.; Yeager, Mark

    2011-01-01

    TRIM5α proteins are restriction factors that protect mammalian cells from retroviral infections by binding incoming viral capsids, accelerating their dissociation, and preventing reverse transcription of the viral genome. Individual TRIM5 isoforms can often protect cells against a broad range of retroviruses, as exemplified by rhesus monkey TRIM5α and its variant, TRIM5-21R, which recognize HIV-1 as well as several distantly related retroviruses. Although capsid recognition is not yet fully understood, previous work has shown that the C-terminal SPRY/B30.2 domain of dimeric TRIM5α binds directly to viral capsids, and that higher-order TRIM5α oligomerization appears to contribute to the efficiency of capsid recognition. Here, we report that recombinant TRIM5-21R spontaneously assembled into two-dimensional paracrystalline hexagonal lattices comprising open, six-sided rings. TRIM5-21R assembly did not require the C-terminal SPRY domain, but did require both protein dimerization and a B-box 2 residue (Arg121) previously implicated in TRIM5α restriction and higher-order assembly. Furthermore, TRIM5-21R assembly was promoted by binding to hexagonal arrays of the HIV-1 CA protein that mimic the surface of the viral capsid. We therefore propose that TRIM5α proteins have evolved to restrict a range of different retroviruses by assembling a deformable hexagonal scaffold that positions the capsid-binding domains to match the symmetry and spacing of the capsid surface lattice. Capsid recognition therefore involves a synergistic combination of direct binding interactions, avidity effects, templated assembly, and lattice complementarity. PMID:21187419

  4. Implementing oxygen control in chip-based cell and tissue culture systems.

    PubMed

    Oomen, Pieter E; Skolimowski, Maciej D; Verpoorte, Elisabeth

    2016-09-21

    Oxygen is essential in the energy metabolism of cells, as well as being an important regulatory parameter influencing cell differentiation and function. Interest in precise oxygen control for in vitro cultures of tissues and cells continues to grow, especially with the emergence of the organ-on-a-chip and the desire to emulate in vivo conditions. This was recently discussed in this journal in a Critical Review by Brennan et al. (Lab Chip (2014). DOI: ). Microfluidics can be used to introduce flow to facilitate nutrient supply to and waste removal from in vitro culture systems. Well-defined oxygen gradients can also be established. However, cells can quickly alter the oxygen balance in their vicinity. In this Tutorial Review, we expand on the Brennan paper to focus on the implementation of oxygen analysis in these systems to achieve continuous monitoring. Both electrochemical and optical approaches for the integration of oxygen monitoring in microfluidic tissue and cell culture systems will be discussed. Differences in oxygen requirements from one organ to the next are a challenging problem, as oxygen delivery is limited by its uptake into medium. Hence, we discuss the factors determining oxygen concentrations in solutions and consider the possible use of artificial oxygen carriers to increase dissolved oxygen concentrations. The selection of device material for applications requiring precise oxygen control is discussed in detail, focusing on oxygen permeability. Lastly, a variety of devices is presented, showing the diversity of approaches that can be employed to control and monitor oxygen concentrations in in vitro experiments. PMID:27492338

  5. Erosion, cavitation, and abrasion resistance of choke trim materials

    SciTech Connect

    Seger, F.O.; Maroofian, I.

    1984-05-01

    An experimental investigation was performed to determine the relative erosion, abrasion and cavitation resistance characteristics of selected materials. Testing was conducted under controlled laboratory conditions to simulate service conditions encountered in production and injection chokes. The testing effort is ongoing. The data accumulated allow informed material selection of conventional and novel trim for all chokes, valves, flow metering orifices, fixed beans and other devices used during drilling, completion and production of offshore and onshore oil and gas wells. Sintered silicon carbide, and tungsten carbide with minimum binder content were the most erosion and abrasion resistant of the materials tested. Cobalt base alloys bar and nickelchrome alloy 625 bar proved to be most cavitation resistant.

  6. Grid generation on trimmed Bezier and NURBS quilted surfaces

    NASA Technical Reports Server (NTRS)

    Woan, Chung-Jin; Clever, Willard C.; Tam, Clement K.

    1995-01-01

    This paper presents some recently added capabilities to RAGGS, Rockwell Automated Grid Generation System. Included are the trimmed surface handling and display capability and structures and unstructured grid generation on trimmed Bezier and NURBS (non-uniform rational B-spline surfaces) quilted surfaces. Samples are given to demonstrate the new capabilities.

  7. Tumour suppressor TRIM33 targets nuclear β-catenin degradation

    PubMed Central

    Xue, Jianfei; Chen, Yaohui; Wu, Yamei; Wang, Zhongyong; Zhou, Aidong; Zhang, Sicong; Lin, Kangyu; Aldape, Kenneth; Majumder, Sadhan; Lu, Zhimin; Huang, Suyun

    2014-01-01

    Aberrant activation of β-catenin in the nucleus has been implicated in a variety of human cancers but the fate of nuclear β-catenin is unknown. Here we demonstrate that tripartite motif-containing protein 33 (TRIM33), acting as an E3 ubiquitin ligase, reduces the abundance of nuclear β-catenin protein. TRIM33-mediated β-catenin is destabilized and is GSK-3β or β-TrCP independent. TRIM33 interacts with and ubiquitylates nuclear β-catenin. Moreover, protein kinase Cδ, which directly phosphorylates β-catenin at Ser715, is required for the TRIM33–β-catenin interaction. The function of TRIM33 in suppressing tumour cell proliferation and brain tumour development depends on TRIM33-promoted β-catenin degradation. In human glioblastoma specimens, endogenous TRIM33 levels are inversely correlated with β-catenin. In summary, our findings identify TRIM33 as a tumour suppressor that can abolish tumour cell proliferation and tumorigenesis by degrading nuclear β-catenin. This work suggests a new therapeutic strategy against human cancers caused by aberrant activation of β-catenin. PMID:25639486

  8. Helicopter trim analysis by shooting and finite element methods with optimally damped Newton iterations

    NASA Technical Reports Server (NTRS)

    Achar, N. S.; Gaonkar, G. H.

    1993-01-01

    Helicopter trim settings of periodic initial state and control inputs are investigated for convergence of Newton iteration in computing the settings sequentially and in parallel. The trim analysis uses a shooting method and a weak version of two temporal finite element methods with displacement formulation and with mixed formulation of displacements and momenta. These three methods broadly represent two main approaches of trim analysis: adaptation of initial-value and finite element boundary-value codes to periodic boundary conditions, particularly for unstable and marginally stable systems. In each method, both the sequential and in-parallel schemes are used, and the resulting nonlinear algebraic equations are solved by damped Newton iteration with an optimally selected damping parameter. The impact of damped Newton iteration, including earlier-observed divergence problems in trim analysis, is demonstrated by the maximum condition number of the Jacobian matrices of the iterative scheme and by virtual elimination of divergence. The advantages of the in-parallel scheme over the conventional sequential scheme are also demonstrated.

  9. Computational aspects of helicopter trim analysis and damping levels from Floquet theory

    NASA Technical Reports Server (NTRS)

    Gaonkar, Gopal H.; Achar, N. S.

    1992-01-01

    Helicopter trim settings of periodic initial state and control inputs are investigated for convergence of Newton iteration in computing the settings sequentially and in parallel. The trim analysis uses a shooting method and a weak version of two temporal finite element methods with displacement formulation and with mixed formulation of displacements and momenta. These three methods broadly represent two main approaches of trim analysis: adaptation of initial-value and finite element boundary-value codes to periodic boundary conditions, particularly for unstable and marginally stable systems. In each method, both the sequential and in-parallel schemes are used and the resulting nonlinear algebraic equations are solved by damped Newton iteration with an optimally selected damping parameter. The impact of damped Newton iteration, including earlier-observed divergence problems in trim analysis, is demonstrated by the maximum condition number of the Jacobian matrices of the iterative scheme and by virtual elimination of divergence. The advantages of the in-parallel scheme over the conventional sequential scheme are also demonstrated.

  10. 76 FR 72978 - Premier Trim, LLC, Spectrum Trim, LLC and Grant Products International, Inc. D/B/A Spectrum Grant...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-11-28

    ... in the Federal Register on July 7, 2010 (75 FR 39047). At the request of the State agency, the... Employment and Training Administration Premier Trim, LLC, Spectrum Trim, LLC and Grant Products International, Inc. D/B/A Spectrum Grant De Mexico Including Workers Whose Unemployment Insurance (UI) Wages Are...

  11. Trimming and procrastination as inversion techniques

    NASA Astrophysics Data System (ADS)

    Backus, George E.

    1996-12-01

    By examining the processes of truncating and approximating the model space (trimming it), and by committing to neither the objectivist nor the subjectivist interpretation of probability (procrastinating), we construct a formal scheme for solving linear and non-linear geophysical inverse problems. The necessary prior information about the correct model xE can be either a collection of inequalities or a probability measure describing where xE was likely to be in the model space X before the data vector y0 was measured. The results of the inversion are (1) a vector z0 that estimates some numerical properties zE of xE; (2) an estimate of the error δz = z0 - zE. As y0 is finite dimensional, so is z0, and hence in principle inversion cannot describe all of xE. The error δz is studied under successively more specialized assumptions about the inverse problem, culminating in a complete analysis of the linear inverse problem with a prior quadratic bound on xE. Our formalism appears to encompass and provide error estimates for many of the inversion schemes current in geomagnetism, and would be equally applicable in geodesy and seismology if adequate prior information were available there. As an idealized example we study the magnetic field at the core-mantle boundary, using satellite measurements of field elements at sites assumed to be almost uniformly distributed on a single spherical surface. Magnetospheric currents are neglected and the crustal field is idealized as a random process with rotationally invariant statistics. We find that an appropriate data compression diagonalizes the variance matrix of the crustal signal and permits an analytic trimming of the idealized problem.

  12. Growth control of Saccharomyces cerevisiae through dose of oxygen atoms

    SciTech Connect

    Hashizume, Hiroshi; Ohta, Takayuki; Ito, Masafumi; Hori, Masaru

    2015-08-31

    To investigate the dose-dependent effects of neutral oxygen radicals on the proliferation as well as the inactivation of microorganisms, we treated suspensions of budding yeast cells with oxygen radicals using an atmospheric-pressure oxygen radical source, varying the fluxes of O({sup 3}P{sub j}) from 1.3 × 10{sup 16} to 2.3 × 10{sup 17 }cm{sup −2} s{sup −1}. Proliferation was promoted at doses of O({sup 3}P{sub j}) ranging from 6 × 10{sup 16} to 2 × 10{sup 17 }cm{sup −3}, and suppressed at doses ranging from 3 × 10{sup 17} to 1 × 10{sup 18 }cm{sup −3}; cells were inactivated by O({sup 3}P{sub j}) doses exceeding 1 × 10{sup 18 }cm{sup −3}, even when the flux was varied over the above flux range. These results showed that the growth of cells was regulated primarily in response to the total dose of O({sup 3}P{sub j})

  13. TRIMe7-CypA, an alternative splicing isoform of TRIMCyp in rhesus macaque, negatively modulates TRIM5α activity

    SciTech Connect

    Na, Lei; Tang, Yan-Dong; Liu, Jian-Dong; Yu, Chang-Qing; Sun, Liu-Ke; Lin, Yue-Zhi; Wang, Xue-Feng; Wang, Xiaojun; Zhou, Jian-Hua

    2014-04-04

    Highlights: • TRIMe7-CypA expresses in rhesus and pig-tailed, but not long-tailed macaques. • TRIMe7-CypA does not show the restriction to a HIV-GFP report virus in vitro. • It acts as a negative modulator to TRIM5α likely by competitive inhibition. - Abstract: The existence of innate, host-specific restriction factors is a major obstacle to the development of nonhuman primate models for AIDS studies, and TRIM5α is one of the most important of these restriction factors. In recent years, a TRIM5 chimeric gene that was retrotransposed by a cyclophilin A (CypA) cDNA was identified in certain macaque species. The TRIM5α-CypA fusion protein, TRIMCyp, which was expressed in these monkeys, had lost its restriction ability toward HIV-1. We previously found that TRIMe7-CypA, an alternative splicing isoform of the TRIMCyp transcripts, was expressed in pig-tailed and rhesus macaques but absent in long-tailed macaques. In this study, the anti-HIV-1 activity of TRIMe7-CypA in the rhesus macaque (RhTRIMe7-CypA) was investigated. The over-expression of RhTRIMe7-CypA in CrFK, HeLa and HEK293T cells did not restrict the infection or replication of an HIV-1-GFP reporter virus in these cells. As a positive control, rhesus (rh)TRIM5α strongly inhibited the reporter virus. Intriguingly, the anti-HIV-1 activity of RhTRIM5α was significantly reduced in a dose-dependent manner by the co-repression of RhTRIMe7-CypA. Our data indicate that although the RhTRIMe7-CypA isoform does not appear to restrict HIV-1, it may act as a negative modulator of TRIM family proteins, presumably by competitive inhibition.

  14. Changes in the microflora on commercial beef trimmings during their collection, distribution and preparation for retail sale as ground beef.

    PubMed

    Gill, C O; McGinnis, C

    1993-06-01

    A commercial process for ground meat production, from the collection of meat plant trimmings to the retailing of consumer packs of ground beef, was examined. The selected process compiled with current concepts of Good Manufacturing Practice. During storage for up to 18 days before grinding, most trimming developed a flora of lactobacilli, of up to 10(7) CFU/g. Numbers of coliforms and of Escherichia coli on stored trimmings increased little and not at all, respectively. Increased total counts, and numbers of both coliforms and E. coli in displayed product indicated loss of control of the temperature of the displayed packaged product. It appears that the need to store a product, taking into account the unpredictable fluctuations in supply and demand, will inevitably result in much ground beef carrying large numbers of spoilage bacteria. Furthermore, currently accepted Good Practice in the retail handling of ground beef does not adequately control either spoilage or the growth of pathogenic bacteria. PMID:8347430

  15. EPR oxygen images predict tumor control by a 50 percent tumor control radiation dose

    PubMed Central

    Elas, Martyna; Magwood, Jessica M.; Butler, Brandi; Li, Chanel; Wardak, Rona; Barth, Eugene D.; Epel, Boris; Rubinstein, Samuel; Pelizzari, Charles A.; Weichselbaum, Ralph R.; Halpern, Howard J.

    2013-01-01

    Clinical trials to ameliorate hypoxia as a strategy to relieve the radiation resistance it causes have prompted a need to assay the precise extent and location of hypoxia in tumors. Electron Paramagnetic Resonance oxygen imaging (EPR O2 imaging) provides a non-invasive means to address this need. To obtain a preclinical proof of principle that EPR O2 images could predict radiation control, we treated mouse tumors at or near doses required to achieve 50 percent control (TCD50). Mice with FSa fibrosarcoma or MCa4 carcinoma were subjected to EPR O2 imaging and immediately radiated to a TCD50 or TCD50 ±10 Gy.. Statistical analysis was permitted by collection of ~ 1300 tumor pO2 image voxels, including the fraction of tumor voxels with pO2 less than 10 mm Hg (HF10). Tumors were followed for 90 days (FSa) or 120 days (MCa4) to determine local control or failure. HF10 obtained from EPR images showed statistically significant differences between tumors that were controlled by the TCD50 and those that were not controlled for both FSa and MCa4. Kaplan-Meier analysis of both types of tumors showed ~90% of mildly hypoxic tumors were controlled (HF10<10%), and only 37% (FSA) and 23% (MCa4) tumors controlled if hypoxic. EPR pO2 image voxel distributions in these ~0.5 ml tumors provide a prediction of radiation curability independent of radiation dose. These data confirm the significance of EPR pO2 hypoxic fractions. The ~90% control of low HF10 tumors argue that ½ ml subvolumes of tumors may be more sensitive to radiation and may need less radiation for high tumor control rates. PMID:23861469

  16. Method of controlled reduction of nitroaromatics by enzymatic reaction with oxygen sensitive nitroreductase enzymes

    DOEpatents

    Shah, M.M.; Campbell, J.A.

    1998-07-07

    A method is described for the controlled reduction of nitroaromatic compounds such as nitrobenzene and 2,4,6-trinitrotoluene by enzymatic reaction with oxygen sensitive nitroreductase enzymes, such as ferredoxin NADP oxidoreductase. 6 figs.

  17. Method of controlled reduction of nitroaromatics by enzymatic reaction with oxygen sensitive nitroreductase enzymes

    DOEpatents

    Shah, Manish M.; Campbell, James A.

    1998-01-01

    A method for the controlled reduction of nitroaromatic compounds such as nitrobenzene and 2,4,6-trinitrotoluene by enzymatic reaction with oxygen sensitive nitroreductase enzymes, such as ferredoxin NADP oxidoreductase.

  18. Oxygen deficiency hazards associated with liquefied gas systems development of a program of controls

    SciTech Connect

    Miller, T.M.; Mazur, P.O.

    1983-01-01

    The use of liquefied gases in industry and research has become commonplace. Release into the atmosphere of these gases, whether intentional or not, will result in a displacement of air and a reduction in the oxygen concentration. Exposure to reduced levels of oxygen levels may cause reduced abilities, unconsciousness, or death. This paper describes the derivation of a novel program of controls for oxygen deficiency hazards. The key to this approach is a quantitative assessment of risk for each planned operation and the application of control measures to reduce that risk to an acceptable level. Five risk levels evolve which are based on the probability of fatality. Controls such as training, oxygen monitoring equipment, self-rescue respirators, and medical surveillance are required when the probability of fatality exceeds 10/sup -7/ per hour. The quantitative nature of this program ensures an appropriate level of control without undue burden or expense. 11 references, 5 figures, 3 tables.

  19. Oxygen Concentration Controls Epigenetic Effects in Models of Familial Paraganglioma

    PubMed Central

    Her, Yeng F.; Nelson-Holte, Molly; Maher, Louis James

    2015-01-01

    Familial paraganglioma (PGL) is a rare neuroendocrine cancer associated with defects in the genes encoding the subunits of succinate dehydrogenase (SDH), a tricarboxylic acid (TCA) cycle enzyme. For unknown reasons, a higher prevalence of PGL has been reported for humans living at higher altitude, with increased disease aggressiveness and morbidity. In this study, we evaluate the effects of oxygen on epigenetic changes due to succinate accumulation in three SDH loss cell culture models. We test the hypothesis that the mechanism of α-ketoglutarate (α-KG)-dependent dioxygenase enzymes explains the inhibitory synergy of hypoxia and succinate accumulation. We confirm that SDH loss leads to profound succinate accumulation. We further show that hypoxia and succinate accumulation synergistically inhibit α-KG-dependent dioxygenases leading to increased stabilization of transcription factor HIF1α, HIF2α, and hypermethylation of histones and DNA. Increasing oxygen suppresses succinate inhibition of α-KG-dependent dioxygenases. This result provides a possible explanation for the association between hypoxia and PGL, and suggests hyperoxia as a potential novel therapy. PMID:25985299

  20. Determinants of the Higher Order Association of the Restriction Factor TRIM5α and Other Tripartite Motif (TRIM) Proteins*

    PubMed Central

    Li, Xing; Yeung, Darwin F.; Fiegen, Ann M.; Sodroski, Joseph

    2011-01-01

    Many tripartite motif (TRIM) proteins self-associate, forming dimers and higher order complexes. For example, dimers of TRIM5α, a host factor that restricts retrovirus infection, assemble into higher order arrays on the surface of the viral capsid, resulting in an increase in avidity. Here we show that the higher order association of different TRIM proteins exhibits a wide range of efficiencies. Homologous association (self-association) was more efficient than the heterologous association of different TRIM proteins, indicating that specificity determinants of higher order self-association exist. To investigate the structural determinants of higher order self-association, we studied TRIM mutants and chimeras. These studies revealed the following: 1) the RING domain contributes to the efficiency of higher order self-association, which enhances the binding of TRIM5α to the human immunodeficiency virus (HIV-1) capsid; 2) the RING and B-box 2 domains work together as a homologous unit to promote higher order association of dimers; 3) dimerization is probably required for efficient higher order self-association; 4) the Linker 2 region contributes to higher order self-association, independently of effects of Linker 2 changes on TRIM dimerization; and 5) for efficiently self-associating TRIM proteins, the B30.2(SPRY) domain is not required for higher order self-association. These results support a model in which both ends of the core TRIM dimer (RING-B-box 2 at one end and Linker 2 at the other) contribute to the formation of higher order arrays. PMID:21680743

  1. Regulation of respiration and fermentation to control the plant internal oxygen concentration.

    PubMed

    Zabalza, Ana; van Dongen, Joost T; Froehlich, Anja; Oliver, Sandra N; Faix, Benjamin; Gupta, Kapuganti Jagadis; Schmälzlin, Elmar; Igal, Maria; Orcaray, Luis; Royuela, Mercedes; Geigenberger, Peter

    2009-02-01

    Plant internal oxygen concentrations can drop well below ambient even when the plant grows under optimal conditions. Using pea (Pisum sativum) roots, we show how amenable respiration adapts to hypoxia to save oxygen when the oxygen availability decreases. The data cannot simply be explained by oxygen being limiting as substrate but indicate the existence of a regulatory mechanism, because the oxygen concentration at which the adaptive response is initiated is independent of the actual respiratory rate. Two phases can be discerned during the adaptive reaction: an initial linear decline of respiration is followed by a nonlinear inhibition in which the respiratory rate decreased progressively faster upon decreasing oxygen availability. In contrast to the cytochrome c pathway, the inhibition of the alternative oxidase pathway shows only the linear component of the adaptive response. Feeding pyruvate to the roots led to an increase of the oxygen consumption rate, which ultimately led to anoxia. The importance of balancing the in vivo pyruvate availability in the tissue was further investigated. Using various alcohol dehydrogenase knockout lines of Arabidopsis (Arabidopsis thaliana), it was shown that even under aerobic conditions, alcohol fermentation plays an important role in the control of the level of pyruvate in the tissue. Interestingly, alcohol fermentation appeared to be primarily induced by a drop in the energy status of the tissue rather than by a low oxygen concentration, indicating that sensing the energy status is an important component of optimizing plant metabolism to changes in the oxygen availability.

  2. Regulation of Respiration and Fermentation to Control the Plant Internal Oxygen Concentration1[OA

    PubMed Central

    Zabalza, Ana; van Dongen, Joost T.; Froehlich, Anja; Oliver, Sandra N.; Faix, Benjamin; Gupta, Kapuganti Jagadis; Schmälzlin, Elmar; Igal, Maria; Orcaray, Luis; Royuela, Mercedes; Geigenberger, Peter

    2009-01-01

    Plant internal oxygen concentrations can drop well below ambient even when the plant grows under optimal conditions. Using pea (Pisum sativum) roots, we show how amenable respiration adapts to hypoxia to save oxygen when the oxygen availability decreases. The data cannot simply be explained by oxygen being limiting as substrate but indicate the existence of a regulatory mechanism, because the oxygen concentration at which the adaptive response is initiated is independent of the actual respiratory rate. Two phases can be discerned during the adaptive reaction: an initial linear decline of respiration is followed by a nonlinear inhibition in which the respiratory rate decreased progressively faster upon decreasing oxygen availability. In contrast to the cytochrome c pathway, the inhibition of the alternative oxidase pathway shows only the linear component of the adaptive response. Feeding pyruvate to the roots led to an increase of the oxygen consumption rate, which ultimately led to anoxia. The importance of balancing the in vivo pyruvate availability in the tissue was further investigated. Using various alcohol dehydrogenase knockout lines of Arabidopsis (Arabidopsis thaliana), it was shown that even under aerobic conditions, alcohol fermentation plays an important role in the control of the level of pyruvate in the tissue. Interestingly, alcohol fermentation appeared to be primarily induced by a drop in the energy status of the tissue rather than by a low oxygen concentration, indicating that sensing the energy status is an important component of optimizing plant metabolism to changes in the oxygen availability. PMID:19098094

  3. Control of root growth and development by reactive oxygen species.

    PubMed

    Tsukagoshi, Hironaka

    2016-02-01

    Reactive oxygen species (ROS) are relatively simple molecules that exist within cells growing in aerobic conditions. ROS were originally associated with oxidative stress and seen as highly reactive molecules that are injurious to many cell components. More recently, however, the function of ROS as signal molecules in many plant cellular processes has become more evident. One of the most important functions of ROS is their role as a plant growth regulator. For example, ROS are key molecules in regulating plant root development, and as such, are comparable to plant hormones. In this review, the molecular mechanisms of ROS that are mainly associated with plant root growth are discussed. The molecular links between root growth regulation by ROS and other signals will also be briefly discussed.

  4. 12. DETAIL STUDY: THREE DIFFERENT TYPES OF WINDOW TRIM, RAKING ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    12. DETAIL STUDY: THREE DIFFERENT TYPES OF WINDOW TRIM, RAKING BRICK CORNICE AND SECOND FLOOR STRINGCOURSE. (Located at northwest corner of house) - Mulberry, Cooper River, West Branch, Moncks Corner, Berkeley County, SC

  5. 155. Credit ER. Hand cleaning and trimming of Coleman canal ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    155. Credit ER. Hand cleaning and trimming of Coleman canal after excavation by steam shovel. (ER, v. 64 1911 p. 701). - Battle Creek Hydroelectric System, Battle Creek & Tributaries, Red Bluff, Tehama County, CA

  6. 14. INTERIOR VIEW, DETAIL OF TRIMMED FLASH; FLASH IS EXCESS ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    14. INTERIOR VIEW, DETAIL OF TRIMMED FLASH; FLASH IS EXCESS METAL EXTRUDED BETWEEN THE DIES USED TO FORGE THE BLADE END OF THE POST HOLE DIGGER - Warwood Tool Company, Foot of Nineteenth Street, Wheeling, Ohio County, WV

  7. 20. photographer unknown undated EXCAVATION AND ROCK TRIMMING FOR LOCK ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    20. photographer unknown undated EXCAVATION AND ROCK TRIMMING FOR LOCK AND GATE SILL COMPLETED. - Bonneville Project, Navigation Lock No. 1, Oregon shore of Columbia River near first Powerhouse, Bonneville, Multnomah County, OR

  8. Remapping algorithms: application to trimming operations in sheet metal forming

    NASA Astrophysics Data System (ADS)

    Neto, D. M.; Diogo, C. M. A.; Neves, T. F.; Oliveira, M. C.; Alves, J. L.; Menezes, L. F.

    2016-08-01

    Most of sheet metal forming processes comprise intermediate trimming operations to remove superfluous material. These operations are required for subsequent forming operations. On the other hand, the springback is strongly influenced by the trimming operations that change the part stiffness and the stress field. From the numerical point of view, this involves the geometrical trimming of the finite element mesh and subsequent remapping of the state variables. This study presents a remapping method based on Dual Kriging interpolation, specifically developed for hexahedral finite elements, which has been implemented in DD3TRIM in-house code. Its performance is compared with the one of the Incremental Volumetric Remapping method, using the split-ring test to highlight their advantages and limitations. The numerical simulation of the forming processes is performed with DD3IMP finite element solver.

  9. 1. GENERAL VIEW. TRIM, ROOF AND STABLE DOORS ALL ARE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    1. GENERAL VIEW. TRIM, ROOF AND STABLE DOORS ALL ARE PAINTED RED. HEX SIGNS ARE PAINTED OCHRE, BLACK, RED, WHITE AND BLUE. NOTE PAINTED FLAGS ON SHED - Decorated White Barn, (Maiden Creek Township), Maiden Creek, Berks County, PA

  10. 32. TRIM SAWS IN BACKGROUND, VIEW FROM SOUTH WEST. NOTE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    32. TRIM SAWS IN BACKGROUND, VIEW FROM SOUTH WEST. NOTE WASTE CONVEYOR IN FOREGROUND, CANT ROLL CASE TO BEAM SAW, THEN ROLL CASE FROM EDGER IN MIDDLE GROUND. - Hull-Oakes Lumber Company, 23837 Dawson Road, Monroe, Benton County, OR

  11. Development of a multiple-step process for the microbial decontamination of beef trim.

    PubMed

    Kang, D H; Koohmaraie, M; Dorsa, W J; Siragusa, G R

    2001-01-01

    A multiple-hurdle antimicrobial process for beef trim was developed. The microbial profiles of inoculated lean beef trim tissue (BTL) and fat-covered lean beef trim (BTF) were monitored during prolonged refrigerated storage following the application of successive multiple antimicrobial treatments applied to inoculated beef trim on a processing conveyor belt set at a belt speed of 1 cm/s. Beef trim (meat size approximately 15 by 15 cm) was preinoculated with bovine feces before all treatments that included the following: control, no treatment; water wash at 65 psi for five passes; water plus lactic acid (2% [vol/vol] room temperature lactic acid wash at 30 psi for three passes); combination treatment 1 (water plus 65 degrees C hot water at 30 psi for one pass plus hot air at 510 degrees C for four passes plus lactic acid), combination treatment 2 (water plus hot water at 82 degrees C for one pass plus hot air at 510 degrees C for five passes plus lactic acid), and combination treatment 3 (water plus hot water at 82 degrees C for three passes plus hot air at 510 degrees C for six passes plus lactic acid). The effects of treatments on bacterial populations were monitored by enumerating mesophilic aerobic bacteria (APC), presumptive lactic acid bacteria (PLAB), psychrotrophic bacteria (PCT), coliforms, and Escherichia coli biotype 1 on product stored for up to 7 days at 4 degrees C. In the case of BTL, the numbers of APC, PCT, and PLAB increased during storage at 5 degrees C, whereas the numbers of coliform and E. coli decreased on average by 1.8 log CFU/cm2, then remained constant following the initial reduction. Negligible effects on color quality were observed from multihurdle treatment combination 1. In the case of the BTF, the microbial reductions by treatments were much greater than the reduction on BTL. The pH of treated BTF increased more slowly than the pH of treated BTL, resulting in further reduction of the microflora on BTF. Except for control and water

  12. Trimming the UCERF2 hazard logic tree

    USGS Publications Warehouse

    Porter, Keith A.; Field, Edward H.; Milner, Kevin

    2012-01-01

    The Uniform California Earthquake Rupture Forecast 2 (UCERF2) is a fully time‐dependent earthquake rupture forecast developed with sponsorship of the California Earthquake Authority (Working Group on California Earthquake Probabilities [WGCEP], 2007; Field et al., 2009). UCERF2 contains 480 logic‐tree branches reflecting choices among nine modeling uncertainties in the earthquake rate model shown in Figure 1. For seismic hazard analysis, it is also necessary to choose a ground‐motion‐prediction equation (GMPE) and set its parameters. Choosing among four next‐generation attenuation (NGA) relationships results in a total of 1920 hazard calculations per site. The present work is motivated by a desire to reduce the computational effort involved in a hazard analysis without understating uncertainty. We set out to assess which branching points of the UCERF2 logic tree contribute most to overall uncertainty, and which might be safely ignored (set to only one branch) without significantly biasing results or affecting some useful measure of uncertainty. The trimmed logic tree will have all of the original choices from the branching points that contribute significantly to uncertainty, but only one arbitrarily selected choice from the branching points that do not.

  13. Data trimming, nuclear emissions, and climate change.

    PubMed

    Shrader-Frechette, Kristin Sharon

    2009-03-01

    Ethics requires good science. Many scientists, government leaders, and industry representatives support tripling of global-nuclear-energy capacity on the grounds that nuclear fission is "carbon free" and "releases no greenhouse gases." However, such claims are scientifically questionable (and thus likely to lead to ethically questionable energy choices) for at least 3 reasons. (i) They rely on trimming the data on nuclear greenhouse-gas emissions (GHGE), perhaps in part because flawed Kyoto Protocol conventions require no full nuclear-fuel-cycle assessment of carbon content. (ii) They underestimate nuclear-fuel-cycle releases by erroneously assuming that mostly high-grade uranium ore, with much lower emissions, is used. (iii) They inconsistently compare nuclear-related GHGE only to those from fossil fuels, rather than to those from the best GHG-avoiding energy technologies. Once scientists take account of (i)-(iii), it is possible to show that although the nuclear fuel cycle releases (per kWh) much fewer GHG than coal and oil, nevertheless it releases far more GHG than wind and solar-photovoltaic. Although there may be other, ethical, reasons to support nuclear tripling, reducing or avoiding GHG does not appear to be one of them.

  14. Peak-Seeking Optimization of Trim for Reduced Fuel Consumption: Flight-Test Results

    NASA Technical Reports Server (NTRS)

    Brown, Nelson Andrew; Schaefer, Jacob Robert

    2013-01-01

    A peak-seeking control algorithm for real-time trim optimization for reduced fuel consumption has been developed by researchers at the National Aeronautics and Space Administration (NASA) Dryden Flight Research Center to address the goals of the NASA Environmentally Responsible Aviation project to reduce fuel burn and emissions. The peak-seeking control algorithm is based on a steepest-descent algorithm using a time-varying Kalman filter to estimate the gradient of a performance function of fuel flow versus control surface positions. In real-time operation, deflections of symmetric ailerons, trailing-edge flaps, and leading-edge flaps of an F/A-18 airplane (McDonnell Douglas, now The Boeing Company, Chicago, Illinois) are used for optimization of fuel flow. Results from six research flights are presented herein. The optimization algorithm found a trim configuration that required approximately 3 percent less fuel flow than the baseline trim at the same flight condition. The algorithm consistently rediscovered the solution from several initial conditions. These results show that the algorithm has good performance in a relevant environment.

  15. Peak-Seeking Optimization of Trim for Reduced Fuel Consumption: Flight-test Results

    NASA Technical Reports Server (NTRS)

    Brown, Nelson Andrew; Schaefer, Jacob Robert

    2013-01-01

    A peak-seeking control algorithm for real-time trim optimization for reduced fuel consumption has been developed by researchers at the National Aeronautics and Space Administration (NASA) Dryden Flight Research Center to address the goals of the NASA Environmentally Responsible Aviation project to reduce fuel burn and emissions. The peak-seeking control algorithm is based on a steepest-descent algorithm using a time-varying Kalman filter to estimate the gradient of a performance function of fuel flow versus control surface positions. In real-time operation, deflections of symmetric ailerons, trailing-edge flaps, and leading-edge flaps of an F/A-18 airplane (McDonnell Douglas, now The Boeing Company, Chicago, Illinois) are used for optimization of fuel flow. Results from six research flights are presented herein. The optimization algorithm found a trim configuration that required approximately 3 percent less fuel flow than the baseline trim at the same flight condition. The algorithm consistently rediscovered the solution from several initial conditions. These results show that the algorithm has good performance in a relevant environment.

  16. Ultralow oxygen treatment for postharvest control of Nasonovia ribisnigri (Homoptera: Aphididae) on iceberg lettuce.

    PubMed

    Liu, Yong-Biao

    2005-12-01

    The aphid Nasonovia ribisnigri (Mosley) is a common pest of lettuce in the United States. It hinders export of U.S. lettuce to the overseas market such as Japan where it is a quarantined pest. Ultralow oxygen treatments were studied for control of the insect on iceberg lettuce. Small-scale ultralow oxygen treatments in plastic jars were conducted at 1, 5, and 10 degrees C for different durations to determine effective treatment against nymphs and alates of N. ribisnigri. At oxygen levels of 0.015-0.025%, N. ribisnigri can be controlled in 3 d at 1 degrees C, 2 d at 5 degrees C, and 1 d at 10 degrees C. Large-scale ultralow oxygen treatments were conducted in bulk container treatment chambers with commercial iceberg lettuce heads for 2 d at 6 degrees C with oxygen levels of 0.015 and 0.025% and for 3 d at 3 degrees C with oxygen level of 0.015%. All treatments achieved complete control of N. ribisnigri. No negative impact on lettuce quality was detected after 2 wk of posttreatment storage. Therefore, the selected treatments have potential to be commercially developed for postharvest control of N. ribisnigri on iceberg lettuce. PMID:16539111

  17. Anoxygenic Photosynthesis Controls Oxygenic Photosynthesis in a Cyanobacterium from a Sulfidic Spring

    PubMed Central

    Al-Najjar, Mohammad A. A.; Yilmaz, Pelin; Lavik, Gaute; de Beer, Dirk; Polerecky, Lubos

    2015-01-01

    Before the Earth's complete oxygenation (0.58 to 0.55 billion years [Ga] ago), the photic zone of the Proterozoic oceans was probably redox stratified, with a slightly aerobic, nutrient-limited upper layer above a light-limited layer that tended toward euxinia. In such oceans, cyanobacteria capable of both oxygenic and sulfide-driven anoxygenic photosynthesis played a fundamental role in the global carbon, oxygen, and sulfur cycle. We have isolated a cyanobacterium, Pseudanabaena strain FS39, in which this versatility is still conserved, and we show that the transition between the two photosynthetic modes follows a surprisingly simple kinetic regulation controlled by this organism's affinity for H2S. Specifically, oxygenic photosynthesis is performed in addition to anoxygenic photosynthesis only when H2S becomes limiting and its concentration decreases below a threshold that increases predictably with the available ambient light. The carbon-based growth rates during oxygenic and anoxygenic photosynthesis were similar. However, Pseudanabaena FS39 additionally assimilated NO3− during anoxygenic photosynthesis. Thus, the transition between anoxygenic and oxygenic photosynthesis was accompanied by a shift of the C/N ratio of the total bulk biomass. These mechanisms offer new insights into the way in which, despite nutrient limitation in the oxic photic zone in the mid-Proterozoic oceans, versatile cyanobacteria might have promoted oxygenic photosynthesis and total primary productivity, a key step that enabled the complete oxygenation of our planet and the subsequent diversification of life. PMID:25576611

  18. Anoxygenic photosynthesis controls oxygenic photosynthesis in a cyanobacterium from a sulfidic spring.

    PubMed

    Klatt, Judith M; Al-Najjar, Mohammad A A; Yilmaz, Pelin; Lavik, Gaute; de Beer, Dirk; Polerecky, Lubos

    2015-03-01

    Before the Earth's complete oxygenation (0.58 to 0.55 billion years [Ga] ago), the photic zone of the Proterozoic oceans was probably redox stratified, with a slightly aerobic, nutrient-limited upper layer above a light-limited layer that tended toward euxinia. In such oceans, cyanobacteria capable of both oxygenic and sulfide-driven anoxygenic photosynthesis played a fundamental role in the global carbon, oxygen, and sulfur cycle. We have isolated a cyanobacterium, Pseudanabaena strain FS39, in which this versatility is still conserved, and we show that the transition between the two photosynthetic modes follows a surprisingly simple kinetic regulation controlled by this organism's affinity for H2S. Specifically, oxygenic photosynthesis is performed in addition to anoxygenic photosynthesis only when H2S becomes limiting and its concentration decreases below a threshold that increases predictably with the available ambient light. The carbon-based growth rates during oxygenic and anoxygenic photosynthesis were similar. However, Pseudanabaena FS39 additionally assimilated NO3 (-) during anoxygenic photosynthesis. Thus, the transition between anoxygenic and oxygenic photosynthesis was accompanied by a shift of the C/N ratio of the total bulk biomass. These mechanisms offer new insights into the way in which, despite nutrient limitation in the oxic photic zone in the mid-Proterozoic oceans, versatile cyanobacteria might have promoted oxygenic photosynthesis and total primary productivity, a key step that enabled the complete oxygenation of our planet and the subsequent diversification of life.

  19. Anoxygenic photosynthesis controls oxygenic photosynthesis in a cyanobacterium from a sulfidic spring.

    PubMed

    Klatt, Judith M; Al-Najjar, Mohammad A A; Yilmaz, Pelin; Lavik, Gaute; de Beer, Dirk; Polerecky, Lubos

    2015-03-01

    Before the Earth's complete oxygenation (0.58 to 0.55 billion years [Ga] ago), the photic zone of the Proterozoic oceans was probably redox stratified, with a slightly aerobic, nutrient-limited upper layer above a light-limited layer that tended toward euxinia. In such oceans, cyanobacteria capable of both oxygenic and sulfide-driven anoxygenic photosynthesis played a fundamental role in the global carbon, oxygen, and sulfur cycle. We have isolated a cyanobacterium, Pseudanabaena strain FS39, in which this versatility is still conserved, and we show that the transition between the two photosynthetic modes follows a surprisingly simple kinetic regulation controlled by this organism's affinity for H2S. Specifically, oxygenic photosynthesis is performed in addition to anoxygenic photosynthesis only when H2S becomes limiting and its concentration decreases below a threshold that increases predictably with the available ambient light. The carbon-based growth rates during oxygenic and anoxygenic photosynthesis were similar. However, Pseudanabaena FS39 additionally assimilated NO3 (-) during anoxygenic photosynthesis. Thus, the transition between anoxygenic and oxygenic photosynthesis was accompanied by a shift of the C/N ratio of the total bulk biomass. These mechanisms offer new insights into the way in which, despite nutrient limitation in the oxic photic zone in the mid-Proterozoic oceans, versatile cyanobacteria might have promoted oxygenic photosynthesis and total primary productivity, a key step that enabled the complete oxygenation of our planet and the subsequent diversification of life. PMID:25576611

  20. Elevated rate of fixation of endogenous retroviral elements in Haplorhini TRIM5 and TRIM22 genomic sequences: impact on transcriptional regulation.

    PubMed

    Diehl, William E; Johnson, Welkin E; Hunter, Eric

    2013-01-01

    All genes in the TRIM6/TRIM34/TRIM5/TRIM22 locus are type I interferon inducible, with TRIM5 and TRIM22 possessing antiviral properties. Evolutionary studies involving the TRIM6/34/5/22 locus have predominantly focused on the coding sequence of the genes, finding that TRIM5 and TRIM22 have undergone high rates of both non-synonymous nucleotide replacements and in-frame insertions and deletions. We sought to understand if divergent evolutionary pressures on TRIM6/34/5/22 coding regions have selected for modifications in the non-coding regions of these genes and explore whether such non-coding changes may influence the biological function of these genes. The transcribed genomic regions, including the introns, of TRIM6, TRIM34, TRIM5, and TRIM22 from ten Haplorhini primates and one prosimian species were analyzed for transposable element content. In Haplorhini species, TRIM5 displayed an exaggerated interspecies variability, predominantly resulting from changes in the composition of transposable elements in the large first and fourth introns. Multiple lineage-specific endogenous retroviral long terminal repeats (LTRs) were identified in the first intron of TRIM5 and TRIM22. In the prosimian genome, we identified a duplication of TRIM5 with a concomitant loss of TRIM22. The transposable element content of the prosimian TRIM5 genes appears to largely represent the shared Haplorhini/prosimian ancestral state for this gene. Furthermore, we demonstrated that one such differentially fixed LTR provides for species-specific transcriptional regulation of TRIM22 in response to p53 activation. Our results identify a previously unrecognized source of species-specific variation in the antiviral TRIM genes, which can lead to alterations in their transcriptional regulation. These observations suggest that there has existed long-term pressure for exaptation of retroviral LTRs in the non-coding regions of these genes. This likely resulted from serial viral challenges and provided a

  1. Interfacial control of oxygen vacancy doping and electrical conduction in thin film oxide heterostructures

    PubMed Central

    Veal, Boyd W.; Kim, Seong Keun; Zapol, Peter; Iddir, Hakim; Baldo, Peter M.; Eastman, Jeffrey A.

    2016-01-01

    Oxygen vacancies in proximity to surfaces and heterointerfaces in oxide thin film heterostructures have major effects on properties, resulting, for example, in emergent conduction behaviour, large changes in metal-insulator transition temperatures or enhanced catalytic activity. Here we report the discovery of a means of reversibly controlling the oxygen vacancy concentration and distribution in oxide heterostructures consisting of electronically conducting In2O3 films grown on ionically conducting Y2O3-stabilized ZrO2 substrates. Oxygen ion redistribution across the heterointerface is induced using an applied electric field oriented in the plane of the interface, resulting in controlled oxygen vacancy (and hence electron) doping of the film and possible orders-of-magnitude enhancement of the film's electrical conduction. The reversible modified behaviour is dependent on interface properties and is attained without cation doping or changes in the gas environment. PMID:27283250

  2. Oxygenated phosphine fumigation for control of Nasonovia ribisnigri (Homoptera: Aphididae) on harvested lettuce.

    PubMed

    Liu, Yong-Biao

    2012-06-01

    Low temperature regular phosphine fumigations under the normal oxygen level and oxygenated phosphine fumigations under superatmospheric oxygen levels were compared for efficacy against the aphid, Nasonovia ribisnigri (Mosley), and effects on postharvest quality of romaine and head lettuce. Low temperature regular phosphine fumigation was effective against the aphid. However, a 3 d treatment with high phosphine concentrations of > or = 2,000 ppm was needed for complete control of the aphid. Oxygen greatly increased phosphine toxicity and significantly reduced both treatment time and phosphine concentration for control of N. ribisnigri. At 1,000 ppm phosphine, 72 h regular fumigations at 6 degrees C did not achieve 100% mortality of the aphid. The 1,000 ppm phosphine fumigation under 60% O2 killed all aphids in 30 h. Both a 72 h regular fumigation with 2,200 ppm phosphine and a 48 h oxygenated fumigation with 1,000 ppm phosphine under 60% O2 were tested on romaine and head lettuce at 3 degrees C. Both treatments achieved complete control of N. ribisnigri. However, the 72 h regular fumigation resulted in significantly higher percentages of lettuce with injuries and significantly lower lettuce internal quality scores than the 48 h oxygenated phosphine fumigation. Although the oxygenated phosphine fumigation also caused injuries to some treated lettuce, lettuce quality remained very good and the treatment is not expected to have a significant impact on marketability of the lettuce. This study demonstrated that oxygenated phosphine fumigation was more effective and less phytotoxic for controlling N. ribisnigri on harvested lettuce than regular phosphine fumigation and is promising for practical use. PMID:22812116

  3. Fungal pretreatment of yard trimmings for enhancement of methane yield from solid-state anaerobic digestion.

    PubMed

    Zhao, Jia; Zheng, Yi; Li, Yebo

    2014-03-01

    Yard trimmings were pretreated by Ceriporiopsis subvermispora, a white-rot fungus that selectively degrades lignin, to enhance methane production via solid-state anaerobic digestion. Effects of moisture content (MC), at 45%, 60%, and 75%, on the degradation of holocellulose and lignin in the fungal pretreatment step and on methane production in the digestion step were studied with comparison to the control group (autoclaved without inoculation) and raw yard trimmings. It was found that C. subvermispora had a high lignin degradation of 20.9% but limited cellulose degradation of 7.4% at 60% MC. Consequently, samples pretreated at 60% MC achieved the highest methane yield of 44.6L/kg volatile solid (VS) in the digestion step, which was 106% and 154% higher than the control group (21.6L/kg VS) and the raw yard trimmings (17.6L/kg VS), respectively. The increase in methane production was probably caused by the degradation of lignin during the pretreatment.

  4. Evaluation of the UnTRIM model for 3-D tidal circulation

    USGS Publications Warehouse

    Cheng, R.T.; Casulli, V.; ,

    2001-01-01

    A family of numerical models, known as the TRIM models, shares the same modeling philosophy for solving the shallow water equations. A characteristic analysis of the shallow water equations points out that the numerical instability is controlled by the gravity wave terms in the momentum equations and by the transport terms in the continuity equation. A semi-implicit finite-difference scheme has been formulated so that these terms and the vertical diffusion terms are treated implicitly and the remaining terms explicitly to control the numerical stability and the computations are carried out over a uniform finite-difference computational mesh without invoking horizontal or vertical coordinate transformations. An unstructured grid version of TRIM model is introduced, or UnTRIM (pronounces as "you trim"), which preserves these basic numerical properties and modeling philosophy, only the computations are carried out over an unstructured orthogonal grid. The unstructured grid offers the flexibilities in representing complex study areas so that fine grid resolution can be placed in regions of interest, and coarse grids are used to cover the remaining domain. Thus, the computational efforts are concentrated in areas of importance, and an overall computational saving can be achieved because the total number of grid-points is dramatically reduced. To use this modeling approach, an unstructured grid mesh must be generated to properly reflect the properties of the domain of the investigation. The new modeling flexibility in grid structure is accompanied by new challenges associated with issues of grid generation. To take full advantage of this new model flexibility, the model grid generation should be guided by insights into the physics of the problems; and the insights needed may require a higher degree of modeling skill.

  5. Numerical analysis of the primary processes controlling oxygen dynamics on the Louisiana shelf

    NASA Astrophysics Data System (ADS)

    Yu, L.; Fennel, K.; Laurent, A.; Murrell, M. C.; Lehrter, J. C.

    2015-04-01

    The Louisiana shelf, in the northern Gulf of Mexico, receives large amounts of freshwater and nutrients from the Mississippi-Atchafalaya river system. These river inputs contribute to widespread bottom-water hypoxia every summer. In this study, we use a physical-biogeochemical model that explicitly simulates oxygen sources and sinks on the Louisiana shelf to identify the key mechanisms controlling hypoxia development. First, we validate the model simulation against observed dissolved oxygen concentrations, primary production, water column respiration, and sediment oxygen consumption. In the model simulation, heterotrophy is prevalent in shelf waters throughout the year, except near the mouths of the Mississippi and Atchafalaya rivers, where primary production exceeds respiratory oxygen consumption during June and July. During this time, efflux of oxygen to the atmosphere, driven by photosynthesis and surface warming, becomes a significant oxygen sink. A substantial fraction of primary production occurs below the pycnocline in summer. We investigate whether this primary production below the pycnocline is mitigating the development of hypoxic conditions with the help of a sensitivity experiment where we disable biological processes in the water column (i.e., primary production and water column respiration). With this experiment we show that below-pycnocline primary production reduces the spatial extent of hypoxic bottom waters only slightly. Our results suggest that the combination of physical processes (advection and vertical diffusion) and sediment oxygen consumption largely determine the spatial extent and dynamics of hypoxia on the Louisiana shelf.

  6. Numerical analysis of the primary processes controlling oxygen dynamics on the Louisiana Shelf

    NASA Astrophysics Data System (ADS)

    Yu, L.; Fennel, K.; Laurent, A.; Murrell, M. C.; Lehrter, J. C.

    2014-10-01

    The Louisiana shelf in the northern Gulf of Mexico receives large amounts of freshwater and nutrients from the Mississippi/Atchafalaya River system. These river inputs contribute to widespread bottom-water hypoxia every summer. In this study, we use a physical-biogeochemical model that explicitly simulates oxygen sources and sinks on the Louisiana shelf to identify the key mechanisms controlling hypoxia development. First, we validate the model simulation against observed dissolved oxygen concentrations, primary production, water column respiration, and sediment oxygen consumption. In the model simulation, heterotrophy is prevalent in shelf waters throughout the year except near the mouths of the Mississippi and Atchafalaya Rivers where primary production exceeds respiratory oxygen consumption during June and July. During this time, efflux of oxygen to the atmosphere, driven by photosynthesis and surface warming, becomes a significant oxygen sink while the well-developed pycnocline isolates autotrophic surface waters from the heterotrophic and hypoxic waters below. A substantial fraction of primary production occurs below the pycnocline in summer. We investigate whether this primary production below the pycnocline is mitigating the development of hypoxic conditions with the help of a sensitivity experiment where we disable biological processes in the water column (i.e. primary production and water column respiration). In this experiment below-pycnocline primary production reduces the spatial extent of hypoxic bottom waters only slightly. Our results suggest that the combination of physical processes and sediment oxygen consumption largely determine the spatial extent and dynamics of hypoxia on the Louisiana shelf.

  7. TRIM52 inhibits Japanese Encephalitis Virus replication by degrading the viral NS2A

    PubMed Central

    Fan, Wenchun; Wu, Mengge; Qian, Suhong; Zhou, Yun; Chen, Huanchun; Li, Xiangmin; Qian, Ping

    2016-01-01

    The members of tripartite-motif containing (TRIM) protein participate in various cellular processes and play an important role in host antiviral function. TRIM proteins exert their antiviral activity either directly by degrading viral proteins through their E3 ligase activity, or indirectly by promoting host innate immunity. This study demonstrated for the first time that TRIM52 is a novel antiviral TRIM protein against Japanese encephalitis virus (JEV) infection. Overexpression of TRIM52 restricted JEV replication in BHK-21 and 293T cells. In addition, JEV nonstructural protein 2A (NS2A) is a protein that interacts with TRIM52. Their interaction degraded NS2A in a proteasome-dependent manner via the E3 ligase activity of TRIM52. Thus, TRIM52 is a novel antiviral TRIM protein, and it exerted antiviral activity against JEV infection by targeting and degrading viral NS2A. PMID:27667714

  8. Modeling, simulation, and high-autonomy control of a Martian oxygen production plant

    NASA Technical Reports Server (NTRS)

    Schooley, L. C.; Cellier, F. E.; Wang, F.-Y.; Zeigler, B. P.

    1992-01-01

    Progress on a project for the development of a high-autonomy intelligent command and control architecture for process plants used to produce oxygen from local planetary resources is reported. A distributed command and control architecture is being developed and implemented so that an oxygen production plant, or other equipment, can be reliably commanded and controlled over an extended time period in a high-autonomy mode with high-level task-oriented teleoperation from one or several remote locations. During the reporting period, progress was made at all levels of the architecture. At the remote site, several remote observers can now participate in monitoring the plant. At the local site, a command and control center was introduced for increased flexibility, reliability, and robustness. The local control architecture was enhanced to control multiple tubes in parallel, and was refined for increased robustness. The simulation model was enhanced to full dynamics descriptions.

  9. Trimming the threshold dispersion below 10 e-rms in a large area readout IC working in a single photon counting mode

    NASA Astrophysics Data System (ADS)

    Kmon, P.; Maj, P.; Gryboś, P.; Szczygieł, R.

    2016-01-01

    We present a new method of an in-pixel threshold dispersion correction implemented in a prototype readout integrated circuit (IC) operating in a single photon counting mode. The new threshold correction method was implemented in a readout IC of area 9.6× 14.9 mm2 containing 23552 square pixels with the pitch of 75 μm designed and fabricated in CMOS 130 nm technology. Each pixel of the IC consists of a charge sensitive amplifier, a shaper, two discriminators, two 14-bit counters and a low-area trim DACs for threshold correction. The user can either control the range of the trim DAC globally for all the pixels in the integrated circuit or modify the trim DACs characteristics locally in each pixel independently. Using a simulation tool based on the Monte-Carlo methods, we estimated how much we could improve the offset trimming by increasing the number of bits in the trim DACs or implementing additional bits in a pixel to modify the characteristics of the trim DACs. The measurements of our IC prototype show that it is possible to reduce the effective threshold dispersion in large-area single-photon counting chips below 10 electrons rms.

  10. Trimming a Metallic Biliary Stent Using an Argon Plasma Coagulator

    SciTech Connect

    Rerknimitr, Rungsun Naprasert, Pisit; Kongkam, Pradermchai; Kullavanijaya, Pinit

    2007-06-15

    Background. Distal migration is one of the common complications after insertion of a covered metallic stent. Stent repositioning or removal is not always possible in every patient. Therefore, trimming using an argon plasma coagulator (APC) may be a good alternative method to solve this problem. Methods. Metallic stent trimming by APC was performed in 2 patients with biliary Wallstent migration and in another patient with esophageal Ultraflex stent migration. The power setting was 60-100 watts with an argon flow of 0.8 l/min. Observations. The procedure was successfully performed and all distal parts of the stents were removed. No significant collateral damage to the nearby mucosa was observed. Conclusions. In a patient with a distally migrated metallic stent, trimming of the stent is possible by means of an APC. This new method may be applicable to other sites of metallic stent migration.

