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Sample records for paindlik tootearendus lbi

  1. Oil wastes as unconventional substrates for rhamnolipid biosurfactant production by Pseudomonas aeruginosa LBI.

    PubMed

    Nitschke, Marcia; Costa, Siddhartha G V A O; Haddad, Renato; Gonçalves, Lireny A G; Eberlin, Marcos N; Contiero, Jonas

    2005-01-01

    Oil wastes were evaluated as alternative low-cost substrates for the production of rhamnolipids by Pseudomonas aeruginosa LBI strain. Wastes obtained from soybean, cottonseed, babassu, palm, and corn oil refinery were tested. The soybean soapstock waste was the best substrate, generating 11.7 g/L of rhamnolipids with a surface tension of 26.9 mN/m, a critical micelle concentration of 51.5 mg/L, and a production yield of 75%. The monorhamnolipid RhaC(10)C(10) predominates when P. aeruginosa LBI was cultivated on hydrophobic substrates, whereas hydrophilic carbon sources form the dirhamnolipid Rha(2)C(10)C(10) predominantly.

  2. Behavioral responses of catnip (Nepeta cataria l.)by two species of mosquitoes, Aedes aegypti (l.) and Anopheles harrisoni harbach and manguin, in Thailand.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    An investigation of the biological effect of catnip oil (Nepeta cataria L.) on the behavioral response of field collected Ae. aegypti and An. harrisoni were conducted using an automated excito-repellency test system. Aedes aegypti showed significant higher escape rates from the contact chamber at 5%...

  3. Changes in electromyographic activity of trunk muscles within the sub-acute phase for individuals deemed recovered from a low back injury.

    PubMed

    Butler, Heather L; Hubley-Kozey, Cheryl L; Kozey, John W

    2013-04-01

    Evidence indicates that previous low back injury (LBI) is a strong predictor for re-injury. The purpose of this study was to examine whether neuromuscular patterns remain altered in a LBI group who were deemed recovered. Surface electromyograms from 12-abdominal and 12-back extensors sites and motion variables were recorded from 33 LBI individuals (sub-acute phase) and 54 asymptomatic controls. Pain-related variables were recorded and a clinical assessment performed for LBI participants. Subjects performed a symmetrical lift and replace task in two reaches. Pattern recognition techniques were applied to normalized activation amplitude patterns to extract key recruitment strategies. Mixed model ANOVAs tested for effects (p < 0.05). Despite similar task performance, significantly (p < 0.05) different recruitment strategies were observed for the LBI group. There were higher activation amplitudes for LBI subjects in all muscles (except posterior external oblique) and greater co-activation between abdominal and back extensor sites compared to controls. Local abdominal and back extensor sites showed altered responses to increased physical demands in the LBI group. Despite outcomes indicating recovery, the LBI group had altered neuromuscular patterns compared to asymptomatic controls supporting that residual alterations remain following recovery.

  4. Effects of different ratios and storage periods of liquid brewer's yeast mixed with cassava pulp on chemical composition, fermentation quality and in vitro ruminal fermentation.

    PubMed

    Kamphayae, Sukanya; Kumagai, Hajime; Angthong, Wanna; Narmseelee, Ramphrai; Bureenok, Smerjai

    2016-06-11

    This study aims to evaluate the chemical composition, fermentation quality and in vitro ruminal fermentation of various ratios and storage periods of liquid brewer's yeast (LBY) mixed with cassava pulp (CVP). Four mixtures of fresh LBY and CVP were made (LBY0, LBY10, LBY20 and LBY30 for LBY:CVP at 0:100, 10:90, 20:80 and 30:70, respectively) on a fresh matter basis, in 500 g in plastic bags and stored at 30 to 32 °C. After storage, the bags were opened weekly from weeks 0 to 4. Fermentation quality and in vitro gas production (IVGP) were determined, as well as the dry matter (DM), organic matter (OM), crude protein (CP), ether extract (EE), neutral detergent fiber, acid detergent fiber and acid detergent lignin contents. The contents of CP and EE increased, whereas all other components decreased, in proportion to LBY inclusion (p<0.01). The DM and OM contents gradually decreased in weeks 3 and 4 (p<0.05), while EE contents were lowest in week 0. The pH, ammonia nitrogen per total nitrogen (NH3-N/TN) and V-score in each mixture and storage period demonstrated superior fermentation quality (pH≤4.2, NH3-N/TN ≤12.5% and V-score >90%). The pH increased and NH3-N/TN decreased, with proportionate increases of LBY, whereas the pH decreased and NH3-N/TN increased, as the storage periods were extended (p<0.01). Although IVGP decreased in proportion to the amount of LBY inclusion (p<0.01), in vitro organic matter digestibility (IVOMD) was unaffected by the mixture ratios. The highest IVGP and IVOMD were observed in week 0 (p<0.01). We have found that the inclusion of LBY (as high as 30%) into CVP improves the chemical composition of the mixture, thereby increasing the CP content, while decreasing IVGP, without decreasing fermentation quality and IVOMD. In addition, a preservation period of up to four weeks can guarantee superior fermentation quality in all types of mixtures. Therefore, we recommend limiting the use of cassava pulp as a feed ingredient, given its low

  5. Muscle activation imbalance and low-back injury in varsity athletes.

    PubMed

    Reeves, N Peter; Cholewicki, Jacek; Silfies, Sheri P

    2006-06-01

    There are conflicting findings in the literature regarding erector spinae activation imbalance in people with low-back pain (LBP). Some studies have found asymmetric recruitment between muscle pairs in people with LBP, whilst other studies have not; some reported people with LBP recruit more lumbar muscles whilst other have reported greater thoracic activity. Using 242 varsity athletes, EMG activity of thoracic and lumbar erector spinae pairs was recorded during an isometric trunk extension. Activation imbalance among muscle pairs and levels was compared between athletes with and without a history of low-back injury (HxLBI). There were no group differences in the imbalance between sides, but the HxLBI group had greater activation imbalance between lumbar and thoracic levels than the No HxLBI group. Activation imbalance between levels was similar for individuals with No HxLBI and those who sustained first time injury suggesting that imbalance does not cause LBI. There was no difference between the athletes with single and multiple episode LBI, nor between short and long symptom duration suggesting that the presence of imbalance is not an impairment. Interestingly, activation imbalance occurred in both directions, meaning more thoracic activity for some, and more lumbar activity for others, which might be a functional adaptation related to pathology.

