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Sample records for par diffraction neutronique

  1. Études par diffraction de fibres de l'ADN double brin

    NASA Astrophysics Data System (ADS)

    Forsyth, V. T.; Parrot, I. M.

    2005-11-01

    L'état fibreux est un état naturel pour les molécules de polymère qui ont tendance à adopter des conformations hélicoïdales régulières plutôt que des structures globulaires caractéristiques à de nombreuses protéines. La diffraction de fibres a donc une application étendue pour l'étude d'une grande variété de polymères biologiques et synthétiques. Ce papier a pour objectif d'illustrer l'étendue générale de la méthode et, en particulier, de démontrer l'impact des sources modernes de rayonnement synchrotron et de faisceaux neutroniques.

  2. Methodes iteratives paralleles: Applications en neutronique et en mecanique des fluides

    NASA Astrophysics Data System (ADS)

    Qaddouri, Abdessamad

    Dans cette these, le calcul parallele est applique successivement a la neutronique et a la mecanique des fluides. Dans chacune de ces deux applications, des methodes iteratives sont utilisees pour resoudre le systeme d'equations algebriques resultant de la discretisation des equations du probleme physique. Dans le probleme de neutronique, le calcul des matrices des probabilites de collision (PC) ainsi qu'un schema iteratif multigroupe utilisant une methode inverse de puissance sont parallelises. Dans le probleme de mecanique des fluides, un code d'elements finis utilisant un algorithme iteratif du type GMRES preconditionne est parallelise. Cette these est presentee sous forme de six articles suivis d'une conclusion. Les cinq premiers articles traitent des applications en neutronique, articles qui representent l'evolution de notre travail dans ce domaine. Cette evolution passe par un calcul parallele des matrices des PC et un algorithme multigroupe parallele teste sur un probleme unidimensionnel (article 1), puis par deux algorithmes paralleles l'un mutiregion l'autre multigroupe, testes sur des problemes bidimensionnels (articles 2--3). Ces deux premieres etapes sont suivies par l'application de deux techniques d'acceleration, le rebalancement neutronique et la minimisation du residu aux deux algorithmes paralleles (article 4). Finalement, on a mis en oeuvre l'algorithme multigroupe et le calcul parallele des matrices des PC sur un code de production DRAGON ou les tests sont plus realistes et peuvent etre tridimensionnels (article 5). Le sixieme article (article 6), consacre a l'application a la mecanique des fluides, traite la parallelisation d'un code d'elements finis FES ou le partitionneur de graphe METIS et la librairie PSPARSLIB sont utilises.

  3. Diffusion, diffraction des neutrons en temps réel et études réalisées in situ

    NASA Astrophysics Data System (ADS)

    Isnard, O.

    2003-02-01

    La diffusion des neutrons est une technique particulièrement efficace pour l'analyse en temps réel des processus réactionnels dans la matière. La diffraction de neutrons in situ a été développée très tôt sur les sources à haut flux tel que l'Institut Laue Langevin. Ces études nécessitent un flux de neutrons important et un détecteur couvrant un domaine angulaire le plus grand possible. Les neutrons offrent la spécificité d'être très peu absorbés par nombre de matériaux, cette faible absorption fait de la diffusion neutronique un excellent outil pour sonder la matière en volume et de manière non destructive. Cela permet en particulier d'utiliser des environnements d'échantillons complexes tout en conservant un flux raisonnable. La diffusion de neutrons en temps réel est donc très largement utilisée par diverses communautés scientifiques : sciences des matériaux, physiciens, chimistes... L'objet de ce cours est de donner les paramètres importants pour ce type d'étude et d'illustrer le propos à l'aide d'exemples pris dans des domaines scientifiques divers : électrochimie, magnétisme, métallurgie, chimie du solide. Après avoir présenté quelques repères méthodologiques sur les méthodes d'acquisition de données, des exemples montreront le fort potentiel de la diffusion neutronique en temps réel pour l'étude de la matière dans des conditions dynamiques. Enfin, nous donnerons aussi quelques conseils pour la visualisation, le dépouillement et l'analyse de ce type d'expérience. La diffusion des neutrons sur poudre est actuellement très bien adaptée aux études réalisées in situ. Cependant, nous verrons que la faisabilité d'études in situ s'étend à d'autres techniques expérimentales telles que la diffusion des neutrons aux petits angles et même la diffusion sur monocristal qui est en plein renouveau.

  4. Caractérisation des effets de l'implantation ionique dans les alliages super-élastiques nickel titane par diffraction des rayons X

    NASA Astrophysics Data System (ADS)

    Pelletier, H.; Muller, D.; Grob, J. J.; Mille, P.; Cornet, A.

    2002-07-01

    the specific properties (shape memory effect and super-elasticity) of NiTi alloys have provided the enabling technology for many groundbreaking applications in the medical and dentistry industries. These applications include everything from the surgical tools to permanent implants. Super-elastic NiTi alloys take advantage of a stress induced martensitic transformation to achieve incredible amounts of flexibility. This last property represents the most interesting aspect of such alloys for restoration procedures. However, recent instrumentation tests have shown brittle rupture of endodontic instruments inside the tooth during preparation of dental root channels.To improve the mechanical properties of NiTi endodontic instruments, argon, nitrogen and boron implantations at different energies and at fixed dose (1.10^{17} at.cm^{-2}) have been used. In this paper, we have investigated the effects on NiTi microstructure, especially the crystalline to amorphous transition induced by ion bombardment, using Grazing Incidence X-ray Diffraction (GIXRD). Nano-indentation tests have also been performed to determine hardness H and elastic modulus E of implanted surfaces as a function of ion species and energy. Le but de cette d'étude est de caractériser les effets de l'implantation ionique sur la microstructure d'un alliage Nickel Titane à l'aide de la diffraction des rayons X en incidence rasante. Nous avons réalisé différents types d'implantation en faisant varier l'espèce implantée (bore, azote, argon) ainsi que l'énergie d'implantation, pour des doses d'implantation de l'ordre de 1.10^{17} at.cm^{-2}. Les résultats des mesures de diffraction sous différents angles d'incidence (0{,}5^circ leq α_ileq 6^circ) ont été corrélés avec les différents profils d'implantation simulés. Des tests de nanoindentation ainsi que des mesures de RBS ont été également réalisés. Après implantation, on observe la formation d'une couche amorphe, conduisant à une

  5. Analyse de la formation des phases du systeme cuivre-germanium par diffraction des rayons X sur des echantillons d'epaisseur nanoscopique

    NASA Astrophysics Data System (ADS)

    Aubin, Alexandre

    With the miniaturization of electronic devices, driven by cost reduction and performance increase, new materials have to be introduced in their fabrication process to solve many emerging problems. These challenges are brought forth by the ITRS (International Technology Roadmap for Semiconductors), a comity in charge of listing the technological needs for the upcoming generations of integrated circuits. Many fields of interest require new technological developments, from global to local interconnections, the transistor gate, the gate insulator thickness, etc. One of the major challenges mentioned in the ITRS roadmap is the need for a new interconnection material. Indeed, the need for a diffusion barrier for the copper lines in local and global interconnections of integrated circuits, the main technology in today's devices, is becoming more hindering with the decrease of the metallization lines. cross-section. In the 90's, a binary compound of copper and germanium, known as the epsilon1-Cu3Ge phase, was investigated as a replacement for aluminum because of its low resistivity, that can reach as low as 5.5muO·cm [1], its stability in contact with both silicon and silicon oxide [2] as well as its thermal stability during anneals [3]. However, copper proved to be a better choice at the time because of its low bulk resistivity of 1.68muO·cm at room temperature[4]. The objective of this master thesis is to re-examine the copper-germanium system, and more specifically the epsilon1-Cu3Ge, for future applications in the microelectronics industry. Different X ray diffraction techniques were used to obtain more information on the system, including in situ X ray diffraction during 3°C/s anneals in an inert helium atmosphere with simultaneous resistance measurement, theta-2theta scans to detect diffraction peaks of the present phases after sample quenching as well as partial acquisition of the reciprocal space of quenched samples which allowed to obtain pole figures for d

  6. L'analyse par activation de neutrons de réacteur

    NASA Astrophysics Data System (ADS)

    Meyer, G.

    2003-02-01

    Quand les neutrons traversent la matière, certains sont transmis sans interaction, les autres interagissent avec le milieu traversé par diffusion et par absorption. Ce phénomène d'absorption est utilisé pour se protéger des neutrons, mais aussi pour les détecter; il peut également être utilisé pour identifier les noyaux “absorbants" et ainsi analyser le milieu traversé. En effet par différentes réactions nucléaires (n,γ), (n,p), (n,α), (n,fission), on obtient des noyaux résiduels qui sont souvent radioactifs; on dit que l'échantillon est “activé". Si l'on connaît le rendement d'activation et donc le pourcentage de noyaux ainsi “transmutés", les mesures de radioactivité induite vont permettre de déterminer la composition de l'échantillon irradié. Cette méthode dite d'analyse par activation neutronique est pratiquée depuis la découverte du neutron. Elle a permis grâce à sa sélectivité et à sa sensibilité d'avoir accès au domaine des traces et des ultra-traces dans des champs d'application très divers comme la métallurgie, l'archéologie, la biologie, la géochimie etc...

  7. De Par en Par (Wide Open), 1993.

    ERIC Educational Resources Information Center

    De Par en Par, 1993

    1993-01-01

    This document consists of the four issues of the serial "De Par en Par" published during 1993. This serial provides lessons in Spanish for elementary school children. It is written by bilingual education teachers for use in the bilingual classroom. The magazine bases itself on the K-6 curriculum and offers a variety of activities for classroom…

  8. Pars Injuries in Athletes.

    PubMed

    Oren, Jonathan H; Gallina, Jason M

    2016-03-01

    Pars injuries are common causes of low back pain in adolescent athletes. Workup traditionally has included lumbar radiographs with oblique views and single-photon emission computed tomography (SPECT). However, recent literature has demonstrated the accuracy of MRI as a diagnostic modality. Acute injuries may be amenable to bracing with the goal of a healed lesion. Most cases of spondylolysis will result in asymptomatic non-union, though pars repair is an option for symptomatic pars defects without spondylolisthesis. PMID:26977552

  9. Etude de l'effet de la température de dépôt ou de recuit sur la formation de l'interface Au/GaSb(100) par diffraction d'électrons lents et spectroscopies d'électrons Auger ou de pertes d'énergies

    NASA Astrophysics Data System (ADS)

    Rouanet, M.; Oueini, W.; Nouaoura, M.; Bertru, N.; Bonnet, J.; Lassabatere, L.

    1995-05-01

    Auger electron spectroscopy (AES), energy electron loss spectroscopy (EELS) and low energy electron diffraction (LEED) are used to precise the interaction of gold with GaSb(100) surfaces grown on GaSb substrates by molecular beam epitaxy (MBE). After the growth, the GaSb layers, produced in the laboratory, were transferred by the mean of an ultra vacuum lock chamber, into an other ultra vacuum devoted to the deposit of gold and to the physical studies. Measurements were first performed on the clean surfaces and then on surfaces covered by increasing amounts of gold (6 × 10^{13} 1.8 × 10^{16} atoms cm^{-2}) deposited on substrates brought at room temperature or at low temperature (220 K). The samples were then studied during the annealing up to 520 K. The results show, at the beginning of the deposition, gold was adsorbed on the MBE GaSb(100) surface. When the gold coverage increases and becomes higher than 10^{15} atomes cm^{-2}, Au diffuses into the bulk and forms alloys. Nous étudions par spectroscopie d'électrons Auger (SEA), spectroscopie de pertes d'énergies d'électrons lents (SPEEL) et diffraction d'électrons lents (DEL), l'adsorption de l'or sur des surfaces (100) de couches de GaSb obtenues au laboratoire par épitaxie par jets moléculaires (EJM) sur des substrats de GaSb, puis transférées pour dépôt et étude dans l'enceinte à ultravvide de dépôt métallique par l'intermédiaire d'un sas sous ultravide. Les mesures sont effectuées avant et après dépôts d'or (6 × 10^{13} 1,8 × 10^{16} atomes cm^{-2}) réalisés sur un substrat à la température ambiante ou refroidi à 220 K. Les échantillons sont ensuite étudiés pendant lerecuit jusqu'à 520 K. Les résultats obtenues montrent que l'or, dans un premier temps s'adsorbe sur la surface, puis, lorsque le dépôt augmente, diffuse dans le volume du matériau. cette diffusion, qui peut s'acompagner de la formation d'alliages, n'est cependant notable dans la gamme de température utilis

  10. Nonconsecutive Pars Interarticularis Defects.

    PubMed

    Elgafy, Hossein; Hart, Ryan C; Tanios, Mina

    2015-12-01

    Lumbar spondylolysis is a well-recognized condition occurring in adolescents because of repetitive overuse in sports. Nonconsecutive spondylolysis involving the lumbar spine is rare. In contrast to single-level pars defects that respond well to conservative treatment, there is no consensus about the management of multiple-level pars fractures; a few reports indicated that conservative management is successful, and the majority acknowledged that surgery is often required. The current study presents a rare case of pars fracture involving nonconsecutive segments and discusses the management options. In this case report, we review the patient's history, clinical examination, radiologic findings, and management, as well as the relevant literature. An 18-year-old man presented to the clinic with worsening lower back pain related to nonconsecutive pars fractures at L2 and L5. After 6 months of conservative management, diagnostic computed tomography-guided pars block was used to localize the symptomatic level at L2, which was treated surgically; the L5 asymptomatic pars fracture did not require surgery. At the last follow-up 2 years after surgery, the patient was playing baseball and basketball, and denied any back pain. This article reports a case of rare nonconsecutive pars fractures. Conservative management for at least 6 months is recommended. Successful management depends on the choice of appropriate treatment for each level. Single-photon emission computed tomography scan, and computed tomography-guided pars block are valuable preoperative tools to identify the symptomatic level in such a case. PMID:26665257

  11. Nonconsecutive Pars Interarticularis Defects.

    PubMed

    Elgafy, Hossein; Hart, Ryan C; Tanios, Mina

    2015-12-01

    Lumbar spondylolysis is a well-recognized condition occurring in adolescents because of repetitive overuse in sports. Nonconsecutive spondylolysis involving the lumbar spine is rare. In contrast to single-level pars defects that respond well to conservative treatment, there is no consensus about the management of multiple-level pars fractures; a few reports indicated that conservative management is successful, and the majority acknowledged that surgery is often required. The current study presents a rare case of pars fracture involving nonconsecutive segments and discusses the management options. In this case report, we review the patient's history, clinical examination, radiologic findings, and management, as well as the relevant literature. An 18-year-old man presented to the clinic with worsening lower back pain related to nonconsecutive pars fractures at L2 and L5. After 6 months of conservative management, diagnostic computed tomography-guided pars block was used to localize the symptomatic level at L2, which was treated surgically; the L5 asymptomatic pars fracture did not require surgery. At the last follow-up 2 years after surgery, the patient was playing baseball and basketball, and denied any back pain. This article reports a case of rare nonconsecutive pars fractures. Conservative management for at least 6 months is recommended. Successful management depends on the choice of appropriate treatment for each level. Single-photon emission computed tomography scan, and computed tomography-guided pars block are valuable preoperative tools to identify the symptomatic level in such a case.

  12. Par Pond water balance

    SciTech Connect

    Hiergesell, R.A.; Dixon, K.L.

    1996-06-01

    A water budget for the Par Pond hydrologic system was established in order to estimate the rate of groundwater influx to Par Pond. This estimate will be used in modeling exercises to predict Par Pond reservoir elevation and spillway discharge in the scenario where Savannah River water is no longer pumped and discharged into Par Pond. The principal of conservation of mass was used to develop the water budget, where water inflow was set equal to water outflow. Components of the water budget were identified, and the flux associated with each was determined. The water budget was considered balanced when inflow and outflow summed to zero. The results of this study suggest that Par Pond gains water from the groundwater system in the upper reaches of the reservoir, but looses water to the groundwater system near the dam. The rate of flux of groundwater from the water table aquifer into Par Pond was determined to be 13 cfs. The rate of flux from Par Pond to the water table aquifer near the dam was determined to be 7 cfs.

  13. THE MEASURES PAR PROJECT

    NASA Astrophysics Data System (ADS)

    Frouin, R. J.; Franz, B.

    2009-12-01

    The solar energy available for photosynthesis, known as PAR, controls the growth of phytoplankton and, therefore, regulates the composition and evolution of marine ecosystems. Knowing the spatial and temporal distribution of PAR over the oceans is critical to understanding biogeochemical cycles of carbon, nutrients, and oxygen, and to address important climate and global change issues such as the fate of anthropogenic atmospheric carbon dioxide. In view of this, a 12-year time series of PAR at the ocean surface, starting in September 1997, is being produced by the NASA Ocean Biology Processing Group from SeaWiFS, MODIS-Terra, and MODIS-Aqua data. The product covers the global oceans, with a spatial resolution of about 9.3x9.3 km (equal area grid) and a temporal resolution of one day. PAR is computed as the difference between the 400-700 nm solar flux incident on the top of the atmosphere (known) and reflected back to space by the atmosphere and surface (derived from satellite radiance), taking into account atmospheric absorption (modeled). Knowledge of pixel composition is not required, eliminating the need for cloud screening and arbitrary assumptions about sub-pixel cloudiness. Combining data from satellite sensors with different equatorial crossing times accounts for the diurnal variability of clouds and, therefore, increases accuracy on a daily time scale. The processing system, including routine check of accuracy and control of quality, is designed to operate during the entire lifetime of SeaWiFS and MODIS, and to accommodate future sensors with ocean-color capabilities. Maps of daily, weekly, and monthly PAR obtained from individual sensors are presented, as well as merged products. Accuracy is quantified in comparisons with other satellite estimates, the National Centers for Environmental Prediction reanalysis product, and in-situ measurements from fixed buoys and platforms. The good statistical performance makes the satellite PAR product suitable for large

  14. La pelade par plaques

    PubMed Central

    Spano, Frank; Donovan, Jeff C.

    2015-01-01

    Résumé Objectif Présenter aux médecins de famille des renseignements de base pour faire comprendre l’épidémiologie, la pathogenèse, l’histologie et l’approche clinique au diagnostic de la pelade par plaques. Sources des données Une recension a été effectuée dans PubMed pour trouver des articles pertinents concernant la pathogenèse, le diagnostic et le pronostic de la pelade par plaques. Message principal La pelade par plaques est une forme de perte pileuse auto-immune dont la prévalence durant une vie est d’environ 2 %. Des antécédents personnels ou familiaux de troubles auto-immuns concomitants, comme le vitiligo ou une maladie de la thyroïde, peuvent être observés dans un petit sous-groupe de patients. Le diagnostic peut souvent être posé de manière clinique en se fondant sur la perte de cheveux non cicatricielle et circulaire caractéristique, accompagnée de cheveux en « point d’exclamation » en périphérie chez ceux dont le problème en est aux premiers stades. Le diagnostic des cas plus complexes ou des présentations inhabituelles peut être facilité par une biopsie et un examen histologique. Le pronostic varie largement et de mauvais résultats sont associés à une apparition à un âge précoce, une perte importante, la variante ophiasis, des changements aux ongles, des antécédents familiaux ou des troubles auto-immuns concomitants. Conclusion La pelade par plaques est une forme auto-immune de perte de cheveux périodiquement observée en soins primaires. Les médecins de famille sont bien placés pour identifier la pelade par plaques, déterminer la gravité de la maladie et poser le diagnostic différentiel approprié. De plus, ils sont en mesure de renseigner leurs patients à propos de l’évolution clinique de la maladie ainsi que du pronostic général selon le sous-type de patients.

  15. La pelade par plaques

    PubMed Central

    Spano, Frank; Donovan, Jeff C.

    2015-01-01

    Résumé Objectif Présenter aux médecins de famille des renseignements de base pour faire comprendre les schémas thérapeutiques et les résultats des traitements pour la pelade par plaques, de même que les aider à identifier les patients pour qui une demande de consultation en dermatologie pourrait s’imposer. Sources des données Une recension a été effectuée dans PubMed pour trouver des articles pertinents concernant le traitement de la pelade par plaques. Message principal La pelade par plaques est une forme auto-immune de perte pileuse qui touche à la fois les enfants et les adultes. Même s’il n’y a pas de mortalité associée à la maladie, la morbidité découlant des effets psychologiques de la perte des cheveux peut être dévastatrice. Lorsque la pelade par plaques et le sous-type de la maladie sont identifiés, un schéma thérapeutique approprié peut être amorcé pour aider à arrêter la chute des cheveux et possiblement faire commencer la repousse. Les traitements de première intention sont la triamcinolone intralésionnelle avec des corticostéroïdes topiques ou du minoxidil ou les 2. Les médecins de famille peuvent prescrire ces traitements en toute sécurité et amorcer ces thérapies. Les cas plus avancés ou réfractaires pourraient avoir besoin de diphénylcyclopropénone topique ou d’anthraline topique. On peut traiter la perte de cils avec des analogues de la prostaglandine. Les personnes ayant subi une perte de cheveux abondante peuvent recourir à des options de camouflage ou à des prothèses capillaires. Il est important de surveiller les troubles psychiatriques en raison des effets psychologiques profonds de la perte de cheveux. Conclusion Les médecins de famille verront de nombreux patients qui perdent leurs cheveux. La reconnaissance de la pelade par plaques et la compréhension du processus pathologique sous-jacent permettent d’amorcer un schéma thérapeutique approprié. Les cas plus graves ou r

  16. X-Ray Diffraction.

    ERIC Educational Resources Information Center

    Smith, D. K.; Smith, K. L.

    1980-01-01

    Reviews applications in research and analytical characterization of compounds and materials in the field of X-ray diffraction, emphasizing new developments in applications and instrumentation in both single crystal and powder diffraction. Cites 414 references. (CS)

  17. Electromagnetic diffraction by plane reflection diffraction gratings

    NASA Technical Reports Server (NTRS)

    Bocker, R. P.; Marathay, A. S.

    1972-01-01

    A plane wave theory was developed to study electromagnetic diffraction by plane reflection diffraction gratings of infinite extent. A computer program was written to calculate the energy distribution in the various orders of diffraction for the cases when the electric or magnetic field vectors are parallel to the grating grooves. Within the region of validity of this theory, results were in excellent agreement with those in the literature. Energy conservation checks were also made to determine the region of validity of the plane wave theory. The computer program was flexible enough to analyze any grating profile that could be described by a single value function f(x). Within the region of validity the program could be used with confidence. The computer program was used to investigate the polarization and blaze properties of the diffraction grating.

  18. Par Pond vegetation status 1996

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1996-12-01

    The water level of Par Pond was lowered approximately 20 feet in mid-1991 in order to protect downstream residents from possible dam failure suggested by subsidence on the downstream slope of the dam and to repair the dam. This lowering exposed both emergent and nonemergent macrophyte beds to drying conditions resulting in extensive losses. A survey of the newly emergent, shoreline aquatic plant communities of Par Pond began in June 1995, three months after the refilling of Par Pond to approximately 200 feet above mean sea level. These surveys continued in July, September, and late October, 1995, and into the early spring and late summer of 1996. Communities similar to the pre-drawdown, Par Pond aquatic plant communities continue to become re-established. Emergent beds of maidencane, lotus, waterlily, watershield, and Pontederia are extensive and well developed. Measures of percent cover, width of beds, and estimates of area of coverage with satellite data indicate regrowth within two years of from 40 to 60% of levels prior to the draw down. Cattail occurrence continued to increase during the summer of 1996, especially in the former warm arm of Par Pond, but large beds common to Par Pond prior to the draw down still have not formed. Lotus has invaded and occupies many of the areas formerly dominated by cattail beds. To track the continued development of macrophytes in Par Pond, future surveys through the summer and early fall of 1997, along with the evaluation of satellite data to map the extent of the macrophyte beds of Par Pond, are planned.

  19. Hard Diffraction at CDF

    SciTech Connect

    Melese, P.; CDF Collaboration

    1997-06-01

    We present results on diffractive production of hard processes in {anti p}p collisions at {radical}s = 1.8 TeV at the Tevatron using the CDF detector. The signatures used to identify diffractive events are the forward rapidity gap and/or the detection of a recoil antiproton with high forward momentum. We have observed diffractive W- boson, dijet, and heavy quark production. We also present results on double-pomeron production of dijets.

  20. Operational Principles for the Dynamics of the In Vitro ParA-ParB System

    PubMed Central

    Jindal, Lavisha; Emberly, Eldon

    2015-01-01

    In many bacteria the ParA-ParB protein system is responsible for actively segregating DNA during replication. ParB proteins move by interacting with DNA bound ParA-ATP, stimulating their unbinding by catalyzing hydrolysis, that leads to rectified motion due to the creation of a wake of depleted ParA. Recent in vitro experiments have shown that a ParB covered magnetic bead can move with constant speed over a DNA covered substrate that is bound by ParA. It has been suggested that the formation of a gradient in ParA leads to diffusion-ratchet like motion of the ParB bead but how it forms and generates a force is still a matter of exploration. Here we develop a deterministic model for the in vitro ParA-ParB system and show that a ParA gradient can spontaneously form due to any amount of initial spatial noise in bound ParA. The speed of the bead is independent of this noise but depends on the ratio of the range of ParA-ParB force on the bead to that of removal of surface bound ParA by ParB. We find that at a particular ratio the speed attains a maximal value. We also consider ParA rebinding (including cooperativity) and ParA surface diffusion independently as mechanisms for ParA recovery on the surface. Depending on whether the DNA covered surface is undersaturated or saturated with ParA, we find that the bead can accelerate persistently or potentially stall. Our model highlights key requirements of the ParA-ParB driving force that are necessary for directed motion in the in vitro system that may provide insight into the in vivo dynamics of the ParA-ParB system. PMID:26670738

  1. Phononic crystal diffraction gratings

    NASA Astrophysics Data System (ADS)

    Moiseyenko, Rayisa P.; Herbison, Sarah; Declercq, Nico F.; Laude, Vincent

    2012-02-01

    When a phononic crystal is interrogated by an external source of acoustic waves, there is necessarily a phenomenon of diffraction occurring on the external enclosing surfaces. Indeed, these external surfaces are periodic and the resulting acoustic diffraction grating has a periodicity that depends on the orientation of the phononic crystal. This work presents a combined experimental and theoretical study on the diffraction of bulk ultrasonic waves on the external surfaces of a 2D phononic crystal that consists of a triangular lattice of steel rods in a water matrix. The results of transmission experiments are compared with theoretical band structures obtained with the finite-element method. Angular spectrograms (showing frequency as a function of angle) determined from diffraction experiments are then compared with finite-element simulations of diffraction occurring on the surfaces of the crystal. The experimental results show that the diffraction that occurs on its external surfaces is highly frequency-dependent and has a definite relation with the Bloch modes of the phononic crystal. In particular, a strong influence of the presence of bandgaps and deaf bands on the diffraction efficiency is found. This observation opens perspectives for the design of efficient phononic crystal diffraction gratings.

  2. Parametric Powder Diffraction

    NASA Astrophysics Data System (ADS)

    David, William I. F.; Evans, John S. O.

    The rapidity with which powder diffraction data may be collected, not only at neutron and X-ray synchrotron facilities but also in the laboratory, means that the collection of a single diffraction pattern is now the exception rather than the rule. Many experiments involve the collection of hundreds and perhaps many thousands of datasets where a parameter such as temperature or pressure is varied or where time is the variable and life-cycle, synthesis or decomposition processes are monitored or three-dimensional space is scanned and the three-dimensional internal structure of an object is elucidated. In this paper, the origins of parametric diffraction are discussed and the techniques and challenges of parametric powder diffraction analysis are presented. The first parametric measurements were performed around 50 years ago with the development of a modified Guinier camera but it was the automation afforded by neutron diffraction combined with increases in computer speed and memory that established parametric diffraction on a strong footing initially at the ILL, Grenoble in France. The theoretical parameterisation of quantities such as lattice constants and atomic displacement parameters will be discussed and selected examples of parametric diffraction over the past 20 years will be reviewed that highlight the power of the technique.

  3. Multilayer dielectric diffraction gratings

    DOEpatents

    Perry, Michael D.; Britten, Jerald A.; Nguyen, Hoang T.; Boyd, Robert; Shore, Bruce W.

    1999-01-01

    The design and fabrication of dielectric grating structures with high diffraction efficiency used in reflection or transmission is described. By forming a multilayer structure of alternating index dielectric materials and placing a grating structure on top of the multilayer, a diffraction grating of adjustable efficiency, and variable optical bandwidth can be obtained. Diffraction efficiency into the first order in reflection varying between 1 and 98 percent has been achieved by controlling the design of the multilayer and the depth, shape, and material comprising the grooves of the grating structure. Methods for fabricating these gratings without the use of ion etching techniques are described.

  4. Multilayer dielectric diffraction gratings

    DOEpatents

    Perry, M.D.; Britten, J.A.; Nguyen, H.T.; Boyd, R.; Shore, B.W.

    1999-05-25

    The design and fabrication of dielectric grating structures with high diffraction efficiency used in reflection or transmission is described. By forming a multilayer structure of alternating index dielectric materials and placing a grating structure on top of the multilayer, a diffraction grating of adjustable efficiency, and variable optical bandwidth can be obtained. Diffraction efficiency into the first order in reflection varying between 1 and 98 percent has been achieved by controlling the design of the multilayer and the depth, shape, and material comprising the grooves of the grating structure. Methods for fabricating these gratings without the use of ion etching techniques are described. 7 figs.

  5. Fraunhofer Diffraction and Polarization.

    ERIC Educational Resources Information Center

    Fortin, E.

    1979-01-01

    Describes an experiment for the intermediate undergraduate optics laboratory designed to illustrate simultaneously some aspects of the phenomena of diffraction; interference, coherence, apodization, the Fresnel-Arago law; as well as of the interrelations between these concepts. (HM)

  6. Fresnel Coherent Diffractive Imaging

    NASA Astrophysics Data System (ADS)

    Williams, G. J.; Quiney, H. M.; Dhal, B. B.; Tran, C. Q.; Nugent, K. A.; Peele, A. G.; Paterson, D.; de Jonge, M. D.

    2006-07-01

    We present an x-ray coherent diffractive imaging experiment utilizing a nonplanar incident wave and demonstrate success by reconstructing a nonperiodic gold sample at 24 nm resolution. Favorable effects of the curved beam illumination are identified.

  7. Multigap Diffraction at LHC

    SciTech Connect

    Goulianos, Konstantin

    2005-10-06

    The large rapidity interval available at the Large Hadron Collider (LHC) offers an arena in which the QCD aspects of diffraction may be explored in an environment free of gap survival complications using events with multiple rapidity gaps.

  8. Par Pond Fish, Water, and Sediment Chemistry

    SciTech Connect

    Paller, M.H.; Wike, L.D.

    1996-06-01

    The objectives of this report are to describe the Par Pond fish community and the impact of the drawdown and refill on the community, describe contaminant levels in Par Pond fish, sediments, and water and indicate how contaminant concentrations and distributions were affected by the drawdown and refill, and predict possible effects of future water level fluctuations in Par Pond.

  9. Reflective diffraction grating

    DOEpatents

    Lamartine, Bruce C.

    2003-06-24

    Reflective diffraction grating. A focused ion beam (FIB) micromilling apparatus is used to store color images in a durable medium by milling away portions of the surface of the medium to produce a reflective diffraction grating with blazed pits. The images are retrieved by exposing the surface of the grating to polychromatic light from a particular incident bearing and observing the light reflected by the surface from specified reception bearing.