  11. Role of the Cephalic Trim in Modern Rhinoplasty.

    PubMed

    Nagarkar, Purushottam; Stark, Ran Y; Pezeshk, Ronnie A; Amirlak, Bardia; Rohrich, Rod J

    2016-01-01

    There have been a variety of techniques describing nasal tip refinement. The cephalic trim has long been accepted as a means for shaping the nasal tip, but it has been misinterpreted by many surgeons. The improper use of a cephalic trim poses potential long-term sequelae. During analysis of the nasal tip, several anatomic findings must be noted to ensure appropriate correction as well as to avoid pitfalls. These findings include the type of boxy tip or bulbous tip, cartilage strength, and the skin quality. The goal of this article is to describe five types of cephalic trim techniques to assist in refining the nasal tip and an algorithm for selection of the appropriate technique based on these anatomic findings. PMID:26710011

  12. Aeroelastic Analysis of a Trimmed Generic Hypersonic Vehicle

    NASA Technical Reports Server (NTRS)

    Nydick, I.; Friedmann, P. P.

    1999-01-01

    The aeroelastic equations of motion governing a hypersonic vehicle in free flight are derived. The equations of motion for a translating and rotating flexible body using Lagrange's equations in terms of quasi-coordinates are presented. These equations are simplified for the case of a vehicle with pitch and plunge rigid body degrees of freedom and small elastic displacements. The displacements are approximated by a truncated series of the unrestrained mode shapes, which are obtained using equivalent plate theory. Subsequently, the nonlinear equations of motion are linearized about the trim state, which is obtained using a rigid body trim model and steady hypersonic aerodynamics. The appropriate flutter derivatives are calculated from piston theory. Results describing mode shapes, trim behavior, and aeroelastic stability of a generic hypersonic vehicle are presented.

  13. Oxygen control of breathing by an olfactory receptor activated by lactate

    PubMed Central

    Chang, Andy J.; Ortega, Fabian E.; Riegler, Johannes; Madison, Daniel V.; Krasnow, Mark A.

    2015-01-01

    Summary Animals have evolved homeostatic responses to changes in oxygen availability that act on different time scales. Although the hypoxia-inducible factor (HIF) transcriptional pathway that controls long term responses to low oxygen (hypoxia) has been established1, the pathway that mediates acute responses to hypoxia in mammals is not well understood. Here we show that the olfactory receptor Olfr78 is highly and selectively expressed in oxygen-sensitive glomus cells of the carotid body, a chemosensory organ at the carotid artery bifurcation that monitors blood oxygen and stimulates breathing within seconds when oxygen declines2. Olfr78 mutants fail to increase ventilation in hypoxia but respond normally to hypercapnia. Glomus cells are present in normal numbers and appear structurally intact, but hypoxia-induced carotid body activity is diminished. Lactate, a metabolite that rapidly accumulates in hypoxia and induces hyperventilation3–6, activates Olfr78 in heterologous expression experiments, induces calcium transients in glomus cells, and stimulates carotid sinus nerve activity through Olfr78. We propose that in addition to its role in olfaction, Olfr78 acts as a hypoxia sensor in the breathing circuit by sensing lactate produced when oxygen levels decline. PMID:26560302

  14. Ultralow oxygen treatment for control of Latrodectus hesperus (Araneae: Theridiidae) on harvested table grapes.

    PubMed

    Liu, Yong-Biao; Daane, Kent M; Tebbets, J Steve; Bettiga, Larry J

    2008-10-01

    The spider Latrodectus hesperus Chamberlin & Ivie (Araneae: Theridiidae) was subjected to low and ultralow oxygen (ULO) treatments at different temperatures. Complete control of the spiders was achieved in 24-h ULO treatments with 0.5% O2 or lower at 1 degrees C and in a 24-h low oxygen (2%) treatment at 15 degrees C. Oxygen level and temperature greatly affected spider mortality. At 1 degrees C, as oxygen level was decreased from 2 to 0.5%, spider mortality increased from 0 to 100%. At 2% O2, as temperature was increased from 1 to 15 degrees C, spider mortality increased from 0 to 100%. Grape clusters from two table grape (Vitis spp.) cultivars, 'Thompson Seedless' and 'Flame Seedless', were subjected to the 24-h ULO treatment with 0.5% O2 at 1 degrees C. The ULO treatment had no negative effects on grape quality. Because of the relatively short treatment time, effectiveness at low storage temperature and the easily attained oxygen level, we conclude that the ULO treatment have good potential to be implemented commercially for control of black widow spiders on harvested table grapes. PMID:18950031

  15. Controls on ostracod valve geochemistry: Part 2. Carbon and oxygen isotope compositions

    NASA Astrophysics Data System (ADS)

    Decrouy, Laurent; Vennemann, Torsten Walter; Ariztegui, Daniel

    2011-11-01

    The stable carbon and oxygen isotope compositions of fossil ostracods are powerful tools to estimate past environmental and climatic conditions. The basis for such interpretations is that the calcite of the valves reflects the isotopic composition of water and its temperature of formation. However, calcite of ostracods is known not to form in isotopic equilibrium with water and different species may have different offsets from inorganic precipitates of calcite formed under the same conditions. To estimate the fractionation during ostracod valve calcification, the oxygen and carbon isotope compositions of 15 species living in Lake Geneva were related to their autoecology and the environmental parameters measured during their growth. The results indicate that: (1) Oxygen isotope fractionation is similar for all species of Candoninae with an enrichment in 18O of more than 3‰ relative to equilibrium values for inorganic calcite. Oxygen isotope fractionation for Cytheroidea is less discriminative relative to the heavy oxygen, with enrichments in 18O for these species of 1.7 to 2.3‰. Oxygen isotope fractionations for Cyprididae are in-between those of Candoninae and Cytheroidea. The difference in oxygen isotope fractionation between ostracods and inorganic calcite has been interpreted as resulting from a vital effect. (2) Comparison with previous work suggests that oxygen isotope fractionation may depend on the total and relative ion content of water. (3) Carbon isotope compositions of ostracod valves are generally in equilibrium with DIC. The specimens' δ 13C values are mainly controlled by seasonal variations in δ 13C DIC of bottom water or variation thereof in sediment pore water. (4) Incomplete valve calcification has an effect on carbon and oxygen isotope compositions of ostracod valves. Preferential incorporation of CO32- at the beginning of valve calcification may explain this effect. (5) Results presented here as well as results from synthetic carbonate

  16. Ultralow oxygen treatment for control of Planococcus ficus (Hemiptera: Pseudococcidae) on grape benchgrafts.

    PubMed

    Liu, Yong-Biao; Bettiga, Larry J; Daane, Kent M

    2010-04-01

    Controlled atmosphere treatments with ultralow oxygen (ULO treatments) were developed successfully for control of vine mealybug, Planococcusflcus Signoret (Hemiptera: Pseudococcidae), on dormant grape (Vitis spp.) benchgrafts. At 30 ppm oxygen, 3-d ULO treatment at 25 degrees C and 4-d ULO treatment at 150C achieved complete control of all life stages of P. ficus. At a much lower oxygen level (<1 ppm), the two ULO treatments with the same exposure periods of 3 d at 25 degrees C and 4 d at 15 degrees C were tested on six table and wine grape cultivars grafted on rootstocks along with P. ficus. The benchgrafts were then potted in a greenhouse, together with untreated controls, to determine treatment effects on rootstock viability. Both ULO treatments achieved complete control of P. ficus and did not have any negative effects on vine growth, compared with the control. Results indicate that ULO treatments can be used to control P. ficus on dormant grape benchgrafts. The advantages of the ULO treatments are also discussed with respect to hot water treatments.

  17. Spatial and Temporal Distribution of Escherichia coli on Beef Trimmings Obtained from a Beef Packing Plant.

    PubMed

    Visvalingam, Jeyachchandran; Wang, Hui; Youssef, Mohamed K; Devos, Julia; Gill, Colin O; Yang, Xianqin

    2016-08-01

    The objective of this study was to determine the immediate source of Escherichia coli on beef trimmings produced at a large packing plant by analyzing the E. coli on trimmings at various locations of a combo bin filled on the same day and of bins filled on different days. Ten 2,000-lb (907-kg) combo bins (B1 through B10) of trimmings were obtained from a large plant on 6 days over a period of 5 weeks. Thin slices of beef with a total area of approximately 100 cm(2) were excised from five locations (four corners and the center) at each of four levels of the bins: the top surface and 30, 60, and 90 cm below the top. The samples were enriched for E. coli in modified tryptone soya broth supplemented with 20 mg/liter novobiocin. The positive enrichment cultures, as determined by PCR, were plated on E. coli/coliform count plates for recovery of E. coli. Selected E. coli isolates were genotyped using multiple-locus variable-number tandem repeat analysis (MLVA). Of the 200 enrichment cultures, 43 were positive by PCR for E. coli, and 32 of these cultures yielded E. coli isolates. Two bins did not yield any positive enrichment cultures, and three PCR-positive bins did not yield any E. coli isolates. MLVA of 165 E. coli isolates (30, 62, 56, 5, and 12 from B6 through B10, respectively) revealed nine distinct genotypes. MLVA types 263 and 89 were most prevalent overall and on individual days, accounting for 49.1 and 37.6% of the total isolates, respectively. These two genotypes were also found at multiple locations within a bin. All nine genotypes belonged to the phylogenetic group A0 of E. coli, suggesting an animal origin. The finding that the trimmings carried very few E. coli indicates an overall effective control over contamination of beef with E. coli at this processing plant. The lack of strain diversity of the E. coli on trimmings suggests that most E. coli isolates may have come from common sources, most likely equipment used in the fabrication process.

  18. Peak-Seeking Optimization of Trim for Reduced Fuel Consumption: Architecture and Performance Predictions

    NASA Technical Reports Server (NTRS)

    Schaefer, Jacob; Brown, Nelson A.

    2013-01-01

    A peak-seeking control approach for real-time trim configuration optimization for reduced fuel consumption has been developed by researchers at the National Aeronautics and Space Administration (NASA) Dryden Flight Research Center to address the goals of the NASA Environmentally Responsible Aviation project to reduce fuel burn and emissions. The peak-seeking control approach is based on a steepest-descent algorithm using a time-varying Kalman filter to estimate the gradient of a performance function of fuel flow versus control surface positions. In real-time operation, deflections of symmetric ailerons, trailing-edge flaps, and leading-edge flaps of an F/A-18 airplane (McDonnell Douglas, now The Boeing Company, Chicago, Illinois) are controlled for optimization of fuel flow. This paper presents the design and integration of this peak-seeking controller on a modified NASA F/A-18 airplane with research flight control computers. A research flight was performed to collect data to build a realistic model of the performance function and characterize measurement noise. This model was then implemented into a nonlinear six-degree-of-freedom F/A-18 simulation along with the peak-seeking control algorithm. With the goal of eventual flight tests, the algorithm was first evaluated in the improved simulation environment. Results from the simulation predict good convergence on minimum fuel flow with a 2.5-percent reduction in fuel flow relative to the baseline trim of the aircraft.

  19. Peak-Seeking Optimization of Trim for Reduced Fuel Consumption: Architecture and Performance Predictions

    NASA Technical Reports Server (NTRS)

    Schaefer, Jacob; Brown, Nelson

    2013-01-01

    A peak-seeking control approach for real-time trim configuration optimization for reduced fuel consumption has been developed by researchers at the National Aeronautics and Space Administration (NASA) Dryden Flight Research Center to address the goals of the NASA Environmentally Responsible Aviation project to reduce fuel burn and emissions. The peak-seeking control approach is based on a steepest-descent algorithm using a time-varying Kalman filter to estimate the gradient of a performance function of fuel flow versus control surface positions. In real-time operation, deflections of symmetric ailerons, trailing-edge flaps, and leading-edge flaps of an FA-18 airplane (McDonnell Douglas, now The Boeing Company, Chicago, Illinois) are controlled for optimization of fuel flow. This presentation presents the design and integration of this peak-seeking controller on a modified NASA FA-18 airplane with research flight control computers. A research flight was performed to collect data to build a realistic model of the performance function and characterize measurement noise. This model was then implemented into a nonlinear six-degree-of-freedom FA-18 simulation along with the peak-seeking control algorithm. With the goal of eventual flight tests, the algorithm was first evaluated in the improved simulation environment. Results from the simulation predict good convergence on minimum fuel flow with a 2.5-percent reduction in fuel flow relative to the baseline trim of the aircraft.

  20. Scaling-Free Electrochemical Production of Caustic and Oxygen for Sulfide Control in Sewers.

    PubMed

    Lin, Hui-Wen; Rabaey, Korneel; Keller, Jürg; Yuan, Zhiguo; Pikaar, Ilje

    2015-10-01

    Caustic shock-loading and oxygen injection are commonly used by the water industry for biofilm and sulfide control in sewers. Caustic can be produced onsite from wastewater using a two-compartment electrochemical cell. This avoids the need for import and storage of caustic soda, which typically represents a cost and a hazard. An issue limiting the practical implementation of this approach is the occurrence of membrane scaling due to the almost universal presence of Ca(2+) and Mg(2+) in wastewater. It results in a rapid increase in the cell voltage, thereby increasing the energy consumption of the system. Here, we propose and experimentally demonstrate an innovative solution for this problem involving the inclusion of a middle compartment between the anode and cathode compartments. Caustic was efficiently produced from wastewater over a period of 12 weeks and had an average Coulombic efficiency (CE) of 84.1 ± 1.1% at practically relevant caustic strengths (∼3 wt %). Neither membrane scaling nor an increase in the cell voltage was observed throughout the experiments. In addition, dissolved oxygen was produced in the anode, resulting in continuously oxygenated wastewater leaving the three-compartment cell. This membrane-scaling control strategy represents a major step forward toward practical implementation of on-site simultaneous electrochemical caustic and oxygen generation for sulfide control in sewers and also has the potential to be applied to other (bio)electrochemical systems receiving wastewater as source for product recovery.

  1. Structural and electronic response via oxygen vacancy control in SrFeO3 heterostructures

    NASA Astrophysics Data System (ADS)

    Krick, Alex; Moon, Eun Ju; Huon, Amanda; May, Steven

    The electronic and structural properties of complex perovskite oxide thin films are often directly influenced by their oxygen vacancy concentration. Here, we investigate epitaxial films of SrFeO3, which exhibits a variety of structural and electronic phases as a function of oxygen content. The ability to control these functional properties via temperature or external fields is not present in conventional semiconductors and is attractive from an application perspective. As-grown films are oxidized using a post-growth anneal in dilute ozone, yielding metallic behavior consistent with bulk SrFeO3. X-ray diffraction and temperature dependent resistivity collected at different stages of oxidation and reduction reveal minute structural transformations that yield large changes in electronic behavior due to oxygen loss.

  2. Effect of nitroimidazoles on the oxygen consumption rate and respiratory control ratio of beef heart mitochondria

    SciTech Connect

    Chao, C.F.; Ting, L.; Subjeck, J.R.; Johnson, R.J.

    1984-08-01

    The neurotoxic effect of the nitroimidazole radiosensitizers misonidazole (MISO) and desmethylmisonidazole (DMM) has seriously compromised their clinical effectiveness. The authors compare here the effect of MISO and DMM on oxygen consumption in purified beef heart mitochondria. MISO has been found to significantly increase the oxygen consumption rate and decrease the respiratory control ratio in isolated mitochondria when incubated in the presence of the NAD+ dependent substrate, ..beta..-hydroxybutyrate. DMM has a similar but less pronounced effect than MISO on these respiratory parameters. When mitochondria were incubated in the presence of these radiosensitizers for 8, 15, 30, 45, and 60 minutes, the oxygen consumption rate was decreased when succinate, a FAD dependent substrate, was added following the incubation. This decrease, which is both time and dosage dependent, is equivalent for MISO and DMM.

  3. Quality Controlled Argo Profiling Float Oxygen Data: Open Source Sharing and Version Control Using IPython Notebooks on GitHub

    NASA Astrophysics Data System (ADS)

    Sakamoto, C.; McCann, M. P.; Plant, J. N.; Johnson, K. S.

    2015-12-01

    Profiling floats equipped with biogeochemical sensors are an ideal platform for observing the seasonal evolution of physical and chemical processes from the surface to the deep interior. As of August 2015, there have reportedly been 765 floats equipped with oxygen sensors with 363 currently active. Although new insights into oceanic biogeochemical processes have come from these data, the profiling oxygen data set has not been fully utilized because the dissolved oxygen data does not undergo QC procedures at the Argo data centers. The oxygen sensors on profiling floats have been demonstrated to produce highly stable and precise data over many months and years but only a small percentage have been verified with discrete samples taken at deployment to determine the sensor accuracy. Takeshita et al (2013) presented a climatology based quality control procedure utilizing the World Ocean Atlas 2009 (WOA09). We used a straightforward approach mentioned in their paper to calculate the sensor gain by comparing the surface %Sat(float) to the surface %Sat(WOA09) using > 1 year of data. We have developed Python scripts to provide QC'd data that are freely available and easily shared using IPython Notebooks hosted on GitHub. We will examine the consistency of the corrected oxygen data set, relative to existing climatologies, and its use in oceanographic studies.

  4. An aeration control strategy for oxidation ditch processes based on online oxygen requirement estimation.

    PubMed

    Zhan, J X; Ikehata, M; Mayuzumi, M; Koizumi, E; Kawaguchi, Y; Hashimoto, T

    2013-01-01

    A feedforward-feedback aeration control strategy based on online oxygen requirements (OR) estimation is proposed for oxidation ditch (OD) processes, and it is further developed for intermittent aeration OD processes, which are the most popular type in Japan. For calculating OR, concentrations of influent biochemical oxygen demand (BOD) and total Kjeldahl nitrogen (TKN) are estimated online by the measurement of suspended solids (SS) and sometimes TKN is estimated by NH4-N. Mixed liquor suspended solids (MLSS) and temperature are used to estimate the required oxygen for endogenous respiration. A straightforward parameter named aeration coefficient, Ka, is introduced as the only parameter that can be tuned automatically by feedback control or manually by the operators. Simulation with an activated sludge model was performed in comparison to fixed-interval aeration and satisfying result of OR control strategy was obtained. The OR control strategy has been implemented at seven full-scale OD plants and improvements in nitrogen removal are obtained in all these plants. Among them, the results obtained in Yumoto wastewater treatment plant were presented, in which continuous aeration was applied previously. After implementing intermittent OR control, the total nitrogen concentration was reduced from more than 5 mg/L to under 2 mg/L, and the electricity consumption was reduced by 61.2% for aeration or 21.5% for the whole plant. PMID:23823542

  5. Astronaut Owen Garriott trims hair of Astronaut Alan Bean

    NASA Technical Reports Server (NTRS)

    1973-01-01

    Scientist-Astronaut Owen K. Garriott, Skylab 3 science pilot, trims the hair of Astronaut Alan L. Bean, commander, in this on-board photograph from the Skylab Orbital Workshop (OWS). Bean holds a vacuum hose to gather in loose hair.

  6. 33 CFR 401.30 - Ballast water and trim.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 3 2014-07-01 2014-07-01 false Ballast water and trim. 401.30... OF TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.30 Ballast water... exclusive economic zone must agree to comply with the “Code of Best Practices for Ballast Water...

  7. 33 CFR 401.30 - Ballast water and trim.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 3 2010-07-01 2010-07-01 false Ballast water and trim. 401.30... OF TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.30 Ballast water... exclusive economic zone must agree to comply with the “Code of Best Practices for Ballast Water...

  8. 33 CFR 401.30 - Ballast water and trim.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 3 2011-07-01 2011-07-01 false Ballast water and trim. 401.30... OF TRANSPORTATION SEAWAY REGULATIONS AND RULES Regulations Seaway Navigation § 401.30 Ballast water... exclusive economic zone must agree to comply with the “Code of Best Practices for Ballast Water...

  9. 7 CFR 58.725 - Trimming and cleaning.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ..., GENERAL SPECIFICATIONS FOR APPROVED PLANTS AND STANDARDS FOR GRADES OF DAIRY PRODUCTS 1 General Specifications for Dairy Plants Approved for USDA Inspection and Grading Service 1 Operations and Operating Procedures § 58.725 Trimming and cleaning. The natural cheese shall be cleaned free of all...

  10. 7 CFR 58.725 - Trimming and cleaning.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ..., GENERAL SPECIFICATIONS FOR APPROVED PLANTS AND STANDARDS FOR GRADES OF DAIRY PRODUCTS 1 General Specifications for Dairy Plants Approved for USDA Inspection and Grading Service 1 Operations and Operating Procedures § 58.725 Trimming and cleaning. The natural cheese shall be cleaned free of all...

  11. 7 CFR 51.585 - Fairly well trimmed.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Fairly well trimmed. 51.585 Section 51.585 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  12. 7 CFR 51.585 - Fairly well trimmed.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 2 2011-01-01 2011-01-01 false Fairly well trimmed. 51.585 Section 51.585 Agriculture Regulations of the Department of Agriculture AGRICULTURAL MARKETING SERVICE (Standards, Inspections, Marketing Practices), DEPARTMENT OF AGRICULTURE REGULATIONS AND STANDARDS UNDER THE AGRICULTURAL MARKETING ACT OF...

  13. 30 CFR 57.9314 - Trimming stockpile and muckpile faces.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 30 Mineral Resources 1 2014-07-01 2014-07-01 false Trimming stockpile and muckpile faces. 57.9314 Section 57.9314 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR METAL AND NONMETAL MINE SAFETY AND HEALTH SAFETY AND HEALTH STANDARDS-UNDERGROUND METAL AND NONMETAL MINES...

  14. 30 CFR 57.9314 - Trimming stockpile and muckpile faces.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 30 Mineral Resources 1 2013-07-01 2013-07-01 false Trimming stockpile and muckpile faces. 57.9314 Section 57.9314 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR METAL AND NONMETAL MINE SAFETY AND HEALTH SAFETY AND HEALTH STANDARDS-UNDERGROUND METAL AND NONMETAL MINES...

  15. 30 CFR 57.9314 - Trimming stockpile and muckpile faces.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Trimming stockpile and muckpile faces. 57.9314 Section 57.9314 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR METAL AND NONMETAL MINE SAFETY AND HEALTH SAFETY AND HEALTH STANDARDS-UNDERGROUND METAL AND NONMETAL MINES...

  16. 30 CFR 57.9314 - Trimming stockpile and muckpile faces.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 30 Mineral Resources 1 2011-07-01 2011-07-01 false Trimming stockpile and muckpile faces. 57.9314 Section 57.9314 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR METAL AND NONMETAL MINE SAFETY AND HEALTH SAFETY AND HEALTH STANDARDS-UNDERGROUND METAL AND NONMETAL MINES...

  17. 30 CFR 57.9314 - Trimming stockpile and muckpile faces.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 30 Mineral Resources 1 2012-07-01 2012-07-01 false Trimming stockpile and muckpile faces. 57.9314 Section 57.9314 Mineral Resources MINE SAFETY AND HEALTH ADMINISTRATION, DEPARTMENT OF LABOR METAL AND NONMETAL MINE SAFETY AND HEALTH SAFETY AND HEALTH STANDARDS-UNDERGROUND METAL AND NONMETAL MINES...

  18. Methods for precisely trimming block faces for ultramicrotomy.

    PubMed

    Gorycki, M A

    1978-03-01

    Two devices are described to aid in trimming block faces of embedded tissue for ultramicrotomy. The first, a reticle to fit the ocular of a stereomicroscope, can be manufactured by the ultramicrotomist and is designed to outline the edges of the block face so that it can be trimmed to a standard size and shape with the area of interest centered in it. The second, a rectangular "trimalign" block mounted in the knife holder of the ultramicrotome, is, with the block face, aligned to the plane of sectioning, and aids in retrimming the top and bottom edges of the block face. This is the simplest trimming device yet described and the first which will, from any sort of embedded material, produce a block face with parallel top and bottom edges even if the block face is not perpendicular to the axis of the specimen holder. If the edge of the diamond knife used for sectioning is parallel to the axis of rotation of the knife holder, the block face has also been automatically aligned to the kinfe as a consequence of this aligning and trimming procedure. As a result, sectioning can begin immediately without further adjustments. PMID:694954

  19. Interior view of the trimming and packing tables, ginaca machines ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Interior view of the trimming and packing tables, ginaca machines deliver pineapples from the left to the tables, view facing east - Kahului Cannery, Plant No. 28, Cannery Building and Dryer House/Feed Storage Building, 120 Kane Street, Kahului, Maui County, HI

  20. The heading of a vehicle moving with roll and trim

    NASA Astrophysics Data System (ADS)

    Danilovich, L. N.

    1983-06-01

    A method is developed for deriving accurate formulas for calculating the heading errors of a vehicle moving with roll and trim. It is assumed that a two-degree-of-freedom gyroscope with gimbal suspension without correction is used, the main axis of the gyroscope being deflected from the horizon plane. Results obtained using the aforementioned formulas are presented.

  1. TRIM21-dependent intracellular antibody neutralization of virus infection.

    PubMed

    McEwan, William A; James, Leo C

    2015-01-01

    The ability of antibodies to prevent viral infection has long been recognized. In vitro neutralization assays, which take place in the absence of professional immune effector mechanisms, have demonstrated that the process of neutralization can occur by a variety of molecular mechanisms. Most known mechanisms involve the blocking of an event essential for infection, for instance, the steric inhibition of attachment to entry receptors. As such, neutralization is often thought of as a passive process that can occur without the need for host effector machinery. In contrast to this view, it has recently been demonstrated that neutralization can depend on the widely expressed cytosolic Fc binding protein TRIM21. This unique and novel Ig receptor directs the ubiquitin and proteasome-dependent degradation of intracellular antibody-bound viral particles and prevents infection. It has been further demonstrated that detection of cytosolic antibody by TRIM21 activates inflammatory signaling pathways and promotes the production of cytokines and chemokines. Studies in a TRIM21-null mouse demonstrate the importance of these activities: homozygous knockouts suffer fatal viral infection where wild-type mice survive. Though there is much to be learned about the role of TRIM21 in immunity, it is clear that there is a hitherto unappreciated role for antibodies in the intracellular environment.

  2. Infrared beak treatment: an alternative to conventional beak trimming

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Infrared lasers have been widely used in human medicine and its results are reliable, predictable and reproducible. Infrared lasers have recently been designed with the expressed purpose of providing a less painful, more precise beak treatment compared with conventional beak trimming. This study was...

  3. Determination of resistance and trimming moment of planing water craft

    NASA Technical Reports Server (NTRS)

    Schroder, P

    1931-01-01

    This report presents a new theory which makes it possible to interpret the resistance and the trimming moment for any loading of a planing aircraft when these values are given for one load. This application of the new theory forms the basis of the present paper. Derivations of various conversion formulas are given as well as numerous examples.

  4. Tripartite motif containing 28 (TRIM28) promotes breast cancer metastasis by stabilizing TWIST1 protein

    PubMed Central

    Wei, Chunli; Cheng, Jingliang; Zhou, Boxv; Zhu, Li; Khan, Md. Asaduzzaman; He, Tao; Zhou, Sufang; He, Jian; Lu, Xiaoling; Chen, Hanchun; Zhang, Dianzheng; Zhao, Yongxiang; Fu, Junjiang

    2016-01-01

    TRIM28 regulates its target genes at both transcriptional and posttranscriptional levels. Here we report that a TRIM28-TWIST1-EMT axis exists in breast cancer cells and TRIM28 promotes breast cancer metastasis by stabilizing TWIST1 and subsequently enhancing EMT. We find that TRIM28 is highly expressed in both cancer cell lines and advanced breast cancer tissues, and the levels of TRIM28 and TWIST1 are positively correlated with the aggressiveness of breast carcinomas. Overexpression and depletion of TRIM28 up- and down-regulates the protein, but not the mRNA levels of TWIST1, respectively, suggesting that TRIM28 upregulates TWIST1 post-transcriptionally. Overexpression of TRIM28 in breast cancer cell line promotes cell migration and invasion. Knockdown of TRIM28 reduces the protein level of TWIST1 with concurrent upregulation of E-cadherin and downregulation of N-cadherin and consequently inhibits cell migration and invasion. Furthermore, Immunoprecipitation and GST pull-down assays demonstrated that TRIM28 interacts with TWIST1 directly and this interaction is presumed to protect TWIST1 from degradation. Our study revealed a novel mechanism in breast cancer cells that TRIM28 enhances metastasis by stabilizing TWIST1, suggesting that targeting TRIM28 could be an efficacious strategy in breast cancer treatment. PMID:27412325

  5. Controlled lateral anisotropy in correlated manganite heterostructures by interface-engineered oxygen octahedral coupling

    NASA Astrophysics Data System (ADS)

    Liao, Z.; Huijben, M.; Zhong, Z.; Gauquelin, N.; Macke, S.; Green, R. J.; van Aert, S.; Verbeeck, J.; van Tendeloo, G.; Held, K.; Sawatzky, G. A.; Koster, G.; Rijnders, G.

    2016-04-01

    Controlled in-plane rotation of the magnetic easy axis in manganite heterostructures by tailoring the interface oxygen network could allow the development of correlated oxide-based magnetic tunnelling junctions with non-collinear magnetization, with possible practical applications as miniaturized high-switching-speed magnetic random access memory (MRAM) devices. Here, we demonstrate how to manipulate magnetic and electronic anisotropic properties in manganite heterostructures by engineering the oxygen network on the unit-cell level. The strong oxygen octahedral coupling is found to transfer the octahedral rotation, present in the NdGaO3 (NGO) substrate, to the La2/3Sr1/3MnO3 (LSMO) film in the interface region. This causes an unexpected realignment of the magnetic easy axis along the short axis of the LSMO unit cell as well as the presence of a giant anisotropic transport in these ultrathin LSMO films. As a result we possess control of the lateral magnetic and electronic anisotropies by atomic-scale design of the oxygen octahedral rotation.

  6. Controlled lateral anisotropy in correlated manganite heterostructures by interface-engineered oxygen octahedral coupling.

    PubMed

    Liao, Z; Huijben, M; Zhong, Z; Gauquelin, N; Macke, S; Green, R J; Van Aert, S; Verbeeck, J; Van Tendeloo, G; Held, K; Sawatzky, G A; Koster, G; Rijnders, G

    2016-04-01

    Controlled in-plane rotation of the magnetic easy axis in manganite heterostructures by tailoring the interface oxygen network could allow the development of correlated oxide-based magnetic tunnelling junctions with non-collinear magnetization, with possible practical applications as miniaturized high-switching-speed magnetic random access memory (MRAM) devices. Here, we demonstrate how to manipulate magnetic and electronic anisotropic properties in manganite heterostructures by engineering the oxygen network on the unit-cell level. The strong oxygen octahedral coupling is found to transfer the octahedral rotation, present in the NdGaO3 (NGO) substrate, to the La2/3Sr1/3MnO3 (LSMO) film in the interface region. This causes an unexpected realignment of the magnetic easy axis along the short axis of the LSMO unit cell as well as the presence of a giant anisotropic transport in these ultrathin LSMO films. As a result we possess control of the lateral magnetic and electronic anisotropies by atomic-scale design of the oxygen octahedral rotation. PMID:26950593

  7. Control of nitratation in an oxygen-limited autotrophic nitrification/denitrification rotating biological contactor through disc immersion level variation.

    PubMed

    Courtens, Emilie N P; Boon, Nico; De Clippeleir, Haydée; Berckmoes, Karla; Mosquera, Mariela; Seuntjens, Dries; Vlaeminck, Siegfried E

    2014-03-01

    With oxygen supply playing a crucial role in an oxygen-limited autotrophic nitrification/denitrification (OLAND) rotating biological contactor (RBC), its controlling factors were investigated in this study. Disc rotation speeds (1.8 and 3.6rpm) showed no influence on the process performance of a lab-scale RBC, although abiotic experiments showed a significant effect on the oxygenation capacity. Estimations of the biological oxygen uptake rate revealed that 85-89% of the oxygen was absorbed by the microorganisms during the air exposure of the discs. Indeed, increasing the disc immersion (50 to 75-80%) could significantly suppress undesired nitratation, on the short and long term. The presented results demonstrated that nitratation could be controlled by the immersion level and revealed that oxygen control in an OLAND RBC should be predominantly based on the atmospheric exposure percentage of the discs.

  8. Controls on aquatic carbon cycling in a carbonate dominated groundwater catchment using dissolved oxygen dynamics

    NASA Astrophysics Data System (ADS)

    Butler, A. P.; Parker, S. J.

    2015-12-01

    Carbon cycling in aquatic systems is increasingly seen as playing an important role in global carbon budgets and hence on potential impacts and controls on global warming. However, determining the partitioning within and transfer between different carbon stores is a major challenge, particularly where there are multiple sources and controls on carbon utilisation. Dissolved oxygen, DO, provides a proxy for investigating the dynamics of carbon utilisation in aquatic systems. High temporal resolution monitoring of DO at multiple site on the Hampshire Avon, a chalk dominated permeable catchment in southern England, UK, has been investigated using a dynamic DO model in order to investigate the biochemical cycling of carbon. Gross primary production, governed by photosynthetically active radiation, is determined through inverse modelling. Model simplification though parameter reduction is achieved through investigating controls on aeration (the transfer of oxygen across the atmosphere-river interface) and respiration. Seasonal changes in biomass affect long term oxygen dynamics, which are compounded by episodic hydrological events that control the partitioning of surface water and groundwater in the stream channel and consequently the sources of carbon and DO in the river channel. Using variations in surface geology across the catchment the impacts of varying baseflow characteristics on carbon cycling within the catchment is demonstrated.

  9. Trim and Structural Optimization of Subsonic Transport Wings Using Nonconventional Aeroelastic Tailoring

    NASA Technical Reports Server (NTRS)

    Stanford, Bret K.; Jutte, Christine V.

    2014-01-01

    Several minimum-mass aeroelastic optimization problems are solved to evaluate the effectiveness of a variety of novel tailoring schemes for subsonic transport wings. Aeroelastic strength and panel buckling constraints are imposed across a variety of trimmed maneuver loads. Tailoring with metallic thickness variations, functionally graded materials, composite laminates, tow steering, and distributed trailing edge control effectors are all found to provide reductions in structural wing mass with varying degrees of success. The question as to whether this wing mass reduction will offset the increased manufacturing cost is left unresolved for each case.

  10. T-cell-intrinsic Tif1α/Trim24 regulates IL-1R expression on TH2 cells and TH2 cell-mediated airway allergy.

    PubMed

    Perez-Lloret, Jimena; Okoye, Isobel S; Guidi, Riccardo; Kannan, Yashaswini; Coomes, Stephanie M; Czieso, Stephanie; Mengus, Gabrielle; Davidson, Irwin; Wilson, Mark S

    2016-02-01

    There is a paucity of new therapeutic targets to control allergic reactions and forestall the rising trend of allergic diseases. Although a variety of immune cells contribute to allergy, cytokine-secreting αβ(+)CD4(+) T-helper 2 (TH2) cells orchestrate the type-2-driven immune response in a large proportion of atopic asthmatics. To identify previously unidentified putative targets in pathogenic TH2 cells, we performed in silico analyses of recently published transcriptional data from a wide variety of pathogenic TH cells [Okoye IS, et al. (2014) Proc Natl Acad Sci USA 111(30):E3081-E3090] and identified that transcription intermediary factor 1 regulator-alpha (Tif1α)/tripartite motif-containing 24 (Trim24) was predicted to be active in house dust mite (HDM)- and helminth-elicited Il4(gfp+)αβ(+)CD4(+) TH2 cells but not in TH1, TH17, or Treg cells. Testing this prediction, we restricted Trim24 deficiency to T cells by using a mixed bone marrow chimera system and found that T-cell-intrinsic Trim24 is essential for HDM-mediated airway allergy and antihelminth immunity. Mechanistically, HDM-elicited Trim24(-/-) T cells have reduced expression of many TH2 cytokines and chemokines and were predicted to have compromised IL-1-regulated signaling. Following this prediction, we found that Trim24(-/-) T cells have reduced IL-1 receptor (IL-1R) expression, are refractory to IL-1β-mediated activation in vitro and in vivo, and fail to respond to IL-1β-exacerbated airway allergy. Collectively, these data identify a previously unappreciated Trim24-dependent requirement for IL-1R expression on TH2 cells and an important nonredundant role for T-cell-intrinsic Trim24 in TH2-mediated allergy and antihelminth immunity. PMID:26787865

  11. T-cell–intrinsic Tif1α/Trim24 regulates IL-1R expression on TH2 cells and TH2 cell-mediated airway allergy

    PubMed Central

    Perez-Lloret, Jimena; Okoye, Isobel S.; Guidi, Riccardo; Kannan, Yashaswini; Coomes, Stephanie M.; Czieso, Stephanie; Mengus, Gabrielle; Davidson, Irwin; Wilson, Mark S.

    2016-01-01

    There is a paucity of new therapeutic targets to control allergic reactions and forestall the rising trend of allergic diseases. Although a variety of immune cells contribute to allergy, cytokine-secreting αβ+CD4+ T-helper 2 (TH2) cells orchestrate the type-2–driven immune response in a large proportion of atopic asthmatics. To identify previously unidentified putative targets in pathogenic TH2 cells, we performed in silico analyses of recently published transcriptional data from a wide variety of pathogenic TH cells [Okoye IS, et al. (2014) Proc Natl Acad Sci USA 111(30):E3081–E3090] and identified that transcription intermediary factor 1 regulator-alpha (Tif1α)/tripartite motif-containing 24 (Trim24) was predicted to be active in house dust mite (HDM)- and helminth-elicited Il4gfp+αβ+CD4+ TH2 cells but not in TH1, TH17, or Treg cells. Testing this prediction, we restricted Trim24 deficiency to T cells by using a mixed bone marrow chimera system and found that T-cell–intrinsic Trim24 is essential for HDM-mediated airway allergy and antihelminth immunity. Mechanistically, HDM-elicited Trim24−/− T cells have reduced expression of many TH2 cytokines and chemokines and were predicted to have compromised IL-1–regulated signaling. Following this prediction, we found that Trim24−/− T cells have reduced IL-1 receptor (IL-1R) expression, are refractory to IL-1β–mediated activation in vitro and in vivo, and fail to respond to IL-1β–exacerbated airway allergy. Collectively, these data identify a previously unappreciated Trim24-dependent requirement for IL-1R expression on TH2 cells and an important nonredundant role for T-cell–intrinsic Trim24 in TH2-mediated allergy and antihelminth immunity. PMID:26787865

  12. Fish TRIM39 regulates cell cycle progression and exerts its antiviral function against iridovirus and nodavirus.

    PubMed

    Wang, Wei; Huang, Youhua; Yu, Yepin; Yang, Ying; Xu, Meng; Chen, Xiuli; Ni, Songwei; Qin, Qiwei; Huang, Xiaohong

    2016-03-01

    The tripartite motif (TRIM)-containing proteins exert important immune regulatory roles through regulating different signaling pathways in response to different stimuli. TRIM39, a member of the TRIM family, is a RING domain-containing E3 ubiquitin ligase which could regulate cell cycle progression and apoptosis. However, the antiviral activity of TRIM39 is not explored. Here, a TRIM39 homolog from grouper, Epinephelus coioides (EcTRIM39) was cloned, and its effects on cell cycle progression and fish virus replication were investigated. The full-length EcTRIM39 cDNA was composed of 2535 bp and encoded a polypeptide of 543 amino acids with 70% identity with TRIM39 homologs from bicolor damselfish. Amino acid alignment analysis indicated that EcTRIM39 contained a RING finger, B-box and SPRY domain. Expression profile analysis revealed that EcTRIM39 was abundant in intestine, spleen and skin. Upon different stimuli in vivo, the EcTRIM39 transcript was obviously up-regulated after challenging with Singapore grouper iridovirus (SGIV), and polyinosinic-polycytidylic acid (poly I:C). Using fluorescence microscopy, we found that EcTRIM39 localized in the cytoplasm and formed aggregates in grouper spleen (GS) cells. The ectopic expression of EcTRIM39 in vitro affected the cell cycle progression via mediating G1/S transition. Moreover, the RING domain was essential for its accurate localization and effect on cell cycle. In addition, overexpression of EcTRIM39 significantly inhibited viral gene transcription of SGIV and red-spotted grouper nervous necrosis virus (RGNNV) in vitro, and the mutant of RING exerted the opposite effect. Together, our results demonstrated that fish TRIM39 not only regulated the cell cycle progression, but also acted as an important regulator of fish innate immune response against viruses. PMID:26784918

  13. Fish TRIM39 regulates cell cycle progression and exerts its antiviral function against iridovirus and nodavirus.

    PubMed

    Wang, Wei; Huang, Youhua; Yu, Yepin; Yang, Ying; Xu, Meng; Chen, Xiuli; Ni, Songwei; Qin, Qiwei; Huang, Xiaohong

    2016-03-01

    The tripartite motif (TRIM)-containing proteins exert important immune regulatory roles through regulating different signaling pathways in response to different stimuli. TRIM39, a member of the TRIM family, is a RING domain-containing E3 ubiquitin ligase which could regulate cell cycle progression and apoptosis. However, the antiviral activity of TRIM39 is not explored. Here, a TRIM39 homolog from grouper, Epinephelus coioides (EcTRIM39) was cloned, and its effects on cell cycle progression and fish virus replication were investigated. The full-length EcTRIM39 cDNA was composed of 2535 bp and encoded a polypeptide of 543 amino acids with 70% identity with TRIM39 homologs from bicolor damselfish. Amino acid alignment analysis indicated that EcTRIM39 contained a RING finger, B-box and SPRY domain. Expression profile analysis revealed that EcTRIM39 was abundant in intestine, spleen and skin. Upon different stimuli in vivo, the EcTRIM39 transcript was obviously up-regulated after challenging with Singapore grouper iridovirus (SGIV), and polyinosinic-polycytidylic acid (poly I:C). Using fluorescence microscopy, we found that EcTRIM39 localized in the cytoplasm and formed aggregates in grouper spleen (GS) cells. The ectopic expression of EcTRIM39 in vitro affected the cell cycle progression via mediating G1/S transition. Moreover, the RING domain was essential for its accurate localization and effect on cell cycle. In addition, overexpression of EcTRIM39 significantly inhibited viral gene transcription of SGIV and red-spotted grouper nervous necrosis virus (RGNNV) in vitro, and the mutant of RING exerted the opposite effect. Together, our results demonstrated that fish TRIM39 not only regulated the cell cycle progression, but also acted as an important regulator of fish innate immune response against viruses.

  14. The use of oxygen scavengers to prevent the transient discolouration of ground beef packaged under controlled, oxygen-depleted atmospheres.

    PubMed

    Gill, C O; McGinnis, J C

    1995-01-01

    Rates of O(2) absorption from air were determined for a type of commercial O(2) scavenger that is formulated for rapid O(2) absorption at chiller temperatures. Rates of O(2) absorption from N(2) atmospheres containing 600 ppm O(2) were determined for trays that each contained 350 g of ground beef. Packs with controlled atmospheres of N(2) that contained ground beef and O(2) scavengers were prepared, to determine the conditions under which the scavengers could prevent the transient discolouration of the meat which arises from its reaction with the residual O(2) initially present in pack atmospheres. The rates of O(2) absorption by individual scavengers varied from the average by ±50%. The rate of O(2) absorption declined with decreasing oxygen concentration, from an average value per scavenger of about 12 ml h(-1) when O(2) concentrations were between 20 and 10%. At O(2) concentrations <1% (10,000 ppm) the rate of O(2) absorption was directly proportioned to the O(2) concentration so that the O(2) concentration in an atmosphere in a gas-impermeable pouch declined exponentially with time. The absorption of O(2) by ground beef was similarly dependent on the O(2) concentration. At 2 °C, the transient discolouration of beef in atmospheres initially containing about 50 ppm O(2) was prevented by the presence of 17.5 scavengers per l of atmosphere. At -15 °C, discolouration was prevented by 5 scavengers per l. The findings indicate that the O(2) concentration in pack atmospheres has to be reduced below 10 ppm within 30 min at 2 °C, or 2 h at -1.5 °C if ground beef is not to transiently discolour. It is unlikely that the required rates of O(2) absorption could be obtained economically with currently available, commercial O(2) scavengers.

  15. Data acquisition and control system with a programmable logic controller (PLC) for a pulsed chemical oxygen-iodine laser

    NASA Astrophysics Data System (ADS)

    Yu, Haijun; Li, Guofu; Duo, Liping; Jin, Yuqi; Wang, Jian; Sang, Fengting; Kang, Yuanfu; Li, Liucheng; Wang, Yuanhu; Tang, Shukai; Yu, Hongliang

    2015-02-01

    A user-friendly data acquisition and control system (DACS) for a pulsed chemical oxygen -iodine laser (PCOIL) has been developed. It is implemented by an industrial control computer,a PLC, and a distributed input/output (I/O) module, as well as the valve and transmitter. The system is capable of handling 200 analogue/digital channels for performing various operations such as on-line acquisition, display, safety measures and control of various valves. These operations are controlled either by control switches configured on a PC while not running or by a pre-determined sequence or timings during the run. The system is capable of real-time acquisition and on-line estimation of important diagnostic parameters for optimization of a PCOIL. The DACS system has been programmed using software programmable logic controller (PLC). Using this DACS, more than 200 runs were given performed successfully.

  16. Application of multiple antimicrobial interventions for microbial decontamination of commercial beef trim.

    PubMed

    Kang, D H; Koohmaraie, M; Siragusa, G R

    2001-02-01

    Commercially produced, irregularly sized (range, 100 to 400 cm2), uninoculated beef trim was treated by a previously optimized multihurdle antimicrobial process under spray system or hot air gun with set-up speed (1 cm/s): W (water wash at 65 psi for five passes) + HW (82 degrees C water at 30 psi for three passes) + HA (510 degrees C air for five passes) + L (2% [vol/vol] room temperature lactic acid wash at 30 psi for three passes). After treatment, the trim was finely ground, vacuum packaged, and stored at 4 degrees C for up to 20 days. At regular intervals (0, 5, 10, 15, and 20 days of storage at 4 degrees C), the ground beef was analyzed to measure mesophilic aerobic bacteria (APC), coliforms, psychrotrophic bacteria (PCT), and presumptive lactic acid bacteria (PLAB) and compared with the untreated control. The numbers of APC, coliforms, PCT, and PLAB were reduced to nearly nondetectable levels immediately after treatment, with significant differences compared with the control (P < 0.05), then started to increase after 5 to 10 days of storage at 4 degrees C. After 20 days, microbial populations of treated ground beef were significantly lower than those of nontreated ground beef for the numbers of APC, coliforms, PCT, and PLAB (P < 0.05), with differences of 1.2, 2.4, 1.6, and 1.6 log CFU/g, respectively. Based on microbial reduction and quality aspects, the multihurdle antimicrobial process was identified as an effective intervention to reduce coliforms on beef trim. PMID:11271762

  17. Fundamental Role of Oxygen Stoichiometry in Controlling the Band Gap and Reactivity of Cupric Oxide Nanosheets.

    PubMed

    Fishman, Zachary S; Rudshteyn, Benjamin; He, Yulian; Liu, Bolun; Chaudhuri, Subhajyoti; Askerka, Mikhail; Haller, Gary L; Batista, Victor S; Pfefferle, Lisa D

    2016-08-31

    CuO is a nonhazardous, earth-abundant material that has exciting potential for use in solar cells, photocatalysis, and other optoelectronic applications. While progress has been made on the characterization of properties and reactivity of CuO, there remains significant controversy on how to control the precise band gap by tuning conditions of synthetic methods. Here, we combine experimental and theoretical methods to address the origin of the wide distribution of reported band gaps for CuO nanosheets. We establish reaction conditions to control the band gap and reactivity via a high-temperature treatment in an oxygen-rich environment. SEM, TEM, XRD, and BET physisorption reveals little to no change in nanostructure, crystal structure, or surface area. In contrast, UV-vis spectroscopy shows a modulation in the material band gap over a range of 330 meV. A similar trend is found in H2 temperature-programmed reduction where peak H2 consumption temperature decreases with treatment. Calculations of the density of states show that increasing the oxygen to copper coverage ratio of the surface accounts for most of the observed changes in the band gap. An oxygen exchange mechanism, supported by (18)O2 temperature-programmed oxidation, is proposed to be responsible for changes in the CuO nanosheet oxygen to copper stoichiometry. The changes induced by oxygen depletion/deposition serve to explain discrepancies in the band gap of CuO, as reported in the literature, as well as dramatic differences in catalytic performance.

  18. Oxygen stoichiometry control of nanometric oxide compounds: The case of titanium ferrites

    SciTech Connect

    Millot, N.

    2011-10-15

    Three techniques have been coupled with an original device, based on H{sub 2}/H{sub 2}O equilibrium, controlling oxygen partial pressure: XRD, TGA and DC conductivity in order to characterize very reactive compounds such as nanometric powders. From XRD, both the structure and the oxygen stoichiometry (thanks to their lattice parameter) were investigated in situ. From TGA, it was the oxygen stoichiometry (thanks to mass gain or loss) which was determined. From DC conductivity, it was both the structure and the oxygen stoichiometry (thanks to the activation energy) which were obtained. The advantages were to determine very rapidly and with a small amount of powder the equilibrium conditions (T, pO{sub 2}) necessary to obtain the desired phase and stoichiometry. These methods have been evaluated for nanometric titanium ferrites. Two phenomena have been observed during the reducing process: the precipitation of a rhombohedral phase and a significant grain growth linked together. - Graphical abstract: XRD patterns of Fe{sub 3(1-{delta})}O{sub 4} nanometric powders obtained in situ during a reducing treatment. The stoichiometric compound was obtained by a thermal annealing at 460 deg. C under pO{sub 2}=3x10{sup -26} Pa ({Phi}{sub DRX}=100 nm). In inset, data of the experimental lattice parameter compared to the theoretical one. {alpha} represents the rhomboedrical phase which precipitates during this thermal treatment, then disappeared. Highlights: > The control of the deviation from oxygen stoichiometry is rarely consider in literature. > At the nanometric scale, it is necessary to develop synthesis routes under appropriate atmosphere. > These synthesis must be coupled with in situ characterization tools. > It opens the door to fast and precise studies concerning the evolution of nanometric materials.

  19. Oxygen and an Extracellular Phase Transition Independently Control Central Regulatory Genes and Conidiogenesis in Aspergillus fumigatus

    PubMed Central

    Chi, Myoung-Hwan; Craven, Kelly D.

    2013-01-01

    Conidiogenesis is the primary process for asexual reproduction in filamentous fungi. As the conidia resulting from the conidiogenesis process are primarily disseminated via air currents and/or water, an outstanding question has been how fungi recognize aerial environments suitable for conidial development. In this study, we documented the somewhat complex development of the conidia-bearing structures, termed conidiophores, from several Aspergillus species in a subsurface (gel-phase) layer of solid media. A subset of the isolates studied was able to develop conidiophores in a gel-phase environment, but exposure to the aeriform environment was required for the terminal developmental transition from phialide cells to conidia. The remaining Aspergilli could not initiate the conidiogenesis process until they were exposed to the aeriform environment. Our observations of conidiophore development in high or low oxygen conditions in both aeriform and gel-phase environments revealed that oxygen and the aeriform state are positive environmental factors for inducing conidiogenesis in most of the aspergilli tested in this study. Transcriptional analysis using A. fumigatus strain AF293 confined to either the aeriform or gel-phase environments revealed that expression of a key regulatory gene for conidiophore development (AfubrlA) is facilitated by oxygen while expression of another regulatory gene controlling conidia formation from phialides (AfuabaA) was repressed regardless of oxygen levels in the gel-embedded environment. Furthermore, by comparing the developmental behavior of conidiation-defective mutants lacking genes controlling various regulatory checkpoints throughout the conidiogenesis pathway, we propose that this aerial response by the fungus requires both oxygen and the phase transition (solid to aeriform), with these environmental signals integrating into the upstream regulatory pathway and central regulatory pathway of conidiogenesis, respectively. Our findings

  20. Coordinated control of carbon and oxygen for ultra-low-carbon interstitial-free steel in a smelting process

    NASA Astrophysics Data System (ADS)

    Wang, Min; Bao, Yan-ping; Yang, Quan; Zhao, Li-hua; Lin, Lu

    2015-12-01

    Low residual-free-oxygen before final de-oxidation was beneficial to improving the cleanness of ultra-low-carbon steel. For ultra-low-carbon steel production, the coordinated control of carbon and oxygen is a precondition for achieving low residual oxygen during the Ruhrstahl Heraeus (RH) decarburization process. In this work, we studied the coordinated control of carbon and oxygen for ultra-low-carbon steel during the basic oxygen furnace (BOF) endpoint and RH process using data statistics, multiple linear regressions, and thermodynamics computations. The results showed that the aluminum yield decreased linearly with increasing residual oxygen in liquid steel. When the mass ratio of free oxygen and carbon ([O]/[C]) in liquid steel before RH decarburization was maintained between 1.5 and 2.0 and the carbon range was from 0.030wt% to 0.040wt%, the residual oxygen after RH natural decarburization was low and easily controlled. To satisfy the requirement for RH decarburization, the carbon and free oxygen at the BOF endpoint should be controlled to be between 297 × 10-6 and 400 × 10-6 and between 574 × 10-6 and 775 × 10-6, respectively, with a temperature of 1695 to 1715°C and a furnace campaign of 1000 to 5000 heats.

  1. Oxygen control of ethylene biosynthesis during seed development in Arabidopsis thaliana (L.) Heynh

    NASA Technical Reports Server (NTRS)

    Ramonell, K. M.; McClure, G.; Musgrave, M. E.

    2002-01-01

    An unforeseen side-effect on plant growth in reduced oxygen is the loss of seed production at concentrations around 25% atmospheric (50 mmol mol-1 O2). In this study, the model plant Arabidopsis thaliana (L.) Heynh. cv. 'Columbia' was used to investigate the effect of low oxygen on ethylene biosynthesis during seed development. Plants were grown in a range of oxygen concentrations (210 [equal to ambient], 160, 100, 50 and 25 mmol mol-1) with 0.35 mmol mol-1 CO2 in N2. Ethylene in full-sized siliques was sampled using gas chromatography, and viable seed production was determined at maturity. Molecular analysis of ethylene biosynthesis was accomplished using cDNAs encoding 1-aminocyclopropane-1-carboxylic acid (ACC) synthase and ACC oxidase in ribonuclease protection assays and in situ hybridizations. No ethylene was detected in siliques from plants grown at 50 and 25 mmol mol-1 O2. At the same time, silique ACC oxidase mRNA increased three-fold comparing plants grown under the lowest oxygen with ambient controls, whereas ACC synthase mRNA was unaffected. As O2 decreased, tissue-specific patterning of ACC oxidase and ACC synthase gene expression shifted from the embryo to the silique wall. These data demonstrate how low O2 modulates the activity and expression of the ethylene biosynthetic pathway during seed development in Arabidopsis.

  2. TRIM5{alpha} association with cytoplasmic bodies is not required for antiretroviral activity

    SciTech Connect

    Song, Byeongwoon; Diaz-Griffero, Felipe; Park, Do Hyun; Rogers, Thomas; Stremlau, Matthew; Sodroski, Joseph . E-mail: joseph_sodroski@dfci.harvard.edu

    2005-12-20

    The tripartite motif (TRIM) protein, TRIM5{alpha}, restricts infection by particular retroviruses. Many TRIM proteins form cytoplasmic bodies of unknown function. We investigated the relationship between cytoplasmic body formation and the structure and antiretroviral activity of TRIM5{alpha}. In addition to diffuse cytoplasmic staining, the TRIM5{alpha} proteins from several primate species were located in cytoplasmic bodies of different sizes; by contrast, TRIM5{alpha} from spider monkeys did not form cytoplasmic bodies. Despite these differences, all of the TRIM5{alpha} proteins exhibited the ability to restrict infection by particular retroviruses. Treatment of cells with geldanamycin, an Hsp90 inhibitor, resulted in disappearance or reduction of the TRIM5{alpha}-associated cytoplasmic bodies, yet exerted little effect on the restriction of retroviral infection. Studies of green fluorescent protein-TRIM5{alpha} fusion proteins indicated that no TRIM5{alpha} domain is specifically required for association with cytoplasmic bodies. Apparently, the formation of cytoplasmic bodies is not required for the antiretroviral activity of TRIM5{alpha}.