  6. Lecithin-Bound Iodine Prevents Disruption of Tight Junctions of Retinal Pigment Epithelial Cells under Hypoxic Stress

    PubMed Central

    Sugimoto, Masahiko; Kondo, Mineo

    2016-01-01

    Aim. We investigated whether lecithin-bound iodine (LBI) can protect the integrity of tight junctions of retinal pigment epithelial cells from hypoxia. Method. Cultured human retinal pigment epithelial (ARPE-19) cells were pretreated with LBI. To mimic hypoxic conditions, cells were incubated with CoCl2. We compared the integrity of the tight junctions (TJs) of control to cells with either LBI alone, CoCl2 alone, or LBI + CoCl2. The levels of cytokines in the conditioned media were also determined. Results. Significant decrease in the zonula occludens-1 (ZO-1) intensity in the CoCl2 group compared to the control (5787.7 ± 4126.4 in CoCl2 group versus 29244.6 ± 2981.2 in control; average ± standard deviation). But the decrease was not significant in the LBI + CoCl2 (27189.0 ± 11231.1). The levels of monocyte chemoattractant protein-1 (MCP-1) and Chemokine (C-C Motif) Ligand 11 (CCL-11) were significantly higher in the CoCl2 than in the control (340.8 ± 43.3 versus 279.7 ± 68.3 pg/mL for MCP-1, and 15.2 ± 12.9 versus 12.5 ± 6.1 pg/mL for CCL-11. With LBI pretreatment, the levels of both cytokines were decreased to 182.6 ± 23.8 (MCP-1) and 5.46 ± 1.9 pg/mL for CCL-11). Blockade of MCP-1 or CCL-11 also shows similar result representing TJ protection from hypoxic stress. Conclusions. LBI results in a protective action from hypoxia. PMID:27340563

  7. Laser blood irradiation effect on electrophysiological characteristics of acute coronary syndrome patients

    NASA Astrophysics Data System (ADS)

    Khotiaintsev, Sergei N.; Doger-Guerrero, E.; Glebova, L.; Svirid, V.; Sirenko, Yuri

    1996-11-01

    This paper treats electro-physiological effects of the low- level laser irradiation of blood (LBI). The data presented here are based on the observation of almost 200 patients suffering from the acute disruption of coronary blood circulation, unstable angina pectoris and myocardial infarction. Statistically significant changes of the electro-physiological characteristics were observed in the group of 65 patients, treated by the LBI. In particular, the significant 6 percent extension of the effective refractory period was observed. The electrical situation threshold has increased by 20.6 percent. The significant changes of some other important electro-physiological characteristics were within the range of 5-15 percent. In this paper, the data obtained on the LBI effectiveness are compared also with the results obtained on 94 patients who in addition to the standard anti-angina therapy were treated by the autohaemo- transfusion performed simultaneously with the UV-light irradiation of the transfused blood. The results obtained demonstrate the significant positive effect of the low energy LBI. The electrophysiological data obtained have good correlation with observed anti-arrhythmic effect of the LBI. This is proved by the data obtained on the electro- physiological characteristics of the cardiovascular system and by other clinical data on the experimental and control group of patients. In the course of this research the exact effect of the low level LBI was established. LBI led to the pronounced positive changes in electro-physiological characteristics of the cardiovascular system of the patients, it also led to the pronounced anti-arrhythmic effect.

  8. Geodetic long baseline interferometry research in Canada

    NASA Technical Reports Server (NTRS)

    Langley, R. B.; Petrachenko, W. T.; Canon, W. H.

    1980-01-01

    The objectives and results of several studies using the Canadian long baseline interferometry system (LBI) are presented. The precision of measurements from radio telescopes at the Algonquin Radio Observatory (ARO), Lake Traverse, Ontario; the Owens Valley Radio Observatory (OVRO), Big Pine, California; and the Chilbolton Observatory (CHIL), Chilbolton, England, is discussed. Also, since LBI is insensitive to the uncertainty in the geocentric gravitational constant, it is a very useful technique for determining the scales of the coordinate systems used by other precise techniques. Beginning in May 1977, a number of LBI observing sessions were accompanied by simultaneous satellite Doppler observations. The baseline components obtained from the satellite Doppler observations were compared to the LBI values. The weighted mean scale bias of the NSWC 9Z-2 satellite Doppler coordinate system relative to the LBI system was found to be 0.42 + or - 0.05 PPM. The weighted mean difference in the origin of longitude was found to be 0.87 sec + or - 0.01 while the difference in declination origin was found to be 0.06 sec + or - 0.01.

  9. One-dimensional model update

    SciTech Connect

    Wuebbles, D.J.; Penner, J.E.; Tarp, R.L.

    1981-01-01

    Changes were made in the reaction kinetics constants for the atmospheric chemistry model. The CH/sub 3/CCl/sub 3/ emission rate was changed to 10/sup 9/ lb/y. Values for the solar flux vs wavelength were updated. Solar variability is discussed. Effects of clouds on photolysis rates are considered. (DLC)

  10. 76 FR 21098 - Internal Revenue Service Advisory Council (IRSAC); Nominations

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-14

    ... taxpaying public, the tax professional community, small and large businesses, international, wage and... year term. There are four subcommittees of IRSAC, the Small Business/Self Employed (SB/SE); Large Business and International (LB&I); Wage & Investment (W&I); and the Office of Professional...

  11. Lupine leghemoglobin I: expression in transgenic Lotus and tobacco tissues.

    PubMed

    Strózycki, P M; Karłowski, W M; Dessaux, Y; Petit, A; Legocki, A B

    2000-03-01

    The proximal parts of the promoters of the genes for symbiotic-type hemoglobins are generally conserved, but the promoter of the lbI gene of lupine (LulbI) shows some unusual structural features. It lacks typical organ-specific elements characteristic of all the leghemoglobin gene promoters described thus far. We have analysed its functional activity in transgenic Lotus corniculatus. A fusion construct between the lbI promoter and the GUS reporter gene was expressed mainly in the central zone of the root nodule, but the product was also detected in the non-nodule root zone and in roots in tissue culture. In roots of transgenic tobacco, the activity of the promoter was only 24% lower than in Lotus nodules. LulbI promoter activity was also detected in tobacco leaves. Lupine hemoglobin I has a higher sequence identity to symbiotic-type hemoglobins and thus it groups within the "Class II" hemoglobins.

  12. Line broadening interference for high-resolution nuclear magnetic resonance spectra under inhomogeneous magnetic fields

    SciTech Connect

    Wei, Zhiliang; Yang, Jian; Lin, Yanqin E-mail: chenz@xmu.edu.cn; Chen, Zhong E-mail: chenz@xmu.edu.cn; Chen, Youhe

    2015-04-07

    Nuclear magnetic resonance spectroscopy serves as an important tool for analyzing chemicals and biological metabolites. However, its performance is subject to the magnetic-field homogeneity. Under inhomogeneous fields, peaks are broadened to overlap each other, introducing difficulties for assignments. Here, we propose a method termed as line broadening interference (LBI) to provide high-resolution information under inhomogeneous magnetic fields by employing certain gradients in the indirect dimension to interfere the magnetic-field inhomogeneity. The conventional spectral-line broadening is thus interfered to be non-diagonal, avoiding the overlapping among adjacent resonances. Furthermore, an inhomogeneity correction algorithm is developed based on pattern recognition to recover the high-resolution information from LBI spectra. Theoretical deductions are performed to offer systematic and detailed analyses on the proposed method. Moreover, experiments are conducted to prove the feasibility of the proposed method for yielding high-resolution spectra in inhomogeneous magnetic fields.