  10. Directed and persistent movement arises from mechanochemistry of the ParA/ParB system

    NASA Astrophysics Data System (ADS)

    Hu, Longhua; Vecchiarelli, Anthony G.; Mizuuchi, Kiyoshi; Neuman, Keir C.; Liu, Jian

    The segregation of DNA prior to cell division is essential for faithful genetic inheritance. In many bacteria, segregation of the low-copy-number plasmids involves an active partition system composed of ParA ATPase and its stimulator protein ParB. Recent experiments suggest that ParA/ParB system motility is driven by a diffusion-ratchet mechanism in which ParB-coated plasmid both creates and follows a ParA gradient on the nucleoid surface. However, the detailed mechanism of ParA/ParB-mediated directed and persistent movement remains unknown. We develop a theoretical model describing ParA/ParB-mediated motility. We show that the ParA/ParB system can work as a Brownian ratchet, which effectively couples the ATPase-dependent cycling of ParA-nucleoid affinity to the motion of the ParB bound cargo. Paradoxically, the resulting processive motion relies on quenching diffusive plasmid motion through a large number of transient ParA/ParB-mediated tethers to the nucleoid surface. Our work sheds light on a new emergent phenomenon in which non-motor proteins work collectively via mechanochemical coupling to propel cargos -- an ingenious solution shaped by evolution to cope with the lack of processive motor proteins in bacteria.

  11. Parallel Climate Analysis Toolkit (ParCAT)

    SciTech Connect

    Smith, Brian Edward

    2013-06-30

    The parallel analysis toolkit (ParCAT) provides parallel statistical processing of large climate model simulation datasets. ParCAT provides parallel point-wise average calculations, frequency distributions, sum/differences of two datasets, and difference-of-average and average-of-difference for two datasets for arbitrary subsets of simulation time. ParCAT is a command-line utility that can be easily integrated in scripts or embedded in other application. ParCAT supports CMIP5 post-processed datasets as well as non-CMIP5 post-processed datasets. ParCAT reads and writes standard netCDF files.

  12. suPAR: The Molecular Crystal Ball

    PubMed Central

    Thunø, Maria; Macho, Betina; Eugen-Olsen, Jesper

    2009-01-01

    soluble urokinase Plasminogen Activator Receptor (suPAR) levels reflect inflammation and elevated suPAR levels are found in several infectious diseases and cancer. suPAR exists in three forms; suPARI-III, suPARII-III and suPARI which show different properties due to structural differences. Studies suggest that full-length suPAR is a regulator of uPAR/uPA by acting as uPA-scavenger, whereas the cleaved suPARII-III act as a chemotactic agent promoting the immune response via the SRSRY sequence in the linker-region. This review focus on the various suPAR fragments and their involvement in inflammation and pathogenic processes. We focus on the molecular mechanisms of the suPAR fragments and the link to the inflammatory process, as this could lead to medical applications in infectious and pathological conditions. PMID:19893210

  13. Multipath analysis diffraction calculations

    NASA Technical Reports Server (NTRS)

    Statham, Richard B.

    1996-01-01

    This report describes extensions of the Kirchhoff diffraction equation to higher edge terms and discusses their suitability to model diffraction multipath effects of a small satellite structure. When receiving signals, at a satellite, from the Global Positioning System (GPS), reflected signals from the satellite structure result in multipath errors in the determination of the satellite position. Multipath error can be caused by diffraction of the reflected signals and a method of calculating this diffraction is required when using a facet model of the satellite. Several aspects of the Kirchhoff equation are discussed and numerical examples, in the near and far fields, are shown. The vector form of the extended Kirchhoff equation, by adding the Larmor-Tedone and Kottler edge terms, is given as a mathematical model in an appendix. The Kirchhoff equation was investigated as being easily implemented and of good accuracy in the basic form, especially in phase determination. The basic Kirchhoff can be extended for higher accuracy if desired. A brief discussion of the method of moments and the geometric theory of diffraction is included, but seems to offer no clear advantage in implementation over the Kirchhoff for facet models.

  14. Directed and persistent movement arises from mechanochemistry of the ParA/ParB system.

    PubMed

    Hu, Longhua; Vecchiarelli, Anthony G; Mizuuchi, Kiyoshi; Neuman, Keir C; Liu, Jian

    2015-12-22

    The segregation of DNA before cell division is essential for faithful genetic inheritance. In many bacteria, segregation of low-copy number plasmids involves an active partition system composed of a nonspecific DNA-binding ATPase, ParA, and its stimulator protein ParB. The ParA/ParB system drives directed and persistent movement of DNA cargo both in vivo and in vitro. Filament-based models akin to actin/microtubule-driven motility were proposed for plasmid segregation mediated by ParA. Recent experiments challenge this view and suggest that ParA/ParB system motility is driven by a diffusion ratchet mechanism in which ParB-coated plasmid both creates and follows a ParA gradient on the nucleoid surface. However, the detailed mechanism of ParA/ParB-mediated directed and persistent movement remains unknown. Here, we develop a theoretical model describing ParA/ParB-mediated motility. We show that the ParA/ParB system can work as a Brownian ratchet, which effectively couples the ATPase-dependent cycling of ParA-nucleoid affinity to the motion of the ParB-bound cargo. Paradoxically, this resulting processive motion relies on quenching diffusive plasmid motion through a large number of transient ParA/ParB-mediated tethers to the nucleoid surface. Our work thus sheds light on an emergent phenomenon in which nonmotor proteins work collectively via mechanochemical coupling to propel cargos-an ingenious solution shaped by evolution to cope with the lack of processive motor proteins in bacteria.

  15. Directed and persistent movement arises from mechanochemistry of the ParA/ParB system

    PubMed Central

    Hu, Longhua; Vecchiarelli, Anthony G.; Mizuuchi, Kiyoshi; Neuman, Keir C.; Liu, Jian

    2015-01-01

    The segregation of DNA before cell division is essential for faithful genetic inheritance. In many bacteria, segregation of low-copy number plasmids involves an active partition system composed of a nonspecific DNA-binding ATPase, ParA, and its stimulator protein ParB. The ParA/ParB system drives directed and persistent movement of DNA cargo both in vivo and in vitro. Filament-based models akin to actin/microtubule-driven motility were proposed for plasmid segregation mediated by ParA. Recent experiments challenge this view and suggest that ParA/ParB system motility is driven by a diffusion ratchet mechanism in which ParB-coated plasmid both creates and follows a ParA gradient on the nucleoid surface. However, the detailed mechanism of ParA/ParB-mediated directed and persistent movement remains unknown. Here, we develop a theoretical model describing ParA/ParB-mediated motility. We show that the ParA/ParB system can work as a Brownian ratchet, which effectively couples the ATPase-dependent cycling of ParA–nucleoid affinity to the motion of the ParB-bound cargo. Paradoxically, this resulting processive motion relies on quenching diffusive plasmid motion through a large number of transient ParA/ParB-mediated tethers to the nucleoid surface. Our work thus sheds light on an emergent phenomenon in which nonmotor proteins work collectively via mechanochemical coupling to propel cargos—an ingenious solution shaped by evolution to cope with the lack of processive motor proteins in bacteria. PMID:26647183

  16. Diffraction by nanocrystals II.

    PubMed

    Chen, Joe P J; Millane, Rick P

    2014-08-01

    Nanocrystals with more than one molecule in the unit cell will generally crystallize with incomplete unit cells on the crystal surface. Previous results show that the ensemble-averaged diffraction by such crystals consists of a usual Bragg component and two other Bragg-like components due to the incomplete unit cells. Using an intrinsic flexibility in the definition of the incomplete-unit-cell part of a crystal, the problem is formulated such that the magnitude of the Bragg-like components is minimized, which leads to a simpler and more useful interpretation of the diffraction. Simulations show the nature of the relative magnitudes of the diffraction components in different regions of reciprocal space and the effect of crystal faceting. PMID:25121528

  17. Calculating cellulose diffraction patterns

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Although powder diffraction of cellulose is a common experiment, the patterns are not widely understood. The theory is mathematical, there are numerous different crystal forms, and the conventions are not standardized. Experience with IR spectroscopy is not directly transferable. An awful error, tha...

  18. Diffraction with wavefront curvature

    NASA Astrophysics Data System (ADS)

    Nugent, K. A.; Peele, A. G.; Quiney, H. M.; Chapman, H. N.

    2005-05-01

    Modern X-ray optics can produce a focused synchrotron beam with curvature on a scale comparable to that of an isolated biomolecule or to the lattice spacing of a biomolecular crystal. It is demonstrated that diffraction of phase-curved beams from such systems allows unique and robust phase recovery.

  19. DIFFRACTION FROM MODEL CRYSTALS

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Although calculating X-ray diffraction patterns from atomic coordinates of a crystal structure is a widely available capability, calculation from non-periodic arrays of atoms has not been widely applied to cellulose. Non-periodic arrays result from modeling studies that, even though started with at...

  20. Diffract, then destroy

    NASA Astrophysics Data System (ADS)

    Ball, Philip

    2016-09-01

    A new implementation of X-ray diffraction using free-electron lasers can take snapshots of biological molecules that are inaccessible via X-ray crystallography. As Philip Ball reports, the technique can even be used to create stop-motion films of dynamic molecular processes

  1. Croissance epitaxiale de GaAs sur substrats de Ge par epitaxie par faisceaux chimiques

    NASA Astrophysics Data System (ADS)

    Belanger, Simon

    La situation energetique et les enjeux environnementaux auxquels la societe est confrontee entrainent un interet grandissant pour la production d'electricite a partir de l'energie solaire. Parmi les technologies actuellement disponibles, la filiere du photovoltaique a concentrateur solaire (CPV pour concentrator photovoltaics) possede un rendement superieur et mi potentiel interessant a condition que ses couts de production soient competitifs. La methode d'epitaxie par faisceaux chimiques (CBE pour chemical beam epitaxy) possede plusieurs caracteristiques qui la rendent interessante pour la production a grande echelle de cellules photovoltaiques a jonctions multiples a base de semi-conducteurs III-V. Ce type de cellule possede la meilleure efficacite atteinte a ce jour et est utilise sur les satellites et les systemes photovoltaiques a concentrateur solaire (CPV) les plus efficaces. Une des principales forces de la technique CBE se trouve dans son potentiel d'efficacite d'utilisation des materiaux source qui est superieur a celui de la technique d'epitaxie qui est couramment utilisee pour la production a grande echelle de ces cellules. Ce memoire de maitrise presente les travaux effectues dans le but d'evaluer le potentiel de la technique CBE pour realiser la croissance de couches de GaAs sur des substrats de Ge. Cette croissance constitue la premiere etape de fabrication de nombreux modeles de cellules solaires a haute performance decrites plus haut. La realisation de ce projet a necessite le developpement d'un procede de preparation de surface pour les substrats de germanium, la realisation de nombreuses sceances de croissance epitaxiale et la caracterisation des materiaux obtenus par microscopie optique, microscopie a force atomique (AFM), diffraction des rayons-X a haute resolution (HRXRD), microscopie electronique a transmission (TEM), photoluminescence a basse temperature (LTPL) et spectrometrie de masse des ions secondaires (SIMS). Les experiences ont permis

  2. Protease-activated receptor-1 (PAR1) and PAR2 but not PAR4 mediate relaxations in lower esophageal sphincter.

    PubMed

    Huang, Shih-Che

    2007-07-01

    Protease-activated receptor-1 (PAR1), PAR2 and PAR4 activation can alter the gastrointestinal motility. To investigate effects mediated by PARs in the lower esophageal sphincter, we measured contraction or relaxation of transverse strips from the guinea-pig lower esophageal sphincter caused by PAR1 (TFLLR-NH2 and SFLLRN-NH2), PAR2 (SLIGKV-NH2 and SLIGRL-NH2) and PAR4 peptide agonists (GYPGKF-NH2, GYPGQV-NH2 and AYPGKF-NH2) as well as PAR protease activators (thrombin and trypsin). In resting lower esophageal sphincter strips, TFLLR-NH2 and SFLLRN-NH2 caused moderate concentration-dependent relaxation whereas thrombin did not cause any relaxation or contraction. Furthermore, in carbachol-contracted strips, TFLLR-NH2 and SFLLRN-NH2 caused marked whereas thrombin caused mild concentration-dependent relaxation. These indicate the existence of PAR1 mediating relaxation. Similarly, in resting lower esophageal sphincter strips, trypsin caused moderate concentration-dependent relaxation whereas SLIGRL-NH2 and SLIGKV-NH2 did not cause any relaxation or contraction. In addition, in carbachol-contracted strips, trypsin caused marked whereas SLIGRL-NH2 and SLIGKV-NH2 caused mild concentration-dependent relaxation. These indicate the existence of PAR2 mediating relaxation. The relaxant response of thrombin, TFLLR-NH2, trypsin and SLIGKV-NH2 was insensitive to atropine or tetrodotoxin, suggesting a direct effect. The relaxant response of trypsin was not affected by apamin, charybdotoxin, indomethacin and capsaicin but was attenuated by NG-nitro-L-arginine methyl ester, indicating involvement of NO. FSLLR-NH2, a PAR1 control peptide, and VKGILS-NH2, a PAR2 control peptide, as well as all three PAR4 peptide agonists, GYPGKF-NH2, GYPGQV-NH2 and AYPGKF-NH2, did not cause any relaxation or contraction. Taken together, these results demonstrate that PAR1 and PAR2 but not PAR4 mediate relaxations in the guinea-pig lower esophageal sphincter. PMID:17335921

  3. Radiometric analysis of diffraction

    NASA Astrophysics Data System (ADS)

    Castañeda, R.; Betancur, R.; Herrera, J.; Carrasquilla, J.

    2008-04-01

    A description of Fresnel and Fraunhofer diffraction of quasi-homogenous optical fields in any state of spatial coherence is presented, which clearly differs from the classical formalism. Instead of the propagation of the cross-spectral density from the diffracting aperture to the observation plane, the diffracting aperture is regarded as a planar quasi-homogeneous source, whose generalised radiance is carried by the spatial coherence wavelets, and the power distribution at the observation plane is expressed in terms of the generalised radiant intensity. It allows interpreting the negative values of the generalised radiance as "negative energies" emitted along specific directions and subjected to the achievement of the conservation law of energy. This interpretation is not evident in the classical formalism. Consequently, interference can be thought as resulting of energy transfer over a given wavefront, due to the addition of equal amounts of "positive" and "negative" energies, along specific directions, to the contributions provided by the individual radiators of the radiant source. In this sense, the radiant flux from the source, which is provided only by the individual contributions, is redistributed depending on the spatial coherence properties of the field. This redistribution characterises the diffraction phenomenon. It is also shown that the supports of the complex degree of spatial coherence near the aperture edge are vignetted by the edge. This feature is a cause for the generalised radiance providing "negative energies", and constitutes the actual effect of the edge on diffraction. The approach is validated by the close concordance between the numerical and the experimental results, which should be regarded as a proof of the physical existence of the spatial coherence wavelets.

  4. Colored Diffraction Catastrophes

    NASA Astrophysics Data System (ADS)

    Berry, M. V.; Klein, S.

    1996-03-01

    On fine scales, caustics produced with white light show vividly colored diffraction fringes. For caustics described by the elementary catastrophes of singularity theory, the colors are characteristic of the type of singularity. We study the diffraction colors of the fold and cusp catastrophes. The colors can be simulated computationally as the superposition of monochromatic patterns for different wavelengths. Far from the caustic, where the luminosity contrast is negligible, the fringe colors persist; an asymptotic theory explains why. Experiments with caustics produced by refraction through irregular bathroom-window glass show good agreement with theory. Colored fringes near the cusp reveal fine lines that are not present in any of the monochromatic components; these lines are explained in terms of partial decoherence between rays with widely differing path differences.

  5. Colored diffraction catastrophes.

    PubMed Central

    Berry, M V; Klein, S

    1996-01-01

    On fine scales, caustics produced with white light show vividly colored diffraction fringes. For caustics described by the elementary catastrophes of singularity theory, the colors are characteristic of the type of singularity. We study the diffraction colors of the fold and cusp catastrophes. The colors can be simulated computationally as the superposition of monochromatic patterns for different wavelengths. Far from the caustic, where the luminosity contrast is negligible, the fringe colors persist; an asymptotic theory explains why. Experiments with caustics produced by refraction through irregular bathroom-window glass show good agreement with theory. Colored fringes near the cusp reveal fine lines that are not present in any of the monochromatic components; these lines are explained in terms of partial decoherence between rays with widely differing path differences. Images Fig. 1 Fig. 2 Fig. 3 Fig. 6 Fig. 8 Fig. 9 Fig. 10 PMID:11607642

  6. Multiple wavelength diffractive imaging

    NASA Astrophysics Data System (ADS)

    Chen, Bo; Dilanian, Ruben A.; Teichmann, Sven; Abbey, Brian; Peele, Andrew G.; Williams, Garth J.; Hannaford, Peter; van Dao, Lap; Quiney, Harry M.; Nugent, Keith A.

    2009-02-01

    We demonstrate coherent diffraction imaging using multiple harmonics from a high-harmonic generation source. An algorithm is presented that builds the known incident spectrum into the reconstruction procedure with the result that the useable flux is increased by more than an order of magnitude. Excellent images are obtained with a resolution of (165±5)nm and compare very well with images from a scanning electron microscope.

  7. SINGLE CRYSTAL NEUTRON DIFFRACTION.

    SciTech Connect

    KOETZLE,T.F.

    2001-03-13

    Single-crystal neutron diffraction measures the elastic Bragg reflection intensities from crystals of a material, the structure of which is the subject of investigation. A single crystal is placed in a beam of neutrons produced at a nuclear reactor or at a proton accelerator-based spallation source. Single-crystal diffraction measurements are commonly made at thermal neutron beam energies, which correspond to neutron wavelengths in the neighborhood of 1 Angstrom. For high-resolution studies requiring shorter wavelengths (ca. 0.3-0.8 Angstroms), a pulsed spallation source or a high-temperature moderator (a ''hot source'') at a reactor may be used. When complex structures with large unit-cell repeats are under investigation, as is the case in structural biology, a cryogenic-temperature moderator (a ''cold source'') may be employed to obtain longer neutron wavelengths (ca. 4-10 Angstroms). A single-crystal neutron diffraction analysis will determine the crystal structure of the material, typically including its unit cell and space group, the positions of the atomic nuclei and their mean-square displacements, and relevant site occupancies. Because the neutron possesses a magnetic moment, the magnetic structure of the material can be determined as well, from the magnetic contribution to the Bragg intensities. This latter aspect falls beyond the scope of the present unit; for information on magnetic scattering of neutrons see Unit 14.3. Instruments for single-crystal diffraction (single-crystal diffractometers or SCDs) are generally available at the major neutron scattering center facilities. Beam time on many of these instruments is available through a proposal mechanism. A listing of neutron SCD instruments and their corresponding facility contacts is included in an appendix accompanying this unit.

  8. Polychromatic diffraction contrast tomography

    SciTech Connect

    King, A.; Reischig, P.; Adrien, J.; Peetermans, S.; Ludwig, W.

    2014-11-15

    This tutorial review introduces the use of polychromatic radiation for 3D grain mapping using X-ray diffraction contrast tomography. The objective is to produce a 3D map of the grain shapes and orientations within a bulk, millimeter-sized polycrystalline sample. The use of polychromatic radiation enables the standard synchrotron X-ray technique to be applied in a wider range of contexts: 1) Using laboratory X-ray sources allows a much wider application of the diffraction contrast tomography technique. 2) Neutron sources allow large samples, or samples containing high Z elements to be studied. 3) Applied to synchrotron sources, smaller samples may be treated, or faster measurements may be possible. Challenges and particularities in the data acquisition and processing, and the limitations of the different variants, are discussed. - Highlights: • We present a tutorial review of polychromatic diffraction contrast tomography techniques. • The use of polychromatic radiation allows the standard synchrotron DCT technique to be extended to a range of other sources. • The characteristics and limitations of all variants of the techniques are derived, discussed and compared. • Examples using laboratory X-ray and cold neutron radiation are presented. • Suggestions for the future development of these techniques are presented.

  9. PAR for the Course: A Congruent Pedagogical Approach for a PAR Methods Class

    ERIC Educational Resources Information Center

    Hammond, Joyce D.; Hicks, Maria; Kalman, Rowenn; Miller, Jason

    2005-01-01

    In the past two years, three graduate students and a senior faculty member have co-taught a participatory action research (PAR) course to undergraduate and graduate students. In this article the co-teachers advocate a set of pedagogical principles and practices in a PAR-oriented classroom that establishes congruency with community PAR projects in…

  10. Par Pond vegetation status Summer 1995 -- Summary

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1996-01-01

    The water level of Par Pond was lowered approximately 20 feet in mid-1991 in order to protect downstream residents from possible dam failure suggested by subsidence on the downstream slope of the dam and to repair the dam. This lowering exposed both emergent and nonemergent macrophyte beds to drying conditions resulting in extensive losses. A survey of the newly emergent, shoreline aquatic plant communities of Par Pond began in June 1995, three months after the refilling of Par Pond to approximately 200 feet above mean sea level. These surveys continued in July, September, and late October, 1995. Communities similar to the pre-drawdown, Par Pond aquatic plant communities are becoming re-established. Emergent beds of maidencane, lotus, waterlily, and watershield are extensive and well developed. Cattail occurrence continued to increase during the summer, but large beds common to Par Pond prior to the drawdown have not formed. Estimates from SPOT HRV, remote sensing satellite data indicated that as much as 120 hectares of emergent wetlands vegetation may have been present along the Par Pond shoreline by early October, 1995. To track the continued development of macrophytes in Par Pond, future surveys throughout 1996 and 1997, along with the continued evaluation of satellite data to map the areal extent of the macrophyte beds of Par Pond, are planned.

  11. Diffraction of a Laser Beam.

    ERIC Educational Resources Information Center

    Jodoin, Ronald E.

    1979-01-01

    Investigates the effect of the nonuniform irradiance across a laser beam on diffraction of the beam, specifically the Fraunhofer diffraction of a laser beam with a Gaussian irradiance profile as it passes through a circular aperture. (GA)

  12. Aberrations of diffracted wave fields. II. Diffraction gratings.

    PubMed

    Mahajan, V N

    2000-12-01

    The Rayleigh-Sommerfeld theory is applied to diffraction of a spherical wave by a grating. The grating equation is obtained from the aberration-free diffraction pattern, and its aberrations are shown to be the same as the conventional aberrations obtained by using Fermat's principle. These aberrations are shown to be not associated with the diffraction process. Moreover, it is shown that the irradiance distribution of a certain diffraction order is the Fraunhofer diffraction pattern of the grating aperture as a whole aberrated by the aberration of that order. PMID:11140481

  13. Recent diffractive results from HERA

    NASA Astrophysics Data System (ADS)

    Valkárová, Alice

    2016-07-01

    The diffractive dijet cross sections for photoproduction and deep inelastic scattering were studied and compared with theoretical NLO QCD predictions. The results of exclusive dijet production were compared to predictions from models which are based on different assumptions about the nature of diffractive exchange. Isolated prompt photons in diffractive photoproduction produced inclusively or together with a jet were studied for the first time.

  14. ParAB Partition Dynamics in Firmicutes: Nucleoid Bound ParA Captures and Tethers ParB-Plasmid Complexes

    PubMed Central

    Lioy, Virginia S.; Volante, Andrea; Soberón, Nora E.; Lurz, Rudi; Ayora, Silvia; Alonso, Juan C.

    2015-01-01

    In Firmicutes, small homodimeric ParA-like (δ2) and ParB-like (ω2) proteins, in concert with cis-acting plasmid-borne parS and the host chromosome, secure stable plasmid inheritance in a growing bacterial population. This study shows that (ω:YFP)2 binding to parS facilitates plasmid clustering in the cytosol. (δ:GFP)2 requires ATP binding but not hydrolysis to localize onto the cell’s nucleoid as a fluorescent cloud. The interaction of (δ:CFP)2 or δ2 bound to the nucleoid with (ω:YFP)2 foci facilitates plasmid capture, from a very broad distribution, towards the nucleoid and plasmid pairing. parS-bound ω2 promotes redistribution of (δ:GFP)2, leading to the dynamic release of (δ:GFP)2 from the nucleoid, in a process favored by ATP hydrolysis and protein-protein interaction. (δD60A:GFP)2, which binds but cannot hydrolyze ATP, also forms unstable complexes on the nucleoid. In the presence of ω2, (δD60A:GFP)2 accumulates foci or patched structures on the nucleoid. We propose that (δ:GFP)2 binding to different nucleoid regions and to ω2-parS might generate (δ:GFP)2 gradients that could direct plasmid movement. The iterative pairing and unpairing cycles may tether plasmids equidistantly on the nucleoid to ensure faithful plasmid segregation by a mechanism compatible with the diffusion-ratchet mechanism as proposed from in vitro reconstituted systems. PMID:26161642

  15. Spectral diffraction efficiency characterization of broadband diffractive optical elements.

    SciTech Connect

    Choi, Junoh; Cruz-Cabrera, Alvaro Augusto; Tanbakuchi, Anthony

    2013-03-01

    Diffractive optical elements, with their thin profile and unique dispersion properties, have been studied and utilized in a number of optical systems, often yielding smaller and lighter systems. Despite the interest in and study of diffractive elements, the application has been limited to narrow spectral bands. This is due to the etch depths, which are optimized for optical path differences of only a single wavelength, consequently leading to rapid decline in efficiency as the working wavelength shifts away from the design wavelength. Various broadband diffractive design methodologies have recently been developed that improve spectral diffraction efficiency and expand the working bandwidth of diffractive elements. We have developed diffraction efficiency models and utilized the models to design, fabricate, and test two such extended bandwidth diffractive designs.

  16. Non Specular Diffractive Optics

    NASA Astrophysics Data System (ADS)

    Wang, Yunjin; Overcash, Dan; Morawice, Pawel; Yin, Ming; Datta, Timir

    2009-11-01

    Geometrically decorated two-dimensional (2D) discrete surfaces can be more effective than conventional smooth reflectors in managing wave radiation. Constructive non-specular wave scattering permits the scattering angle to be other than twice that of incidence and can result in gross violations of the law of reflection. A wide range of novel reflective behaviors ensues; including the phenomenon of negative reflection were energy transport remains on the same side of the normal. Also, at a critical incidence coherent superposition can force both the transmitted and reflected waves to graze the scattering surface thus synergistically reinforcing the diffractive process in a behavior reminiscent of critical internal reflection of ray optics. We experimentally demonstrate the concept with measurements on a one-dimensionally periodic system (grating) where the scattering angle is shown to be an inverse circular function of a function that depends on the diffractive index and the two angles. Excellent agreement is found between experimental data and theory. A preliminary report on our observations will be discussed.

  17. Keyhole coherent diffractive imaging

    NASA Astrophysics Data System (ADS)

    Abbey, Brian; Nugent, Keith A.; Williams, Garth J.; Clark, Jesse N.; Peele, Andrew G.; Pfeifer, Mark A.; de Jonge, Martin; McNulty, Ian

    2008-05-01

    The availability of third-generation synchrotrons and ultimately X-ray free-electron lasers is driving the development of many new methods of microscopy. Among these techniques, coherent diffractive imaging (CDI) is one of the most promising, offering nanometre-scale imaging of non-crystallographic samples. Image reconstruction from a single diffraction pattern has hitherto been possible only for small, isolated samples, presenting a fundamental limitation on the CDI method. Here we report on a form of imaging we term `keyhole' CDI, which can reconstruct objects of arbitrary size. We demonstrate the technique using visible light and X-rays, with the latter producing images of part of an extended object with a detector-limited resolution of better than 20nm. Combining the improved resolution of modern X-ray optics with the wavelength-limited resolution of CDI, the method paves the way for detailed imaging of a single quantum dot or of a small virus within a complex host environment.

  18. Hard diffraction in Pythia 8

    NASA Astrophysics Data System (ADS)

    Overgaard Rasmussen, Christine

    2016-07-01

    We present an overview of the options for diffraction implemented in the general-purpose event generator Pythia 8 [1]. We review the existing model for soft diffraction and present a new model for hard diffraction. Both models use the Pomeron approach pioneered by Ingelman and Schlein, factorising the diffractive cross section into a Pomeron flux and a Pomeron PDF, with several choices for both implemented in Pythia 8. The model of hard diffraction is implemented as a part of the multiparton interactions (MPI) framework, thus introducing a dynamical gap survival probability that explicitly breaks factorisation.

  19. Phase shifting diffraction interferometer

    DOEpatents

    Sommargren, G.E.

    1996-08-29

    An interferometer which has the capability of measuring optical elements and systems with an accuracy of {lambda}/1000 where {lambda} is the wavelength of visible light. Whereas current interferometers employ a reference surface, which inherently limits the accuracy of the measurement to about {lambda}/50, this interferometer uses an essentially perfect spherical reference wavefront generated by the fundamental process of diffraction. This interferometer is adjustable to give unity fringe visibility, which maximizes the signal-to-noise, and has the means to introduce a controlled prescribed relative phase shift between the reference wavefront and the wavefront from the optics under test, which permits analysis of the interference fringe pattern using standard phase extraction algorithms. 8 figs.

  20. Phase shifting diffraction interferometer

    DOEpatents

    Sommargren, Gary E.

    1996-01-01

    An interferometer which has the capability of measuring optical elements and systems with an accuracy of .lambda./1000 where .lambda. is the wavelength of visible light. Whereas current interferometers employ a reference surface, which inherently limits the accuracy of the measurement to about .lambda./50, this interferometer uses an essentially perfect spherical reference wavefront generated by the fundamental process of diffraction. This interferometer is adjustable to give unity fringe visibility, which maximizes the signal-to-noise, and has the means to introduce a controlled prescribed relative phase shift between the reference wavefront and the wavefront from the optics under test, which permits analysis of the interference fringe pattern using standard phase extraction algorithms.

  1. Multilayer diffraction grating

    DOEpatents

    Barbee, T.W. Jr.

    1990-04-10

    This invention is for a reflection diffraction grating that functions at X-ray to VUV wavelengths and at normal angles of incidence. The novel grating is comprised of a laminar grating of period D with flat-topped grating bars. A multiplicity of layered synthetic microstructures, of period d and comprised of alternating flat layers of two different materials, are disposed on the tops of the grating bars of the laminar grating. In another embodiment of the grating, a second multiplicity of layered synthetic microstructures are also disposed on the flat faces, of the base of the grating, between the bars. D is in the approximate range from 3,000 to 50,000 Angstroms, but d is in the approximate range from 10 to 400 Angstroms. The laminar grating and the layered microstructures cooperatively interact to provide many novel and beneficial instrumentational advantages. 2 figs.

  2. Multilayer diffraction grating

    DOEpatents

    Barbee, Jr., Troy W.

    1990-01-01

    This invention is for a reflection diffraction grating that functions at X-ray to VUV wavelengths and at normal angles of incidence. The novel grating is comprised of a laminar grating of period D with flat-topped grating bars. A multiplicity of layered synthetic microstructures, of period d and comprised of alternating flat layers of two different materials, are disposed on the tops of the grating bars of the laminar grating. In another embodiment of the grating, a second multiplicity of layered synthetic microstructures are also disposed on the flat faces, of the base of the grating, between the bars. D is in the approximate range from 3,000 to 50,000 Angstroms, but d is in the approximate range from 10 to 400 Angstroms. The laminar grating and the layered microstructures cooperatively interact to provide many novel and beneficial instrumentational advantages.

  3. Dichroic Coherent Diffractive Imaging

    NASA Astrophysics Data System (ADS)

    Tripathi, Ashish

    Understanding electronic structure at nanometer resolution is crucial to understanding physics such as phase separation and emergent behavior in correlated electron materials. Nondestructive probes which have the ability to see beyond surfaces on nanometer length and sub-picosecond time scales can greatly enhance our understanding of these systems and will impact development of future technologies, such as magnetic storage. Polarized x-rays are an appealing choice of probe due to their penetrating power, elemental and magnetic specificity, and high spatial resolution. The resolution of traditional x-ray microscopy is limited by the nanometer precision required to fabricate x-ray optics. In this thesis, a novel approach to lensless imaging of an extended magnetic nanostructure is presented. We demonstrate this approach by imaging ferrimagnetic "maze" domains in a Gd/Fe multilayer with perpendicular anisotropy. A series of dichroic coherent diffraction patterns, ptychographically recorded, are numerically inverted using non-convex and non-linear optimization theory, and we follow the magnetic domain configuration evolution through part of its magnetization hysteresis loop by applying an external magnetic field. Unlike holographic methods, it does not require a reference wave or precision optics, and so is a far simpler experiment. In addition, it enables the imaging of samples with arbitrarily large spatial dimensions, at a spatial resolution limited solely by the coherent x-ray flux and wavelength. It can readily be extended to other non-magnetic systems that exhibit circular or linear dichroism. This approach is scalable to imaging with diffraction-limited resolution, a prospect rapidly becoming a reality in view of the new generation of phenomenally brilliant x-ray sources.