  3. Fermentation process using specific oxygen uptake rates as a process control

    SciTech Connect

    Van Hoek, Pim; Aristidou, Aristos; Rush, Brian

    2014-09-09

    Specific oxygen uptake (OUR) is used as a process control parameter in fermentation processes. OUR is determined during at least the production phase of a fermentation process, and process parameters are adjusted to maintain the OUR within desired ranges. The invention is particularly applicable when the fermentation is conducted using a microorganism having a natural PDC pathway that has been disrupted so that it no longer functions. Microorganisms of this sort often produce poorly under strictly anaerobic conditions. Microaeration controlled by monitoring OUR allows the performance of the microorganism to be optimized.

  4. Fermentation process using specific oxygen uptake rates as a process control

    DOEpatents

    Van Hoek, Pim; Aristidou, Aristos; Rush, Brian

    2011-05-10

    Specific oxygen uptake (OUR) is used as a process control parameter in fermentation processes. OUR is determined during at least the production phase of a fermentation process, and process parameters are adjusted to maintain the OUR within desired ranges. The invention is particularly applicable when the fermentation is conducted using a microorganism having a natural PDC pathway that has been disrupted so that it no longer functions. Microorganisms of this sort often produce poorly under strictly anaerobic conditions. Microaeration controlled by monitoring OUR allows the performance of the microorganism to be optimized.

  5. Fermentation process using specific oxygen uptake rates as a process control

    DOEpatents

    Van Hoek, Pim; Aristidou, Aristos; Rush, Brian J.

    2016-08-30

    Specific oxygen uptake (OUR) is used as a process control parameter in fermentation processes. OUR is determined during at least the production phase of a fermentation process, and process parameters are adjusted to maintain the OUR within desired ranges. The invention is particularly applicable when the fermentation is conducted using a microorganism having a natural PDC pathway that has been disrupted so that it no longer functions. Microorganisms of this sort often produce poorly under strictly anaerobic conditions. Microaeration controlled by monitoring OUR allows the performance of the microorganism to be optimized.

  6. Fermentation process using specific oxygen uptake rates as a process control

    DOEpatents

    Van Hoek; Pim , Aristidou; Aristos , Rush; Brian

    2007-06-19

    Specific oxygen uptake (OUR) is used as a process control parameter in fermentation processes. OUR is determined during at least the production phase of a fermentation process, and process parameters are adjusted to maintain the OUR within desired ranges. The invention is particularly applicable when the fermentation is conducted using a microorganism having a natural PDC pathway that has been disrupted so that it no longer functions. Microorganisms of this sort often produce poorly under strictly anaerobic conditions. Microaeration controlled by monitoring OUR allows the performance of the microorganism to be optimized.

  7. Photochromic metal-organic frameworks: reversible control of singlet oxygen generation.

    PubMed

    Park, Jihye; Feng, Dawei; Yuan, Shuai; Zhou, Hong-Cai

    2015-01-01

    The controlled generation of singlet oxygen is of great interest owing to its potential applications including industrial wastewater treatment, photochemistry, and photodynamic therapy. Two photochromic metal-organic frameworks, PC-PCN and SO-PCN, have been developed. A photochromic reaction has been successfully realized in PC-PCN while maintaining its single crystallinity. In particular, as a solid-state material which inherently integrates the photochromic switch and photosensitizer, SO-PCN has demonstrated reversible control of (1)O2 generation. Additionally, SO-PCN shows catalytic activity towards photooxidation of 1,5-dihydroxynaphthalene.

  8. The 6670-Newton attitude-control thruster using hydrogen-oxygen propellant

    NASA Technical Reports Server (NTRS)

    Gordon, L. H.

    1977-01-01

    The development of a reusable, attitude-control propulsion system for the space transportation system is discussed. A flight weight, gaseous oxygen attitude control thruster assembly was tested to obtain data on cyclic life, thermal and hydraulic characteristics, pulse response, and performance. The basic thruster components were tested in excess of 51,000 pulses and 660 seconds, steady state, with no degradation of the 93 percent characteristic exhaust velocity efficiency level. Nominal operating conditions were a chamber pressure of 207 N sq cm (300 psia), a mixture ratio of 4.0, a pulse width of 100 ms, and a pulse frequency of 2 Hz.

  9. Duck TRIM27-L enhances MAVS signaling and is absent in chickens and turkeys.

    PubMed

    Blaine, Alysson H; Miranzo-Navarro, Domingo; Campbell, Lee K; Aldridge, Jerry R; Webster, Robert G; Magor, Katharine E

    2015-10-01

    Wild waterfowl, including mallard ducks, are the natural reservoir of avian influenza A virus and they are resistant to strains that would cause fatal infection in chickens. Here we investigate potential involvement of TRIM proteins in the differential response of ducks and chickens to influenza. We examine a cluster of TRIM genes located on a single scaffold in the duck genome, which is a conserved synteny group with a TRIM cluster located in the extended MHC region in chickens and turkeys. We note a TRIM27-like gene is present in ducks, and absent in chickens and turkeys. Orthologous genes are predicted in many birds and reptiles, suggesting the gene has been lost in chickens and turkeys. Using quantitative real-time PCR (qPCR) we show that TRIM27-L, and the related TRIM27.1, are upregulated 5- and 9-fold at 1 day post-infection with highly pathogenic A/Vietnam/1203/2004. To assess whether TRIM27.1 or TRIM27-L are involved in modulation of antiviral gene expression, we overexpressed them in DF1 chicken cells, and neither show any direct effect on innate immune gene expression. However, when co-transfected with duck RIG-I-N (d2CARD) to constitutively activate the MAVS pathway, TRIM27.1 weakly decreases, while TRIM27-L strongly activates innate immune signaling leading to increased transcription of antiviral genes MX1 and IFN-β. Furthermore, when both are co-expressed, the activation of the MAVS signaling pathway by TRIM27-L over-rides the inhibition by TRIM27.1. Thus, ducks have an activating TRIM27-L to augment MAVS signaling following RIG-I detection, while chickens lack both TRIM27-L and RIG-I itself.

  10. Duck TRIM27-L enhances MAVS signalling and is absent in chickens and turkeys

    PubMed Central

    Blaine, Alysson H.; Miranzo-Navarro, Domingo; Campbell, Lee K.; Aldridge, Jerry R.; Webster, Robert G.; Magor, Katharine E.

    2015-01-01

    Wild waterfowl, including mallard ducks, are the natural reservoir of avian influenza A virus and they are resistant to strains that would cause fatal infection in chickens. Here we investigate potential involvement of TRIM proteins in the differential response of ducks and chickens to influenza. We examine a cluster of TRIM genes located on a single scaffold in the duck genome, which is a conserved synteny group with a TRIM cluster located in the extended MHC region in chickens and turkeys. We note a TRIM27-like gene is present in ducks, and absent in chickens and turkeys. Orthologous genes are predicted in many birds and reptiles, suggesting the gene has been lost in chickens and turkeys. Using quantitative real-time PCR (qPCR) we show that TRIM27-L, and the related TRIM27.1, are upregulated 5- and 9-fold at 1 day post-infection with highly pathogenic A/Vietnam/1203/2004. To assess whether TRIM27.1 or TRIM27-L are involved in modulation of antiviral gene expression, we overexpressed them in DF1 chicken cells, and neither show any direct effect on innate immune gene expression. However, when co-transfected with duck RIG-I-N (d2CARD) to constitutively activate the MAVS pathway, TRIM27.1 weakly decreases, while TRIM27-L strongly activates innate immune signalling leading to increased transcription of antiviral genes MX1 and IFN-β. Furthermore, when both are co-expressed, the activation of the MAVS signalling pathway by TRIM27-L over-rides the inhibition by TRIM27.1. Thus ducks have an activating TRIM27-L to augment MAVS signalling following RIG-I detection, while chickens lack both TRIM27-L and RIG-I itself. PMID:26254985

  11. Trim37-deficient mice recapitulate several features of the multi-organ disorder Mulibrey nanism.

    PubMed

    Kettunen, Kaisa M; Karikoski, Riitta; Hämäläinen, Riikka H; Toivonen, Teija T; Antonenkov, Vasily D; Kulesskaya, Natalia; Voikar, Vootele; Hölttä-Vuori, Maarit; Ikonen, Elina; Sainio, Kirsi; Jalanko, Anu; Karlberg, Susann; Karlberg, Niklas; Lipsanen-Nyman, Marita; Toppari, Jorma; Jauhiainen, Matti; Hiltunen, J Kalervo; Jalanko, Hannu; Lehesjoki, Anna-Elina

    2016-01-01

    Mulibrey nanism (MUL) is a rare autosomal recessive multi-organ disorder characterized by severe prenatal-onset growth failure, infertility, cardiopathy, risk for tumors, fatty liver, and type 2 diabetes. MUL is caused by loss-of-function mutations in TRIM37, which encodes an E3 ubiquitin ligase belonging to the tripartite motif (TRIM) protein family and having both peroxisomal and nuclear localization. We describe a congenic Trim37 knock-out mouse (Trim37(-/-)) model for MUL. Trim37(-/-) mice were viable and had normal weight development until approximately 12 months of age, after which they started to manifest increasing problems in wellbeing and weight loss. Assessment of skeletal parameters with computer tomography revealed significantly smaller skull size, but no difference in the lengths of long bones in Trim37(-/-) mice as compared with wild-type. Both male and female Trim37(-/-) mice were infertile, the gonads showing germ cell aplasia, hilus and Leydig cell hyperplasia and accumulation of lipids in and around Leydig cells. Male Trim37(-/-) mice had elevated levels of follicle-stimulating and luteinizing hormones, but maintained normal levels of testosterone. Six-month-old Trim37(-/-) mice had elevated fasting blood glucose and low fasting serum insulin levels. At 1.5 years Trim37(-/-) mice showed non-compaction cardiomyopathy, hepatomegaly, fatty liver and various tumors. The amount and morphology of liver peroxisomes seemed normal in Trim37(-/-) mice. The most consistently seen phenotypes in Trim37(-/-) mice were infertility and the associated hormonal findings, whereas there was more variability in the other phenotypes observed. Trim37(-/-) mice recapitulate several features of the human MUL disease and thus provide a good model to study disease pathogenesis related to TRIM37 deficiency, including infertility, non-alcoholic fatty liver disease, cardiomyopathy and tumorigenesis. PMID:27044324

  12. Instrument for stable high temperature Seebeck coefficient and resistivity measurements under controlled oxygen partial pressure

    DOE PAGESBeta

    Ihlefeld, Jon F.; Brown-Shaklee, Harlan James; Sharma, Peter Anand

    2015-04-28

    The transport properties of ceramic materials strongly depend on oxygen activity, which is tuned by changing the partial oxygen pressure (pO2) prior to and during measurement. Within, we describe an instrument for highly stable measurements of Seebeck coefficient and electrical resistivity at temperatures up to 1300 K with controlled oxygen partial pressure. An all platinum construction is used to avoid potential materials instabilities that can cause measurement drift. Two independent heaters are employed to establish a small temperature gradient for Seebeck measurements, while keeping the average temperature constant and avoiding errors associated with pO2-induced drifts in thermocouple readings. Oxygen equilibriummore » is monitored using both an O2 sensor and the transient behavior of the resistance as a proxy. A pO2 range of 10-25–100 atm can be established with appropriate gas mixtures. Seebeck measurements were calibrated against a high purity platinum wire, Pt/Pt–Rh thermocouple wire, and a Bi2Te3 Seebeck coefficient Standard Reference Material. To demonstrate the utility of this instrument for oxide materials we present measurements as a function of pO2 on a 1 % Nb-doped SrTiO3 single crystal, and show systematic changes in properties consistent with oxygen vacancy defect chemistry. Thus, an approximately 11% increase in power factor over a pO2 range of 10-19–10-8 atm at 973 K for the donor-doped single crystals is observed.« less

  13. Instrument for stable high temperature Seebeck coefficient and resistivity measurements under controlled oxygen partial pressure

    SciTech Connect

    Ihlefeld, Jon F.; Brown-Shaklee, Harlan James; Sharma, Peter Anand

    2015-04-28

    The transport properties of ceramic materials strongly depend on oxygen activity, which is tuned by changing the partial oxygen pressure (pO2) prior to and during measurement. Within, we describe an instrument for highly stable measurements of Seebeck coefficient and electrical resistivity at temperatures up to 1300 K with controlled oxygen partial pressure. An all platinum construction is used to avoid potential materials instabilities that can cause measurement drift. Two independent heaters are employed to establish a small temperature gradient for Seebeck measurements, while keeping the average temperature constant and avoiding errors associated with pO2-induced drifts in thermocouple readings. Oxygen equilibrium is monitored using both an O2 sensor and the transient behavior of the resistance as a proxy. A pO2 range of 10-25–100 atm can be established with appropriate gas mixtures. Seebeck measurements were calibrated against a high purity platinum wire, Pt/Pt–Rh thermocouple wire, and a Bi2Te3 Seebeck coefficient Standard Reference Material. To demonstrate the utility of this instrument for oxide materials we present measurements as a function of pO2 on a 1 % Nb-doped SrTiO3 single crystal, and show systematic changes in properties consistent with oxygen vacancy defect chemistry. Thus, an approximately 11% increase in power factor over a pO2 range of 10-19–10-8 atm at 973 K for the donor-doped single crystals is observed.

  14. Control of nitrogenase recovery from oxygen inactivation by ammonia in the cyanobacterium anabaena sp. strain CA (ATCC 33047)

    SciTech Connect

    Smith, R.L.; Van Baalen, C. ); Tabita, F.R. Ohio State Univ., Columbus )

    1990-05-01

    The control of nitrogenase recovery from inactivation by oxygen was studied in Anabaena sp. strain CA (ATCC 33047). Nitrogenase activity (acetylene reduction) in cultures grown in 1% CO{sub 2} in air was inhibited by exposure to 1% CO{sub 2}-99% O{sub 2} and allowed to recover in the presence of high oxygen tensions. Cultures exposed to hyperbaric levels of oxygen in the presence of 10 mM NH{sub 4}NO{sub 3} were incapable of regaining nitrogenase activity, whereas control cultures returned to 65 to 80% of their original activity within about 3 h after exposure to high oxygen tension. In contrast to the regulation of heterocyst differentiation and nitrogenase synthesis, recovery from oxygen inactivation in this organism was shown to be under the control of NH{sub 4}{sup +} rather than NO{sub 3}{sup {minus}}.

  15. Control of nitrogenase recovery from oxygen inactivation by ammonia in the cyanobacterium Anabaena sp. strain CA (ATCC 33047).

    PubMed Central

    Smith, R L; Van Baalen, C; Tabita, F R

    1990-01-01

    The control of nitrogenase recovery from inactivation by oxygen was studied in Anabaena sp. strain CA (ATCC 33047). Nitrogenase activity (acetylene reduction) in cultures grown in 1% CO2 in air was inhibited by exposure to 1% CO2-99% O2 and allowed to recover in the presence of high oxygen tensions. Cultures exposed to hyperbaric levels of oxygen in the presence of 10 mM NH4NO3 were incapable of regaining nitrogenase activity, whereas control cultures returned to 65 to 80% of their original activity within about 3 h after exposure to high oxygen tension. In contrast to the regulation of heterocyst differentiation and nitrogenase synthesis, recovery from oxygen inactivation in this organism was shown to be under the control of NH4+ rather than NO3-. PMID:2110151

  16. Advancements in oxygen generation and humidity control by water vapor electrolysis

    NASA Technical Reports Server (NTRS)

    Heppner, D. B.; Sudar, M.; Lee, M. C.

    1988-01-01

    Regenerative processes for the revitalization of manned spacecraft atmospheres or other manned habitats are essential for realization of long-term space missions. These processes include oxygen generation through water electrolysis. One promising technique of water electrolysis is the direct conversion of the water vapor contained in the cabin air to oxygen. This technique is the subject of the present program on water vapor electrolysis development. The objectives were to incorporate technology improvements developed under other similar electrochemical programs and add new ones; design and fabricate a mutli-cell electrochemical module and a testing facility; and demonstrate through testing the improvements. Each aspect of the water vapor electrolysis cell was reviewed. The materials of construction and sizing of each element were investigated analytically and sometime experimentally. In addition, operational considerations such as temperature control in response to inlet conditions were investigated. Three specific quantitative goals were established.

  17. Astronaut Charles Conrad trims hair of Astronaut Paul Weitz

    NASA Technical Reports Server (NTRS)

    1973-01-01

    Astronaut Charles Conrad Jr., Skylab 2 commander, trims the hair of Astronaut Paul J. Weitz, Skylab 2 pilot, during the 28-day Skylab 2 mission in Earth orbit. They are in the crew quarters wardroom of the Orbital Workshop of the Skylab 1 and 2 space station. Weitz is holding a vacuum hose in his right hand. This picture was taken by Scientist-Astronaut Joseph P. Kerwin, Skylab 2 science pilot.

  18. Measurement of axial injection displacement with trim coil current unbalance

    NASA Astrophysics Data System (ADS)

    Covo, Michel Kireeff

    2014-08-01

    The Dee probe used for measuring internal radial beam intensity shows large losses inside the radius of 20 cm of the 88 in. cyclotron. The current of the top and bottom innermost trim coil 1 is unbalanced to study effects of the axial injection displacement. A beam profile monitor images the ion beam bunches, turn by turn. The experimental bunch center of mass position is compared with calculations of the magnetic mirror effect displacement and shows good agreement.

  19. Measurement of axial injection displacement with trim coil current unbalance

    SciTech Connect

    Covo, Michel Kireeff

    2014-08-15

    The Dee probe used for measuring internal radial beam intensity shows large losses inside the radius of 20 cm of the 88 in. cyclotron. The current of the top and bottom innermost trim coil 1 is unbalanced to study effects of the axial injection displacement. A beam profile monitor images the ion beam bunches, turn by turn. The experimental bunch center of mass position is compared with calculations of the magnetic mirror effect displacement and shows good agreement.

  20. A study on solid modelling with surface trimming method

    NASA Astrophysics Data System (ADS)

    Hung, Ching-Yun; Chang, San-Cheng

    1993-07-01

    This paper proposes a Surface Trimming Method based on the intersection curves between free-form surfaces so that a complex solid model with several primitive surfaces can be constructed. These solid models will not only be used by the mechanical engineering industry to design and analyze conventional mechanical parts, but will also be used by the civil engineers to design and analyze structures of irregular shape. The scope of solid modelling application is thus enhanced.

  1. Temperature, oxygen, and vegetation controls on decomposition in a James Bay peatland

    NASA Astrophysics Data System (ADS)

    Philben, Michael; Holmquist, James; MacDonald, Glen; Duan, Dandan; Kaiser, Karl; Benner, Ronald

    2015-06-01

    The biochemical composition of a peat core from James Bay Lowland, Canada, was used to assess the extent of peat decomposition and diagenetic alteration. Our goal was to identify environmental controls on peat decomposition, particularly its sensitivity to naturally occurring changes in temperature, oxygen exposure time, and vegetation. All three varied substantially during the last 7000 years, providing a natural experiment for evaluating their effects on decomposition. The bottom 50 cm of the core formed during the Holocene Climatic Optimum (~7000-4000 years B.P.), when mean annual air temperature was likely 1-2°C warmer than present. A reconstruction of the water table level using testate amoebae indicated oxygen exposure time was highest in the subsequent upper portion of the core between 150 and 225 cm depth (from ~2560 to 4210 years B.P.) and the plant community shifted from mostly Sphagnum to vascular plant dominance. Several independent biochemical indices indicated that decomposition was greatest in this interval. Hydrolysable amino acid yields, hydroxyproline yields, and acid:aldehyde ratios of syringyl lignin phenols were higher, while hydrolysable neutral sugar yields and carbon:nitrogen ratios were lower in this zone of both vascular plant vegetation and elevated oxygen exposure time. Thus, peat formed during the Holocene Climatic Optimum did not appear to be more extensively decomposed than peat formed during subsequent cooler periods. Comparison with a core from the West Siberian Lowland, Russia, indicates that oxygen exposure time and vegetation are both important controls on decomposition, while temperature appears to be of secondary importance. The low apparent sensitivity of decomposition to temperature is consistent with recent observations of a positive correlation between peat accumulation rates and mean annual temperature, suggesting that contemporary warming could enhance peatland carbon sequestration, although this could be offset by an

  2. Trim28 Haploinsufficiency Triggers Bi-stable Epigenetic Obesity

    PubMed Central

    Dalgaard, Kevin; Landgraf, Kathrin; Heyne, Steffen; Lempradl, Adelheid; Longinotto, John; Gossens, Klaus; Ruf, Marius; Orthofer, Michael; Strogantsev, Ruslan; Selvaraj, Madhan; Lu, Tess Tsai-Hsiu; Casas, Eduard; Teperino, Raffaele; Surani, M. Azim; Zvetkova, Ilona; Rimmington, Debra; Tung, Y.C. Loraine; Lam, Brian; Larder, Rachel; Yeo, Giles S.H.; O’Rahilly, Stephen; Vavouri, Tanya; Whitelaw, Emma; Penninger, Josef M.; Jenuwein, Thomas; Cheung, Ching-Lung; Ferguson-Smith, Anne C.; Coll, Anthony P.; Körner, Antje; Pospisilik, J. Andrew

    2016-01-01

    Summary More than one-half billion people are obese, and despite progress in genetic research, much of the heritability of obesity remains enigmatic. Here, we identify a Trim28-dependent network capable of triggering obesity in a non-Mendelian, “on/off” manner. Trim28+/D9 mutant mice exhibit a bi-modal body-weight distribution, with isogenic animals randomly emerging as either normal or obese and few intermediates. We find that the obese-“on” state is characterized by reduced expression of an imprinted gene network including Nnat, Peg3, Cdkn1c, and Plagl1 and that independent targeting of these alleles recapitulates the stochastic bi-stable disease phenotype. Adipose tissue transcriptome analyses in children indicate that humans too cluster into distinct sub-populations, stratifying according to Trim28 expression, transcriptome organization, and obesity-associated imprinted gene dysregulation. These data provide evidence of discrete polyphenism in mouse and man and thus carry important implications for complex trait genetics, evolution, and medicine. Video Abstract PMID:26824653

  3. Oxygenated phosphine fumigation for control of Epiphyas postvittana (Lepidoptera: Tortricidae) eggs on lettuce.

    PubMed

    Liu, Samuel S; Liu, Yong-Biao; Simmons, Gregory S

    2014-08-01

    Light brown apple moth, Epiphyas postvittana (Walker), is a quarantined pest in most countries. Its establishment in California and potential spread to other parts of the state and beyond make it urgent to develop effective postharvest treatments to control the pest on fresh commodities. Fumigation with cylindered phosphine at low temperature has emerged to be a practical methyl bromide alternative treatment for postharvest pest control on fresh commodities. However, its use to control E. postvittana eggs on sensitive commodities such as lettuce is problematic. E. postvittana eggs are tolerant of phosphine and long phosphine treatment also injures lettuce. In the current study, E. postvittana eggs were subjected to oxygenated phosphine fumigations to develop an effective treatment at a low storage temperature of 2 degrees C. In addition, soda lime as a CO2 absorbent was tested to determine its effects in reducing and preventing injuries to lettuce associated with phosphine fumigations. Three-day fumigation with 1,000 ppm phosphine under 60% O2 achieved 100% mortality of E. postvittana eggs in small-scale laboratory tests. In the presence of the CO2 absorbent, a 3-d large-scale fumigation of lettuce with 1,700 ppm phosphine under 60% O2 resulted in a relative egg mortality of 99.96% without any negative effect on lettuce quality. The 3-d fumigation treatment without the CO2 absorbent, however, resulted in significant injuries to lettuce and consequential quality reductions. The study demonstrated that oxygenated phosphine fumigation has the potential to control E. postvittana eggs and the CO2 absorbent has the potential to prevent injuries and quality reductions of lettuce associated with long-term oxygenated phosphine fumigation.

  4. Swine TRIM21 restricts FMDV infection via an intracellular neutralization mechanism.

    PubMed

    Fan, Wenchun; Zhang, Dong; Qian, Ping; Qian, Suhong; Wu, Mengge; Chen, Huanchun; Li, Xiangmin

    2016-03-01

    The tripartite motif protein 21 (TRIM21) is a ubiquitously expressed E3 ubiquitin ligase and an intracellular antibody receptor. TRIM21 mediates antibody-dependent intracellular neutralization (ADIN) in cytosol and provides an intracellular immune response to protect host defense against pathogen infection. In this study, swine TRIM21 (sTRIM21) was cloned and its role in ADIN was investigated. The expression of sTRIM21 is induced by type I interferon in PK-15 cells. sTRIM21 restricts FMDV infection in the presence of FMDV specific antibodies. Furthermore, sTRIM21 interacts with Fc fragment of swine immunoglobulin G (sFc) fused VP1 of FMDV and thereby causing its degradation. Both the RING and SPRY domains are essential for sTRIM21 to degrade sFc-fused VP1. These results suggest that the intracellular neutralization features of FMDV contribute to the antiviral activity of sTRIM21. sTRIM21 provide another intracellular mechanism to inhibit FMDV infection in infected cells.

  5. Contribution of SUMO-interacting motifs and SUMOylation to the antiretroviral properties of TRIM5α.

    PubMed

    Brandariz-Nuñez, Alberto; Roa, Amanda; Valle-Casuso, Jose Carlos; Biris, Nikolaos; Ivanov, Dmitri; Diaz-Griffero, Felipe

    2013-01-20

    Recent findings suggested that the SUMO-interacting motifs (SIMs) present in the human TRIM5α (TRIM5α(hu)) protein play an important role in the ability of TRIM5α(hu) to restrict N-MLV. Here we explored the role of SIMs in the ability of rhesus TRIM5α (TRIM5α(rh)) to restrict HIV-1, and found that TRIM5α(rh) SIM mutants IL376KK (SIM1mut) and VI405KK (SIM2mut) completely lost their ability to block HIV-1 infection. Interestingly, these mutants also lost the recently described property of TRIM5α(rh) to shuttle into the nucleus. Analysis of these variants revealed that they are unable to interact with the HIV-1 core, which might explain the reason that these variants are not active against HIV-1. Furthermore, NMR titration experiments to assay the binding between the PRYSPRY domain of TRIM5α(rh) and the small ubiquitin-like modifier 1(SUMO-1) revealed no interaction. In addition, we examined the role of SUMOylation in restriction, and find out that inhibition of SUMOylation by the adenoviral protein Gam1 did not alter the retroviral restriction ability of TRIM5α. Overall, our results do not support a role for SIMs or SUMOylation in the antiviral properties of TRIM5α.

  6. Clinical significance and prognostic value of TRIM24 expression in esophageal squamous cell carcinoma

    PubMed Central

    Chi, Jun; Yang, Qing; Xie, Xiao-Feng; Yang, Xian-Zi; Zhang, Mei-Yin; Wang, Hui-Yun; Xu, Guo-Liang

    2016-01-01

    Tripartite motif-containing 24 (TRIM24), a member of the transcription intermediary factor 1 family, is defined as a co-regulator with several nuclear receptors, such as RARα. TRIM24 has been reported to be involved in many cancers. In this study, we aimed to investigate the expression pattern and prognostic significance of TRIM24 and its relationship with RARα in esophageal squamous cell cancer (ESCC). Both mRNA and protein expression levels of TRIM24 were found to be significantly decreased in ESCC, as judged by qRT-PCR and western blot. Immunohistochemistry staining shows that the reduced TRIM24 protein is associated with lymph node metastasis (P=0.024), advance pathological TNM (pTNM) stage (P=0.046) and recurrence/metastasis (P=0.001). Upregulated TRIM24 protein predicts longer overall survival and disease-free survival (both P<0.001) and is an independent predictor for good prognosis (HR, 0.519; 95%CI, 0.341-0.788; P=0.002). TRIM24 expression has been proven remarkably to improve prediction of survival of pTNM stage in ESCC patients, especially in stage I and II. However, no significant relationship was found between TRIM24 and RARα expression levels. In conclusion, reduced TRIM24 protein is associated with poor survival in ESCC patients, suggesting TRIM24 protein is a potential prognostic biomarker for ESCC. PMID:27689360

  7. Swine TRIM21 restricts FMDV infection via an intracellular neutralization mechanism.

    PubMed

    Fan, Wenchun; Zhang, Dong; Qian, Ping; Qian, Suhong; Wu, Mengge; Chen, Huanchun; Li, Xiangmin

    2016-03-01

    The tripartite motif protein 21 (TRIM21) is a ubiquitously expressed E3 ubiquitin ligase and an intracellular antibody receptor. TRIM21 mediates antibody-dependent intracellular neutralization (ADIN) in cytosol and provides an intracellular immune response to protect host defense against pathogen infection. In this study, swine TRIM21 (sTRIM21) was cloned and its role in ADIN was investigated. The expression of sTRIM21 is induced by type I interferon in PK-15 cells. sTRIM21 restricts FMDV infection in the presence of FMDV specific antibodies. Furthermore, sTRIM21 interacts with Fc fragment of swine immunoglobulin G (sFc) fused VP1 of FMDV and thereby causing its degradation. Both the RING and SPRY domains are essential for sTRIM21 to degrade sFc-fused VP1. These results suggest that the intracellular neutralization features of FMDV contribute to the antiviral activity of sTRIM21. sTRIM21 provide another intracellular mechanism to inhibit FMDV infection in infected cells. PMID:26777733

  8. TRIM32 modulates pluripotency entry and exit by directly regulating Oct4 stability

    PubMed Central

    Bahnassawy, Lamia’a; Perumal, Thanneer M.; Gonzalez-Cano, Laura; Hillje, Anna-Lena; Taher, Leila; Makalowski, Wojciech; Suzuki, Yutaka; Fuellen, Georg; Sol, Antonio del; Schwamborn, Jens Christian

    2015-01-01

    Induced pluripotent stem cells (iPSCs) have revolutionized the world of regenerative medicine; nevertheless, the exact molecular mechanisms underlying their generation and differentiation remain elusive. Here, we investigated the role of the cell fate determinant TRIM32 in modulating such processes. TRIM32 is essential for the induction of neuronal differentiation of neural stem cells by poly-ubiquitinating cMyc to target it for degradation resulting in inhibition of cell proliferation. To elucidate the role of TRIM32 in regulating somatic cell reprogramming we analysed the capacity of TRIM32-knock-out mouse embryonic fibroblasts (MEFs) in generating iPSC colonies. TRIM32 knock-out MEFs produced a higher number of iPSC colonies indicating a role for TRIM32 in inhibiting this cellular transition. Further characterization of the generated iPSCs indicated that the TRIM32 knock-out iPSCs show perturbed differentiation kinetics. Additionally, mathematical modelling of global gene expression data revealed that during differentiation an Oct4 centred network in the wild-type cells is replaced by an E2F1 centred network in the TRIM32 deficient cells. We show here that this might be caused by a TRIM32-dependent downregulation of Oct4. In summary, the data presented here reveal that TRIM32 directly regulates at least two of the four Yamanaka Factors (cMyc and Oct4), to modulate cell fate transitions. PMID:26307407

  9. Hydrodynamic controls on oxygen dynamics in a riverine salt wedge estuary, the Yarra River estuary, Australia

    NASA Astrophysics Data System (ADS)

    Bruce, L. C.; Cook, P. L. M.; Teakle, I.; Hipsey, M. R.

    2014-04-01

    Oxygen depletion in coastal and estuarine waters has been increasing rapidly around the globe over the past several decades, leading to decline in water quality and ecological health. In this study we apply a numerical model to understand how salt wedge dynamics, changes in river flow and temperature together control oxygen depletion in a micro-tidal riverine estuary, the Yarra River estuary, Australia. Coupled physical-biogeochemical models have been previously applied to study how hydrodynamics impact upon seasonal hypoxia; however, their application to relatively shallow, narrow riverine estuaries with highly transient patterns of river inputs and sporadic periods of oxygen depletion has remained challenging, largely due to difficulty in accurately simulating salt wedge dynamics in morphologically complex areas. In this study we overcome this issue through application of a flexible mesh 3-D hydrodynamic-biogeochemical model in order to predict the extent of salt wedge intrusion and consequent patterns of oxygen depletion. The extent of the salt wedge responded quickly to the sporadic riverine flows, with the strength of stratification and vertical density gradients heavily influenced by morphological features corresponding to shallow points in regions of tight curvature ("horseshoe" bends). The spatiotemporal patterns of stratification led to the emergence of two "hot spots" of anoxia, the first downstream of a shallow region of tight curvature and the second downstream of a sill. Whilst these areas corresponded to regions of intense stratification, it was found that antecedent conditions related to the placement of the salt wedge played a major role in the recovery of anoxic regions following episodic high flow events. Furthermore, whilst a threshold salt wedge intrusion was a requirement for oxygen depletion, analysis of the results allowed us to quantify the effect of temperature in determining the overall severity and extent of hypoxia and anoxia. Climate

  10. CONTROLLED FIELD STUDY ON THE USE OF NITRATE AND OXYGEN FOR BIOREMEDIATION OF A GASOLINE SOURCE ZONE

    EPA Science Inventory

    Controlled releases of unleaded gasoline were used to evaluate the biotransformation of the soluble aromatic hydrocarbons (benzene, toluene, ethylbenzene, xylene isomers, trimethylbenzene isomers, and naphthalene) within a source zone using nitrate and oxygen as electron accepto...

  11. Composition-controlled PtCo alloy nanocubes with tuned electrocatalytic activity for oxygen reduction.

    PubMed

    Choi, Sang-Il; Lee, Su-Un; Kim, Woo Youn; Choi, Ran; Hong, Kwangwoo; Nam, Ki Min; Han, Sang Woo; Park, Joon T

    2012-11-01

    Modification of the electronic structure and lattice contraction of Pt alloy nanocatalysts through control over their morphology and composition has been a crucial issue for improving their electrocatalytic oxygen reduction reaction (ORR) activity. In the present work, we synthesized PtCo alloy nanocubes with controlled compositions (Pt(x)Co NCs, x = 2, 3, 5, 7, and 9) by regulating the ratio of surfactants and the amount of Co precursor to elucidate the effect of the composition of nanocatalysts on their ORR activity. Pt(x)Co NCs had a Pt-skin structure after electrochemical treatment. The electrocatalysis experiments revealed a strong correlation between ORR activity and Co composition. Pt₃Co NCs exhibited the best ORR performance among the various Pt(x)Co NCs. From density functional theory calculations, a typical volcano-type relationship was established between ORR activity and oxygen binding energy (E(OB)) on NC surfaces, which showed that Pt₃Co NCs had the optimal E(OB) to achieve the maximum ORR activity. X-ray photoelectron spectroscopy and X-ray diffraction measurements demonstrated that the electronic structure and lattice contraction of the Pt(x)Co NCs could be tuned by controlling the composition of NCs, which are highly correlated with the trends of E(OB) change.

  12. Laser controlled singlet oxygen generation in mitochondria to promote mitochondrial DNA replication in vitro.

    PubMed

    Zhou, Xin; Wang, Yupei; Si, Jing; Zhou, Rong; Gan, Lu; Di, Cuixia; Xie, Yi; Zhang, Hong

    2015-11-18

    Reports have shown that a certain level of reactive oxygen species (ROS) can promote mitochondrial DNA (mtDNA) replication. However, it is unclear whether it is the mitochondrial ROS that stimulate mtDNA replication and this requires further investigation. Here we employed a photodynamic system to achieve controlled mitochondrial singlet oxygen ((1)O2) generation. HeLa cells incubated with 5-aminolevulinic acid (ALA) were exposed to laser irradiation to induce (1)O2 generation within mitochondria. Increased mtDNA copy number was detected after low doses of 630 nm laser light in ALA-treated cells. The stimulated mtDNA replication was directly linked to mitochondrial (1)O2 generation, as verified using specific ROS scavengers. The stimulated mtDNA replication was regulated by mitochondrial transcription factor A (TFAM) and mtDNA polymerase γ. MtDNA control region modifications were induced by (1)O2 generation in mitochondria. A marked increase in 8-Oxoguanine (8-oxoG) level was detected in ALA-treated cells after irradiation. HeLa cell growth stimulation and G1-S cell cycle transition were also observed after laser irradiation in ALA-treated cells. These cellular responses could be due to a second wave of ROS generation detected in mitochondria. In summary, we describe a controllable method of inducing mtDNA replication in vitro.

  13. Laser controlled singlet oxygen generation in mitochondria to promote mitochondrial DNA replication in vitro

    PubMed Central

    Zhou, Xin; Wang, Yupei; Si, Jing; Zhou, Rong; Gan, Lu; Di, Cuixia; Xie, Yi; Zhang, Hong

    2015-01-01

    Reports have shown that a certain level of reactive oxygen species (ROS) can promote mitochondrial DNA (mtDNA) replication. However, it is unclear whether it is the mitochondrial ROS that stimulate mtDNA replication and this requires further investigation. Here we employed a photodynamic system to achieve controlled mitochondrial singlet oxygen (1O2) generation. HeLa cells incubated with 5-aminolevulinic acid (ALA) were exposed to laser irradiation to induce 1O2 generation within mitochondria. Increased mtDNA copy number was detected after low doses of 630 nm laser light in ALA-treated cells. The stimulated mtDNA replication was directly linked to mitochondrial 1O2 generation, as verified using specific ROS scavengers. The stimulated mtDNA replication was regulated by mitochondrial transcription factor A (TFAM) and mtDNA polymerase γ. MtDNA control region modifications were induced by 1O2 generation in mitochondria. A marked increase in 8-Oxoguanine (8-oxoG) level was detected in ALA-treated cells after irradiation. HeLa cell growth stimulation and G1-S cell cycle transition were also observed after laser irradiation in ALA-treated cells. These cellular responses could be due to a second wave of ROS generation detected in mitochondria. In summary, we describe a controllable method of inducing mtDNA replication in vitro. PMID:26577055

  14. Controls on in situ oxygen and dissolved inorganic carbon dynamics in peats of a temperate fen

    NASA Astrophysics Data System (ADS)

    Estop-AragonéS, Cristian; Knorr, Klaus-Holger; Blodau, Christian

    2012-06-01

    Changes in hydrological conditions are expected and may alter carbon cycling in peatlands. Peat aeration with water table change has not commonly been investigated, and the water table is often assumed to constitute the oxic-anoxic boundary in peat. We analyzed temperature, moisture, oxygen (O2), and carbon dioxide (CO2) concentrations in profiles of a temperate fen during two seasons. A drying-rewetting cycle and flooding were induced and compared to controls. The response of moisture and water table position varied greatly and was related to gradients of peat compaction and ash content. Background drought raised air-filled porosity (AFP) to a maximum of 15%-38% in shallow peat and experimental drought up to 50%. Decline in water table and soil moisture broadly led to O2 penetration and CO2 degassing, and rewetting and flooding led to anoxic conditions and CO2 accumulation in peat pore water. In dense peat with ≥20% ash content the unsaturated zone remained partly low in oxygen, however, and up to 5% AFP and 20 cm above water table O2 concentrations frequently remained below 50 μmol L-1. Moderately intense and short drying did not induce substantial oxygen penetration in the compacted soil profiles. The likelihood of the presence of oxygen in the peat was predicted by logistic regression using water table and ash content or bulk density as predictors (p < 0.0005). The model is potentially useful for predicting the position of the redoxcline in peat deposits and may assist in improving statistical models of trace gas emission from peatlands.

  15. A System for Controlling the Oxygen Content of a Gas Produced by Combustion

    NASA Technical Reports Server (NTRS)

    Singh, J. J.; Davis, W. T.; Puster, R. L. (Inventor)

    1984-01-01

    A mixture of air, CH4 and OH(2) is burned in a combustion chamber to produce a product gas in the test section. The OH(2) content of the product gas is compared with the OH(2) content of reference air in an OH(2) sensor. If there is a difference an error signal is produced at the output of a control circuit which by the means of a solenoid valve, regulates the flow of OH(2) into the combustion chamber to make the error signal zero. The product gas in the test section has the same oxygen content as air.

  16. Oxygen analyzer

    DOEpatents

    Benner, William H.

    1986-01-01

    An oxygen analyzer which identifies and classifies microgram quantities of oxygen in ambient particulate matter and for quantitating organic oxygen in solvent extracts of ambient particulate matter. A sample is pyrolyzed in oxygen-free nitrogen gas (N.sub.2), and the resulting oxygen quantitatively converted to carbon monoxide (CO) by contact with hot granular carbon (C). Two analysis modes are made possible: (1) rapid determination of total pyrolyzable oxygen obtained by decomposing the sample at 1135.degree. C., or (2) temperature-programmed oxygen thermal analysis obtained by heating the sample from room temperature to 1135.degree. C. as a function of time. The analyzer basically comprises a pyrolysis tube containing a bed of granular carbon under N.sub.2, ovens used to heat the carbon and/or decompose the sample, and a non-dispersive infrared CO detector coupled to a mini-computer to quantitate oxygen in the decomposition products and control oven heating.

  17. GREENHOUSE GAS EMISSIONS CONTROL BY OXYGEN FIRING IN CIRCULATING FLUIDIZED BED BOILERS

    SciTech Connect

    Nsakala ya Nsakala; Gregory N. Liljedahl

    2003-05-15

    of Energy National Energy Technology Laboratory (DOE) in 2001 to carry out a project entitled ''Greenhouse Gas Emissions Control by Oxygen Firing in Circulating Fluidized Bed Boilers.'' This two-phased project is in effect from September 28, 2001, to October 27, 2004. (U.S. DOE NETL Cooperative Agreement No. DE-FC26-01NT41146). Phase I consisted of an evaluation of the technical feasibility and economics of alternate CO{sub 2} capture technologies applied to Greenfield US coal-fired electric generation power plants, and supporting bench-scale testing. And Phase II consists of pilot-scale testing, supporting a refined performance and economic evaluation of the oxygen-fired AFC concept. Phase I, detailed in this report, entails a comprehensive study evaluating the technical feasibility and economics of alternate CO{sub 2} capture technologies applied to Greenfield US coal-fired electric generation power plants. Thirteen separate but related cases (listed below), representing various levels of technology development, were evaluated as described herein. The first seven cases represent coal combustion cases in CFB type equipment. The next four cases represent Integrated Gasification Combined Cycle (IGCC) systems. The last two cases represent advanced Chemical Looping systems, which were completely paid for by ALSTOM and included herein for completeness.

  18. Oxygen-enable control of Dzyaloshinskii-Moriya Interaction in Fe/Ir(001) bilayers

    NASA Astrophysics Data System (ADS)

    Belabbes, Abderrezak; Bihlmayer, Gustav; Blügel, Stefan; Manchon, Aurelien

    2015-03-01

    Using relativistic first principles calculations, we demonstrate that the magnitude and sign of the Dzyaloshinskii-Moriya inter action(DMI) of Fe/Ir(001) interface can be controlled by tuning the coverage of the oxygen capping layer, which changes the spin-wave length and the depth of the energy minimum. In addition, we explain how the magnetic interactions [Exchange inter action, DMI, and the magnetocrystalline anisotropy (MAE)]at such transition metal interface are modified in the presence of Oxygen, which might prevent any stable magnetic order due to the small energy scale. We observe a change sign of the DMI when the coverage exceeds 50%. In particular, we found that due to the C4 breaking symmetry and the large spin-orbit interaction of the Ir substrate the DMI exceeds a critical strength and competes with the exchange interaction and causes homochiral magnetic structures. This study reveals that in realistic systems capped by an oxide, such as HM/F/MOx (HM is a heavy metal, F a ferromagnet an MOx=MgOx, CoOx, TaOx etc., the DMI can be tuned by changing the oxidation conditions of the capping layer, offering a convenient way to control it. Therefore, understanding of the these phenomena may have impact in the context of facilitating applications in spintronics.

  19. Mechanical control of magnetism in oxygen deficient perovskite SrTiO3.

    PubMed

    Zhang, Yajun; Wang, Jie; Sahoo, M P K; Shimada, Takahiro; Kitamura, Takayuki

    2015-10-28

    Mechanical control of magnetism in perovskite oxides is an important and promising approach in spintronics. Based on the first-principles calculations, we demonstrate that a negative pressure leads to a great enhancement of magnetic moment in deficient SrTiO3 with oxygen vacancies, whereas a positive pressure results in the gradual disappearance of magnetism. Spin charge density, Bader charge analysis and electronic density of states successfully elucidate the origin and underlying physics of the enhancement and disappearance of magnetism. It is found that the split electronic states of dz(2), dyz and dzx in the 3d orbitals of Ti atoms remarkably contribute to the occupancy of majority spin states under negative pressure, which induces a large magnetic moment. Under positive pressure, however, the equal occupancy of both majority and minority t2g and eg states leads to the disappearance of magnetization. In addition, both negative and positive pressures can largely lower the vacancy formation enthalpy, suggesting that the oxygen vacancy is preferable with pressure. Our findings may provide a mechanism to achieve the pressure control of magnetization in nonmagnetic perovskite oxides.

  20. Method of controlling injection of oxygen into hydrogen-rich fuel cell feed stream

    DOEpatents

    Meltser, Mark Alexander; Gutowski, Stanley; Weisbrod, Kirk

    2001-01-01

    A method of operating a H.sub.2 --O.sub.2 fuel cell fueled by hydrogen-rich fuel stream containing CO. The CO content is reduced to acceptable levels by injecting oxygen into the fuel gas stream. The amount of oxygen injected is controlled in relation to the CO content of the fuel gas, by a control strategy that involves (a) determining the CO content of the fuel stream at a first injection rate, (b) increasing the O.sub.2 injection rate, (c) determining the CO content of the stream at the higher injection rate, (d) further increasing the O.sub.2 injection rate if the second measured CO content is lower than the first measured CO content or reducing the O.sub.2 injection rate if the second measured CO content is greater than the first measured CO content, and (e) repeating steps a-d as needed to optimize CO consumption and minimize H.sub.2 consumption.

  1. Room temperature alcohol sensing by oxygen vacancy controlled TiO2 nanotube array

    NASA Astrophysics Data System (ADS)

    Hazra, A.; Dutta, K.; Bhowmik, B.; Chattopadhyay, P. P.; Bhattacharyya, P.

    2014-08-01

    Oxygen vacancy (OV) controlled TiO2 nanotubes, having diameters of 50-70 nm and lengths of 200-250 nm, were synthesized by electrochemical anodization in the mixed electrolyte comprising NH4F and ethylene glycol with selective H2O content. The structural evolution of TiO2 nanoforms has been studied by field emission scanning electron microscopy. Variation in the formation of OVs with the variation of the structure of TiO2 nanoforms has been evaluated by photoluminescence and X-ray photoelectron spectroscopy. The sensor characteristics were correlated to the variation of the amount of induced OVs in the nanotubes. The efficient room temperature sensing achieved by the control of OVs of TiO2 nanotube array has paved the way for developing fast responding alcohol sensor with corresponding response magnitude of 60.2%, 45.3%, and 36.5% towards methanol, ethanol, and 2-propanol, respectively.

  2. Dynamic controlled atmosphere and ultralow oxygen storage on 'Gala' mutants quality maintenance.

    PubMed

    Thewes, Fabio Rodrigo; Both, Vanderlei; Brackmann, Auri; Weber, Anderson; de Oliveira Anese, Rogerio

    2015-12-01

    The aim of the present work was to compare the effect of ultralow oxygen (ULO) with dynamic controlled atmosphere (DCA) and controlled atmosphere (CA) on the post storage quality of 'Royal Gala' and 'Galaxy' apples after long-term storage. Two experiments were carried out with 'Royal Gala' and 'Galaxy' apples, in the years 2012 and 2013, respectively. A higher internal ethylene concentration was observed in fruits stored under CA; intermediate concentration in fruits under ULO; and the lowest by fruits stored under DCA-CF (DCA based on chlorophyll fluorescence). Flesh firmness was higher in fruits stored under DCA-CF and ULO differing from CA, in the year 2012, but in 2013 fruits stored under ULO showed the highest flesh firmness, differing from CA fruits. DCA-CF is efficient in quality maintenance of 'Royal Gala' and 'Galaxy' apples. Both 'Gala' mutants stored under ULO show a similar quality maintenance to those stored under DCA-CF. PMID:26041165

  3. View of Mission Control Center during the Apollo 13 oxygen cell failure

    NASA Technical Reports Server (NTRS)

    1970-01-01

    Several persons important to the Apollo 13 mission, at consoles in the Mission Operations Control Room of the Mission Control Center (MCC). Seated at consoles, from left to right, are Astronaut Donald K. Slayton, Director of Flight Crew Operations; Astronaut Jack R. Lousma, Shift 3 spacecraft communicator; and Astronaut John W. Young, commander of the Apollo 13 back-up crew. Standing, left to right, are Astronaut Tom K. Mattingly, who was replaced as Apollo 13 command module pilot after it was learned he may come down with measles, and Astronaut Vance D. Brand, Shift 2 spacecraft communicator. Several hours earlier crew members of the Apollo 13 mission reported to MCC that trouble had developed with an oxygen cell in their spacecraft.

  4. Dynamic controlled atmosphere and ultralow oxygen storage on 'Gala' mutants quality maintenance.

    PubMed

    Thewes, Fabio Rodrigo; Both, Vanderlei; Brackmann, Auri; Weber, Anderson; de Oliveira Anese, Rogerio

    2015-12-01

    The aim of the present work was to compare the effect of ultralow oxygen (ULO) with dynamic controlled atmosphere (DCA) and controlled atmosphere (CA) on the post storage quality of 'Royal Gala' and 'Galaxy' apples after long-term storage. Two experiments were carried out with 'Royal Gala' and 'Galaxy' apples, in the years 2012 and 2013, respectively. A higher internal ethylene concentration was observed in fruits stored under CA; intermediate concentration in fruits under ULO; and the lowest by fruits stored under DCA-CF (DCA based on chlorophyll fluorescence). Flesh firmness was higher in fruits stored under DCA-CF and ULO differing from CA, in the year 2012, but in 2013 fruits stored under ULO showed the highest flesh firmness, differing from CA fruits. DCA-CF is efficient in quality maintenance of 'Royal Gala' and 'Galaxy' apples. Both 'Gala' mutants stored under ULO show a similar quality maintenance to those stored under DCA-CF.

  5. TRIM45 negatively regulates NF-{kappa}B-mediated transcription and suppresses cell proliferation

    SciTech Connect

    Shibata, Mio; Sato, Tomonobu; Nukiwa, Ryota; Ariga, Tadashi; Hatakeyama, Shigetsugu

    2012-06-22

    Highlights: Black-Right-Pointing-Pointer NF-{kappa}B plays an important role in cell survival and carcinogenesis. Black-Right-Pointing-Pointer TRIM45 negatively regulates TNF{alpha}-induced NF-{kappa}B-mediated transcription. Black-Right-Pointing-Pointer TRIM45 overexpression suppresses cell growth. Black-Right-Pointing-Pointer TRIM45 acts as a repressor for the NF-{kappa}B signal and regulates cell growth. -- Abstract: The NF-{kappa}B signaling pathway plays an important role in cell survival, immunity, inflammation, carcinogenesis, and organogenesis. Activation of NF-{kappa}B is regulated by several posttranslational modifications including phosphorylation, neddylation and ubiquitination. The NF-{kappa}B signaling pathway is activated by two distinct signaling mechanisms and is strictly modulated by the ubiquitin-proteasome system. It has been reported that overexpression of TRIM45, one of the TRIM family ubiquitin ligases, suppresses transcriptional activities of Elk-1 and AP-1, which are targets of the MAPK signaling pathway. In this study, we showed that TRIM45 also negatively regulates TNF{alpha}-induced NF-{kappa}B-mediated transcription by a luciferase reporter assay and that TRIM45 lacking a RING domain also has an activity to inhibit the NF-{kappa}B signal. Moreover, we found that TRIM45 overexpression suppresses cell growth. These findings suggest that TRIM45 acts as a repressor for the NF-{kappa}B signal and regulates cell growth.

  6. Grouper TRIM13 exerts negative regulation of antiviral immune response against nodavirus.

    PubMed

    Huang, Youhua; Yang, Min; Yu, Yepin; Yang, Ying; Zhou, Linli; Huang, Xiaohong; Qin, Qiwei

    2016-08-01

    The tripartite motif (TRIM)-containing proteins have attracted particular attention to their multiple functions in different biological processes. TRIM13, a member of the TRIM family, is a RING domain-containing E3 ubiquitin ligase which plays critical roles in diverse cellular processes including cell death, cancer and antiviral immunity. In this study, a TRIM13 homolog from orange spotted grouper, Epinephelus coioides (EcTRIM13) was cloned and characterized. The full-length of EcTRIM13 cDNA encoded a polypeptide of 399 amino acids which shared 81% identity with TRIM13 homolog from large yellow croaker (Larimichthys crocea). Amino acid alignment analysis showed that EcTRIM13 contained conserved RING finger and B-box domain. Expression patterns analysis indicated that EcTRIM13 was abundant in liver, spleen, kidney, intestine and gill. Moreover, the transcript of EcTRIM13 in grouper spleen was differently regulated after injection with Singapore grouper iridovirus (SGIV) or polyinosin-polycytidylic acid (poly I:C). Under fluorescence microscopy, we observed the tubular structure in wild type EcTRIM13 transfected cells, but the RING domain mutant resulted in the fluorescence distribution was changed and the bright punctate fluorescence was evenly situated throughout the cytoplasm, suggesting that the RING domain was essential for its accurate localization. Overexpression of EcTRIM13 in vitro obviously increased the replication of red spotted grouper nervous necrosis virus (RGNNV), and the enhancing effect of EcTRIM13 on virus replication was affected by the RING domain. Furthermore, the ectopic expression of EcTRIM13 not only negatively regulated the interferon promoter activity induced by interferon regulator factor (IRF) 3, IRF7, and melanoma differentiation-associated protein 5 (MDA5), but also decreased the expression of several interferon related factors. In addition, the overexpression of EcTRIM13 also differently regulated the transcription of pro

  7. RING domain is essential for the antiviral activity of TRIM25 from orange spotted grouper.

    PubMed

    Yang, Ying; Huang, Youhua; Yu, Yepin; Yang, Min; Zhou, Sheng; Qin, Qiwei; Huang, Xiaohong

    2016-08-01

    Tripartite motif-containing 25 (TRIM25) has been demonstrated to exert crucial roles in the regulation of innate immune signaling. However, the roles of fish TRIM25 in antiviral immune response still remained uncertain. Here, a novel fish TRIM25 gene from orange spotted grouper (EcTRIM25) was cloned and its roles in grouper virus infection were elucidated. EcTRIM25 encoded a 734-aa protein which shared 68% identity to large yellow croaker (Larimichthys crocea). Amino acid alignment showed that EcTRIM25 contained three conserved domains, including a RING-finger domain, a B box/coiled-coil domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM25 was predominantly detected in skin, spleen and intestine. After stimulation with Singapore grouper iridovirus (SGIV) or poly I:C, the relative expression of EcTRIM25 in grouper spleen was significantly increased at the early stage of injection. Subcellular localization analysis showed that EcTRIM25 distributed throughout the cytoplasm in grouper cells. Notably, the deletion RING domain affected its accurate localization and displayed microtubule like structures or bright aggregates in GS cells. After incubation with SGIV or red spotted grouper nervous necrosis virus (RGNNV), overexpression of full length of EcTRIM25 in vitro significantly decreased the viral gene transcription of SGIV and RGNNV. Consistently, the deletion of RING domain obviously affected the inhibitory effect of EcTRIM25. Furthermore, overexpression of EcTRIM25 significantly increased the expression level of interferon related signaling molecules, including interferon regulatory factor (IRF) 3, interferon-induced 35-kDa protein (IFP35), MXI, IRF7 and myeloid differentiation factor 88 (MyD88), suggesting that the positive regulation of interferon immune response by EcTRIM25 might affected RGNNV replication directly. Meanwhile, the expression levels of pro-inflammation cytokines were differently regulated by the ectopic expression of EcTRIM25

  8. TRIM32 Senses and Restricts Influenza A Virus by Ubiquitination of PB1 Polymerase

    PubMed Central

    Fu, Bishi; Wang, Lingyan; Ding, Hao; Schwamborn, Jens C.; Li, Shitao; Dorf, Martin E.