  13. Line broadening interference for high-resolution nuclear magnetic resonance spectra under inhomogeneous magnetic fields.

    PubMed

    Wei, Zhiliang; Yang, Jian; Chen, Youhe; Lin, Yanqin; Chen, Zhong

    2015-04-07

    Nuclear magnetic resonance spectroscopy serves as an important tool for analyzing chemicals and biological metabolites. However, its performance is subject to the magnetic-field homogeneity. Under inhomogeneous fields, peaks are broadened to overlap each other, introducing difficulties for assignments. Here, we propose a method termed as line broadening interference (LBI) to provide high-resolution information under inhomogeneous magnetic fields by employing certain gradients in the indirect dimension to interfere the magnetic-field inhomogeneity. The conventional spectral-line broadening is thus interfered to be non-diagonal, avoiding the overlapping among adjacent resonances. Furthermore, an inhomogeneity correction algorithm is developed based on pattern recognition to recover the high-resolution information from LBI spectra. Theoretical deductions are performed to offer systematic and detailed analyses on the proposed method. Moreover, experiments are conducted to prove the feasibility of the proposed method for yielding high-resolution spectra in inhomogeneous magnetic fields.

  14. Comparison of reusable insulation systems for cryogenically-tanked earth-based space vehicles

    NASA Technical Reports Server (NTRS)

    Sumner, I. E.; Barber, J. R.

    1978-01-01

    Three reusable insulation systems concepts were developed for use with cryogenic tanks of earth-based space vehicles. Two concepts utilized double-goldized Kapton (DGK) or double-aluminized Mylar (DAM) multilayer insulation (MLI), while the third utilized a hollow-glass-microsphere, loadbearing insulation (LBI). Thermal performance measurements were made under space-hold (vacuum) conditions for insulating warm boundary temperatures of approximately 291 K. The resulting effective thermal conductivity was approximately 0.00008 W/m-K (W = weight,Kg; m = measured; K = temperature) for the MLI systems (liquid hydrogen test results) and 0.00054 W/m-K for the LBI system (liquid nitrogen test results corrected to liquid hydrogen temperature).

  15. Hyperbolic/parabolic development for the GIM-STAR code. [flow fields in supersonic inlets

    NASA Technical Reports Server (NTRS)

    Spradley, L. W.; Stalnaker, J. F.; Ratliff, A. W.

    1980-01-01

    Flow fields in supersonic inlet configurations were computed using the eliptic GIM code on the STAR computer. Spillage flow under the lower cowl was calculated to be 33% of the incoming stream. The shock/boundary layer interaction on the upper propulsive surface was computed including separation. All shocks produced by the flow system were captured. Linearized block implicit (LBI) schemes were examined to determine their application to the GIM code. Pure explicit methods have stability limitations and fully implicit schemes are inherently inefficient; however, LBI schemes show promise as an effective compromise. A quasiparabolic version of the GIM code was developed using elastical parabolized Navier-Stokes methods combined with quasitime relaxation. This scheme is referred to as quasiparabolic although it applies equally well to hyperbolic supersonic inviscid flows. Second order windward differences are used in the marching coordinate and either explicit or linear block implicit time relaxation can be incorporated.

  16. Development of Field Methodology and Processes for Task Analysis and Training Feedback

    DTIC Science & Technology

    1978-10-31

    RESEARCH NOTE JINAL RE PTt/ICQNTRACTIDAH 19-77-C-IO’ 0 DEVELOPMENIT OFFIELDETHODOLOGY AND PROCESSES FOR TASK ANALYSIS AND TRAINING FEEDBACK , . . =,l...by block numb.r) Training Maintenance Performance Work measurement Information feedback Task Analysis Interface analysis ABSTRACT (Conti ue on reve...side It neceary and Identify by block number) objective of the research effort was to develop a Training Feedback Management Information System. The

  17. Libya: Background and U.S. Relations

    DTIC Science & Technology

    2007-12-03

    within the limits of public interest and principles of the Revolution.” In practice , criticism of the government and Qadhafi are restricted and often...landscape in line with Qadhafi’s principles . These trends also helped Qadhafi and his supporters maintain political control. Overseas, Qadhafi promoted...Country Report on Human Rights Practices in Libya (March 6, 2007) and from Amnesty International [http://web.amnesty.org/library/eng-lby/index], and Human

  18. Review of Instrumentation and Monitoring for USACE Levees

    DTIC Science & Technology

    2014-08-01

    Levees By Joseph B. Dunbar, Gustavo Galan- Comas , Lucas A. Walshire, Ronald E. Wahl, Donald Yule, Maureen K. Corcoran, Jose Llopis, and Amber L...by Dr. Joseph B. Dunbar, Gustavo Galan- Comas , Lucas A. Walshire, Ronald E. Wahl, Donald Yule, Dr. Maureen K. Corcoran, Jose Llopis, and Amber L...and Coastal Storm Damage Reduction Program. This technical note should be cited as follows: Dunbar, J.B., G. Galan- Comas , L. A. Walshire, R. E. Wahl

  19. International Conference Post Failure Analysis Techniques for Fiber Reinforced Composites Held in Dayton, Ohio on 1-3 July 1985

    DTIC Science & Technology

    1991-07-01

    W. Bradley, Texas A&M University, College Station, Texas "Some Fractographic Investigations of Compressive ..... . . . . lB-I Failures in Carbon Fibre...tension and compression of unidirectional n60% volume fraction glass and carbon fibre reinforced epoxy resin composites have been investigated at...operated by tensile and compressive stresses, eg in fibres, on the one hand, and by shear stresses, eg in matrices, on the other. The atmospheric tensile

  20. Estimation of lumbar spinal loading and trunk muscle forces during asymmetric lifting tasks: application of whole-body musculoskeletal modelling in OpenSim.

    PubMed

    Kim, Hyun-Kyung; Zhang, Yanxin

    2016-06-03

    Large spinal compressive force combined with axial torsional shear force during asymmetric lifting tasks is highly associated with lower back injury (LBI). The aim of this study was to estimate lumbar spinal loading and muscle forces during symmetric lifting (SL) and asymmetric lifting (AL) tasks using a whole-body musculoskeletal modelling approach. Thirteen healthy males lifted loads of 7 and 12 kg under two lifting conditions (SL and AL). Kinematic data and ground reaction force data were collected and then processed by a whole-body musculoskeletal model. The results show AL produced a significantly higher peak lateral shear force as well as greater peak force of psoas major, quadratus lumborum, multifidus, iliocostalis lumborum pars lumborum, longissimus thoracis pars lumborum and external oblique than SL. The greater lateral shear forces combined with higher muscle force and asymmetrical muscle contractions may have the biomechanical mechanism responsible for the increased risk of LBI during AL. Practitioner Summary: Estimating lumbar spinal loading and muscle forces during free-dynamic asymmetric lifting tasks with a whole-body musculoskeletal modelling in OpenSim is the core value of this research. The results show that certain muscle groups are fundamentally responsible for asymmetric movement, thereby producing high lumbar spinal loading and muscle forces, which may increase risks of LBI during asymmetric lifting tasks.