  4. Comparative cactus architecture and par interception

    SciTech Connect

    Geller, G.N.; Nobel, P.S. )

    1987-07-01

    Because CO{sup 2} uptake by cacti can be limited by low levels of photosynthetically active radiation (PAR) and because plant form affects PAR interception, various cactus forms were studied using a computer model, field measurements, and laboratory phototropic studies. Model predictions indicated that CO{sub 2} uptake by individual stems at an equinox was greatest when the stem were vertical, but at the summer and the winter solstice CO{sub 2} uptake was greatest for stems titled 30{degree} away from the equator. Stem tilting depended on form and taxonomic group. Not only can the shape of cacti be affected by PAR, but also shape influences PAR interception and hence CO{sub 2} uptake.

  5. Results on hard diffractive production

    SciTech Connect

    Goulianos, K.

    1995-07-01

    The results of experiments at hadron colliders probing the structure of the pomeron through hard diffraction are reviewed. Some results on deep inelastic diffractive scattering obtained a HERA are also discussed and placed in perspective. By using a properly normalized pomeron flux factor in single diffraction dissociation, as dictated by unitarity, the pomeron emerges as a combination of valence quark and gluon color singlets in a ratio suggested by asymptopia.

  6. Proteinase-activated receptor-1 (PAR(1)) and PAR(2) but not PAR(4) mediate contraction in human and guinea-pig gallbladders.

    PubMed

    Lee, M-C; Huang, S-C

    2008-04-01

    Proteinase-activated receptor-1 (PAR(1)) and PAR(2) mediate contraction in the guinea-pig gallbladder. To investigate and compare the effects mediated by PARs in the human gallbladder with those in the guinea-pig gallbladder, we measured contractions of isolated human and guinea-pig gallbladder strips caused by PAR agonists. Results in human were similar to those in guinea-pig gallbladder. The PAR(1) agonists, thrombin, TFLLR-NH2 and SFLLRN-NH2, as well as the PAR(2) agonists, trypsin, SLIGKV-NH2 and SLIGRL-NH2, caused contraction in both human and guinea-pig gallbladders. These indicate the existence of PAR(1) and PAR(2) mediating gallbladder contraction. Furthermore, the existence of PAR(1) and PAR(2) in the human gallbladder was confirmed by reverse transcription-polymerase chain reaction. In contrast, FSLLR-NH2, a PAR(1) control peptide, and VKGILS-NH2, a PAR(2) control peptide, as well as three PAR(4) agonists, GYPGKF-NH2, GYPGQV-NH2 and AYPGKF-NH2, did not cause any contraction or relaxation. The contractile responses to TFLLR-NH2, SFLLRN-NH2 and trypsin in both human and guinea-pig gallbladders were insensitive to atropine and tetrodotoxin, suggesting direct effects. These results demonstrate that, similar to the guinea-pig gallbladder, both PAR(1) and PAR(2) but not PAR(4) mediate muscle contraction in the human gallbladder. PAR(1) and PAR(2) may play important roles in the control of both human and guinea-pig gallbladder motility. PMID:18179608

  7. Parádsasvárite, a new member of the malachite-rosasite group from Parádsasvár, Mátra Mountains, Hungary

    NASA Astrophysics Data System (ADS)

    Fehér, Béla; Szakáll, Sándor; Zajzon, Norbert; Mihály, Judith

    2015-08-01

    Parádsasvárite (IMA No. 2012-077) was found in the Nagy-Lápafő area, Parádsasvár, Mátra Mountains, Hungary. It forms pale beige, globular aggregates up to 0.2 mm in diameter on calcite. Associated secondary minerals are smithsonite, hemimorphite, hydrozincite, aurichalcite and rosasite. The mineral was formed as an alteration product of sphalerite and chalcopyrite in a carbonate-rich environment. Parádsasvárite is translucent with a weakly vitreous, dull or silky lustre and white streak. Its Mohs hardness is about 2-3, cleavage and parting were not observed. It is brittle; the fracture is finely fibrous. Average of nine electron-microprobe analyses gave ZnO 58.08, CuO 12.60, PbO 1.27, CO2 (calc.) 19.50, H2O (calc.) 7.94, total 99.39 wt.%, corresponding to the empirical formula (Zn0.62Cu0.36Pb0.01)Σ0.99Zn1.00(CO3)(OH)2. The seven strongest lines in the X-ray powder diffraction pattern are [dhkl in Å (Iobs %, hkl)] 6.054 (67, 200), 5.085 (100, 210), 3.703 (87, 310 and 220), 3.021 (25, 400 and 130), 2.971 (25, -211 and 001), 2.603 (62, -221) and 2.539 (36, 420). According to its X-ray powder diffraction data and chemical formula, parádsasvárite belongs to the malachite-rosasite group and it is isostructural with rosasite. It is monoclinic, space group P21/ a, a = 12.92(1), b = 9.372(7), c = 3.159(4) Å, β = 110.4(1)°, V = 358.5(5) Å3, Z = 4.

  8. Proteinase-activated receptor-1 (PAR1) and PAR2 mediate relaxation of guinea pig internal anal sphincter.

    PubMed

    Huang, Shih-Che

    2014-02-10

    Activation of proteinase-activated receptor-1 (PAR1) and PAR2 stimulates contraction of the rat but relaxation of the guinea pig colon. The aim of the present study was to investigate PAR effects on internal anal sphincter (IAS) motility. We measured relaxation of isolated muscle strips from the guinea pig IAS caused by PAR agonists using isometric transducers. Reverse transcription polymerase chain reaction (RT-PCR) was performed to determine the existence of PAR. In the IAS, thrombin and PAR1 peptide agonists TFLLR-NH2 and SFLLRN-NH2 evoked moderate to marked relaxation in a concentration-dependent manner. In addition, trypsin and PAR2 peptide agonists 2-furoyl-LIGRLO-NH2, SLIGRL-NH2 and SLIGKV-NH2 produced relaxation. In contrast, both PAR1 and PAR2 inactive control peptides did not elicit relaxation. Furthermore, the selective PAR1 antagonist vorapaxar and PAR2 antagonist GB 83 specifically inhibited thrombin and trypsin-induced relaxations, respectively. RT-PCR revealed the presence of PAR1 and PAR2 in the IAS. This indicates that PAR1 and PAR2 mediate the IAS relaxation. The relaxant responses of TFLLR-NH2 and trypsin were attenuated by N(omega)-Nitro-L-arginine (L-NNA), indicating involvement of NO. These responses were not affected by tetrodotoxin, implying that the PAR effects are not neurally mediated. On the other hand, PAR4 agonists GYPGKF-NH2, GYPGQV-NH2 and AYPGKF-NH2 did not cause relaxation or contraction, suggesting that PAR4 is not involved in the sphincter motility. Taken together, these results demonstrate that both PAR1 and PAR2 mediate relaxation of the guinea pig IAS through the NO pathway. PAR1 and PAR2 may regulate IAS tone and might be potential therapeutic targets for anal motility disorders. PMID:24631471

  9. Study of optical Laue diffraction

    SciTech Connect

    Chakravarthy, Giridhar E-mail: aloksharan@email.com; Allam, Srinivasa Rao E-mail: aloksharan@email.com; Satyanarayana, S. V. M. E-mail: aloksharan@email.com; Sharan, Alok E-mail: aloksharan@email.com

    2014-10-15

    We present the study of the optical diffraction pattern of one and two-dimensional gratings with defects, designed using desktop pc and printed on OHP sheet using laser printer. Gratings so prepared, using novel low cost technique provides good visual aid in teaching. Diffraction pattern of the monochromatic light (632.8nm) from the grating so designed is similar to that of x-ray diffraction pattern of crystal lattice with point defects in one and two-dimensions. Here both optical and x-ray diffractions are Fraunhofer. The information about the crystalline lattice structure and the defect size can be known.

  10. Electrically-programmable diffraction grating

    DOEpatents

    Ricco, Antonio J.; Butler, Michael A.; Sinclair, Michael B.; Senturia, Stephen D.

    1998-01-01

    An electrically-programmable diffraction grating. The programmable grating includes a substrate having a plurality of electrodes formed thereon and a moveable grating element above each of the electrodes. The grating elements are electrostatically programmable to form a diffraction grating for diffracting an incident beam of light as it is reflected from the upper surfaces of the grating elements. The programmable diffraction grating, formed by a micromachining process, has applications for optical information processing (e.g. optical correlators and computers), for multiplexing and demultiplexing a plurality of light beams of different wavelengths (e.g. for optical fiber communications), and for forming spectrometers (e.g. correlation and scanning spectrometers).

  11. CDF experimental results on diffraction

    SciTech Connect

    Gallinaro, Michele; /Rockefeller U.

    2009-04-01

    Experimental results on diffraction from the Fermilab Tevatron collider obtained by the CDF experiment are reviewed and compared. We report on the diffractive structure function obtained from dijet production in the range 0 < Q{sup 2} < 10,000 GeV{sup 2}, and on the |t| distribution in the region 0 < |t| < 1 GeV{sup 2} for both soft and hard diffractive events up to Q{sup 2} {approx} 4,500 GeV{sup 2}. Results on single diffractive W/Z production, forward jets, and central exclusive production of both dijets and diphotons are also presented.

  12. Techniques for measuring intercepted and absorbed PAR in corn canopies

    NASA Technical Reports Server (NTRS)

    Gallo, K. P.; Daughtry, C. S. T.

    1984-01-01

    The quantity of radiation potentially available for photosynthesis that is captured by the crop is best described as absorbed photosynthetically active radiation (PAR). Absorbed PAR (APAR) is the difference between descending and ascending fluxes. The four components of APAR were measured above and within two planting densities of corn (Zea mays L.) and several methods of measuring and estimating APAR were examined. A line quantum sensor that spatially averages the photosynthetic photon flux density provided a rapid and portable method of measuring APAR. PAR reflectance from the soil (Typic Argiaquoll) surface decreased from 10% to less than 1% of the incoming PAR as the canopy cover increased. PAR reflectance from the canopy decreased to less than 3% at maximum vegetative cover. Intercepted PAR (1 - transmitted PAR) generally overestimated absorbed PAR by less than 4% throughout most of the growing season. Thus intercepted PAR appears to be a reasonable estimate of absorbed PAR.

  13. Computer Simulation of Diffraction Patterns.

    ERIC Educational Resources Information Center

    Dodd, N. A.

    1983-01-01

    Describes an Apple computer program (listing available from author) which simulates Fraunhofer and Fresnel diffraction using vector addition techniques (vector chaining) and allows user to experiment with different shaped multiple apertures. Graphics output include vector resultants, phase difference, diffraction patterns, and the Cornu spiral…

  14. Ptychographic Fresnel coherent diffractive imaging

    NASA Astrophysics Data System (ADS)

    Vine, D. J.; Williams, G. J.; Abbey, B.; Pfeifer, M. A.; Clark, J. N.; de Jonge, M. D.; McNulty, I.; Peele, A. G.; Nugent, K. A.

    2009-12-01

    This paper reports improved reconstruction of complex wave fields from extended objects. The combination of ptychography with Fresnel diffractive imaging results in better reconstructions with fewer iterations required to convergence than either method considered separately. The method is applied to retrieve the projected thickness of a gold microstructure and comparative results using ptychography and Fresnel diffractive imaging are presented.

  15. Color Perception with Diffraction Gratings.

    ERIC Educational Resources Information Center

    Kruglak, Haym; Campbell, Don

    1983-01-01

    Describes an experiment enabling students to apply concept of diffraction, determine limits of their color perception, learn how to measure wavelength with a simple apparatus, observe continuous and line spectra, and associate colors with corresponding wavelengths. The homemade diffraction-grating spectrometer used is easily constructed. (JN)

  16. PAR polarity: from complexity to design principles.

    PubMed

    Goehring, Nathan W

    2014-11-01

    The par-titioning-defective or PAR proteins comprise the core of an essential cell polarity network that underlies polarization in a wide variety of cell types and developmental contexts. The output of this network in nearly every case is the establishment of opposing and complementary membrane domains that define a cell׳s polarity axis. Yet, behind this simple pattern is a complex system of interactions, regulation and dynamic behaviors. How these various parts combine to generate polarized patterns of protein localization in cells is only beginning to become clear. This review, part of the Special Issue on Cell Polarity, aims to highlight several emerging themes and design principles that underlie the process of cell polarization by components of the PAR network. PMID:25128809

  17. Photoinduced diffraction in polymer waveguides.

    PubMed

    Andrews, J H; Singer, K D

    1993-11-20

    We report on techniques for measuring photoinduced diffraction in prism-coupled slab polymer waveguides. Diffraction effects resulting from photochromic gratings in slab waveguides of Disperse Red 1 dye in polymethylmethacrylate were studied. Optical damage in the form of diffractive mode conversion was observed when we coupled in light with a wavelength slightly longer than the absorption edge of Disperse Red 1 dye. Slowly growing satellite beams in the outcoupled light were attributed to anisotropic scattering between the lowest-order TE mode and the lowest-order TM mode caused by self-diffraction from a grating produced through the photochromic effect. We have also investigated the effect of mode-coupling changes on the determination of diffraction efficiency and sensitivity in waveguide experiments. Diffraction efficiencies predicted by measurements of the modulation depth in the guide are found to overstate the actual diffraction efficiencies that could be observed in this geometry. Techniques for overc ming this limitation and for improving estimates of the energy density and interaction length in the guide are noted.

  18. Electromagnetic diffraction efficiencies for plane reflection diffraction gratings

    NASA Technical Reports Server (NTRS)

    Marathay, A. S.; Shrode, T. E.

    1973-01-01

    Results are presented of research activities on holographic grating research. A large portion of this work was performed using rigorous vector diffraction theory, therefore, the necessary theory has been included in this report. The diffraction efficiency studies were continued using programs based on a rigorous theory. The simultaneous occurrence of high diffraction efficiencies and the phenomenon of double Wood's anomalies is demonstrated along with a graphic method for determining the necessary grating parameters. Also, an analytical solution for a grating profile that is perfectly blazed is obtained. The performance of the perfectly blazed grating profile is shown to be significantly better than grating profiles previously studied. Finally, a proposed method is described for the analysis of coarse echelle gratings using rigorous vector diffraction that is currently being developed.

  19. Humanizing the Protease-Activated Receptor (PAR) Expression Profile in Mouse Platelets by Knocking PAR1 into the Par3 Locus Reveals PAR1 Expression Is Not Tolerated in Mouse Platelets

    PubMed Central

    French, Shauna L.; Paramitha, Antonia C.; Moon, Mitchell J.; Dickins, Ross A.; Hamilton, Justin R.

    2016-01-01

    Anti-platelet drugs are the mainstay of pharmacotherapy for heart attack and stroke prevention, yet improvements are continually sought. Thrombin is the most potent activator of platelets and targeting platelet thrombin receptors (protease-activated receptors; PARs) is an emerging anti-thrombotic approach. Humans express two PARs on their platelets–PAR1 and PAR4. The first PAR1 antagonist was recently approved for clinical use and PAR4 antagonists are in early clinical development. However, pre-clinical studies examining platelet PAR function are challenging because the platelets of non-primates do not accurately reflect the PAR expression profile of human platelets. Mice, for example, express Par3 and Par4. To address this limitation, we aimed to develop a genetically modified mouse that would express the same repertoire of platelet PARs as humans. Here, human PAR1 preceded by a lox-stop-lox was knocked into the mouse Par3 locus, and then expressed in a platelet-specific manner (hPAR1-KI mice). Despite correct targeting and the predicted loss of Par3 expression and function in platelets from hPAR1-KI mice, no PAR1 expression or function was detected. Specifically, PAR1 was not detected on the platelet surface nor internally by flow cytometry nor in whole cell lysates by Western blot, while a PAR1-activating peptide failed to induce platelet activation assessed by either aggregation or surface P-selectin expression. Platelets from hPAR1-KI mice did display significantly diminished responsiveness to thrombin stimulation in both assays, consistent with a Par3-/- phenotype. In contrast to the observations in hPAR1-KI mouse platelets, the PAR1 construct used here was successfully expressed in HEK293T cells. Together, these data suggest ectopic PAR1 expression is not tolerated in mouse platelets and indicate a different approach is required to develop a small animal model for the purpose of any future preclinical testing of PAR antagonists as anti-platelet drugs. PMID

  20. Diffraction techniques in engineering applications

    SciTech Connect

    Kozarczek, K.J.; Hubbard, C.R.; Watkins, T.R.; Wang, X.L.; Spooner, S.

    1995-12-31

    Diffraction techniques applied to crystalline materials provide quantitative information about the crystallographic structure and mechanical condition of the material. Those two characteristics influence the chemical, physical, and mechanical properties of a Component. A concerted application of x-ray and neutron diffraction allows one to comprehensively study the bulk and subsurface variations of such material characteristics as crystallographic texture, residual stress, and cold work. The Residual Stress User Center at the Oak Ridge National Laboratory offers academic and industrial researchers both neutron and x-ray diffraction capabilities. Recent examples of the application of work related to thin film, metal, ceramic and composite material technologies are presented.

  1. Diffraction effects in freeform optics

    NASA Astrophysics Data System (ADS)

    Ricketts, Melissa N.; Winston, Roland; Oliker, Vladimir

    2015-08-01

    Freeform optics is a relatively new field; it uses the methods necessary to describe surfaces lacking symmetry, and/or surfaces that create non-symmetrical irradiance distributions. The Supporting Quadrics Method (SQM) developed by Oliker is a superb for generating any desired irradiance distribution. The SQM uses an envelope of quadrics to create prescribed irradiance distributions. These optical systems are tested in ray trace software, where diffraction effects are not taken into account. It is important to understand the diffraction effects present in an optic, when moving from the ray trace stage to the prototype stage. Here we study the diffraction effects of Supporting Quadrics Method.

  2. Diffractive optics in adverse environments

    NASA Technical Reports Server (NTRS)

    Behrmann, Gregory P.

    1993-01-01

    An investigation at the Army Research Laboratory is in progress to characterize DOE performance in mil-spec environments. One of the most significant environmental influences is temperature. An analysis of a diffractive lens is presented in which optical performance is described as a function of temperature. In particular, we review the thermal dependence of focal length and diffraction efficiency. It is shown that the change in these parameters is independent of lens shape and relates only to material properties. Thermalized hybrid refractive/diffractive designs are discussed.

  3. Cloning, expression, purification, crystallization and preliminary crystallographic analysis of the C-terminal domain of Par-4 (PAWR)

    PubMed Central

    Tiruttani Subhramanyam, Udaya Kumar; Kubicek, Jan; Eidhoff, Ulf B.; Labahn, Joerg

    2014-01-01

    Prostate apoptosis response-4 protein is an intrinsically disordered pro-apoptotic protein with tumour suppressor function. Par-4 is known for its selective induction of apoptosis in cancer cells only and its ability to interact with various apoptotic proteins via its C-terminus. Par-4, with its unique function and various interacting partners, has gained importance as a potential target for cancer therapy. The C-terminus of the rat homologue of Par-4 was crystallized and a 3.7 Å resolution X-ray diffraction data set was collected. Preliminary data analysis shows the space group to be P41212. The unit-cell parameters are a = b = 115.351, c = 123.663 Å, α = β = γ = 90°. PMID:25195896

  4. Electrically-programmable diffraction grating

    DOEpatents

    Ricco, A.J.; Butler, M.A.; Sinclair, M.B.; Senturia, S.D.

    1998-05-26

    An electrically-programmable diffraction grating is disclosed. The programmable grating includes a substrate having a plurality of electrodes formed thereon and a moveable grating element above each of the electrodes. The grating elements are electrostatically programmable to form a diffraction grating for diffracting an incident beam of light as it is reflected from the upper surfaces of the grating elements. The programmable diffraction grating, formed by a micromachining process, has applications for optical information processing (e.g. optical correlators and computers), for multiplexing and demultiplexing a plurality of light beams of different wavelengths (e.g. for optical fiber communications), and for forming spectrometers (e.g. correlation and scanning spectrometers). 14 figs.

  5. Femtosecond single-electron diffraction

    PubMed Central

    Lahme, S.; Kealhofer, C.; Krausz, F.; Baum, P.

    2014-01-01

    Ultrafast electron diffraction allows the tracking of atomic motion in real time, but space charge effects within dense electron packets are a problem for temporal resolution. Here, we report on time-resolved pump-probe diffraction using femtosecond single-electron pulses that are free from intra-pulse Coulomb interactions over the entire trajectory from the source to the detector. Sufficient average electron current is achieved at repetition rates of hundreds of kHz. Thermal load on the sample is avoided by minimizing the pump-probe area and by maximizing heat diffusion. Time-resolved diffraction from fibrous graphite polycrystals reveals coherent acoustic phonons in a nanometer-thick grain ensemble with a signal-to-noise level comparable to conventional multi-electron experiments. These results demonstrate the feasibility of pump-probe diffraction in the single-electron regime, where simulations indicate compressibility of the pulses down to few-femtosecond and attosecond duration. PMID:26798778

  6. Diffraction by random Ronchi gratings.

    PubMed

    Torcal-Milla, Francisco Jose; Sanchez-Brea, Luis Miguel

    2016-08-01

    In this work, we obtain analytical expressions for the near-and far-field diffraction of random Ronchi diffraction gratings where the slits of the grating are randomly displaced around their periodical positions. We theoretically show that the effect of randomness in the position of the slits of the grating produces a decrease of the contrast and even disappearance of the self-images for high randomness level at the near field. On the other hand, it cancels high-order harmonics in far field, resulting in only a few central diffraction orders. Numerical simulations by means of the Rayleigh-Sommerfeld diffraction formula are performed in order to corroborate the analytical results. These results are of interest for industrial and technological applications where manufacture errors need to be considered.

  7. Diffraction by random Ronchi gratings.

    PubMed

    Torcal-Milla, Francisco Jose; Sanchez-Brea, Luis Miguel

    2016-08-01

    In this work, we obtain analytical expressions for the near-and far-field diffraction of random Ronchi diffraction gratings where the slits of the grating are randomly displaced around their periodical positions. We theoretically show that the effect of randomness in the position of the slits of the grating produces a decrease of the contrast and even disappearance of the self-images for high randomness level at the near field. On the other hand, it cancels high-order harmonics in far field, resulting in only a few central diffraction orders. Numerical simulations by means of the Rayleigh-Sommerfeld diffraction formula are performed in order to corroborate the analytical results. These results are of interest for industrial and technological applications where manufacture errors need to be considered. PMID:27505363

  8. ParA and ParB coordinate chromosome segregation with cell elongation and division during Streptomyces sporulation

    PubMed Central

    Donczew, Magdalena; Mackiewicz, Paweł; Wróbel, Agnieszka; Flärdh, Klas; Zakrzewska-Czerwińska, Jolanta

    2016-01-01

    In unicellular bacteria, the ParA and ParB proteins segregate chromosomes and coordinate this process with cell division and chromosome replication. During sporulation of mycelial Streptomyces, ParA and ParB uniformly distribute multiple chromosomes along the filamentous sporogenic hyphal compartment, which then differentiates into a chain of unigenomic spores. However, chromosome segregation must be coordinated with cell elongation and multiple divisions. Here, we addressed the question of whether ParA and ParB are involved in the synchronization of cell-cycle processes during sporulation in Streptomyces. To answer this question, we used time-lapse microscopy, which allows the monitoring of growth and division of single sporogenic hyphae. We showed that sporogenic hyphae stop extending at the time of ParA accumulation and Z-ring formation. We demonstrated that both ParA and ParB affect the rate of hyphal extension. Additionally, we showed that ParA promotes the formation of massive nucleoprotein complexes by ParB. We also showed that FtsZ ring assembly is affected by the ParB protein and/or unsegregated DNA. Our results indicate the existence of a checkpoint between the extension and septation of sporogenic hyphae that involves the ParA and ParB proteins. PMID:27248800

  9. New CDF results on diffraction

    SciTech Connect

    Mesropian, Christina; /Rockefeller U.

    2006-12-01

    We report new diffraction results obtained by the CDF collaboration in proton-antiproton collisions at the Fermilab Tevatron collider at {radical}s=1.96 TeV. The first experimental evidence of exclusive dijet and diphoton production is presented. The exclusive results are discussed in context of the exclusive Higgs production at LHC. We also present the measurement of the Q{sup 2} and t dependence of the diffractive structure function.

  10. suPAR and Team Nephrology

    PubMed Central

    2014-01-01

    Primary focal segmental glomerulosclerosis (FSGS) accounts for nearly 10 % of patients who require renal replacement therapy. Elevated circulating levels of soluble urokinase receptor (suPAR) have been identified as a biomarker to discriminate primary FSGS from other glomerulopathies. Subsequent reports have questioned the diagnostic utility of this test. In a study in BMC Medicine, Huang et al. demonstrate that urinary soluble urokinase receptor (suPAR) excretion assists in distinguishing primary FSGS from other glomerular diseases, and that high plasma suPAR concentrations are not directly linked to a decline in glomerular filtration rate (GFR). This observation suggests that further investigation of suPAR is warranted in patients with FSGS. It should be interpreted in light of a recent report that B7-1 is expressed in the podocytes of a subset of patients with FSGS, and that blocking this molecule may represent the first successful targeted intervention for this disease. These advances highlight the rapid pace of scientific progress in the field of nephrology. Nephrologists should work together, share resources, and expedite the design of protocols to evaluate these novel biomarkers in a comprehensive and scientifically valid manner. Please see related article http://www.biomedcentral.com/1741-7015/12/81. PMID:24885021

  11. View from east to west of PAR site storage building; ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    View from east to west of PAR site storage building; formerly PAR dispensary - Stanley R. Mickelsen Safeguard Complex, Storage Building, Across street from Family Housing Units 110 & 111, Nekoma, Cavalier County, ND

  12. View from west to east of PAR site resident engineer's ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    View from west to east of PAR site resident engineer's office building (REOB) - Stanley R. Mickelsen Safeguard Complex, Resident Engineers Office Building, Southeast of intersection of PAR Access Road & Fourth Avenue, Nekoma, Cavalier County, ND

  13. Diffraction described by virtual particle momentum exchange: the "diffraction force"

    NASA Astrophysics Data System (ADS)

    Mobley, Michael J.

    2011-09-01

    Particle diffraction can be described by an ensemble of particle paths determined through a Fourier analysis of a scattering lattice where the momentum exchange probabilities are defined at the location of scattering, not the point of detection. This description is compatible with optical wave theories and quantum particle models and provides deeper insights to the nature of quantum uncertainty. In this paper the Rayleigh-Sommerfeld and Fresnel-Kirchoff theories are analyzed for diffraction by a narrow slit and a straight edge to demonstrate the dependence of particle scattering on the distance of virtual particle exchange. The quantized momentum exchange is defined by the Heisenberg uncertainty principle and is consistent with the formalism of QED. This exchange of momentum manifests the "diffraction force" that appears to be a universal construct as it applies to neutral and charged particles. This analysis indicates virtual particles might form an exchange channel that bridges the space of momentum exchange.

  14. A Combined Global and Local Approach to Elucidate Spatial Organization of the Mycobacterial ParB-parS Partition Assembly

    SciTech Connect

    B Chaudhuri; S Gupta; V Urban; M Chance; R DMello; L Smith; K Lyons; J Gee

    2011-12-31

    Combining diverse sets of data at global (size, shape) and local (residue) scales is an emerging trend for elucidating the organization and function of the cellular assemblies. We used such a strategy, combining data from X-ray and neutron scattering with H/D-contrast variation and X-ray footprinting with mass spectrometry, to elucidate the spatial organization of the ParB-parS assembly from Mycobacterium tuberculosis. The ParB-parS participates in plasmid and chromosome segregation and condensation in predivisional bacterial cells. ParB polymerizes around the parS centromere(s) to form a higher-order assembly that serves to recruit cyto-skeletal ParA ATPases and SMC proteins for chromosome segregation. A hybrid model of the ParB-parS was built by combining and correlating computational models with experiment-derived information about size, shape, position of the symmetry axis within the shape, internal topology, DNA-protein interface, exposed surface patches, and prior knowledge. This first view of the ParB-parS leads us to propose how ParB spread on the chromosome to form a larger assembly.

  15. A combined global and local approach to elucidate spatial organization of the Mycobacterial ParB-parS partition assembly.

    PubMed

    Chaudhuri, Barnali N; Gupta, Sayan; Urban, Volker S; Chance, Mark R; D'Mello, Rhijuta; Smith, Lauren; Lyons, Kelly; Gee, Jessica

    2011-03-22

    Combining diverse sets of data at global (size, shape) and local (residue) scales is an emerging trend for elucidating the organization and function of the cellular assemblies. We used such a strategy, combining data from X-ray and neutron scattering with H/D-contrast variation and X-ray footprinting with mass spectrometry, to elucidate the spatial organization of the ParB-parS assembly from Mycobacterium tuberculosis. The ParB-parS participates in plasmid and chromosome segregation and condensation in predivisional bacterial cells. ParB polymerizes around the parS centromere(s) to form a higher-order assembly that serves to recruit cyto-skeletal ParA ATPases and SMC proteins for chromosome segregation. A hybrid model of the ParB-parS was built by combining and correlating computational models with experiment-derived information about size, shape, position of the symmetry axis within the shape, internal topology, DNA-protein interface, exposed surface patches, and prior knowledge. This first view of the ParB-parS leads us to propose how ParB spread on the chromosome to form a larger assembly.

  16. A Combined Global and Local Approach to Elucidate Spatial Organization of the Mycobacterial ParB-parS Partition

    SciTech Connect

    Chaudhuri, Barnali; Gupta, Sayan; Urban, Volker S; Chance, Mark; D'Mello, Rhijuta; Smith, Lauren; Lyons, Kelly; Gee, Jessica

    2010-01-01

    Combining diverse sets of data at global (size, shape) and local (residue) scales is an emerging trend for elucidating the organization and function of the cellular assemblies. We used such a strategy, combining data from X-ray and neutron scattering with H/D-contrast variation and X-ray footprinting with mass spectrometry, to elucidate the spatial organization of the ParB-parS assembly from Mycobacterium tuberculosis. The ParB-parS participates in plasmid and chromosome segregation and condensation in predivisional bacterial cells. ParB polymerizes around the parS centromere(s) to form a higher-order assembly that serves to recruit cyto-skeletal ParA ATPases and SMC proteins for chromosome segregation. A hybrid model of the ParB-parS was built by combining and correlating computational models with experiment-derived information about size, shape, position of the symmetry axis within the shape, internal topology, DNA-protein interface, exposed surface patches, and prior knowledge. This first view of the ParB-parS leads us to propose how ParB spread on the chromosome to form a larger assembly.

  17. Electromagnetic diffraction efficiencies for plane reflection diffraction gratings

    NASA Technical Reports Server (NTRS)

    Marathay, A. S.; Shrode, T. E.

    1974-01-01

    The theory and computer programs, based on electromagnetic theory, for the analysis and design of echelle gratings were developed. The gratings are designed for instruments that operate in the ultraviolet portion of the spectrum. The theory was developed so that the resulting computer programs will be able to analyze deep (up to 30 wavelengths) gratings by including as many as 100 real or homogeneous diffraction orders. The program calculates the complex amplitude coefficient for each of the diffracted orders. A check on the numerical method used to solve the integral equations is provided by a conservation of energy calculation.

  18. Host response biomarker in sepsis: suPAR detection.

    PubMed

    Giamarellos-Bourboulis, Evangelos J; Georgitsi, Marianna

    2015-01-01

    Recent studies of our group have shown that suPAR may complement APACHE II score for risk assessment in sepsis. suPAR may be measured in serum of patients by an enzyme immunosorbent assay developed by Virogates (suPARnostic™). Production of suPAR from circulating neutrophils and monocytes may be assessed after isolation of neutrophils and monocytes and ex vivo culture. This is followed by measurement of suPAR in culture supernatants.