    2015-01-01

    Polymerase basic protein 1 (PB1) is the catalytic core of the influenza A virus (IAV) RNA polymerase complex essential for viral transcription and replication. Understanding the intrinsic mechanisms which block PB1 function could stimulate development of new anti-influenza therapeutics. Affinity purification coupled with mass spectrometry (AP-MS) was used to identify host factors interacting with PB1. Among PB1 interactors, the E3 ubiquitin ligase TRIM32 interacts with PB1 proteins derived from multiple IAV strains. TRIM32 senses IAV infection by interacting with PB1 and translocates with PB1 to the nucleus following influenza infection. Ectopic TRIM32 expression attenuates IAV infection. Conversely, RNAi depletion and knockout of TRIM32 increase susceptibility of tracheal and lung epithelial cells to IAV infection. Reconstitution of trim32-/- mouse embryonic fibroblasts with TRIM32, but not a catalytically inactive mutant, restores viral restriction. Furthermore, TRIM32 directly ubiquitinates PB1, leading to PB1 protein degradation and subsequent reduction of polymerase activity. Thus, TRIM32 is an intrinsic IAV restriction factor which senses and targets the PB1 polymerase for ubiquitination and protein degradation. TRIM32 represents a model of intrinsic immunity, in which a host protein directly senses and counters viral infection in a species specific fashion by directly limiting viral replication. PMID:26057645

  9. RING domain is essential for the antiviral activity of TRIM25 from orange spotted grouper.

    PubMed

    Yang, Ying; Huang, Youhua; Yu, Yepin; Yang, Min; Zhou, Sheng; Qin, Qiwei; Huang, Xiaohong

    2016-08-01

    Tripartite motif-containing 25 (TRIM25) has been demonstrated to exert crucial roles in the regulation of innate immune signaling. However, the roles of fish TRIM25 in antiviral immune response still remained uncertain. Here, a novel fish TRIM25 gene from orange spotted grouper (EcTRIM25) was cloned and its roles in grouper virus infection were elucidated. EcTRIM25 encoded a 734-aa protein which shared 68% identity to large yellow croaker (Larimichthys crocea). Amino acid alignment showed that EcTRIM25 contained three conserved domains, including a RING-finger domain, a B box/coiled-coil domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM25 was predominantly detected in skin, spleen and intestine. After stimulation with Singapore grouper iridovirus (SGIV) or poly I:C, the relative expression of EcTRIM25 in grouper spleen was significantly increased at the early stage of injection. Subcellular localization analysis showed that EcTRIM25 distributed throughout the cytoplasm in grouper cells. Notably, the deletion RING domain affected its accurate localization and displayed microtubule like structures or bright aggregates in GS cells. After incubation with SGIV or red spotted grouper nervous necrosis virus (RGNNV), overexpression of full length of EcTRIM25 in vitro significantly decreased the viral gene transcription of SGIV and RGNNV. Consistently, the deletion of RING domain obviously affected the inhibitory effect of EcTRIM25. Furthermore, overexpression of EcTRIM25 significantly increased the expression level of interferon related signaling molecules, including interferon regulatory factor (IRF) 3, interferon-induced 35-kDa protein (IFP35), MXI, IRF7 and myeloid differentiation factor 88 (MyD88), suggesting that the positive regulation of interferon immune response by EcTRIM25 might affected RGNNV replication directly. Meanwhile, the expression levels of pro-inflammation cytokines were differently regulated by the ectopic expression of EcTRIM25

  10. Grouper TRIM13 exerts negative regulation of antiviral immune response against nodavirus.

    PubMed

    Huang, Youhua; Yang, Min; Yu, Yepin; Yang, Ying; Zhou, Linli; Huang, Xiaohong; Qin, Qiwei

    2016-08-01

    The tripartite motif (TRIM)-containing proteins have attracted particular attention to their multiple functions in different biological processes. TRIM13, a member of the TRIM family, is a RING domain-containing E3 ubiquitin ligase which plays critical roles in diverse cellular processes including cell death, cancer and antiviral immunity. In this study, a TRIM13 homolog from orange spotted grouper, Epinephelus coioides (EcTRIM13) was cloned and characterized. The full-length of EcTRIM13 cDNA encoded a polypeptide of 399 amino acids which shared 81% identity with TRIM13 homolog from large yellow croaker (Larimichthys crocea). Amino acid alignment analysis showed that EcTRIM13 contained conserved RING finger and B-box domain. Expression patterns analysis indicated that EcTRIM13 was abundant in liver, spleen, kidney, intestine and gill. Moreover, the transcript of EcTRIM13 in grouper spleen was differently regulated after injection with Singapore grouper iridovirus (SGIV) or polyinosin-polycytidylic acid (poly I:C). Under fluorescence microscopy, we observed the tubular structure in wild type EcTRIM13 transfected cells, but the RING domain mutant resulted in the fluorescence distribution was changed and the bright punctate fluorescence was evenly situated throughout the cytoplasm, suggesting that the RING domain was essential for its accurate localization. Overexpression of EcTRIM13 in vitro obviously increased the replication of red spotted grouper nervous necrosis virus (RGNNV), and the enhancing effect of EcTRIM13 on virus replication was affected by the RING domain. Furthermore, the ectopic expression of EcTRIM13 not only negatively regulated the interferon promoter activity induced by interferon regulator factor (IRF) 3, IRF7, and melanoma differentiation-associated protein 5 (MDA5), but also decreased the expression of several interferon related factors. In addition, the overexpression of EcTRIM13 also differently regulated the transcription of pro

  11. The interaction between cutaneous and spinal therman inputs in the control of oxygen consumption in the rat.

    PubMed Central

    Banet, M; Hensel, H

    1976-01-01

    1. The effect of thermal stimulation of the spinal cord on the rate of oxygen consumption was studied in five unanaesthetized rats during exposure to various ambient temperatures. 2. In a warm environment, cooling the spinal cord had no effect on the rate of oxygen consumption but in thermoneutral and cold environments the rate of oxygen consumption increased proportionally to the intensity of spinal cooling. Heating the spinal cord decreased the level of oxygen consumption and, if intense enough, suppressed the thermoregulatory increase in metabolic rate. 3. It is concluded that, in the control of oxygen consumption in the rat, the afferent signals from thermal sensors in the spinal cord and skin are added. PMID:978543

  12. (-)-Epicatechin administration and exercising skeletal muscle vascular control and microvascular oxygenation in healthy rats.

    PubMed

    Copp, Steven W; Inagaki, Tadakatsu; White, Michael J; Hirai, Daniel M; Ferguson, Scott K; Holdsworth, Clark T; Sims, Gabrielle E; Poole, David C; Musch, Timothy I

    2013-01-15

    Consumption of the dietary flavanol (-)-epicatechin (EPI) is associated with enhanced endothelial function and augmented skeletal muscle capillarity and mitochondrial volume density. The potential for EPI to improve peripheral vascular function and muscle oxygenation during exercise is unknown. We tested the hypothesis that EPI administration in healthy rats would improve treadmill exercise performance secondary to elevated skeletal muscle blood flow and vascular conductance [VC, blood flow/mean arterial pressure (MAP)] and improved skeletal muscle microvascular oxygenation. Rats received water (control, n = 12) or 4 mg/kg EPI (n = 12) via oral gavage daily for 24 days. Exercise endurance capacity and peak O(2) uptake (Vo(2) peak) were measured via treadmill runs to exhaustion. MAP (arterial catheter) and blood flow (radiolabeled microspheres) were measured and VC was calculated during submaximal treadmill exercise (25 m/min, 5% grade). Spinotrapezius muscle microvascular O(2) pressure (Po(2mv)) was measured (phosphorescence quenching) during electrically induced twitch (1 Hz) contractions. In conscious rats, EPI administration resulted in lower (↓~5%) resting (P = 0.03) and exercising (P = 0.04) MAP. There were no differences in exercise endurance capacity, Vo(2) peak, total exercising hindlimb blood flow (control, 154 ± 13; and EPI, 159 ± 8 ml·min(-1)·100 g(-1), P = 0.68), or VC (control, 1.13 ± 0.10; and EPI, 1.24 ± 0.08 ml·min(-1)·100 g(-1)·mmHg(-1), P = 0.21) between groups. Following anesthesia, EPI resulted in lower MAP (↓~16%) but did not impact resting Po(2mv) or any kinetics parameters (P > 0.05 for all) during muscle contractions compared with control. EPI administration (4 mg·kg(-1)·day(-1)) improved modestly cardiovascular function (i.e., ↓MAP) with no impact on exercise performance, total exercising skeletal muscle blood flow and VC, or contracting muscle microvascular oxygenation in healthy rats.

  13. Isolated resonator gyroscope with isolation trimming using a secondary element

    NASA Technical Reports Server (NTRS)

    Challoner, A. Dorian (Inventor); Shcheglov, Kirill V. (Inventor)

    2006-01-01

    The present invention discloses a resonator gyroscope including an isolated resonator. One or more flexures support the isolated resonator and a baseplate is affixed to the resonator by the flexures. Drive and sense elements are affixed to the baseplate and used to excite the resonator and sense movement of the gyroscope. In addition, at least one secondary element (e.g., another electrode) is affixed to the baseplate and used for trimming isolation of the resonator. The resonator operates such that it transfers substantially no net momentum to the baseplate when the resonator is excited. Typically, the isolated resonator comprises a proof mass and a counterbalancing plate.

  14. Oxygen persufflation as adjunct in liver preservation (OPAL): Study protocol for a randomized controlled trial

    PubMed Central

    2011-01-01

    Background Early graft dysfunction due to preservation/reperfusion injury represents a dramatic event after liver transplantation. Enhancement of donor organ criteria, in order to cope with the ever increasing donor shortage, further increases graft susceptibility to ischemic alterations. Major parts of post-preservation injury, however, occur at the time of warm reperfusion but not during ischemic storage; successful reperfusion of ischemic tissue in turn depends on an adequate redox and intracellular signal homeostasis. The latter has been shown experimentally to be favorably influenced by oxygen persufflation within short time spans. Thus viability of marginally preserved liver grafts could still be augmented by transient hypothermic reconditioning even after normal procurement and static cold storage. The present study is aimed to confirm the conceptual expectations, that hypothermic reconditioning by gaseous oxygen persufflation is a useful method to suppress injurious cellular activation cascades and to improve post-ischemic recovery of marginally preserved liver grafts. Methods/Design OPAL is a prospective single center randomized proof of concept study, including two parallel groups in a total of 116 liver transplant patients. The effect of an in hospital treatment of the isolated liver graft by 2 hours of oxygen persufflation immediately prior to transplantation will be assesses as compared to standard procedure (cold storage without further intervention). The primary endpoint is the peak transaminase serum level (AST) during the first three days after transplantation as a surrogate readout for parenchymal liver injury. Other outcomes comprise patient and graft survival, time of intensive care requirement, hepatic tissue perfusion 1h after revascularisation, early onset of graft dysfunction based on coagulation parameters, as well as the use of a refined scoring-system for initial graft function based on a multi-parameter (AST, ALT, Quick and bilirubin

  15. Local control of skeletal muscle blood flow during exercise: influence of available oxygen

    PubMed Central

    Joyner, Michael J.

    2011-01-01

    Reductions in oxygen availability (O2) by either reduced arterial O2 content or reduced perfusion pressure can have profound influences on the circulation, including vasodilation in skeletal muscle vascular beds. The purpose of this review is to put into context the present evidence regarding mechanisms responsible for the local control of blood flow during acute systemic hypoxia and/or local hypoperfusion in contracting muscle. The combination of submaximal exercise and hypoxia produces a “compensatory” vasodilation and augmented blood flow in contracting muscles relative to the same level of exercise under normoxic conditions. A similar compensatory vasodilation is observed in response to local reductions in oxygen availability (i.e., hypoperfusion) during normoxic exercise. Available evidence suggests that nitric oxide (NO) contributes to the compensatory dilator response under each of these conditions, whereas adenosine appears to only play a role during hypoperfusion. During systemic hypoxia the NO-mediated component of the compensatory vasodilation is regulated through a β-adrenergic receptor mechanism at low-intensity exercise, while an additional (not yet identified) source of NO is likely to be engaged as exercise intensity increases during hypoxia. Potential candidates for stimulating and/or interacting with NO at higher exercise intensities include prostaglandins and/or ATP. Conversely, prostaglandins do not appear to play a role in the compensatory vasodilation during exercise with hypoperfusion. Taken together, the data for both hypoxia and hypoperfusion suggest NO is important in the compensatory vasodilation seen when oxygen availability is limited. This is important from a basic biological perspective and also has pathophysiological implications for diseases associated with either hypoxia or hypoperfusion. PMID:21885800

  16. Identification of key parameters controlling dissolved oxygen migration and attenuation in fractured crystalline rocks.

    PubMed

    Spiessl, S M; MacQuarrie, K T B; Mayer, K U

    2008-01-28

    In the crystalline rocks of the Canadian Shield, geochemical conditions are currently reducing at depths of 500-1000 m. However, during future glacial periods, altered hydrologic conditions could potentially result in enhanced recharge of glacial melt water containing a relatively high concentration of dissolved oxygen (O2). It is therefore of interest to investigate the physical and geochemical processes, including naturally-occurring redox reactions, that may control O2 ingress. In this study, the reactive transport code MIN3P is used in combination with 2k factorial analyses to identify the most important parameters controlling oxygen migration and attenuation in fractured crystalline rocks. Scenarios considered are based on simplified conceptual models that include a single vertical fracture, or a fracture zone, contained within a rock matrix that extends from the ground surface to a depth of 500 m. Consistent with field observations, Fe(II)-bearing minerals are present in the fractures (i.e. chlorite) and the rock matrix (biotite and small quantities of pyrite). For the parameter ranges investigated, results indicate that for the single fracture case, the most influential factors controlling dissolved O2 ingress are flow velocity in the fracture, fracture aperture, and the biotite reaction rate in the rock matrix. The most important parameters for the fracture zone simulations are flow velocity in the individual fractures, pO2 in the recharge water, biotite reaction rate, and to a lesser degree the abundance and reactivity of chlorite in the fracture zone, and the fracture zone width. These parameters should therefore receive increased consideration during site characterization, and in the formulation of site-specific models intended to predict O2 behavior in crystalline rocks. PMID:17935829

  17. How do changes in dissolved oxygen concentration influence microbially-controlled phosphorus cycling in stream biofilms?

    NASA Astrophysics Data System (ADS)

    Saia, S. M.; Locke, N. A.; Regan, J. M.; Carrick, H. J.; Buda, A. R.; Walter, M. T.

    2014-12-01

    Advances in molecular microbiology techniques (e.g. epi-fluorescent microscopy and PCR) are making it easier to study the influence of specific microorganisms on nutrient transport. Polyphosphate accumulating organisms (PAOs) are commonly used in wastewater treatment plants to remove excess phosphorus (P) from effluent water. PAOs have also been identified in natural settings but their ecological function is not well known. In this study, we tested the hypothesis that PAOs in natural environments would release and accumulate P during anaerobic and aerobic conditions, respectively. We placed stream biofilms in sealed, covered tubs and subjected them to alternating air (aerobic conditions) and N2 gas (anaerobic condition) bubbling for 12 hours each. Four treatments investigated the influence of changing dissolved oxygen on micribially-controlled P cycling: (1) biofilms bubbled continuously with air, (2) biofilms bubbled alternatively with air and N2, (3) biocide treated biofilms bubbled continuously with air, and (4) biocide treated biofilms bubbled alternatively with air and N2. Treatments 3 and 4 serve as abiotic controls to treatments 1 and 2. We analyzed samples every 12 hours for soluble reactive P (SRP), temperature, dissolved oxygen, and pH. We also used fluorescent microscopy (i.e. DAPI staining) and PCR to verify the presence of PAOs in the stream biofilms. SRP results over the course of the experiment support our hypothesis that anaerobic and aerobic stream conditions may impact PAO mediated P release and uptake, respectively in natural environments. The results of these experiments draw attention to the importance of microbiological controls on P mobility in freshwater ecosystems.

  18. Identification of key parameters controlling dissolved oxygen migration and attenuation in fractured crystalline rocks.

    PubMed

    Spiessl, S M; MacQuarrie, K T B; Mayer, K U

    2008-01-28

    In the crystalline rocks of the Canadian Shield, geochemical conditions are currently reducing at depths of 500-1000 m. However, during future glacial periods, altered hydrologic conditions could potentially result in enhanced recharge of glacial melt water containing a relatively high concentration of dissolved oxygen (O2). It is therefore of interest to investigate the physical and geochemical processes, including naturally-occurring redox reactions, that may control O2 ingress. In this study, the reactive transport code MIN3P is used in combination with 2k factorial analyses to identify the most important parameters controlling oxygen migration and attenuation in fractured crystalline rocks. Scenarios considered are based on simplified conceptual models that include a single vertical fracture, or a fracture zone, contained within a rock matrix that extends from the ground surface to a depth of 500 m. Consistent with field observations, Fe(II)-bearing minerals are present in the fractures (i.e. chlorite) and the rock matrix (biotite and small quantities of pyrite). For the parameter ranges investigated, results indicate that for the single fracture case, the most influential factors controlling dissolved O2 ingress are flow velocity in the fracture, fracture aperture, and the biotite reaction rate in the rock matrix. The most important parameters for the fracture zone simulations are flow velocity in the individual fractures, pO2 in the recharge water, biotite reaction rate, and to a lesser degree the abundance and reactivity of chlorite in the fracture zone, and the fracture zone width. These parameters should therefore receive increased consideration during site characterization, and in the formulation of site-specific models intended to predict O2 behavior in crystalline rocks.

  19. Controlled temperature expansion in oxygen production by molten alkali metal salts

    DOEpatents

    Erickson, Donald C.

    1985-06-04

    A continuous process is set forth for the production of oxygen from an oxygen containing gas stream, such as air, by contacting a feed gas stream with a molten solution of an oxygen acceptor to oxidize the acceptor and cyclically regenerating the oxidized acceptor by releasing oxygen from the acceptor wherein the oxygen-depleted gas stream from the contact zone is treated sequentially to temperature reduction by heat exchange against the feed stream so as to condense out entrained oxygen acceptor for recycle to the process, combustion of the gas stream with fuel to elevate its temperature and expansion of the combusted high temperature gas stream in a turbine to recover power.

  20. Oxygen analyzer

    DOEpatents

    Benner, W.H.

    1984-05-08

    An oxygen analyzer which identifies and classifies microgram quantities of oxygen in ambient particulate matter and for quantitating organic oxygen in solvent extracts of ambient particulate matter. A sample is pyrolyzed in oxygen-free nitrogen gas (N/sub 2/), and the resulting oxygen quantitatively converted to carbon monoxide (CO) by contact with hot granular carbon (C). Two analysis modes are made possible: (1) rapid determination of total pyrolyzable obtained by decomposing the sample at 1135/sup 0/C, or (2) temperature-programmed oxygen thermal analysis obtained by heating the sample from room temperature to 1135/sup 0/C as a function of time. The analyzer basically comprises a pyrolysis tube containing a bed of granular carbon under N/sub 2/, ovens used to heat the carbon and/or decompose the sample, and a non-dispersive infrared CO detector coupled to a mini-computer to quantitate oxygen in the decomposition products and control oven heating.

  1. Terminal repeat retrotransposon in miniature (TRIM) as DNA markers in Brassica relatives.

    PubMed

    Kwon, Soo-Jin; Kim, Dong-Hyun; Lim, Myung-Ho; Long, Yan; Meng, Jin-Ling; Lim, Ki-Byung; Kim, Jin-A; Kim, Jung Sun; Jin, Mina; Kim, Ho-Il; Ahn, Sang-Nag; Wessler, Susan R; Yang, Tae-Jin; Park, Beom-Seok

    2007-10-01

    We have developed a display system using a unique sequence of terminal repeat retrotransposon in miniature (TRIM) elements, which were recently identified from gene-rich regions of Brassica rapa. The technique, named TRIM display, is based on modification of the AFLP technique using an adapter primer for the restriction fragments of BfaI and a primer derived from conserved terminal repeat sequences of TRIM elements, Br1 and Br2. TRIM display using genomic DNA produced 50-70 bands ranging from 100 to 700 bp in all the species of the family Brassicaceae. TRIM display using B. rapa cDNA produced about 20 bands. Sequences of 11 randomly selected bands, 7 from genomic DNA and 4 from cDNA, begin with about 104 bp of the terminal repeat sequences of TRIM elements Br1 or Br2 and end with unique sequences indicating that all bands are derived from unique insertion sites of TRIM elements. Furthermore, 7 of the 11 unique sequences showed significant similarity with expressed gene. Most of the TRIM display bands were polymorphic between genera and about 55% (132 of 239 bands) are polymorphic among 19 commercial F1 hybrid cultivars. Analysis of phylogenetic relationships shows clear-cut lineage among the 19 cultivars. Furthermore, a combination of 11 polymorphic bands derived from only one primer combination can clearly distinguish one cultivar from the others. TRIM display bands were reproducible and inheritable through successive generations that is revealed by genetic mapping of 6 out of 27 polymorphic TRIM markers on the genetic map of Brassica napus. Collective data provide evidence that TRIM display can provide useful DNA markers in Brassica relatives because these markers are distributed in gene-rich regions, and are sometimes involved in the restructuring of genes.

  2. Aberrant methylation of TRIM58 in hepatocellular carcinoma and its potential clinical implication.

    PubMed

    Qiu, Xueping; Huang, Yifang; Zhou, Ye; Zheng, Fang

    2016-08-01

    TRIM58 (tripartite motif containing 58) has been reported as a novel methylated gene in hepatocellular carcinoma (HCC) by methylation microarrays. However, its associations with mRNA expression and clinicopathological characteristics have not been evaluated. In this study, we explored the potential clinical implications of TRIM58 methylation in HCC. We analyzed the methylation level of TRIM58 in 181 HCC tissues, 172 matched adjacent non-tumor tissues and 13 normal liver tissues using methylation-sensitive restriction enzyme based quantitative PCR and bisulfite genomic sequencing. Further, the mRNA expression level of TRIM58 was measured in 46 paired HCC and adjacent non-tumor tissues by quantitative real-time PCR. Moreover, the relationship between TRIM58 methylation and mRNA expression, the clinicopathological features, as well as prognostic value were evaluated. The results showed that TRIM58 methylation was significantly higher in HCC tissues compared with adjacent non-tumor tissues and normal liver tissues (both p<0.0001). Using 10% as the cut-off value, hypermethylation of TRIM58 was specific in HCC tissues (28.18%, 51/181), with a tendency to correlate with unfavorable disease-free survival (p=0.047). Moreover, TRIM58 expression was significantly decreased in HCC tissues compared with adjacent non-tumor tissues (p<0.0001), and showed a negative association with DNA methylation (p=0.015, rs= -0.260). Our data indicate that TRIM58 methylation is a common event in HCC and may contribute to downregulation of its mRNA expression. Furthermore, hypermethylation of TRIM58 tends to be associated with worse DFS after hepatectomy. However, the potential clinical application of TRIM58 need to be further investigated. PMID:27373520

  3. Closed-loop identification and control application for dissolved oxygen concentration in a full-scale coke wastewater treatment plant.

    PubMed

    Yoo, C K; Cho, J H; Kwak, H J; Choi, S K; Chun, H D; Lee, I

    2001-01-01

    The objective of this paper is to apply a closed-loop identification to actual dissolved oxygen control system in the coke wastewater treatment plant. It approximates the dissolved oxygen dynamics to a high order model using the integral transform method and reduces it to the first-order plus time delay (FOPTD) or second-order plus time delay (SOPTD) for the PID controller tuning. To experiment the process identification on the real plant, a simple set-point change of the speed of surface aerator under the closed-loop control without any mode change was used as an activation signal of the identification. The full-scale experimental results show a good identification performance and a good tracking ability for set-point change. As a result of improved control performance, the fluctuation of dissolved oxygen concentration variation has been decreased and the electric power saving has been accomplished.

  4. Closed-loop identification and control application for dissolved oxygen concentration in a full-scale coke wastewater treatment plant.

    PubMed

    Yoo, C K; Cho, J H; Kwak, H J; Choi, S K; Chun, H D; Lee, I

    2001-01-01

    The objective of this paper is to apply a closed-loop identification to actual dissolved oxygen control system in the coke wastewater treatment plant. It approximates the dissolved oxygen dynamics to a high order model using the integral transform method and reduces it to the first-order plus time delay (FOPTD) or second-order plus time delay (SOPTD) for the PID controller tuning. To experiment the process identification on the real plant, a simple set-point change of the speed of surface aerator under the closed-loop control without any mode change was used as an activation signal of the identification. The full-scale experimental results show a good identification performance and a good tracking ability for set-point change. As a result of improved control performance, the fluctuation of dissolved oxygen concentration variation has been decreased and the electric power saving has been accomplished. PMID:11385849

  5. PHYSICAL AND BIOLOGICAL CONTROLS ON DISSOLVED OXYGEN DYNAMICS IN PENSACOLA BAY, FL

    EPA Science Inventory

    Nutrient enrichment of estuaries and coastal waters can contribute to hypoxia (low dissolved oxygen) by increasing primary production and biological oxygen demand. Other factors, however, contribute to hypoxia and affect the susceptibility of coastal waters to hypoxia. Hypoxia fo...

  6. Orbital atomic oxygen effects on thermal control and optical materials - STS-8 results

    NASA Technical Reports Server (NTRS)

    Whitaker, A. F.; Little, S. A.; Harwell, R. J.; Griner, D. B.; Dehaye, R. F.; Fromhold, A. T., Jr.

    1985-01-01

    The effects of exposing 23 specimens of optical and thermal control materials to space at 120 km altitude for over 40 hrs during the STS-8 mission are discussed. Ten samples of paint targeted for the Space Telescope (ST) and the Tethered Satellite were exposed, and included polyurethane, oxide, silicone, and glossy black and white samples which were scanned for alterations in the optical properties after being retrieved. Nine mirror-type materials were also investigated, along with silver specimens typical of solar cell interconnects. The oxygen flow at the orbital altitude was 3.5 x 10 to the 20th atoms/cu cm. The exposures caused no degradation of the magnesium fluoride mirror coatings, while the Kapton coating for the ST solar cell panels showed evidence of losing thickness. The Ag solar cell contacts will require coatings to extend their lifetimes. Overcoatings were also proven necessary for inhibiting degradation of painted surfaces.

  7. Changes in controlling factors of dissolved oxygen in the Eastern Equatorial Pacific from the past to the future

    NASA Astrophysics Data System (ADS)

    Shigemitsu, M.; Yamamoto, A.; Oka, A.; Yamanaka, Y.

    2014-12-01

    Variability of the volume of oceanic oxygen-deficient waters is critical for aerobic organisms. Several climate models consistently predict the decreasing oceanic oxygen inventory from the second half of the 20th to the 21st centuries. However, the projections about how the volume of oxygen-deficient waters in the future are not consistent with each other. In this study, we investigated the factors controlling the variability of volumes of oxygen-deficient waters in the Eastern Equatorial Pacific (EEP) where the largest oxygen-deficient zone exists in the ocean. Hindcast (from years 1850 to 2005) and forecast (from years 2006 to 2100) experiments with an offline global ocean biogeochemical model were performed by using outputs of physical field by the Earth System Model, MIROC-ESM, under the RCP4.5 and 8.5 scenarios. The model results illustrated that the volume of oxygen-deficient waters in EEP remains relatively constant from years 1850 to 1950, rapidly increases from years 1950 to 2000, and gradually declines from years 2000 to 2100. Available observations are consistent with the change of oxygen concentration from years 1950 to 2000. The budget analysis in EEP shows the following: (1) During 1850 to 1950, the horizontal advection via the Equatorial Undercurrent (EUC) is the major source of dissolved oxygen to the oxygen-deficient waters in EEP and that is almost consumed by the regeneration of organic matter. (2) During 1950 to 2000, the horizontal advection decreases and the declilne is not compensated by the reduction of regeneration of organic matter, which results in the expanding volume of oxygen-deficient waters. (3) In the 21st century, the horizontal advection declines further but the decrease in the regeneration of organic matter and increase in vertical advective supply are in excess of the decrease, leading to the shrink of oxygen-deficient water volume. Our model suggests that the key mechanisms controlling the oxygen-deficient water volume in EEP

  8. Oxygen Profile. Operational Control Tests for Wastewater Treatment Facilities. Instructor's Manual [and] Student Workbook.

    ERIC Educational Resources Information Center

    Wooley, John F.

    The oxygen profile procedure is a means of measuring the oxygen concentration at various locations in a basin. By dividing the surface of a basin into sections and then establishing sample points on the surface, at mid-depth, and near the bottom, a waste water treatment plant operator can measure and plot dissolved oxygen data which can be plotted…

  9. Hyperbaric oxygen therapy as salvage treatment for sudden sensorineural hearing loss: a prospective controlled study.

    PubMed

    Pezzoli, M; Magnano, M; Maffi, L; Pezzoli, L; Marcato, P; Orione, M; Cupi, D; Bongioannini, G

    2015-07-01

    The most commonly used treatment for sensorineural sudden hearing loss (SSHL) in clinical practice is the administration of steroids; however, a favorable result is not always obtained. We studied 58 patients who failed to recover after primary treatment with IV steroids, 44 of these met our inclusion criteria (mean age 50.7, 27 males, range 30-74). We treated 23 patients (mean age 47.3, 16 males, age range 22-74) with hyperbaric oxygen therapy (HBO) (2.5 ATA for 60 min for 15 treatments), while 21 (mean age 54.5, 11 males, age range 22-71) patients refused to be treated and served as a non-randomized control group. Patients treated with HBO had a mean improvement of 15.6 dB (SD ± 15.3), with 1 of them completely healed, 5 with a good recovery, 10 with a fair recovery and 7 unchanged. Patients who were not treated had a spontaneous mean improvement of 5.0 dB (SD ± 11.4) with 3 patients with a good recovery, 1 patient with a fair recovery and 17 patients unchanged. Mean improvement was significantly better in patients treated with HBO compared to controls (p = 0.0133). Patients with worst hearing had the greater degree of improvement whether or not they were treated in the first 10 days after the onset of the hearing loss or between 11 and 30 days. In conclusion, hyperbaric oxygen therapy can lead to significant improvement of pure tone hearing thresholds in patients with SSHL who failed primary corticosteroid treatment and are within 4 weeks of the onset of deafness.

  10. Quasi-Linear Parameter Varying Representation of General Aircraft Dynamics Over Non-Trim Region

    NASA Technical Reports Server (NTRS)

    Shin, Jong-Yeob

    2007-01-01

    For applying linear parameter varying (LPV) control synthesis and analysis to a nonlinear system, it is required that a nonlinear system be represented in the form of an LPV model. In this paper, a new representation method is developed to construct an LPV model from a nonlinear mathematical model without the restriction that an operating point must be in the neighborhood of equilibrium points. An LPV model constructed by the new method preserves local stabilities of the original nonlinear system at "frozen" scheduling parameters and also represents the original nonlinear dynamics of a system over a non-trim region. An LPV model of the motion of FASER (Free-flying Aircraft for Subscale Experimental Research) is constructed by the new method.

  11. Controlled intracellular generation of reactive oxygen species in human mesenchymal stem cells using porphyrin conjugated nanoparticles.

    PubMed

    Lavado, Andrea S; Chauhan, Veeren M; Zen, Amer Alhaj; Giuntini, Francesca; Jones, D Rhodri E; Boyle, Ross W; Beeby, Andrew; Chan, Weng C; Aylott, Jonathan W

    2015-09-14

    Nanoparticles capable of generating controlled amounts of intracellular reactive oxygen species (ROS), that advance the study of oxidative stress and cellular communication, were synthesized by functionalizing polyacrylamide nanoparticles with zinc(II) porphyrin photosensitisers. Controlled ROS production was demonstrated in human mesenchymal stem cells (hMSCs) through (1) production of nanoparticles functionalized with varying percentages of Zn(II) porphyrin and (2) modulating the number of doses of excitation light to internalized nanoparticles. hMSCs challenged with nanoparticles functionalized with increasing percentages of Zn(II) porphyrin and high numbers of irradiations of excitation light were found to generate greater amounts of ROS. A novel dye, which is transformed into fluorescent 7-hydroxy-4-trifluoromethyl-coumarin in the presence of hydrogen peroxide, provided an indirect indicator for cumulative ROS production. The mitochondrial membrane potential was monitored to investigate the destructive effect of increased intracellular ROS production. Flow cytometric analysis of nanoparticle treated hMSCs suggested irradiation with excitation light signalled controlled apoptotic cell death, rather than uncontrolled necrotic cell death. Increased intracellular ROS production did not induce phenotypic changes in hMSC subcultures.

  12. Barley Seed Aging: Genetics behind the Dry Elevated Pressure of Oxygen Aging and Moist Controlled Deterioration

    PubMed Central

    Nagel, Manuela; Kodde, Jan; Pistrick, Sibylle; Mascher, Martin; Börner, Andreas; Groot, Steven P. C.

    2016-01-01

    Experimental seed aging approaches intend to mimic seed deterioration processes to achieve a storage interval reduction. Common methods apply higher seed moisture levels and temperatures. In contrast, the “elevated partial pressure of oxygen” (EPPO) approach treats dry seed stored at ambient temperatures with high oxygen pressure. To analyse the genetic background of seed longevity and the effects of seed aging under dry conditions, the EPPO approach was applied to the progeny of the Oregon Wolfe Barley (OWB) mapping population. In comparison to a non-treated control and a control high-pressure nitrogen treatment, EPPO stored seeds showed typical symptoms of aging with a significant reduction of normal seedlings, slower germination, and less total germination. Thereby, the parent Dom (“OWB-D”), carrying dominant alleles, is more sensitive to aging in comparison to the population mean and in most cases to the parent Rec (“OWB-R”), carrying recessive alleles. Quantitative trait locus (QTL) analyses using 2832 markers revealed 65 QTLs, including two major loci for seed vigor on 2H and 7H. QTLs for EPPO tolerance were detected on 3H, 4H, and 5H. An applied controlled deterioration (CD) treatment (aged at higher moisture level and temperature) revealed a tolerance QTL on 5H, indicating that the mechanism of seed deterioration differs in part between EPPO or CD conditions. PMID:27066038

  13. Oxygen safety

    MedlinePlus

    COPD - oxygen safety; Chronic obstructive pulmonary disease - oxygen safety; Chronic obstructive airways disease - oxygen safety; Emphysema - oxygen safety; Heart failure - oxygen-safety; Palliative care - oxygen safety; ...

  14. 46 CFR 116.422 - Ceilings, linings, trim, interior finish and decorations.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... 46 Shipping 4 2010-10-01 2010-10-01 false Ceilings, linings, trim, interior finish and decorations... PASSENGERS CONSTRUCTION AND ARRANGEMENT Fire Protection § 116.422 Ceilings, linings, trim, interior finish and decorations. (a) Ceilings, linings, and any furring incidental to their installation in...

  15. 46 CFR 116.422 - Ceilings, linings, trim, interior finish and decorations.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... 46 Shipping 4 2014-10-01 2014-10-01 false Ceilings, linings, trim, interior finish and decorations... PASSENGERS CONSTRUCTION AND ARRANGEMENT Fire Protection § 116.422 Ceilings, linings, trim, interior finish and decorations. (a) Ceilings, linings, and any furring incidental to their installation in...

  16. 46 CFR 116.422 - Ceilings, linings, trim, interior finish and decorations.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 46 Shipping 4 2013-10-01 2013-10-01 false Ceilings, linings, trim, interior finish and decorations... PASSENGERS CONSTRUCTION AND ARRANGEMENT Fire Protection § 116.422 Ceilings, linings, trim, interior finish and decorations. (a) Ceilings, linings, and any furring incidental to their installation in...

  17. 77 FR 60103 - Approval of Subzone Status; TST NA TRIM, LLC; Hidalgo, TX

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-10-02

    ... (77 FR 47816, 08/10/2012). The FTZ staff examiner reviewed the application and determined that it... Foreign-Trade Zones Board Approval of Subzone Status; TST NA TRIM, LLC; Hidalgo, TX On August 3, 2012, the... limit of FTZ 12, on behalf of TST NA TRIM, LLC, in Hidalgo, Texas. The application was processed...

  18. Primate TRIM5 proteins form hexagonal nets on HIV-1 capsids

    PubMed Central

    Li, Yen-Li; Chandrasekaran, Viswanathan; Carter, Stephen D; Woodward, Cora L; Christensen, Devin E; Dryden, Kelly A; Pornillos, Owen; Yeager, Mark; Ganser-Pornillos, Barbie K; Jensen, Grant J; Sundquist, Wesley I

    2016-01-01

    TRIM5 proteins are restriction factors that block retroviral infections by binding viral capsids and preventing reverse transcription. Capsid recognition is mediated by C-terminal domains on TRIM5α (SPRY) or TRIMCyp (cyclophilin A), which interact weakly with capsids. Efficient capsid recognition also requires the conserved N-terminal tripartite motifs (TRIM), which mediate oligomerization and create avidity effects. To characterize how TRIM5 proteins recognize viral capsids, we developed methods for isolating native recombinant TRIM5 proteins and purifying stable HIV-1 capsids. Biochemical and EM analyses revealed that TRIM5 proteins assembled into hexagonal nets, both alone and on capsid surfaces. These nets comprised open hexameric rings, with the SPRY domains centered on the edges and the B-box and RING domains at the vertices. Thus, the principles of hexagonal TRIM5 assembly and capsid pattern recognition are conserved across primates, allowing TRIM5 assemblies to maintain the conformational plasticity necessary to recognize divergent and pleomorphic retroviral capsids. DOI: http://dx.doi.org/10.7554/eLife.16269.001 PMID:27253068

  19. Object Trimming: When Masking Dots Alter Rather than Replace Target Representations

    ERIC Educational Resources Information Center

    Kahan, Todd A.; Enns, James T.

    2010-01-01

    Five experiments demonstrate that when dots appear beside a briefly presented target object, and persist on view longer than the target, the flanked object is perceptually altered by the dots. Three methods are used to explore this "object trimming effect". Experiments 1-3 assess participants' conscious reports of trimmed digits, Experiment 4 uses…

  20. HARD RED SPRING WHEAT / C-TRIM 20 BREAD: FORMULATION, PROCESSING AND TEXTURE ANALYSIS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    C-TRIM, a beta-glucan-rich fraction, was added to Hard Red Spring wheat (HRSW) flour in order to increase soluble fiber content of bread to a minimum of 0.75 g / bread serving, the minimum required for health claim as established by the FDA. Two blends FGT1 (flour, 25% gluten, and 17% C-TRIM) and F...

  1. 14 CFR 25.145 - Longitudinal control.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 14 Aeronautics and Space 1 2011-01-01 2011-01-01 false Longitudinal control. 25.145 Section 25.145... control. (a) It must be possible, at any point between the trim speed prescribed in § 25.103(b)(6) and..., no change in trim control, or exertion of more than 50 pounds control force (representative of...

  2. Realizing controllable graphene nucleation by regulating the competition of hydrogen and oxygen during chemical vapor deposition heating.

    PubMed

    Zhang, Haoran; Zhang, Yaqian; Zhang, Yanhui; Chen, Zhiying; Sui, Yanping; Ge, Xiaoming; Deng, Rongxuan; Yu, Guanghui; Jin, Zhi; Liu, Xinyu

    2016-08-24

    Oxygen can passivate Cu surface active sites when graphene nucleates. Thus, the nucleation density is decreased. The CuO/Cu substrate was chosen for graphene domain synthesis in our study. The results indicate that the CuO/Cu substrate is beneficial for large-scale, single-crystal graphene domain synthesis. Graphene grown on the CuO/Cu substrate exhibits fewer nucleation sites than on Cu foils, suggesting that graphene follows an oxygen-dominating growth. Hydrogen treatment via a heating process could weaken the surface oxygen's role in limiting graphene nucleation under the competition of hydrogen and oxygen and could transfer the synthesis of graphene into a hydrogen-dominating growth. However, the competition only exists during the chemical vapor deposition heating process. For non-hydrogen heated samples, oxygen-dominating growth is experienced even though the samples are annealed in hydrogen for a long time after the heating process. With the temperature increases, the role of hydrogen gradually decreases. The balance of hydrogen and oxygen is adjusted by introducing hydrogen gas at a different heating temperatures. The oxygen concentration on the substrate surface is believed to determine the reactions mechanisms based on the secondary ion mass spectrometry test results. This study provides a new method for the controllable synthesis of graphene nucleation during a heating process. PMID:27506467

  3. Brain oxygen tension controls the expansion of outer subventricular zone-like basal progenitors in the developing mouse brain.

    PubMed

    Wagenführ, Lisa; Meyer, Anne K; Braunschweig, Lena; Marrone, Lara; Storch, Alexander

    2015-09-01

    The mammalian neocortex shows a conserved six-layered structure that differs between species in the total number of cortical neurons produced owing to differences in the relative abundance of distinct progenitor populations. Recent studies have identified a new class of proliferative neurogenic cells in the outer subventricular zone (OSVZ) in gyrencephalic species such as primates and ferrets. Lissencephalic brains of mice possess fewer OSVZ-like progenitor cells and these do not constitute a distinct layer. Most in vitro and in vivo studies have shown that oxygen regulates the maintenance, proliferation and differentiation of neural progenitor cells. Here we dissect the effects of fetal brain oxygen tension on neural progenitor cell activity using a novel mouse model that allows oxygen tension to be controlled within the hypoxic microenvironment in the neurogenic niche of the fetal brain in vivo. Indeed, maternal oxygen treatment of 10%, 21% and 75% atmospheric oxygen tension for 48 h translates into robust changes in fetal brain oxygenation. Increased oxygen tension in fetal mouse forebrain in vivo leads to a marked expansion of a distinct proliferative cell population, basal to the SVZ. These cells constitute a novel neurogenic cell layer, similar to the OSVZ, and contribute to corticogenesis by heading for deeper cortical layers as a part of the cortical plate.

  4. Streptococcus mutans NADH Oxidase Lies at the Intersection of Overlapping Regulons Controlled by Oxygen and NAD+ Levels

    PubMed Central

    Baker, J. L.; Derr, A. M.; Karuppaiah, K.; MacGilvray, M. E.; Kajfasz, J. K.; Faustoferri, R. C.; Rivera-Ramos, I.; Bitoun, J. P.; Lemos, J. A.; Wen, Z. T.

    2014-01-01

    NADH oxidase (Nox, encoded by nox) is a flavin-containing enzyme used by the oral pathogen Streptococcus mutans to reduce diatomic oxygen to water while oxidizing NADH to NAD+. The critical nature of Nox is 2-fold: it serves to regenerate NAD+, a carbon cycle metabolite, and to reduce intracellular oxygen, preventing formation of destructive reactive oxygen species (ROS). As oxygen and NAD+ have been shown to modulate the activity of the global transcription factors Spx and Rex, respectively, Nox is potentially poised at a critical junction of two stress regulons. In this study, microarray data showed that either addition of oxygen or loss of nox resulted in altered expression of genes involved in energy metabolism and transport and the upregulation of genes encoding ROS-metabolizing enzymes. Loss of nox also resulted in upregulation of several genes encoding transcription factors and signaling molecules, including the redox-sensing regulator gene rex. Characterization of the nox promoter revealed that nox was regulated by oxygen, through SpxA, and by Rex. These data suggest a regulatory loop in which the roles of nox in reduction of oxygen and regeneration of NAD+ affect the activity levels of Spx and Rex, respectively, and their regulons, which control several genes, including nox, crucial to growth of S. mutans under conditions of oxidative stress. PMID:24682329

  5. Controlled experimental aquarium system for multi-stressor investigation: carbonate chemistry, oxygen saturation, and temperature

    NASA Astrophysics Data System (ADS)

    Bockmon, E. E.; Frieder, C. A.; Navarro, M. O.; White-Kershek, L. A.; Dickson, A. G.

    2013-02-01

    As the field of ocean acidification has grown, researchers have increasingly turned to laboratory experiments to understand the impacts of increased CO2 on marine organisms. However, other changes such as ocean warming and deoxygenation are occurring concurrently with the increasing CO2 concentrations, complicating the anthropogenic impact on organisms. This experimental aquarium design allows for independent regulation of CO2 concentration, O2 levels, and temperature in a controlled environment to study the impacts of multiple stressors. The system has the flexibility for a wide range of treatment chemistry, seawater volumes, and study organisms. Control of the seawater chemistry is achieved by equilibration of a chosen gas mixture with seawater using a Liqui-Cel® membrane contactor. Included as examples, two experiments performed using the system have shown control of CO2 between approximately 500-1400 μatm and O2 from 80-240 μmol kg-1. Temperature has been maintained to 0.5 °C or better in the range of 10-17 °C. On a weeklong timescale, control results in variability in pH of less than 0.007 pH units and in oxygen concentration less than 3.5 μmol kg-1. Longer experiments, over a month, have been completed with reasonable but lessened control, still better than 0.08 pH units and 13 μmol kg-1 O2. The ability to study the impacts of multiple stressors in the laboratory simultaneously, as well as independently, will be an important part of understanding the response of marine organisms to a high-CO2 world.

  6. Growth control of oxygen stoichiometry in homoepitaxial SrTiO3 films by pulsed laser epitaxy in high vacuum

    DOE PAGESBeta

    Lee, Ho Nyung; Ambrose Seo, Sung S.; Choi, Woo Seok; Rouleau, Christopher M.

    2016-01-29

    In many transition metal oxides, oxygen stoichiometry is one of the most critical parameters that plays a key role in determining the structural, physical, optical, and electrochemical properties of the material. However, controlling the growth to obtain high quality single crystal films having the right oxygen stoichiometry, especially in a high vacuum environment, has been viewed as a challenge. In this work, we show that, through proper control of the plume kinetic energy, stoichiometric crystalline films can be synthesized without generating oxygen defects even in high vacuum. We use a model homoepitaxial system of SrTiO3 (STO) thin films on singlemore » crystal STO substrates. Physical property measurements indicate that oxygen vacancy generation in high vacuum is strongly influenced by the energetics of the laser plume, and it can be controlled by proper laser beam delivery. Thus, our finding not only provides essential insight into oxygen stoichiometry control in high vacuum for understanding the fundamental properties of STO-based thin films and heterostructures, but it expands the utility of pulsed laser epitaxy of other materials as well.₃« less

  7. Growth control of oxygen stoichiometry in homoepitaxial SrTiO3 films by pulsed laser epitaxy in high vacuum.

    PubMed

    Lee, Ho Nyung; Ambrose Seo, Sung S; Choi, Woo Seok; Rouleau, Christopher M

    2016-01-29

    In many transition metal oxides, oxygen stoichiometry is one of the most critical parameters that plays a key role in determining the structural, physical, optical, and electrochemical properties of the material. However, controlling the growth to obtain high quality single crystal films having the right oxygen stoichiometry, especially in a high vacuum environment, has been viewed as a challenge. In this work, we show that, through proper control of the plume kinetic energy, stoichiometric crystalline films can be synthesized without generating oxygen defects even in high vacuum. We use a model homoepitaxial system of SrTiO3 (STO) thin films on single crystal STO substrates. Physical property measurements indicate that oxygen vacancy generation in high vacuum is strongly influenced by the energetics of the laser plume, and it can be controlled by proper laser beam delivery. Therefore, our finding not only provides essential insight into oxygen stoichiometry control in high vacuum for understanding the fundamental properties of STO-based thin films and heterostructures, but expands the utility of pulsed laser epitaxy of other materials as well.

  8. Growth control of oxygen stoichiometry in homoepitaxial SrTiO3 films by pulsed laser epitaxy in high vacuum

    NASA Astrophysics Data System (ADS)

    Lee, Ho Nyung; Ambrose Seo, Sung S.; Choi, Woo Seok; Rouleau, Christopher M.

    2016-01-01

    In many transition metal oxides, oxygen stoichiometry is one of the most critical parameters that plays a key role in determining the structural, physical, optical, and electrochemical properties of the material. However, controlling the growth to obtain high quality single crystal films having the right oxygen stoichiometry, especially in a high vacuum environment, has been viewed as a challenge. In this work, we show that, through proper control of the plume kinetic energy, stoichiometric crystalline films can be synthesized without generating oxygen defects even in high vacuum. We use a model homoepitaxial system of SrTiO3 (STO) thin films on single crystal STO substrates. Physical property measurements indicate that oxygen vacancy generation in high vacuum is strongly influenced by the energetics of the laser plume, and it can be controlled by proper laser beam delivery. Therefore, our finding not only provides essential insight into oxygen stoichiometry control in high vacuum for understanding the fundamental properties of STO-based thin films and heterostructures, but expands the utility of pulsed laser epitaxy of other materials as well.

  9. Growth control of oxygen stoichiometry in homoepitaxial SrTiO3 films by pulsed laser epitaxy in high vacuum

    PubMed Central

    Lee, Ho Nyung; Ambrose Seo, Sung S.; Choi, Woo Seok; Rouleau, Christopher M.

    2016-01-01

    In many transition metal oxides, oxygen stoichiometry is one of the most critical parameters that plays a key role in determining the structural, physical, optical, and electrochemical properties of the material. However, controlling the growth to obtain high quality single crystal films having the right oxygen stoichiometry, especially in a high vacuum environment, has been viewed as a challenge. In this work, we show that, through proper control of the plume kinetic energy, stoichiometric crystalline films can be synthesized without generating oxygen defects even in high vacuum. We use a model homoepitaxial system of SrTiO3 (STO) thin films on single crystal STO substrates. Physical property measurements indicate that oxygen vacancy generation in high vacuum is strongly influenced by the energetics of the laser plume, and it can be controlled by proper laser beam delivery. Therefore, our finding not only provides essential insight into oxygen stoichiometry control in high vacuum for understanding the fundamental properties of STO-based thin films and heterostructures, but expands the utility of pulsed laser epitaxy of other materials as well. PMID:26823119

  10. The effects of different bill-trimming methods on the well-being of Pekin ducks.

    PubMed

    Gustafson, L A; Cheng, H-W; Garner, J P; Pajor, E A; Mench, J A

    2007-09-01

    Pekin ducks are often bill-trimmed to prevent feather pecking and cannibalism, but this practice has been criticized because of the resulting potential for acute and chronic pain. The goal of this experiment was to compare 2 different bill-trimming methods, hot blade trimming with cautery (TRIM) and cautery only (tip-searing; SEAR), on the behavior, bill morphology, and weight gain of Pekin ducks. Ducklings (n = 192, 96 per sex) were trimmed at the hatchery and assigned to 12 floor pens (3.66 x0.91 m) by treatment. Behavior was evaluated by scan sampling, and plumage condition was scored using a 0 to 3 scoring system. Thirty-six ducks were randomly euthanized at 3 and 6 wk of age, and their bills were collected for examination. Following fixation and decalcification, the bills were embedded in paraffin wax and sectioned longitudinally. Alternate sections were stained with hematoxylin and eosin and Masson's trichrome for the connective tissues, and with Bielschowsky's silver impregnation, Bodian's staining, and Holmes' staining for the nerve fibers. Trimmed ducks engaged in fewer bill-related behaviors and rested more than untrimmed ducks (NOTRIM) during the first 2 wk posttrim. Ducks in the SEAR and NOTRIM groups showed similar patterns of weight gain, but those in the TRIM group had a lower rate of gain than ducks in the SEAR group during the first week posttrim and had a lower rate of gain than those in the NOTRIM group for 2 wk posttrim. Feather scores of ducks in the NOTRIM group were significantly worse than those in the TRIM or SEAR group by 18 d, and scores continued to deteriorate at a greater rate than those of trimmed ducks throughout the study. Both trimming methods caused connective tissue proliferation in the bill stumps, but the TRIM method caused thicker scar tissue than the SEAR method. No neuromas were found with either trimming method, but there were more nerve fibers in bill stumps of the SEAR ducks than the TRIM ducks. These results suggest that

  11. Trim37-deficient mice recapitulate several features of the multi-organ disorder Mulibrey nanism

    PubMed Central

    Kettunen, Kaisa M.; Karikoski, Riitta; Hämäläinen, Riikka H.; Toivonen, Teija T.; Antonenkov, Vasily D.; Kulesskaya, Natalia; Voikar, Vootele; Hölttä-Vuori, Maarit; Ikonen, Elina; Sainio, Kirsi; Jalanko, Anu; Karlberg, Susann; Karlberg, Niklas; Lipsanen-Nyman, Marita; Toppari, Jorma; Jauhiainen, Matti; Hiltunen, J. Kalervo; Jalanko, Hannu; Lehesjoki, Anna-Elina

    2016-01-01

    ABSTRACT Mulibrey nanism (MUL) is a rare autosomal recessive multi-organ disorder characterized by severe prenatal-onset growth failure, infertility, cardiopathy, risk for tumors, fatty liver, and type 2 diabetes. MUL is caused by loss-of-function mutations in TRIM37, which encodes an E3 ubiquitin ligase belonging to the tripartite motif (TRIM) protein family and having both peroxisomal and nuclear localization. We describe a congenic Trim37 knock-out mouse (Trim37−/−) model for MUL. Trim37−/− mice were viable and had normal weight development until approximately 12 months of age, after which they started to manifest increasing problems in wellbeing and weight loss. Assessment of skeletal parameters with computer tomography revealed significantly smaller skull size, but no difference in the lengths of long bones in Trim37−/− mice as compared with wild-type. Both male and female Trim37−/− mice were infertile, the gonads showing germ cell aplasia, hilus and Leydig cell hyperplasia and accumulation of lipids in and around Leydig cells. Male Trim37−/− mice had elevated levels of follicle-stimulating and luteinizing hormones, but maintained normal levels of testosterone. Six-month-old Trim37−/− mice had elevated fasting blood glucose and low fasting serum insulin levels. At 1.5 years Trim37−/− mice showed non-compaction cardiomyopathy, hepatomegaly, fatty liver and various tumors. The amount and morphology of liver peroxisomes seemed normal in Trim37−/− mice. The most consistently seen phenotypes in Trim37−/− mice were infertility and the associated hormonal findings, whereas there was more variability in the other phenotypes observed. Trim37−/− mice recapitulate several features of the human MUL disease and thus provide a good model to study disease pathogenesis related to TRIM37 deficiency, including infertility, non-alcoholic fatty liver disease, cardiomyopathy and tumorigenesis. PMID:27044324

  12. Negative regulation of the innate antiviral immune response by TRIM62 from orange spotted grouper.

    PubMed

    Yang, Ying; Huang, Youhua; Yu, Yepin; Zhou, Sheng; Wang, Shaowen; Yang, Min; Qin, Qiwei; Huang, Xiaohong

    2016-10-01

    Increased reports uncovered that mammalian tripartite motif-containing 62 (TRIM62) exerts crucial roles in cancer and innate immune response. However, the roles of fish TRIM62 in antiviral immune response remained uncertain. In this study, a TRIM62 gene was cloned from orange spotted grouper (EcTRIM62) and its roles in grouper RNA virus infection was elucidated in vitro. EcTRIM62 shared 99% and 83% identity to bicolor damselfish (Stegastes partitus) and human (Homo sapiens), respectively. Sequence alignment indicated that EcTRIM62 contained three domains, including a RING-finger domain, a B-box domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM62 was predominantly detected in brain and liver, followed by heart, skin, spleen, fin, gill, intestine, and stomach. Subcellular localization analysis indicated that bright fluorescence spots were observed in the cytoplasm of EcTRIM62-transfected grouper spleen (GS) cells. During red-spotted grouper nervous necrosis (RGNNV) infection, overexpression of EcTRIM62 significantly enhanced the severity of CPE and increased viral gene transcriptions. Furthermore, the ectopic expression of EcTRIM62 significantly decreased the transcription level of interferon signaling molecules, including interferon regulatory factor 3 (IRF3), IRF7, interferon-stimulated gene 15 (ISG15), melanoma differentiation-associated protein 5 (MDA5), myxovirus resistance gene MXI, and MXII, suggesting that the negative regulation of interferon immune response by EcTRIM62 might directly contributed to its enhancing effect on RGNNV replication. Furthermore, our results also demonstrated that overexpression of EcTRIM62 was able to differently regulate the expression levels of pro-inflammation cytokines. In addition, we found the ectopic expression of EcTIRM62 negatively regulated MDA5-, but not mediator of IRF3 activation (MITA)-induced interferon immune response. Further studies showed that the deletion of RING domain and SPRY domain

  13. Negative regulation of the innate antiviral immune response by TRIM62 from orange spotted grouper.

    PubMed

    Yang, Ying; Huang, Youhua; Yu, Yepin; Zhou, Sheng; Wang, Shaowen; Yang, Min; Qin, Qiwei; Huang, Xiaohong

    2016-10-01

    Increased reports uncovered that mammalian tripartite motif-containing 62 (TRIM62) exerts crucial roles in cancer and innate immune response. However, the roles of fish TRIM62 in antiviral immune response remained uncertain. In this study, a TRIM62 gene was cloned from orange spotted grouper (EcTRIM62) and its roles in grouper RNA virus infection was elucidated in vitro. EcTRIM62 shared 99% and 83% identity to bicolor damselfish (Stegastes partitus) and human (Homo sapiens), respectively. Sequence alignment indicated that EcTRIM62 contained three domains, including a RING-finger domain, a B-box domain and a SPRY domain. In healthy grouper, the transcript of EcTRIM62 was predominantly detected in brain and liver, followed by heart, skin, spleen, fin, gill, intestine, and stomach. Subcellular localization analysis indicated that bright fluorescence spots were observed in the cytoplasm of EcTRIM62-transfected grouper spleen (GS) cells. During red-spotted grouper nervous necrosis (RGNNV) infection, overexpression of EcTRIM62 significantly enhanced the severity of CPE and increased viral gene transcriptions. Furthermore, the ectopic expression of EcTRIM62 significantly decreased the transcription level of interferon signaling molecules, including interferon regulatory factor 3 (IRF3), IRF7, interferon-stimulated gene 15 (ISG15), melanoma differentiation-associated protein 5 (MDA5), myxovirus resistance gene MXI, and MXII, suggesting that the negative regulation of interferon immune response by EcTRIM62 might directly contributed to its enhancing effect on RGNNV replication. Furthermore, our results also demonstrated that overexpression of EcTRIM62 was able to differently regulate the expression levels of pro-inflammation cytokines. In addition, we found the ectopic expression of EcTIRM62 negatively regulated MDA5-, but not mediator of IRF3 activation (MITA)-induced interferon immune response. Further studies showed that the deletion of RING domain and SPRY domain

  14. Fish TRIM8 exerts antiviral roles through regulation of the proinflammatory factors and interferon signaling.

    PubMed

    Huang, Youhua; Yu, Yepin; Yang, Ying; Yang, Min; Zhou, Linli; Huang, Xiaohong; Qin, Qiwei

    2016-07-01

    The tripartite motif (TRIM)-containing proteins usually exert important regulatory roles during multiple biological processes. TRIM8 has been demonstrated to be a RING domain-containing E3 ubiquitin ligase which plays critical roles in inflammation and cancer. In this study, a TRIM8 homolog from grouper, Epinephelus coioides (EcTRIM8) was cloned, and its effects on fish virus replication were investigated. The full-length EcTRIM8 cDNA encoded a polypeptide of 568 amino acids with 92% identity to TRIM8 homolog from large yellow croaker (Larimichthys crocea). Sequence alignment analysis indicated that EcTRIM8 contained conserved RING finger, B-box and coiled-coil domain. Expression patterns analysis showed that EcTRIM8 was predominant in kidney, gill, fin, liver, spleen and brain. After challenging with Singapore grouper iridovirus (SGIV) or polyinosin-polycytidylic acid (poly I:C), the EcTRIM8 transcript was significantly increased at the early stage of injection. Under fluorescence microscopy, we observed different distribution patterns of EcTRIM8 in grouper spleen (GS) cells, including punctate fluorescence evenly situated throughout the cytoplasm and bright aggregates. The ectopic expression of EcTRIM8 in vitro significantly inhibited the replication of SGIV and red spotted grouper nervous necrosis virus (RGNNV), evidenced by the obvious reduction in the severity of cytopathic effect (CPE) and the significant decrease in viral gene transcription and protein synthesis. Moreover, the transcription of the proinflammatory factors and interferon related immune factors were differently regulated by EcTRIM8 during SGIV or RGNNV infection. In addition, overexpression of EcTRIM8 significantly increased the transcription of interferon regulator factor 3 (IRF3) and IRF7, and enhanced IRF3 or IRF7 induced interferon-stimulated response element (ISRE) promoter activity. Together, our results firstly demonstrated that fish TRIM8 could exert antiviral function through the

  15. Molecular characterization of a CpTRIM35-like protein and its splice variants from whitespotted bamboo shark (Chiloscyllium plagiosum).