  1. Comparison of reusable insulation systems for cryogenically-tanked earth-based space vehicles

    NASA Technical Reports Server (NTRS)

    Sumner, I. E.; Barber, J. R.

    1978-01-01

    Three reusable insulation systems concepts have been developed for use with cryogenic tanks of earth-based space vehicles. Two concepts utilized double-goldized Kapton (DGK) or double-aluminized Mylar (DAM) multilayer insulation (MLI), while the third utilized a hollow-glass-microsphere, load-bearing insulation (LBI). All three insulation systems have recently undergone experimental testing and evaluation under NASA-sponsored programs. Thermal performance measurements were made under space-hold (vacuum) conditions for insulation warm boundary temperatures of approximately 291 K. The resulting effective thermal conductivity was approximately .00008 W/m-K for the MLI systems (liquid hydrogen test results) and .00054 W/m-K for the LBI system (liquid nitrogen test results corrected to liquid hydrogen temperature). The DGK MLI system experienced a maximum thermal degradation of 38 percent, the DAM MLI system 14 percent, and the LBI system 6.7 percent due to repeated thermal cycling representing typical space flight conditions. Repeated exposure of the DAM MLI system to a high humidity environment for periods as long as 8 weeks provided a maximum degradation of only 24 percent.

  2. Synthesis and structure of N,C-chelated organoantimony(v) and organobismuth(v) compounds.

    PubMed

    Urbanová, Iva; Jambor, Roman; Růžička, Aleš; Jirásko, Robert; Dostál, Libor

    2014-01-14

    The reaction of N,C-intramolecularly coordinated organoantimony(iii) and organobismuth(iii) compounds LMCl2 (M = Sb () or Bi () and L = [o-(CH[double bond, length as m-dash]N-2,6-iPr2C6H3)C6H4]) with phenyllithium in a 1 : 1 or 1 : 2 molar ratio gave compounds LM(Ph)Cl (M = Sb () or Bi ()) and LMPh2 (M = Sb () or Bi ()) in moderate to good yields. Compound could also be prepared by the treatment of the lithium compound LLi with in situ prepared PhSbCl2. Oxidation of the antimony(iii) compounds , and with one equivalent of SO2Cl2 proceeded smoothly with formation of organoantimony(v) compounds LSbCl4 (), LSb(Ph)Cl3 () and LSbPh2Cl2 () in nearly quantitative yields. Compounds are yellowish solids that are stable for a long time even in the presence of air. In contrast, only organobismuth(iii) compounds and could be successfully oxidized using SO2Cl2 to give compounds LBi(Ph)Cl3 () and LBiPh2Cl2 (). Compound is stable, but compound readily decomposed in solution and could not be isolated and stored for a longer period. All attempts to prepare compound LBiCl4 by the oxidation of with SO2Cl2 failed and resulted only in a mixture of products. All studied compounds were characterized by electrospray ionization (ESI) mass spectrometry, and (1)H and (13)C NMR spectroscopy. The molecular structures of , and were unambiguously established using single-crystal X-ray diffraction analysis.

  3. Comparison of Growth Performance of Antibiotic-free Yorkshire Crossbreds Sired by Berkshire, Large Black, and Tamworth Breeds Raised in Hoop Structures.

    PubMed

    Whitley, N; Morrow, W E M; See, M T; Oh, S-H

    2012-10-01

    The objective of this study was to compare body weight, ADG, and feed:gain ratio of antibiotic-free pigs from Yorkshire dams and sired by Yorkshire (YY), Berkshire (BY), Large Black (LBY) or Tamworth (TY) boars. All the crossbred pigs in each of three trials were raised as one group from weaning to finishing in the same deep-bedded hoop, providing a comfortable environment for the animals which allowed rooting and other natural behaviors. Birth, weaning and litter weights were measured and recorded. From approximately 50 kg to market weight (125 kg), feed intake and body weights were recorded manually (body weight) or using a FIRE (Feed Intake Recording Equipment, Osborne Industries Inc. Osborne, Kansas) system with eight individual feeding stations. Feed intake data for 106 finishing pigs between 140 and 210 d of age and the resulting weights and feed conversion ratios were analyzed by breed type. Least square means for body weights (birth, weaning and to 240 d) were estimated with Proc Mixed in SAS 9.2 for fixed effects such as crossbreed and days of age within the sire breed. The differences within fixed effects were compared using least significant differences with DIFF option. Individual birth weights and weaning weights were influenced by sire breed (p<0.05). For birth weight, BY pigs were the lightest, TY and YY pigs were the heaviest but similar to each other and LBY pigs were intermediate. For weaning weights, BY and LBY pigs were heavier than TY and YY pigs. However, litter birth and weaning weights were not influenced by sire breed, and average daily gain was also not significantly different among breed types. Tamworth sired pigs had lower overall body weight gain, and feed conversion was lower in TY and YY groups than BY and LBY groups (p<0.05), however, number of observations was somewhat limited for feed conversion and for Tamworth pigs. Overall, no convincing differences among breed types were noted for this study, but growth performance in the

  4. Archeological and Historical Investigations Old Forsyth Site (23TA41) Taney County, Missouri,

    DTIC Science & Technology

    1987-12-01

    0068 US Army Corps -of Engineers icFL u ___Little Rock District o ARCHEOLOGICAL AND HISTORICAL INVESTIGATIONS OLD FORSYTH SITE (23TA4 1) ___A TANEY...Blakely DACW3-86-D-0068 9. PERFORMING ORG6ANIZATION HAMS AND ADDRESS 10. PRO4GRAM ELEMENT. PROJECT. TASK AR, CA & ORKC UNIT NUMBERS Archeological ...Mountains Historic Archeology Swan Creek Taney County irCivil War Bull Shoals Lake 20. ANSTRAC (ComiMimioi peyee ide U aecae mu m"Oddy lby eak esmube

  5. Air Force Environmental Management System Overview

    DTIC Science & Technology

    2011-05-01

    Key to ~:ning the environn ental portion of lbiJ vi ’lion i3 copcrot:oll41iling cnvirorunentlll monagcmcnt Air Force-wide. Operotiooa:tzl.o...approach for addressing environmental aspects of internal agency operations and activities”  For the AF, “appropriate facilities” equates to “major...y y y Authority 7. Communication y y y 16. Internal EMS Audit y y y 8. Documentation & y y y 17. Management Review y y y Doc Control 9

  6. Recrystallized thin-film silicon solar cell on graphite substrate with laser single side contact and hydrogen passivation

    NASA Astrophysics Data System (ADS)

    Li, Da; Wittmann, Stephan; Kunz, Thomas; Ahmad, Taimoor; Gawehns, Nidia; Hessmann, Maik T.; Ebser, Jan; Terheiden, Barbara; Auer, Richard; Brabec, Christoph J.