  19. Single Photon diffraction and interference

    NASA Astrophysics Data System (ADS)

    Hodge, John

    2015-04-01

    A previous paper based on the Scalar Theory of Everything studied photon diffraction and interference (IntellectualArchive, Vol.1, No. 3, P. 20, Toronto, Canada July 2012. http://intellectualarchive.com/?link=item&id=597). Several photons were required in the experiment at the same time. Interference experiments with one photon in the experiment at a time also showed interference patterns. The previous paper with the Bohm Interpretation, models of the screen and mask, and the Transaction Interpretation of Quantum Mechanics were combined. The reverse wave required by the Transaction Interpretation was provided by a reflected plenum wave rather than a reverse time wave. The speed of the plenum wave was assumed to be much faster than the speed of photons/light. Using the assumptions of Fraunhofer diffraction resulted in the same equation for the photon distribution on a screen as the intensity pattern of the Fraunhofer diffraction. (http://myplace.frontier.com/ ~ jchodge/)

  20. Electron diffraction by plasmon waves

    NASA Astrophysics Data System (ADS)

    García de Abajo, F. J.; Barwick, B.; Carbone, F.

    2016-07-01

    An electron beam traversing a structured plasmonic field is shown to undergo diffraction with characteristic angular patterns of both elastic and inelastic outgoing electron components. In particular, a plasmonic grating (e.g., a standing wave formed by two counterpropagating plasmons in a thin film) produces diffraction orders of the same parity as the net number of exchanged plasmons. Large diffracted beam fractions are predicted to occur for realistic plasmon intensities in attainable geometries due to a combination of phase and amplitude changes locally imprinted on the passing electron wave. Our study opens vistas in the study of multiphoton exchanges between electron beams and evanescent optical fields with unexplored effects related to the transversal component of the electron wave function.

  1. Lensless reflective point diffraction interferometer.

    PubMed

    Zhu, Wenhua; Chen, Lei; Zheng, Donghui; Yang, Ying; Han, Zhigang; Li, Jinpeng

    2016-07-01

    A lensless reflective point diffraction interferometer (LRPDI) is proposed for dynamic wavefront measurement. The point diffraction interferometer is integrated on a small substrate with properly designed thin film, which is used for generating the interferogram with high carrier frequency at a CCD target. By lensless imaging, the complex amplitude at the CCD target can be propagated to the conjugated plane of the exit pupil of an incident wavefront, which not only avoids the edge diffraction in the interferogram, but also eliminates systematic error. The accuracy of LRPDI is demonstrated by simulation and experiment, and a precision better than 1/150 wavelength is achieved. The new design with lensless imaging processing is suitable for dynamic wavefront measurement. PMID:27409204

  2. Boundary diffraction wave integrals for diffraction modeling of external occulters.

    PubMed

    Cady, Eric

    2012-07-01

    An occulter is a large diffracting screen which may be flown in conjunction with a telescope to image extrasolar planets. The edge is shaped to minimize the diffracted light in a region beyond the occulter, and a telescope may be placed in this dark shadow to view an extrasolar system with the starlight removed. Errors in position, orientation, and shape of the occulter will diffract additional light into this region, and a challenge of modeling an occulter system is to accurately and quickly model these effects. We present a fast method for the calculation of electric fields following an occulter, based on the concept of the boundary diffraction wave: the 2D structure of the occulter is reduced to a 1D edge integral which directly incorporates the occulter shape, and which can be easily adjusted to include changes in occulter position and shape, as well as the effects of sources-such as exoplanets-which arrive off-axis to the occulter. The structure of a typical implementation of the algorithm is included. PMID:22772218

  3. Detonation diffraction through different geometries

    NASA Astrophysics Data System (ADS)

    Sorin, Rémy; Zitoun, Ratiba; Khasainov, Boris; Desbordes, Daniel

    2009-04-01

    We performed the study of the diffraction of a self-sustained detonation from a cylindrical tube (of inner diameter d) through different geometric configurations in order to characterise the transmission processes and to quantify the transmission criteria to the reception chamber. For the diffraction from a tube to the open space the transmission criteria is expressed by d c = k c · λ (with λ the detonation cell size and k c depending on the mixture and on the operture configuration, classically 13 for alkane mixtures with oxygen). The studied geometries are: (a) a sharp increase of diameter ( D/ d > 1) with and without a central obstacle in the diffracting section, (b) a conical divergent with a central obstacle in the diffracting section and (c) an inversed intermediate one end closed tube insuring a double reflection before a final diffraction between the initiator tube and the reception chamber. The results for case A show that the reinitiation process depends on the ratio d/ λ. For ratios below k c the re-ignition takes place at the receptor tube wall and at a fixed distance from the step, i.e. closely after the diffracted shock reflection shows a Mach stem configuration. For ratios below a limit ratio k lim (which depends on D/ d) the re-ignition distance increases with the decrease of d/λ. For both case A and B the introduction of a central obstacle (of blockage ratio BR = 0.5) at the exit of the initiator tube decreases the critical transmission ratio k c by 50%. The results in configuration C show that the re-ignition process depends both on d/ λ and the geometric conditions. Optimal configuration is found that provides the transmission through the two successive reflections (from d = 26 mm to D ch = 200 mm) at as small d/ λ as 2.2 whatever the intermediate diameter D is. This configuration provides a significant improvement in the detonation transmission conditions.

  4. Diffraction model for thermoreflectance data.

    PubMed

    Kureshi, S; Fabris, D; Tokairin, S; Cardenas, C V; Yang, C Y

    2015-06-10

    Thermoreflectance imaging provides the capability to map temperature spatially on the submicrometer scale by using a light source and CCD camera for data acquisition. The ability to achieve such spatial resolution and observe detailed features is influenced by optical diffraction. By combining diffraction from both the sample and substrate, a model is developed to determine the intensity of the thermoreflectance signal. This model takes into account the effective optical distance, sample width, wavelength, signal phase shift, and reflectance intensity, while showing qualitative and quantitative agreement with experimental thermoreflectance images from 1 and 10 μm wide gold lines at two wavelengths.

  5. High-pressure neutron diffraction

    SciTech Connect

    Xu, Hongwu

    2011-01-10

    This lecture will cover progress and prospect of applications of high-pressure neutron diffraction techniques to Earth and materials sciences. I will first introduce general high-pressure research topics and available in-situ high-pressure techniques. Then I'll talk about high-pressure neutron diffraction techniques using two types of pressure cells: fluid-driven and anvil-type cells. Lastly, I will give several case studies using these techniques, particularly, those on hydrogen-bearing materials and magnetic transitions.

  6. Diffraction encoded position measuring apparatus

    DOEpatents

    Tansey, R.J.

    1991-09-24

    When a lightwave passes through a transmission grating, diffracted beams appear at the output or opposite side of the grating that are effectively Doppler shifted in frequency (phase) whereby a detector system can compare the phase of the zero order and higher order beams to obtain an indication of position. Multiple passes through the grating increase resolution for a given wavelength of a laser signal. The resolution can be improved further by using a smaller wavelength laser to generate the grating itself. Since the grating must only have a pitch sufficient to produce diffracted orders, inexpensive, ultraviolet wavelength lasers can be utilized and still obtain high resolution detection. 3 figures.

  7. Diffraction encoded position measuring apparatus

    DOEpatents

    Tansey, Richard J.

    1991-01-01

    When a lightwave passes through a transmission grating, diffracted beams appear at the output or opposite side of the grating that are effectively Doppler shifted in frequency (phase) whereby a detector system can compare the phase of the zero order and higher order beams to obtain an indication of position. Multiple passes through the grating increase resolution for a given wavelength of a laser signal. The resolution can be improved further by using a smaller wavelength laser to generate the grating itself. Since the grating must only have a pitch sufficient to produce diffracted orders, inexpensive, ultraviolet wavelength lasers can be utilized and still obtain high resolution detection.

  8. Proteinase-activated receptors (PARs) as targets for antiplatelet therapy.

    PubMed

    Cunningham, Margaret; McIntosh, Kathryn; Bushell, Trevor; Sloan, Graeme; Plevin, Robin

    2016-04-15

    Since the identification of the proteinase-activated receptor (PAR) family as mediators of serine protease activity in the 1990s, there has been tremendous progress in the elucidation of their pathophysiological roles. The development of drugs that target PARs has been the focus of many laboratories for the potential treatment of thrombosis, cancer and other inflammatory diseases. Understanding the mechanisms of PAR activation and G protein signalling pathways evoked in response to the growing list of endogenous proteases has yielded great insight into receptor regulation at the molecular level. This has led to the development of new selective modulators of PAR activity, particularly PAR1. The mixed success of targeting PARs has been best exemplified in the context of inhibiting PAR1 as a new antiplatelet therapy. The development of the competitive PAR1 antagonist, vorapaxar (Zontivity), has clearly shown the value in targeting PAR1 in acute coronary syndrome (ACS); however the severity of associated bleeding with this drug has limited its use in the clinic. Due to the efficacy of thrombin acting via PAR1, strategies to selectively inhibit specific PAR1-mediated G protein signalling pathways or to target the second thrombin platelet receptor, PAR4, are being devised. The rationale behind these alternative approaches is to bias downstream thrombin activity via PARs to allow for inhibition of pro-thrombotic pathways but maintain other pathways that may preserve haemostatic balance and improve bleeding profiles for widespread clinical use. This review summarizes the structural determinants that regulate PARs and the modulators of PAR activity developed to date.

  9. Les Brulures Chimiques Par Le Laurier Rose

    PubMed Central

    Bakkali, H.; Ababou, M.; Nassim Sabah, T.; Moussaoui, A.; Ennouhi, A.; Fouadi, F.Z.; Siah, S.; Ihrai, H.

    2010-01-01

    Summary Le laurier rose ou Nerium oleander est un arbuste qui pousse naturellement dans les régions méditerranéennes. Au Maroc on le trouve dans les lieux humides. Il est réputé par ses risques de toxicité systémique en cas d'empoisonnement à cause de la présence de deux alcaloïdes, surtout l'oléandrine. La littérature illustre des cas d'utilisation locale des feuilles de cette plante contre la gale, les hémorroïdes et les furoncles. Nous rapportons deux cas de brûlures chimiques par le laurier rose de gravité différente. Cela doit aboutir à une information élargie de la population, ainsi qu'une réglementation stricte de sa commercialisation. PMID:21991211

  10. Discovery of Octahydroindenes as PAR1 Antagonists

    PubMed Central

    2013-01-01

    Octahydroindene was identified as a novel scaffold for protease activated receptor 1 (PAR1) antagonists. Herein, the 2-position (C2) was explored for structure–activity relationship (SAR) studies. Compounds 14, 19, and 23b showed IC50 values of 1.3, 8.6, and 2.7 nM in a PAR1 radioligand binding assay, respectively, and their inhibitory activities on platelet activation were comparable to that of vorapaxar in a platelet rich plasma (PRP) aggregation assay. This series of compounds showed high potency and no significant cytotoxicity; however, the compounds were metabolically unstable in both human and rat liver microsomes. Current research efforts are focused on optimizing the compounds to improve metabolic stability and physicochemical properties as well as potency. PMID:24900604

  11. Combined DSEK and Transconjunctival Pars Plana Vitrectomy

    PubMed Central

    Sane, Mona; Shaikh, Naazli

    2016-01-01

    We report here three patients who underwent combined Descemet's stripping with endothelial keratoplasty and transconjunctival pars plana vitrectomy for bullous keratopathy and posterior segment pathology. A surgical technique and case histories are described. Anatomic and visual outcomes of combined Descemet's stripping with endothelial keratoplasty and vitrectomy were excellent. Our experience provides technical guidelines and limitations. The combined minimally invasive techniques allow for rapid anatomical recovery and return of function and visual acuity in a single sitting. PMID:27413563

  12. Par Pond refill water quality sampling

    SciTech Connect

    Koch, J.W. II; Martin, F.D.; Westbury, H.M.

    1996-08-01

    This study was designed to document anoxia and its cause in the event that the anoxia caused a fish kill. However, no fish kill was observed during this study, and dissolved oxygen and nutrient concentrations generally remained within the range expected for southeastern reservoirs. Par Pond water quality monitoring will continue during the second summer after refill as the aquatic macrophytes become reestablished and nutrients in the sediments are released to the water column.

  13. Fresnel Diffraction for CTR Microbunching

    SciTech Connect

    Tikhoplav, R.; Knyazik, A.; Rosenzweig, J. B.; Andonian, G.

    2009-01-22

    Laser beams of high intensities are routinely used for IFEL experiments. Such beams can potentially destroy microbunching diagnostic tools such as coherent transition radiation foils due to their low damage thresholds. Near-field Fresnel diffraction scheme for termination of CO{sub 2} laser beam has been experimentally studied and is presented in this paper. Novel THz camera was utilized for such study.

  14. Diffraction Plates for Classroom Demonstrations

    ERIC Educational Resources Information Center

    Hoover, Richard B.

    1969-01-01

    Describes the computer generation of random and regular arrays of apertures on photographic film and their applications for classroom demonstrations of the Fraunhofer patterns produced by simple and complex apertures, Babinet's principle, resolution according to the Rayleigh criterion, and many other aspects of diffraction. (LC)

  15. Phonons from neutron powder diffraction

    SciTech Connect

    Dimitrov, D.A.; Louca, D.; Roeder, H. )

    1999-09-01

    The spherically averaged structure function S([vert bar][bold q][vert bar]) obtained from pulsed neutron powder diffraction contains both elastic and inelastic scattering via an integral over energy. The Fourier transformation of S([vert bar][bold q][vert bar]) to real space, as is done in the pair density function (PDF) analysis, regularizes the data, i.e., it accentuates the diffuse scattering. We present a technique which enables the extraction of off-center ([vert bar][bold q][vert bar][ne]0) phonon information from powder diffraction experiments by comparing the experimental PDF with theoretical calculations based on standard interatomic potentials and the crystal symmetry. This procedure [dynamics from powder diffraction] has been [ital successfully] implemented as demonstrated here for two systems, a simple metal fcc Ni and an ionic crystal CaF[sub 2]. Although computationally intensive, this data analysis allows for a phonon based modeling of the PDF, and additionally provides off-center phonon information from neutron powder diffraction. [copyright] [ital 1999] [ital The American Physical Society

  16. Hard diffraction and rapidity gaps

    SciTech Connect

    Albrow, M.G.

    1994-08-01

    I describe the evolution of experiments at hadron colliders on (a) high mass diffraction (b) double pomeron exchange, from the ISR through the Sp{bar p}S to the Tevatron. I emphasize an experimental approach to the question: ``What is the pomeron?``

  17. Digital diffractive optics: Have diffractive optics entered mainstream industry yet?

    NASA Astrophysics Data System (ADS)

    Kress, Bernard; Hejmadi, Vic

    2010-05-01

    When a new technology is integrated into industry commodity products and consumer electronic devices, and sold worldwide in retail stores, it is usually understood that this technology has then entered the realm of mainstream technology and therefore mainstream industry. Such a leap however does not come cheap, as it has a double edge sword effect: first it becomes democratized and thus massively developed by numerous companies for various applications, but also it becomes a commodity, and thus gets under tremendous pressure to cut down its production and integration costs while not sacrificing to performance. We will show, based on numerous examples extracted from recent industry history, that the field of Diffractive Optics is about to undergo such a major transformation. Such a move has many impacts on all facets of digital diffractive optics technology, from the optical design houses to the micro-optics foundries (for both mastering and volume replication), to the final product integrators or contract manufacturers. The main causes of such a transformation are, as they have been for many other technologies in industry, successive technological bubbles which have carried and lifted up diffractive optics technology within the last decades. These various technological bubbles have been triggered either by real industry needs or by virtual investment hype. Both of these causes will be discussed in the paper. The adjective ""digital"" in "digital diffractive optics" does not refer only, as it is done in digital electronics, to the digital functionality of the element (digital signal processing), but rather to the digital way they are designed (by a digital computer) and fabricated (as wafer level optics using digital masking techniques). However, we can still trace a very strong similarity between the emergence of micro-electronics from analog electronics half a century ago, and the emergence of digital optics from conventional optics today.

  18. La structure de l'eau liquide: Une etude thermique par spectroscopie infrarouge

    NASA Astrophysics Data System (ADS)

    Larouche, Pascal

    mesures de diffraction des rayons X ont aussi ete analysees. Les abondances tirees de l'analyse par facteurs des spectres infrarouges permettent de calculer les fonctions de distributions radiales des deux especes. Ces fonctions offrent la possibilite de connaitre les distances relatives entre les atomes. Avec ces distances en main, l'architecture des deux especes peut etre schematisee. Ces resultats originaux, combines a ceux issus de la spectroscopie infrarouge, permettent de montrer que la premiere espece est bien organisee, c'est-a-dire que le cube defini par un atome d'oxygene et les quatre autres atomes d'oxygene avec lesquels il est en liens-H est regulier, alors que pour l'espece chaude, les dimensions du cubes sont irregulieres. La comparaison entre les deux especes montre qu'elles etablissent toujours quatre liens-H et que leurs differences resident uniquement dans la geometrie des cubes. Finalement, deux hypotheses sont formulees comme fondement d'un modele de la structure de l'eau liquide. Premierement, l'empilement des cubes des deux especes permet de representer l'eau a toutes les temperatures, l'espece froide etant garante de la stabilite du liquide, alors que l'espece chaude a un effet destabilisant; et deuxiemement, le saut du proton stabilise les liens-H, de telle sorte que lorsque l'espece chaude devient trop abondante, ces defauts provoquent un arret des sauts de protons et les liens-H ainsi affaiblis se brisent et le liquide s'evapore.

  19. Perturbation theory in electron diffraction

    NASA Astrophysics Data System (ADS)

    Bakken, L. N.; Marthinsen, K.; Hoeier, R.

    1992-12-01

    The Bloch-wave approach is used for discussing multiple inelastic electron scattering and higher-order perturbation theory in inelastic high-energy electron diffraction. In contrast to previous work, the present work describes three-dimensional diffraction so that higher-order Laue zone (HOLZ) effects are incorporated. Absorption is included and eigenvalues and eigenvectors are calculated from a structure matrix with the inclusion of an absorptive potential. Centrosymmetric as well as non-centrosymmetric crystal structures are allowed. An iteration method with a defined generalized propagation function for solving the inelastic coupling equations is described. It is shown that a similar iteration method with the same propagation function can be used for obtaining higher-order perturbation terms for the wave-function when a perturbation is added to the crystal potential. Finally, perturbation theory by matrix calculations when a general perturbation is added to the structure matrix is considered.

  20. Diffraction operators in paraxial approach

    NASA Astrophysics Data System (ADS)

    Lasso, William; Navas, Marianela; Añez, Liz; Urdaneta, Romer; Díaz, Leonardo; Torres, César O.

    2014-07-01

    Nowadays, research in the field of science education points to the creation of alternative ways of teaching contents encouraging the development of more elaborate reasoning, where a high degree of abstraction and generalization of scientific knowledge prevails. On that subject, this research shows a didactic alternative proposal for the construction of Fresnel and Fraunhoffer diffraction concepts applying the Fourier transform technique in the study of electromagnetic waves propagation in free space. Curvature transparency and Fourier sphere operators in paraxial approximation are used in order to make the usual laborious mathematical approach easier. The main result shows that the composition of optic metaxial operators results in the discovery of a simpler way out of the standard electromagnetic wave propagation in free space between a transmitter and a receptor separated from a given distance. This allows to state that the didactic proposal shown encourages the construction of Fresnel and Fraunhoffer diffraction concepts in a more effective and easier way than the traditional teaching.

  1. dxtbx: the diffraction experiment toolbox.

    PubMed

    Parkhurst, James M; Brewster, Aaron S; Fuentes-Montero, Luis; Waterman, David G; Hattne, Johan; Ashton, Alun W; Echols, Nathaniel; Evans, Gwyndaf; Sauter, Nicholas K; Winter, Graeme

    2014-08-01

    Data formats for recording X-ray diffraction data continue to evolve rapidly to accommodate new detector technologies developed in response to more intense light sources. Processing the data from single-crystal X-ray diffraction experiments therefore requires the ability to read, and correctly interpret, image data and metadata from a variety of instruments employing different experimental representations. Tools that have previously been developed to address this problem have been limited either by a lack of extensibility or by inconsistent treatment of image metadata. The dxtbx software package provides a consistent interface to both image data and experimental models, while supporting a completely generic user-extensible approach to reading the data files. The library is written in a mixture of C++ and Python and is distributed as part of the cctbx under an open-source licence at http://cctbx.sourceforge.net. PMID:25242914

  2. Phase Aberrations in Diffraction Microscopy

    SciTech Connect

    Marchesini, S; Chapman, H N; Barty, A; Howells, M R; Spence, J H; Cui, C; Weierstall, U; Minor, A M

    2005-09-29

    In coherent X-ray diffraction microscopy the diffraction pattern generated by a sample illuminated with coherent x-rays is recorded, and a computer algorithm recovers the unmeasured phases to synthesize an image. By avoiding the use of a lens the resolution is limited, in principle, only by the largest scattering angles recorded. However, the imaging task is shifted from the experiment to the computer, and the algorithm's ability to recover meaningful images in the presence of noise and limited prior knowledge may produce aberrations in the reconstructed image. We analyze the low order aberrations produced by our phase retrieval algorithms. We present two methods to improve the accuracy and stability of reconstructions.

  3. Diffraction Analysis of Solar Coronagraphs

    NASA Astrophysics Data System (ADS)

    Rabin, Douglas M.; gong, qian

    2016-05-01

    The design of a solar coronagraph is predicated on controlling diffracted and scattered light using principles dating back to Bernard Lyot in the 1930’s. The existence of many successful ground- and space-based coronagraphs testifies to our ability to apply these principles in specific cases, but it is difficult to explore a significant range of design parameters because the calculations are tricky and time-consuming. Indeed, scattered light is so design-specific that ad hoc analysis is unavoidable once guidelines from experience are used to create a first-guess system of baffles and low-scatter surfaces. Here we describe a combination of analytic and computational approaches that has the potential to explore coronagraph design space somewhat more systematically with respect to diffracted light.

  4. Neutron diffraction and Vitamin E

    NASA Astrophysics Data System (ADS)

    Harroun, T. A.

    2010-11-01

    It is generally accepted that neutron diffraction from model membrane systems is an effective biophysical technique for determining membrane structure. Here we describe an example of how deuterium labelling can elucidate the location of specific membrane soluble molecules, including a brief discussion of the technique itself. We show that deuterium labelled α-tocopherol sits upright in the bilayer, as might be expected, but at very different locations within the bilayer, depending on the degree of lipid chain unsaturation.

  5. Industrial applications of neutron diffraction

    SciTech Connect

    Felcher, G.P.

    1989-01-01

    Neutron diffraction (or, to be more general, neutron scattering) is a most versatile and universal tool, which has been widely employed to probe the structure, the dynamics and the magnetism of condensed matter. Traditionally used for fundamental research in solid state physics, this technique more recently has been applied to problems of immediate industrial interest, as illustrated in examples covering the main fields of endeavour. 14 refs., 14 figs.

  6. Modelisation par elements finis du muscle strie

    NASA Astrophysics Data System (ADS)

    Leonard, Mathieu

    Ce present projet de recherche a permis. de creer un modele par elements finis du muscle strie humain dans le but d'etudier les mecanismes engendrant les lesions musculaires traumatiques. Ce modele constitue une plate-forme numerique capable de discerner l'influence des proprietes mecaniques des fascias et de la cellule musculaire sur le comportement dynamique du muscle lors d'une contraction excentrique, notamment le module de Young et le module de cisaillement de la couche de tissu conjonctif, l'orientation des fibres de collagene de cette membrane et le coefficient de poisson du muscle. La caracterisation experimentale in vitro de ces parametres pour des vitesses de deformation elevees a partir de muscles stries humains actifs est essentielle pour l'etude de lesions musculaires traumatiques. Le modele numerique developpe est capable de modeliser la contraction musculaire comme une transition de phase de la cellule musculaire par un changement de raideur et de volume a l'aide des lois de comportement de materiau predefinies dans le logiciel LS-DYNA (v971, Livermore Software Technology Corporation, Livermore, CA, USA). Le present projet de recherche introduit donc un phenomene physiologique qui pourrait expliquer des blessures musculaires courantes (crampes, courbatures, claquages, etc.), mais aussi des maladies ou desordres touchant le tissu conjonctif comme les collagenoses et la dystrophie musculaire. La predominance de blessures musculaires lors de contractions excentriques est egalement exposee. Le modele developpe dans ce projet de recherche met ainsi a l'avant-scene le concept de transition de phase ouvrant la porte au developpement de nouvelles technologies pour l'activation musculaire chez les personnes atteintes de paraplegie ou de muscles artificiels compacts pour l'elaboration de protheses ou d'exosquelettes. Mots-cles Muscle strie, lesion musculaire, fascia, contraction excentrique, modele par elements finis, transition de phase

  7. Diffraction Techniques in Structural Biology

    PubMed Central

    Egli, Martin

    2010-01-01

    A detailed understanding of chemical and biological function and the mechanisms underlying the activities ultimately requires atomic-resolution structural data. Diffraction-based techniques such as single-crystal X-ray crystallography, electron microscopy and neutron diffraction are well established and have paved the road to the stunning successes of modern-day structural biology. The major advances achieved in the last 20 years in all aspects of structural research, including sample preparation, crystallization, the construction of synchrotron and spallation sources, phasing approaches and high-speed computing and visualization, now provide specialists and non-specialists alike with a steady flow of molecular images of unprecedented detail. The present chapter combines a general overview of diffraction methods with a step-by-step description of the process of a single-crystal X-ray structure determination experiment, from chemical synthesis or expression to phasing and refinement, analysis and quality control. For novices it may serve as a stepping-stone to more in-depth treatises of the individual topics. Readers relying on structural information for interpreting functional data may find it a useful consumer guide. PMID:20517991

  8. A Conserved Mode of Protein Recognition and Binding in a ParD−ParE Toxin−Antitoxin Complex

    SciTech Connect

    Dalton, Kevin M.; Crosson, Sean

    2010-05-06

    Toxin-antitoxin (TA) systems form a ubiquitous class of prokaryotic proteins with functional roles in plasmid inheritance, environmental stress response, and cell development. ParDE family TA systems are broadly conserved on plasmids and bacterial chromosomes and have been well characterized as genetic elements that promote stable plasmid inheritance. We present a crystal structure of a chromosomally encoded ParD-ParE complex from Caulobacter crescentus at 2.6 {angstrom} resolution. This TA system forms an {alpha}{sub 2}{beta}{sub 2} heterotetramer in the crystal and in solution. The toxin-antitoxin binding interface reveals extensive polar and hydrophobic contacts of ParD antitoxin helices with a conserved recognition and binding groove on the ParE toxin. A cross-species comparison of this complex structure with related toxin structures identified an antitoxin recognition and binding subdomain that is conserved between distantly related members of the RelE/ParE toxin superfamily despite a low level of overall primary sequence identity. We further demonstrate that ParD antitoxin is dimeric, stably folded, and largely helical when not bound to ParE toxin. Thus, the paradigmatic model in which antitoxin undergoes a disorder-to-order transition upon toxin binding does not apply to this chromosomal ParD-ParE TA system.

  9. Protease-activated receptor 1 (PAR1) signalling desensitization is counteracted via PAR4 signalling in human platelets.

    PubMed

    Fälker, Knut; Haglund, Linda; Gunnarsson, Peter; Nylander, Martina; Lindahl, Tomas L; Grenegård, Magnus

    2011-06-01

    PARs (protease-activated receptors) 1 and 4 belong to the family of G-protein-coupled receptors which induce both G(α12/13) and G(αq) signalling. By applying the specific PAR1- and PAR4-activating hexapeptides, SFLLRN and AYPGKF respectively, we found that aggregation of isolated human platelets mediated via PAR1, but not via PAR4, is abolished upon homologous receptor activation in a concentration- and time-dependent fashion. This effect was not due to receptor internalization, but to a decrease in Ca²⁺ mobilization, PKC (protein kinase C) signalling and α-granule secretion, as well as to a complete lack of dense granule secretion. Interestingly, subthreshold PAR4 activation rapidly abrogated PAR1 signalling desensitization by differentially reconstituting these affected signalling events and functional responses, which was sufficient to re-establish aggregation. The lack of ADP release and P2Y₁₂ receptor-induced G(αi) signalling accounted for the loss of the aggregation response, as mimicking G(αi/z) signalling with 2-MeS-ADP (2-methylthioadenosine-5'-O-diphosphate) or epinephrine (adrenaline) could substitute for intermediate PAR4 activation. Finally, we found that the re-sensitization of PAR1 signalling-induced aggregation via PAR4 relied on PKC-mediated release of both ADP from dense granules and fibrinogen from α-granules. The present study elucidates further differences in human platelet PAR signalling regulation and provides evidence for a cross-talk in which PAR4 signalling counteracts mechanisms involved in PAR1 signalling down-regulation. PMID:21391917

  10. Apoptosis and Tumor Resistance Conferred by Par-4

    PubMed Central

    Zhao, Yanming; Rangnekar, Vivek M.

    2009-01-01

    Par-4 is a tumor suppressor protein with a pro-apoptotic function. Epigenetic silencing of Par-4 is seen in diverse tumors, and Par-4 knockout mice develop spontaneous tumors in various tissues. Endogenous Par-4 is essential for sensitization of cells to diverse apoptotic stimuli, whereas ectopic expression of Par-4 can selectively induce apoptosis in cancer cells. The cancer-specific pro-apoptotic action of Par-4 resides in its centrally located SAC domain. This chapter reviews a novel mouse model with ubiquitous expression of the SAC domain. These SAC transgenic mice display normal development and life span, and, most importantly, are resistant to spontaneous, as well as oncogene-induced, autochthonous tumors. The tumor resistant phenotype and undetectable toxicity of SAC in vivo suggests the SAC domain possesses tremendous therapeutic potential. PMID:18836307

  11. A new model for estimating boreal forest fPAR

    NASA Astrophysics Data System (ADS)

    Majasalmi, Titta; Rautiainen, Miina; Stenberg, Pauline

    2014-05-01

    Life on Earth is continuously sustained by the extraterrestrial flux of photosynthetically active radiation (PAR, 400-700 nm) from the sun. This flux is converted to biomass by chloroplasts in green vegetation. Thus, the fraction of absorbed PAR (fPAR) is a key parameter used in carbon balance studies, and is listed as one of the Essential Climate Variables (ECV). Temporal courses of fPAR for boreal forests are difficult to measure, because of the complex 3D structures. Thus, they are most often estimated based on models which quantify the dependency of absorbed radiation on canopy structure. In this study, we adapted a physically-based canopy radiation model into a fPAR model, and compared modeled and measured fPAR in structurally different boreal forest stands. The model is based on the spectral invariants theory, and uses leaf area index (LAI), canopy gap fractions and spectra of foliage and understory as input data. The model differs from previously developed more detailed fPAR models in that the complex 3D structure of coniferous forests is described using an aggregated canopy parameter - photon recollision probability p. The strength of the model is that all model inputs are measurable or available through other simple models. First, the model was validated with measurements of instantaneous fPAR obtained with the TRAC instrument in nine Scots pine, Norway spruce and Silver birch stands in a boreal forest in southern Finland. Good agreement was found between modeled and measured fPAR. Next, we applied the model to predict temporal courses of fPAR using data on incoming radiation from a nearby flux tower and sky irradiance models. Application of the model to simulate diurnal and seasonal values of fPAR indicated that the ratio of direct-to-total incident radiation and leaf area index are the key factors behind the magnitude and variation of stand-level fPAR values.

  12. 2. HI PAR (ACQUISITION RADAR) TOWER AND ENLISTED MEN (EM) ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. HI PAR (ACQUISITION RADAR) TOWER AND ENLISTED MEN (EM) BARRACKS WITH RADAR ATTACHED. - Nike Hercules Missile Battery Summit Site, Battery Control Administration & Barracks Building, Anchorage, Anchorage, AK

  13. Diffractive dijet and W production in CDF

    SciTech Connect

    Goulianos, K.