    PubMed

    Zhang, Xinshang; Zhao, Heng; Chen, Yeyu; Luo, Huiying; Yao, Bin

    2014-10-24

    The tripartite motif (TRIM) proteins play important roles in a broad range of biological processes, including apoptosis, cell proliferation and innate immunity response. In this study, a TRIM gene and its three splice variants were cloned from an elasmobranch fish-whitespotted bamboo shark (Chiloscyllium plagiosum Bennett). Phylogenetic analysis indicated that the gene was closely related to TRIM35 homologs, thus termed CpTRIM35-like. Deduced CpTRIM35 has a RBCC-PRY/SPRY structure typical of TRIM proteins, and its splice variants (CpTRIM35-1-3) have different truncations at the C-terminus. The gene products were constitutively expressed in adult sharks with the highest levels in spleen and kidney. The different subcellular locations, upregulation upon LPS and poly I:C stimulation, and significant E3 ubiquitin ligase activities suggested their different roles in immune responses as an E3 ubiquitin ligase. This is the first TRIM protein ever characterized in elasmobranch fish.

  16. Environmental controls of the seasonal variation in oxygen uptake in sulfidic tailings deposited in a permafrost-affected area

    NASA Astrophysics Data System (ADS)

    Elberling, Bo

    2001-01-01

    Oxygen consumption, sulfide oxidation, and acid mine drainage (AMD) of pyritic mine tailings were investigated at Nanisivik Mine, which is located in an area with continuous permafrost on Baffin Island in northern Canada. Tailings of varying age and water content have been deposited under alkaline conditions. One area consisting of tailings deposited on land in 1992 was selected for detailed measurements of in situ oxygen uptake rates at the tailing surface in the summers 1998 and 1999 and periodically during autumn and winter in 1998. Measurements included oxygen gas, water content, and temperature in profiles, as well as chemical analyses of pore solution and solids. Additional oxygen consumption rates were measured under controlled temperature conditions on columns filled with partly oxidized tailings. On the basis of temperature dependency of pyrite oxidation observed in the laboratory, an Arrhenius diffusion equation with soil temperature as input was used to simulate the observed temporal variation in oxygen uptake. Field data reveal that the ongoing sulfide oxidation of well-drained tailings primarily takes place in the upper 30 cm and that oxidation has resulted in a depletion of pyrite, carbonates, and metals from this reaction zone. The model provides a reasonable fit to the observed trend in oxygen consumption and documents that oxidation of sulfide minerals in tailings is not reduced to neglectable levels at O°C. The AMD generation rate has been quantified based on the changes in concentration of oxidation products in the pore water and oxidation rates based on in situ measurements of oxygen consumption. The two rate descriptions provide comparable estimates of seasonal AMD generation and provide detailed information on weather-related controls of AMD generation, i.e., ground temperature, freezing, water content, and snow cover. These environmental controls are crucial for the design of frozen cover schemes in permafrost regions, where the aim is to

  17. Edge Fracture Prediction ofTraditional and Advanced Trimming Processes for AA6111-T4 Sheets

    SciTech Connect

    Hu, Xiaohua; Choi, Kyoo Sil; Sun, Xin; Golovashchenko, Segey F.

    2014-02-15

    This work examines the traditional and advanced trimming of AA6111-T4 aluminum sheets with finite element simulations. The Rice-Tracy damage model is used for the simulation with damage parameters estimated from experimental observation of grain aspect ratio near the fracture surface of trimmed parts. Fine meshes at the shearing zone, adaptive meshing, and adaptive contact techniques are used to accurately capture the contact interactions between the sharp corner of the trimming tools and the blank to be trimmed. To the knowledge of the authors, these are the first trimming simulations that can predict the effects of shearing clearance on burr heights with quantitative accuracy for AA6111-T4 aluminum sheets. In addition, the models have also accurately reproduced the crack initiation site as well as burr and sliver formation mechanisms observed experimentally.

  18. Trimming Simulation of Forming Metal Sheets Isogeometric Models by Using NURBS Surfaces

    NASA Astrophysics Data System (ADS)

    Herrero-Adan, D.; Cardoso, Rui P. R.; Adetoro, O. B.

    2016-08-01

    Some metal sheets forming processes need trimming in a final stage for achieving the net- shape specification and for removing micro-cracks and irregularities. In numerical simulation, since the exact final edge location is a priori unknown in the original metal blanket, the trimming needs to be done once the forming is finished. During the forming internal stresses are generated inside the sheet. When trimming those stresses configuration is changed to achieve equilibrium as a consequence of the material removal. In this paper a novel method for simulating the trimming is presented. The part to trim is modelled using isogeometric analysis (IGA). The new surface generated is modelled with non-uniform rational B-splines (NURBS). Due to the IGA characteristics a total geometrical accuracy and an efficient residual stresses recalculation are accomplished.

  19. Periodic trim solutions with HP-version finite elements in time

    NASA Technical Reports Server (NTRS)

    1991-01-01

    Finite Element in Time has been proven to be a powerful alternative solving strategy for the rotor craft trim problem. Additionally, Finite Element Method in Time has been developed in various versions like time-marching framework, Galerkin framework, Rayleigh-Ritz framework, and mixed formulation. Recently, this method was applied to the rotorcraft trim problem to obtain linearized solutions. The rotorcraft trim problem consists of trying to find a period solution for period-coefficient, differential equations subject to side constraints where certain force and momentum balance equations are forced to be equal to zero. There are free (or trim) parameters that are chosen to meet these side constraints. This project aims at expanding the application, in terms of the rotorcraft trim problem, from a linearized solution to nonlinear solution.

  20. Controlled intracellular generation of reactive oxygen species in human mesenchymal stem cells using porphyrin conjugated nanoparticles

    NASA Astrophysics Data System (ADS)

    Lavado, Andrea S.; Chauhan, Veeren M.; Alhaj Zen, Amer; Giuntini, Francesca; Jones, D. Rhodri E.; Boyle, Ross W.; Beeby, Andrew; Chan, Weng C.; Aylott, Jonathan W.

    2015-08-01

    Nanoparticles capable of generating controlled amounts of intracellular reactive oxygen species (ROS), that advance the study of oxidative stress and cellular communication, were synthesized by functionalizing polyacrylamide nanoparticles with zinc(ii) porphyrin photosensitisers. Controlled ROS production was demonstrated in human mesenchymal stem cells (hMSCs) through (1) production of nanoparticles functionalized with varying percentages of Zn(ii) porphyrin and (2) modulating the number of doses of excitation light to internalized nanoparticles. hMSCs challenged with nanoparticles functionalized with increasing percentages of Zn(ii) porphyrin and high numbers of irradiations of excitation light were found to generate greater amounts of ROS. A novel dye, which is transformed into fluorescent 7-hydroxy-4-trifluoromethyl-coumarin in the presence of hydrogen peroxide, provided an indirect indicator for cumulative ROS production. The mitochondrial membrane potential was monitored to investigate the destructive effect of increased intracellular ROS production. Flow cytometric analysis of nanoparticle treated hMSCs suggested irradiation with excitation light signalled controlled apoptotic cell death, rather than uncontrolled necrotic cell death. Increased intracellular ROS production did not induce phenotypic changes in hMSC subcultures.Nanoparticles capable of generating controlled amounts of intracellular reactive oxygen species (ROS), that advance the study of oxidative stress and cellular communication, were synthesized by functionalizing polyacrylamide nanoparticles with zinc(ii) porphyrin photosensitisers. Controlled ROS production was demonstrated in human mesenchymal stem cells (hMSCs) through (1) production of nanoparticles functionalized with varying percentages of Zn(ii) porphyrin and (2) modulating the number of doses of excitation light to internalized nanoparticles. hMSCs challenged with nanoparticles functionalized with increasing percentages of Zn

  1. Mitochondrial stress controls the radiosensitivity of the oxygen effect: Implications for radiotherapy

    PubMed Central

    Richardson, Richard B.; Harper, Mary-Ellen

    2016-01-01

    It has been more than 60 years since the discovery of the oxygen effect that empirically demonstrates the direct association between cell radiosensitivity and oxygen tension, important parameters in radiotherapy. Yet the mechanisms underlying this principal tenet of radiobiology are poorly understood. Better understanding of the oxygen effect may explain difficulty in eliminating hypoxic tumor cells, a major cause of regrowth after therapy. Our analysis utilizes the Howard-Flanders and Alper formula, which describes the relationship of radiosensitivity with oxygen tension. Here, we assign and qualitatively assess the relative contributions of two important mechanisms. The first mechanism involves the emission of reactive oxygen species from the mitochondrial electron transport chain, which increases with oxygen tension. The second mechanism is related to an energy and repair deficit, which increases with hypoxia. Following a radiation exposure, the uncoupling of the oxidative phosphorylation system (proton leak) in mitochondria lowers the emission of reactive oxygen species which has implications for fractionated radiotherapy, particularly of hypoxic tumors. Our analysis shows that, in oxygenated tumor and normal cells, mitochondria, rather than the nucleus, are the primary loci of radiotherapy effects, especially for low linear energy transfer radiation. Therefore, the oxygen effect can be explained by radiation-induced effects in mitochondria that generate reactive oxygen species, which in turn indirectly target nuclear DNA. PMID:26894978

  2. Effects of maximal oxygen uptake test and prolonged cycle ergometer exercise on the quiet standing control.

    PubMed

    Mello, Roger Gomes Tavares; de Oliveira, Liliam Fernandes; Nadal, Jurandir

    2010-06-01

    This work aims at testing the influence of peripheral and central fatigue, after maximal oxygen uptake test (Test1) and prolonged (Test2) cycle ergometer exercises, respectively, on sway density curve (SDC) parameters of postural control. Sixteen healthy male subjects were submitted to stabilometric tests, before and after the exercises. The Test1 was started at 12.5W, with 12.5W/min increments and 50rpm cadence until exhaustion. From the respiratory gas exchange signals, the first ventilatory threshold was obtained by the v-slope method. After a minimum of 72h, the subjects performed the Test2 for 60min, at a power output corresponding to 70% of such threshold. Before and just after these exercises, a set of 10 stabilometric trials of 50s was performed, alternating the eyes open and closed conditions, intercalated by a 10s resting period. The resulting signals were used to obtain the SDC. The Test1 caused decrease of the mean of peaks duration in SDC (p<0.05), decreasing the stability level, with small changes in the rates of central nervous system (CNS) and muscular torque controls. Conversely, Test2 increased the mean of time intervals between peaks in SDC (p<0.05), thus decreasing the CNS commands rate with minor changes in the stability level. Visual privation had a greater effect on body sway than these exercises, which were applied to muscles that are not the main actuators in body sway control. Concluding, this study allowed discriminating the effects of exercise intensities on body sway control.

  3. Oxygen-enabled control of Dzyaloshinskii-Moriya Interaction in ultra-thin magnetic films

    PubMed Central

    Belabbes, Abderrezak; Bihlmayer, Gustav; Blügel, Stefan; Manchon, Aurélien

    2016-01-01

    The search for chiral magnetic textures in systems lacking spatial inversion symmetry has attracted a massive amount of interest in the recent years with the real space observation of novel exotic magnetic phases such as skyrmions lattices, but also domain walls and spin spirals with a defined chirality. The electrical control of these textures offers thrilling perspectives in terms of fast and robust ultrahigh density data manipulation. A powerful ingredient commonly used to stabilize chiral magnetic states is the so-called Dzyaloshinskii-Moriya interaction (DMI) arising from spin-orbit coupling in inversion asymmetric magnets. Such a large antisymmetric exchange has been obtained at interfaces between heavy metals and transition metal ferromagnets, resulting in spin spirals and nanoskyrmion lattices. Here, using relativistic first-principles calculations, we demonstrate that the magnitude and sign of DMI can be entirely controlled by tuning the oxygen coverage of the magnetic film, therefore enabling the smart design of chiral magnetism in ultra-thin films. We anticipate that these results extend to other electronegative ions and suggest the possibility of electrical tuning of exotic magnetic phases. PMID:27103448

  4. Attosecond Coherent Control of the Photo-Dissociation of Oxygen Molecules

    NASA Astrophysics Data System (ADS)

    Sturm, Felix; Ray, Dipanwita; Wright, Travis; Shivaram, Niranjan; Bocharova, Irina; Slaughter, Daniel; Ranitovic, Predrag; Belkacem, Ali; Weber, Thorsten

    2016-05-01

    Attosecond Coherent Control has emerged in recent years as a technique to manipulate the absorption and ionization in atoms as well as the dissociation of molecules on an attosecond time scale. Single attosecond pulses and attosecond pulse trains (APTs) can coherently excite multiple electronic states. The electronic and nuclear wave packets can then be coupled with a second pulse forming multiple interfering quantum pathways. We have built a high flux extreme ultraviolet (XUV) light source delivering APTs based on HHG that allows to selectively excite neutral and ion states in molecules. Our beamline provides spectral selectivity and attosecond interferometric control of the pulses. In the study presented here, we use APTs, generated by High Harmonic Generation in a high flux extreme ultraviolet light source, to ionize highly excited states of oxygen molecules. We identify the ionization/dissociation pathways revealing vibrational structure with ultra-high resolution ion 3D-momentum imaging spectroscopy. Furthermore, we introduce a delay between IR pulses and XUV/IR pulses to constructively or destructively interfere the ionization and dissociation pathways, thus, enabling the manipulation of both the O2+and the O+ ion yields with attosecond precision. Supported by DOE under Contract No. DE-AC02-05CH11231.

  5. Room temperature alcohol sensing by oxygen vacancy controlled TiO{sub 2} nanotube array

    SciTech Connect

    Hazra, A.; Dutta, K.; Bhowmik, B.; Bhattacharyya, P.; Chattopadhyay, P. P.

    2014-08-25

    Oxygen vacancy (OV) controlled TiO{sub 2} nanotubes, having diameters of 50–70 nm and lengths of 200–250 nm, were synthesized by electrochemical anodization in the mixed electrolyte comprising NH{sub 4}F and ethylene glycol with selective H{sub 2}O content. The structural evolution of TiO{sub 2} nanoforms has been studied by field emission scanning electron microscopy. Variation in the formation of OVs with the variation of the structure of TiO{sub 2} nanoforms has been evaluated by photoluminescence and X-ray photoelectron spectroscopy. The sensor characteristics were correlated to the variation of the amount of induced OVs in the nanotubes. The efficient room temperature sensing achieved by the control of OVs of TiO{sub 2} nanotube array has paved the way for developing fast responding alcohol sensor with corresponding response magnitude of 60.2%, 45.3%, and 36.5% towards methanol, ethanol, and 2-propanol, respectively.

  6. Raising and controlling study of dissolved oxygen concentration in closed-type aeration tank.

    PubMed

    Chen, C K; Lo, S L

    2005-07-01

    This study investigated the promotion and control of dissolved oxygen (DO) concentration of the closed-type aeration tank via practical experiments in the wastewater treatment system of a 5-star hotel in Taipei. As with limited and treasured space in Taiwan, before the completion of the sewer system construction in cities, to utilize the mat foundation under large buildings as the space of sewage treatment plant still has been one of the alternatives of those sewage treatments. However, aeration tanks constructed in the mat foundation of buildings have smaller effective water depth, which will cause a lower total transfer amount of DO. Controlling the total exhaust gas flow rate can increase the pressure on such closed-type aeration tanks. The DO concentration thus may increase according to Henry's Law. Furthermore, it may enable operators to adjust the DO concentration of the aeration tank more precisely and thus sustain optimal operating conditions in these treatment facilities. Practical experiments indicated that the DO concentration of aeration tank maintains an average of 3.8 mg l(-1), obtaining the optimum operating conditions. The efficiency of the biological treatment facilities in the mat foundation could be markedly improved. PMID:16080335

  7. Mixed venous oxygen saturation as a promising parameter for physiologic control of total artificial heart.

    PubMed

    Nakamura, M; Homma, A; Tatsumi, E; Uesho, K; Taenaka, Y; Masuzawa, T; Nakamura, T; Zhang, B; Kakuta, Y; Imada, K; Nakatani, T; Takano, H

    2000-01-01

    Mixed venous oxygen saturation (SvO2) has been proposed as one of the suitable parameters for physiologic control of a total artificial heart (TAH). To establish the practical application of SvO2, we investigated the response of cardiac output (CO) and SvO2 to step-loaded exercise. A normal calf was surgically equipped with an ultrasonic flowmeter probe and an oximetry catheter in the pulmonary artery to measure CO and SvO2, respectively. Three stage step treadmill exercise tests (1, 2, and 4 km/h) were performed three times. While CO increased from 8.9 L/min at preexercise level to 9.7, 10.2 and 11.4 L/min at 1, 2, and 4 km/h, respectively, SvO2 decreased from 59.6% to 56.8, 55.3, and 52.2%, respectively. There existed a linear correlation between the magnitude of changes in CO and SvO2. CO and SvO2 exhibited a similar course of change, expressing an inverted exponential curve. The time constant of SvO2 was from 19 to 35 seconds, whereas that of CO was from 21 to 39 seconds. We conclude that SvO2 changes in close association with CO during exercise and has good potential to be a parameter for physiologic control of a TAH, by reflecting the recipient's CO demand without conspicuous time delay.

  8. Controllable generation of reactive oxygen species by femtosecond-laser irradiation

    NASA Astrophysics Data System (ADS)

    Yan, Wei; He, Hao; Wang, Yintao; Wang, Yisen; Hu, Minglie; Wang, Chingyue

    2014-02-01

    Femtosecond lasers have been advancing Biophotonics research in the past two decades with multiphoton microscopy, microsurgery, and photodynamic therapy. Nevertheless, laser irradiation is identified to bring photodamage to cells via reactive oxygen species (ROS) generation with unclear mechanism. Meanwhile, currently in biological researches, there is no effective method to provide controllable ROS production precisely, which originally is leaked from mitochondria during respiration and plays a key role in a lot of important cellular processes and cellular signaling pathways. In this study, we show the process of how the tightly focused femtosecond-laser induces ROS generation solely in mitochondria at the very beginning and then release to cytosol if the stimulus is intense enough. At certain weak power levels, the laser pulses induce merely moderate Ca2+ release but this is necessary for the laser to generate ROS in mitochondria. Cellular original ROS are also involved with a small contribution. When the power is above a threshold, ROS are then released to cytosol, indicating photodamage overwhelming cellular repair ability. The mechanisms in those two cases are quite different. Those results clarify parts of the mechanism in laser-induced ROS generation. Hence, it is possible to further this optical scheme to provide controllable ROS generation for ROS-related biological researches including mitochondrial diseases and aging.

  9. Controllable generation of reactive oxygen species by femtosecond-laser irradiation

    SciTech Connect

    Yan, Wei; He, Hao Wang, Yintao; Wang, Yisen; Hu, Minglie; Wang, Chingyue

    2014-02-24

    Femtosecond lasers have been advancing Biophotonics research in the past two decades with multiphoton microscopy, microsurgery, and photodynamic therapy. Nevertheless, laser irradiation is identified to bring photodamage to cells via reactive oxygen species (ROS) generation with unclear mechanism. Meanwhile, currently in biological researches, there is no effective method to provide controllable ROS production precisely, which originally is leaked from mitochondria during respiration and plays a key role in a lot of important cellular processes and cellular signaling pathways. In this study, we show the process of how the tightly focused femtosecond-laser induces ROS generation solely in mitochondria at the very beginning and then release to cytosol if the stimulus is intense enough. At certain weak power levels, the laser pulses induce merely moderate Ca{sup 2+} release but this is necessary for the laser to generate ROS in mitochondria. Cellular original ROS are also involved with a small contribution. When the power is above a threshold, ROS are then released to cytosol, indicating photodamage overwhelming cellular repair ability. The mechanisms in those two cases are quite different. Those results clarify parts of the mechanism in laser-induced ROS generation. Hence, it is possible to further this optical scheme to provide controllable ROS generation for ROS-related biological researches including mitochondrial diseases and aging.

  10. Controlled temperature expansion in oxygen production by molten alkali metal salts

    DOEpatents

    Erickson, D.C.

    1985-06-04

    A continuous process is set forth for the production of oxygen from an oxygen containing gas stream, such as air, by contacting a feed gas stream with a molten solution of an oxygen acceptor to oxidize the acceptor and cyclically regenerating the oxidized acceptor by releasing oxygen from the acceptor wherein the oxygen-depleted gas stream from the contact zone is treated sequentially to temperature reduction by heat exchange against the feed stream so as to condense out entrained oxygen acceptor for recycle to the process, combustion of the gas stream with fuel to elevate its temperature and expansion of the combusted high temperature gas stream in a turbine to recover power. 1 fig.

  11. Relationship between Body Weight and Beak Characteristics in One-Day-Old White Leghorn Chicks: its implications for beak trimming

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Beak trimming is a routine practice used in laying hens to prevent feather pecking and cannibalism. The effects of beak trimming on bird well-being depend on multiple factors, including the length of beak that is trimmed and the quality of the procedure. The aim of this work was to determine if a ...

  12. A Comparison of the Long Term Effects of Infrared Beak Treatment and Hot Blade Beak Trimming in Laying Hens

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The poultry industry is under intense pressure from the public and animal welfare advocates to eliminate the practice of beak trimming due to the potential for acute and chronic pain in the trimmed birds. However, elimination of beak trimming may have severe implications for animal welfare, as peck...

  13. TRIM5α Degradation via Autophagy Is Not Required for Retroviral Restriction

    PubMed Central

    Imam, Sabrina; Talley, Sarah; Nelson, Rachel S.; Dharan, Adarsh; O'Connor, Christopher; Hope, Thomas J.

    2016-01-01

    ABSTRACT TRIM5α is an interferon-inducible retroviral restriction factor that prevents infection by inducing the abortive disassembly of capsid cores recognized by its C-terminal PRY/SPRY domain. The mechanism by which TRIM5α mediates the disassembly of viral cores is poorly understood. Previous studies demonstrated that proteasome inhibitors abrogate the ability of TRIM5α to induce premature core disassembly and prevent reverse transcription; however, viral infection is still inhibited, indicating that the proteasome is partially involved in the restriction process. Alternatively, we and others have observed that TRIM5α associates with proteins involved in autophagic degradation pathways, and one recent study found that autophagic degradation is required for the restriction of retroviruses by TRIM5α. Here, we show that TRIM5α is basally degraded via autophagy in the absence of restriction-sensitive virus. We observe that the autophagy markers LC3b and lysosome-associated membrane protein 2A (LAMP2A) localize to a subset of TRIM5α cytoplasmic bodies, and inhibition of lysosomal degradation with bafilomycin A1 increases this association. To test the requirement for macroautophagy in restriction, we examined the ability of TRIM5α to restrict retroviral infection in cells depleted of the autophagic mediators ATG5, Beclin1, and p62. In all cases, restriction of retroviruses by human TRIM5α, rhesus macaque TRIM5α, and owl monkey TRIM-Cyp remained potent in cells depleted of these autophagic effectors by small interfering RNA (siRNA) knockdown or clustered regularly interspaced short palindromic repeat (CRISPR)-Cas9 genome editing. Collectively, these results are consistent with observations that the turnover of TRIM5α proteins is sensitive to autophagy inhibition; however, the data presented here do not support observations that the inhibition of autophagy abrogates retroviral restriction by TRIM5 proteins. IMPORTANCE Restriction factors are a class of

  14. Trimming Surface Sugars Protects Histoplasma from Immune Attack.

    PubMed

    Brown, Gordon D

    2016-01-01

    Dectin-1 is an essential innate immune receptor that recognizes β-glucans in fungal cell walls. Its importance is underscored by the mechanisms that fungal pathogens have evolved to avoid detection by this receptor. One such pathogen is Histoplasma capsulatum, and in a recent article in mBio, Rappleye's group presented data showing that yeasts of this organism secrete a β-glucanase, Eng1, which acts to prune β-glucans that are exposed on the fungal cell surface [A. L. Garfoot et al., mBio 7(2):e01388-15, 2016, http://dx.doi.org/10.1128/mBio.01388-15]. The trimming of these sugars reduces immune recognition through Dectin-1 and subsequent inflammatory responses, enhancing the pathogenesis of H. capsulatum. PMID:27118584

  15. Effects of maximal oxygen uptake test and prolonged cycle ergometer exercise on sway density plot of postural control.

    PubMed

    Mello, Roger G T; Oliveira, Liliam F; Nadal, Jurandir

    2009-01-01

    This work aims at testing the influence of the maximal oxygen uptake test and prolonged cycle ergometer exercise on sway density plot (SDP) parameters of postural control. Sixteen healthy male subjects were submitted to stabilometric tests with eye open and closed, before and after two different exercises. The maximal oxygen uptake test caused decrease of the mean duration of peaks in SDP, decreasing the stability level, without modify the rates of central and muscular torque controls. Conversely, 60 min exercise increased the mean time interval between two consecutive peaks in SDP, thus decreasing the control rate but not changing the stability level. Visual privation had a greater effect on body sway than these exercises, which were applied to muscles that are not the main actuators in body sway control. Concluding, the changes in postural control are dependent on the intensity and duration of exercise.

  16. High resolution micro ultrasonic machining for trimming 3D microstructures

    NASA Astrophysics Data System (ADS)

    Viswanath, Anupam; Li, Tao; Gianchandani, Yogesh

    2014-06-01

    This paper reports on the evaluation of a high resolution micro ultrasonic machining (HR-µUSM) process suitable for post fabrication trimming of complex 3D microstructures made from fused silica. Unlike conventional USM, the HR-µUSM process aims for low machining rates, providing high resolution and high surface quality. The machining rate is reduced by keeping the micro-tool tip at a fixed distance from the workpiece and vibrating it at a small amplitude. The surface roughness is improved by an appropriate selection of abrasive particles. Fluidic modeling is performed to study interaction among the vibrating micro-tool tip, workpiece, and the slurry. Using 304 stainless steel (SS304) tool tips of 50 µm diameter, the machining performance of the HR-µUSM process is characterized on flat fused silica substrates. The depths and surface finish of machined features are evaluated as functions of slurry concentrations, separation between the micro-tool and workpiece, and machining time. Under the selected conditions, the HR-µUSM process achieves machining rates as low as 10 nm s-1 averaged over the first minute of machining of a flat virgin sample. This corresponds to a mass removal rate of ≈20 ng min-1. The average surface roughness, Sa, achieved is as low as 30 nm. Analytical and numerical modeling are used to explain the typical profile of the machined features as well as machining rates. The process is used to demonstrate trimming of hemispherical 3D shells made of fused silica.

  17. Effects of Contamination, UV Radiation, and Atomic Oxygen on ISS Thermal Control Materials

    NASA Technical Reports Server (NTRS)

    Visentine, Jim; Finckenor, Miria; Zwiener, Jim; Munafo, Paul (Technical Monitor)

    2001-01-01

    Thermal control surfaces on the International Space Station (ISS) have been tailored for optimum optical properties. The space environment, particularly contamination, ultraviolet (UV) radiation, and atomic oxygen (AO) may have a detrimental effect on these optical properties. These effects must be quantified for modeling and planning. Also of interest was the effect of porosity on the reaction to simulated space environment. Five materials were chosen for this study based on their use on ISS. The thermal control materials were Z-93 white coating, silverized Teflon, chromic acid anodized aluminum, sulfuric acid anodized aluminum, and 7075-T6 aluminum. Some of the samples were exposed to RTV 560 silicone; others were exposed to Tefzel offgassing products. Two samples of Z-93 were not exposed to contamination as clean "controls". VUV radiation was used to photo-fix the contaminant to the material surface, then the samples were exposed to AO. All samples were exposed to 1000 equivalent sun-hours (ESH) of vacuum ultraviolet radiation (VUV) at the AZ Technology facility and a minimum of 1.5 x 10(exp 20) atoms/sq cm of AO at Marshall Space Flight Center. Half of the samples were exposed to an additional 2000 ESH of VUV at Huntington Beach prior to sent to AZ Technology. Darkening of the Z-93 white coating was noted after VUV exposure. AO exposure did bleach the Z-93 but not back to its original brightness. Solar absorptance curves show the degradation due to contamination and VUV and the recovery with AO exposure. More bleaching was noted on the Tefzel-contaminated samples than with the RTV-contaminated samples.

  18. StreamingTrim 1.0: a Java software for dynamic trimming of 16S rRNA sequence data from metagenetic studies.

    PubMed

    Bacci, G; Bazzicalupo, M; Benedetti, A; Mengoni, A

    2014-03-01

    Next-generation sequencing technologies are extensively used in the field of molecular microbial ecology to describe taxonomic composition and to infer functionality of microbial communities. In particular, the so-called barcode or metagenetic applications that are based on PCR amplicon library sequencing are very popular at present. One of the problems, related to the utilization of the data of these libraries, is the analysis of reads quality and removal (trimming) of low-quality segments, while retaining sufficient information for subsequent analyses (e.g. taxonomic assignment). Here, we present StreamingTrim, a DNA reads trimming software, written in Java, with which researchers are able to analyse the quality of DNA sequences in fastq files and to search for low-quality zones in a very conservative way. This software has been developed with the aim to provide a tool capable of trimming amplicon library data, retaining as much as taxonomic information as possible. This software is equipped with a graphical user interface for a user-friendly usage. Moreover, from a computational point of view, StreamingTrim reads and analyses sequences one by one from an input fastq file, without keeping anything in memory, permitting to run the computation on a normal desktop PC or even a laptop. Trimmed sequences are saved in an output file, and a statistics summary is displayed that contains the mean and standard deviation of the length and quality of the whole sequence file. Compiled software, a manual and example data sets are available under the BSD-2-Clause License at the GitHub repository at https://github.com/GiBacci/StreamingTrim/.

  19. TRIM26 functions as a novel tumor suppressor of hepatocellular carcinoma and its downregulation contributes to worse prognosis

    SciTech Connect

    Wang, Yi; He, Du; Yang, Liang; Wen, Bo; Dai, Jinfen; Zhang, Qian; Kang, Jian; He, Weiyang; Ding, Qianshan; He, De

    2015-07-31

    Hepatocellular carcinoma (HCC) is the one of the most common malignancies worldwide and its prognosis is extremely poor. Tripartite motif (TRIM) proteins play crucial roles in cancer cell biology but the function of tripartite motif 26 (TRIM26) has not been investigated. We demonstrated that low expression level of TRIM26 in tumor samples was significantly correlated with worse prognosis in HCC patients. We also demonstrated its expression level was associated with several clinicopathologic features such as AFP level and T stage of HCC patients. Furthermore, we validated that TRIM26 was significantly downregulated in HCC tissue compared with normal liver tissue. To further clarify the functional role of TRIM26 in HCC, We confirmed that TRIM26 silencing can promote cancer cell proliferation, colony forming, migration and invasion in vitro with HCC cell lines HepG2 and Bel-7402. Then we utilized bioinformatic tool to predict gene influenced by TRIM26, showing TRIM26 could modulate gene sets about cancer cell metabolism. In conclusion, we proved that TRIM26 is a novel tumor suppressor modulating multiple metabolism-related pathways in HCC. To our best knowledge, this is the first study to investigate the function of TRIM26 in cancer biology. Our findings provide useful insight into the mechanism of HCC origin and progression. Moreover, TRIM26 may represent a novel therapeutic target for HCC. - Highlights: • TRIM26 is down-regulated in liver cancer samples and functions as a novel tumor suppressor. • Down-regulation of TRIM26 is associated with worse prognosis of hepatocellular carcinoma (HCC). • Knockdown of TRIM26 promotes the proliferation and metastasis of HCC cells. • TRIM26 may function in abnormal metabolic progress of HCC.

  20. Oxygen Uptake. Operational Control Tests for Wastewater Treatment Facilities. Instructor's Manual [and] Student Workbook.

    ERIC Educational Resources Information Center

    Wooley, John F.

    Biological waste treatment in the activated sludge process is based on the ability of microorganisms to use dissolved oxygen in breaking down soluble organic substances. The oxygen uptake test is a means of measuring the respiration rate of microorganisms in this process. Designed for individuals who have completed National Pollutant Discharge…

  1. TRIM21 Ubiquitylates SQSTM1/p62 and Suppresses Protein Sequestration to Regulate Redox Homeostasis.

    PubMed

    Pan, Ji-An; Sun, Yu; Jiang, Ya-Ping; Bott, Alex J; Jaber, Nadia; Dou, Zhixun; Yang, Bin; Chen, Juei-Suei; Catanzaro, Joseph M; Du, Chunying; Ding, Wen-Xing; Diaz-Meco, Maria T; Moscat, Jorge; Ozato, Keiko; Lin, Richard Z; Zong, Wei-Xing

    2016-03-01

    TRIM21 is a RING finger domain-containing ubiquitin E3 ligase whose expression is elevated in autoimmune disease. While TRIM21 plays an important role in immune activation during pathogen infection, little is known about its inherent cellular function. Here we show that TRIM21 plays an essential role in redox regulation by directly interacting with SQSTM1/p62 and ubiquitylating p62 at lysine 7 (K7) via K63-linkage. As p62 oligomerizes and sequesters client proteins in inclusions, the TRIM21-mediated p62 ubiquitylation abrogates p62 oligomerization and sequestration of proteins including Keap1, a negative regulator of antioxidant response. TRIM21-deficient cells display an enhanced antioxidant response and reduced cell death in response to oxidative stress. Genetic ablation of TRIM21 in mice confers protection from oxidative damages caused by arsenic-induced liver insult and pressure overload heart injury. Therefore, TRIM21 plays an essential role in p62-regulated redox homeostasis and may be a viable target for treating pathological conditions resulting from oxidative damage. PMID:26942676

  2. Unique spectrum of activity of prosimian TRIM5alpha against exogenous and endogenous retroviruses.

    PubMed

    Rahm, Nadia; Yap, Melvyn; Snoeck, Joke; Zoete, Vincent; Muñoz, Miguel; Radespiel, Ute; Zimmermann, Elke; Michielin, Olivier; Stoye, Jonathan P; Ciuffi, Angela; Telenti, Amalio

    2011-05-01

    Lentiviruses, the genus of retrovirus that includes HIV-1, rarely endogenize. Some lemurs uniquely possess an endogenous lentivirus called PSIV ("prosimian immunodeficiency virus"). Thus, lemurs provide the opportunity to study the activity of host defense factors, such as TRIM5α, in the setting of germ line invasion. We characterized the activities of TRIM5α proteins from two distant lemurs against exogenous retroviruses and a chimeric PSIV. TRIM5α from gray mouse lemur, which carries PSIV in its genome, exhibited the narrowest restriction activity. One allelic variant of gray mouse lemur TRIM5α restricted only N-tropic murine leukemia virus (N-MLV), while a second variant restricted N-MLV and, uniquely, B-tropic MLV (B-MLV); both variants poorly blocked PSIV. In contrast, TRIM5α from ring-tailed lemur, which does not contain PSIV in its genome, revealed one of the broadest antiviral activities reported to date against lentiviruses, including PSIV. Investigation into the antiviral specificity of ring-tailed lemur TRIM5α demonstrated a major contribution of a 32-amino-acid expansion in variable region 2 (v2) of the B30.2/SPRY domain to the breadth of restriction. Data on lemur TRIM5α and the prediction of ancestral simian sequences hint at an evolutionary scenario where antiretroviral specificity is prominently defined by the lineage-specific expansion of the variable loops of B30.2/SPRY. PMID:21345948

  3. TRIM21 Ubiquitylates SQSTM1/p62 and Suppresses Protein Sequestration to Regulate Redox Homeostasis.

    PubMed

    Pan, Ji-An; Sun, Yu; Jiang, Ya-Ping; Bott, Alex J; Jaber, Nadia; Dou, Zhixun; Yang, Bin; Chen, Juei-Suei; Catanzaro, Joseph M; Du, Chunying; Ding, Wen-Xing; Diaz-Meco, Maria T; Moscat, Jorge; Ozato, Keiko; Lin, Richard Z; Zong, Wei-Xing

    2016-03-01

    TRIM21 is a RING finger domain-containing ubiquitin E3 ligase whose expression is elevated in autoimmune disease. While TRIM21 plays an important role in immune activation during pathogen infection, little is known about its inherent cellular function. Here we show that TRIM21 plays an essential role in redox regulation by directly interacting with SQSTM1/p62 and ubiquitylating p62 at lysine 7 (K7) via K63-linkage. As p62 oligomerizes and sequesters client proteins in inclusions, the TRIM21-mediated p62 ubiquitylation abrogates p62 oligomerization and sequestration of proteins including Keap1, a negative regulator of antioxidant response. TRIM21-deficient cells display an enhanced antioxidant response and reduced cell death in response to oxidative stress. Genetic ablation of TRIM21 in mice confers protection from oxidative damages caused by arsenic-induced liver insult and pressure overload heart injury. Therefore, TRIM21 plays an essential role in p62-regulated redox homeostasis and may be a viable target for treating pathological conditions resulting from oxidative damage.

  4. TRIM21 Immune Signaling Is More Sensitive to Antibody Affinity Than Its Neutralization Activity.

    PubMed

    Foss, Stian; Watkinson, Ruth E; Grevys, Algirdas; McAdam, Martin B; Bern, Malin; Høydahl, Lene Stokken; Dalhus, Bjørn; Michaelsen, Terje E; Sandlie, Inger; James, Leo C; Andersen, Jan Terje

    2016-04-15

    Ab-coated viruses can be detected in the cytosol by the FcR tripartite motif-containing 21 (TRIM21), which rapidly recruits the proteasomal machinery and triggers induction of immune signaling. As such, TRIM21 plays a key role in intracellular protection by targeting invading viruses for destruction and alerting the immune system. A hallmark of immunity is elicitation of a balanced response that is proportionate to the threat, to avoid unnecessary inflammation. In this article, we show how Ab affinity modulates TRIM21 immune function. We constructed a humanized monoclonal IgG1 against human adenovirus type 5 (AdV5) and a panel of Fc-engineered variants with a wide range of affinities for TRIM21. We found that IgG1-coated viral particles were neutralized via TRIM21, even when affinity was reduced by as much as 100-fold. In contrast, induction of NF-κB signaling was more sensitive to reduced affinity between TRIM21 and the Ab variants. Thus, TRIM21 mediates neutralization under suboptimal conditions, whereas induction of immune signaling is balanced according to the functional affinity for the incoming immune stimuli. Our findings have implications for engineering of antiviral IgG therapeutics with tailored effector functions. PMID:26962230

  5. Interplay between reactive oxygen species and hormones in the control of plant development and stress tolerance.

    PubMed

    Xia, Xiao-Jian; Zhou, Yan-Hong; Shi, Kai; Zhou, Jie; Foyer, Christine H; Yu, Jing-Quan

    2015-05-01

    As a consequence of a sessile lifestyle, plants are continuously exposed to changing environmental conditions and often life-threatening stresses caused by exposure to excessive light, extremes of temperature, limiting nutrient or water availability, and pathogen/insect attack. The flexible coordination of plant growth and development is necessary to optimize vigour and fitness in a changing environment through rapid and appropriate responses to such stresses. The concept that reactive oxygen species (ROS) are versatile signalling molecules in plants that contribute to stress acclimation is well established. This review provides an overview of our current knowledge of how ROS production and signalling are integrated with the action of auxin, brassinosteroids, gibberellins, abscisic acid, ethylene, strigolactones, salicylic acid, and jasmonic acid in the coordinate regulation of plant growth and stress tolerance. We consider the local and systemic crosstalk between ROS and hormonal signalling pathways and identify multiple points of reciprocal control, as well as providing insights into the integration nodes that involve Ca(2+)-dependent processes and mitogen-activated protein kinase phosphorylation cascades.

  6. Phase and composition controllable synthesis of cobalt manganese spinel nanoparticles towards efficient oxygen electrocatalysis.

    PubMed

    Li, Chun; Han, Xiaopeng; Cheng, Fangyi; Hu, Yuxiang; Chen, Chengcheng; Chen, Jun

    2015-06-04

    Spinel-type oxides are technologically important in many fields, including electronics, magnetism, catalysis and electrochemical energy storage and conversion. Typically, these materials are prepared by conventional ceramic routes that are energy consuming and offer limited control over shape and size. Moreover, for mixed-metal oxide spinels (for example, Co(x)Mn(3-x)O4), the crystallographic phase sensitively correlates with the metal ratio, posing great challenges to synthesize active product with simultaneously tuned phase and composition. Here we report a general synthesis of ultrasmall cobalt manganese spinels with tailored structural symmetry and composition through facile solution-based oxidation-precipitation and insertion-crystallization process at modest condition. As an example application, the nanocrystalline spinels catalyse the oxygen reduction/evolution reactions, showing phase and composition co-dependent performance. Furthermore, the mild synthetic strategy allows the formation of homogeneous and strongly coupled spinel/carbon nanocomposites, which exhibit comparable activity but superior durability to Pt/C and serve as efficient catalysts to build rechargeable Zn-air and Li-air batteries.

  7. Magnetically remote-controlled optical sensor spheres for monitoring oxygen or pH.

    PubMed

    Mistlberger, Günter; Koren, Klaus; Borisov, Sergey M; Klimant, Ingo

    2010-03-01

    Magnetic sensor macrospheres (MagSeMacs), i.e., stainless steel spheres coated with optical chemical sensors, are presented as an alternative to existing optical sensor patches and fiber-optical dip-probes. Such spheres can either be reversibly attached to the tip of an optical fiber (dip-probe) or trapped inside a vessel for read-out through the side wall. Moving the magnetic separator at the exterior enables measurements at varying positions with a single sensor. Moreover, the sensor's replacement is rapid and contactless. We measured dissolved oxygen or pH in stirred liquids, rotating flasks, and 24-well plates with a SensorDish-reader device for parallel cell culture monitoring. In these applications, MagSeMacs proved to be advantageous over conventional sensor patches and magnetic optical sensor particles because of their magnetism, spherical shape, reflectance, and size. These properties resulted in strong but reversible fixation, magnetic remote-controllability, short response times, high signal intensities, and simplified handling.

  8. Phase and composition controllable synthesis of cobalt manganese spinel nanoparticles towards efficient oxygen electrocatalysis

    PubMed Central

    Li, Chun; Han, Xiaopeng; Cheng, Fangyi; Hu, Yuxiang; Chen, Chengcheng; Chen, Jun

    2015-01-01

    Spinel-type oxides are technologically important in many fields, including electronics, magnetism, catalysis and electrochemical energy storage and conversion. Typically, these materials are prepared by conventional ceramic routes that are energy consuming and offer limited control over shape and size. Moreover, for mixed-metal oxide spinels (for example, CoxMn3−xO4), the crystallographic phase sensitively correlates with the metal ratio, posing great challenges to synthesize active product with simultaneously tuned phase and composition. Here we report a general synthesis of ultrasmall cobalt manganese spinels with tailored structural symmetry and composition through facile solution-based oxidation–precipitation and insertion–crystallization process at modest condition. As an example application, the nanocrystalline spinels catalyse the oxygen reduction/evolution reactions, showing phase and composition co-dependent performance. Furthermore, the mild synthetic strategy allows the formation of homogeneous and strongly coupled spinel/carbon nanocomposites, which exhibit comparable activity but superior durability to Pt/C and serve as efficient catalysts to build rechargeable Zn–air and Li–air batteries. PMID:26040417

  9. Phase and composition controllable synthesis of cobalt manganese spinel nanoparticles towards efficient oxygen electrocatalysis

    NASA Astrophysics Data System (ADS)

    Li, Chun; Han, Xiaopeng; Cheng, Fangyi; Hu, Yuxiang; Chen, Chengcheng; Chen, Jun

    2015-06-01

    Spinel-type oxides are technologically important in many fields, including electronics, magnetism, catalysis and electrochemical energy storage and conversion. Typically, these materials are prepared by conventional ceramic routes that are energy consuming and offer limited control over shape and size. Moreover, for mixed-metal oxide spinels (for example, CoxMn3-xO4), the crystallographic phase sensitively correlates with the metal ratio, posing great challenges to synthesize active product with simultaneously tuned phase and composition. Here we report a general synthesis of ultrasmall cobalt manganese spinels with tailored structural symmetry and composition through facile solution-based oxidation-precipitation and insertion-crystallization process at modest condition. As an example application, the nanocrystalline spinels catalyse the oxygen reduction/evolution reactions, showing phase and composition co-dependent performance. Furthermore, the mild synthetic strategy allows the formation of homogeneous and strongly coupled spinel/carbon nanocomposites, which exhibit comparable activity but superior durability to Pt/C and serve as efficient catalysts to build rechargeable Zn-air and Li-air batteries.

  10. Inside-Out Signaling Pathways from Nuclear Reactive Oxygen Species Control Pulmonary Innate Immunity.

    PubMed

    Choudhary, Sanjeev; Boldogh, Istvan; Brasier, Allan R

    2016-01-01

    The airway mucosa is responsible for mounting a robust innate immune response (IIR) upon encountering pathogen-associated molecular patterns. The IIR produces protective gene networks that stimulate neighboring epithelia and components of the immune system to trigger adaptive immunity. Little is currently known about how cellular reactive oxygen species (ROS) signaling is produced and cooperates in the IIR. We discuss recent discoveries about 2 nuclear ROS signaling pathways controlling innate immunity. Nuclear ROS oxidize guanine bases to produce mutagenic 8-oxoguanine, a lesion excised by 8-oxoguanine DNA glycosylase1/AP-lyase (OGG1). OGG1 forms a complex with the excised base, inducing its nuclear export. The cytoplasmic OGG1:8-oxoG complex functions as a guanine nucleotide exchange factor, triggering small GTPase signaling and activating phosphorylation of the nuclear factor (NF)x03BA;B/RelA transcription factor to induce immediate early gene expression. In parallel, nuclear ROS are detected by ataxia telangiectasia mutated (ATM), a PI3 kinase activated by ROS, triggering its nuclear export. ATM forms a scaffold with ribosomal S6 kinases, inducing RelA phosphorylation and resulting in transcription-coupled synthesis of type I and type III interferons and CC and CXC chemokines. We propose that ATM and OGG1 are endogenous nuclear ROS sensors that transmit nuclear signals that coordinate with outside-in pattern recognition receptor signaling, regulating the IIR. PMID:26756522

  11. The control of root growth by reactive oxygen species in Salix nigra Marsh. seedlings.

    PubMed

    Causin, Humberto F; Roqueiro, Gonzalo; Petrillo, Ezequiel; Láinez, Verónica; Pena, Liliana B; Marchetti, Cintia F; Gallego, Susana M; Maldonado, Sara I

    2012-02-01

    The production of reactive oxygen species (ROS) in specific regions of Salix seedlings roots seems essential for the normal growth of this organ. We examined the role of different ROS in the control of root development in Salix nigra seedlings, and explored possible mechanisms involved in the regulation of ROS generation and action. Root growth was not significantly affected by OH quenchers, while it was either partially or completely inhibited in the presence of H₂O₂ or O₂·⁻ scavengers, respectively. O₂·⁻ production was elevated in the root apex, particularly in the subapical meristem and protodermal zones. Apical O₂·⁻ generation activity was correlated to a high level of either Cu/Zn superoxide dismutase protein as well as carbonylated proteins. While NADPH-oxidase (NOX) was probably the main source of O₂·⁻ generation, the existence of other sources should not be discarded. O₂·⁻ production was also high in root hairs during budding, but it markedly decreased when the hair began to actively elongate. Root hair formation increased in the presence of H₂O₂ scavengers, and was suppressed when H₂O₂ or peroxidase inhibitors were supplied. The negative effect of H₂O₂ was partially counteracted by a MAPKK inhibitor. Possible mechanisms of action of the different ROS in comparison with other plant model systems are discussed.

  12. Neonatal Whisker Trimming Impairs Fear/Anxiety-Related Emotional Systems of the Amygdala and Social Behaviors in Adult Mice

    PubMed Central

    Soumiya, Hitomi; Godai, Ayumi; Araiso, Hiromi; Mori, Shingo; Furukawa, Shoei; Fukumitsu, Hidefumi

    2016-01-01

    Abnormalities in tactile perception, such as sensory defensiveness, are common features in autism spectrum disorder (ASD). While not a diagnostic criterion for ASD, deficits in tactile perception contribute to the observed lack of social communication skills. However, the influence of tactile perception deficits on the development of social behaviors remains uncertain, as do the effects on neuronal circuits related to the emotional regulation of social interactions. In neonatal rodents, whiskers are the most important tactile apparatus, so bilateral whisker trimming is used as a model of early tactile deprivation. To address the influence of tactile deprivation on adult behavior, we performed bilateral whisker trimming in mice for 10 days after birth (BWT10 mice) and examined social behaviors, tactile discrimination, and c-Fos expression, a marker of neural activation, in adults after full whisker regrowth. Adult BWT10 mice exhibited significantly shorter crossable distances in the gap-crossing test than age-matched controls, indicating persistent deficits in whisker-dependent tactile perception. In contrast to controls, BWT10 mice exhibited no preference for the social compartment containing a conspecific in the three-chamber test. Furthermore, the development of amygdala circuitry was severely affected in BWT10 mice. Based on the c-Fos expression pattern, hyperactivity was found in BWT10 amygdala circuits for processing fear/anxiety-related responses to height stress but not in circuits for processing reward stimuli during whisker-dependent cued learning. These results demonstrate that neonatal whisker trimming and concomitant whisker-dependent tactile discrimination impairment severely disturbs the development of amygdala-dependent emotional regulation. PMID:27362655

  13. TRIM11 negatively regulates IFNβ production and antiviral activity by targeting TBK1.

    PubMed

    Lee, Younglang; Song, Byeongwoon; Park, Chankyu; Kwon, Ki-Sun

    2013-01-01

    The innate immune response is a host defense mechanism against infection by viruses and bacteria. Type I interferons (IFNα/β) play a crucial role in innate immunity. If not tightly regulated under normal conditions and during immune responses, IFN production can become aberrant, leading to inflammatory and autoimmune diseases. In this study, we identified TRIM11 (tripartite motif containing 11) as a novel negative regulator of IFNβ production. Ectopic expression of TRIM11 decreased IFNβ promoter activity induced by poly (I:C) stimulation or overexpression of RIG-I (retinoic acid-inducible gene-I) signaling cascade components RIG-IN (constitutively active form of RIG-I), MAVS (mitochondrial antiviral signaling protein), or TBK1 (TANK-binding kinase-1). Conversely, TRIM11 knockdown enhanced IFNβ promoter activity induced by these stimuli. Moreover, TRIM11 overexpression inhibited the phosphorylation and dimerization of IRF3 and expression of IFNβ mRNA. By contrast, TRIM11 knockdown increased the IRF3 phosphorylation and IFNβ mRNA expression. We also found that TRIM11 and TBK1, a key kinase that phosphorylates IRF3 in the RIG-I pathway, interacted with each other through CC and CC2 domain, respectively. This interaction was enhanced in the presence of the TBK1 adaptor proteins, NAP1 (NF-κB activating kinase-associated protein-1), SINTBAD (similar to NAP1 TBK1 adaptor) or TANK (TRAF family member-associated NF-κB activator). Consistent with its inhibitory role in RIG-I-mediated IFNβ signaling, TRIM11 overexpression enhanced viral infectivity, whereas TRIM11 knockdown produced the opposite effect. Collectively, our results suggest that TRIM11 inhibits RIG-I-mediated IFNβ production by targeting the TBK1 signaling complex. PMID:23675467

  14. Sanguinate's effect on pial arterioles in healthy rats and cerebral oxygen tension after controlled cortical impact.

    PubMed

    Mullah, Saad H; Abutarboush, Rania; Moon-Massat, Paula F; Saha, Biswajit K; Haque, Ashraful; Walker, Peter B; Auker, Charles R; Arnaud, Francoise G; McCarron, Richard M; Scultetus, Anke H

    2016-09-01

    Sanguinate, a polyethylene glycol-conjugated carboxyhemoglobin, was investigated for cerebral vasoactivity in healthy male Sprague-Dawley rats (Study 1) and for its ability to increase brain tissue oxygen pressure (PbtO2) after controlled cortical impact (CCI) - traumatic brain injury (TBI) (Study 2). In both studies ketamine-acepromazine anesthetized rats were ventilated with 40% O2. In Study 1, a cranial window was used to measure the diameters of medium - (50-100μm) and small-sized (<50μm) pial arterioles before and after four serial infusions of Sanguinate (8mL/kg/h, cumulative 16mL/kg IV), volume-matched Hextend, or normal saline. In Study 2, PbtO2 was measured using a phosphorescence quenching method before TBI, 15min after TBI (T15) and then every 10min thereafter for 155min. At T15, rats received either 8mL/kg IV Sanguinate (40mL/kg/h) or no treatment (saline, 4mL/kg/h). Results showed: 1) in healthy rats, percentage changes in pial arteriole diameter were the same among the groups, 2) in TBI rats, PbtO2 decreased from 36.5±3.9mmHg to 19.8±3.0mmHg at T15 in both groups after TBI and did not recover in either group for the rest of the study, and 3) MAP increased 16±4mmHg and 36±5mmHg after Sanguinate in healthy and TBI rats, respectively, while MAP was unchanged in control groups. In conclusion, Sanguinate did not cause vasoconstriction in the cerebral pial arterioles of healthy rats but it also did not acutely increase PbtO2 when administered after TBI. Sanguinate was associated with an increase in MAP in both studies.