    2015-05-01

    Laser single side contact formation (LSSC) and the hydrogen passivation process are studied and developed for crystalline silicon thin film (CSiTF) solar cells on graphite substrates. The results demonstrate that these two methods can improve cell performance by increasing the open circuit voltage and fill factor. In comparison with our previous work, we have achieved an increase of 3.4% absolute cell efficiency for a 40 μm thick 4 cm2 aperture area silicon thin film solar cell on graphite substrate. Current density-voltage (J-V) measurement, quantum efficiency (QE) and light beam induced current (LBiC) are used as characterization methods.

  7. Airport Activity Statistics of Certificated Route Air Carriers, 1993

    DTIC Science & Technology

    1993-12-31

    PERU N 0.00 (ILLNOIS VALLEY REGIONAL) S IM M O N S ......................................................................................... TO TA L...By Aircraft Type 12 Months Ended December 31, 1993 TOTAL OEPARTIMES PBI <OWASTATE OK U.S. AEA TYPE OT w1A TIMCAIR OPOAF O00A 01110?MN)CFM0w " AIRCR1AFT...737-500 ............. 107 107 B-737-300 ............. 183 183 ALL TYPES ........... 8,058 431 8,489 8,302 PERU (ILLINOIS VALLEY REGIONAL

  8. Optical methods for correction of oxygen-transport characteristics of blood and their biomedical applications

    NASA Astrophysics Data System (ADS)

    Zalesskaya, G. A.; Akulich, N. V.; Marochkov, A. V.; Laskina, O. V.; Mit'kovskaya, N. P.

    2010-07-01

    We have carried out a comprehensive analysis of the spectral characteristics of blood and blood components, gas-exchange and oximetry parameters for venous and arterial blood, central hemodynamic parameters, and the results of a complete blood count and chemistry panel before and after extracorporeal UV irradiation of the blood (UBI, ultraviolet blood irradiation) or intravenous exposure of blood to low-intensity emission from an He-Ne laser (LBI, laser blood irradiation). We have demonstrated the possibility of correcting the oxygentransport characteristics of blood by laser optical methods based on photodissociation of blood oxyhemoglobin. We have shown that the therapeutic effects initiated both by UBI and LBI are based on a single mechanism: a change in the balance between production of active oxygen species and their inhibition by antioxidants. The data obtained are of interest not only for studying the primary (molecular) mechanisms of action for photohemotherapy and their effect on processes occurring in the living body, but also can provide a basis for designing next-generation laser optical instruments and for development of not yet existing methods for assessing the therapeutic efficacy of photohemotherapy.

  9. Emerging infectious disease or evidence of endemicity? A multi-season study of beak and feather disease virus in wild red-crowned parakeets (Cyanoramphus novaezelandiae).

    PubMed

    Jackson, Bethany; Varsani, Arvind; Holyoake, Carly; Jakob-Hoff, Richard; Robertson, Ian; McInnes, Kate; Empson, Raewyn; Gray, Richard; Nakagawa, Kahori; Warren, Kristin

    2015-09-01

    Beak and feather disease virus (BFDV) is a single-stranded DNA virus that is the etiological agent of beak and feather disease in both wild and captive parrots. Given that BFDV is globally recognized as a conservation threat for wild parrots, between 2011-2013, red-crowned parakeets (Cyanoramphus novaezelandiae, n = 229), which are endemic to New Zealand, were captured in mist nets on Tiritiri Matangi Island and Hauturu-o-Toi/Little Barrier Island (LBI), New Zealand, for disease surveillance. Blood and feathers from all birds were tested by PCR for BFDV, and full genomes were recovered and sequenced. A subset of blood samples (n = 96) were tested for antibodies to BFDV by the haemagglutination inhibition (HI) test. A further 238 feather samples were obtained from red-crowned parakeets from three sites in the Wellington region of the North Island, and these were screened for BFDV. The DNA-based prevalence of BFDV infection determined on Tiritiri Matangi Island was 1.09% (CI 95 %, 0.1-3.9%); on Hauturu-o-Toi/LBI, 4.4% (95% CI, 0.5%-15.1%); on Kapiti Island, 3.4% (CI 95%, 1.1-7.8%); at the ZEALANDIA-Karori sanctuary, 1.6% (95% CI, 0-8.4%); and on Matiu-Somes Island, 0% (CI 95%, 0-12.3%). Seroprevalence for BFDV, indicating prior or current exposure, in the Tiritiri Matangi Island population, it was 2% (CI 95%, 0-10.1%), and in the Hauturu-o-Toi/LBI population was 14% (CI 95%, 5.3-27.9%). BFDV-positive birds showed no signs of clinical disease, with the exception of an individual bird obtained opportunistically from Shakespear Regional Park during the study period, which had classical signs of feather loss. Phylogenetic analysis of the 11 full genome sequences recovered from BFDV-positive red-crowned parakeets revealed evidence of ongoing viral flow between red-crowned parakeets and eastern rosellas (Platycercus eximius) in the Hauraki Gulf/Auckland region, with separate but closely related strains from the Wellington region of the North Island. This is the first study

  10. Seasonal thermal energy storage in unsaturated soils: Model development and field validation

    SciTech Connect

    Doughty, C.; Nir, Aharon, Tsang, Chin-Fu

    1991-06-01

    This report summarizes ten years of activity carried out at the Earth Sciences Division of the Lawrence Berkeley Laboratory (LBI) in the subject of seasonal storage of thermal energy in unsaturated soils. The objectives of the work were to make a conceptual study of this type of storage, to offer guidelines for planning and evaluation of the method, to produce models and simulation for an actual field experiment, to participate in an on-line data analysis of experimental results. and to evaluate the results in terms of the validation of the concept, models and the experimental techniques. The actual field experiments were performed in Beer-Sheva, Israel. Details of engineering and field operations are not included in this report.

  11. Static Force and Moment Test of the Holloman Narrow-Gage Rocket Sled at Mach Numbers from 3.5 to 5.5.

    DTIC Science & Technology

    1987-09-01

    N 4NN Lc t- * * -~~ c. 2 0 0 a CL v W" *7 m V4 r4 𔃾A r4N r14.O 4 .F- X .b .b . .. CC!I a. . . -t- 9.9.. L2 In V Lobbl Ul dd lbI a.. 0. 418n nInI - F...00 0 U2 *SSSIC d in cot N 4r ~ 0 ~300 00 00 NI , 61’ AinI *V- -n r-0. wo W) a, C𔃾N 4-~~ O0 0 Uk r. In 0 0 01000c 100 ninI u I- CLa a *Z * 4a 4 C4 t

  12. Inactivation of BRCA2 in human cancer cells identifies a subset of tumors with enhanced sensitivity towards death receptormediated apoptosis