    1998-06-01

    Results on diffractive dijet and W-boson production from CDF are reviewed and compared with predictions based on factorization of the diffractive structure function of the proton measured in deep inelastic scattering at HERA.

  14. Diffractive optics: Design, fabrication, and applications

    NASA Technical Reports Server (NTRS)

    Morris, G. Michael

    1993-01-01

    The topics are presented in viewgraph form and include the following: features, applications, surface relief diffractive optics, optical data storage, waveguide lenses, diffractive lense imaging, phase grating synthesis, sub-wavelength structured surfaces, etc.

  15. 50 years of fiber diffraction.

    PubMed

    Holmes, Kenneth C

    2010-05-01

    In 1955 Ken Holmes started working on tobacco mosaic virus (TMV) as a research student with Rosalind Franklin at Birkbeck College, London. Afterward he spent 18months as a post doc with Don Caspar and Carolyn Cohen at the Children's Hospital, Boston where he continued the work on TMV and also showed that the core of the thick filament of byssus retractor muscle from mussels is made of two-stranded alpha-helical coiled-coils. Returning to England he joined Aaron Klug's group at the newly founded Laboratory of Molecular Biology in Cambridge. Besides continuing the TMV studies, which were aimed at calculating the three-dimensional density map of the virus, he collaborated with Pringle's group in Oxford to show that two conformation of the myosin cross-bridge could be identified in insect flight muscle. In 1968 he opened the biophysics department at the Max Planck Institute for Medical Research in Heidelberg, Germany. With Gerd Rosenbaum he initiated the use of synchrotron radiation as a source for X-ray diffraction. In his lab the TMV structure was pushed to 4A resolution and showed how the RNA binds to the protein. With his co-workers he solved the structure of g-actin as a crystalline complex and then solved the structure of the f-actin filament by orientating the g-actin structure so as to give the f-actin fiber diffraction pattern. He was also able to solve the structure of the complex of actin with tropomyosin from fiber diffraction. PMID:20079849

  16. Fiber optic diffraction grating maker

    DOEpatents

    Deason, Vance A.; Ward, Michael B.

    1991-01-01

    A compact and portable diffraction grating maker comprised of a laser beam, optical and fiber optics devices coupling the beam to one or more evanescent beam splitters, and collimating lenses or mirrors directing the split beam at an appropriate photosensitive material. The collimating optics, the output ends of the fiber optic coupler and the photosensitive plate holder are all mounted on an articulated framework so that the angle of intersection of the beams can be altered at will without disturbing the spatial filter, collimation or beam quality, and assuring that the beams will always intersect at the position of the plate.

  17. Fiber optic diffraction grating maker

    DOEpatents

    Deason, V.A.; Ward, M.B.

    1991-05-21

    A compact and portable diffraction grating maker is comprised of a laser beam, optical and fiber optics devices coupling the beam to one or more evanescent beam splitters, and collimating lenses or mirrors directing the split beam at an appropriate photosensitive material. The collimating optics, the output ends of the fiber optic coupler and the photosensitive plate holder are all mounted on an articulated framework so that the angle of intersection of the beams can be altered at will without disturbing the spatial filter, collimation or beam quality, and assuring that the beams will always intersect at the position of the plate. 4 figures.

  18. Nonlinear ptychographic coherent diffractive imaging.

    PubMed

    Odstrcil, M; Baksh, P; Gawith, C; Vrcelj, R; Frey, J G; Brocklesby, W S

    2016-09-01

    Ptychographic Coherent diffractive imaging (PCDI) is a significant advance in imaging allowing the measurement of the full electric field at a sample without use of any imaging optics. So far it has been confined solely to imaging of linear optical responses. In this paper we show that because of the coherence-preserving nature of nonlinear optical interactions, PCDI can be generalised to nonlinear optical imaging. We demonstrate second harmonic generation PCDI, directly revealing phase information about the nonlinear coefficients, and showing the general applicability of PCDI to nonlinear interactions. PMID:27607631

  19. DIFFRACTION DISSOCIATION - 50 YEARS LATER.

    SciTech Connect

    WHITE, S.N.

    2005-04-27

    The field of Diffraction Dissociation, which is the subject of this workshop, began 50 years ago with the analysis of deuteron stripping in low energy collisions with nuclei. We return to the subject in a modern context- deuteron dissociation in {radical}s{sub NN} = 200 GeV d-Au collisions recorded during the 2003 RHIC run in the PHENIX experiment. At RHIC energy, d {yields} n+p proceeds predominantly (90%) through Electromagnetic Dissociation and the remaining fraction via the hadronic shadowing described by Glauber. Since the dissociation cross section has a small theoretical error we adopt this process to normalize other cross sections measured in RHIC.

  20. Undergraduate Experiment with Fractal Diffraction Gratings

    ERIC Educational Resources Information Center

    Monsoriu, Juan A.; Furlan, Walter D.; Pons, Amparo; Barreiro, Juan C.; Gimenez, Marcos H.

    2011-01-01

    We present a simple diffraction experiment with fractal gratings based on the triadic Cantor set. Diffraction by fractals is proposed as a motivating strategy for students of optics in the potential applications of optical processing. Fraunhofer diffraction patterns are obtained using standard equipment present in most undergraduate physics…

  1. Ultrafast electron diffraction from aligned molecules

    SciTech Connect

    Centurion, Martin

    2015-08-17

    The aim of this project was to record time-resolved electron diffraction patterns of aligned molecules and to reconstruct the 3D molecular structure. The molecules are aligned non-adiabatically using a femtosecond laser pulse. A femtosecond electron pulse then records a diffraction pattern while the molecules are aligned. The diffraction patterns are then be processed to obtain the molecular structure.

  2. Spectral partitioning in diffraction tomography

    SciTech Connect

    Lehman, S K; Chambers, D H; Candy, J V

    1999-06-14

    The scattering mechanism of diffraction tomography is described by the integral form of the Helmholtz equation. The goal of diffraction tomography is to invert this equation in order to reconstruct the object function from the measured scattered fields. During the forward propagation process, the spatial spectrum of the object under investigation is ''smeared,'' by a convolution in the spectral domain, across the propagating and evanescent regions of the received field. Hence, care must be taken in performing the reconstruction, as the object's spectral information has been moved into regions where it may be considered to be noise rather than useful information. This will reduce the quality and resolution of the reconstruction. We show haw the object's spectrum can be partitioned into resolvable and non-resolvable parts based upon the cutoff between the propagating and evanescent fields. Operating under the Born approximation, we develop a beam-forming on transmit approach to direct the energy into either the propagating or evanescent parts of the spectrum. In this manner, we may individually interrogate the propagating and evanescent regions of the object spectrum.

  3. Transcriptome profiling reveals links between ParS/ParR, MexEF-OprN, and quorum sensing in the regulation of adaptation and virulence in Pseudomonas aeruginosa

    PubMed Central

    2013-01-01

    Background The ParS/ParR two component regulatory system plays critical roles for multidrug resistance in Pseudomonas aeruginosa. It was demonstrated that in the presence of antimicrobials, ParR enhances bacterial survival by distinct mechanisms including activation of the mexXY efflux genes, enhancement of lipopolysaccharide modification through the arn operon, and reduction of the expression of oprD porin. Results In this study, we report on transcriptomic analyses of P. aeruginosa PAO1 wild type and parS and parR mutants growing in a defined minimal medium. Our transcriptomic analysis provides the first estimates of transcript abundance for the 5570 coding genes in P. aeruginosa PAO1. Comparative transcriptomics of P. aeruginosa PAO1 and par mutants identified a total of 464 genes regulated by ParS and ParR. Results also showed that mutations in the parS/parR system abolished expression of the mexEF-oprN operon by down-regulating the regulatory gene mexS. In addition to the known effects on drug resistance genes, transcript abundances of the quorum sensing genes (rhlIR and pqsABCDE-phnAB) were higher in both parS and parR mutants. In accordance with these results, a significant portion of the ParS/ParR regulated genes belonged to the MexEF-OprN and quorum sensing regulons. Deletion of the par genes also led to increased phenazine production and swarming motility, consistent with the up-regulation of the phenazine and rhamnolipid biosynthetic genes, respectively. Conclusion Our results link the ParS/ParR two component signal transduction system to MexEF-OprN and quorum sensing systems in P. aeruginosa. These results expand our understanding of the roles of the ParS/ParR system in the regulation of gene expression in P. aeruginosa, especially in the absence of antimicrobials. PMID:24034668

  4. Mechanism of DNA Segregation in Prokaryotes: Replicon Pairing by parC of Plasmid R1

    NASA Astrophysics Data System (ADS)

    Jensen, Rasmus Bugge; Lurz, Rudi; Gerdes, Kenn

    1998-07-01

    Prokaryotic chromosomes and plasmids encode partitioning systems that are required for DNA segregation at cell division. The systems are thought to be functionally analogous to eukaryotic centromeres and to play a general role in DNA segregation. The parA system of plasmid R1 encodes two proteins ParM and ParR, and a cis-acting centromere-like site denoted parC. The ParR protein binds to parC in vivo and in vitro. The ParM protein is an ATPase that interacts with ParR specifically bound to parC. Using electron microscopy, we show here that parC mediates efficient pairing of plasmid molecules. The pairing requires binding of ParR to parC and is stimulated by the ParM ATPase. The ParM mediated stimulation of plasmid pairing is dependent on ATP hydrolysis by ParM. Using a ligation kinetics assay, we find that ParR stimulates ligation of parC-containing DNA fragments. The rate-of-ligation was increased by wild type ParM protein but not by mutant ParM protein deficient in the ATPase activity. Thus, two independent assays show that parC mediates pairing of plasmid molecules in vitro. These results are consistent with the proposal that replicon pairing is part of the mechanism of DNA segregation in prokaryotes.

  5. Near-field diffraction of chirped gratings.

    PubMed

    Sanchez-Brea, Luis Miguel; Torcal-Milla, Francisco Jose; Morlanes, Tomas

    2016-09-01

    In this Letter, we analyze the near-field diffraction pattern produced by chirped gratings. An intuitive analytical interpretation of the generated diffraction orders is proposed. Several interesting properties of the near-field diffraction pattern can be determined, such as the period of the fringes and its visibility. Diffraction orders present different widths and also, some of them present focusing properties. The width, location, and depth of focus of the converging diffraction orders are also determined. The analytical expressions are compared to numerical simulation and experimental results, showing a high agreement. PMID:27607980

  6. Proteases in agricultural dust induce lung inflammation through PAR-1 and PAR-2 activation.

    PubMed

    Romberger, Debra J; Heires, Art J; Nordgren, Tara M; Souder, Chelsea P; West, William; Liu, Xiang-de; Poole, Jill A; Toews, Myron L; Wyatt, Todd A

    2015-08-15

    Workers exposed to aerosolized dust present in concentrated animal feeding operations (CAFOs) are susceptible to inflammatory lung diseases, such as chronic obstructive pulmonary disease. Extracts of dust collected from hog CAFOs [hog dust extract (HDE)] are potent stimulators of lung inflammatory responses in several model systems. The observation that HDE contains active proteases prompted the present study, which evaluated the role of CAFO dust proteases in lung inflammatory processes and tested whether protease-activated receptors (PARs) are involved in the signaling pathway for these events. We hypothesized that the damaging proinflammatory effect of HDE is due, in part, to the proteolytic activation of PARs, and inhibiting the proteases in HDE or disrupting PAR activation would attenuate HDE-mediated inflammatory indexes in bronchial epithelial cells (BECs), in mouse lung slices in vitro, and in a murine in vivo exposure model. Human BECs and mouse lung slice cultures stimulated with 5% HDE released significantly more of each of the cytokines measured (IL-6, IL-8, TNF-α, keratinocyte-derived chemokine/CXC chemokine ligand 1, and macrophage inflammatory protein-2/CXC chemokine ligand 2) than controls, and these effects were markedly diminished by protease inhibition. Inhibition of PARs also blunted the HDE-induced cytokine release from BECs. In addition, protease depletion inhibited HDE-induced BEC intracellular PKCα and PKCε activation. C57BL/6J mice administered 12.5% HDE intranasally, either once or daily for 3 wk, exhibited increased total cellular and neutrophil influx, bronchial alveolar fluid inflammatory cytokines, lung histopathology, and inflammatory scores compared with mice receiving protease-depleted HDE. These data suggest that proteases in dust from CAFOs are important mediators of lung inflammation, and these proteases and their receptors may provide novel targets for therapeutic intervention in CAFO dust-induced airways disease.

  7. Proteases in agricultural dust induce lung inflammation through PAR-1 and PAR-2 activation.

    PubMed

    Romberger, Debra J; Heires, Art J; Nordgren, Tara M; Souder, Chelsea P; West, William; Liu, Xiang-de; Poole, Jill A; Toews, Myron L; Wyatt, Todd A

    2015-08-15

    Workers exposed to aerosolized dust present in concentrated animal feeding operations (CAFOs) are susceptible to inflammatory lung diseases, such as chronic obstructive pulmonary disease. Extracts of dust collected from hog CAFOs [hog dust extract (HDE)] are potent stimulators of lung inflammatory responses in several model systems. The observation that HDE contains active proteases prompted the present study, which evaluated the role of CAFO dust proteases in lung inflammatory processes and tested whether protease-activated receptors (PARs) are involved in the signaling pathway for these events. We hypothesized that the damaging proinflammatory effect of HDE is due, in part, to the proteolytic activation of PARs, and inhibiting the proteases in HDE or disrupting PAR activation would attenuate HDE-mediated inflammatory indexes in bronchial epithelial cells (BECs), in mouse lung slices in vitro, and in a murine in vivo exposure model. Human BECs and mouse lung slice cultures stimulated with 5% HDE released significantly more of each of the cytokines measured (IL-6, IL-8, TNF-α, keratinocyte-derived chemokine/CXC chemokine ligand 1, and macrophage inflammatory protein-2/CXC chemokine ligand 2) than controls, and these effects were markedly diminished by protease inhibition. Inhibition of PARs also blunted the HDE-induced cytokine release from BECs. In addition, protease depletion inhibited HDE-induced BEC intracellular PKCα and PKCε activation. C57BL/6J mice administered 12.5% HDE intranasally, either once or daily for 3 wk, exhibited increased total cellular and neutrophil influx, bronchial alveolar fluid inflammatory cytokines, lung histopathology, and inflammatory scores compared with mice receiving protease-depleted HDE. These data suggest that proteases in dust from CAFOs are important mediators of lung inflammation, and these proteases and their receptors may provide novel targets for therapeutic intervention in CAFO dust-induced airways disease. PMID

  8. Proteases in agricultural dust induce lung inflammation through PAR-1 and PAR-2 activation

    PubMed Central

    Heires, Art J.; Nordgren, Tara M.; Souder, Chelsea P.; West, William; Liu, Xiang-de; Poole, Jill A.; Toews, Myron L.; Wyatt, Todd A.

    2015-01-01

    Workers exposed to aerosolized dust present in concentrated animal feeding operations (CAFOs) are susceptible to inflammatory lung diseases, such as chronic obstructive pulmonary disease. Extracts of dust collected from hog CAFOs [hog dust extract (HDE)] are potent stimulators of lung inflammatory responses in several model systems. The observation that HDE contains active proteases prompted the present study, which evaluated the role of CAFO dust proteases in lung inflammatory processes and tested whether protease-activated receptors (PARs) are involved in the signaling pathway for these events. We hypothesized that the damaging proinflammatory effect of HDE is due, in part, to the proteolytic activation of PARs, and inhibiting the proteases in HDE or disrupting PAR activation would attenuate HDE-mediated inflammatory indexes in bronchial epithelial cells (BECs), in mouse lung slices in vitro, and in a murine in vivo exposure model. Human BECs and mouse lung slice cultures stimulated with 5% HDE released significantly more of each of the cytokines measured (IL-6, IL-8, TNF-α, keratinocyte-derived chemokine/CXC chemokine ligand 1, and macrophage inflammatory protein-2/CXC chemokine ligand 2) than controls, and these effects were markedly diminished by protease inhibition. Inhibition of PARs also blunted the HDE-induced cytokine release from BECs. In addition, protease depletion inhibited HDE-induced BEC intracellular PKCα and PKCε activation. C57BL/6J mice administered 12.5% HDE intranasally, either once or daily for 3 wk, exhibited increased total cellular and neutrophil influx, bronchial alveolar fluid inflammatory cytokines, lung histopathology, and inflammatory scores compared with mice receiving protease-depleted HDE. These data suggest that proteases in dust from CAFOs are important mediators of lung inflammation, and these proteases and their receptors may provide novel targets for therapeutic intervention in CAFO dust-induced airways disease. PMID

  9. Optimization of Crystals of an Inhibitory Antibody of Urokinase Plasminogen Activator Receptor (uPAR) with Hydrogen Peroxide and Low Protein Concentration

    SciTech Connect

    Li, Yongdong; Shi, Xiaoli; Parry, Graham; Chen, Liqing; Callahan, Jennifer A.; Mazar, Andrew P.; Huang, Mingdong

    2010-07-19

    Optimization of protein crystal formation is often a necessary step leading to diffraction-quality crystals to enable collection of a full X-ray data set. Typical protein crystal optimization involves screening different components, e.g., pH, precipitants, and additives of the precipitant solution. Here we present an example using an inhibitory antibody of urokinase plasminogen activator receptor (uPAR) where such procedures did not yield diffracting crystals. In contrast, it was the treatment of the protein with hydrogen peroxide incubation and the protein concentration reduction that were found to be key factors in obtaining diffracting crystals. Final crystals diffracted to 1.75 {angstrom}, and belong to orthorhombic P212121 space group with unit cell parameters a = 37.162 {angstrom}, b = 84.474 {angstrom}, c = 134.030 {angstrom}, and contain one molecule of Fab fragment of anti-uro kinase receptor antibody in the asymmetric unit.

  10. Diffractive X-Ray Telescopes

    NASA Technical Reports Server (NTRS)

    Skinner, Gerald K.

    2010-01-01

    Diffractive X-ray telescopes, using zone plates, phase Fresnel lenses, or related optical elements have the potential to provide astronomers with true imaging capability with resolution many orders of magnitude better than available in any other waveband. Lenses that would be relatively easy to fabricate could have an angular resolution of the order of micro-arc-seconds or even better, that would allow, for example, imaging of the distorted spacetime in the immediate vicinity of the super-massive black holes in the center of active galaxies. What then is precluding their immediate adoption? Extremely long focal lengths, very limited bandwidth, and difficulty stabilizing the image are the main problems. The history, and status of the development of such lenses is reviewed here and the prospects for managing the challenges that they present are discussed.

  11. Encapsulation process for diffraction gratings.

    PubMed

    Ratzsch, Stephan; Kley, Ernst-Bernhard; Tünnermann, Andreas; Szeghalmi, Adriana

    2015-07-13

    Encapsulation of grating structures facilitates an improvement of the optical functionality and/or adds mechanical stability to the fragile structure. Here, we introduce novel encapsulation process of nanoscale patterns based on atomic layer deposition and micro structuring. The overall size of the encapsulated structured surface area is only restricted by the size of the available microstructuring and coating devices; thus, overcoming inherent limitations of existing bonding processes concerning cleanliness, roughness, and curvature of the components. Finally, the process is demonstrated for a transmission grating. The encapsulated grating has 97.5% transmission efficiency in the -1st diffraction order for TM-polarized light, and is being limited by the experimental grating parameters as confirmed by rigorous coupled wave analysis.

  12. Exclusive, Hard Diffraction in QCD

    NASA Astrophysics Data System (ADS)

    Freund, Andreas

    1999-03-01

    In the first chapter we give an introduction to hard diffractive scattering in QCD to introduce basic concepts and terminology. In the second chapter we make predictions for the evolution of skewed parton distributions in a proton in the LLA. We calculate the DGLAP-type evolution kernels in the LLA and solve the skewed GLAP evolution equations with a modified version of the CTEQ-package. In the third chapter, we discuss the algorithms used in the LO evolution program for skewed parton distributions in the DGLAP region, discuss the stability of the code and reproduce the LO diagonal evolution within less than 0.5% of the original CTEQ-code. In chapter 4, we show that factorization holds for the deeply virtual Compton scattering amplitude in QCD, up to power suppressed terms, to all orders in perturbation theory. In chapter 5, we demonstrate that perturbative QCD allows one to calculate the absolute cross section of diffractive, exclusive production of photons (DVCS) at large Q^2 at HERA, while the aligned jet model allows one to estimate the cross section for intermediate Q^2 ˜ 2 GeV^2. We find a significant DVCS counting rate for the current generation of experiments at HERA and a large azimuthal angle asymmetry for HERA kinematics. In the last chapter, we propose a new methodology of gaining shape fits to skewed parton distributions and, for the first time, to determine the ratio of the real to imaginary part of the DIS amplitude. We do this by using several recent fits to F_2(x,Q^2) to compute the asymmetry A for the combined DVCS and Bethe-Heitler cross section. In the appendix, we give an application of distributional methods as discussed abstractly in chapter 4.

  13. Variable focus crystal diffraction lens

    SciTech Connect

    Smither, R.K.

    1988-11-01

    A new method has been developed to control the shape of the surface of a diffracting crystal that will allow it to function as a variable focus crystal diffraction lens, for focusing photon beams from a synchrotron source. The new method uses thermal gradients in the crystal to control the shape of the surface of the crystal in two dimensions and allows one to generate both spherical and ellipsoidal surface shapes. In this work the thermal gradient was generated by core drilling two sets of cooling channels in a silicon crystal so that cooling or heating fluids could be circulated through the crystal at two different levels. The first set of channels is close to the surface of the crystal where the photon beam strikes it. The second set of channels is equal distant from the back surface. If a concave surface is desired, the fluid in the channels just below the surface exposed to the beam is cooler than the fluid circulating through the channels near the back surface. If a convex surface is desired, then the cooling fluid in the upper channels near the surface exposed to the incident photon beam, is warmer than the fluid in the lower channels. The focal length of the crystal lens is varied by varying the thermal gradient in the crystal. This approach can also be applied to the first crystal in a high power synchrotron beam line to eliminate the bowing and other thermal distortions of the crystal caused by the high heat load. 6 refs., 8 figs., 3 tabs.

  14. SPRY1 promotes the degradation of uPAR and inhibits uPAR-mediated cell adhesion and proliferation

    PubMed Central

    Liu, Xiufeng; Lan, Yan; Zhang, Di; Wang, Kai; Wang, Yao; Hua, Zi-Chun

    2014-01-01

    Urokinase plasminogen activator receptor (uPAR) is a GPI anchored cell surface protein that is closely associated with invasion, migration, and metastasis of cancer cells. Many functional extracellular proteins and transmembrane receptors interact with uPAR. However, few studies have examined the association of uPAR with cytoplasm proteins. We previously used yeast two-hybrid screening to isolate several novel uPAR-interacting cytoplasmic proteins, including Sprouty1 (SPRY1), an inhibitor of the (Ras-mitogen-activated protein kinase) MAPK pathway. In this study, we show that SPRY1 interacts with uPAR and directs it toward lysosomal-mediated degradation. Overexpression of SPRY1 decreased the cell surface and cytoplasmic uPAR protein level. Moreover, SPRY1 overexpression augmented uPAR-induced cell adhesion to vitronectin as well as proliferation of cancer cells. Our results also further support the critical role of SPRY1 contribution to tumor growth. In a subcutaneous tumor model, overexpression of SPRY1 in HCT116 or A549 xenograft in athymic nude mice led to great suppression of tumor growth. These results show that SPRY1 may affect tumor cell function through direct interaction with uPAR and promote its lysosomal degradation. PMID:25520860

  15. Megestrol acetate NCD oral suspension--Par Pharmaceutical: megestrol acetate nanocrystal dispersion oral suspension, PAR 100.2, PAR-100.2.

    PubMed

    2007-01-01

    Par Pharmaceutical has developed megestrol acetate (Megace ES) oral suspension for the treatment of anorexia, cachexia and a significant weight loss associated with AIDS. Par Pharmaceutical used Elan Corporation's NanoCrystal Dispersion (NCD) technology to develop an advanced, concentrated formulation of megestrol acetate with improved bioavailability, more rapid onset of action, more convenient dosing and a lower dosing regimen compared with the original marketed formulation of megestrol acetate oral suspension. Patients are administered a teaspoon (5mL) of the new NCD formulation once daily, compared with a daily 20mL dosage cup of the original formulation. The new megestrol acetate NCD formulation represents a line-extension of Par's megestrol acetate oral suspension (800mg/20mL, Megace O/S) that has been marketed for anorexia, cachexia and AIDS-related weight loss since July 2001. Par's megestrol acetate is the generic version of Bristol-Myers Squibb's Megace Oral Suspension. NanoCrystal Dispersion (NCD) is a trademark of Elan Corporation. Par Pharmaceutical will market megestol acetate NCD oral suspension under the Megace brand name. The company licensed the Megace name from Bristol-Myers Squib in August 2003. The US FDA approved megestrol acetate oral suspension (625 mg/mL) in July 2005 for the treatment of anorexia, cachexia or a significant, unexplained weight loss in patients with AIDS. The NDA for the product was accepted for review by the agency in September 2004, following its submission in June of that year.Par Pharmaceutical commenced the first of two phase III clinical trials of megestrol acetate oral suspension (PAR 100.2) in cancer-induced anorexia in the first quarter of 2006. However, this trial was discontinued in September 2006 because of slow patient enrolment. The company intends to discuss future development options in this indication with the FDA.New formulations or dosage forms of megestrol acetate concentrated suspension are also in

  16. Megestrol acetate NCD oral suspension -- Par Pharmaceutical: megestrol acetate nanocrystal dispersion oral suspension, PAR 100.2, PAR-100.2.

    PubMed

    2007-01-01

    Par Pharmaceutical has developed megestrol acetate (Megace ES) oral suspension for the treatment of anorexia, cachexia and a significant weight loss associated with AIDS. Par Pharmaceutical used Elan Corporation's NanoCrystal Dispersion (NCD) technology to develop an advanced, concentrated formulation of megestrol acetate with improved bioavailability, more rapid onset of action, more convenient dosing and a lower dosing regimen compared with the original marketed formulation of megestrol acetate oral suspension. Patients are administered a teaspoon (5mL) of the new NCD formulation once daily, compared with a daily 20mL dosage cup of the original formulation. The new megestrol acetate NCD formulation represents a line-extension of Par's megestrol acetate oral suspension (800mg/20mL, Megace O/S) that has been marketed for anorexia, cachexia and AIDS-related weight loss since July 2001. Par's megestrol acetate is the generic version of Bristol-Myers Squibb's Megace Oral Suspension. NanoCrystal Dispersion (NCD) is a trademark of Elan Corporation. Par Pharmaceutical will market megestol acetate NCD oral suspension under the Megace brand name. The company licensed the Megace name from Bristol-Myers Squib in August 2003. The US FDA approved megestrol acetate oral suspension (625 mg/mL) in July 2005 for the treatment of anorexia, cachexia or a significant, unexplained weight loss in patients with AIDS. The NDA for the product was accepted for review by the agency in September 2004, following its submission in June of that year.Par Pharmaceutical commenced the first of two phase III clinical trials of megestrol acetate oral suspension (PAR 100.2) in cancer-induced anorexia in the first quarter of 2006. However, this trial was discontinued in September 2006 because of slow patient enrolment. The company intends to discuss future development options in this indication with the FDA.New formulations or dosage forms of megestrol acetate concentrated suspension are also in

  17. Control of cleavage spindle orientation in Caenorhabditis elegans: The role of the genes par-2 and par-3

    SciTech Connect

    Cheng, N.N.; Kirby, C.M.; Kemphues, K.J.

    1995-02-01

    Polarized asymmetric divisions play important roles in the development of plants and animals. The first two embryonic cleavages of Caenorhabditis elegans provide an opportunity to study the mechanisms controlling polarized asymmetric divisions. The first cleavage is unequal, producing daughters with different sizes and fates. The daughter blastomeres divide with different orientations at the second cleavage; the anterior blastomere divides equally across the long axis of the egg, whereas the posterior blastomere divides unequally along the long axis. We report here the results of our analysis of the genes par-2 and par-3 with respect to their contribution to the polarity of these divisions. Strong loss-of-function mutations in both genes lead to an equal first cleavage and an altered second cleavage. Interestingly, the mutations exhibit striking gene-specific differences at the second cleavage. The par-2 mutations lead to transverse spindle orientations in both blastomeres, whereas par-3 mutations lead to longitudinal spindle orientations in both blastomeres. The spindle orientation defects correlate with defects in centrosome movements during both the first and the second cell cycle. Temperature shift experiments with par-2 (it5ts) indicate that the par-2(+) activity is not required after the two-cell stage. Analysis of double mutants shows that par-3 is epistatic to par-2. We propose a model wherein par-2(+) and par-3(+) act in concert during the first cell cycle to affect asymmetric modification of the cytoskeleton. This polar modification leads to different behaviors of centrosomes in the anterior and posterior and leads ultimately to blastomere-specific spindle orientations at the second cleavage. 44 refs., 5 figs., 5 tabs.

  18. Scleral Buckling for Rhegmatogenous Retinal Detachment Associated with Pars Planitis

    PubMed Central

    Ahn, Jae Kyoun

    2016-01-01

    Purpose. To evaluate the surgical outcome of scleral buckling (SB) in rhegmatogenous retinal detachment (RRD) patients associated with pars planitis. Methods. Retrospective review of RRD patients (32 eyes of pars planitis RRD and 180 eyes of primary RRD) who underwent SB. We compared primary and final anatomical success rates and visual outcomes between two groups. Results. Primary and final anatomical success were achieved in 25 (78.1%) and 31 (96.8%) eyes in the pars planitis RRD group and in 167 eyes (92.7%) and 176 eyes (97.7%) in primary RRD group, respectively. Both groups showed significant visual improvement (p < 0.001) and there were no significant differences in final visual acuity. Pars planitis RRD group was associated with higher rate of postoperative proliferative vitreoretinopathy (PVR) development (12.5% versus 2.8%, p = 0.031). Pars planitis and high myopia were significant preoperative risk factors and pseudophakia was borderline risk for primary anatomical failure after adjusting for various clinical factors. Conclusions. Pars planitis associated RRD showed inferior primary anatomical outcome after SB due to postoperative PVR development. However, final anatomical and visual outcomes were favorable. RRD cases associated with pars planitis, high myopia, and pseudophakia might benefit from different surgical approaches, such as combined vitrectomy and SB. PMID:27688907

  19. Scleral Buckling for Rhegmatogenous Retinal Detachment Associated with Pars Planitis.

    PubMed

    Kim, Yong-Kyu; Yoon, Wontae; Ahn, Jae Kyoun; Park, Sung Pyo

    2016-01-01

    Purpose. To evaluate the surgical outcome of scleral buckling (SB) in rhegmatogenous retinal detachment (RRD) patients associated with pars planitis. Methods. Retrospective review of RRD patients (32 eyes of pars planitis RRD and 180 eyes of primary RRD) who underwent SB. We compared primary and final anatomical success rates and visual outcomes between two groups. Results. Primary and final anatomical success were achieved in 25 (78.1%) and 31 (96.8%) eyes in the pars planitis RRD group and in 167 eyes (92.7%) and 176 eyes (97.7%) in primary RRD group, respectively. Both groups showed significant visual improvement (p < 0.001) and there were no significant differences in final visual acuity. Pars planitis RRD group was associated with higher rate of postoperative proliferative vitreoretinopathy (PVR) development (12.5% versus 2.8%, p = 0.031). Pars planitis and high myopia were significant preoperative risk factors and pseudophakia was borderline risk for primary anatomical failure after adjusting for various clinical factors. Conclusions. Pars planitis associated RRD showed inferior primary anatomical outcome after SB due to postoperative PVR development. However, final anatomical and visual outcomes were favorable. RRD cases associated with pars planitis, high myopia, and pseudophakia might benefit from different surgical approaches, such as combined vitrectomy and SB. PMID:27688907

  20. Scleral Buckling for Rhegmatogenous Retinal Detachment Associated with Pars Planitis

    PubMed Central

    Ahn, Jae Kyoun

    2016-01-01

    Purpose. To evaluate the surgical outcome of scleral buckling (SB) in rhegmatogenous retinal detachment (RRD) patients associated with pars planitis. Methods. Retrospective review of RRD patients (32 eyes of pars planitis RRD and 180 eyes of primary RRD) who underwent SB. We compared primary and final anatomical success rates and visual outcomes between two groups. Results. Primary and final anatomical success were achieved in 25 (78.1%) and 31 (96.8%) eyes in the pars planitis RRD group and in 167 eyes (92.7%) and 176 eyes (97.7%) in primary RRD group, respectively. Both groups showed significant visual improvement (p < 0.001) and there were no significant differences in final visual acuity. Pars planitis RRD group was associated with higher rate of postoperative proliferative vitreoretinopathy (PVR) development (12.5% versus 2.8%, p = 0.031). Pars planitis and high myopia were significant preoperative risk factors and pseudophakia was borderline risk for primary anatomical failure after adjusting for various clinical factors. Conclusions. Pars planitis associated RRD showed inferior primary anatomical outcome after SB due to postoperative PVR development. However, final anatomical and visual outcomes were favorable. RRD cases associated with pars planitis, high myopia, and pseudophakia might benefit from different surgical approaches, such as combined vitrectomy and SB.