  15. Control of functional responses via reversible oxygen loss in La₁-xSrxFeO₃-δ films.

    PubMed

    Xie, Yujun; Scafetta, Mark D; Sichel-Tissot, Rebecca J; Moon, Eun Ju; Devlin, Robert C; Wu, Hanqi; Krick, Alex L; May, Steven J

    2014-03-01

    La0.3 Sr0.7 FeO3-δ films undergo dramatic changes in electronic and optical properties due to reversible oxygen loss induced by low-temperature heating. This mechanism to control the functional properties may serve as a platform for new devices or sensors in which external stimuli are used to dynamically control the composition of complex oxide heterostructures. PMID:24734299

  16. Performance of R and D sextupole trim coils for SSC (Superconducting Super Collider) dipoles

    SciTech Connect

    Wanderer, P.; Herrera, J.; Thompson, P.; Willen, E.

    1987-01-01

    For the proposed Superconducting Super Collider (SSC), trim coils placed inside the main coils of the dipoles are needed to correct for field nonuniformities due to superconducting magnetization, iron saturation, and systematic construction errors. Four 4.5 m superconducting sextupole trim coils have been made using methods adapted from printed circuit technology and suitable for mass production. This paper presents measurements of the multipoles and quench currents and compares them with SSC requirements. Based on these results, this type of trim coil (''Multiwire'') looks quite promising for use in the SSC.

  17. TRIM13 Is a Negative Regulator of MDA5-Mediated Type I Interferon Production

    PubMed Central

    Narayan, Kavitha; Waggoner, Lisa; Pham, Serena T.; Hendricks, Gabriel L.; Waggoner, Stephen N.; Conlon, Joseph; Wang, Jennifer P.

    2014-01-01

    ABSTRACT Retinoic acid-inducible gene I (RIG-I) and melanoma differentiation-associated gene 5 (MDA5) are essential intracellular detectors of viral RNA. They contribute to the type I interferon (IFN) response that is crucial for host defense against viral infections. Given the potent antiviral and proinflammatory activities elicited by the type I IFNs, induction of the type I IFN response is tightly regulated. Members of the tripartite motif (TRIM) family of proteins have recently emerged as key regulators of antiviral immunity. We show that TRIM13, an E3 ubiquitin ligase, is expressed in immune cells and is upregulated in bone marrow-derived macrophages upon stimulation with inducers of type I IFN. TRIM13 interacts with MDA5 and negatively regulates MDA5-mediated type I IFN production in vitro, acting upstream of IFN regulatory factor 3. We generated Trim13−/− mice and show that upon lethal challenge with encephalomyocarditis virus (EMCV), which is sensed by MDA5, Trim13−/− mice produce increased amounts of type I IFNs and survive longer than wild-type mice. Trim13−/− murine embryonic fibroblasts (MEFs) challenged with EMCV or poly(I·C) also show a significant increase in beta IFN (IFN-β) levels, but, in contrast, IFN-β responses to the RIG-I-detected Sendai virus were diminished, suggesting that TRIM13 may play a role in positively regulating RIG-I function. Together, these results demonstrate that TRIM13 regulates the type I IFN response through inhibition of MDA5 activity and that it functions nonredundantly to modulate MDA5 during EMCV infection. IMPORTANCE The type I interferon (IFN) response is crucial for host defense against viral infections, and proper regulation of this pathway contributes to maintaining immune homeostasis. Retinoic acid-inducible gene I (RIG-I) and melanoma differentiation-associated gene 5 (MDA5) are intracellular detectors of viral RNA that induce the type I IFN response. In this study, we show that expression of the

  18. Lower Restrictions for Sheet Metal Trimming Processes can Reduce Die Costs in The Automotive Industry

    NASA Astrophysics Data System (ADS)

    Hogg, Markus; Rohleder, Martin; Roll, Karl

    2011-05-01

    To reduce costs of trimming dies influencing parameters of the shearing process were identified, new technical approaches for a more cost efficient die design were developed, and comprehensive investigations on a sample tool were done. These approaches will be verified on a trimming die in series production. If this pilot application is successful, many sheet metal forming parts can be trimmed by less die investment in the future. In the automotive industry complex sheet metal forming parts are often trimmed by shearing. Ideally this shearing is done with a 90° angle between the cutting edge and the part surface. Because of complex part geometry different angles always occur. Often shearing angles and the effective sheet thickness increases so much that trimming in the working direction of the press machine is not possible anymore. In these cases sliding cams have to be used. That makes trimming dies expensive and maintenance intensive. For reliable trimming a good understanding of the process and its limitations is necessary. By not considering these limitations the tool can fail after a few operations or/and the resulting edge of the sheet metal part is no longer acceptable. In worst case a new tool has to be built or at least must be reworked. In operational practice so far only empirical values about limitations are known. The stability limit for trimming is not known for all shearing angles and for new high-strength materials. Therefore detailed investigations were done on a sample tool to determine these stability limits for different materials and shearing angles. The basis for starting these principle investigations was empirical values from operational practise. By using a high-quality material and a completely new shape for the trimming die elements both the reliable processable effective sheet thickness respectively the shearing angle as well as the acting forces could be optimized. In the basic investigations trimming in one direction was often still

  19. A rapid automatic method for the determination of oxygen in organic substances, using coulometry at controlled potential.

    PubMed

    Karrman, K J; Karlsson, R

    1972-01-01

    An Unterzaucher apparatus for the determination of oxygen in organic compounds is used. The iodine vapour formed in the anhydroiodic acid tube is led by a stream of nitrogen to the cathodic chamber of an electrolysis cell. Here the iodine is reduced at controlled potential at a rotating Pt-eiectrode. The amount of electricity used is determined by an electronic integrator and read from a digital voltmeter. For weights of samples in the range 0.5-6 mg the standard deviation is about 0.08% oxygen.

  20. Processes controlling dissolved oxygen and pH in the upper Willamette River basin, Oregon, 1994

    USGS Publications Warehouse

    Pogue, Ted R.; Anderson, Chauncey W.

    1995-01-01

    In July and August of 1994, the U. S. Geological Survey in cooperation with the Oregon Department of Environmental Quality (ODEQ) collected data to document the spatial extent and diel variability of dissolved oxygen (DO) concentrations and pH levels in selected reaches of streams in the upper Willamette River Basin. These data were also collected to identify primary factors that control DO concentrations downstream from major point sources as well as to provide ODEQ with data to refine calibration of their steady-state DO and nutrient models for the upper Willamette River Basin. All of the reaches studied had diel variations in DO and pH. The magnitude of the diel variations in DO ranged from 0.2 to 3.9 milligrams per liter (7 to 50 percent-saturation units based on ambient water temperature and barometric pressure) and in pH from 0.3 to 1.4 units. However, of the reaches studied, only the Coast Fork Willamette River from river mile (RM) 21.7 to 12.5 and the Willamette River from RM 151 to 141.6 had field measured violations of State standards for DO and pH. DO concentration and pH in water depend on many factors. Data were collected to examine several major factors, including BOD (biochemical oxygen demand), carbonaceous BOD, nitrogenous BOD, and measures of photosynthetic activity. Of the four study reaches, only a short stretch of the Coast Fork Willamette River has potential for important levels of oxygen consumption from BOD or nitrification. Additionally, water-column primary-productivity measurements indicated that respiration and photosynthesis by free-floating algae did not explain the observed diel variations in DO in the study reaches. Results from a simple mathematical model incorporating measures of community respiration and net primary productivities indicated that periphyton are capable of producing a diel variation of the order of magnitude observed during the August study period. In the Willamette River near Peoria, the combined periphyton DO

  1. Proposed fast-response oxygen monitoring and control system for the Langley 8-foot high-temperature tunnel

    NASA Technical Reports Server (NTRS)

    Singh, J. J.; Davis, W. T.; Puster, R. L.

    1983-01-01

    A fast-response oxygen monitoring and control system, based on a Y2O3-stabilized ZrO2 sensor, was developed and tested in the laboratory. The system is capable of maintaining oxygen concentration in the CH4-O2-air combustion product gases at 20.9 + or - 1.0 percent. If the oxygen concentration in the exhaust stream differs from that in normal air by 25 percent or more, an alarm signal is provided for automatic tunnel shutdown. The overall prototype system response time was reduced from about 1 sec in the original configuration to about 0.2 sec. The basis of operation and the results of laboratory tests of the system are described.

  2. P-method post hoc test for adaptive trimmed mean, HQ

    NASA Astrophysics Data System (ADS)

    Low, Joon Khim; Yahaya, Sharipah Soaad Syed; Abdullah, Suhaida; Yusof, Zahayu Md; Othman, Abdul Rahman

    2014-12-01

    Adaptive trimmed mean, HQ, which is one of the latest additions in robust estimators, had been proven to be good in controlling Type I error in omnibus test. However, post hoc (pairwise multiple comparison) procedure for HQ was yet to be developed then. Thus, we have taken the initiative to develop post hoc procedure for HQ. Percentile bootstrap method or P-Method was proposed as it was proven to be effective in controlling Type I error rate even when the sample size was small. This paper deliberates on the effectiveness of P-Method on HQ, denoted as P-HQ. The strength and weakness of the proposed method were put to test on various conditions created by manipulating several variables such as shape of distributions, number of groups, sample sizes, degree of variance heterogeneity and pairing of sample sizes and group variances. For such, a simulation study on 2000 datasets was conducted using SAS/IML Version 9.2. The performance of the method on various conditions was based on its ability in controlling Type I error which was benchmarked using Bradley's criterion of robustness. The finding revealed that P-HQ could effectively control Type I error for almost all the conditions investigated.

  3. p62/sequestosome-1 associates with and sustains the expression of retroviral restriction factor TRIM5alpha.

    PubMed

    O'Connor, Christopher; Pertel, Thomas; Gray, Seth; Robia, Seth L; Bakowska, Joanna C; Luban, Jeremy; Campbell, Edward M

    2010-06-01

    TRIM5 proteins mediate a potent block to the cross-species transmission of retroviruses, the most well known being the TRIM5alpha protein from rhesus macaques, which potently inhibits human immunodeficiency virus type 1 (HIV-1) infection. This restriction occurs at an early stage in the replication cycle and is mediated by the binding of TRIM5 proteins to determinants present in the retroviral capsid. TRIM5alpha, as well as other TRIM family proteins, has been shown to be regulated by interferons (IFN). Here we show that TRIM5alpha associates with another IFN-induced gene, sequestosome-1/p62 (p62). p62 plays a role in several signal transduction cascades that are important for maintaining the antiviral state of cells. Here we demonstrate that p62 localizes to both human and rhesus macaque TRIM5alpha cytoplasmic bodies, and fluorescence resonance energy transfer (FRET) analysis demonstrates that these proteins closely associate in these structures. When p62 expression was knocked down via small interfering RNA (siRNA), the number of TRIM5alpha cytoplasmic bodies and the level of TRIM5alpha protein expression were reduced in cell lines stably expressing epitope-tagged versions of TRIM5alpha. In accordance with these data, p62 knockdown resulted in reduced TRIM5alpha-mediated retroviral restriction in cells expressing epitope-tagged TRIM5alpha or expressing endogenously expressed human TRIM5alpha. p62 may therefore operate to enhance TRIM5alpha-mediated retroviral restriction, contributing to the antiviral state of cells following IFN treatment.

  4. RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance.

    PubMed

    Baxter-Burrell, Airica; Yang, Zhenbiao; Springer, Patricia S; Bailey-Serres, Julia

    2002-06-14

    Transient soil flooding limits cellular oxygen to roots and reduces crop yield. Plant response to oxygen deprivation involves increased expression of the alcohol dehydrogenase gene (ADH) and ethanolic fermentation. Disruption of the Arabidopsis gene that encodes Rop (RHO-like small G protein of plants) guanosine triphosphatase (GTPase) activating protein 4 (ROPGAP4), a Rop deactivator, elevates ADH expression in response to oxygen deprivation but decreases tolerance to stress. Rop-dependent production of hydrogen peroxide via a diphenylene iodonium chloride-sensitive calcium-dependent reduced nicotinamide adenine dinucleotide phosphate (NADPH) oxidase is necessary for induction of both ADH and RopGAP4 expression. Tolerance to oxygen deprivation requires Rop activation and RopGAP4-dependent negative feedback regulation. This Rop signal transduction rheostat balances the ability to increase ethanolic fermentation with survival.

  5. Enhancement of the efficiency and control of emission parameters of an unstable-resonator chemical oxygen-iodine laser

    SciTech Connect

    Boreisho, A S; Lobachev, V V; Savin, A V; Strakhov, S Yu; Trilis, A V

    2007-07-31

    The outlook is considered for the development of a high-power supersonic flowing chemical oxygen-iodine laser operating as an amplifier and controlled by radiation from a master oscillator by using an unstable resonator with a hole-coupled mirror. The influence of the seed radiation intensity, the coupling-hole diameter, the active-medium length, and the magnification factor on the parameters of laser radiation is analysed. It is shown that the use of such resonators is most advisable in medium-power oxygen-iodine lasers for which classical unstable resonators are inefficient because of their low magnification factors. The use of unstable resonators with a hole-coupled mirror and injection provides the control of radiation parameters and a considerable increase in the output power and brightness of laser radiation. (control of laser radiation parameters)

  6. Maximizing biomass concentration in baker's yeast process by using a decoupled geometric controller for substrate and dissolved oxygen.

    PubMed

    Chopda, Viki R; Rathore, Anurag S; Gomes, James

    2015-11-01

    Biomass production by baker's yeast in a fed-batch reactor depends on the metabolic regime determined by the concentration of glucose and dissolved oxygen in the reactor. Achieving high biomass concentration in turn is dependent on the dynamic interaction between the glucose and dissolved oxygen concentration. Taking this into account, we present in this paper the implementation of a decoupled input-output linearizing controller (DIOLC) for maximizing biomass in a fed-batch yeast process. The decoupling is based on the inversion of 2×2 input-output matrix resulting from global linearization. The DIOLC was implemented online using a platform created in LabVIEW employing a TCP/IP protocol via the reactor's built-in electronic system. An improvement in biomass yield by 23% was obtained compared to that using a PID controller. The results demonstrate superior capability of the DIOLC and that the cumulative effect of smoother control action contributes to biomass maximization. PMID:26233328

  7. Size-controlled large-diameter and few-walled carbon nanotube catalysts for oxygen reduction

    NASA Astrophysics Data System (ADS)

    Wang, Xianliang; Li, Qing; Pan, Hengyu; Lin, Ye; Ke, Yujie; Sheng, Haiyang; Swihart, Mark T.; Wu, Gang

    2015-11-01

    We demonstrate a new strategy for tuning the size of large-diameter and few-walled nitrogen-doped carbon nanotubes (N-CNTs) from 50 to 150 nm by varying the transition metal (TM = Fe, Co, Ni or Mn) used to catalyze graphitization of dicyandiamide. Fe yielded the largest tubes, followed by Co and Ni, while Mn produced a clot-like carbon morphology. We show that morphology is correlated with electrocatalytic activity for the oxygen reduction reaction (ORR). A clear trend of Fe > Co > Ni > Mn for the ORR catalytic activity was observed, in both alkaline media and more demanding acidic media. The Fe-derived N-CNTs exhibited the highest BET (~870 m2 g-1) and electrochemically accessible (~450 m2 g-1) surface areas and, more importantly, the highest concentration of nitrogen incorporated into the carbon planes. Thus, in addition to the intrinsic high activity of Fe-derived catalysts, the high surface area and nitrogen doping contribute to high ORR activity. This work, for the first time, demonstrates size-controlled synthesis of large-diameter N-doped carbon tube electrocatalysts by varying the metal used in N-CNT generation. Electrocatalytic activity of the Fe-derived catalyst is already the best among studied metals, due to the high intrinsic activity of possible Fe-N coordination. This work further provides a promising route to advanced Fe-N-C nonprecious metal catalysts by generating favorable morphology with more active sites and improved mass transfer.We demonstrate a new strategy for tuning the size of large-diameter and few-walled nitrogen-doped carbon nanotubes (N-CNTs) from 50 to 150 nm by varying the transition metal (TM = Fe, Co, Ni or Mn) used to catalyze graphitization of dicyandiamide. Fe yielded the largest tubes, followed by Co and Ni, while Mn produced a clot-like carbon morphology. We show that morphology is correlated with electrocatalytic activity for the oxygen reduction reaction (ORR). A clear trend of Fe > Co > Ni > Mn for the ORR catalytic

  8. Transcriptomic and proteomic analyses of the Aspergillus fumigatus hypoxia response using an oxygen-controlled fermenter

    PubMed Central

    2012-01-01

    Background Aspergillus fumigatus is a mold responsible for the majority of cases of aspergillosis in humans. To survive in the human body, A. fumigatus must adapt to microenvironments that are often characterized by low nutrient and oxygen availability. Recent research suggests that the ability of A. fumigatus and other pathogenic fungi to adapt to hypoxia contributes to their virulence. However, molecular mechanisms of A. fumigatus hypoxia adaptation are poorly understood. Thus, to better understand how A. fumigatus adapts to hypoxic microenvironments found in vivo during human fungal pathogenesis, the dynamic changes of the fungal transcriptome and proteome in hypoxia were investigated over a period of 24 hours utilizing an oxygen-controlled fermenter system. Results Significant increases in transcripts associated with iron and sterol metabolism, the cell wall, the GABA shunt, and transcriptional regulators were observed in response to hypoxia. A concomitant reduction in transcripts was observed with ribosome and terpenoid backbone biosynthesis, TCA cycle, amino acid metabolism and RNA degradation. Analysis of changes in transcription factor mRNA abundance shows that hypoxia induces significant positive and negative changes that may be important for regulating the hypoxia response in this pathogenic mold. Growth in hypoxia resulted in changes in the protein levels of several glycolytic enzymes, but these changes were not always reflected by the corresponding transcriptional profiling data. However, a good correlation overall (R2 = 0.2, p < 0.05) existed between the transcriptomic and proteomics datasets for all time points. The lack of correlation between some transcript levels and their subsequent protein levels suggests another regulatory layer of the hypoxia response in A. fumigatus. Conclusions Taken together, our data suggest a robust cellular response that is likely regulated both at the transcriptional and post-transcriptional level in response to hypoxia

  9. Oxygen Isotope in Phosphate an Indicator of Phosphorous Cycling in the Ocean - Controls, and Applications

    NASA Astrophysics Data System (ADS)

    Paytan, A.; Roberts, K.; Defforey, D.; McLaughlin, K.; Lomas, M. W.; Church, M. J.; Mackey, K. R.

    2012-12-01

    In order to better constrain the parameters affecting oxygen isotope exchange between water and phosphate via biochemical reactions a set of culture experiments were conducted. Different species of phytoplankton were grown in seawater at various temperatures, light levels, and phosphate concentrations. The oxygen isotopic composition in the phosphate source, algal cells, and the isotopic composition oxygen in the dissolved inorganic phosphate (DIP) were measured. Results showing the effect of species, temperature, light and P availability on intracellular oxygen isotope exchange between phosphorus compounds and water will be presented. The effect of these parameters on the utility of the oxygen isotopic composition of phosphate as a tracer of phosphate utilization rate in the ocean will be discussed. This information is fundamental to any application of isotopic composition of oxygen of dissolved inorganic or organic phosphate to quantify the dynamics of phosphorus cycling in aquatic systems. The data will be utilized to investigate seasonal changes in phosphate sources and cycling in the open ocean and how these relate to phytoplankton abundance, hydrography, and nutrient concentrations.

  10. Peroxone mineralization of chemical oxygen demand for direct potable water reuse: Kinetics and process control.

    PubMed

    Wu, Tingting; Englehardt, James D

    2015-04-15

    Mineralization of organics in secondary effluent by the peroxone process was studied at a direct potable water reuse research treatment system serving an occupied four-bedroom, four bath university residence hall apartment. Organic concentrations were measured as chemical oxygen demand (COD) and kinetic runs were monitored at varying O3/H2O2 dosages and ratios. COD degradation could be accurately described as the parallel pseudo-1st order decay of rapidly and slowly-oxidizable fractions, and effluent COD was reduced to below the detection limit (<0.7 mg/L). At dosages ≥4.6 mg L(-1) h(-1), an O3/H2O2 mass ratio of 3.4-3.8, and initial COD <20 mg/L, a simple first order decay was indicated for both single-passed treated wastewater and recycled mineral water, and a relationship is proposed and demonstrated to estimate the pseudo-first order rate constant for design purposes. At this O3/H2O2 mass ratio, ORP and dissolved ozone were found to be useful process control indicators for monitoring COD mineralization in secondary effluent. Moreover, an average second order rate constant for OH oxidation of secondary effluent organics (measured as MCOD) was found to be 1.24 × 10(7) ± 0.64 × 10(7) M(-1) S(-1). The electric energy demand of the peroxone process is estimated at 1.73-2.49 kW h electric energy for removal of one log COD in 1 m(3) secondary effluent, comparable to the energy required for desalination of medium strength seawater. Advantages/disadvantages of the two processes for municipal wastewater reuse are discussed.

  11. Peroxone mineralization of chemical oxygen demand for direct potable water reuse: Kinetics and process control.

    PubMed

    Wu, Tingting; Englehardt, James D

    2015-04-15

    Mineralization of organics in secondary effluent by the peroxone process was studied at a direct potable water reuse research treatment system serving an occupied four-bedroom, four bath university residence hall apartment. Organic concentrations were measured as chemical oxygen demand (COD) and kinetic runs were monitored at varying O3/H2O2 dosages and ratios. COD degradation could be accurately described as the parallel pseudo-1st order decay of rapidly and slowly-oxidizable fractions, and effluent COD was reduced to below the detection limit (<0.7 mg/L). At dosages ≥4.6 mg L(-1) h(-1), an O3/H2O2 mass ratio of 3.4-3.8, and initial COD <20 mg/L, a simple first order decay was indicated for both single-passed treated wastewater and recycled mineral water, and a relationship is proposed and demonstrated to estimate the pseudo-first order rate constant for design purposes. At this O3/H2O2 mass ratio, ORP and dissolved ozone were found to be useful process control indicators for monitoring COD mineralization in secondary effluent. Moreover, an average second order rate constant for OH oxidation of secondary effluent organics (measured as MCOD) was found to be 1.24 × 10(7) ± 0.64 × 10(7) M(-1) S(-1). The electric energy demand of the peroxone process is estimated at 1.73-2.49 kW h electric energy for removal of one log COD in 1 m(3) secondary effluent, comparable to the energy required for desalination of medium strength seawater. Advantages/disadvantages of the two processes for municipal wastewater reuse are discussed. PMID:25704155

  12. Periodic trim solutions with hp-version finite elements in time

    NASA Technical Reports Server (NTRS)

    Peters, David A.; Hou, Lin-Jun

    1990-01-01

    Finite elements in time as an alternative strategy for rotorcraft trim problems are studied. The research treats linear flap and linearized flap-lag response both for quasi-trim and trim cases. The connection between Fourier series analysis and hp-finite elements for periodic a problem is also examined. It is proved that Fourier series is a special case of space-time finite elements in which one element is used with a strong displacement formulation. Comparisons are made with respect to accuracy among Fourier analysis, displacement methods, and mixed methods over a variety parameters. The hp trade-off is studied for the periodic trim problem to provide an optimum step size and order of polynomial for a given error criteria. It is found that finite elements in time can outperform Fourier analysis for periodic problems, and for some given error criteria. The mixed method provides better results than does the displacement method.

  13. 82. Neg. No. F66A, Apr 13, 1930, INTERIORASSEMBLY BUILDING, TRIM ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    82. Neg. No. F-66A, Apr 13, 1930, INTERIOR-ASSEMBLY BUILDING, TRIM LINE AND GLASS DEPARTMENTS - Ford Motor Company Long Beach Assembly Plant, Assembly Building, 700 Henry Ford Avenue, Long Beach, Los Angeles County, CA

  14. Feasibility of Supersonic Aircraft Concepts for Low-Boom and Flight Trim Constraints

    NASA Technical Reports Server (NTRS)

    Li, Wu

    2015-01-01

    This paper documents a process for analyzing whether a particular supersonic aircraft configuration layout and a given cruise condition are feasible to achieve a trimmed low-boom design. This process was motivated by the need to know whether a particular configuration at a given cruise condition could be reshaped to satisfy both low-boom and flight trim constraints. Without such a process, much effort could be wasted on shaping a configuration layout at a cruise condition that could never satisfy both low-boom and flight trim constraints simultaneously. The process helps to exclude infeasible configuration layouts with minimum effort and allows a designer to develop trimmed low-boom concepts more effectively. A notional low-boom supersonic demonstrator concept is used to illustrate the analysis/design process.

  15. Modelling of feather pecking behavior in beak-trimmed and non-beak-trimmed crossbred laying hens: variance component and trait-based approach.

    PubMed

    Sun, Y; Ellen, E D; van der Poel, J J; Parmentier, H K; Bijma, P

    2014-04-01

    Because of a ban on the use of beak trimming in some European countries, feather pecking is becoming a substantial problem in the layer industry, both from animal welfare and economic points of view. The feather condition score (FCS) as a measure of feather damage has been shown to be closely related to feather pecking behavior in laying hens housed in groups. To obtain a better understanding of genetic and other biological mechanisms underlying feather pecking behavior, data on FCS of a population of 2,724 female offspring from crossing 50 male W1 and 907 female WB purebred lines were used. The offspring of 25 sires were beak-trimmed, and the offspring of another 25 sires were non-beak-trimmed. Titers of plasma natural antibody (NAb) isotypes IgM and IgG binding keyhole limpet hemocyanin at 24 wk of age were measured. Feather condition was scored at 53 wk of age. In the first part of the present study, we estimated genetic parameters for FCS with 2 variance components models: a traditional linear animal model and a model combining direct and associative genetic effects. In the second part of the present study, a trait-based analysis for FCS was conducted to investigate whether NAb isotype titers can explain variation in FCS among individuals, by fitting a linear mixed model. Though the estimated associative genetic variance was substantial, associative effects for FCS were not statistically significant in both populations (P = 0.09 in beak-trimmed birds, and P = 0.08 in non-beak-trimmed birds). This suggests an insufficient number of records on FCS. Individual's NAb isotypes titers did not show direct effect for FCS of itself, but individual's IgG titers showed a suggestive effect on the FCS of cage mates (associative effect) in beak-trimmed laying hens, which need further confirmation. PMID:24706953

  16. Modelling of feather pecking behavior in beak-trimmed and non-beak-trimmed crossbred laying hens: variance component and trait-based approach.

    PubMed

    Sun, Y; Ellen, E D; van der Poel, J J; Parmentier, H K; Bijma, P

    2014-04-01

    Because of a ban on the use of beak trimming in some European countries, feather pecking is becoming a substantial problem in the layer industry, both from animal welfare and economic points of view. The feather condition score (FCS) as a measure of feather damage has been shown to be closely related to feather pecking behavior in laying hens housed in groups. To obtain a better understanding of genetic and other biological mechanisms underlying feather pecking behavior, data on FCS of a population of 2,724 female offspring from crossing 50 male W1 and 907 female WB purebred lines were used. The offspring of 25 sires were beak-trimmed, and the offspring of another 25 sires were non-beak-trimmed. Titers of plasma natural antibody (NAb) isotypes IgM and IgG binding keyhole limpet hemocyanin at 24 wk of age were measured. Feather condition was scored at 53 wk of age. In the first part of the present study, we estimated genetic parameters for FCS with 2 variance components models: a traditional linear animal model and a model combining direct and associative genetic effects. In the second part of the present study, a trait-based analysis for FCS was conducted to investigate whether NAb isotype titers can explain variation in FCS among individuals, by fitting a linear mixed model. Though the estimated associative genetic variance was substantial, associative effects for FCS were not statistically significant in both populations (P = 0.09 in beak-trimmed birds, and P = 0.08 in non-beak-trimmed birds). This suggests an insufficient number of records on FCS. Individual's NAb isotypes titers did not show direct effect for FCS of itself, but individual's IgG titers showed a suggestive effect on the FCS of cage mates (associative effect) in beak-trimmed laying hens, which need further confirmation.

  17. Oxygenated Phosphine Fumigation for Control of Light Brown Apple Moth (Lepidoptera: Tortricidae) Eggs on Cut-Flowers.

    PubMed

    Liu, Samuel S; Liu, Yong-Biao; Simmons, Gregory S

    2015-08-01

    Light brown apple moth, Epiphyas postvittana (Walker), eggs were subjected to oxygenated phosphine fumigation treatments under 70% oxygen on cut flowers to determine efficacy and safety. Five cut flower species: roses, lilies, tulips, gerbera daisy, and pompon chrysanthemums, were fumigated in separate groups with 2,500 ppm phosphine for 72 h at 5°C. Egg mortality and postharvest quality of cut flowers were determined after fumigation. Egg mortalities of 99.7-100% were achieved among the cut flower species. The treatment was safe to all cut flowers except gerbera daisy. A 96-h fumigation treatment with 2,200 ppm phosphine of eggs on chrysanthemums cut flowers also did not achieve complete control of light brown apple moth eggs. A simulation of fumigation in hermetically sealed fumigation chambers with gerbera daisy showed significant accumulations of carbon dioxide and ethylene by the end of 72-h sealing. However, oxygenated phosphine fumigations with carbon dioxide and ethylene absorbents did not reduce the injury to gerbera daisy, indicating that it is likely that phosphine may directly cause the injury to gerbera daisy cut flowers. The study demonstrated that oxygenated phosphine fumigation is effective against light brown apple moth eggs. However, it may not be able to achieve the probit9 quarantine level of control and the treatment was safe to most of the cut flower species.

  18. What processes control the oxygen isotopes of soil bio-available phosphate?

    NASA Astrophysics Data System (ADS)

    Gross, Avner; Angert, Alon

    2015-06-01

    The biological availability of phosphorus (P) is considered to be the limiting factor for plant growth in many natural and agricultural soils. Recent studies demonstrated that valuable information on soil P dynamics can be gained from the stable oxygen isotopes of soil phosphate (δ18OP). However, to interpret this information correctly, our understanding of the processes that controls soil phosphate δ18OP values needs to be improved since most of the current data is based primarily on laboratory studies of pure microbial cultures and enzymatic assays and may not be relevant to soils. Here we designed a series of controlled soil incubation experiments to study the actual isotopic effects induced by abiotic reactions, biological uptake, microbial turnover and organic-P mineralization on soil phosphate δ18OP values. We used this data to estimate the role of these processes in mediating soil P availability. Our study was conducted on Mediterranean soils sampled from the same site during winter, spring and summer. The soils were incubated with various mineral and organic-P compounds and their bioavailable phosphate concentrations and δ18OP values were measured. We confirmed that the role of abiotic reactions on phosphate δ18OP values was negligible and that the δ18OP values of the added phosphate were rapidly driven towards isotopic equilibrium with soil water. We suggest this process was mediated by rapid microbial phosphate turnover. Yet, we did not detect the expected isotopic enrichment effect associated with phosphate biological uptake. In another set of incubation experiments we demonstrated that mineralization of phosphate from organic compounds, such as phospho-mono-ester (PME) and phosphor-di-ester (PDE), produced an offset from isotopic equilibrium, as a result of the strong isotopic fractionation associated with the mineralization process. However, the δ18OP values recorded by the mineralized phosphate were gradually driven back towards isotopic

  19. Novel pattern trimming and shrink material (PTM (PTD) and PSM (NTI)) for ArF/EUV extension

    NASA Astrophysics Data System (ADS)

    Nishita, Tokio; Sakamoto, Rikimaru

    2016-03-01

    In recent years, as next-generation lithography, various exposure techniques have been studied such as Extreme Ultraviolet Lithography (EUVL), Directed Self Assembly (DSA) and multiple patterning processes. In particular, EUVL is the most promising candidate for the high volume manufacturing below N7 node. However, there are many problems to be solved such as materials, through put of the exposure tool and mask defect. With respect to the DSA, the fine patterning with block copolymer has been studied. But the DSA process also has the several problems such as the complicated process flow in chemo process, quality of the block copolymer and defect. On the other hand, although the multiple patterning has been applied the device manufacturing for several years, there are some problems such as significant increase in cost due to increasing of the process steps and the overlay accuracy at the multiple process steps. Therefore, Pattern Trimming Materials (PTM) and Pattern Shrink Materials (PSM) were developed for miniaturization using the current exposure technology. The PTM is applied on a resist pattern produced in a Positive Tone Development (PTD) process and trim the resist pattern. It is possible to control the trimming amount by changing the formulation and the baking process. It has been confirmed that the effectiveness of PTM is not only for the L/S pattern, but also for the 2D pattern like pillar pattern. At the same time, it is confirmed that the PTM can improve the Line Width Roughness (LWR) and Local Critical Dimension Uniformity (LCDU). On the other hand, the PSM is applied on the pattern prepared in a Negative Tone Imaging (NTI) process and then it can shrink the resist pattern after baking. We adopted the new concept for pattern shrinkage process which dramatically improved LCDU with the hole shrinkage. In this paper, we demonstrated the L/S and pillar pattern trimming by PTM and the C/H shrink by PSM with ArF immersion (ArF im) condition and EUV condition

  20. Claw length recommendations for dairy cow foot trimming

    PubMed Central

    Archer, S. C.; Newsome, R.; Dibble, H.; Sturrock, C. J.; Chagunda, M. G. G.; Mason, C. S.; Huxley, J. N.

    2015-01-01

    The aim was to describe variation in length of the dorsal hoof wall in contact with the dermis for cows on a single farm, and hence, derive minimum appropriate claw lengths for routine foot trimming. The hind feet of 68 Holstein-Friesian dairy cows were collected post mortem, and the internal structures were visualised using x-ray µCT. The internal distance from the proximal limit of the wall horn to the distal tip of the dermis was measured from cross-sectional sagittal images. A constant was added to allow for a minimum sole thickness of 5 mm and an average wall thickness of 8 mm. Data were evaluated using descriptive statistics and two-level linear regression models with claw nested within cow. Based on 219 claws, the recommended dorsal wall length from the proximal limit of hoof horn was up to 90 mm for 96 per cent of claws, and the median value was 83 mm. Dorsal wall length increased by 1 mm per year of age, yet 85 per cent of the null model variance remained unexplained. Overtrimming can have severe consequences; the authors propose that the minimum recommended claw length stated in training materials for all Holstein-Friesian cows should be increased to 90 mm. PMID:26220848

  1. Claw length recommendations for dairy cow foot trimming.

    PubMed

    Archer, S C; Newsome, R; Dibble, H; Sturrock, C J; Chagunda, M G G; Mason, C S; Huxley, J N

    2015-09-01

    The aim was to describe variation in length of the dorsal hoof wall in contact with the dermis for cows on a single farm, and hence, derive minimum appropriate claw lengths for routine foot trimming. The hind feet of 68 Holstein-Friesian dairy cows were collected post mortem, and the internal structures were visualised using x-ray µCT. The internal distance from the proximal limit of the wall horn to the distal tip of the dermis was measured from cross-sectional sagittal images. A constant was added to allow for a minimum sole thickness of 5 mm and an average wall thickness of 8 mm. Data were evaluated using descriptive statistics and two-level linear regression models with claw nested within cow. Based on 219 claws, the recommended dorsal wall length from the proximal limit of hoof horn was up to 90 mm for 96 per cent of claws, and the median value was 83 mm. Dorsal wall length increased by 1 mm per year of age, yet 85 per cent of the null model variance remained unexplained. Overtrimming can have severe consequences; the authors propose that the minimum recommended claw length stated in training materials for all Holstein-Friesian cows should be increased to 90 mm. PMID:26220848

  2. Experimental and Computational Analysis of Shuttle Orbiter Hypersonic Trim Anomaly

    NASA Technical Reports Server (NTRS)

    Brauckmann, Gregory J.; Paulson, John W., Jr.; Weilmuenster, K. James

    1995-01-01

    During the high-Mach-number, high-altitude portion of the first entry of the Shuttle Orbiter, the vehicle exhibited a nose-up pitching moment relative to preflight prediction of approximately Delta Cm = 0.03. This trim anomaly has been postulated to be due to compressibility, viscous, and/or real-gas (lowered specific heat ratio gamma) effects on basic body pitching moment, body-flap effectiveness, or both. In order to assess the relative contribution of each of these effects, an experimental study was undertaken to examine the effects of Mach number, Reynolds number, and ratio of specific heats. Complementary computational solutions were obtained for wind-tunnel and flight conditions. The primary cause of the anomaly was determined to be lower pressures on the aft windward surface of the Orbiter than deduced from hypersonic wind-tunnel tests with ideal- or near-ideal-gas test flow. The lower pressure levels are a result of the lowering of the flowfield gamma due to high-temperature effects. This phenomenon was accurately simulated in a hypersonic wind tunnel using a heavy gas, which provided a lower, gamma, and was correctly predicted by Navier-Stokes computations using nonequilibrium chemistry.

  3. Polyubiquitylation of AMF requires cooperation between the gp78 and TRIM25 ubiquitin ligases.

    PubMed

    Wang, Ying; Ha, Seung-Wook; Zhang, Tianpeng; Kho, Dhong-Hyo; Raz, Avraham; Xie, Youming

    2014-04-30

    gp78 is a ubiquitin ligase that plays a vital role in endoplasmic reticulum (ER)-associated degradation (ERAD). Here we report that autocrine motility factor (AMF), also known as phosphoglucose isomerase (PGI), is a novel substrate of gp78. We show that polyubiquitylation of AMF requires cooperative interaction between gp78 and the ubiquitin ligase TRIM25 (tripartite motif-containing protein 25). While TRIM25 mediates the initial round of ubiquitylation, gp78 catalyzes polyubiquitylation of AMF. The E4-like activity of gp78 was illustrated by an in vitro polyubiquitylation assay using Ub-DHFR as a model substrate. We further demonstrate that TRIM25 ubiquitylates gp78 and that overexpression of TRIM25 accelerates the degradation of gp78. Our data suggest that TRIM25 not only cooperates with gp78 in polyubiquitylation of AMF but also gauges the steady-state level of gp78. This study uncovers a previously unknown functional link between gp78 and TRIM25 and provides mechanistic insight into gp78-mediated protein ubiquitylation.

  4. Simultaneous neutralization and innate immune detection of a replicating virus by TRIM21.

    PubMed

    Watkinson, R E; Tam, J C H; Vaysburd, M J; James, L C

    2013-07-01

    Tripartite motif-containing 21 (TRIM21) is a cytosolic immunoglobulin receptor that mediates antibody-dependent intracellular neutralization (ADIN). Here we show that TRIM21 potently inhibits the spreading infection of a replicating cytopathic virus and activates innate immunity. We used a quantitative PCR (qPCR)-based assay to measure in vitro replication of mouse adenovirus type 1 (MAV-1), a virus that causes dose-dependent hemorrhagic encephalitis in mice. Using this assay, we show that genetic ablation of TRIM21 or chemical inhibition of either the AAA ATPase p97/valosin-containing protein (VCP) or the proteasome results in a >1,000-fold increase in the relative level of infection in the presence of immune serum. Moreover, the TRIM21-mediated ability of antisera to block replication was a consistent feature of the humoral immune response in immunized mice. In the presence of immune sera and upon infection, TRIM21 also activates a proinflammatory response, resulting in secretion of tumor necrosis factor alpha (TNF-α) and interleukin-6 (IL-6). These results demonstrate that TRIM21 provides a potent block to spreading infection and induces an antiviral state. PMID:23596308

  5. The relative importance of selected factors controlling the oxygen dynamics in the water column of the Baltic Sea

    NASA Astrophysics Data System (ADS)

    Miladinova, S.; Stips, A.

    2009-09-01

    A 1-D biogeochemical/physical model of marine systems has been applied to study the oxygen cycle in four stations of the different sub-basins of the Baltic Sea, namely, in Gotland Deep, Bornholm, Arkona and Fladen. The model consists of biogeochemical model of Neumann et al. (2002) coupled with the 1-D General Ocean Turbulence Model (GOTM). The model has been forced with meteorological data from the ECMWF reanalysis project for the period 1998-2003, producing a 6-year hindcast validated with datasets from the Baltic Environmental Database (BED) for the same period. The vertical profiles of temperature and salinity are relaxed towards both profiles provided by 3-D simulations of General Estuarine Turbulent Model (GETM) and observed profiles from BED. Modifications in the parameterisation of the air/sea oxygen fluxes have led to significant improvement of the model results in the surface and intermediate water levels. The largest mismatch with observation is found in simulating the oxygen dynamics in the Baltic Sea bottom waters. The model results demonstrate the good capability of the model to predict the time-evolution of the physical and biogeochemical variables at all different stations. Comparative analysis of the modelled oxygen concentrations with respect to the observation data is performed to distinguish the relative importance of several factors on the seasonal, interannual and long-term variations of oxygen. It is found that the natural physical factors, like the magnitude of the vertical turbulent mixing, wind speed, the variation in temperature and salinity field are the major factors controlling the oxygen dynamics in the Baltic Sea. The influence of limiting nutrients is less pronounced, at least under the nutrient flux parameterisation assumed in the model.

  6. Identification and characterization of a nuclear localization signal of TRIM28 that overlaps with the HP1 box

    SciTech Connect

    Moriyama, Tetsuji; Sangel, Percival; Yamaguchi, Hiroki; Obuse, Chikashi; Miyamoto, Yoichi; Oka, Masahiro; Yoneda, Yoshihiro

    2015-07-03

    Tripartite motif-containing 28 (TRIM28) is a transcription regulator, which forms a repressor complex containing heterochromatin protein 1 (HP1). Here, we report identification of a nuclear localization signal (NLS) within the 462-494 amino acid region of TRIM28 that overlaps with its HP1 binding site, HP1 box. GST-pulldown experiments revealed the interaction of the arginine-rich TRIM28 NLS with various importin α subtypes (α1, α2 and α4). In vitro transport assay demonstrated that nuclear localization of GFP-TRIM28 NLS is mediated by importin αs, in conjunction with importin β1 and Ran. Further, we demonstrated that HP1 and importin αs compete for binding to TRIM28. Together, our findings suggest that importin α has an essential role in the nuclear delivery and preferential HP1 interaction of TRIM28. - Highlights: • TRIM28 contains an NLS within the 462-494 amino acid region. • The nuclear import of TRIM28 is mediated by importin α/importin β1. • TRIM28 NLS overlaps with HP1 Box. • HP1 and importin α compete for binding to TRIM28.

  7. Upregulated TRIM29 promotes proliferation and metastasis of nasopharyngeal carcinoma via PTEN/AKT/mTOR signal pathway

    PubMed Central

    Sun, Jian; Zhang, Mei-Yin; Wang, Meng-He; Yang, Yang; Wang, Hui-Yun; Mai, Shi-Juan

    2016-01-01

    Tripartite motif–containing 29 (TRIM29) has been reported to be dysregulated in human cancers. Up-regulation of TRIM29 was first observed in NPC cell lines by a genome-wide transcriptome analysis in our previous study. However, its expression biological function and clinical significance in nasopharyngeal carcinoma (NPC) remain unclear. In this study, TRIM29 expression was validated by qRT-PCR and immunohistochemistry in 69 NPC samples. Notably, TRIM29 protein expression was significantly and positively correlated with the tumor size, clinical stage and metastasis. TRIM29 was identified as the direct target of miR-335-5p and miR-15b-5p, both of which were down-regulated and negatively associated with TRIM29 expression in NPC cell lines and clinical samples. Ectopic TRIM29 expression promoted proliferation, epithelial-mesenchymal transition (EMT), migration and invasion in NPC cells, while its depletion inhibited cell invasion and EMT phenotype. Mechanistically, TRIM29 overexpression reduced PTEN expression and increase phosphorylated protein level of AKT, p70S6K and 4E-BP1. Correspondingly, AKT inhibitor and Rapamycin blocked the effect of TRIM29 on cell invasion. In conclusion, our results suggest that miR-335-5p and miR-15b-5p down-regulation results in TRIM29 over-expression, which induces proliferation, EMT and metastasis of NPC through the PTEN/AKT/mTOR signaling pathway. PMID:26872369

  8. Research note: the performance of spring- and summer-reared broilers as affected by precision beak trimming at seven days of age.

    PubMed

    Christmas, R B

    1993-12-01

    In each of two duplicate trials approximately 2,500 day-old Peterson x Arbor Acres straight-run broiler chicks were equally divided between two treatments of three pens each. Treatment 1 was maintained as controls (C), and Treatment 2 birds were precision beak-trimmed (PBT) at 7 days of age. Feed and water were supplied for ad libitum consumption to both groups. Trials 1 and 2 were initiated in March and June, respectively. Performance of spring-reared broilers were comparable regardless of beak trimming procedure, except that PBT broilers experienced slightly higher mortality after PBT. Final body weights of the summer-reared broilers were 15% lower than those reared in the spring. Additionally, PBT resulted in significantly reduced final body weights and feed intake. There were no significant differences in mortality or feed conversion due to PBT.

  9. Designing a Microfluidic Device with Integrated Ratiometric Oxygen Sensors for the Long-Term Control and Monitoring of Chronic and Cyclic Hypoxia

    PubMed Central

    Grist, Samantha M.; Schmok, Jonathan C.; Liu, Meng-Chi (Andy); Chrostowski, Lukas; Cheung, Karen C.

    2015-01-01

    Control of oxygen over cell cultures in vitro is a topic of considerable interest, as chronic and cyclic hypoxia can alter cell behaviour. Both static and transient hypoxic levels have been found to affect tumour cell behaviour; it is potentially valuable to include these effects in early, in vitro stages of drug screening. A barrier to their inclusion is that rates of transient hypoxia can be a few cycles/hour, which is difficult to reproduce in traditional in vitro cell culture environments due to long diffusion distances from control gases to the cells. We use a gas-permeable three-layer microfluidic device to achieve spatial and temporal oxygen control with biologically-relevant switching times. We measure the oxygen profiles with integrated, ratiometric optical oxygen sensors, demonstrate sensor and system stability over multi-day experiments, and characterize a pre-bleaching process to improve sensor stability. We show, with both finite-element modelling and experimental data, excellent control over the oxygen levels by the device, independent of fluid flow rate and oxygenation for the operating flow regime. We measure equilibration times of approximately 10 min, generate complex, time-varying oxygen profiles, and study the effects of oxygenated media flow rates on the measured oxygen levels. This device could form a useful tool for future long-term studies of cell behaviour under hypoxia. PMID:26287202

  10. Designing a Microfluidic Device with Integrated Ratiometric Oxygen Sensors for the Long-Term Control and Monitoring of Chronic and Cyclic Hypoxia.

    PubMed

    Grist, Samantha M; Schmok, Jonathan C; Liu, Meng-Chi Andy; Chrostowski, Lukas; Cheung, Karen C

    2015-08-14

    Control of oxygen over cell cultures in vitro is a topic of considerable interest, as chronic and cyclic hypoxia can alter cell behaviour. Both static and transient hypoxic levels have been found to affect tumour cell behaviour; it is potentially valuable to include these effects in early, in vitro stages of drug screening. A barrier to their inclusion is that rates of transient hypoxia can be a few cycles/hour, which is difficult to reproduce in traditional in vitro cell culture environments due to long diffusion distances from control gases to the cells. We use a gas-permeable three-layer microfluidic device to achieve spatial and temporal oxygen control with biologically-relevant switching times. We measure the oxygen profiles with integrated, ratiometric optical oxygen sensors, demonstrate sensor and system stability over multi-day experiments, and characterize a pre-bleaching process to improve sensor stability. We show, with both finite-element modelling and experimental data, excellent control over the oxygen levels by the device, independent of fluid flow rate and oxygenation for the operating flow regime. We measure equilibration times of approximately 10 min, generate complex, time-varying oxygen profiles, and study the effects of oxygenated media flow rates on the measured oxygen levels. This device could form a useful tool for future long-term studies of cell behaviour under hypoxia.

  11. Three-dimensional integration of vertically coupled microring resonator filters: fabrication and wavelength trimming technologies

    NASA Astrophysics Data System (ADS)

    Kokubun, Yasuo

    2003-04-01

    We have proposed and demonstrated a vertically coupled microring resonator filter as an Add/Drop wavelength filter. The ultra-compact ring resonantor can be realized by the ultra-high index contrast waveguide (=34%) consisting of glass core (n=1.80) and air cladding and the vertically coupled configuration, where a microring resonator with a few tens micron radius is stacked on the crossing point of cross-grid bus waveguides. The cross-grid topology of busline waveguides and very small ring radius enables a dense integration of filter circuit. To achieve the 3D integration, we developed a novel fabrication process of flat-top waveguide using a so-called lift-off process and the SOG (Spin-On-Glass), and successfully obtained a very smooth and flat surface of lower waveguide with a step height less than 0.01μm. In addition, to manipulate the center wavelength after fabrication, we developed two trimming methods; one is the use of UV-sensitive polymer for the over-cladding, and the other is the direct UV irradiation to the ring ocre made of Ta2O5-SiO2 compound glass. Utilizing the former method, the channel spacing of filter array was precisely controlled within 0.5nm, which can not be achieved by the control of ring radius.

  12. Controlling the electronic properties of Er2O3 thin film by oxygen vacancies

    NASA Astrophysics Data System (ADS)

    Wang, Aaron; Yost, Andrew; Jain, Vivek; Dai, Qilin; Tang, Jinke; Chien, Teyu

    With a high dielectric constant and wide bandgap, Er2O3 is suitable for applications in electronic and optical devices. It is known that in many oxide materials, oxygen vacancy concentration plays a decisive role in engineering the properties of the oxides. To address the oxygen vacancy concentration effects on the properties of Er2O3, here we present Scanning Tunneling Microscopy and Spectroscopy (STM/S) and X-Ray Diffraction (XRD) studies of the Er2O3 thin film made by Pulsed Laser Deposition (PLD). XRD shows Er2O3 thin film deposited at 700oC in high vacuum (HV) (sample 1) has broader peaks compared to that of the one deposited at room temperature (RT) in HV followed by 400oC annealing in air (sample 2). This indicates that, for sample 1, the loss of long range periodicity in crystal structure is mainly due to oxygen vacancies. Moreover, a relatively rough surface with 2 to 5 nm nanoclusters were observed in sample 1 by STM; while sample 2 is too resistive for STM measurements. In addition, Scanning Tunneling Spectroscopy (STS) analysis for sample 1 revealed the bandgap as well as features in the conduction band which may be related to the oxygen vacancies.

  13. Oxygen controlled product formation in CCl{sub 4} dechlorination using zero-valent iron

    SciTech Connect

    Helland, B.R.; Alvarez, P.J.J.; Schnoor, J.L.

    1995-12-01

    Carbon tetrachloride (CCl{sub 4}) was abiotically dechlorinated using zero-valent iron powder (Fe{sup o}) to yield chloroform (CHCl{sub 3}) and methylene chloride (CH{sub 2}Cl{sub 2}), which did not undergo further dechlorination. Dechlorination was rapid and approximated first-order kinetics in the range of concentrations tested (CCl{sub 4}: 1.5 to 5.5 {mu}M; Fe{sup o}: 1 to 10 g per 265 mL distilled deionized water). Initial dechlorination rate coefficients for anoxic batch reactors (0.290 {plus_minus} 0.009 hr{sup -1} for 1 g Fe{sup o}; 1.723 {plus_minus} 0.078 hr{sup -1} for 10 g Fe{sup o}) increased with iron surface area (initially 2.4 {plus_minus} 0.2 m{sup 2}/g). Dechlorination also occurred under oxic conditions, although rates were significantly slower (e.g., 0.085 {plus_minus} 0.041 hr{sup -1} for 1 g Fe{sup o} and 7.4 mg/L initial dissolved oxygen). Rate coefficients increased with time, probably due to an increase in reactive surface area from pitting and dissolution of the iron surface. A rapid pH increase was synchronous to dissolved oxygen consumption, and the pH remained constant after oxygen depletion. This was attributed to the proton and oxygen consuming aerobic corrosion of the Fe{sup o} surface. Recalcitrant CH{sub 2}Cl{sub 2} was decreased in the presence of dissolved oxygen, which reacted with dechlorinated intermediates to yield less environmentally onerous products such as formic acid and carbon monoxide.

  14. Control of oxygen atom chirality and chelate ring conformation by protected/free sugar hydroxyl groups in glucose-pendant dipicolylamine-copper(II) complexes.

    PubMed

    Mikata, Yuji; Sugai, Yuko; Yano, Shigenobu

    2004-08-01

    A pair of copper(II) complexes 1 and 2 exhibit an enantiomeric chiral center at the oxygen atom that coordinates to the metal center. The configurations of the oxygen atom chirality and the chelate ring conformation are simply controlled by protected/free hydroxyl groups of the sugar moiety, yielding mirror image CD spectra. In this system, repulsive and attractive forces are used to regulate chirality on the copper-coordinated oxygen atom both in the solid state and in solution.