    PubMed Central

    De Toni, Enrico N.; Ziesch, Andreas; Rizzani, Antonia; Török, Helga-Paula; Hocke, Sandra; Lü, Shuai; Wang, Shao-Chun; Hucl, Tomas; Göke, Burkhard; Bruns, Christiane; Gallmeier, Eike

    2016-01-01

    Purpose DNA repair defects due to detrimental BRCA2-mutations confer increased susceptibility towards DNA interstrand-crosslinking (ICL) agents and define patient subpopulations for individualized genotype-based cancer therapy. However, due to the side effects of these drugs, there is a need to identify additional agents, which could be used alone or in combination with ICL-agents. Therefore, we investigated whether BRCA2-mutations might also increase the sensitivity towards TRAIL-receptors (TRAIL-R)-targeting compounds. Experimental design Two independent model systems were applied: a BRCA2 gene knockout and a BRCA2 gene complementation model. The effects of TRAIL-R-targeting compounds and ICL-agents on cell viability, apoptosis and cell cycle distribution were compared in BRCA2-proficient versus-deficient cancer cells in vitro. In addition, the effects of the TRAIL-R2-targeting antibody LBY135 were assessed in vivo using a murine tumor xenograft model. Results BRCA2-deficient cancer cells displayed an increased sensitivity towards TRAIL-R-targeting agents. These effects exceeded and were mechanistically distinguishable from the well-established effects of ICL-agents. In vitro, ICL-agents expectedly induced an early cell cycle arrest followed by delayed apoptosis, whereas TRAIL-R-targeting compounds caused early apoptosis without prior cell cycle arrest. In vivo, treatment with LBY135 significantly reduced the tumor growth of BRCA2-deficient cancer cells in a xenograft model. Conclusions BRCA2 mutations strongly increase the in vitro- and in vivo-sensitivity of cancer cells towards TRAIL-R-mediated apoptosis. This effect is mechanistically distinguishable from the well-established ICL-hypersensitivity of BRCA2-deficient cells. Our study thus defines a new genetic subpopulation of cancers susceptible towards TRAIL-R-targeting compounds, which could facilitate novel therapeutic approaches for patients with BRCA2-deficient tumors. PMID:26843614

  13. Bio-inspired transition metal-organic hydride conjugates for catalysis of transfer hydrogenation: experiment and theory.

    PubMed

    McSkimming, Alex; Chan, Bun; Bhadbhade, Mohan M; Ball, Graham E; Colbran, Stephen B

    2015-02-09

    Taking inspiration from yeast alcohol dehydrogenase (yADH), a benzimidazolium (BI(+) ) organic hydride-acceptor domain has been coupled with a 1,10-phenanthroline (phen) metal-binding domain to afford a novel multifunctional ligand (L(BI+) ) with hydride-carrier capacity (L(BI+) +H(-) ⇌L(BI) H). Complexes of the type [Cp*M(L(BI) )Cl][PF6 ]2 (M=Rh, Ir) have been made and fully characterised by cyclic voltammetry, UV/Vis spectroelectrochemistry, and, for the Ir(III) congener, X-ray crystallography. [Cp*Rh(L(BI) )Cl][PF6 ]2 catalyses the transfer hydrogenation of imines by formate ion in very goods yield under conditions where the corresponding [Cp*Ir(L(BI) )Cl][PF6 ] and [Cp*M(phen)Cl][PF6 ] (M=Rh, Ir) complexes are almost inert as catalysts. Possible alternatives for the catalysis pathway are canvassed, and the free energies of intermediates and transition states determined by DFT calculations. The DFT study supports a mechanism involving formate-driven RhH formation (90 kJ mol(-1) free-energy barrier), transfer of hydride between the Rh and BI(+) centres to generate a tethered benzimidazoline (BIH) hydride donor, binding of imine substrate at Rh, back-transfer of hydride from the BIH organic hydride donor to the Rh-activated imine substrate (89 kJ mol(-1) barrier), and exergonic protonation of the metal-bound amide by formic acid with release of amine product to close the catalytic cycle. Parallels with the mechanism of biological hydride transfer in yADH are discussed.

  14. Large-scale, high-definition Ground Penetrating Radar prospection in archaeology

    NASA Astrophysics Data System (ADS)

    Trinks, I.; Kucera, M.; Hinterleitner, A.; Löcker, K.; Nau, E.; Neubauer, W.; Zitz, T.

    2012-04-01

    The future demands on professional archaeological prospection will be its ability to cover large areas in a time and cost efficient manner with very high spatial resolution and accuracy. The objective of the 2010 in Vienna established Ludwig Boltzmann Institute for Archaeological Prospection and Virtual Archaeology (LBI ArchPro) in collaboration with its eight European partner organisations is the advancement of state-of-the-art archaeological sciences. The application and specific further development of remote sensing, geophysical prospection and virtual reality applications, as well as of novel integrated interpretation approaches dedicated to non-invasive spatial archaeology combining near-surface prospection methods with advanced computer science is crucial for modern archaeology. Within the institute's research programme different areas for distinct case studies in Austria, Germany, Norway, Sweden and the UK have been selected as basis for the development and testing of new concepts for efficient and universally applicable tools for spatial, non-invasive archaeology. In terms of geophysical prospection the investigation of entire archaeological landscapes for the exploration and protection of Europe's buried cultural heritage requires new measurement devices, which are fast, accurate and precise. Therefore the further development of motorized, multichannel survey systems and advanced navigation solutions is required. The use of motorized measurement devices for archaeological prospection implicates several technological and methodological challenges. Latest multichannel Ground Penetrating Radar (GPR) arrays mounted in front off, or towed behind motorized survey vehicles permit large-scale GPR prospection surveys with unprecedented spatial resolution. In particular the motorized 16 channel 400 MHz MALÅ Imaging Radar Array (MIRA) used by the LBI ArchPro in combination with latest automatic data positioning and navigation solutions permits the reliable high

  15. Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities.

    PubMed

    Parveen, Bushra; Reveilliez, Jean-Philippe; Mary, Isabelle; Ravet, Viviane; Bronner, Gisèle; Mangot, Jean-François; Domaizon, Isabelle; Debroas, Didier

    2011-09-01

    The diversity of attached and free-living Actinobacteria and Betaproteobacteria, based on 16S rRNA gene sequences, was investigated in a mesotrophic lake during two periods of contrasting phytoplankton dominance. Comparison analyses showed a phylogenetic difference between attached and free-living communities for the two bacterial groups. For Betaproteobacteria, the betaI clade was detected at all sampling dates in free-living and attached bacterial communities and was the dominant clade contributing to 57.8% of the total retrieved operational taxonomic units (OTUs). For Actinobacteria, the acIV cluster was found to be dominant, followed by acI contributing to 45% and 25% of the total retrieved OTUs, respectively. This study allows the determination of eight new putative clades among the Betaproteobacteria termed lbI-lbVIII and a new putative clade named acLBI belonging to the Actinobacteria. The seasonal dynamics of phytoplankton and zooplankton communities have been reflected as changes in distinct bacterial phylotypes for both attached and free-living communities. For attached communities, relationships were observed between Actinobacteria and Chrysophyceae, and between Betaproteobacteria and Dinophyceae and Chlorophyceae biomass. On the other hand, within free-living communities, few actinobacterial clades were found to be dependent on either nutrients or phytoplankton communities, whereas Betaproteobacteria were mainly associated with biological parameters (i.e. phytoplankton and copepod communities).