  1. Croissance Par Epitaxie EN Phase Vapeur aux Organo - et Caracterisation des Heterostructures Contraintes a Base de Phosphur de Indium

    NASA Astrophysics Data System (ADS)

    Tran, Chuong Anh

    Trois systemes heteroepitaxiaux a base de InP:InP/Si, InAs/InP et InAsP/InP ont ete fabriques par epitaxie en phase vapeur aux organo-metalliques (EPVOM)conventionelle. En plus l'epitaxie par couches atomiques (ECA) a ete utilisee pour fabriquer des puits quantiques ultra-minces et des superreseaux a courte periode InAs/InP. L'epitaxie de InP sur le silicium pose des problemes lies a un desaccord de maille de 8%. Les resultats indiquent une relaxation totale de la couche de InP a la temperature de croissance. La contrainte residuelle observee par diffraction de rayons X a haute resolution (DRXHR) et photoluminescence s'explique par une difference dans les coefficients de dilatation thermique de InP et due Si. L'incorporation des impuretes ainsi que la diffusion d'atomes de Si du substrat dans la couche epitaxiale de InP dependent fortement des parametres de croissance. Les resultats montrents que le reseau de dislocations dans les couches de InP deposees sur un substrat de Si mesoriente est suffisamment asymetrique pour creer des constraintes locales. Celles-ci peuvent etre analysees par diffraction de rayons X. Par contre le systeme heteroepitaxial InAs/InP, dont le desaccord de maille est 3.2% peut etre realise sans dislocation a condition que l'epaisseur de toute heterostructure soit gardee inferieure a l'epaisseur critique. Des puits quantiques InAsP/InP a la temperature ambiante montre clairement l'inter et technologique du systeme InAs_ {x}P_{1-x}/InP pour la realisation de dispositifs tels que les modulateurs optiques. L'ECA a ete utilisee pour realiser des puits quantiques simples et des superreseaux a courte periode InAs/InP. Nous avons demontre que cette technique permet d'obtenir des interfaces tres abruptes et des epaisseurs bien definies, et de faire des heterostructures que peuvent combiner une large gamme de semiconducteurs de composition et desaccords de maille varies. Finalement nous avons fait une etude approfondie des modes vibratoires dans les

  2. Applications of diffraction theory to aeroacoustics

    NASA Technical Reports Server (NTRS)

    Lansing, D. L.; Chen-Huei, L.; Norum, T. D.

    1979-01-01

    A review is given of the fundamentals of diffraction theory and the application of the theory to several problems of aircraft noise generation, propagation, and measurement. The general acoustic diffraction problem is defined and the governing equations set down. Diffraction phenomena are illustrated using the classical problem of the diffraction of a plane wave by a half-plane. Infinite series and geometric acoustic methods for solving diffraction problems are described. Four applications of diffraction theory are discussed: the selection of an appropriate shape for a microphone, the use of aircraft wings to shield the community from engine noise, the reflection of engine noise from an aircraft fuselage and the radiation of trailing edge noise.

  3. Anomalous Diffraction in Crystallographic Phase Evaluation

    PubMed Central

    Hendrickson, Wayne A.

    2014-01-01

    X-ray diffraction patterns from crystals of biological macromolecules contain sufficient information to define atomic structures, but atomic positions are inextricable without having electron-density images. Diffraction measurements provide amplitudes, but the computation of electron density also requires phases for the diffracted waves. The resonance phenomenon known as anomalous scattering offers a powerful solution to this phase problem. Exploiting scattering resonances from diverse elements, the methods of multiwavelength anomalous diffraction (MAD) and single-wavelength anomalous diffraction (SAD) now predominate for de novo determinations of atomic-level biological structures. This review describes the physical underpinnings of anomalous diffraction methods, the evolution of these methods to their current maturity, the elements, procedures and instrumentation used for effective implementation, and the realm of applications. PMID:24726017

  4. Hard diffraction with dynamic gap survival

    NASA Astrophysics Data System (ADS)

    Rasmussen, Christine O.; Sjöstrand, Torbjörn

    2016-02-01

    We present a new framework for the modelling of hard diffraction in pp and poverline{p} collisions. It starts from the the approach pioneered by Ingelman and Schlein, wherein the single diffractive cross section is factorized into a Pomeron flux and a Pomeron PDF. To this it adds a dynamically calculated rapidity gap survival factor, derived from the modelling of multiparton interactions. This factor is not relevant for diffraction in ep collisions, giving non-universality between HERA and Tevatron diffractive event rates. The model has been implemented in P ythia 8 and provides a complete description of the hadronic state associated with any hard single diffractive process. Comparisons with poverline{p} and pp data reveal improvement in the description of single diffractive events.

  5. Multi-scale photoacoustic remote sensing (PARS) (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Haji Reza, Parsin; Bell, Kevan; Shi, W.; Zemp, Roger J.

    2016-03-01

    We introduce a novel multi-scale photoacoustic remote sensing (PARS) imaging system. Our system can provide optical resolution details for superficial structures as well as acoustic resolution for deep-tissue imaging down to 5 cm, in a non-contact setting. PARS system does not require any contact with the sample or ultrasound coupling medium. The optical resolution PARS (OR-OARS) system uses optically focused pulsed excitation with optical detection of photoacoustic signatures using a long-coherence interrogation beam co-focused and co-scanned with the excitation spot. In the OR-PARS initial pressures are sampled right at their subsurface origin where acoustic pressures are largest. The Acoustic resolution PARS (AR-PARS) picks up the surface oscillation of the tissue caused by generated photoacoustic signal using a modified version of Michelson interferometry. By taking advantage of 4-meters polarization maintaining single-mode fiber and a green fiber laser we have generated a multi-wavelength source using stimulated Raman scattering. Remote functional imaging using this multi-wavelength excitation source and PARS detection mechanism has been demonstrated. The oxygen saturation estimations are shown for both phantom and in vivo studies. Images of blood vessel structures for an In vivo chicken embryo model is demonstrated. The Phantom studies indicates ~3µm and ~300µm lateral resolution for OR-PARS and AR-PARS respectively. To the best of our knowledge this is the first dual modality non-contact optical and acoustic resolution system used for in vivo imaging.

  6. Fraunhofer diffraction of light by human enamel.

    PubMed

    O'Brien, W J

    1988-02-01

    Fraunhofer diffraction patterns of human enamel samples were photographed with a helium-neon laser beam (lambda = 633 nm). The first-order diffraction angle was in reasonable agreement with a prediction based upon enamel prisms acting as a two-dimensional grating. These results support the hypothesis that enamel diffracts light because of the periodic structure of enamel prisms with interprismatic spaces, which act as slits.

  7. Twenty years of diffraction at the Tevatron

    SciTech Connect

    Goulianos, K.; /Rockefeller U.

    2005-10-01

    Results on diffractive particle interactions from the Fermilab Tevatron {bar p}p collider are placed in perspective through a QCD inspired phenomenological approach, which exploits scaling and factorization properties observed in data. The results discussed are those obtained by the CDF Collaboration from a comprehensive set of single, double, and multigap soft and hard diffraction processes studied during the twenty year period since 1985, when the CDF diffractive program was proposed and the first Blois Workshop was held.

  8. Diffraction gratings used as identifying markers

    DOEpatents

    Deason, V.A.; Ward, M.B.

    1991-03-26

    A finely detailed diffraction grating is applied to an object as an identifier or tag which is unambiguous, difficult to duplicate, or remove and transfer to another item, and can be read and compared with prior readings with relative ease. The exact pattern of the diffraction grating is mapped by diffraction moire techniques and recorded for comparison with future readings of the same grating. 7 figures.

  9. Aircraft noise propagation. [sound diffraction by wings

    NASA Technical Reports Server (NTRS)

    Hadden, W. J.; Pierce, A. D.

    1978-01-01

    Sound diffraction experiments conducted at NASA Langley Research Center to study the acoustical implications of the engine over wing configuration (noise-shielding by wing) and to provide a data base for assessing various theoretical approaches to the problem of aircraft noise reduction are described. Topics explored include the theory of sound diffraction around screens and wedges; the scattering of spherical waves by rectangular patches; plane wave diffraction by a wedge with finite impedence; and the effects of ambient flow and distribution sources.

  10. Coherent diffractive imaging and partial coherence

    NASA Astrophysics Data System (ADS)

    Williams, Garth J.; Quiney, Harry M.; Peele, Andrew G.; Nugent, Keith A.

    2007-03-01

    We formulate coherent diffractive imaging in the framework of partially spatially coherent diffraction. We find that the reconstruction can be critically dependent on the degree of coherence in the illuminating field and that even a small departure from full coherence may invalidate the conventional assumption that a mapping exists between an exit surface wave of finite support and a far field diffraction pattern. We demonstrate that the introduction of sufficient phase curvature in the illumination can overcome the adverse effects of partial coherence.

  11. A femtosecond electron diffraction system

    NASA Astrophysics Data System (ADS)

    Zhao, Baosheng; Zhang, Jie; Tian, Jinshou; Wang, Junfeng; Wu, Jianjun; Liu, Yunquan; Liu, Hulin

    2007-01-01

    The femtosecond electron diffraction (FED) is a unique method for the study of the changes of complex molecular structures, and has been specifically applied in the investigations of transient-optics, opto-physics, crystallography, and other fields. The FED system designed by the present group, consists of a 35nm Ag photocathode evaporated on an ultraviolet glass, an anode with a 0.1mm aperture, two pairs of deflection plate for the deflection of electron beams in X and Y directions, and the Y deflection plate can be used as a scanning plate while measuring the pulse width of electron beams, the double MCPs detector for the enhancing and detecting of electron image. The magnetic lens was used for the focusing of the electron beams, and the focal length is 125mm. The distance between the object(the photocathode) and the image(the sample) is 503mm, and the size of electron beams is smaller than 17microns after focusing, the convergence angle is of -0.075~0.075°, and the temporal resolution is better than 350fs.

  12. Convex Diffraction Grating Imaging Spectrometer

    NASA Technical Reports Server (NTRS)

    Chrisp, Michael P. (Inventor)

    1999-01-01

    A 1:1 Offner mirror system for imaging off-axis objects is modified by replacing a concave spherical primary mirror that is concentric with a convex secondary mirror with two concave spherical mirrors M1 and M2 of the same or different radii positioned with their respective distances d1 and d2 from a concentric convex spherical diffraction grating having its grooves parallel to the entrance slit of the spectrometer which replaces the convex secondary mirror. By adjusting their distances d1 and d2 and their respective angles of reflection alpha and beta, defined as the respective angles between their incident and reflected rays, all aberrations are corrected without the need to increase the spectrometer size for a given entrance slit size to reduce astigmatism, thus allowing the imaging spectrometer volume to be less for a given application than would be possible with conventional imaging spectrometers and still give excellent spatial and spectral imaging of the slit image spectra over the focal plane.

  13. What Phase Matters for Diffraction?

    NASA Astrophysics Data System (ADS)

    Jones, Eric; Bach, Roger; Batelaan, Herman

    2014-05-01

    Young's double-slit experiment for matter is often compared to that of optics. In rudimentary explanations of the locations of the diffraction maxima and minima far from the slits, paths are sometimes superimposed over waves drawn from the two slits to the detection screen, leading to a phase difference of Δϕ = 2 πΔL /λdB between paths. Despite the intuitive connection of the two kinds of wave phenomena, this approach can lead to a misunderstanding of the theory for matter waves. The Feynman path-integral formalism justifies the use of paths to determine the phase difference; however, the phase accumulated along single free-particle paths according to the formalism is not ϕ = 2 πL /λdB , even though the expression for the phase difference is correct. The resulting factor of 2 difference in the single path phase from the intuitive value arises from the particular treatment of time-dependence in interpreting the problem. The nature of this misunderstanding will be discussed, and a possible resolution proposed based on the quantum mechanical principle of indistinguishability: the time duration of all interfering paths must be equal. We gratefully acknowledge support from the NSF.

  14. Large aperture diffractive space telescope

    DOEpatents

    Hyde, Roderick A.

    2001-01-01

    A large (10's of meters) aperture space telescope including two separate spacecraft--an optical primary objective lens functioning as a magnifying glass and an optical secondary functioning as an eyepiece. The spacecraft are spaced up to several kilometers apart with the eyepiece directly behind the magnifying glass "aiming" at an intended target with their relative orientation determining the optical axis of the telescope and hence the targets being observed. The objective lens includes a very large-aperture, very-thin-membrane, diffractive lens, e.g., a Fresnel lens, which intercepts incoming light over its full aperture and focuses it towards the eyepiece. The eyepiece has a much smaller, meter-scale aperture and is designed to move along the focal surface of the objective lens, gathering up the incoming light and converting it to high quality images. The positions of the two space craft are controlled both to maintain a good optical focus and to point at desired targets which may be either earth bound or celestial.

  15. Limnological database for Par Pond: 1959 to 1980

    SciTech Connect

    Tilly, L.J.

    1981-03-01

    A limnological database for Par Pond, a cooling reservoir for hot reactor effluent water at the Savannah River Plant, is described. The data are derived from a combination of research and monitoring efforts on Par Pond since 1959. The approximately 24,000-byte database provides water quality, primary productivity, and flow data from a number of different stations, depths, and times during the 22-year history of the Par Pond impoundment. The data have been organized to permit an interpretation of the effects of twenty years of cooling system operations on the structure and function of an aquatic ecosystem.

  16. Predicted PAR1 inhibitors from multiple computational methods

    NASA Astrophysics Data System (ADS)

    Wang, Ying; Liu, Jinfeng; Zhu, Tong; Zhang, Lujia; He, Xiao; Zhang, John Z. H.

    2016-08-01

    Multiple computational approaches are employed in order to find potentially strong binders of PAR1 from the two molecular databases: the Specs database containing more than 200,000 commercially available molecules and the traditional Chinese medicine (TCM) database. By combining the use of popular docking scoring functions together with detailed molecular dynamics simulation and protein-ligand free energy calculations, a total of fourteen molecules are found to be potentially strong binders of PAR1. The atomic details in protein-ligand interactions of these molecules with PAR1 are analyzed to help understand the binding mechanism which should be very useful in design of new drugs.

  17. An electromagnetic PIC code on the MasPar

    SciTech Connect

    MacNeice, P.

    1993-12-31

    A 3D electromagnetic particle-in-cell code has been rewritten to run on the MasPar. The original code; known as TRISTAN which was written by Oscar Buneman was rewritten in MPL and its data structure altered to suit the MasPar architecture and exploit the fully local property of the algorithm. We discuss the significant issues associated with porting the code and present a comparative analysis of the code run times on the MasPar and on the CRAY YMP and C90. Results of a simulation of the interaction of the solar wind with the earth`s magnetosphere are shown.

  18. Diffractively corrected counter-rotating Risley prisms.

    PubMed

    Nie, Xin; Yang, Hongfang; Xue, Changxi

    2015-12-10

    Using the vector refraction equation and the vector diffraction equation, we obtain the expressions of the direction cosines of the refractive rays for the two wedge prisms, and the direction cosines of the diffractive rays for two wedge grisms, in which diffractive gratings were etched into the prism faces to correct the chromatic aberrations. A mathematical model between the two vector equations is proposed to compare the difference angle chromatic aberrations when the Risley prisms/grisms are rotating at different angles. We conclude that the use of diffractively corrected prisms offers a new method to correct chromatic aberrations in Risley prisms. PMID:26836873

  19. Broadband beam shaping with harmonic diffractive optics.

    PubMed

    Singh, Manisha; Tervo, Jani; Turunen, Jari

    2014-09-22

    We consider spatial shaping of broadband (either stationary or pulsed) spatially coherent light, comparing refractive, standard diffractive, and harmonic diffractive (modulo 2πM) elements. Considering frequency-integrated target profiles we show that, contrary to common belief, standard diffractive (M = 1) elements work reasonably well for, e.g., Gaussian femtosecond pulses and spatially coherent amplified-spontaneous-emission sources such as superluminescent diodes. It is also shown that harmonic elements with M ≥ 5 behave in essentially the same way as refractive elements and clearly outperform standard diffractive elements for highly broadband light.

  20. Diffraction by m-bonacci gratings

    NASA Astrophysics Data System (ADS)

    Monsoriu, Juan A.; Giménez, Marcos H.; Furlan, Walter D.; Barreiro, Juan C.; Saavedra, Genaro

    2015-11-01

    We present a simple diffraction experiment with m-bonacci gratings as a new interesting generalization of the Fibonacci ones. Diffraction by these non-conventional structures is proposed as a motivational strategy to introduce students to basic research activities. The Fraunhofer diffraction patterns are obtained with the standard equipment present in most undergraduate physics labs and are compared with those obtained with regular periodic gratings. We show that m-bonacci gratings produce discrete Fraunhofer patterns characterized by a set of diffraction peaks which positions are related to the concept of a generalized golden mean. A very good agreement is obtained between experimental and numerical results and the students’ feedback is discussed.

  1. Results on hard diffraction from CDF

    SciTech Connect

    Goulianos, K.

    1997-05-01

    We present results from studies of hard diffractive processes in {anti p}p collisions at {radical}s=1.8 TeV at the Tevatron using the CDF detector. Diffractive events are identified by the characteristic signature of a rapidity gap and/or by detecting a recoil antiproton with high forward momentum. Reactions studied include the diffractive production of W-bosons and of two-jet (dijet) events, diffractive heavy quark production, and dijet production by double-pomeron exchange.

  2. Diffractive Imaging Using Partially Coherent X Rays

    NASA Astrophysics Data System (ADS)

    Whitehead, L. W.; Williams, G. J.; Quiney, H. M.; Vine, D. J.; Dilanian, R. A.; Flewett, S.; Nugent, K. A.; Peele, A. G.; Balaur, E.; McNulty, I.

    2009-12-01

    The measured spatial coherence characteristics of the illumination used in a diffractive imaging experiment are incorporated in an algorithm that reconstructs the complex transmission function of an object from experimental x-ray diffraction data using 1.4 keV x rays. Conventional coherent diffractive imaging, which assumes full spatial coherence, is a limiting case of our approach. Even in cases in which the deviation from full spatial coherence is small, we demonstrate a significant improvement in the quality of wave field reconstructions. Our formulation is applicable to x-ray and electron diffraction imaging techniques provided that the spatial coherence properties of the illumination are known or can be measured.

  3. Catastrophe optics of sharp-edge diffraction.

    PubMed

    Borghi, Riccardo

    2016-07-01

    A classical problem of diffraction theory, namely plane wave diffraction by sharp-edge apertures, is here reformulated from the viewpoint of the fairly new subject of catastrophe optics. On using purely geometrical arguments, properly embedded into a wave optics context, uniform analytical estimates of the diffracted wavefield at points close to fold caustics are obtained, within paraxial approximation, in terms of the Airy function and its first derivative. Diffraction from parabolic apertures is proposed to test reliability and accuracy of our theoretical predictions.

  4. Electron Diffraction Using Transmission Electron Microscopy

    PubMed Central

    Bendersky, Leonid A.; Gayle, Frank W.

    2001-01-01

    Electron diffraction via the transmission electron microscope is a powerful method for characterizing the structure of materials, including perfect crystals and defect structures. The advantages of electron diffraction over other methods, e.g., x-ray or neutron, arise from the extremely short wavelength (≈2 pm), the strong atomic scattering, and the ability to examine tiny volumes of matter (≈10 nm3). The NIST Materials Science and Engineering Laboratory has a history of discovery and characterization of new structures through electron diffraction, alone or in combination with other diffraction methods. This paper provides a survey of some of this work enabled through electron microscopy. PMID:27500060

  5. Broadband diffractive lens or imaging element

    DOEpatents

    Ceglio, Natale M.; Hawryluk, Andrew M.; London, Richard A.; Seppala, Lynn G.

    1991-01-01

    A broadband diffractive lens or imaging element produces a sharp focus and/or a high resolution image with broad bandwidth illuminating radiation. The diffractive lens is sectored or segmented into regions, each of which focuses or images a distinct narrowband of radiation but all of which have a common focal length. Alternatively, a serial stack of minus filters, each with a diffraction pattern which focuses or images a distinct narrowband of radiation but all of which have a common focal length, is used. The two approaches can be combined. Multifocal broadband diffractive elements can also be formed.

  6. Broadband diffractive lens or imaging element

    DOEpatents

    Ceglio, Natale M.; Hawryluk, Andrew M.; London, Richard A.; Seppala, Lynn G.

    1993-01-01

    A broadband diffractive lens or imaging element produces a sharp focus and/or a high resolution image with broad bandwidth illuminating radiation. The diffractive lens is sectored or segmented into regions, each of which focuses or images a distinct narrowband of radiation but all of which have a common focal length. Alternatively, a serial stack of minus filters, each with a diffraction pattern which focuses or images a distinct narrowband of radiation but all of which have a common focal length, is used. The two approaches can be combined. Multifocal broadband diffractive elements can also be formed. Thin film embodiments are described.

  7. Diffractively corrected counter-rotating Risley prisms.

    PubMed

    Nie, Xin; Yang, Hongfang; Xue, Changxi

    2015-12-10

    Using the vector refraction equation and the vector diffraction equation, we obtain the expressions of the direction cosines of the refractive rays for the two wedge prisms, and the direction cosines of the diffractive rays for two wedge grisms, in which diffractive gratings were etched into the prism faces to correct the chromatic aberrations. A mathematical model between the two vector equations is proposed to compare the difference angle chromatic aberrations when the Risley prisms/grisms are rotating at different angles. We conclude that the use of diffractively corrected prisms offers a new method to correct chromatic aberrations in Risley prisms.

  8. Broadband diffractive lens or imaging element

    DOEpatents

    Ceglio, N.M.; Hawryluk, A.M.; London, R.A.; Seppala, L.G.

    1993-10-26

    A broadband diffractive lens or imaging element produces a sharp focus and/or a high resolution image with broad bandwidth illuminating radiation. The diffractive lens is sectored or segmented into regions, each of which focuses or images a distinct narrowband of radiation but all of which have a common focal length. Alternatively, a serial stack of minus filters, each with a diffraction pattern which focuses or images a distinct narrowband of radiation but all of which have a common focal length, is used. The two approaches can be combined. Multifocal broadband diffractive elements can also be formed. Thin film embodiments are described. 21 figures.

  9. Protease-Activated Receptor (PAR)2, but Not PAR1, Is Involved in Collateral Formation and Anti-Inflammatory Monocyte Polarization in a Mouse Hind Limb Ischemia Model

    PubMed Central

    Nossent, Anne Yael; van Oeveren-Rietdijk, Annemarie M.; de Vries, Margreet R.; Spek, C. Arnold; van Zonneveld, Anton Jan; Reitsma, Pieter H.; Hamming, Jaap F.; de Boer, Hetty C.; Versteeg, Henri H.; Quax, Paul H. A.

    2013-01-01

    Aims In collateral development (i.e. arteriogenesis), mononuclear cells are important and exist as a heterogeneous population consisting of pro-inflammatory and anti-inflammatory/repair-associated cells. Protease-activated receptor (PAR)1 and PAR2 are G-protein-coupled receptors that are both expressed by mononuclear cells and are involved in pro-inflammatory reactions, while PAR2 also plays a role in repair-associated responses. Here, we investigated the physiological role of PAR1 and PAR2 in arteriogenesis in a murine hind limb ischemia model. Methods and Results PAR1-deficient (PAR1-/-), PAR2-deficient (PAR2-/-) and wild-type (WT) mice underwent femoral artery ligation. Laser Doppler measurements revealed reduced post-ischemic blood flow recovery in PAR2-/- hind limbs when compared to WT, while PAR1-/- mice were not affected. Upon ischemia, reduced numbers of smooth muscle actin (SMA)-positive collaterals and CD31-positive capillaries were found in PAR2-/- mice when compared to WT mice, whereas these parameters in PAR1-/- mice did not differ from WT mice. The pool of circulating repair-associated (Ly6C-low) monocytes and the number of repair-associated (CD206-positive) macrophages surrounding collaterals in the hind limbs were increased in WT and PAR1-/- mice, but unaffected in PAR2-/- mice. The number of repair-associated macrophages in PAR2-/- hind limbs correlated with CD11b- and CD115-expression on the circulating monocytes in these animals, suggesting that monocyte extravasation and M-CSF-dependent differentiation into repair-associated cells are hampered. Conclusion PAR2, but not PAR1, is involved in arteriogenesis and promotes the repair-associated response in ischemic tissues. Therefore, PAR2 potentially forms a new pro-arteriogenic target in coronary artery disease (CAD) patients. PMID:23637930

  10. Exclusive, hard diffraction in QCD

    NASA Astrophysics Data System (ADS)

    Freund, Andreas

    In the first chapter we give an introduction to hard diffractive scattering in QCD to introduce basic concepts and terminology, thus setting the stage for the following chapters. In the second chapter we make predictions for nondiagonal parton distributions in a proton in the LLA. We calculate the DGLAP-type evolution kernels in the LLA, solve the nondiagonal GLAP evolution equations with a modified version of the CTEQ-package and comment on the range of applicability of the LLA in the asymmetric regime. We show that the nondiagonal gluon distribution g(x1,x2,t,μ2) can be well approximated at small x by the conventional gluon density xG(x,μ2). In the third chapter, we discuss the algorithms used in the LO evolution program for nondiagonal parton distributions in the DGLAP region and discuss the stability of the code. Furthermore, we demonstrate that we can reproduce the case of the LO diagonal evolution within less than 0.5% of the original code as developed by the CTEQ-collaboration. In chapter 4, we show that factorization holds for the deeply virtual Compton scattering amplitude in QCD, up to power suppressed terms, to all orders in perturbation theory. Furthermore, we show that the virtuality of the produced photon does not influence the general theorem. In chapter 5, we demonstrate that perturbative QCD allows one to calculate the absolute cross section of diffractive exclusive production of photons at large Q2 at HERA, while the aligned jet model allows one to estimate the cross section for intermediate Q2~2GeV2. Furthermore, we find that the imaginary part of the amplitude for the production of real photons is larger than the imaginary part of the corresponding DIS amplitude, leading to predictions of a significant counting rate for the current generation of experiments at HERA. We also find a large azimuthal angle asymmetry in ep scattering for HERA kinematics which allows one to directly measure the real part of the DVCS amplitude and hence the

  11. Calculation of the diffraction efficiency on concave gratings based on Fresnel-Kirchhoff's diffraction formula.

    PubMed

    Huang, Yuanshen; Li, Ting; Xu, Banglian; Hong, Ruijin; Tao, Chunxian; Ling, Jinzhong; Li, Baicheng; Zhang, Dawei; Ni, Zhengji; Zhuang, Songlin

    2013-02-10

    Fraunhofer diffraction formula cannot be applied to calculate the diffraction wave energy distribution of concave gratings like plane gratings because their grooves are distributed on a concave spherical surface. In this paper, a method based on the Kirchhoff diffraction theory is proposed to calculate the diffraction efficiency on concave gratings by considering the curvature of the whole concave spherical surface. According to this approach, each groove surface is divided into several limited small planes, on which the Kirchhoff diffraction field distribution is calculated, and then the diffraction field of whole concave grating can be obtained by superimposition. Formulas to calculate the diffraction efficiency of Rowland-type and flat-field concave gratings are deduced from practical applications. Experimental results showed strong agreement with theoretical computations. With the proposed method, light energy can be optimized to the expected diffraction wave range while implementing aberration-corrected design of concave gratings, particularly for the concave blazed gratings.

  12. Characterization of the diffraction properties of quantum-dot-array diffraction grating

    SciTech Connect

    Wang Chuanke; Kuang Longyu; Wang Zhebin; Liu Shenye; Ding Yongkun; Cao Leifeng; Foerster, Eckhart; Wang Deqiang; Xie Changqing; Ye Tianchun

    2007-05-15

    A new dispersive element named as quantum-dot-array diffraction grating [L. F. Cao, China patent No. 200410081499 (August 10, 2004)] for visible light has been developed and characterized experimentally. A large number of quantum dots distributed on a substrate as sinusoidal function can be used to diffract x rays without higher-order diffraction. The experimental patterns show that the higher-order diffractions which inevitably exist in the spectrum recorded using traditional diffraction gratings can be eliminated effectively by this newly designed element. It indicates that quantum-dot-array diffraction grating could be an attractive alternative of presently used diffraction grating in soft x-ray spectroscopy application to get rid of the higher-order diffraction distortions.

  13. White-Light Diffraction with a CD

    ERIC Educational Resources Information Center

    Ivanov, Dragia Trifonov; Nikolaev, Stefan

    2010-01-01

    Various wave optics experiments can be carried out using an ordinary compact disc. The CD is suitable for use as a diffraction grating. For instance, a standard CD (700 MB) has 625 lines/mm. In this article, the authors describe two white-light diffraction demonstrations for a large audience, realizable using a CD (as reflection or transmission…

  14. RENORM predictions of diffraction at LHC confirmed

    SciTech Connect

    Goulianos, Konstantin

    2015-04-10

    The RENORM model predictions of diffractive, total, and total-inelastic cross sections at the LHC are confirmed by recent measurements. The predictions of several other available models are discussed, highlighting their differences from RENORM, mainly arising from the way rapidity gap formation, low- and high-mass diffraction, unitarization, and hadronization are implemented.

  15. Electron Diffraction Experiments using Laser Plasma Electrons

    SciTech Connect

    Fill, E E; Trushin, S; Tommasini, R; Bruch, R

    2005-09-07

    We demonstrate that electrons emitted from a laser plasma can be used to generate diffraction patterns in reflection and transmission. The electrons are emitted in the direction of laser polarization with energies up to 100 keV. The broad electron energy spectrum makes possible the generation of a ''streaked'' diffraction pattern which allows recording fast processes in a single run.

  16. Diffraction experiments with infrared remote controls

    NASA Astrophysics Data System (ADS)

    Kuhn, Jochen; Vogt, Patrik

    2012-02-01

    In this paper we describe an experiment in which radiation emitted by an infrared remote control is passed through a diffraction grating. An image of the diffraction pattern is captured using a cell phone camera and then used to determine the wavelength of the radiation.

  17. An Improved Diffraction Grating Spectroscope Experiment.

    ERIC Educational Resources Information Center

    Scherzer, Robert

    1995-01-01

    Discusses problems associated with standard diffraction grating experiments involving a diffraction grating, a straight meter stick, and a slit. Describes the use of a new spectroscope to overcome these problems using a curved scale to simplify calculations and help students obtain results from simple and straightforward measurements, thus giving…

  18. CMS results on exclusive and diffractive production

    SciTech Connect

    Alves, Gilvan A.