  15. Identification and characterization of a nuclear localization signal of TRIM28 that overlaps with the HP1 box.

    PubMed

    Moriyama, Tetsuji; Sangel, Percival; Yamaguchi, Hiroki; Obuse, Chikashi; Miyamoto, Yoichi; Oka, Masahiro; Yoneda, Yoshihiro

    2015-07-01

    Tripartite motif-containing 28 (TRIM28) is a transcription regulator, which forms a repressor complex containing heterochromatin protein 1 (HP1). Here, we report identification of a nuclear localization signal (NLS) within the 462-494 amino acid region of TRIM28 that overlaps with its HP1 binding site, HP1 box. GST-pulldown experiments revealed the interaction of the arginine-rich TRIM28 NLS with various importin α subtypes (α1, α2 and α4). In vitro transport assay demonstrated that nuclear localization of GFP-TRIM28 NLS is mediated by importin αs, in conjunction with importin β1 and Ran. Further, we demonstrated that HP1 and importin αs compete for binding to TRIM28. Together, our findings suggest that importin α has an essential role in the nuclear delivery and preferential HP1 interaction of TRIM28.

  16. A “Pedi” Cures All: Toenail Trimming and the Treatment of Ulcerative Dermatitis in Mice

    PubMed Central

    Adams, Sean C.; Garner, Joseph P.; Felt, Stephen A.; Geronimo, Jerome T.; Chu, David K.

    2016-01-01

    Ulcerative Dermatitis (UD) is the most common cause of unplanned euthanasia in mice used in research, with prevalence rates reported between 4 and 21%. UD is characterized by a deep, ulcerative lesion that appears most commonly over the dorsal neck and is attendant with an intense pruritus. The underlying cause of UD is currently unknown, and as a consequence, there are no directed therapies that resolve lesions reliably. However, there is a growing body of evidence that suggests a behavioral component to the onset, maintenance, and progression of UD lesions. Scratching behavior in response to the intense pruritus associated with UD lesions may be an effective target for interventional therapies. We hypothesized that interfering with scratching behavior by trimming the toenails of mice with UD, would resolve UD lesions. To test this hypothesis, we first evaluated the efficacy of toenail trims with a single application of Vetericyn at the time of treatment versus our previous standard of care, topical Tresaderm applied daily. We found that toenail trims were significantly more effective at resolving lesions (n = 39 toenail trims, n = 100 Tresaderm, p<0.0001) with 93.3% of animals healing by 14 days (median time to lesion resolution). Furthermore, dorsal neck lesions did not recur by 42 days after a single toenail trim (n = 54); however, flank lesions did not resolve and the outcome of the two lesion distributions following treatment were significantly different (p<0.0001). Finally, we implemented toenail trims at an institutional level and found similar efficacies (approximately 90%) for toenail trims regardless of one-time topical supplement used (triple antibiotic ointment, Tresaderm, and Vetericyn, n = 55, 58, 18, p = 0.63). This is the first report of a highly effective treatment for one of the most serious welfare issues in laboratory mice. PMID:26735497

  17. A "Pedi" Cures All: Toenail Trimming and the Treatment of Ulcerative Dermatitis in Mice.

    PubMed

    Adams, Sean C; Garner, Joseph P; Felt, Stephen A; Geronimo, Jerome T; Chu, David K

    2016-01-01

    Ulcerative Dermatitis (UD) is the most common cause of unplanned euthanasia in mice used in research, with prevalence rates reported between 4 and 21%. UD is characterized by a deep, ulcerative lesion that appears most commonly over the dorsal neck and is attendant with an intense pruritus. The underlying cause of UD is currently unknown, and as a consequence, there are no directed therapies that resolve lesions reliably. However, there is a growing body of evidence that suggests a behavioral component to the onset, maintenance, and progression of UD lesions. Scratching behavior in response to the intense pruritus associated with UD lesions may be an effective target for interventional therapies. We hypothesized that interfering with scratching behavior by trimming the toenails of mice with UD, would resolve UD lesions. To test this hypothesis, we first evaluated the efficacy of toenail trims with a single application of Vetericyn at the time of treatment versus our previous standard of care, topical Tresaderm applied daily. We found that toenail trims were significantly more effective at resolving lesions (n = 39 toenail trims, n = 100 Tresaderm, p<0.0001) with 93.3% of animals healing by 14 days (median time to lesion resolution). Furthermore, dorsal neck lesions did not recur by 42 days after a single toenail trim (n = 54); however, flank lesions did not resolve and the outcome of the two lesion distributions following treatment were significantly different (p<0.0001). Finally, we implemented toenail trims at an institutional level and found similar efficacies (approximately 90%) for toenail trims regardless of one-time topical supplement used (triple antibiotic ointment, Tresaderm, and Vetericyn, n = 55, 58, 18, p = 0.63). This is the first report of a highly effective treatment for one of the most serious welfare issues in laboratory mice.

  18. Comparison of regional skeletal muscle tissue oxygenation in college athletes and sedentary control subjects using quantitative BOLD MR imaging.

    PubMed

    Stacy, Mitchel R; Caracciolo, Christopher M; Qiu, Maolin; Pal, Prasanta; Varga, Tyler; Constable, Robert Todd; Sinusas, Albert J

    2016-08-01

    Blood oxygen level-dependent (BOLD) magnetic resonance (MR) imaging permits noninvasive assessment of tissue oxygenation. We hypothesized that BOLD imaging would allow for regional evaluation of differences in skeletal muscle oxygenation between athletes and sedentary control subjects, and dynamic BOLD responses to ischemia (i.e., proximal cuff occlusion) and reactive hyperemia (i.e., rapid cuff deflation) would relate to lower extremity function, as assessed by jumping ability. College football athletes (linemen, defensive backs/wide receivers) were compared to sedentary healthy controls. BOLD signal of the gastrocnemius, soleus, anterior tibialis, and peroneus longus was assessed for peak hyperemic value (PHV), time to peak (TTP), minimum ischemic value (MIV), and time to recovery (TTR). Significantly higher PHVs were identified in athletes versus controls for the gastrocnemius (linemen, 15.8 ± 9.1%; defensive backs/wide receivers, 17.9 ± 5.1%; controls, 7.4 ± 3.5%), soleus (linemen, 25.9 ± 11.5%; backs/receivers, 22.0 ± 9.4%; controls, 12.9 ± 5.8%), and anterior tibialis (linemen, 12.8 ± 5.3%; backs/receivers, 12.6 ± 3.9%; controls, 7.7 ± 4.0%), whereas no differences in PHV were found for the peroneus longus (linemen, 14.1 ± 6.9%; backs/receivers, 11.7 ± 4.6%; controls, 9.0 ± 4.9%). In all subject groups, the gastrocnemius and soleus muscles exhibited the lowest MIVs during cuff occlusion. No differences in TTR were found between muscles for any subject group. PHV of the gastrocnemius muscle was significantly and positively related to maximal vertical (r = 0.56, P = 0.002) and broad jump (r = 0.47, P = 0.01). These results suggest that BOLD MR imaging is a useful noninvasive tool for evaluating differences in tissue oxygenation of specific muscles between active and sedentary individuals, and peak BOLD responses may relate to functional capacity.

  19. Comparison of regional skeletal muscle tissue oxygenation in college athletes and sedentary control subjects using quantitative BOLD MR imaging.

    PubMed

    Stacy, Mitchel R; Caracciolo, Christopher M; Qiu, Maolin; Pal, Prasanta; Varga, Tyler; Constable, Robert Todd; Sinusas, Albert J

    2016-08-01

    Blood oxygen level-dependent (BOLD) magnetic resonance (MR) imaging permits noninvasive assessment of tissue oxygenation. We hypothesized that BOLD imaging would allow for regional evaluation of differences in skeletal muscle oxygenation between athletes and sedentary control subjects, and dynamic BOLD responses to ischemia (i.e., proximal cuff occlusion) and reactive hyperemia (i.e., rapid cuff deflation) would relate to lower extremity function, as assessed by jumping ability. College football athletes (linemen, defensive backs/wide receivers) were compared to sedentary healthy controls. BOLD signal of the gastrocnemius, soleus, anterior tibialis, and peroneus longus was assessed for peak hyperemic value (PHV), time to peak (TTP), minimum ischemic value (MIV), and time to recovery (TTR). Significantly higher PHVs were identified in athletes versus controls for the gastrocnemius (linemen, 15.8 ± 9.1%; defensive backs/wide receivers, 17.9 ± 5.1%; controls, 7.4 ± 3.5%), soleus (linemen, 25.9 ± 11.5%; backs/receivers, 22.0 ± 9.4%; controls, 12.9 ± 5.8%), and anterior tibialis (linemen, 12.8 ± 5.3%; backs/receivers, 12.6 ± 3.9%; controls, 7.7 ± 4.0%), whereas no differences in PHV were found for the peroneus longus (linemen, 14.1 ± 6.9%; backs/receivers, 11.7 ± 4.6%; controls, 9.0 ± 4.9%). In all subject groups, the gastrocnemius and soleus muscles exhibited the lowest MIVs during cuff occlusion. No differences in TTR were found between muscles for any subject group. PHV of the gastrocnemius muscle was significantly and positively related to maximal vertical (r = 0.56, P = 0.002) and broad jump (r = 0.47, P = 0.01). These results suggest that BOLD MR imaging is a useful noninvasive tool for evaluating differences in tissue oxygenation of specific muscles between active and sedentary individuals, and peak BOLD responses may relate to functional capacity. PMID:27535483

  20. Effect of Oxygen and Redox Potential on Glucose Fermentation in Thermotoga maritima under Controlled Physicochemical Conditions

    PubMed Central

    Lakhal, Raja; Auria, Richard; Davidson, Sylvain; Ollivier, Bernard; Dolla, Alain; Hamdi, Moktar; Combet-Blanc, Yannick

    2010-01-01

    Batch cultures of Thermotoga maritima were performed in a bioreactor equipped with instruments adapted for experiments performed at 80°C to mimic the fluctuating oxidative conditions in the hot ecosystems it inhabits. When grown anaerobically on glucose, T. maritima was shown to significantly decrease the redox potential (Eh) of the culture medium down to about −480 mV, as long as glucose was available. Addition of oxygen into T. maritima cultures during the stationary growth phase led to a drastic reduction in glucose consumption rate. However, although oxygen was toxic, our experiment unambiguously proved that T. maritima was able to consume it during a 12-hour exposure period. Furthermore, a shift in glucose metabolism towards lactate production was observed under oxidative conditions. PMID:21461371

  1. Doped LaFeO3 as SOFC Catalysts: Control of Oxygen Mobility Oxidation Activity

    SciTech Connect

    N Lakshminarayanan; J Kuhn; S Rykov; J Millet; U Ozkan; T Rao; J Smedley; E Wang; E Muller; et al.

    2011-12-31

    The bulk structure and surface properties of Fe-based perovskite-type oxides with the formula La{sub 0.6}Sr{sub 0.4}Co{sub y}Fe{sub 1-y}O{sub 3-{delta}} for y = 0.1, 0.2, and 0.3 have been investigated. The properties were found to strongly depend upon Co content, temperature, and environment. The materials were selected due to their potential use as solid oxide fuel cell cathodes. The intermediate Co loading formed oxygen vacancies most easily and several other properties including oxidation activity and surface sites showed a similar non-linear trend. Trends are related to a possible transition in electronic structure. Activity for oxidation of methane, oxygen storage and chemical compatibility was shown to be superior to that of the La{sub 0.6}Sr{sub 0.4}MnO{sub 3}.

  2. The Oxygen Sensor PHD2 Controls Dendritic Spines and Synapses via Modification of Filamin A.

    PubMed

    Segura, Inmaculada; Lange, Christian; Knevels, Ellen; Moskalyuk, Anastasiya; Pulizzi, Rocco; Eelen, Guy; Chaze, Thibault; Tudor, Cicerone; Boulegue, Cyril; Holt, Matthew; Daelemans, Dirk; Matondo, Mariette; Ghesquière, Bart; Giugliano, Michele; Ruiz de Almodovar, Carmen; Dewerchin, Mieke; Carmeliet, Peter

    2016-03-22

    Neuronal function is highly sensitive to changes in oxygen levels, but how hypoxia affects dendritic spine formation and synaptogenesis is unknown. Here we report that hypoxia, chemical inhibition of the oxygen-sensing prolyl hydroxylase domain proteins (PHDs), and silencing of Phd2 induce immature filopodium-like dendritic protrusions, promote spine regression, reduce synaptic density, and decrease the frequency of spontaneous action potentials independently of HIF signaling. We identified the actin cross-linker filamin A (FLNA) as a target of PHD2 mediating these effects. In normoxia, PHD2 hydroxylates the proline residues P2309 and P2316 in FLNA, leading to von Hippel-Lindau (VHL)-mediated ubiquitination and proteasomal degradation. In hypoxia, PHD2 inactivation rapidly upregulates FLNA protein levels because of blockage of its proteasomal degradation. FLNA upregulation induces more immature spines, whereas Flna silencing rescues the immature spine phenotype induced by PHD2 inhibition. PMID:26972007

  3. The Oxygen Sensor PHD2 Controls Dendritic Spines and Synapses via Modification of Filamin A

    PubMed Central

    Segura, Inmaculada; Lange, Christian; Knevels, Ellen; Moskalyuk, Anastasiya; Pulizzi, Rocco; Eelen, Guy; Chaze, Thibault; Tudor, Cicerone; Boulegue, Cyril; Holt, Matthew; Daelemans, Dirk; Matondo, Mariette; Ghesquière, Bart; Giugliano, Michele; Ruiz de Almodovar, Carmen; Dewerchin, Mieke; Carmeliet, Peter

    2016-01-01

    Summary Neuronal function is highly sensitive to changes in oxygen levels, but how hypoxia affects dendritic spine formation and synaptogenesis is unknown. Here we report that hypoxia, chemical inhibition of the oxygen-sensing prolyl hydroxylase domain proteins (PHDs), and silencing of Phd2 induce immature filopodium-like dendritic protrusions, promote spine regression, reduce synaptic density, and decrease the frequency of spontaneous action potentials independently of HIF signaling. We identified the actin cross-linker filamin A (FLNA) as a target of PHD2 mediating these effects. In normoxia, PHD2 hydroxylates the proline residues P2309 and P2316 in FLNA, leading to von Hippel-Lindau (VHL)-mediated ubiquitination and proteasomal degradation. In hypoxia, PHD2 inactivation rapidly upregulates FLNA protein levels because of blockage of its proteasomal degradation. FLNA upregulation induces more immature spines, whereas Flna silencing rescues the immature spine phenotype induced by PHD2 inhibition. PMID:26972007

  4. The use of dissolved oxygen-controlled, fed-batch aerobic cultivation for recombinant protein subunit vaccine manufacturing.

    PubMed

    Farrell, Patrick; Sun, Jacob; Champagne, Paul-Philippe; Lau, Heron; Gao, Meg; Sun, Hong; Zeiser, Arno; D'Amore, Tony

    2015-11-27

    A simple "off-the-shelf" fed-batch approach to aerobic bacterial cultivation for recombinant protein subunit vaccine manufacturing is presented. In this approach, changes in the dissolved oxygen levels are used to adjust the nutrient feed rate (DO-stat), so that the desired dissolved oxygen level is maintained throughout cultivation. This enables high Escherichia coli cell densities and recombinant protein titers. When coupled to a kLa-matched scale-down model, process performance is shown to be consistent at the 2L, 20L, and 200L scales for two recombinant E. coli strains expressing different protein subunit vaccine candidates. Additionally, by mining historical DO-stat nutrient feeding data, a method to transition from DO-stat to a pre-determined feeding profile suitable for larger manufacturing scales without using feedback control is demonstrated at the 2L, 20L, and 200L scales.

  5. Head louse control by suffocation due to blocking their oxygen uptake.

    PubMed

    Al-Quraishy, Saleh; Abdel-Ghaffar, Fathy; Mehlhorn, Heinz

    2015-08-01

    The present study shows that head lice (Pediculus humanus capitis) are killed by suffocation when submersed into the anti-louse shampoo Licener®, which contains a mild shampoo component and an extract of neem seeds after their oil components had been pressed off. It is shown that the inner tracheal system becomes completely filled by the very fluid product. Within 3-10 min, oxygen uptake is prohibited and death of all thus treated lice stages occurred. PMID:25990060

  6. Oxygen consumption and temperature control of premature infants in a double-wall incubator.

    PubMed

    Marks, K H; Lee, C A; Bolan, C D; Maisels, M J

    1981-07-01

    The effects of a double wall in a forced convection-heated incubator were studied on ten naked, nondistressed, premature infants by measuring their mean skin temperature, esophageal temperature, and oxygen consumption when they were in thermal steady state, with, and without, the double wall in place. The incubator air temperature was maintained within the recommended thermoneutral zone during the consecutive paired experiments. Ambient room temperature and relative humidity were constant and the infant's activity (quiet sleep) and postprandial state were the same in both conditions. Together with a significant rise in operative temperature (P less than .05) induced by the double wall (accounted for by a 0.9 C mean increased in incubator wall temperature nearest the baby), their mean skin temperature and esophageal temperatures increased (P less than .025), while a decrease in oxygen consumption occurred in nine of the ten infants (P less than .05). These findings suggest that the double wall reduced radiant and total heat loss from the baby by diminishing the temperature gradient between the skin and incubator surfaces and that metabolic heat production (oxygen consumption) was reduced when the double wall was in place.

  7. Arthroscopic medial meniscus trimming or repair under nerve blocks: Which nerves should be blocked?

    PubMed Central

    Taha, AM; Abd-Elmaksoud, AM

    2016-01-01

    Background: This study aimed to determine the role of the sciatic and obturator nerve blocks (in addition to femoral block) in providing painless arthroscopic medial meniscus trimming/repair. Materials and Methods: One hundred and twenty patients with medial meniscus tear, who had been scheduled to knee arthroscopy, were planned to be included in this controlled prospective double-blind study. The patients were randomly allocated into three equal groups; FSO, FS, and FO. The femoral, sciatic, and obturator nerves were blocked in FSO groups. The femoral and sciatic nerves were blocked in FS group, while the femoral and obturator nerves were blocked in FO group. Intraoperative pain and its causative surgical maneuver were recorded. Results: All the patients (n = 7, 100%) in FO group had intraoperative pain. The research was terminated in this group but completed in FS and FSO groups (40 patients each). During valgus positioning of the knee for surgical management of the medial meniscus tear, the patients in FS group experienced pain more frequently than those in FSO group (P = 0.005). Conclusion: Adding a sciatic nerve block to the femoral nerve block is important for painless knee arthroscopy. Further adding of an obturator nerve block may be needed when a valgus knee position is required to manage the medial meniscus tear. PMID:27375382

  8. Molecular characterization of a CpTRIM35-like protein and its splice variants from whitespotted bamboo shark (Chiloscyllium plagiosum)

    SciTech Connect

    Zhang, Xinshang Zhao, Heng Chen, Yeyu Luo, Huiying Yao, Bin

    2014-10-24

    Highlights: • A TRIM gene and three splice variants were firstly cloned from elasmobranch fish. • The genes were constitutively expressed with high levels in spleen and kidney. • The gene products were distributed in cytoplasm alone or cytoplasm and nucleus. • As E3 ubiquitin ligases, the proteins differed in immune responses to challenges. - Abstract: The tripartite motif (TRIM) proteins play important roles in a broad range of biological processes, including apoptosis, cell proliferation and innate immunity response. In this study, a TRIM gene and its three splice variants were cloned from an elasmobranch fish—whitespotted bamboo shark (Chiloscyllium plagiosum Bennett). Phylogenetic analysis indicated that the gene was closely related to TRIM35 homologs, thus termed CpTRIM35-like. Deduced CpTRIM35 has a RBCC-PRY/SPRY structure typical of TRIM proteins, and its splice variants (CpTRIM35-1–3) have different truncations at the C-terminus. The gene products were constitutively expressed in adult sharks with the highest levels in spleen and kidney. The different subcellular locations, upregulation upon LPS and poly I:C stimulation, and significant E3 ubiquitin ligase activities suggested their different roles in immune responses as an E3 ubiquitin ligase. This is the first TRIM protein ever characterized in elasmobranch fish.

  9. Enhancing dissolved oxygen control using an on-line hybrid fuzzy-neural soft-sensing model-based control system in an anaerobic/anoxic/oxic process.

    PubMed

    Huang, Mingzhi; Wan, Jinquan; Hu, Kang; Ma, Yongwen; Wang, Yan

    2013-12-01

    An on-line hybrid fuzzy-neural soft-sensing model-based control system was developed to optimize dissolved oxygen concentration in a bench-scale anaerobic/anoxic/oxic (A(2)/O) process. In order to improve the performance of the control system, a self-adapted fuzzy c-means clustering algorithm and adaptive network-based fuzzy inference system (ANFIS) models were employed. The proposed control system permits the on-line implementation of every operating strategy of the experimental system. A set of experiments involving variable hydraulic retention time (HRT), influent pH (pH), dissolved oxygen in the aerobic reactor (DO), and mixed-liquid return ratio (r) was carried out. Using the proposed system, the amount of COD in the effluent stabilized at the set-point and below. The improvement was achieved with optimum dissolved oxygen concentration because the performance of the treatment process was optimized using operating rules implemented in real time. The system allows various expert operational approaches to be deployed with the goal of minimizing organic substances in the outlet while using the minimum amount of energy. PMID:24052227

  10. Fungal pretreatment of unsterilized yard trimmings for enhanced methane production by solid-state anaerobic digestion.

    PubMed

    Zhao, Jia; Ge, Xumeng; Vasco-Correa, Juliana; Li, Yebo

    2014-04-01

    Fungal pretreatment is an environmentally friendly process that has been widely studied to improve the digestibility of lignocellulosic biomass. However, sterilization of feedstocks, a costly process, is generally required prior to the fungal pretreatment. In this study, fungal pretreatment of unsterilized yard trimmings using yard trimmings pre-colonized with Ceriporiopsis subvermispora as an inoculum was investigated. Degradation of lignin, cellulose, hemicellulose, and dry matter in yard trimmings during 30 days of fungal pretreatment using different inoculum/substrate ratios (1:19, 1:9 and 1:4) was 14.8-20.2%, 8.1-15.4%, 20.7-27.8%, and 9.8-16.2%, respectively. Methane yields of 34.9-44.6L/kg volatile solids were achieved during solid-state anaerobic digestion (SS-AD) of the pretreated yard trimmings, which were comparable to those obtained by using the traditional method requiring feedstock sterilization. The technology developed in this study can save about 501-789 kJ/kg of dry yard trimmings processed, which is about half of the total biogas energy produced by SS-AD.

  11. TRIM21: a cytosolic Fc receptor with broad antibody isotype specificity

    PubMed Central

    Foss, Stian; Watkinson, Ruth; Sandlie, Inger; James, Leo C; Andersen, Jan Terje

    2015-01-01

    Antibodies are key molecules in the fight against infections. Although previously thought to mediate protection solely in the extracellular environment, recent research has revealed that antibody-mediated protection extends to the cytosolic compartment of cells. This postentry viral defense mechanism requires binding of the antibody to a cytosolic Fc receptor named tripartite motif containing 21 (TRIM21). In contrast to other Fc receptors, TRIM21 shows remarkably broad isotype specificity as it does not only bind IgG but also IgM and IgA. When viral pathogens coated with these antibody isotypes enter the cytosol, TRIM21 is rapidly recruited and efficient neutralization occurs before the virus has had the time to replicate. In addition, inflammatory signaling is induced. As such, TRIM21 acts as a cytosolic sensor that engages antibodies that have failed to protect against infection in the extracellular environment. Here, we summarize our current understanding of how TRIM21 orchestrates humoral immunity in the cytosolic environment. PMID:26497531

  12. Adaptive alpha-trimmed mean filters under deviations from assumed noise model.

    PubMed

    Oten, Remzi; de Figueiredo, Rui J P

    2004-05-01

    Alpha-trimmed mean filters are widely used for the restoration of signals and images corrupted by additive non-Gaussian noise. They are especially preferred if the underlying noise deviates from Gaussian with the impulsive noise components. The key design issue of these filters is to select its only parameter, alpha, optimally for a given noise type. In image restoration, adaptive filters utilize the flexibility of selecting alpha according to some local noise statistics. In the present paper, we first review the existing adaptive alpha-trimmed mean filter schemes. We then analyze the performance of these filters when the underlying noise distribution deviates from the Gaussian and does not satisfy the assumptions such as symmetry. Specifically, the clipping effect and the mixed noise cases are analyzed. We also present a new adaptive alpha-trimmed filter implementation that detects the nonsymmetry points locally and applies alpha-trimmed mean filter that trims out the outlier pixels such as edges or impulsive noise according to this local decision. Comparisons of the speed and filtering performances under deviations from symmetry and Gaussian assumptions show that the proposed filter is a very good alternative to the existing schemes. PMID:15376595

  13. Hyperbaric Oxygen in Lower Limb Trauma (HOLLT); protocol for a randomised controlled trial

    PubMed Central

    Millar, Ian L; McGinnes, Rosemary A; Williamson, Owen; Lind, Folke; Jansson, Karl-Åke; Hajek, Michal; Smart, David; Fernandes, Tiago; Miller, Russell; Myles, Paul; Cameron, Peter

    2015-01-01

    Introduction Open fractures with significant soft tissue injury are associated with high rates of complications, such as non-union, infection, chronic pain and disability. Complications often require further inpatient care, and in many cases, multiple operations and prolonged rehabilitation. Use of hyperbaric oxygen therapy as an adjunct to standard orthopaedic trauma care has the potential to reduce the complications of musculoskeletal injury and thus improve outcomes. Two previous randomised trials have suggested some positive effect, but neither functional measures nor long-term outcomes were reported. Methods and analysis An international, multicentre, randomised, open-label, clinical trial. Patients with trauma with an acute open fracture of the tibia with severe soft tissue injury (Gustilo grade 3) and high risk of injury-related complications were recruited from participating major trauma hospitals with hyperbaric facilities. Patients were enrolled with the expectation of commencing 12 sessions of hyperbaric oxygen therapy within 48 h of injury. The primary outcome measure is the incidence of acute complications of the open fracture wound at 14 days. Other short-term outcome measures include amputation, need for fasciotomy, time until wound closure, breakdown of closed wounds, time until definitive orthopaedic fixation, number of operative procedures, intensive care stay and hospital stay. Long-term follow-up will continue for 2 years postinjury. Ethics and dissemination Ethics approval was given by The Alfred Health Human Ethics Committee (206/04) and the Monash University Human Research Ethics Committee (CF07/4208). Approval was also obtained from the institutional research ethics committee at each participating site. This study will make a significant contribution to the trauma literature and should answer the question of whether hyperbaric oxygen therapy can significantly improve outcomes in severe lower limb trauma. Collective study results will

  14. Autonomic control of cardiac function and myocardial oxygen consumption during hypoxic hypoxia.

    NASA Technical Reports Server (NTRS)

    Erickson, H. H.; Stone, H. L.

    1972-01-01

    Investigation in 19 conscious dogs of the importance of the sympathetic nervous system in the coronary and cardiac response to altitude (hypoxic) hypoxia. Beta-adrenergic blockade was used to minimize the cardiac effect associated with sympathetic receptors. It is shown that the autonomic nervous system, and particularly the sympathetic nervous system, is responsible for the increase in ventricular function and myocardial oxygen consumption that occurs during hypoxia. Minimizing this response through appropriate conditioning and training may improve the operating efficiency of the heart and reduce the hazard of hypoxia and other environmental stresses, such as acceleration, which are encountered in advanced aircraft systems.

  15. Control of Oxygen Delamination in Solid Oxide Electrolyzer Cells via Modifying Operational Regime

    SciTech Connect

    Sergey N. Rashkeev; Michael V. Glazoff

    2011-10-01

    Possible modifications of operational regimes for solid oxide fuel cell (SOEC) devices for hydrogen production are discussed. It is shown that applying alternating current (AC) voltage pulses at a certain frequency range to SOECs could reduce oxygen delamination degradation in these devices and significantly increase their lifetime. This operational scheme provides wide possibilities to increase longevity of SOEC devices required for their use in commercial hydrogen production processes, without any significant modification of used materials and/or cell design. Developed simulation method possesses a broad generality and be employed in a number of other industrial processes.

  16. Flammability control in the oxygen environment of the Apollo guidance and navigation equipment

    NASA Technical Reports Server (NTRS)

    Holley, M. D.; Bachman, S.

    1971-01-01

    The Apollo guidance and navigation (G&N) equipment test program, the redesign philosophy, and the actual equipment modifications that were used to limit burn rates in an environment of 100 percent oxygen at pressures of 6.2 and 16 psia are described. The major approach was a serious basic review of the real function of the nonmetallic materials of concern. The result of this review was that the materials could be replaced, eliminated, or covered by nonflammable metallic materials. Although several low-flammability nonmetallic materials were investigated, the direct approach of cover, eliminate, or replace generally proved to be quicker and more effective.

  17. Metal–insulator transition of valence-controlled VO2 thin film prepared by RF magnetron sputtering using oxygen radical

    NASA Astrophysics Data System (ADS)

    Suetsugu, Takaaki; Shimazu, Yuichi; Tsuchiya, Takashi; Kobayashi, Masaki; Minohara, Makoto; Sakai, Enju; Horiba, Koji; Kumigashira, Hiroshi; Higuchi, Tohru

    2016-06-01

    We have prepared b-axis-oriented VO2 thin films by RF magnetron sputtering using oxygen radicals as the reactive gas. The VO2 thin films consist of a mixed-valence V3+/V4+ state formed by oxygen vacancies. The V3+ ratio strongly depends on the film thickness and the oxygen partial pressure of the radical gun during deposition. The lattice constant of the b-axis increases and the metal–insulator transition (MIT) temperature decreases with decreasing V3+ ratio, although the VO2 thin films with a high V3+ ratio of 42% do not exhibit MIT. The bandwidths and spectral weights of V 3d a1g and \\text{e}\\text{g}σ bands at around the Fermi level, which correspond to the insulating phase at 300 K, are smaller in the VO2 thin films with a low V3+ ratio. These results indicate that the control of the mixed-valence V3+/V4+ state is important for the MIT of b-axis-oriented VO2 thin films.

  18. Metal-insulator transition of valence-controlled VO2 thin film prepared by RF magnetron sputtering using oxygen radical

    NASA Astrophysics Data System (ADS)

    Suetsugu, Takaaki; Shimazu, Yuichi; Tsuchiya, Takashi; Kobayashi, Masaki; Minohara, Makoto; Sakai, Enju; Horiba, Koji; Kumigashira, Hiroshi; Higuchi, Tohru

    2016-06-01

    We have prepared b-axis-oriented VO2 thin films by RF magnetron sputtering using oxygen radicals as the reactive gas. The VO2 thin films consist of a mixed-valence V3+/V4+ state formed by oxygen vacancies. The V3+ ratio strongly depends on the film thickness and the oxygen partial pressure of the radical gun during deposition. The lattice constant of the b-axis increases and the metal-insulator transition (MIT) temperature decreases with decreasing V3+ ratio, although the VO2 thin films with a high V3+ ratio of 42% do not exhibit MIT. The bandwidths and spectral weights of V 3d a1g and \\text{e}\\text{g}σ bands at around the Fermi level, which correspond to the insulating phase at 300 K, are smaller in the VO2 thin films with a low V3+ ratio. These results indicate that the control of the mixed-valence V3+/V4+ state is important for the MIT of b-axis-oriented VO2 thin films.

  19. Controlling the oxygen potential to improve the densification and the solid solution formation of uranium-plutonium mixed oxides

    NASA Astrophysics Data System (ADS)

    Berzati, Ségolène; Vaudez, Stéphane; Belin, Renaud C.; Léchelle, Jacques; Marc, Yves; Richaud, Jean-Christophe; Heintz, Jean-Marc

    2014-04-01

    Diffusion mechanisms occurring during the sintering of oxide ceramics are affected by the oxygen content of the atmosphere, as it imposes the nature and the concentration of structural defects in the material. Thus, the oxygen partial pressure, p(O2), of the sintering gas has to be precisely controlled, otherwise a large dispersion in various parameters, critical for the manufacturing of ceramics such as nuclear oxides fuels, is likely to occur. In the present work, the densification behaviour and the solid solution formation of a mixed uranium-plutonium oxide (MOX) were investigated. The initial mixture, composed of 70% UO2 + 30% PuO2, was studied at p(O2) ranging from 10-15 to 10-4 atm up to 1873 K both with dilatometry and in situ high temperature X-ray diffraction. This study has shown that the initial oxides UO2+x and PuO2-x first densify during heating and then the solid solution formation starts at about 200 K higher. The densification and the formation of the solid solution both occur at a lower temperature when p(O2) increases. Based on this result, it is possible to better define the sintering atmosphere, eventually leading to optimized parameters such as density, oxygen stoichiometry and cations homogenization of nuclear ceramics and of a wide range of industrial ceramic materials.

  20. Evaluation of Thermal Control Coatings and Polymeric Materials Exposed to Ground Simulated Atomic Oxygen and Vacuum Ultraviolet Radiation

    NASA Technical Reports Server (NTRS)

    Kamenetzky, R. R.; Vaughn, J. A.; Finckenor, M. M.; Linton, R. C.

    1995-01-01

    Numerous thermal control and polymeric samples with potential International Space Station applications were evaluated for atomic oxygen and vacuum ultraviolet radiation effects in the Princeton Plasma Physics Laboratory 5 eV Neutral Atomic Oxygen Facility and in the MSFC Atomic Oxygen Drift Tube System. Included in this study were samples of various anodized aluminum samples, ceramic paints, polymeric materials, and beta cloth, a Teflon-impregnated fiberglass cloth. Aluminum anodizations tested were black duranodic, chromic acid anodize, and sulfuric acid anodize. Paint samples consisted of an inorganic glassy black paint and Z-93 white paint made with the original PS7 binder and the new K2130 binder. Polymeric samples evaluated included bulk Halar, bulk PEEK, and silverized FEP Teflon. Aluminized and nonaluminized Chemfab 250 beta cloth were also exposed. Samples were evaluated for changes in mass, thickness, solar absorptance, and infrared emittance. In addition to material effects, an investigation was made comparing diffuse reflectance/solar absorptance measurements made using a Beckman DK2 spectroreflectometer and like measurements made using an AZ Technology-developed laboratory portable spectroreflectometer.

  1. Toll-like receptor 3 stimulation promotes Ro52/TRIM21 synthesis and nuclear redistribution in salivary gland epithelial cells, partially via type I interferon pathway

    PubMed Central

    Kyriakidis, N C; Kapsogeorgou, E K; Gourzi, V C; Konsta, O D; Baltatzis, G E; Tzioufas, A G

    2014-01-01

    Up-regulated expression of Ro52/tripartite motif-containing protein 21 (TRIM21), Ro60/TROVE domain family, member 2 (TROVE2) and lupus LA protein/Sjögren's syndrome antigen B (La/SSB) autoantigens has been described in the salivary gland epithelial cells (SGEC) of patients with Sjögren's syndrome (SS). SGECs, the key regulators of autoimmune SS responses, express high levels of surface functional Toll-like receptor (TLR)-3, whereas Ro52/TRIM21 negatively regulates TLR-3-mediated inflammation. Herein, we investigated the effect of TLR-3-signalling on the expression of Ro52/TRIM21, as well as Ro60/TROVE2 and La/SSB autoantigens, by SGECs. The effect of TLR-3 or TLR-4 stimulation on autoantigen expression was evaluated by polyI:C or lipopolysaccharide (LPS) treatment, respectively, of SGEC lines (10 from SS patients, 12 from non-SS controls) or HeLa cells, followed by analysis of mRNA and protein expression. PolyI:C, but not LPS, resulted in a two-step induction of Ro52/TRIM21 mRNA expression by SGECs, a 12-fold increment at 6 h followed by a 2·5-fold increment at 24–48 h, whereas it induced a late two-fold up-regulation of Ro60/TROVE2 and La/SSB mRNAs at 48 h. Although protein expression levels were not affected significantly, the late up-regulation of Ro52/TRIM21 mRNA was accompanied by protein redistribution, from nucleolar-like pattern to multiple coarse dots spanning throughout the nucleus. These late phenomena were mediated significantly by interferon (IFN)-β production, as attested by cognate secretion and specific inhibition experiments and associated with IFN regulatory factor (IRF)3 degradation. TLR-3-signalling had similar effects on SGECs obtained from SS patients and controls, whereas it did not affect the expression of these autoantigens in HeLa cells. TLR-3 signalling regulates the expression of autoantigens by SGECs, implicating innate immunity pathways in their over-expression in inflamed tissues and possibly in their exposure to the immune

  2. Comparison of water wash, trimming, and combined hot water and lactic acid treatments for reducing bacteria of fecal origin on beef carcasses.

    PubMed

    Castillo, A; Lucia, L M; Goodson, K J; Savell, J W; Acuff, G R

    1998-07-01

    Cleaning treatments, such as high-pressure water wash at 35 degrees C or trim, alone and combined with sanitizing treatments, such as hot water (95 degrees C at the source), warm (55 degrees C) 2% lactic acid spray, and combinations of these two sanitizing methods, were compared for their effectiveness in reducing inoculated numbers (5.0 to 6.0 log CFU/cm2) of Salmonella typhimurium, Escherichia coli O157:H7, aerobic plate counts, Enterobacteriaceae, total coliforms, thermotolerant coliforms, and generic E. coli on hot beef carcass surface areas in a model carcass spray cabinet. Log reductions in numbers of all tested organisms by water wash or trim alone were significantly smaller than the log reductions obtained by the different combined treatments. Regardless of the cleaning treatment (water wash or trim) or surface area, the range for mean log reductions by hot water was from 4.0 to > 4.8 log CFU/cm2, by lactic acid spray was from 4.6 to > 4.9 log CFU/cm2, by hot water followed by lactic acid spray was from 4.5 to > 4.9 log CFU/cm2, and by lactic acid spray followed by hot water was from 4.4 to > 4.6 log CFU/cm2, for S. typhimurium and E. coli O157:H7. Identical reductions were obtained for thermotolerant coliforms and generic E. coli. No differences in bacterial reductions were observed for different carcass surface regions. Water wash and trim treatments caused spreading of the contamination to other areas of the carcass surface while providing an overall reduction in fecal or pathogenic contamination on carcass surface areas. This relocated contamination after either water wash or trim was most effectively reduced by following with hot water and then lactic acid spray. This combined treatment yielded 0% positive samples for S. typhimurium, E. coli O157:H7, thermotolerant coliforms, and generic E. coli on areas outside the inoculated areas, whereas percent positive samples after applying other combined treatments ranged from 22 to 44% for S. typhimurium, 0 to

  3. Resuscitation of very preterm infants with 30% vs. 65% oxygen at birth: study protocol for a randomized controlled trial

    PubMed Central

    2012-01-01

    Background Resuscitation at birth with 100% oxygen is known to increase the oxidative burden with concomitant deleterious effects. Although fractions of inspired oxygen (FiO2) < 100% are widely used in preterm infants, starting resuscitation at a (too) low FiO2 may result in hypoxia. The objective of this study is to compare the safety and efficacy of resuscitating very preterm infants with an initial FiO2 of 30% versus 65%. Methods/design In this double-blind, randomized controlled trial, 200 very preterm infants with a gestational age < 32 weeks will be randomized to start resuscitation after birth with either 30% or 65% oxygen. The FiO2 will be adjusted based on oxygen saturation measured by pulse oximetry (SpO2) and pulse rate (which should be over 100 beats per minute) in order to achieve a target SpO2 of 88–94% at 10 min of life. The FiO2 and pulse oximetry data will be continuously recorded. The primary outcome is survival without bronchopulmonary dysplasia, as assessed by a physiological test at 36 weeks postmenstrual age. The secondary outcomes include the time to achieve SpO2 > 88%, Apgar score at 5 min, cumulative O2 exposure, oxidative stress (as determined by glutathione synthesis and oxidative stress markers), retinopathy of prematurity, brain injury and neurodevelopmental outcome at 2 years of age. This study will provide insight into determining the appropriate initial FiO2 to start resuscitation of very preterm infants. Trial registration http://www.trialregister.nl, NTR243. PMID:22621326

  4. The effect of routine hoof trimming on locomotion score, ruminating time, activity, and milk yield of dairy cows.

    PubMed

    Van Hertem, T; Parmet, Y; Steensels, M; Maltz, E; Antler, A; Schlageter-Tello, A A; Lokhorst, C; Romanini, C E B; Viazzi, S; Bahr, C; Berckmans, D; Halachmi, I

    2014-01-01

    The objective of this study was to quantify the effect of hoof trimming on cow behavior (ruminating time, activity, and locomotion score) and performance (milk yield) over time. Data were gathered from a commercial dairy farm in Israel where routine hoof trimming is done by a trained hoof trimmer twice per year on the entire herd. In total, 288 cows spread over 6 groups with varying production levels were used for the analysis. Cow behavior was measured continuously with a commercial neck activity logger and a ruminating time logger (HR-Tag, SCR Engineers Ltd., Netanya, Israel). Milk yield was recorded during each milking session with a commercial milk flow sensor (Free Flow, SCR Engineers Ltd.). A trained observer assigned on the spot 5-point locomotion scores during 19 nighttime milking occasions between 22 October 2012 and 4 February 2013. Behavioral and performance data were gathered from 1wk before hoof trimming until 1wk after hoof trimming. A generalized linear mixed model was used to statistically test all main and interactive effects of hoof trimming, parity, lactation stage, and hoof lesion presence on ruminating time, neck activity, milk yield, and locomotion score. The results on locomotion scores show that the proportional distribution of cows in the different locomotion score classes changes significantly after trimming. The proportion of cows with a locomotion score ≥3 increases from 14% before to 34% directly after the hoof trimming. Two months after the trimming, the number of cows with a locomotion score ≥3 reduced to 20%, which was still higher than the baseline values 2wk before the trimming. The neck activity level was significantly reduced 1d after trimming (380±6 bits/d) compared with before trimming (389±6 bits/d). Each one-unit increase in locomotion score reduced cow activity level by 4.488 bits/d. The effect of hoof trimming on ruminating time was affected by an interaction effect with parity. The effect of hoof trimming on

  5. Characterisation of a cluster of TRIM-B30.2 genes in the chicken MHC B locus.

    PubMed

    Ruby, Thomas; Bed'Hom, Bertrand; Wittzell, Hakan; Morin, Véronique; Oudin, Anne; Zoorob, Rima

    2005-04-01

    We have identified and characterised a cluster of six TRIM-B30.2 genes flanking the chicken BF/BL region of the B complex. The TRIM-B30.2 proteins are a subgroup of the TRIM protein family containing the tripartite motif (TRIM), consisting of a RING domain, a B-box and a coiled coil region, and a B30.2-like domain. In humans, a cluster of seven TRIM-B30.2 genes has been characterised within the MHC on Chromosome 6p21.33. Among the six chicken TRIM-B30.2 genes two are orthologous to those of the human MHC, and two (TRIM41 and TRIM7) are orthologous to human genes located on Chromosome 5. In humans, these last two genes are adjacent to GNB2L1, a guanine nucleotide-binding protein gene, the ortholog of the chicken c12.3 gene situated in the vicinity of the TRIM-B30.2 genes. This suggests that breakpoints specific to mammals have occurred and led to the remodelling of their MHC structure. In terms of structure, like their mammalian counterparts, each chicken gene consists of five coding exons; exon 1 encodes the RING domain and the B-box, exons 2, 3 and 4 form the coiled-coil region, and the last exon represents the B30.2-like domain. Phylogenetic analysis led us to assume that this extended BF/BL region may be similar to the human extended class I region, because it contains a cluster of BG genes sharing an Ig-V like domain with the BTN genes (Henry et al. 1997a) and six TRIM-B30.2 genes containing the B30.2-like domain, shared with the TRIM-B30.2 members and the BTN genes.

  6. Multi-pollutant treatment of crystalline cellulosic effluent: Function of dissolved oxygen on process control.

    PubMed

    Shanthi Sravan, J; Naresh Kumar, A; Venkata Mohan, S

    2016-10-01

    Treatment of crystalline cellulose based wastewater was carried out in periodic discontinuous batch reactor (PDBR). Specific influence of dissolved oxygen on treatment of crystalline cellulosic (CC) wastewater was evaluated in three different microenvironments such as aerobic, anoxic and anaerobic. PDBR-aerobic biosystem documented relatively higher substrate degradation [2.63kgCOD/m(3)-day (92%)] in comparison to PDBR-anoxic [2.12kgCOD/m(3)-day (71%)] and PDBR-anaerobic [1.81kgCOD/m(3)-day (63%)], which is in accordance with the observed DO levels. Similarly, multipollutants viz., phosphates and nitrates removal was observed to be higher in aerobic followed by anoxic and anaerobic operations. Higher nitrate removal in aerobic operation might be attributed to the efficient denitrification carried out by the biocatalyst, which utilizes both nitrates and oxygen as oxidizing agents. Multiscan spectral profiles depicted reduction in color intensity in all three microenvironments that correlated with the substrate degradation observed. Despite the high organic load, PDBR functioned well without exhibiting process inhibition. PMID:27005787

  7. In situ surface characterization and oxygen reduction reaction on shape-controlled gold nanoparticles.

    PubMed

    Hernández, J; Solla-Gullón, J; Herrero, E; Feliu, J M; Aldaz, A

    2009-04-01

    Gold nanoparticles of different shapes/surface structures were synthesized and electrochemically characterized. An in-situ surface characterization of the Au nanoparticles, which was able to obtain qualitative information about the type and relative sizes of the different facets present in the surface of the Au nanoparticles, was carried out by using Pb Under Potential Deposition (UPD) in alkaline solutions as a surface sensitive tool. The results obtained show that the final atomic arrangement on the surface can be different from that expected from the bulk structure of the well-defined shape Au nanoparticles. In this way, the development of precise in-situ methods to measure the distribution of the different sites on the nanoparticle surface, as lead UPD on gold surfaces, is highlighted. Oxygen Reduction Reaction (ORR) was performed on the different Au nanoparticles. In agreement with the particular sensitivity of the oxygen reduction to the presence of Au(100) surface domains, cubic Au nanoparticles show much better electrocatalytic activity for ORR than small spherical particles and long nanorods, in agreement with the presence of a great fraction of (100) terrace sites on the surface of cubic gold nanoparticles. PMID:19437963

  8. Multi-pollutant treatment of crystalline cellulosic effluent: Function of dissolved oxygen on process control.

    PubMed

    Shanthi Sravan, J; Naresh Kumar, A; Venkata Mohan, S

    2016-10-01

    Treatment of crystalline cellulose based wastewater was carried out in periodic discontinuous batch reactor (PDBR). Specific influence of dissolved oxygen on treatment of crystalline cellulosic (CC) wastewater was evaluated in three different microenvironments such as aerobic, anoxic and anaerobic. PDBR-aerobic biosystem documented relatively higher substrate degradation [2.63kgCOD/m(3)-day (92%)] in comparison to PDBR-anoxic [2.12kgCOD/m(3)-day (71%)] and PDBR-anaerobic [1.81kgCOD/m(3)-day (63%)], which is in accordance with the observed DO levels. Similarly, multipollutants viz., phosphates and nitrates removal was observed to be higher in aerobic followed by anoxic and anaerobic operations. Higher nitrate removal in aerobic operation might be attributed to the efficient denitrification carried out by the biocatalyst, which utilizes both nitrates and oxygen as oxidizing agents. Multiscan spectral profiles depicted reduction in color intensity in all three microenvironments that correlated with the substrate degradation observed. Despite the high organic load, PDBR functioned well without exhibiting process inhibition.

  9. Osteitis of the apex of the third phalanx following foot trimming in a dairy cow.

    PubMed

    Thompson, P N

    1998-03-01

    An adult Ayrshire cow was presented with bilateral hind-limb lameness 5 weeks after routine claw trimming. Examination under intravenous regional anaesthesia revealed ulceration of the sole at the toe of both the right lateral and left medial claws of the hind limbs. Radiographic examination showed osteolysis and pathological fractures of the 3rd phalanx of both affected claws. Wooden blocks were fixed to the 2 healthy claws and the bone fragments were removed using a different technique for each claw. Full recovery followed within 11 weeks. The aetiological factors and treatment options for this condition, which was considered to be caused primarily by incorrect claw trimming, are discussed. PMID:9646258

  10. Control of voluntary feed intake in fish: a role for dietary oxygen demand in Nile tilapia (Oreochromis niloticus) fed diets with different macronutrient profiles.

    PubMed

    Saravanan, S; Geurden, I; Figueiredo-Silva, A C; Kaushik, S J; Haidar, M N; Verreth, J A J; Schrama, J W

    2012-10-28

    It has been hypothesised that, at non-limiting water oxygen conditions, voluntary feed intake (FI) in fish is limited by the maximal physiological capacity of oxygen use (i.e. an 'oxystatic control of FI in fish'). This implies that fish will adjust FI when fed diets differing in oxygen demand, resulting in identical oxygen consumption. Therefore, FI, digestible energy (DE) intake, energy balance and oxygen consumption were monitored at non-limiting water oxygen conditions in Nile tilapia fed diets with contrasting macronutrient composition. Diets were formulated in a 2 × 2 factorial design in order to create contrasts in oxygen demand: two ratios of digestible protein (DP):DE ('high' v. 'low'); and a contrast in the type of non-protein energy source ('starch' v. 'fat'). Triplicate groups of tilapia were fed each diet twice daily to satiation for 48 d. FI (g DM/kg(0·8) per d) was significantly lower (9·5%) in tilapia fed the starch diets relative to the fat diets. The DP:DE ratio affected DE intakes (P < 0·05), being 11% lower with 'high' than with 'low' DP:DE ratio diets, which was in line with the 11·9% higher oxygen demand of these diets. Indeed, DE intakes of fish showed an inverse linear relationship with dietary oxygen demand (DOD; R 2 0·81, P < 0·001). As hypothesised ('oxystatic' theory), oxygen consumption of fish was identical among three out of the four diets. Altogether, these results demonstrate the involvement of metabolic oxygen use and DOD in the control of FI in tilapia.

  11. Orientation-Controlled Electrocatalytic Efficiency of an Adsorbed Oxygen-Tolerant Hydrogenase.

    PubMed

    Heidary, Nina; Utesch, Tillmann; Zerball, Maximilian; Horch, Marius; Millo, Diego; Fritsch, Johannes; Lenz, Oliver; von Klitzing, Regine; Hildebrandt, Peter; Fischer, Anna; Mroginski, Maria Andrea; Zebger, Ingo

    2015-01-01

    Protein immobilization on electrodes is a key concept in exploiting enzymatic processes for bioelectronic devices. For optimum performance, an in-depth understanding of the enzyme-surface interactions is required. Here, we introduce an integral approach of experimental and theoretical methods that provides detailed insights into the adsorption of an oxygen-tolerant [NiFe] hydrogenase on a biocompatible gold electrode. Using atomic force microscopy, ellipsometry, surface-enhanced IR spectroscopy, and protein film voltammetry, we explore enzyme coverage, integrity, and activity, thereby probing both structure and catalytic H2 conversion of the enzyme. Electrocatalytic efficiencies can be correlated with the mode of protein adsorption on the electrode as estimated theoretically by molecular dynamics simulations. Our results reveal that pre-activation at low potentials results in increased current densities, which can be rationalized in terms of a potential-induced re-orientation of the immobilized enzyme. PMID:26580976

  12. Orientation-Controlled Electrocatalytic Efficiency of an Adsorbed Oxygen-Tolerant Hydrogenase

    PubMed Central

    Zerball, Maximilian; Horch, Marius; Millo, Diego; Fritsch, Johannes; Lenz, Oliver; von Klitzing, Regine; Hildebrandt, Peter; Fischer, Anna; Mroginski, Maria Andrea; Zebger, Ingo

    2015-01-01

    Protein immobilization on electrodes is a key concept in exploiting enzymatic processes for bioelectronic devices. For optimum performance, an in-depth understanding of the enzyme-surface interactions is required. Here, we introduce an integral approach of experimental and theoretical methods that provides detailed insights into the adsorption of an oxygen-tolerant [NiFe] hydrogenase on a biocompatible gold electrode. Using atomic force microscopy, ellipsometry, surface-enhanced IR spectroscopy, and protein film voltammetry, we explore enzyme coverage, integrity, and activity, thereby probing both structure and catalytic H2 conversion of the enzyme. Electrocatalytic efficiencies can be correlated with the mode of protein adsorption on the electrode as estimated theoretically by molecular dynamics simulations. Our results reveal that pre-activation at low potentials results in increased current densities, which can be rationalized in terms of a potential-induced re-orientation of the immobilized enzyme. PMID:26580976

  13. Mult-Pollutant Control Through Novel Approaches to Oxygen Enhanced Combustion

    SciTech Connect

    Richard Axelbaum; Pratim Biswas

    2009-02-28

    Growing concerns about global climate change have focused effortss on identifying approaches to stabilizing carbon dioxide levels in the atmosphere. One approach utilizes oxy-fuel combustion to produce a concentrated flue gas that will enable economical CO{sub 2} capture by direct methods. Oxy-fuel combustion rewuires an Air Separation Unit (ASU) to provide a high-purity stream of oxygen as well as a Compression and Purification Unit (CPU) to clean and compress the CO{sub 2} for long term storage. Overall plant efficiency will suffer from the parasitic load of both the ASU and CPU and researchers are investigating techniques to enhance other aspects of the combustion and gas cleanup proceses to improve the benefit-to-cost ratio. This work examines the influence of oxy-fuel combustion and non-carbon based sorbents on the formation and fate of multiple combustion pollutants both numerically and experimentally.

  14. Temperature controls oxidative phosphorylation and reactive oxygen species production through uncoupling in rat skeletal muscle mitochondria.

    PubMed

    Jarmuszkiewicz, Wieslawa; Woyda-Ploszczyca, Andrzej; Koziel, Agnieszka; Majerczak, Joanna; Zoladz, Jerzy A

    2015-06-01

    Mitochondrial respiratory and phosphorylation activities, mitochondrial uncoupling, and hydrogen peroxide formation were studied in isolated rat skeletal muscle mitochondria during experimentally induced hypothermia (25 °C) and hyperthermia (42 °C) compared to the physiological temperature of resting muscle (35 °C). For nonphosphorylating mitochondria, increasing the temperature from 25 to 42 °C led to a decrease in membrane potential, hydrogen peroxide production, and quinone reduction levels. For phosphorylating mitochondria, no temperature-dependent changes in these mitochondrial functions were observed. However, the efficiency of oxidative phosphorylation decreased, whereas the oxidation and phosphorylation rates and oxidative capacities of the mitochondria increased, with increasing assay temperature. An increase in proton leak, including uncoupling protein-mediated proton leak, was observed with increasing assay temperature, which could explain the reduced oxidative phosphorylation efficiency and reactive oxygen species production.