  16. Deep drilling of silica glass by continuous-wave laser backside irradiation

    NASA Astrophysics Data System (ADS)

    Hidai, Hirofumi; Saito, Namiko; Matsusaka, Souta; Chiba, Akira; Morita, Noboru

    2016-04-01

    We propose a novel method for drilling of silica glass based on the continuous-wave laser backside irradiation (CW-LBI) phenomenon. The method allows drilling to be performed by single-shot irradiation using a CW laser. A spindle-shaped emission is generated in the bulk glass and is then guided to the glass surface, and at the instant that the beam reaches the surface, the glass material is ejected. The glass ejection process occurs for a time of ~250 μs. A hole that is similar in shape to that of the spindle-shaped emission is left. The hole length tended to increase linearly with increasing laser power. The laser power dependence of the spindle-shaped emission propagation velocity is also linear, and the velocity increases with increasing laser power. The hole diameters were smaller in the case where the laser focus position was set on the glass surface, and these diameters increased with increasing defocusing. The maximum hole depth reached more than 5 mm. Through-hole drilling was demonstrated using a 3-mm-thick glass substrate.

  17. Bioactive secondary metabolites of a marine Bacillus sp. inhibit superoxide generation and elastase release in human neutrophils by blocking formyl peptide receptor 1.

    PubMed

    Yang, Shun-Chin; Lin, Chwan-Fwu; Chang, Wen-Yi; Kuo, Jimmy; Huang, Yin-Ting; Chung, Pei-Jen; Hwang, Tsong-Long

    2013-06-03

    It is well known that overwhelming neutrophil activation is closely related to acute and chronic inflammatory injuries. Formyl peptide receptor 1 (FPR1) plays an important role in activation of neutrophils and may represent a potent therapeutic target in inflammatory diseases. In the present study, we demonstrated that IA-LBI07-1 (IA), an extract of bioactive secondary metabolites from a marine Bacillus sp., has anti-inflammatory effects in human neutrophils. IA significantly inhibited superoxide generation and elastase release in formyl-L-methionyl-L-leucyl-L-phenylalanine (FMLP)-activated neutrophils, but failed to suppress the cell responses activated by non-FPR1 agonists. IA did not alter superoxide production and elastase activity in cell-free systems. IA also attenuated the downstream signaling from FPR1, such as the Ca2+, MAP kinases and AKT pathways. In addition, IA inhibited the binding of N-formyl-Nle-Leu-Phe-Nle-Tyr-Lys-fluorescein, a fluorescent analogue of FMLP, to FPR1 in human neutrophils and FPR1-transfected HEK293 cells. Taken together, these results show that the anti-inflammatory effects of IA in human neutrophils are through the inhibition of FPR1. Also, our data suggest that IA may have therapeutic potential to decrease tissue damage induced by human neutrophils.

  18. Biodegradability of commercial and weathered diesel oils

    PubMed Central

    Mariano, Adriano Pinto; Bonotto, Daniel Marcos; de Franceschi de Angelis, Dejanira; Pirôllo, Maria Paula Santos; Contiero, Jonas

    2008-01-01

    This work aimed to evaluate the capability of different microorganisms to degrade commercial diesel oil in comparison to a weathered diesel oil collected from the groundwater at a petrol station. Two microbiological methods were used for the biodegradability assessment: the technique based on the redox indicator 2,6 -dichlorophenol indophenol (DCPIP) and soil respirometric experiments using biometer flasks. In the former we tested the bacterial cultures Staphylococcus hominis, Kocuria palustris, Pseudomonas aeruginosa LBI, Ochrobactrum anthropi and Bacillus cereus, a commercial inoculum, consortia obtained from soil and groundwater contaminated with hydrocarbons and a consortium from an uncontaminated area. In the respirometric experiments it was evaluated the capability of the native microorganisms present in the soil from a petrol station to biodegrade the diesel oils. The redox indicator experiments showed that only the consortia, even that from an uncontaminated area, were able to biodegrade the weathered diesel. In 48 days, the removal of the total petroleum hydrocarbons (TPH) in the respirometric experiments was approximately 2.5 times greater when the commercial diesel oil was used. This difference was caused by the consumption of labile hydrocarbons, present in greater quantities in the commercial diesel oil, as demonstrated by gas chromatographic analyses. Thus, results indicate that biodegradability studies that do not consider the weathering effect of the pollutants may over estimate biodegradation rates and when the bioaugmentation is necessary, the best strategy would be that one based on injection of consortia, because even cultures with recognised capability of biodegrading hydrocarbons may fail when applied isolated. PMID:24031193

  19. Synthesis and structural characterization of heteroboroxines with MB2O3 core (M = Sb, Bi, Sn).

    PubMed

    Mairychová, Barbora; Svoboda, Tomáš; Štěpnička, Petr; Růžička, Aleš; Havenith, Remco W A; Alonso, Mercedes; De Proft, Frank; Jambor, Roman; Dostál, Libor

    2013-02-04

    Reaction of organoantimony and organobismuth oxides (LSbO)(2) and (LBiO)(2) (where L is [2,6-bis(dimethylamino)methyl]phenyl) with four equivalents of the organoboronic acids gave new heteroboroxines LM[(OBR)(2)O] 1a-2c (for M = Sb: R = Ph (1a), 4-CF(3)C(6)H(4) (1b), ferrocenyl (1c); for M = Bi: R = Ph (2a), 4-CF(3)C(6)H(4) (2b), and ferrocenyl (2c)). Analogously, reaction between organotin carbonate L(Ph)Sn(CO(3)) and two equivalents of organoboronic acids yielded compounds L(Ph)Sn[(OBR)(2)O] (where R = Ph (3a), 4-CF(3)C(6)H(4) (3b), and ferrocenyl (3c)). All compounds were characterized by elemental analysis and NMR spectroscopy. Their structure was described both in solution (NMR studies) and in the solid state (X-ray diffraction analyses 1a, 1c, 2b, 3b, and 3c). All compounds contain a central MB(2)O(3) core (M = Sb, Bi, Sn), and the bonding situation within these rings and their potential aromaticity was investigated by the help of computational methods.