    2015-04-10

    We present recent CMS measurements of diffractive and exclusive processes, using data collected at 7 TeV at the LHC. Measurements of soft single- and double-diffractive cross sections are presented, as well as measurements of photon-induced processes including studies of exclusive WW production via photon-photon exchange.

  19. Inquiry with Laser Printer Diffraction Gratings

    ERIC Educational Resources Information Center

    Van Hook, Stephen J.

    2007-01-01

    The pages of "The Physics Teacher" have featured several clever designs for homemade diffraction gratings using a variety of materials--cloth, lithographic film, wire, compact discs, parts of aerosol spray cans, and pseudoliquids and pseudosolids. A different and inexpensive method I use to make low-resolution diffraction gratings takes advantage…

  20. Liquid-Crystal Point-Diffraction Interferometer

    NASA Technical Reports Server (NTRS)

    Mercer, Carolyn R.

    1996-01-01

    Liquid-crystal point-diffraction interferometer (LCPDI) invented to combine flexible control of liquid-crystal phase-shifts with robustness of point-diffraction interferometers. Produces interferograms indicative of shapes of wavefronts of laser beams having passed through or reflected from objects of interest. Interferograms combined in computers to produce phase maps describing wavefronts.

  1. QCD subgroup on diffractive and forward physics

    SciTech Connect

    Albrow, M.G.; Baker, W.; Bhatti, A.

    1996-10-01

    The goal is to understand the pomeron, and hence the behavior of total cross sections, elastic scattering and diffractive excitation, in terms of the underlying theory, QCD. A description of the basic ideas and phenomenology is followed by a discussion of hadron-hadron and electron-proton experiments. An appendix lists recommended diffractive-physics terms and definitions. 44 refs., 6 figs.

  2. Fraunhofer diffraction by arbitrary-shaped obstacles.

    PubMed

    Malinka, Aleksey V; Zege, Eleonora P

    2009-08-01

    We consider Fraunhofer diffraction by an ensemble of large arbitrary-shaped screens that are randomly oriented in the plane of a wavefront and have edges of arbitrary shape. It is shown that far outside the main diffraction peak the differential scattering cross section behaves asymptotically as theta(-3), where theta is the diffraction angle. Moreover, the differential scattering cross section depends only on the length of the contours bordering the screens and does not depend on the shape of the obstacles. As both strictly forward and total diffraction cross sections are specified by obstacle area only, the differential cross section of size-distributed obstacles is expected to be nearly independent of obstacle shape over the entire region of the diffraction angles.

  3. Crystal structure refinement from electron diffraction data

    SciTech Connect

    Dudka, A. P. Avilov, A. S.; Lepeshov, G. G.

    2008-05-15

    A procedure of crystal structure refinement from electron diffraction data is described. The electron diffraction data on polycrystalline films are processed taking into account possible overlap of reflections and two-beam interaction. The diffraction from individual single crystals in an electron microscope equipped with a precession attachment is described using the Bloch-wave method, which takes into account multibeam scattering, and a special approach taking into consideration the specific features of the diffraction geometry in the precession technique. Investigations were performed on LiF, NaF, CaF{sub 2}, and Si crystals. A method for reducing experimental data, which allows joint electron and X-ray diffraction study, is proposed.

  4. Experimental results on diffraction at CDF

    SciTech Connect

    Gallinaro, Michele; /Rockefeller U. /Lisbon, LIFEP

    2010-09-01

    Diffractive events are studied by means of identification of one or more rapidity gaps and/or a leading antiproton. Measurements of soft and hard diffractive processes have been performed at the Tevatron p{bar p} collider and presented. We report on the diffractive structure function obtained from dijet production in the range 0 < Q{sup 2} < 10,000 GeV{sup 2}, and on the |t| distribution in the region 0 < |t| < 1 GeV{sup 2} for both soft and hard diffractive events up to Q{sup 2} {approx} 4,500 GeV{sup 2}. Results on single diffractive W/Z production, forward jets, and central exclusive production of both dijets and Z-bosons are also presented.

  5. Vector diffraction analysis of optical disk readout.

    PubMed

    Cheng, X; Jia, H; Xu, D

    2000-12-01

    The optical disk readout signals from ROM disks are presented by use of a rigorous three-dimensional vector diffraction method. The optical disk is modeled as a crossed metal grating without restriction on the form of the information marks, and the permittivity of the metal is taken into account. The diffracted field from the disk is obtained by means of decomposing the focused incident beam into a spectrum of plane waves and then calculating the diffracted plane waves for each respective incident component. The readout signal is obtained by integration of the energy-flux density of the diffracted field according to the detection scheme of the optical disk system. A typical digital versatile disk (DVD) system is applied with this theory, and the result is far from that of scalar diffraction theory. PMID:18354657

  6. Femtosecond diffractive imaging of biological cells

    NASA Astrophysics Data System (ADS)

    Marvin Seibert, M.; Boutet, Sébastien; Svenda, Martin; Ekeberg, Tomas; Maia, Filipe R. N. C.; Bogan, Michael J.; Tîmneanu, Nicusor; Barty, Anton; Hau-Riege, Stefan; Caleman, Carl; Frank, Matthias; Benner, Henry; Y Lee, Joanna; Marchesini, Stefano; Shaevitz, Joshua W.; Fletcher, Daniel A.; Bajt, Sasa; Andersson, Inger; Chapman, Henry N.; Hajdu, Janos

    2010-10-01

    In a flash diffraction experiment, a short and extremely intense x-ray pulse illuminates the sample to obtain a diffraction pattern before the onset of significant radiation damage. The over-sampled diffraction pattern permits phase retrieval by iterative phasing methods. Flash diffractive imaging was first demonstrated on an inorganic test object (Chapman et al 2006 Nat. Phys. 2 839-43). We report here experiments on biological systems where individual cells were imaged, using single, 10-15 fs soft x-ray pulses at 13.5 nm wavelength from the FLASH free-electron laser in Hamburg. Simulations show that the pulse heated the sample to about 160 000 K but not before an interpretable diffraction pattern could be obtained. The reconstructed projection images return the structures of the intact cells. The simulations suggest that the average displacement of ions and atoms in the hottest surface layers remained below 3 Å during the pulse.

  7. Par-4 secretion: stoichiometry of 3-arylquinoline binding to vimentin.

    PubMed

    Sviripa, Vitaliy M; Burikhanov, Ravshan; Obiero, Josiah M; Yuan, Yaxia; Nickell, Justin R; Dwoskin, Linda P; Zhan, Chang-Guo; Liu, Chunming; Tsodikov, Oleg V; Rangnekar, Vivek M; Watt, David S

    2016-01-01

    Advanced prostate tumors usually metastasize to the lung, bone, and other vital tissues and are resistant to conventional therapy. Prostate apoptosis response-4 protein (Par-4) is a tumor suppressor that causes apoptosis in therapy-resistant prostate cancer cells by binding specifically to a receptor, Glucose-regulated protein-78 (GRP78), found only on the surface of cancer cells. 3-Arylquinolines or "arylquins" induce normal cells to release Par-4 from the intermediate filament protein, vimentin and promote Par-4 secretion that targets cancer cells in a paracrine manner. A structure-activity study identified arylquins that promote Par-4 secretion, and an evaluation of arylquin binding to the hERG potassium ion channel using a [(3)H]-dofetilide binding assay permitted the identification of structural features that separated this undesired activity from the desired Par-4 secretory activity. A binding study that relied on the natural fluorescence of arylquins and that used the purified rod domain of vimentin (residues 99-411) suggested that the mechanism behind Par-4 release involved arylquin binding to multiple sites in the rod domain.

  8. XANNpred: neural nets that predict the propensity of a protein to yield diffraction-quality crystals.

    PubMed

    Overton, Ian M; van Niekerk, C A Johannes; Barton, Geoffrey J

    2011-04-01

    Production of diffracting crystals is a critical step in determining the three-dimensional structure of a protein by X-ray crystallography. Computational techniques to rank proteins by their propensity to yield diffraction-quality crystals can improve efficiency in obtaining structural data by guiding both protein selection and construct design. XANNpred comprises a pair of artificial neural networks that each predict the propensity of a selected protein sequence to produce diffraction-quality crystals by current structural biology techniques. Blind tests show XANNpred has accuracy and Matthews correlation values ranging from 75% to 81% and 0.50 to 0.63 respectively; values of area under the receiver operator characteristic (ROC) curve range from 0.81 to 0.88. On blind test data XANNpred outperforms the other available algorithms XtalPred, PXS, OB-Score, and ParCrys. XANNpred also guides construct design by presenting graphs of predicted propensity for diffraction-quality crystals against residue sequence position. The XANNpred-SG algorithm is likely to be most useful to target selection in structural genomics consortia, while the XANNpred-PDB algorithm is more suited to the general structural biology community. XANNpred predictions that include sliding window graphs are freely available from http://www.compbio.dundee.ac.uk/xannpred

  9. Transmittance analysis of diffraction phase grating.

    PubMed

    Jing, Xufeng; Jin, Yunxia

    2011-03-20

    In order to accurately analyze and design the transmittance characteristic of a diffraction phase grating, the validity of both the scalar diffraction theory and the effective medium theory is quantitatively evaluated by the comparison of diffraction efficiencies predicted from both simplified theories to exact results calculated by the rigorous vector electromagnetic theory. The effect of surface profile parameters, including the normalized period, the normalized depth, and the fill factor for the precision of the simplified methods is determined at normal incidence. It is found that, in general, when the normalized period is more than four wavelengths of the incident light, the scalar diffraction theory is useful to estimate the transmittance of the phase grating. When the fill factor approaches 0.5, the error of the scalar method is minimized, and the scalar theory is accurate even at the grating period of two wavelengths. The transmittance characteristic as a function of the normalized period is strongly influenced by the grating duty cycle, but the diffraction performance on the normalized depth is independent of the fill factor of the grating. Additionally, the effective medium theory is accurate for evaluating the diffraction efficiency within an error of less than around 1% when no higher-order diffraction waves appear and only the zero-order waves exist. The precision of the effective medium theory for calculating transmittance properties as a function of the normalized period, the normalized groove depth, and the polarization state of incident light is insensitive to the fill factor of the phase grating. PMID:21460923

  10. Crystallization and preliminary X-ray analysis of two variants of the Escherichia coli O157 ParE2–PaaA2 toxin–antitoxin complex

    PubMed Central

    Sterckx, Yann G. J.; Haesaerts, Sarah; Van Melderen, Laurence; Loris, Remy

    2014-01-01

    The paaR2–paaA2–parE2 operon is a three-component toxin–antitoxin module encoded in the genome of the human pathogen Escherichia coli O157. The toxin (ParE2) and antitoxin (PaaA2) interact to form a nontoxic toxin–antitoxin complex. In this paper, the crystallization and preliminary characterization of two variants of the ParE2–PaaA2 toxin–antitoxin complex are described. Selenomethionine-derivative crystals of the full-length ParE2–PaaA2 toxin–antitoxin complex diffracted to 2.8 Å resolution and belonged to space group P41212 (or P43212), with unit-cell parameters a = b = 90.5, c = 412.3 Å. It was previously reported that the full-length ParE2–PaaA2 toxin–antitoxin complex forms a higher-order oligomer. In contrast, ParE2 and PaaA213–63, a truncated form of PaaA2 in which the first 12 N-terminal residues of the antitoxin have been deleted, form a heterodimer as shown by analytical gel filtration, dynamic light scattering and small-angle X-ray scattering. Crystals of the PaaA213–63–ParE2 complex diffracted to 2.7 Å resolution and belonged to space group P6122 (or P6522), with unit-cell parameters a = b = 91.6, c = 185.6 Å. PMID:25195911

  11. Par Pond vegetation status Summer 1995 -- June survey descriptive summary

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1995-06-01

    The water level of Par Pond was lowered approximately 20 feet in mid-1991 in order to protect downstream residents from possible dam failure suggested by subsidence on the downstream slope of the dam and to repair the dam. This lowering exposed both emergent and nonemergent macrophyte beds to drying conditions resulting in extensive losses. A survey of the shoreline aquatic plant communities in June 1995, three months after the refilling of Par Pond to approximately 200 feet above mean sea level, indicated that much of the original plant communities and the intermediate shoreline communities present on the exposed sediments have been lost. The extensive old-field and emergent marsh communities that were present on the exposed shoreline during the drawdown have been flooded and much of the pre-drawdown Par Pond aquatic plant communities have not had sufficient time for re-establishment. The shoreline does, however, have extensive beds of maidencane which extend from the shoreline margin to areas as deep as 2 and perhaps 3 meters. Scattered individual plants of lotus and watershield are common and may indicate likely directions of future wetland development in Par Pond. In addition, within isolated coves, which apparently received ground water seepage and/or stream surface flows during the period of the Par Pond draw down, extensive beds of waterlilies and spike rush are common. Invasion of willow and red maple occurred along the lake shoreline as well. Although not absent from this survey, evidence of the extensive redevelopment of the large cattail and eel grass beds was not observed in this first survey of Par Pond. Future surveys during the growing seasons of 1995, 1996, and 1997 along with the evaluation of satellite date to map the areal extent of the macrophyte beds of Par Pond are planned.

  12. Pars Planitis: Epidemiology, Clinical Characteristics, Management and Visual Prognosis.

    PubMed

    Ozdal, Pinar Cakar; Berker, Nilufer; Tugal-Tutkun, Ilknur

    2015-01-01

    Pars planitis is an idiopathic chronic intermediate uveitis which predominantly affects children and adolescents, and accounts for 5-26.7% of pediatric uveitis. Although an autoimmune process with a genetic predisposition has been suggested, its etiology still remains unknown. The most common presenting symptoms are floaters and blurred vision. Diffuse vitreous cells, haze, snowballs and snowbanks are typical findings of pars planitis. Peripheral retinal vasculitis, optic disc edema and anterior segment inflammation are other well-known findings. Although pars planitis is known to be a benign form of uveitis in most cases, it may become a potentially blinding disease due to complications including cataract, cystoid macular edema, vitreous opacities and optic disc edema. Cystoid macular edema is the most common cause of visual morbidity. Band keratopathy, epiretinal membrane formation, vitreous condensation, neovascularizations, vitreous hemorrhage, retinal detachment, cyclitic membranes, glaucoma and amblyopia may develop as a consequence of the chronic course of the disease. Exclusion of infectious and non-infectious causes which may present with intermediate uveitis is of utmost importance before starting treatment. Treatment of pars planitis has been a controversial issue. There is no consensus specifically for treatment of cases with minimal inflammation and relatively good visual acuity. However, current experience shows that pars planitis may cause severe inflammation and needs an aggressive treatment. A stepladder approach including corticosteroids, immunosupressive agents, anti-tumor necrosis factor-alpha and pars plana vitrectomy and/or laser photocoagulation is the most commonly used method for treatment of pars planitis. Adequate control of inflammation and prompt detection of associated complications are crucial in order to improve the overall prognosis of the disease. PMID:27051493

  13. Pars Planitis: Epidemiology, Clinical Characteristics, Management and Visual Prognosis

    PubMed Central

    Ozdal, Pinar Cakar; Berker, Nilufer; Tugal-Tutkun, Ilknur

    2015-01-01

    Pars planitis is an idiopathic chronic intermediate uveitis which predominantly affects children and adolescents, and accounts for 5-26.7% of pediatric uveitis. Although an autoimmune process with a genetic predisposition has been suggested, its etiology still remains unknown. The most common presenting symptoms are floaters and blurred vision. Diffuse vitreous cells, haze, snowballs and snowbanks are typical findings of pars planitis. Peripheral retinal vasculitis, optic disc edema and anterior segment inflammation are other well-known findings. Although pars planitis is known to be a benign form of uveitis in most cases, it may become a potentially blinding disease due to complications including cataract, cystoid macular edema, vitreous opacities and optic disc edema. Cystoid macular edema is the most common cause of visual morbidity. Band keratopathy, epiretinal membrane formation, vitreous condensation, neovascularizations, vitreous hemorrhage, retinal detachment, cyclitic membranes, glaucoma and amblyopia may develop as a consequence of the chronic course of the disease. Exclusion of infectious and non-infectious causes which may present with intermediate uveitis is of utmost importance before starting treatment. Treatment of pars planitis has been a controversial issue. There is no consensus specifically for treatment of cases with minimal inflammation and relatively good visual acuity. However, current experience shows that pars planitis may cause severe inflammation and needs an aggressive treatment. A stepladder approach including corticosteroids, immunosupressive agents, anti-tumor necrosis factor-alpha and pars plana vitrectomy and/or laser photocoagulation is the most commonly used method for treatment of pars planitis. Adequate control of inflammation and prompt detection of associated complications are crucial in order to improve the overall prognosis of the disease. PMID:27051493

  14. Comparison of the effects of PAR1 antagonists, PAR4 antagonists, and their combinations on thrombin-induced human platelet activation.

    PubMed

    Wu, Chin-Chung; Teng, Che-Ming

    2006-09-28

    Thrombin activates human platelets through proteolytic activation of two protease-activated receptors (PARs), PAR1 and PAR4. In the present study, we show that, RWJ-56110, a potent synthetic PAR1 antagonist, inhibited platelet aggregation caused by a low concentration (0.05 U/ml) of thrombin, but lost its effectiveness when higher concentrations of thrombin were used as stimulators. YD-3, a non-peptide PAR4 antagonist, alone had little or no effect on thrombin-induced platelet aggregation, significantly enhanced the anti-aggregatory activity of PAR1 antagonist. In addition, we demonstrate for the first time that P-selectin expression in thrombin-stimulated platelets can be synergistically prevented by combined treatment of PAR1 antagonist and PAR4 antagonist. These results indicate that thrombin-induced platelet activation cannot be effectively inhibited by just blocking either single thrombin receptor pathway, and suggest a rationale for potential combination therapy in arterial thrombosis. PMID:16890935

  15. Novel Aspects of Hard Diffraction in QCD

    SciTech Connect

    Brodsky, Stanley J.; /SLAC

    2005-12-14

    Initial- and final-state interactions from gluon-exchange, normally neglected in the parton model have a profound effect in QCD hard-scattering reactions, leading to leading-twist single-spin asymmetries, diffractive deep inelastic scattering, diffractive hard hadronic reactions, and nuclear shadowing and antishadowing--leading-twist physics not incorporated in the light-front wavefunctions of the target computed in isolation. I also discuss the use of diffraction to materialize the Fock states of a hadronic projectile and test QCD color transparency.

  16. 3D printed diffractive terahertz lenses.

    PubMed

    Furlan, Walter D; Ferrando, Vicente; Monsoriu, Juan A; Zagrajek, Przemysław; Czerwińska, Elżbieta; Szustakowski, Mieczysław

    2016-04-15

    A 3D printer was used to realize custom-made diffractive THz lenses. After testing several materials, phase binary lenses with periodic and aperiodic radial profiles were designed and constructed in polyamide material to work at 0.625 THz. The nonconventional focusing properties of such lenses were assessed by computing and measuring their axial point spread function (PSF). Our results demonstrate that inexpensive 3D printed THz diffractive lenses can be reliably used in focusing and imaging THz systems. Diffractive THz lenses with unprecedented features, such as extended depth of focus or bifocalization, have been demonstrated. PMID:27082335

  17. A scattering approach to sea wave diffraction

    NASA Astrophysics Data System (ADS)

    Corradini, M. L.; Garbuglia, M.; Maponi, P.; Ruggeri, M.

    2016-06-01

    This paper intends to show a model for the diffraction of sea waves approaching an OWC device, which converts the sea waves motion into mechanical energy and then electrical energy. This is a preliminary study to the optimisation of the device, in fact the computation of sea waves diffraction around the device allows the estimation of the sea waves energy which enters into the device. The computation of the diffraction phenomenon is the result of a sea waves scattering problem, solved with an integral equation method.

  18. New diffractive results from the Tevatron

    SciTech Connect

    Gallinaro, Michele; /Rockefeller U.

    2005-05-01

    Experimental results in diffractive processes are summarized and a few notable characteristics described in terms of Quantum Chromodynamics. Exclusive dijet production is used to establish a benchmark for future experiments in the quest for diffractive Higgs production at the Large Hadron Collider. Using new data from the Tevatron and dedicated diffractive triggers, no excess over a smooth falling distribution for exclusive dijet events could be found. Stringent upper limits on the exclusive dijet production cross section are presented. The quark/gluon composition of dijet final states is used to provide additional hints on exclusive dijet production.

  19. Regulation of protease-activated receptor (PAR) 1 and PAR4 signaling in human platelets by compartmentalized cyclic nucleotide actions.

    PubMed

    Bilodeau, Matthew L; Hamm, Heidi E

    2007-08-01

    Thrombin potently regulates human platelets by the G protein-coupled receptors protease-activated receptor (PAR) 1 and PAR4. Platelet activation by thrombin and other agonists is broadly inhibited by prostacyclin and nitric oxide acting through adenylyl and guanylyl cyclases to elevate cAMP and cGMP levels, respectively. Using forskolin and YC-1 [3-(5'-hydroxymethyl-2'-furyl)-1-benzylindazole] to selectively activate the adenylyl and guanylyl cyclases, respectively, and the membrane-permeable analogs N(6),2'-O-dibutyryladenosine-3'-5'-cAMP (dibutyryl-cAMP) and 8-(4-parachlorophenylthoi)-cGMP (8-pCPT-cGMP), we sought to identify key antiplatelet steps for cyclic nucleotide actions in blocking platelet activation by PAR1 versus PAR4. Platelet aggregation by PAR1 or PAR4 was inhibited with similar EC(50) of 1.2 to 2.1 microM forskolin, 31 to 33 microM YC-1, 57 to 150 microM dibutyryl-cAMP, and 220 to 410 microM 8-pCPT-cGMP. There was a marked left shift in the inhibitory potencies of forskolin and YC-1 for alpha-granule release and glycoprotein IIbIIIa/integrin alphaIIbbeta3 activation (i.e., EC(50) of 1-60 and 40-1300 nM, respectively) that was not observed for dibutyryl-cAMP and 8-pCPT-cGMP (i.e., EC(50) of 200-600 and 40-140 microM, respectively). This inhibition was essentially instantaneous, and measurements of cyclic nucleotide levels and kinase activities support a model of compartmentation involving the cyclic nucleotide effectors and regulators and the key molecular targets for this platelet inhibition. The different sensitivities of PAR1 and PAR4 to inhibition of calcium mobilization and dense granule release identify key antiplatelet steps for cyclic nucleotide actions and are consistent with the signaling models for these receptors. Specifically, PAR4 inhibition depends on the regulation of both calcium mobilization and dense granule release, and PAR1 inhibition depends predominantly on the regulation of dense granule release. PMID:17525299

  20. Stochastic Self-Assembly of ParB Proteins Builds the Bacterial DNA Segregation Apparatus.

    PubMed

    Sanchez, Aurore; Cattoni, Diego I; Walter, Jean-Charles; Rech, Jérôme; Parmeggiani, Andrea; Nollmann, Marcelo; Bouet, Jean-Yves

    2015-08-26

    Many canonical processes in molecular biology rely on the dynamic assembly of higher-order nucleoprotein complexes. In bacteria, the assembly mechanism of ParABS, the nucleoprotein super-complex that actively segregates the bacterial chromosome and many plasmids, remains elusive. We combined super-resolution microscopy, quantitative genome-wide surveys, biochemistry, and mathematical modeling to investigate the assembly of ParB at the centromere-like sequences parS. We found that nearly all ParB molecules are actively confined around parS by a network of synergistic protein-protein and protein-DNA interactions. Interrogation of the empirically determined, high-resolution ParB genomic distribution with modeling suggests that instead of binding only to specific sequences and subsequently spreading, ParB binds stochastically around parS over long distances. We propose a new model for the formation of the ParABS partition complex based on nucleation and caging: ParB forms a dynamic lattice with the DNA around parS. This assembly model and approach to characterizing large-scale, dynamic interactions between macromolecules may be generalizable to many unrelated machineries that self-assemble in superstructures. PMID:27135801

  1. Adjustable hybrid diffractive/refractive achromatic lens.

    PubMed

    Valley, Pouria; Savidis, Nickolaos; Schwiegerling, Jim; Dodge, Mohammad Reza; Peyman, Gholam; Peyghambarian, N

    2011-04-11

    We demonstrate a variable focal length achromatic lens that consists of a flat liquid crystal diffractive lens and a pressure-controlled fluidic refractive lens. The diffractive lens is composed of a flat binary Fresnel zone structure and a thin liquid crystal layer, producing high efficiency and millisecond switching times while applying a low ac voltage input. The focusing power of the diffractive lens is adjusted by electrically modifying the sub-zones and re-establishing phase wrapping points. The refractive lens includes a fluid chamber with a flat glass surface and an opposing elastic polydimethylsiloxane (PDMS) membrane surface. Inserting fluid volume through a pump system into the clear aperture region alters the membrane curvature and adjusts the refractive lens' focal position. Primary chromatic aberration is remarkably reduced through the coupling of the fluidic and diffractive lenses at selected focal lengths. Potential applications include miniature color imaging systems, medical and ophthalmic devices, or any design that utilizes variable focal length achromats.

  2. X-ray diffraction: instrumentation and applications.

    PubMed

    Bunaciu, Andrei A; Udriştioiu, Elena Gabriela; Aboul-Enein, Hassan Y

    2015-01-01

    X-ray diffraction (XRD) is a powerful nondestructive technique for characterizing crystalline materials. It provides information on structures, phases, preferred crystal orientations (texture), and other structural parameters, such as average grain size, crystallinity, strain, and crystal defects. X-ray diffraction peaks are produced by constructive interference of a monochromatic beam of X-rays scattered at specific angles from each set of lattice planes in a sample. The peak intensities are determined by the distribution of atoms within the lattice. Consequently, the X-ray diffraction pattern is the fingerprint of periodic atomic arrangements in a given material. This review summarizes the scientific trends associated with the rapid development of the technique of X-ray diffraction over the past five years pertaining to the fields of pharmaceuticals, forensic science, geological applications, microelectronics, and glass manufacturing, as well as in corrosion analysis.

  3. Diffraction-limited ultrabroadband terahertz spectroscopy

    NASA Astrophysics Data System (ADS)

    Baillergeau, M.; Maussang, K.; Nirrengarten, T.; Palomo, J.; Li, L. H.; Linfield, E. H.; Davies, A. G.; Dhillon, S.; Tignon, J.; Mangeney, J.

    2016-05-01

    Diffraction is the ultimate limit at which details of objects can be resolved in conventional optical spectroscopy and imaging systems. In the THz spectral range, spectroscopy systems increasingly rely on ultra-broadband radiation (extending over more 5 octaves) making a great challenge to reach resolution limited by diffraction. Here, we propose an original easy-to-implement wavefront manipulation concept to achieve ultrabroadband THz spectroscopy system with diffraction-limited resolution. Applying this concept to a large-area photoconductive emitter, we demonstrate diffraction-limited ultra-broadband spectroscopy system up to 14.5 THz with a dynamic range of 103. The strong focusing of ultrabroadband THz radiation provided by our approach is essential for investigating single micrometer-scale objects such as graphene flakes or living cells, and besides for achieving intense ultra-broadband THz electric fields.

  4. New diffraction results from the Tevatron

    SciTech Connect

    Terashi, Koji; /Rockefeller U.

    2006-05-01

    We present new results from studies on diffractive dijet production and exclusive production of dijet and diphoton obtained by the CDF Collaboration in proton-antiproton collisions at the Fermilab Tevatron.

  5. Tension in the LHC diffractive data?

    SciTech Connect

    Gotsman, Errol

    2015-04-10

    I discuss the LHC diffractive data, and compare it to predicted energy behaviour of various models. I suggest that the so called 'tension' between the experimental results, maybe due to the different Monte Carlo programs used.

  6. Diffraction-limited ultrabroadband terahertz spectroscopy

    PubMed Central

    Baillergeau, M.; Maussang, K.; Nirrengarten, T.; Palomo, J.; Li, L. H.; Linfield, E. H.; Davies, A. G.; Dhillon, S.; Tignon, J.; Mangeney, J.

    2016-01-01

    Diffraction is the ultimate limit at which details of objects can be resolved in conventional optical spectroscopy and imaging systems. In the THz spectral range, spectroscopy systems increasingly rely on ultra-broadband radiation (extending over more 5 octaves) making a great challenge to reach resolution limited by diffraction. Here, we propose an original easy-to-implement wavefront manipulation concept to achieve ultrabroadband THz spectroscopy system with diffraction-limited resolution. Applying this concept to a large-area photoconductive emitter, we demonstrate diffraction-limited ultra-broadband spectroscopy system up to 14.5 THz with a dynamic range of 103. The strong focusing of ultrabroadband THz radiation provided by our approach is essential for investigating single micrometer-scale objects such as graphene flakes or living cells, and besides for achieving intense ultra-broadband THz electric fields. PMID:27142959

  7. Diffraction Physics with ALICE at the LHC

    NASA Astrophysics Data System (ADS)

    Evdokimov, Sergey

    2015-06-01

    The ALICE experiment is equipped with a wide range of detectors providing excellent tracking and particle identification in the central region, as well as forward detectors with extended pseudorapidity coverage, which are well suited for studying diffractive processes. Cross section measurements of single and double diffractive processes performed by ALICE in pp collisions at √ {s} = 0.9, ; 2.76, ; 7 ; {textrm{TeV}} will be reported. Currently, ALICE is studying double-gap events in pp collisions at √ {s} = 7 ; {textrm{TeV}}, which give an insight into the central diffraction processes: current status and future perspectives will be discussed. The upgrade plans for diffraction studies, further extending the pseudorapidity acceptance of the ALICE setup for the forthcoming Run 2 of the LHC, will be outlined.

  8. Medium for polarization-sensitive diffraction gratings.

    PubMed

    Vretik, L O; Davidenko, N A; Davidenko, I I; Syromyatnikov, V G; Studzinsky, S L; Zagnij, V V

    2014-04-01

    New polymers applicable for optoelectronics are developed and investigated. The ability to form photoinduced anisotropy in the media based on the films of these polymers is demonstrated. The media can be used for recording of polarization-sensitive diffraction gratings.

  9. An Electronic Analog of the Diffraction Grating.

    ERIC Educational Resources Information Center

    MacLeod, A. M.

    1978-01-01

    Gives an outline description of electronic circuitry which is analogous to the optical diffraction grating or to crystals used in the Bragg reflection of X-rays or electron waves, and explains how to use it. (Author/GA)

  10. Inelastic diffraction and equivalence of states

    NASA Astrophysics Data System (ADS)

    Malecki, A.

    1991-09-01

    A new approach to diffraction, based on the concept of equivalent states, is applied to the inclusive inelastic scattering. Differences from the classical description of Good and Walker are pointed out.

  11. Scalar limitations of diffractive optical elements

    NASA Technical Reports Server (NTRS)

    Johnson, Eric G.; Hochmuth, Diane; Moharam, M. G.; Pommet, Drew

    1993-01-01

    In this paper, scalar limitations of diffractive optic components are investigated using coupled wave analyses. Results are presented for linear phase gratings and fanout devices. In addition, a parametric curve is given which correlates feature size with scalar performance.

  12. Par Pond vegetation status Summer 1995 -- September survey descriptive summary

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1995-09-01

    The water level of Par Pond was lowered approximately 20 feet in mid-1991 in order to protect downstream residents from possible dam failure suggested by subsidence on the downstream slope of the dam and to repair the dam. This lowering exposed both emergent and nonemergent macrophyte beds to drying conditions resulting in extensive losses. A survey of the emergent shoreline aquatic plant communities began in June 1995, three months after the refilling of Par Pond to approximately 200 feet above mean sea level and continued with this mid-September survey. Communities similar to the pre-drawdown Par Pond aquatic plant communities are becoming re-established; especially, beds of maidencane, lotus, waterlily, and watershield are now extensive and well established. Cattail occurrence continues to increase, but large beds common to Par Pond prior to the drawdown have not formed. Future surveys during the late growing seasons of 1995, and throughout 1996 and 1997, along with the evaluation of satellite data to map the areal extent of the macrophyte beds of Par Pond, are planned.