  15. Oxygen-Dependent Control of Respiratory Nitrate Reduction in Mycelium of Streptomyces coelicolor A3(2)

    PubMed Central

    Fischer, Marco; Falke, Dörte; Pawlik, Tony

    2014-01-01

    Several members of the obligately aerobic genus Streptomyces are able to reduce nitrate, catalyzed by Nar-type respiratory nitrate reductases. A unique feature of Streptomyces coelicolor A3(2) compared with other streptomycetes is that it synthesizes three nonredundant Nar enzymes. In this study, we show that Nar2 is the main Nar enzyme active in mycelium and could characterize the conditions governing its synthesis. Nar2 was present at low levels in aerobically cultivated mycelium, but synthesis was induced when cultures were grown under oxygen limitation. Growth in the presence of high oxygen concentrations prevented the induction of Nar2 synthesis. Equally, an abrupt shift from aerobiosis to anaerobiosis did not result in the immediate induction of Nar2 synthesis. This suggests that the synthesis of Nar2 is induced during a hypoxic downshift, probably to allow maintenance of a proton gradient during the transition to anaerobiosis. Although no Nar2 could be detected in freshly harvested mature spores, synthesis of the enzyme could be induced after long-term (several days) incubation of these resting spores under anaerobic conditions. Induction of Nar2 synthesis in spores was linked to transcriptional control. Nar2 activity in whole mycelium was strictly dependent on the presence of a putative nitrate transporter, NarK2. The oxygen-dependent inhibition of nitrate reduction by Nar2 was mediated by NarK2-dependent nitrate:nitrite antiport. This antiport mechanism likely prevents the accumulation of toxic nitrite in the cytoplasm. A deletion of the narK2 gene had no effect on Nar1-dependent nitrate reduction in resting spores. Together, our results indicate redox-dependent transcriptional and posttranslational control of nitrate reduction by Nar2. PMID:25225271

  16. Improvement of the analysis of the biochemical oxygen demand (BOD) of Mediterranean seawater by seeding control.

    PubMed

    Simon, F Xavier; Penru, Ywann; Guastalli, Andrea R; Llorens, Joan; Baig, Sylvie

    2011-07-15

    Biochemical oxygen demand (BOD) is a useful parameter for assessing the biodegradability of dissolved organic matter in water. At the same time, this parameter is used to evaluate the efficiency with which certain processes remove biodegradable natural organic matter (NOM). However, the values of BOD in seawater are very low (around 2 mgO(2)L(-1)) and the methods used for its analysis are poorly developed. The increasing attention given to seawater desalination in the Mediterranean environment, and related phenomena such as reverse osmosis membrane biofouling, have stimulated interest in seawater BOD close to the Spanish coast. In this study the BOD analysis protocol was refined by introduction of a new step in which a critical quantity of autochthonous microorganisms, measured as adenosine triphosphate, is added. For the samples analyzed, this improvement allowed us to obtain reliable and replicable BOD measurements, standardized with solutions of glucose-glutamic acid and acetate. After 7 days of analysis duration, more than 80% of ultimate BOD is achieved, which in the case of easily biodegradable compounds represents nearly a 60% of the theoretical oxygen demand. BOD(7) obtained from the Mediterranean Sea found to be 2.0±0.3 mgO(2)L(-1) but this value decreased with seawater storage time due to the rapid consumption of labile compounds. No significant differences were found between two samples points located on the Spanish coast, since their organic matter content was similar. Finally, the determination of seawater BOD without the use of inoculum may lead to an underestimation of BOD.

  17. Improvement of the analysis of the biochemical oxygen demand (BOD) of Mediterranean seawater by seeding control.

    PubMed

    Simon, F Xavier; Penru, Ywann; Guastalli, Andrea R; Llorens, Joan; Baig, Sylvie

    2011-07-15

    Biochemical oxygen demand (BOD) is a useful parameter for assessing the biodegradability of dissolved organic matter in water. At the same time, this parameter is used to evaluate the efficiency with which certain processes remove biodegradable natural organic matter (NOM). However, the values of BOD in seawater are very low (around 2 mgO(2)L(-1)) and the methods used for its analysis are poorly developed. The increasing attention given to seawater desalination in the Mediterranean environment, and related phenomena such as reverse osmosis membrane biofouling, have stimulated interest in seawater BOD close to the Spanish coast. In this study the BOD analysis protocol was refined by introduction of a new step in which a critical quantity of autochthonous microorganisms, measured as adenosine triphosphate, is added. For the samples analyzed, this improvement allowed us to obtain reliable and replicable BOD measurements, standardized with solutions of glucose-glutamic acid and acetate. After 7 days of analysis duration, more than 80% of ultimate BOD is achieved, which in the case of easily biodegradable compounds represents nearly a 60% of the theoretical oxygen demand. BOD(7) obtained from the Mediterranean Sea found to be 2.0±0.3 mgO(2)L(-1) but this value decreased with seawater storage time due to the rapid consumption of labile compounds. No significant differences were found between two samples points located on the Spanish coast, since their organic matter content was similar. Finally, the determination of seawater BOD without the use of inoculum may lead to an underestimation of BOD. PMID:21645736

  18. A Novel Terminal-Repeat Retrotransposon in Miniature (TRIM) Is Massively Expressed in Echinococcus multilocularis Stem Cells

    PubMed Central

    Koziol, Uriel; Radio, Santiago; Smircich, Pablo; Zarowiecki, Magdalena; Fernández, Cecilia; Brehm, Klaus

    2015-01-01

    Taeniid cestodes (including the human parasites Echinococcus spp. and Taenia solium) have very few mobile genetic elements (MGEs) in their genome, despite lacking a canonical PIWI pathway. The MGEs of these parasites are virtually unexplored, and nothing is known about their expression and silencing. In this work, we report the discovery of a novel family of small nonautonomous long terminal repeat retrotransposons (also known as terminal-repeat retrotransposons in miniature, TRIMs) which we have named ta-TRIM (taeniid TRIM). ta-TRIMs are only the second family of TRIM elements discovered in animals, and are likely the result of convergent reductive evolution in different taxonomic groups. These elements originated at the base of the taeniid tree and have expanded during taeniid diversification, including after the divergence of closely related species such as Echinococcus multilocularis and Echinococcus granulosus. They are massively expressed in larval stages, from a small proportion of full-length copies and from isolated terminal repeats that show transcriptional read-through into downstream regions, generating novel noncoding RNAs and transcriptional fusions to coding genes. In E. multilocularis, ta-TRIMs are specifically expressed in the germinative cells (the somatic stem cells) during asexual reproduction of metacestode larvae. This would provide a developmental mechanism for insertion of ta-TRIMs into cells that will eventually generate the adult germ line. Future studies of active and inactive ta-TRIM elements could give the first clues on MGE silencing mechanisms in cestodes. PMID:26133390

  19. Binding of the Rhesus TRIM5α PRYSPRY Domain to Capsid is Necessary but not Sufficient for HIV-1 Restriction

    PubMed Central

    Yang, Yang; Branderiz-Nuñez, Alberto; Fricke, Thomas; Ivanov, Dmitri; Sarnak, Zoe; Diaz-Griffero, Felipe

    2013-01-01

    The PRYSPRY domain of TRIM5α provides specificity and the capsid recognition motif to retroviral restriction. Restriction of HIV-1 by rhesus TRIM5α (TRIM5αrh) has been correlated to its ability to bind to the HIV-1 core, suggesting that capsid binding is required for restriction. This work explores whether the PRYSPRY domain of TRIM5αrh exhibits an additional function besides binding to the HIV-1 core. Using our recently described structure of the PRYSPRY domain, we performed an exhaustive structure-function study of the surface and interior residues of the PRYSPRY domain. Testing retroviral restriction and capsid binding of an extensive collection of 60 TRIM5αrh PRYSPRY variants revealed that binding is necessary but not sufficient for restriction. In support of this hypothesis, we showed that some human tripartite motif proteins bind the HIV-1 capsid but do not restrict HIV-1 infection, such as human TRIM6 and TRIM34. Overall this work suggested that the PRYSPRY domain serves an unknown function, distinct from the binding of TRIM5αrh to the HIV-1 core, to block HIV-1 infection. PMID:24314652

  20. TRIM26 Negatively Regulates Interferon-β Production and Antiviral Response through Polyubiquitination and Degradation of Nuclear IRF3

    PubMed Central

    Wang, Peng; Zhao, Wei; Zhao, Kai; Zhang, Lei; Gao, Chengjiang

    2015-01-01

    Virus infection leads to the activation of transcription factor IRF3 and subsequent production of type I inteferons, which induce the transcription of various antiviral genes called interferon stimulated genes (ISGs) to eliminate viral infection. IRF3 activation requires phosphorylation, dimerization and nuclear translocation. However, the mechanisms for the termination of IRF3 activation in nucleus are elusive. Here we report the identification of TRIM26 to negatively regulate IFN-β production and antiviral response by targeting nuclear IRF3. TRIM26 bound to IRF3 and promoted its K48-linked polyubiquitination and degradation in nucleus. TRIM26 degraded WT IRF3 and the constitutive active mutant IRF3 5D, but not the phosphorylation deficient mutant IRF3 5A. Furthermore, IRF3 mutant in the Nuclear Localization Signal (NLS), which could not move into nucleus, was not degraded by TRIM26. Importantly, virus infection promoted TRIM26 nuclear translocation, which was required for IRF3 degradation. As a consequence, TRIM26 attenuated IFN-β promoter activation and IFN-β production downstream of TLR3/4, RLR and DNA sensing pathways. TRIM26 transgenic mice showed much less IRF3 activation and IFN-β production, while increased virus replication. Our findings delineate a novel mechanism for the termination of IRF3 activation in nucleus through TRIM26-mediated IRF3 ubiquitination and degradation. PMID:25763818

  1. 77 FR 67399 - Trim Systems Operating Corp., a Subsidiary of Commercial Vehicle Group, Inc., Including On-Site...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-11-09

    ... Employment and Training Administration Trim Systems Operating Corp., a Subsidiary of Commercial Vehicle Group... of Trim Systems Operating Corp., a subsidiary of Commercial Vehicle Group, Inc., Statesville, North..., who were adversely affected by a shift in production to a foreign country. The amended...

  2. A Novel Terminal-Repeat Retrotransposon in Miniature (TRIM) Is Massively Expressed in Echinococcus multilocularis Stem Cells.

    PubMed

    Koziol, Uriel; Radio, Santiago; Smircich, Pablo; Zarowiecki, Magdalena; Fernández, Cecilia; Brehm, Klaus

    2015-08-01

    Taeniid cestodes (including the human parasites Echinococcus spp. and Taenia solium) have very few mobile genetic elements (MGEs) in their genome, despite lacking a canonical PIWI pathway. The MGEs of these parasites are virtually unexplored, and nothing is known about their expression and silencing. In this work, we report the discovery of a novel family of small nonautonomous long terminal repeat retrotransposons (also known as terminal-repeat retrotransposons in miniature, TRIMs) which we have named ta-TRIM (taeniid TRIM). ta-TRIMs are only the second family of TRIM elements discovered in animals, and are likely the result of convergent reductive evolution in different taxonomic groups. These elements originated at the base of the taeniid tree and have expanded during taeniid diversification, including after the divergence of closely related species such as Echinococcus multilocularis and Echinococcus granulosus. They are massively expressed in larval stages, from a small proportion of full-length copies and from isolated terminal repeats that show transcriptional read-through into downstream regions, generating novel noncoding RNAs and transcriptional fusions to coding genes. In E. multilocularis, ta-TRIMs are specifically expressed in the germinative cells (the somatic stem cells) during asexual reproduction of metacestode larvae. This would provide a developmental mechanism for insertion of ta-TRIMs into cells that will eventually generate the adult germ line. Future studies of active and inactive ta-TRIM elements could give the first clues on MGE silencing mechanisms in cestodes. PMID:26133390

  3. Emissions of parent, nitrated, and oxygenated polycyclic aromatic hydrocarbons from indoor corn straw burning in normal and controlled combustion conditions

    PubMed Central

    Shen, Guofeng; Xue, Miao; Wei, Siye; Chen, Yuanchen; Wang, Bin; Wang, Rong; Lv, Yan; Shen, Huizhong; Li, Wei; Zhang, Yanyan; Huang, Ye; Chen, Han; Wei, Wen; Zhao, Qiuyue; Li, Bin; Wu, Haisuo; Tao, Shu

    2014-01-01

    Emission factors (EFs) of parent polycyclic aromatic (pPAHs), nitrated PAHs (nPAHs), and oxygenated PAHs (oPAHs) were measured for indoor corn straw burned in a cooking brick stove in both normal and controlled burning conditions. EFs of total 28 pPAHs, 6 nPAHs and 4 oPAHs were 7.9±3.4, 6.5±1.6×10-3, and 6.1±1.4×10-1 mg/kg, respectively. By controlling the burning conditions, it was found that the influence of fuel charge size on EFs of the pPAHs and derivatives was insignificant. Measured EFs increased significantly in a fast burning mainly because of the oxygen deficient atmosphere formed in the stove chamber with a small volume. In both restricted and enhance air supply conditions, EFs of pPAHs, nPAHs and oPAHs were significantly higher than those measured in normal burning conditions. Though EFs varied in different burning conditions, the composition profiles and calculated isomer ratios were similar without significant differences. The results from the stepwise regression model showed that fuel burning rate, air supply amount, and modified combustion efficiency were three most significant influencing factors, explaining 72-85% of the total variations. PMID:24494494

  4. Hovering and forward flight of the hawkmoth Manduca sexta: trim search and 6-DOF dynamic stability characterization.

    PubMed

    Kim, Joong-Kwan; Han, Jong-Seob; Lee, Jun-Seong; Han, Jae-Hung

    2015-10-01

    We show that the forward flight speed affects the stability characteristics of the longitudinal and lateral dynamics of a flying hawkmoth; dynamic modal structures of both the planes of motion are altered due to variations in the stability derivatives. The forward flight speed u e is changed from 0.00 to 1.00 m s(-1) with an increment of 0.25 m s(-1). (The equivalent advance ratio is 0.00 to 0.38; the advance ratio is the ratio of the forward flight speed to the average wing tip speed.) As the flight speed increases, for the longitudinal dynamics, an unstable oscillatory mode becomes more unstable. Also, we show that the up/down (w(b)) dynamics become more significant at a faster flight speed due to the prominent increase in the stability derivative Z(u) (up/down force due to the forward/backward velocity). For the lateral dynamics, the decrease in the stability derivative L(v) (roll moment due to side slip velocity) at a faster flight speed affects a slightly damped stable oscillatory mode, causing it to become more stable; however, the t(half) (the time taken to reach half the amplitude) of this slightly damped stable oscillatory mode remains relatively long (∼12T at u(e) = 1 m s(-1); T is wingbeat period) compared to the other modes of motion, meaning that this mode represents the most vulnerable dynamics among the lateral dynamics at all flight speeds. To obtain the stability derivatives, trim conditions for linearization are numerically searched to find the exact trim trajectory and wing kinematics using an algorithm that uses the gradient information of a control effectiveness matrix and fully coupled six-degrees of freedom nonlinear multibody equations of motion. With this algorithm, trim conditions that consider the coupling between the dynamics and aerodynamics can be obtained. The body and wing morphology, and the wing kinematics used in this study are based on actual measurement data from the relevant literature. The aerodynamic model of the flapping

  5. Hovering and forward flight of the hawkmoth Manduca sexta: trim search and 6-DOF dynamic stability characterization.

    PubMed

    Kim, Joong-Kwan; Han, Jong-Seob; Lee, Jun-Seong; Han, Jae-Hung

    2015-09-28

    We show that the forward flight speed affects the stability characteristics of the longitudinal and lateral dynamics of a flying hawkmoth; dynamic modal structures of both the planes of motion are altered due to variations in the stability derivatives. The forward flight speed u e is changed from 0.00 to 1.00 m s(-1) with an increment of 0.25 m s(-1). (The equivalent advance ratio is 0.00 to 0.38; the advance ratio is the ratio of the forward flight speed to the average wing tip speed.) As the flight speed increases, for the longitudinal dynamics, an unstable oscillatory mode becomes more unstable. Also, we show that the up/down (w(b)) dynamics become more significant at a faster flight speed due to the prominent increase in the stability derivative Z(u) (up/down force due to the forward/backward velocity). For the lateral dynamics, the decrease in the stability derivative L(v) (roll moment due to side slip velocity) at a faster flight speed affects a slightly damped stable oscillatory mode, causing it to become more stable; however, the t(half) (the time taken to reach half the amplitude) of this slightly damped stable oscillatory mode remains relatively long (∼12T at u(e) = 1 m s(-1); T is wingbeat period) compared to the other modes of motion, meaning that this mode represents the most vulnerable dynamics among the lateral dynamics at all flight speeds. To obtain the stability derivatives, trim conditions for linearization are numerically searched to find the exact trim trajectory and wing kinematics using an algorithm that uses the gradient information of a control effectiveness matrix and fully coupled six-degrees of freedom nonlinear multibody equations of motion. With this algorithm, trim conditions that consider the coupling between the dynamics and aerodynamics can be obtained. The body and wing morphology, and the wing kinematics used in this study are based on actual measurement data from the relevant literature. The aerodynamic model of the flapping

  6. Regulation of MDA5-MAVS Antiviral Signaling Axis by TRIM25 through TRAF6-Mediated NF-κB Activation

    PubMed Central

    Lee, Na-Rae; Kim, Hye-In; Choi, Myung-Soo; Yi, Chae-Min; Inn, Kyung-Soo

    2015-01-01

    Tripartite motif protein 25 (TRIM25), mediates K63-linked polyubiquitination of Retinoic acid inducible gene I (RIG-I) that is crucial for downstream antiviral interferon signaling. Here, we demonstrate that TRIM25 is required for melanoma differentiation-associated gene 5 (MDA5) and MAVS mediated activation of NF-κB and interferon production. TRIM25 is required for the full activation of NF-κB at the downstream of MAVS, while it is not involved in IRF3 nuclear translocation. Mechanical studies showed that TRIM25 is involved in TRAF6-mediated NF-κB activation. These collectively indicate that TRIM25 plays an additional role in RIG-I/MDA5 signaling other than RIG-I ubiquitination via activation of NF-κB. PMID:26299329

  7. Effect of hot water treatment of beef trimmings on processing characteristics and eating quality of ground beef.

    PubMed

    Pietrasik, Z; Gaudette, N J; Klassen, M

    2016-03-01

    The effect of hot water treatment of beef trimmings on the processing characteristics, shelf-life and consumer acceptability of ground beef was evaluated. Hot water treatment (85°C for 40s) substantially enhanced the microbial quality of trimmings during refrigerated storage and this was independent of the fat level of the trimmings. Treatment had no effect on the oxidative stability of trimmings stored up to 7days, ground beef displayed in a retail cabinet for up to 3days, and had minimal effect on textural properties. Instrumental results demonstrate that ground beef from hot water treated trimmings was slightly lighter and tended to have less red color compared to non-treated beef. These color differences did not impact the consumer acceptance of raw patties, and in addition, hot water treatment did not significantly affect the consumer acceptability of cooked patty attributes. PMID:26610290

  8. Photodynamic molecular beacon as an activatable photosensitizer based on protease-controlled singlet oxygen quenching and activation.

    PubMed

    Zheng, Gang; Chen, Juan; Stefflova, Klara; Jarvi, Mark; Li, Hui; Wilson, Brian C

    2007-05-22

    Molecular beacons are FRET-based target-activatable probes. They offer control of fluorescence emission in response to specific cancer targets, thus are useful tools for in vivo cancer imaging. Photodynamic therapy (PDT) is a cell-killing process by light activation of a photosensitizer (PS) in the presence of oxygen. The key cytotoxic agent is singlet oxygen ((1)O(2)). By combining these two principles (FRET and PDT), we have introduced a concept of photodynamic molecular beacons (PMB) for controlling the PS's ability to generate (1)O(2) and, ultimately, for controlling its PDT activity. The PMB comprises a disease-specific linker, a PS, and a (1)O(2) quencher, so that the PS's photoactivity is silenced until the linker interacts with a target molecule, such as a tumor-associated protease. Here, we report the full implementation of this concept by synthesizing a matrix metalloproteinase-7 (MMP7)-triggered PMB and achieving not only MMP7-triggered production of (1)O(2) in solution but also MMP7-mediated photodynamic cytotoxicity in cancer cells. Preliminary in vivo studies also reveal the MMP7-activated PDT efficacy of this PMB. This study validates the core principle of the PMB concept that selective PDT-induced cell death can be achieved by exerting precise control of the PS's ability to produce (1)O(2) by responding to specific cancer-associated biomarkers. Thus, PDT selectivity will no longer depend solely on how selectively the PS can be delivered to cancer cells. Rather, it will depend on how selective a biomarker is to cancer cells, and how selective the interaction of PMB is to this biomarker.

  9. Controls on water acidification and de-oxygenation in an estuarine waterway, eastern Australia

    NASA Astrophysics Data System (ADS)

    Lin, C.; Wood, M.; Haskins, P.; Ryffel, T.; Lin, J.

    2004-09-01

    The quality of soil and water was investigated in an estuarine floodplain system, eastern Australia. The backswamp portion of the floodplain is underlain by sulfidic sediments at depths about 0.5-0.9 m below the ground surface. Actual acid sulfate soils have developed due to sulfide oxidation as a consequence of land drainage since the early 1900s. These acid sulfate soils have a high measured total actual acidity (TAA, up to 500 mmol H +/kg). However, only a very small proportion (<2%) of this TAA occurs in a water-soluble form. Water quality monitoring in the creek (Rocky Mouth Creek) draining the estuarine embayment during the period from May 1998 to July 2000 shows that acidic flows (pH<4.5) of several months occurred intermittently in the upper reach of the creek. This may be attributed to the hydrolysis of Fe 3+ after the oxidation of Fe 2+ that is exported into the creek from acid sulfate soils through an artificial drain network. It is hypothesized that Fe 2+ is being generated by biological iron reduction, which consumes H + and thereby drives the conversion of retained acids to soluble acids. This allows the release of retained acids and subsequently the translocation of acids from soils to the adjacent waterway. Monitoring results also show clear responses of pH and dissolved oxygen (DO) to heavy rainfall events during the period of alternating high (>6) pH-dominated flows. Frequently, pH and DO levels in the creek water drop during flooding. Results from field investigation and experimental simulation suggest that DO depletion associated with organic matter decomposition takes place rapidly in the floodwater inundating the soils and this DO-depleted water has a significant capacity to further de-oxygenate any receiving water. However, the consumption of DO in floodwater is not clearly related to oxidation of Fe 2+. It is not certain what other DO consumers are involved in the process and further research is needed to fill this knowledge gap.

  10. The Effect of Patient-Specific Cerebral Oxygenation Monitoring on Postoperative Cognitive Function: A Multicenter Randomized Controlled Trial

    PubMed Central

    Ellis, Lucy; Murphy, Gavin J; Culliford, Lucy; Dreyer, Lucy; Clayton, Gemma; Downes, Richard; Nicholson, Eamonn; Stoica, Serban; Reeves, Barnaby C

    2015-01-01

    Background Indices of global tissue oxygen delivery and utilization such as mixed venous oxygen saturation, serum lactate concentration, and arterial hematocrit are commonly used to determine the adequacy of tissue oxygenation during cardiopulmonary bypass (CPB). However, these global measures may not accurately reflect regional tissue oxygenation and ischemic organ injury remains a common and serious complication of CPB. Near-infrared spectroscopy (NIRS) is a noninvasive technology that measures regional tissue oxygenation. NIRS may be used alongside global measures to optimize regional perfusion and reduce organ injury. It may also be used as an indicator of the need for red blood cell transfusion in the presence of anemia and tissue hypoxia. However, the clinical benefits of using NIRS remain unclear and there is a lack of high-quality evidence demonstrating its efficacy and cost effectiveness. Objective The aim of the patient-specific cerebral oxygenation monitoring as part of an algorithm to reduce transfusion during heart valve surgery (PASPORT) trial is to determine whether the addition of NIRS to CPB management algorithms can prevent cognitive decline, postoperative organ injury, unnecessary transfusion, and reduce health care costs. Methods Adults aged 16 years or older undergoing valve or combined coronary artery bypass graft and valve surgery at one of three UK cardiac centers (Bristol, Hull, or Leicester) are randomly allocated in a 1:1 ratio to either a standard algorithm for optimizing tissue oxygenation during CPB that includes a fixed transfusion threshold, or a patient-specific algorithm that incorporates cerebral NIRS monitoring and a restrictive red blood cell transfusion threshold. Allocation concealment, Internet-based randomization stratified by operation type and recruiting center, and blinding of patients, ICU and ward care staff, and outcome assessors reduce the risk of bias. The primary outcomes are cognitive function 3 months after

  11. TRIM29 Overexpression Promotes Proliferation and Survival of Bladder Cancer Cells through NF-κB Signaling

    PubMed Central

    Tan, Shu-Tao; Liu, Sheng-Ye; Wu, Bin

    2016-01-01

    Purpose TRIM29 overexpression has been reported in several human malignancies and showed correlation with cancer cell malignancy. The aim of the current study is to examine its clinical significance and biological roles in human bladder cancer tissues and cell lines. Materials and Methods A total of 102 cases of bladder cancer tissues were examined for TRIM29 expression by immunohistochemistry. siRNA and plasmid transfection were performed in 5637 and BIU-87 cell lines. Cell Counting Kit-8, flow cytometry, western blot, and real-time polymerase chain reaction were performed to examine its biological roles and mechanism in bladder cancer cells. Results We found that TRIM29 overexpression showed correlation with invading depth (p=0.0087). Knockdown of TRIM29 expression in bladder cancer cell line 5637 inhibited cell growth rate and cell cycle transition while its overexpression in BIU-87 cells accelerated cell proliferation and cell cycle progression. TRIM29 overexpression also inhibited cell apoptosis induced by cisplatin. In addition, we demonstrated that TRIM29 depletion decreased while its overexpression led to upregulated expression of cyclin D1, cyclin E, and Bcl-2. We also showed that TRIM29 knockdown inhibited protein kinase C (PKC) and nuclear factor κB (NF-κB) signaling while its overexpression stimulated the PKC and NF-κB pathways. BAY 11-7082 (NF-κB inhibitor) partly attenuated the effect of TRIM29 on expression of cyclin and Bcl-2. Treatment with PKC inhibitor staurosporine resulted in ameliorated TRIM29 induced activation of NF-κB. Conclusion The current study demonstrated that TRIM29 upregulates cyclin and Bcl family proteins level to facilitate malignant cell growth and inhibit drug-induced apoptosis in bladder cancer, possibly through PKC–NF-κB signaling pathways. PMID:26987391

  12. End station design and wafer quality control for a high current oxygen implanter

    NASA Astrophysics Data System (ADS)

    Douglas-Hamilton, D. H.; Ruffell, John P.; Kaim, R. E.; Izumi, K.

    The end station of the Eaton NV-200 high current oxygen implanter is described. In this machine the beam enters at 30° from the horizontal and the wafers are mounted on the inside surface of a slightly conical drum which rotates about a vertical axis. A cone half angle of 16° results in an implant angle of 14°. The drum rotates at a high speed and the beam is broadened into a line which fully illuminates the wafers without scanning, resulting in a uniform implant as the wafers pass through it on the rotating drum. By adjusting the ion source apertures and beam line optics implant uniformity within a few percent has been achieved over the whole wafer. The drum holds twenty-five 4 in. wafers per batch. Sampling holes located in the drum together with a Faraday plate in the end station are used to monitor beam uniformity. Dose measurement is done calorimetrically using the power into the end station to calculate the integrated dose. The end station is equipped with heater lamps which will preheat the wafers to the desired temperature before the implantation process is begun. These lamps are also utilized to maintain the wafers at an elevated temperature if the implant is interrupted.

  13. Oxygen-controlled regulation of the flavohemoglobin gene in Bacillus subtilis.

    PubMed Central

    LaCelle, M; Kumano, M; Kurita, K; Yamane, K; Zuber, P; Nakano, M M

    1996-01-01

    A gene, hmp, which encodes a ubiquitous protein homologous to hemoglobin was isolated among genes from Bacillus subtilis that are induced under anaerobic conditions. The hmp protein belongs to the family of two-domain flavohemoproteins, homologs of which have been isolated from various organisms such as Escherichia coli, Alcaligenes eutrophus, and Saccharomyces cerevisiae. These proteins consist of an amino-terminal hemoglobin domain and a carboxy-terminal redox active site domain with potential binding sites for NAD(P)H and flavin adenine dinucleotide. The expression of hmp is strongly induced upon oxygen limitation, and the induction is dependent on a two-component regulatory pair, ResD and ResE, an anaerobic regulator, FNR, and respiratory nitrate reductase, NarGHJI. The requirement of FNR and NarGHJI for hmp expression is completely bypassed by the addition of nitrite in the culture medium, indicating that fnr is required for transcriptional activation of narGHJI, which produces nitrite, leading to induction of hmp expression. In contrast, induction of hmp was still dependent on resDE in the presence of nitrite. A defect in hmp in B. subtilis has no significant effect on anaerobic growth. PMID:8682784

  14. Adhesive Fiber Stratification in Uropathogenic Escherichia coli Biofilms Unveils Oxygen-Mediated Control of Type 1 Pili

    PubMed Central

    Floyd, Kyle A.; Moore, Jessica L.; Eberly, Allison R.; Good, James A. D.; Shaffer, Carrie L.; Zaver, Himesh; Almqvist, Fredrik; Skaar, Eric P.; Caprioli, Richard M.; Hadjifrangiskou, Maria

    2015-01-01

    Bacterial biofilms account for a significant number of hospital-acquired infections and complicate treatment options, because bacteria within biofilms are generally more tolerant to antibiotic treatment. This resilience is attributed to transient bacterial subpopulations that arise in response to variations in the microenvironment surrounding the biofilm. Here, we probed the spatial proteome of surface-associated single-species biofilms formed by uropathogenic Escherichia coli (UPEC), the major causative agent of community-acquired and catheter-associated urinary tract infections. We used matrix-assisted laser desorption/ionization (MALDI) time-of-flight (TOF) imaging mass spectrometry (IMS) to analyze the spatial proteome of intact biofilms in situ. MALDI-TOF IMS revealed protein species exhibiting distinct localizations within surface-associated UPEC biofilms, including two adhesive fibers critical for UPEC biofilm formation and virulence: type 1 pili (Fim) localized exclusively to the air-exposed region, while curli amyloid fibers localized to the air-liquid interface. Comparison of cells grown aerobically, fermentatively, or utilizing an alternative terminal electron acceptor showed that the phase-variable fim promoter switched to the “OFF” orientation under oxygen-deplete conditions, leading to marked reduction of type 1 pili on the bacterial cell surface. Conversely, S pili whose expression is inversely related to fim expression were up-regulated under anoxic conditions. Tethering the fim promoter in the “ON” orientation in anaerobically grown cells only restored type 1 pili production in the presence of an alternative terminal electron acceptor beyond oxygen. Together these data support the presence of at least two regulatory mechanisms controlling fim expression in response to oxygen availability and may contribute to the stratification of extracellular matrix components within the biofilm. MALDI IMS facilitated the discovery of these mechanisms

  15. Helmet CPAP versus Oxygen Therapy in Hypoxemic Acute Respiratory Failure: A Meta-Analysis of Randomized Controlled Trials

    PubMed Central

    Luo, Yuwen; Luo, Yan; Li, Yun; Zhou, Luqian; Zhu, Zhe; Chen, Yitai; Huang, Yuxia

    2016-01-01

    Purpose The efficacy of helmet continuous positive airway pressure (CPAP) in hypoxemic acute respiratory failure (hARF) remains unclear. The aim of this meta-analysis was to critically review studies that investigated the effect of helmet CPAP on gas exchange, mortality, and intubation rate in comparison with standard oxygen therapy. Materials and Methods We performed a meta-analysis of randomized controlled trials (RCTs) by searching the PubMed, Embase, Cochrane library, OVID, and CBM databases, and the bibliographies of the retrieved articles. Studies that enrolled adults with hARF who were treated with helmet CPAP and measured at least one of the following parameters were included: gas exchange, intubation rate, in-hospital mortality rate. Results Four studies with 377 subjects met the inclusion criteria and were analyzed. Compared to the standard oxygen therapy, helmet CPAP significantly increased the PaO2/FiO2 [weighted mean difference (WMD)=73.40, 95% confidence interval (95% CI): 43.92 to 102.87, p<0.00001], and decreased the arterial carbon dioxide levels (WMD=-1.92, 95% CI: -3.21 to -0.63, p=0.003), intubation rate [relative risk (RR)=0.21, 95% CI: 0.11 to 0.40, p<0.00001], and in-hospital mortality rate (RR=0.22, 95% CI: 0.09 to 0.50, p=0.0004). Conclusion The results of this meta-analysis suggest that helmet CPAP improves oxygenation and reduces mortality and intubation rates in hARF. However, the significant clinical and statistical heterogeneity of the literature implies that large RCTs are needed to determine the role of helmet CPAP in different hypoxemic ARF populations. PMID:27189288

  16. Characterization of terminal-repeat retrotransposon in miniature (TRIM) in Brassica relatives.

    PubMed

    Yang, Tae-Jin; Kwon, Soo-Jin; Choi, Beom-Soon; Kim, Jung Sun; Jin, Mina; Lim, Ki-Byung; Park, Jee Young; Kim, Jin-A; Lim, Myung-Ho; Kim, Ho-Il; Lee, Hyo-Jin; Lim, Yong Pyo; Paterson, Andrew H; Park, Beom-Seok

    2007-02-01

    We have newly identified five Terminal-repeat retrotransposon in miniature (TRIM) families, four from Brassica and one from Arabidopsis. A total of 146 elements, including three Arabidopsis families reported before, are extracted from genomics data of Brassica and Arabidopsis, and these are grouped into eight distinct lineages, Br1 to Br4 derived from Brassica and At1 to At4 derived from Arabidopsis. Based on the occurrence of TRIM elements in 434 Mb of B. oleracea shotgun sequences and 96 Mb of B. rapa BAC end sequences, total number of TRIM members of Br1, Br2, Br3, and Br4 families are roughly estimated to be present in 660 and 530 copies in B. oleracea and B. rapa genomes, respectively. Studies on insertion site polymorphisms of four elements across taxa in the tribe Brassiceae infer the taxonomic lineage and dating of the insertion time. Active roles of the TRIM elements for evolution of the duplicated genes are inferred in the highly replicated Brassica genome.

  17. Sample Size Determination for One- and Two-Sample Trimmed Mean Tests

    ERIC Educational Resources Information Center

    Luh, Wei-Ming; Olejnik, Stephen; Guo, Jiin-Huarng

    2008-01-01

    Formulas to determine the necessary sample sizes for parametric tests of group comparisons are available from several sources and appropriate when population distributions are normal. However, in the context of nonnormal population distributions, researchers recommend Yuen's trimmed mean test, but formulas to determine sample sizes have not been…

  18. 16 CFR 300.23 - Linings, paddings, stiffening, trimmings and facings.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... apparel which are wool products, the fiber content of any linings, paddings, stiffening, trimmings or... (2) If such linings are metallically coated, or coated or laminated with any substance for warmth, or... a class of articles which is customarily accompanied by express or implied representations of...

  19. 16 CFR 300.23 - Linings, paddings, stiffening, trimmings and facings.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... apparel which are wool products, the fiber content of any linings, paddings, stiffening, trimmings or... (2) If such linings are metallically coated, or coated or laminated with any substance for warmth, or... a class of articles which is customarily accompanied by express or implied representations of...

  20. 16 CFR 300.23 - Linings, paddings, stiffening, trimmings and facings.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... apparel which are wool products, the fiber content of any linings, paddings, stiffening, trimmings or... (2) If such linings are metallically coated, or coated or laminated with any substance for warmth, or... a class of articles which is customarily accompanied by express or implied representations of...

  1. 16 CFR 300.23 - Linings, paddings, stiffening, trimmings and facings.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... apparel which are wool products, the fiber content of any linings, paddings, stiffening, trimmings or... (2) If such linings are metallically coated, or coated or laminated with any substance for warmth, or... a class of articles which is customarily accompanied by express or implied representations of...

  2. 16 CFR 300.23 - Linings, paddings, stiffening, trimmings and facings.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... apparel which are wool products, the fiber content of any linings, paddings, stiffening, trimmings or... (2) If such linings are metallically coated, or coated or laminated with any substance for warmth, or... a class of articles which is customarily accompanied by express or implied representations of...

  3. 46 CFR 116.422 - Ceilings, linings, trim, interior finish and decorations.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... specified by the Commandant; or (2) Listed by Underwriters Laboratories, does not exceed 2 millimeters (.075... 2 millimeters (.075 inches); and (2) The total volume of the combustible face trim, moldings, and decorations, including veneers, in any space does not exceed a volume equivalent to a 2.5 millimeter (0.1...

  4. 46 CFR 116.422 - Ceilings, linings, trim, interior finish and decorations.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... specified by the Commandant; or (2) Listed by Underwriters Laboratories, does not exceed 2 millimeters (.075... 2 millimeters (.075 inches); and (2) The total volume of the combustible face trim, moldings, and decorations, including veneers, in any space does not exceed a volume equivalent to a 2.5 millimeter (0.1...

  5. Talking with John Trim (Part I): A Career in Phonetics, Applied Linguistics and the Public Service

    ERIC Educational Resources Information Center

    Little, David; King, Lid

    2013-01-01

    As this issue was in preparation, the journal learned with great regret of the passing of John Trim. John was a long-serving member of the "Language Teaching" Board and his insight and advice proved invaluable for this and previous editors. An expert in the field of phonetics, linguistics, language didactics and policy, John worked…

  6. EDEM2 initiates mammalian glycoprotein ERAD by catalyzing the first mannose trimming step

    PubMed Central

    Ninagawa, Satoshi; Okada, Tetsuya; Sumitomo, Yoshiki; Kamiya, Yukiko; Kato, Koichi; Horimoto, Satoshi; Ishikawa, Tokiro; Takeda, Shunichi; Sakuma, Tetsushi; Yamamoto, Takashi

    2014-01-01

    Glycoproteins misfolded in the endoplasmic reticulum (ER) are subjected to ER-associated glycoprotein degradation (gpERAD) in which Htm1-mediated mannose trimming from the oligosaccharide Man8GlcNAc2 to Man7GlcNAc2 is the rate-limiting step in yeast. In contrast, the roles of the three Htm1 homologues (EDEM1/2/3) in mammalian gpERAD have remained elusive, with a key controversy being whether EDEMs function as mannosidases or as lectins. We therefore conducted transcription activator-like effector nuclease–mediated gene knockout analysis in human cell line and found that all endogenous EDEMs possess mannosidase activity. Mannose trimming from Man8GlcNAc2 to Man7GlcNAc2 is performed mainly by EDEM3 and to a lesser extent by EDEM1. Most surprisingly, the upstream mannose trimming from Man9GlcNAc2 to Man8GlcNAc2 is conducted mainly by EDEM2, which was previously considered to lack enzymatic activity. Based on the presence of two rate-limiting steps in mammalian gpERAD, we propose that mammalian cells double check gpERAD substrates before destruction by evolving EDEM2, a novel-type Htm1 homologue that catalyzes the first mannose trimming step from Man9GlcNAc2. PMID:25092655

  7. Characterisation of assembly and ubiquitylation by the RBCC motif of Trim

    PubMed Central

    Keown, Jeremy R.; Yang, Joy X.; Douglas, Jordan; Goldstone, David C.

    2016-01-01

    The post-entry restriction factor Trim5α blocks infection of retroviral pathogens shortly after the virus gains entry to the cell, preventing reverse transcription and integration into the host genome. Central to the mechanism of restriction is recognition of the lattice of capsid protein that forms the inner-shell of the retrovirus. To recognise this lattice, Trim5α has been shown to assemble into a large hexagonal array, complementary to the capsid lattice. Structures of the Trim5α coiled-coil region reveal an elongated anti-parallel dimer consistent with the edges of this array placing the Bbox domain at each end of the coiled-coil to facilitate assembly. To investigate the nature of this assembly we have designed and characterised a monomeric version of the TRIM RBCC motif with a truncated coiled-coil. Biophysical characterisation by SEC-MALLS, AUC, and SAXS demonstrate that this construct forms compact folded domain that assembles into a trimer that would support the formation of a hexagonal lattice. Furthermore, the RING domain and elements of the coiled-coil region are shown to contribute to assembly. Ubiquitylation assays demonstrate that this assembly increases ubiquitylation activity providing a link from recognition of the capsid lattice and assembly to the activation of innate immune signalling and restriction. PMID:27230667

  8. Quantitative biomechanical analysis of wrist motion in bone-trimming jobs in the meat packing industry.

    PubMed

    Marklin, R W; Monroe, J F

    1998-02-01

    This study was motivated by the serious impact that cumulative trauma disorders (CTDs) of the upper extremities have on the meat packing industry. To date, no quantitative data have been gathered on the kinematics of hand and wrist motion required in bone-trimming jobs in the red-meat packing industry and how these motions are related to the risk of CTDs. The wrist motion of bone-trimming workers from a medium-sized plant was measured, and the kinematic data were compared to manufacturing industry's preliminary wrist motion benchmarks from industrial workers who performed hand-intensive, repetitive work in jobs that were of low and high risk of hand/wrist CTDs. Results of this comparison show that numerous wrist motion variables in both the left and right hands of bone-trimming workers are in the high-risk category. This quantitative analysis provides biomechanical support for the high incidence of CTDs in the meat packing industry. The research reported in this paper established a preliminary database of wrist and hand kinematics required in bone-trimming jobs in the red-meat packing industry. This kinematic database could augment the industry's efforts to reduce the severity and cost of CTDs. Ergonomics practitioners in the industry could use the kinematic methods employed in this research to assess the CTD risk of jobs that require repetitious, hand-intensive work. PMID:9494434

  9. Characterisation of assembly and ubiquitylation by the RBCC motif of Trim5α.

    PubMed

    Keown, Jeremy R; Yang, Joy X; Douglas, Jordan; Goldstone, David C

    2016-01-01

    The post-entry restriction factor Trim5α blocks infection of retroviral pathogens shortly after the virus gains entry to the cell, preventing reverse transcription and integration into the host genome. Central to the mechanism of restriction is recognition of the lattice of capsid protein that forms the inner-shell of the retrovirus. To recognise this lattice, Trim5α has been shown to assemble into a large hexagonal array, complementary to the capsid lattice. Structures of the Trim5α coiled-coil region reveal an elongated anti-parallel dimer consistent with the edges of this array placing the Bbox domain at each end of the coiled-coil to facilitate assembly. To investigate the nature of this assembly we have designed and characterised a monomeric version of the TRIM RBCC motif with a truncated coiled-coil. Biophysical characterisation by SEC-MALLS, AUC, and SAXS demonstrate that this construct forms compact folded domain that assembles into a trimer that would support the formation of a hexagonal lattice. Furthermore, the RING domain and elements of the coiled-coil region are shown to contribute to assembly. Ubiquitylation assays demonstrate that this assembly increases ubiquitylation activity providing a link from recognition of the capsid lattice and assembly to the activation of innate immune signalling and restriction. PMID:27230667

  10. Effect of partial comb and wattle trim on pullet behavior and thermoregulation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The wattles and comb of chickens are important for thermoregulation allowing for heat exchange during high temperatures. These integumentary tissues are sometimes trimmed to prevent tears if caught on cage equipment and to also improve feed efficiency; however, the procedure itself could be painful ...

  11. Evaluation of beef trim sampling methods for detection of Shiga toxin-producing Escherichia coli (STEC)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Presence of Shiga toxin-producing Escherichia coli (STEC) is a major concern in ground beef. Several methods for sampling beef trim prior to grinding are currently used in the beef industry. The purpose of this study was to determine the efficacy of the sampling methods for detecting STEC in beef ...

  12. Automotive Body Trim and Glass; Automotive Mechanics 2: 9045.05.

    ERIC Educational Resources Information Center

    Dade County Public Schools, Miami, FL.

    This document presents an outline for a 135-hour course designed to help students become employable with skills, knowledge, attitudes, and values necessary for performing the required service of the automotive trim and glass mechanic. The course of study includes an orientation to the course, service tools and bench skills development, and a study…

  13. Oxygen Therapy

    MedlinePlus

    Oxygen therapy is a treatment that provides you with extra oxygen. Oxygen is a gas that your body needs to function. Normally, your lungs absorb ... in your home. A different kind of oxygen therapy is called hyperbaric oxygen therapy. It uses oxygen ...

  14. Ultrafast laser trimming for reduced device leakage in high performance OTFT semiconductors for flexible displays

    NASA Astrophysics Data System (ADS)

    Karnakis, Dimitris; Cooke, Michael D.; Chan, Y. F.; Ogier, Simon D.

    2013-03-01

    Organic semiconductors (OSC) are solution processable synthetic materials with high carrier mobility that promise to revolutionise flexible electronics manufacturing due to their low cost, lightweight and high volume low temperature printing in reel-to-reel (R2R) [1] for applications such as flexible display backplanes (Fig.1), RFID tags, and logic/memory devices. Despite several recent technological advances, organic thin film transistor (OTFT) printing is still not production-ready due to limitations mainly with printing resolution on dimensionally unstable substrates and device leakage that reduces dramatically electrical performance. OTFTs have the source-drain in ohmic contact with the OSC material to lower contact resistance. If they are unpatterned, a leakage pathway from source to drain develops which results in non-optimum on/off currents and not controllable device uniformity (Fig.2). DPSS lasers offer several key advantages for OTFT patterning including maskless, non-contact, dry patterning, scalable large area operation with precision registration, well-suited to R2R manufacturing at overall μm size resolutions. But the thermal management of laser processing is very important as the devices are very sensitive to heat and thermomechanical damage [2]. This paper discusses 343nm picosecond laser ablation trimming of 50nm thick PTAA, TIPS pentacene and other semiconductor compounds on thin 50nm thick metal gold electrodes in a top gate configuration. It is shown that with careful optimisation, a suitable process window exists resulting in clean laser structuring without damage to the underlying layers while also containing laser debris. Several order of magnitude improvements were recorded in on/off currents up to 106 with OSC mobilities of 1 cm2/Vsec, albeit at slightly higher than optimum threshold voltages which support demanding flexible display backplane applications.

  15. Activation of Duck RIG-I by TRIM25 Is Independent of Anchored Ubiquitin

    PubMed Central

    Miranzo-Navarro, Domingo; Magor, Katharine E.

    2014-01-01

    Retinoic acid inducible gene I (RIG-I) is a viral RNA sensor crucial in defense against several viruses including measles, influenza A and hepatitis C. RIG-I activates type-I interferon signalling through the adaptor for mitochondrial antiviral signaling (MAVS). The E3 ubiquitin ligase, tripartite motif containing protein 25 (TRIM25), activates human RIG-I through generation of anchored K63-linked polyubiquitin chains attached to lysine 172, or alternatively, through the generation of unanchored K63-linked polyubiquitin chains that interact non-covalently with RIG-I CARD domains. Previously, we identified RIG-I of ducks, of interest because ducks are the host and natural reservoir of influenza viruses, and showed it initiates innate immune signaling leading to production of interferon-beta (IFN-β). We noted that K172 is not conserved in RIG-I of ducks and other avian species, or mouse. Because K172 is important for both mechanisms of activation of human RIG-I, we investigated whether duck RIG-I was activated by TRIM25, and if other residues were the sites for attachment of ubiquitin. Here we show duck RIG-I CARD domains are ubiquitinated for activation, and ubiquitination depends on interaction with TRIM25, as a splice variant that cannot interact with TRIM25 is not ubiquitinated, and cannot be activated. We expressed GST-fusion proteins of duck CARD domains and characterized TRIM25 modifications of CARD domains by mass spectrometry. We identified two sites that are ubiquitinated in duck CARD domains, K167 and K193, and detected K63 linked polyubiquitin chains. Site directed mutagenesis of each site alone, does not alter the ubiquitination profile of the duck CARD domains. However, mutation of both sites resulted in loss of all attached ubiquitin and polyubiquitin chains. Remarkably, the double mutant duck RIG-I CARD still interacts with TRIM25, and can still be activated. Our results demonstrate that anchored ubiquitin chains are not necessary for TRIM25

  16. Effects of two trimming methods of dairy cattle on concrete or rubber-covered slatted floors.

    PubMed

    Ouweltjes, W; Holzhauer, M; van der Tol, P P J; van der Werf, J

    2009-03-01

    This study monitored claw health, claw conformation, locomotion, activity, and step traits of cows from a single dairy herd that were trimmed according to the standard Dutch method or with an alternative "concave" trimming method. Half of the cows were kept in a stall section with concrete slatted floors in the alleys. The other cows were kept in a pen within the same housing with an identical concrete slatted floor in the alleys, but with a rubber top layer. All experimental cows were kept in the same environment for at least 3 mo before and after trimming. It was hypothesized that trimming for more-concave soles (i.e., with 3 to 5 mm of sole dug out under the claw bone) was preferred to the standard Dutch trimming with flat sole surfaces for cows kept in stalls with soft alley floors. None of the claw health or locomotion traits differed for the trimming methods. No interactions were found between flooring and trimming method. Floor effects were significant for several traits. Cows on the rubber-topped floors had significantly fewer sole hemorrhages (prevalence of 22 vs. 48% in mo 3) and larger claws (claw length 76.1 +/- 5.0 vs. 72.5 +/- 4.9 mm; heel height 49.3 +/- 6.3 vs. 46.0 +/- 6.4 mm; claw diagonal 129 +/- 6.4 vs. 125 +/- 6.9 mm), spent more time standing in the alleys (55.4 +/- 2.8 vs. 49.6 +/- 2.8%), and had higher activity (61.0 +/- 3.7 vs. 53.0 +/- 3.7 steps/h). This suggests greater claw comfort on rubber flooring compared with concrete flooring. Kinetic patterns during claw-floor contact while walking were similar for all treatments. During the double-support (stance) phase, claw-floor contact area increased to a maximum in the first 30% of double-support phase time, remained more or less stable until 80% of double-support phase time, and sharply decreased as the animal pushed off as shown by the change in center of pressure. A gradual change of center of pressure in the medial direction during double-support phase time was shown. The research

  17. Atomic Oxygen as the controlling factor in collocation of Elves and OH* Meinel band nightglow

    NASA Astrophysics Data System (ADS)

    Wu, Y. J.; Williams, E. R.; Friedrich, M.; Chang, S. C.; Chou, J. K.; Chen, A. B. C.; Su, H. T.; Hsu, R. R.; Frey, H. U.; Takahashi, Y.; Lee, L. C.

    2015-12-01

    The Imager of Sprite and Upper Atmospheric Lightning (ISUAL) onboard the Formosat-2 satellite has monitored Transient Luminous Events (TLEs) and lightning activity within the latitude interval +/- 60o since May 2004. Channel 1 of the Imager with a bandpass from 623 to 754 nm is the channel usually used for recording TLEs. However, it also covers the wavelength range of the OH* Meinel Band nightglow (8,3) in the infrared region, and this circumstance opens a window for us to study the relationship between OH* nightglow and TLEs. The result shows that over 95% of the elves are within +/- 2 pixels in altitude of the brightest OH* emission. The abrupt increase of atomic oxygen with altitude serves to release electrons from O2- thereby providing electrons the opportunity to attach to meteoric dust eventually. Atomic O is also vital to OH* nightglow as the necessary species to make O3. Additionally , from the fundamental reaction , O+ O2- -> O3 + e- , it can be seen that this is not only a key process to move the free electrons to the ablation dust toward making the electron density ledge, but is also an effective way to make O3 for the OH* nightglow. We suggest that the meteoric dust with abrupt appearance in the electron density ledge forms the upper boundary for the VLF waveguide. This circumstance may justify the use of the VLF waveguide cutoff height as a proxy for the dominant altitude of elves. When the global map of such cutoff heights (Toledo-Redondo et al., 2012) and the OH nightglow (WINDII) heights are compared, both show a distinct wavenumber-4 structure in the low-latitude region. The collocation of elves and the OH* nightglow layer is not coincidental and reveals new information about the structure of the D region.

  18. Reactive Oxygen Species and Nitric Oxide Control Early Steps of the Legume - Rhizobium Symbiotic Interaction.

    PubMed

    Damiani, Isabelle; Pauly, Nicolas; Puppo, Alain; Brouquisse, Renaud; Boscari, Alexandre

    2016-01-01

    The symbiotic interaction between legumes and nitrogen-fixing rhizobium bacteria leads to the formation of a new organ, the nodule. Early steps of the interaction are characterized by the production of bacterial Nod factors, the reorientation of root-hair tip growth, the formation of an infection thread (IT) in the root hair, and the induction of cell division in inner cortical cells of the root, leading to a nodule primordium formation. Reactive oxygen species (ROS) and nitric oxide (NO) have been detected in early steps of the interaction. ROS/NO are determinant signals to arbitrate the specificity of this mutualistic association and modifications in their content impair the development of the symbiotic association. The decrease of ROS level prevents root hair curling and ITs formation, and that of NO conducts to delayed nodule formation. In root hairs, NADPH oxidases were shown to produce ROS which could be involved in the hair tip growth process. The use of enzyme inhibitors suggests that nitrate reductase and NO synthase-like enzymes are the main route for NO production during the early steps of the interaction. Transcriptomic analyses point to the involvement of ROS and NO in the success of the infection process, the induction of early nodulin gene expression, and the repression of plant defense, thereby favoring the establishment of the symbiosis. The occurrence of an interplay between ROS and NO was further supported by the finding of both S-sulfenylated and S-nitrosylated proteins during early symbiotic interaction, linking ROS/NO production to a redox-based regulation of the symbiotic process. PMID:27092165

  19. Reactive Oxygen Species and Nitric Oxide Control Early Steps of the Legume – Rhizobium Symbiotic Interaction

    PubMed Central

    Damiani, Isabelle; Pauly, Nicolas; Puppo, Alain; Brouquisse, Renaud; Boscari, Alexandre

    2016-01-01

    The symbiotic interaction between legumes and nitrogen-fixing rhizobium bacteria leads to the formation of a new organ, the nodule. Early steps of the interaction are characterized by the production of bacterial Nod factors, the reorientation of root-hair tip growth, the formation of an infection thread (IT) in the root hair, and the induction of cell division in inner cortical cells of the root, leading to a nodule primordium formation. Reactive oxygen species (ROS) and nitric oxide (NO) have been detected in early steps of the interaction. ROS/NO are determinant signals to arbitrate the specificity of this mutualistic association and modifications in their content impair the development of the symbiotic association. The decrease of ROS level prevents root hair curling and ITs formation, and that of NO conducts to delayed nodule formation. In root hairs, NADPH oxidases were shown to produce ROS which could be involved in the hair tip growth process. The use of enzyme inhibitors suggests that nitrate reductase and NO synthase-like enzymes are the main route for NO production during the early steps of the interaction. Transcriptomic analyses point to the involvement of ROS and NO in the success of the infection process, the induction of early nodulin gene expression, and the repression of plant defense, thereby favoring the establishment of the symbiosis. The occurrence of an interplay between ROS and NO was further supported by the finding of both S-sulfenylated and S-nitrosylated proteins during early symbiotic interaction, linking ROS/NO production to a redox-based regulation of the symbiotic process. PMID:27092165

  20. Scoparone attenuates RANKL-induced osteoclastic differentiation through controlling reactive oxygen species production and scavenging

    SciTech Connect

    Lee, Sang-Hyun; Jang, Hae-Dong

    2015-02-15

    Scoparone, one of the bioactive components of Artemisia capillaris Thunb, has various biological properties including immunosuppressive, hepatoprotective, anti-allergic, anti-inflammatory, and antioxidant effects. This study aims at evaluating the anti-osteoporotic effect of scoparone and its underlying mechanism in vitro. Scoparone demonstrated potent cellular antioxidant capacity. It was also found that scoparone inhibited the receptor activator of nuclear factor-κB ligand (RANKL)-induced osteoclast differentiation and suppressed cathepsin K and tartrate-resistant acid phosphatase (TRAP) expression via c-jun N-terminal kinase (JNK)/extracellular signal-regulated kinase (ERK)/p38-mediated c-Fos–nuclear factor of activated T cells, cytoplasmic 1 (NFATc1) signaling pathway. During osteoclast differentiation, the production of general reactive oxygen species (ROS) and superoxide anions was dose-dependently attenuated by scoparone. In addition, scoparone diminished NADPH (nicotinamide adenine dinucleotide phosphate) oxidase 1 (Nox1) expression and activation via the tumor necrosis factor receptor-associated factor 6 (TRAF6)–cSrc–phosphatidylinositol 3-kinase (PI3k) signaling pathway and prevented the disruption of mitochondrial electron transport chain system. Furthermore, scoparone augmented the expression of superoxide dismutase 1 (SOD1) and catalase (CAT). The overall results indicate that the inhibitory effect of scoparone on RANKL-induced osteoclast differentiation is attributed to the suppressive effect on ROS and superoxide anion production by inhibiting Nox1 expression and activation and protecting the mitochondrial electron transport chain system and the scavenging effect of ROS resulting from elevated SOD1 and CAT expression. - Highlights: • Scoparone dose-dependently inhibited RANKL-induced osteoclast differentiation. • Scoparone diminished general ROS and superoxide anions in a dose-dependent manner. • Scoparone inhibited Nox1 expression and