  20. Loss of cytochrome cM stimulates cyanobacterial heterotrophic growth in the dark.

    PubMed

    Hiraide, Yuto; Oshima, Kenshiro; Fujisawa, Takatomo; Uesaka, Kazuma; Hirose, Yuu; Tsujimoto, Ryoma; Yamamoto, Haruki; Okamoto, Shinobu; Nakamura, Yasukazu; Terauchi, Kazuki; Omata, Tatsuo; Ihara, Kunio; Hattori, Masahira; Fujita, Yuichi

    2015-02-01

    Although cyanobacteria are photoautotrophs, they have the capability for heterotrophic metabolism that enables them to survive in their natural habitat. However, cyanobacterial species that grow heterotrophically in the dark are rare. It remains largely unknown how cyanobacteria regulate heterotrophic activity. The cyanobacterium Leptolyngbya boryana grows heterotrophically with glucose in the dark. A dark-adapted variant dg5 isolated from the wild type (WT) exhibits enhanced heterotrophic growth in the dark. We sequenced the genomes of dg5 and the WT to identify the mutation(s) of dg5. The WT genome consists of a circular chromosome (6,176,364 bp), a circular plasmid pLBA (77,793 bp) and two linear plasmids pLBX (504,942 bp) and pLBY (44,369 bp). Genome comparison revealed three mutation sites. Phenotype analysis of mutants isolated from the WT by introducing these mutations individually revealed that the relevant mutation is a single adenine insertion causing a frameshift of cytM encoding Cyt c(M). The respiratory oxygen consumption of the cytM-lacking mutant grown in the dark was significantly higher than that of the WT. We isolated a cytM-lacking mutant, ΔcytM, from another cyanobacterium Synechocystis sp. PCC 6803, and ΔcytM grew in the dark with a doubling time of 33 h in contrast to no growth of the WT. The respiratory oxygen consumption of ΔcytM grown in the dark was about 2-fold higher than that of the WT. These results suggest a suppressive role(s) for Cyt cM in regulation of heterotrophic activity.

  1. Dispensability of the [4Fe-4S] cluster in novel homologues of adenine glycosylase MutY.

    PubMed

    Trasviña-Arenas, Carlos H; Lopez-Castillo, Laura M; Sanchez-Sandoval, Eugenia; Brieba, Luis G

    2016-02-01

    7,8-Dihydro-8-deoxyguanine (8oG) is one of the most common oxidative lesions in DNA. DNA polymerases misincorporate an adenine across from this lesion. Thus, 8oG is a highly mutagenic lesion responsible for G:C→T:A transversions. MutY is an adenine glycosylase, part of the base excision repair pathway that removes adenines, when mispaired with 8oG or guanine. Its catalytic domain includes a [4Fe-4S] cluster motif coordinated by cysteinyl ligands. When this cluster is absent, MutY activity is depleted and several studies concluded that the [4Fe-4S] cluster motif is an indispensable component for DNA binding, substrate recognition and enzymatic activity. In the present study, we identified 46 MutY homologues that lack the canonical cysteinyl ligands, suggesting an absence of the [4Fe-4S] cluster. A phylogenetic analysis groups these novel MutYs into two different clades. One clade is exclusive of the order Lactobacillales and another clade has a mixed composition of anaerobic and microaerophilic bacteria and species from the protozoan genus Entamoeba. Structural modeling and sequence analysis suggests that the loss of the [4Fe-4S] cluster is compensated by a convergent solution in which bulky amino acids substitute the [4Fe-4S] cluster. We functionally characterized MutYs from Lactobacillus brevis and Entamoeba histolytica as representative members from each clade and found that both enzymes are active adenine glycosylases. Furthermore, chimeric glycosylases, in which the [4Fe-4S] cluster of Escherichia coli MutY is replaced by the corresponding amino acids of LbY and EhY, are also active. Our data indicates that the [4Fe-4S] cluster plays a structural role in MutYs and evidences the existence of alternative functional solutions in nature.

  2. Straightforward synthesis of novel cyclic metallasiloxanes supported by an N,C,N-chelating ligand.

    PubMed

    Fridrichová, Adéla; Mairychová, Barbora; Padělková, Zdeňka; Lyčka, Antonín; Jurkschat, Klaus; Jambor, Roman; Dostál, Libor

    2013-12-14

    The reaction of an N,C,N-intramolecularly coordinated tin(IV) carbonate LSn(Ph)(CO3) (1) and antimony(III) and bismuth(III) oxides (LMO)2 (where M = Sb (2), Bi (3) and L = C6H3-2,6-(CH2NMe2)2) with (HO)SiPh2(O)SiPh2(OH) in 1 : 1 (in the case of 1) or 1 : 2 molar ratio (in the cases of 2 and 3) gave the metallasiloxanes cyclo-LSn(Ph)(OSiPh2)2O (4) and cyclo-LM(OSiPh2)2O (where M = Sb (6) and Bi (7)) containing six-membered MSi2O3 rings. Alternatively, the compounds 4, 6 and 7 can be also prepared reacting Ph2Si(OH)2 and compounds 1, 2 and 3, respectively, in the molar ratio of either 2 : 1 (for 4) or 4 : 1 (for 6 and 7). The reaction of Ph2Si(OH)2 with 1 in 1 : 1 molar ratio gave cyclo-Ph2Si(OSnL(Ph)O)2SiPh2 (5) containing an eight-membered Sn2Si2O4 stannasiloxane ring. The analogous eight-membered stibasiloxane derivative cyclo-Ph2Si(OSbLO)2SiPh2 (8) was obtained as well, while attempts to synthesize the bismuth analogue failed. Compounds 1-3 react with the siloxane cyclo-(Me2SiO)3 providing either eight-membered metallasiloxanes cyclo-LSn(Ph)(OSiMe2O)2SiMe2 (9) and cyclo-LSb(OSiMe2O)2SiMe2 (10) or the six-membered bismutasiloxane cyclo-LBi(OSiMe2)2O (11). All compounds were characterized with the help of elemental analysis, (1)H, (13)C, (29)Si and (119)Sn NMR spectroscopy, and single crystal X-ray diffraction analyses (except 9 and 10).

  3. United States Naval Academy Polar Science Program's Visual Arctic Observing Buoys; The IceGoat

    NASA Astrophysics Data System (ADS)

    Woods, J. E.; Clemente-Colon, P.; Nghiem, S. V.; Rigor, I.; Valentic, T. A.

    2012-12-01

    frosting on the camera during these same periods indicating that the anemometer has temporarily frozen up. Later when the camera lens clears, the anemometers resume providing reasonable wind speeds. The cameras have also provided confirmation of the onset of melt and freeze, and indications of cloudy and clear skies. USNA PSP will monitor meteorological and oceanographic parameters of the Arctic environment remotely via its own buoys. Web cameras will provide near real time visual observations of the buoys current positions, allowing for instant validation of other remotes sensors and modeled data. Each buoy will be developed with at a minimum a meteorological sensor package in accordance with IABP protocol (2m Air Temp, SLP). Platforms will also be developed with new sensor packages to possibly include, wind speed, ice temperature, sea ice thickness, underwater acoustics, and new communications suites (Iridium, Radio). The uniqueness of the IceGoat is that it is based on the new AXIB buoy designed by LBI, Inc. that has a proven record of being able to survive in the harsh marginal ice zone environment. IceGoat1 will be deployed in the High Arctic during the USCGC HEALY cruise in late August 2012.