  13. Par Pond vegetation status Summer 1995 -- October survey descriptive summary

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1995-11-01

    The water level of Par Pond was lowered approximately 20 feet in mid-1991 in order to protect downstream residents from possible dam failure suggested by subsidence on the downstream slope of the dam and to repair the dam. This lowering exposed both emergent and nonemergent macrophyte beds to drying conditions resulting in extensive losses. A survey of the emergent shoreline aquatic plant communities began in June 1995, three months after the refilling of Par Pond to approximately 200 feet above mean sea level and continued with this late October survey. Communities similar to the pre-drawdown Par Pond aquatic plant communities are becoming re-established; especially, beds of maiden cane, lotus, waterlily, and watershield are now extensive and well established. Cattail occurrence continues to increase, but large beds common to Par Pond prior to the drawdown have not formed. Future surveys throughout 1996 and 1997, along with the continued evaluation of satellite data to map the areal extent of the macrophyte beds of Par Pond, are planned.

  14. Diffraction pattern of gratings with erosion

    NASA Astrophysics Data System (ADS)

    Olivares-Pérez, Arturo; Fuentes-Tapia, Israel

    2015-03-01

    We present a theoretical study of amplitude diffraction gratings using computer simulating, which consists of a random sampling of points on the image grating to determine the points to be plotted and the points to remove, to simulate erosion in amplitude on the grating. We show their behavior in the diffraction patterns and the induced noise by limiting the number of points that representing the image of the eroded gratings and their symmetry.

  15. Breakdown of QCD factorization in hard diffraction

    NASA Astrophysics Data System (ADS)

    Kopeliovich, B. Z.

    2016-07-01

    Factorization of short- and long-distance interactions is severely broken in hard diffractive hadronic collisions. Interaction with the spectator partons leads to an interplay between soft and hard scales, which results in a leading twist behavior of the cross section, on the contrary to the higher twist predicted by factorization. This feature is explicitly demonstrated for diffractive radiation of abelian (Drell-Yan, gauge bosons, Higgs) and non-abelian (heavy flavors) particles.

  16. Characterization of proteins by powder diffraction.

    SciTech Connect

    Von Dreele, R.; X-Ray Science Division

    2009-01-01

    A simulation of a protein powder diffraction pattern was stunning in the apparent amount of information that was seen. A subsequent experiment on metmyoglobin gave a powder diffraction pattern that showed very little sample broadening; the peak widths were essentially limited by the instrument resolution. The challenge is to make use of this in protein structure analysis. This talk will recall some of those early experiments and data analyses as well as an overview of current progress and future possibilities.

  17. Generalized phase diffraction gratings with tailored intensity.

    PubMed

    Albero, Jorge; Moreno, Ignacio; Davis, Jeffrey A; Cottrell, Don M; Sand, David

    2012-10-15

    We report the generation of continuous phase masks designed to generate a set of target diffraction orders with defined relative intensity weights. We apply a previously reported analytic calculation that requires resolving a single equation with a set of parameters defining the target diffraction orders. Then the same phase map is extended to other phase patterns such as vortex generating/sensing gratings. Results are demonstrated experimentally with a parallel-aligned spatial light modulator.

  18. Active diffraction gratings: Development and tests

    SciTech Connect

    Bonora, S.; Frassetto, F.; Poletto, L.; Zanchetta, E.; Della Giustina, G.; Brusatin, G.

    2012-12-15

    We present the realization and characterization of an active spherical diffraction grating with variable radius of curvature to be used in grazing-incidence monochromators. The device consists of a bimorph deformable mirror on the top of which a diffraction grating with laminar profile is realized by UV lithography. The experimental results show that the active grating can optimize the beam focalization of visible wavelengths through its rotation and focus accommodation.

  19. Active diffraction gratings: development and tests.

    PubMed

    Bonora, S; Frassetto, F; Zanchetta, E; Della Giustina, G; Brusatin, G; Poletto, L

    2012-12-01

    We present the realization and characterization of an active spherical diffraction grating with variable radius of curvature to be used in grazing-incidence monochromators. The device consists of a bimorph deformable mirror on the top of which a diffraction grating with laminar profile is realized by UV lithography. The experimental results show that the active grating can optimize the beam focalization of visible wavelengths through its rotation and focus accommodation.

  20. Three-dimensional micro-diffraction modeling.

    PubMed

    Castañeda, Román

    2014-03-20

    Squared elementary cells with correlated radiant point sources are presented as basic structures for characterizing the propagation of the field emitted by two-dimensional planar sources of any shape and in arbitrary state of spatial coherence. The field is transported on a finite expansion of nonparaxial modes, whose propagation in the micro-diffraction domain is discussed under both the diffraction and the interference conditions.

  1. FESDIF -- Finite Element Scalar Diffraction theory code

    SciTech Connect

    Kraus, H.G.

    1992-09-01

    This document describes the theory and use of a powerful scalar diffraction theory based computer code for calculation of intensity fields due to diffraction of optical waves by two-dimensional planar apertures and lenses. This code is called FESDIF (Finite Element Scalar Diffraction). It is based upon both Fraunhofer and Kirchhoff scalar diffraction theories. Simplified routines for circular apertures are included. However, the real power of the code comes from its basis in finite element methods. These methods allow the diffracting aperture to be virtually any geometric shape, including the various secondary aperture obstructions present in telescope systems. Aperture functions, with virtually any phase and amplitude variations, are allowed in the aperture openings. Step change aperture functions are accommodated. The incident waves are considered to be monochromatic. Plane waves, spherical waves, or Gaussian laser beams may be incident upon the apertures. Both area and line integral transformations were developed for the finite element based diffraction transformations. There is some loss of aperture function generality in the line integral transformations which are typically many times more computationally efficient than the area integral transformations when applicable to a particular problem.

  2. PAR-1 phosphorylates Mind bomb to promote vertebrate neurogenesis

    PubMed Central

    Ossipova, Olga; Ezan, Jerome; Sokol, Sergei Y.

    2010-01-01

    Summary Generation of neurons in the vertebrate central nervous system requires complex transcriptional regulatory network and signaling processes in polarized neuroepithelial progenitor cells. Here we demonstrate that neurogenesis in the Xenopus neural plate in vivo and mammalian neural progenitors in vitro involves intrinsic antagonistic activities of the polarity proteins PAR-1 and aPKC. Furthermore, we show that Mind bomb (Mib), a ubiquitin ligase that promotes Notch ligand trafficking and activity, is a crucial molecular substrate for PAR-1. The phosphorylation of Mib by PAR-1 results in Mib degradation, repression of Notch signaling and stimulation of neuronal differentiation. These observations suggest a conserved mechanism for neuronal fate determination that might operate during asymmetric divisions of polarized neural progenitor cells. PMID:19686683

  3. Overview Of Diffractive Optics At Honeywell

    NASA Astrophysics Data System (ADS)

    Cox, J. Allen

    1988-05-01

    Interest in holographic, or diffractive, optics has been rekindled in the last few years with demonstrated advances in three areas: computer-aided design (CAD) tools, VLSI lithographic and dry etching processes, and mathematical modeling of diffractive elements.1 The availability of CAD tools and electron-beam lithography led first to the emergence of computer-generated holography (CGH). CGH work at Honeywell was started and brought to maturity by Arnold2 in 1980-1983. However, because of the inherently low diffraction efficiency (-10%), lithographic CGHs have found a place in only a relatively few practical applications, such as testing diamond turned aspherics, and thus CGHs have not been widely accepted within industry. The first step in changing this situation came in the 1970s with numerical approaches to rigorously solve the vector field equations for diffraction from blazed gratings.3 The extensive numerical results from these models not only showed that high diffraction efficiencies are possible with etched surface profiles, but also indicated the sensitivity to various profile configurations and design parameters. Veldkamp et al.1,4'-'61 at MIT Lincoln Laboratories have taken the final step necessary to establish the practical feasibility of diffractive optics by using reactive ion etching techniques to produce the surface profiles prescribed by the numerical models and delineated by CGH lithographic masks. With this combined approach, they have demonstrated the feasibility of high-efficiency diffractive elements for a variety of diverse applications, such as the CO2 laser radar telescope,4 coherent beam addition of laser diode arrays,5 and on-axis, broadband, aspheric lens elements for infrared imagers.6 These elements are fabricated using well-established VLSI lithographic and dry etching techniques. Moreover, the ability to replicate each diffractive element provides the potential for high-volume, low-cost producibility. With this precedent, Honeywell

  4. Quantitative energy-dispersive x-ray diffraction for identification of counterfeit medicines: a preliminary study

    NASA Astrophysics Data System (ADS)

    Crews, Chiaki C. E.; O'Flynn, Daniel; Sidebottom, Aiden; Speller, Robert D.

    2015-06-01

    The prevalence of counterfeit and substandard medicines has been growing rapidly over the past decade, and fast, nondestructive techniques for their detection are urgently needed to counter this trend. In this study, energy-dispersive X-ray diffraction (EDXRD) combined with chemometrics was assessed for its effectiveness in quantitative analysis of compressed powder mixtures. Although EDXRD produces lower-resolution diffraction patterns than angular-dispersive X-ray diffraction (ADXRD), it is of interest for this application as it carries the advantage of allowing the analysis of tablets within their packaging, due to the higher energy X-rays used. A series of caffeine, paracetamol and microcrystalline cellulose mixtures were prepared with compositions between 0 - 100 weight% in 20 weight% steps (22 samples in total, including a centroid mixture), and were pressed into tablets. EDXRD spectra were collected in triplicate, and a principal component analysis (PCA) separated these into their correct positions in the ternary mixture design. A partial least-squares (PLS) regression model calibrated using this training set was validated using both segmented cross-validation, and with a test set of six samples (mixtures in 8:1:1 and 5⅓:2⅓:2⅓ ratios) - the latter giving a root-mean square error of prediction (RMSEP) of 1.30, 2.25 and 2.03 weight% for caffeine, paracetamol and cellulose respectively. These initial results are promising, with RMSEP values on a par with those reported in the ADXRD literature.

  5. Fast diffraction computation algorithms based on FFT

    NASA Astrophysics Data System (ADS)

    Logofatu, Petre Catalin; Nascov, Victor; Apostol, Dan

    2010-11-01

    The discovery of the Fast Fourier transform (FFT) algorithm by Cooley and Tukey meant for diffraction computation what the invention of computers meant for computation in general. The computation time reduction is more significant for large input data, but generally FFT reduces the computation time with several orders of magnitude. This was the beginning of an entire revolution in optical signal processing and resulted in an abundance of fast algorithms for diffraction computation in a variety of situations. The property that allowed the creation of these fast algorithms is that, as it turns out, most diffraction formulae contain at their core one or more Fourier transforms which may be rapidly calculated using the FFT. The key in discovering a new fast algorithm is to reformulate the diffraction formulae so that to identify and isolate the Fourier transforms it contains. In this way, the fast scaled transformation, the fast Fresnel transformation and the fast Rayleigh-Sommerfeld transform were designed. Remarkable improvements were the generalization of the DFT to scaled DFT which allowed freedom to choose the dimensions of the output window for the Fraunhofer-Fourier and Fresnel diffraction, the mathematical concept of linearized convolution which thwarts the circular character of the discrete Fourier transform and allows the use of the FFT, and last but not least the linearized discrete scaled convolution, a new concept of which we claim priority.

  6. Surface diffusion studies by optical diffraction techniques

    SciTech Connect

    Xiao, X.D.

    1992-11-01

    The newly developed optical techniques have been combined with either second harmonic (SH) diffraction or linear diffraction off a monolayer adsorbate grating for surface diffusion measurement. Anisotropy of surface diffusion of CO on Ni(l10) was used as a demonstration for the second harmonic dim reaction method. The linear diffraction method, which possesses a much higher sensitivity than the SH diffraction method, was employed to study the effect of adsorbate-adsorbate interaction on CO diffusion on Ni(l10) surface. Results showed that only the short range direct CO-CO orbital overlapping interaction influences CO diffusion but not the long range dipole-dipole and CO-NI-CO interactions. Effects of impurities and defects on surface diffusion were further explored by using linear diffraction method on CO/Ni(110) system. It was found that a few percent S impurity can alter the CO diffusion barrier height to a much higher value through changing the Ni(110) surface. The point defects of Ni(l10) surface seem to speed up CO diffusion significantly. A mechanism with long jumps over multiple lattice distance initiated by CO filled vacancy is proposed to explain the observed defect effect.

  7. Diffraction of entangled particles by light gratings

    SciTech Connect

    Sancho, Pedro

    2015-04-15

    We analyze the diffraction regime of the Kapitza–Dirac effect for particles entangled in momentum. The detection patterns show two-particle interferences. In the single-mode case we identify a discontinuity in the set of joint detection probabilities, associated with the disconnected character of the space of non-separable states. For Gaussian multi-mode states we derive the diffraction patterns, providing an example of the dependence of the light–matter interaction on entanglement. When the particles are identical, we can explore the relation between exchange and entanglement effects. We find a complementary behavior between overlapping and Schmidt’s number. In particular, symmetric entanglement can cancel the exchange effects. - Highlights: • Kapitza–Dirac diffraction of entangled particles shows multiparticle interference. • There is a discontinuity in the set of joint detection patterns of entangled states. • We find a complementary behavior between overlapping and Schmidt’s number. • Symmetric entanglement can cancel the exchange effects.

  8. Adaptable Diffraction Gratings With Wavefront Transformation

    NASA Technical Reports Server (NTRS)

    Iazikov, Dmitri; Mossberg, Thomas W.; Greiner, Christoph M.

    2010-01-01

    Diffraction gratings are optical components with regular patterns of grooves, which angularly disperse incoming light by wavelength. Traditional diffraction gratings have static planar, concave, or convex surfaces. However, if they could be made so that they can change the surface curvature at will, then they would be able to focus on particular segments, self-calibrate, or perform fine adjustments. This innovation creates a diffraction grating on a deformable surface. This surface could be bent at will, resulting in a dynamic wavefront transformation. This allows for self-calibration, compensation for aberrations, enhancing image resolution in a particular area, or performing multiple scans using different wavelengths. A dynamic grating gives scientists a new ability to explore wavefronts from a variety of viewpoints.

  9. Data Exploration Toolkit for serial diffraction experiments

    DOE PAGES

    Zeldin, Oliver B.; Brewster, Aaron S.; Hattne, Johan; Uervirojnangkoorn, Monarin; Lyubimov, Artem Y.; Zhou, Qiangjun; Zhao, Minglei; Weis, William I.; Sauter, Nicholas K.; Brunger, Axel T.

    2015-01-23

    Ultrafast diffraction at X-ray free-electron lasers (XFELs) has the potential to yield new insights into important biological systems that produce radiation-sensitive crystals. An unavoidable feature of the 'diffraction before destruction' nature of these experiments is that images are obtained from many distinct crystals and/or different regions of the same crystal. Combined with other sources of XFEL shot-to-shot variation, this introduces significant heterogeneity into the diffraction data, complicating processing and interpretation. To enable researchers to get the most from their collected data, a toolkit is presented that provides insights into the quality of, and the variation present in, serial crystallography datamore » sets. These tools operate on the unmerged, partial intensity integration results from many individual crystals, and can be used on two levels: firstly to guide the experimental strategy during data collection, and secondly to help users make informed choices during data processing.« less

  10. Beyond the diffraction limit via optical amplification.

    PubMed

    Kellerer, Aglaé N; Ribak, Erez N

    2016-07-15

    In a previous article [Astron. Astrophys.561, A118 (2014)], we suggested a method to overcome the diffraction limit behind a telescope. We discuss and extend recent numerical simulations and test whether it is indeed possible to use photon amplification to enhance the angular resolution of a telescope or a microscope beyond the diffraction limit. An essential addition is the proposal to select events with an above-average ratio of stimulated to spontaneous photons. The analysis shows that the diffraction limit of a telescope is surpassed by a factor of 10 for an amplifier gain of 200, if the analysis is restricted to a tenth of the incoming astronomical photons. A gain of 70 is sufficient with a hundredth of the photons. More simulations must be performed to account for the bunching of spontaneous photons. PMID:27420490

  11. Diffraction at the Tevatron and the LHC

    NASA Astrophysics Data System (ADS)

    Royon, C.

    2008-09-01

    In this paper, we present and discuss the most recent results on inclusive diffraction at the Tevatron collider and give the prospects at the LHC. We also describe the search for exclusive events at the Tevatron. Of special interest is the exclusive production of Higgs boson and heavy objects (W, top, stop pairs) at the LHC which will require precise measurements and analyses of inclusive and exclusive diffraction to constrain further the gluon density in the pomeron. At the end of the paper, we describe the projects to install forward detectors at the LHC to fulfil these measurements. We also describe the diffractive experiments accepted or in project at the LHC: TOTEM, ALFA in ATLAS, and the AFP/FP420 projects.

  12. Data Exploration Toolkit for serial diffraction experiments

    PubMed Central

    Zeldin, Oliver B.; Brewster, Aaron S.; Hattne, Johan; Uervirojnangkoorn, Monarin; Lyubimov, Artem Y.; Zhou, Qiangjun; Zhao, Minglei; Weis, William I.; Sauter, Nicholas K.; Brunger, Axel T.

    2015-01-01

    Ultrafast diffraction at X-ray free-electron lasers (XFELs) has the potential to yield new insights into important biological systems that produce radiation-sensitive crystals. An unavoidable feature of the ‘diffraction before destruction’ nature of these experiments is that images are obtained from many distinct crystals and/or different regions of the same crystal. Combined with other sources of XFEL shot-to-shot variation, this introduces significant heterogeneity into the diffraction data, complicating processing and interpretation. To enable researchers to get the most from their collected data, a toolkit is presented that provides insights into the quality of, and the variation present in, serial crystallography data sets. These tools operate on the unmerged, partial intensity integration results from many individual crystals, and can be used on two levels: firstly to guide the experimental strategy during data collection, and secondly to help users make informed choices during data processing. PMID:25664746

  13. Diffraction at the Tevatron: CDF results

    SciTech Connect

    Goulianos, Konstantin; /Rockefeller U.

    2006-11-01

    The diffractive program of the CDF Collaboration at the Fermilab Tevatron p{bar p} Collider is reviewed with emphasis on recent results from Run II at {radical}s = 1.96 TeV. Updated results on the x{sub B{sub j}} and Q{sup 2} dependence of the diffractive structure function obtained from dijet production, and on the slope parameter of the t-distribution of diffractive events as a function of Q{sup 2} in the range 1 GeV{sup 2} < Q{sup 2} < 10{sup 4} GeV{sup 2}, are presented and compared with theoretical expectations. Results on cross sections for exclusive dijet and diphoton production are also presented and used to calibrate theoretical estimates for exclusive Higgs production at the Large Hadron Collider.

  14. Ultra-high density diffraction grating

    DOEpatents

    Padmore, Howard A.; Voronov, Dmytro L.; Cambie, Rossana; Yashchuk, Valeriy V.; Gullikson, Eric M.

    2012-12-11

    A diffraction grating structure having ultra-high density of grooves comprises an echellette substrate having periodically repeating recessed features, and a multi-layer stack of materials disposed on the echellette substrate. The surface of the diffraction grating is planarized, such that layers of the multi-layer stack form a plurality of lines disposed on the planarized surface of the structure in a periodical fashion, wherein lines having a first property alternate with lines having a dissimilar property on the surface of the substrate. For example, in one embodiment, lines comprising high-Z and low-Z materials alternate on the planarized surface providing a structure that is suitable as a diffraction grating for EUV and soft X-rays. In some embodiments, line density of between about 10,000 lines/mm to about 100,000 lines/mm is provided.

  15. Higher order diffractions from a circular disk

    NASA Technical Reports Server (NTRS)

    Marsland, Diane P.; Balanis, Constantine A.; Brumley, Stephen A.

    1987-01-01

    The backscattering from a circular disk is analyzed using the geometrical theory of diffraction. First-, second-, and third-order diffractions are included in the hard polarization analysis, while first-, second-, and third-order slope diffractions are included for soft polarization. Improvements in the prediction of the monostatic radar cross section over previous works are noted. For hard polarization, an excellent agreement is exhibited between experimental and theoretical results, while a very good agreement is noted for soft polarization. To further improve the soft polarization results for wide angles, a model for the creeping wave or circulating current on the edge of the disk is obtained and used to find an additional component of the backscattered field. The addition of this component significantly improves the results for wide angles, leading to excellent agreement for soft polarization also. An axial-caustic correction method using equivalent currents is also included in the analysis.

  16. Par Pond vegetation status summer 1995 - July survey descriptive summary

    SciTech Connect

    Mackey, H.E. Jr.; Riley, R.S.

    1995-07-01

    A survey of the emergent shoreline aquatic plant, communities began in June 1995, three months after the refilling of Par Pond to approximately 200 feet (61 meters) above mean sea level, and continued with this July survey. Aquatic plant communities, similar to the pre-drawdown Par Pond communities, are becoming reestablished. Beds of maidencane (Panicum hemitomon), lotus (Nelumbo lutea), water lily (Nymphaea odorata), and watershield (Brasenia schreberi) are now extensive and well established. In addition, within isolated coves, extensive beds of water lilies and spike-rush (Eleocharis sp.) are common. Cattail occurrence has increased since refill, but large beds common to Par Pond prior to the drawdown have not formed. Invasion of willow (Salix sp.) and red maple (Acer rubrum) occurred along the lake shoreline during drawdown. The red maples along the present shoreline are beginning to show evidence of stress and mortality from flooding over the past four months. Some of the willows appear to be stressed as well. The loblolly pines (Pinus taeda), which were flooded in all but the shallow shoreline areas, are now dead. Future surveys are planned for the growing seasons of 1995, 1996, and 1997, along with the evaluation of satellite data for mapping the areal extent of the macrophyte beds of Par Pond.

  17. The Pars Triangularis in Dyslexia and ADHD: A Comprehensive Approach

    ERIC Educational Resources Information Center

    Kibby, Michelle Y.; Kroese, Judith M.; Krebbs, Hillery; Hill, Crystal E.; Hynd, George W.

    2009-01-01

    Limited research has been conducted on the structure of the pars triangularis (PT) in dyslexia despite functional neuroimaging research finding it may play a role in phonological processing. Furthermore, research to date has not examined PT size in ADHD even though the right inferior frontal region has been implicated in the disorder. Hence, one…

  18. Aqueous misdirection following pars plana vitrectomy and silicone oil injection

    PubMed Central

    Ghoraba, Hammouda H; Ghali, Ali Ahmed; Mansour, Hosam Othman

    2015-01-01

    Purpose To report a retrospective series of seven phakic eyes of seven patients suffering from a malignant glaucoma-like syndrome following pars plana vitrectomy and silicone oil (SO) injection. Materials and methods Seven eyes with retinal detachment treated with pars plana vitrectomy with or without scleral buckling with SO tamponade. This was followed by cataract extraction to manage the elevated intraocular pressure (IOP). Results This was a retrospective review of seven cases that received pars plana vitrectomy and SO with or without scleral buckling for different causes of retinal detachment (three were rhegmatogenous and four were tractional). After a period ranging from 1 week to 1 month, they presented with malignant glaucoma-like manifestations; high IOP, shallow axial anterior chamber, and remarkable decrease of visual acuity. Atropine eye drops and anti-glaucoma medical treatment (topical and systemic) had been tried but failed to improve the condition. Dramatic decrease of IOP and deepening of the axial anterior chamber was observed in all cases in the first postoperative day after phacoemulsification and posterior chamber foldable intraocular lens implantation with posterior capsulotomy. Conclusion Aqueous misdirection syndrome may be observed following pars plana vitrectomy and SO tamponade. This must be differentiated from other causes of post vitrectomy glaucoma. Cataract extraction with posterior capsulotomy controls the condition. PMID:26056429

  19. Radiological impact of Par Pond drawdown from liquid effluent pathways

    SciTech Connect

    Carlton, W.H.; Hamby, D.M.

    1991-10-25

    The water level of Par Pond has been lowered over the past several months to reduce the effects in the event of catastrophic dam failure while assessing the condition of the dam and determining if repairs are necessary. In lowering the level of Par Pond, 60 billion liters of water containing low levels of tritium and cesium-137 were discharged to several onsite streams. SRS surface streams flow to the Savannah River. An assessment made to determine the total amount of tritium and Cs-137 discharged and to estimate the consequences to downstream Savannah River users. It is estimated that a total of 160 curies of tritium were displaced from Par Pond to the Savannah River between June 28, 1991 and September 19, 1991. This release could hypothetically result in a maximum individual dose of 3. 2{times}10{sup {minus}4} mrem and a total (80-km and drinking water populations) population dose of 1.4{times}10{sup {minus}2} person-rem. Likewise, a maximum individual dose of 5.0{times}10{sup {minus}2} mrem and a total population dose of 1.7{times}10{sup {minus}1} person- rem are predicted as a result of an estimated 0.21 curies of Cs-137 being discharged from Par Pond to the Savannah River.

  20. BOREAS RSS-10 TOMS Circumpolar One-Degree PAR Images

    NASA Technical Reports Server (NTRS)

    Dye, Dennis G.; Holben, Brent; Nickeson, Jaime (Editor); Hall, Forrest G. (Editor); Smith, David E. (Technical Monitor)

    2000-01-01

    The Boreal Ecosystem-Atmosphere Study (BOREAS) Remote Sensing Science (RSS)-10 team investigated the magnitude of daily, seasonal, and yearly variations of Photosynthetically Active Radiation (PAR) from ground and satellite observations. This data set contains satellite estimates of surface-incident PAR (400-700 nm, MJ/sq m) at one-degree spatial resolution. The spatial coverage is circumpolar from latitudes of 41 to 66 degrees north. The temporal coverage is from May through September for years 1979 through 1989. Eleven-year statistics are also provided: (1) mean, (2) standard deviation, and (3) coefficient of variation for 1979-89. The PAR estimates were derived from the global gridded ultraviolet reflectivity data product (average of 360, 380 nm) from the Nimbus-7 Total Ozone Mapping Spectrometer (TOMS). Image mask data are provided for identifying the boreal forest zone, and ocean/land and snow/ice-covered areas. The data are available as binary image format data files. The PAR data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). The data files are available on a CD-ROM (see document number 20010000884).

  1. Competing ParA structures space bacterial plasmids equally over the nucleoid.

    PubMed

    Ietswaart, Robert; Szardenings, Florian; Gerdes, Kenn; Howard, Martin

    2014-12-01

    Low copy number plasmids in bacteria require segregation for stable inheritance through cell division. This is often achieved by a parABC locus, comprising an ATPase ParA, DNA-binding protein ParB and a parC region, encoding ParB-binding sites. These minimal components space plasmids equally over the nucleoid, yet the underlying mechanism is not understood. Here we investigate a model where ParA-ATP can dynamically associate to the nucleoid and is hydrolyzed by plasmid-associated ParB, thereby creating nucleoid-bound, self-organizing ParA concentration gradients. We show mathematically that differences between competing ParA concentrations on either side of a plasmid can specify regular plasmid positioning. Such positioning can be achieved regardless of the exact mechanism of plasmid movement, including plasmid diffusion with ParA-mediated immobilization or directed plasmid motion induced by ParB/parC-stimulated ParA structure disassembly. However, we find experimentally that parABC from Escherichia coli plasmid pB171 increases plasmid mobility, inconsistent with diffusion/immobilization. Instead our observations favor directed plasmid motion. Our model predicts less oscillatory ParA dynamics than previously believed, a prediction we verify experimentally. We also show that ParA localization and plasmid positioning depend on the underlying nucleoid morphology, indicating that the chromosomal architecture constrains ParA structure formation. Our directed motion model unifies previously contradictory models for plasmid segregation and provides a robust mechanistic basis for self-organized plasmid spacing that may be widely applicable.

  2. ParA-mediated plasmid partition driven by protein pattern self-organization

    PubMed Central

    Hwang, Ling Chin; Vecchiarelli, Anthony G; Han, Yong-Woon; Mizuuchi, Michiyo; Harada, Yoshie; Funnell, Barbara E; Mizuuchi, Kiyoshi

    2013-01-01

    DNA segregation ensures the stable inheritance of genetic material prior to cell division. Many bacterial chromosomes and low-copy plasmids, such as the plasmids P1 and F, employ a three-component system to partition replicated genomes: a partition site on the DNA target, typically called parS, a partition site binding protein, typically called ParB, and a Walker-type ATPase, typically called ParA, which also binds non-specific DNA. In vivo, the ParA family of ATPases forms dynamic patterns over the nucleoid, but how ATP-driven patterning is involved in partition is unknown. We reconstituted and visualized ParA-mediated plasmid partition inside a DNA-carpeted flowcell, which acts as an artificial nucleoid. ParA and ParB transiently bridged plasmid to the DNA carpet. ParB-stimulated ATP hydrolysis by ParA resulted in ParA disassembly from the bridging complex and from the surrounding DNA carpet, which led to plasmid detachment. Our results support a diffusion-ratchet model, where ParB on the plasmid chases and redistributes the ParA gradient on the nucleoid, which in turn mobilizes the plasmid. PMID:23443047

  3. PH motifs in PAR1&2 endow breast cancer growth.

    PubMed

    Kancharla, A; Maoz, M; Jaber, M; Agranovich, D; Peretz, T; Grisaru-Granovsky, S; Uziely, B; Bar-Shavit, R

    2015-01-01

    Although emerging roles of protease-activated receptor1&2 (PAR1&2) in cancer are recognized, their underlying signalling events are poorly understood. Here we show signal-binding motifs in PAR1&2 that are critical for breast cancer growth. This occurs via the association of the pleckstrin homology (PH) domain with Akt/PKB as a key signalling event of PARs. Other PH-domain signal-proteins such as Etk/Bmx and Vav3 also associate with PAR1 and PAR2 through their PH domains. PAR1 and PAR2 bind with priority to Etk/Bmx. A point mutation in PAR2, H349A, but not in R352A, abrogates PH-protein association and is sufficient to markedly reduce PAR2-instigated breast tumour growth in vivo and placental extravillous trophoblast (EVT) invasion in vitro. Similarly, the PAR1 mutant hPar1-7A, which is unable to bind the PH domain, reduces mammary tumours and EVT invasion, endowing these motifs with physiological significance and underscoring the importance of these previously unknown PAR1 and PAR2 PH-domain-binding motifs in both pathological and physiological invasion processes. PMID:26600192

  4. PH motifs in PAR1&2 endow breast cancer growth

    PubMed Central

    Kancharla, A.; Maoz, M.; Jaber, M.; Agranovich, D.; Peretz, T.; Grisaru-Granovsky, S.; Uziely, B.; Bar-Shavit, R.

    2015-01-01

    Although emerging roles of protease-activated receptor1&2 (PAR1&2) in cancer are recognized, their underlying signalling events are poorly understood. Here we show signal-binding motifs in PAR1&2 that are critical for breast cancer growth. This occurs via the association of the pleckstrin homology (PH) domain with Akt/PKB as a key signalling event of PARs. Other PH-domain signal-proteins such as Etk/Bmx and Vav3 also associate with PAR1 and PAR2 through their PH domains. PAR1 and PAR2 bind with priority to Etk/Bmx. A point mutation in PAR2, H349A, but not in R352A, abrogates PH-protein association and is sufficient to markedly reduce PAR2-instigated breast tumour growth in vivo and placental extravillous trophoblast (EVT) invasion in vitro. Similarly, the PAR1 mutant hPar1-7A, which is unable to bind the PH domain, reduces mammary tumours and EVT invasion, endowing these motifs with physiological significance and underscoring the importance of these previously unknown PAR1 and PAR2 PH-domain-binding motifs in both pathological and physiological invasion processes. PMID:26600192

  5. Diffraction Properties of a Volume Photorefractive Hologram.

    NASA Astrophysics Data System (ADS)

    Zhou, Hanying

    1995-01-01

    A number of topics related to the diffraction properties of a thick photorefractive hologram are investigated. First, a coupled-recording-wave approach is introduced to study the diffraction efficiency and the wavelength/angular selectivity of a reflective-type photorefractive volume hologram as affected by the coupling-erasure dynamics during recording. A closed-form expression for the diffraction efficiency is derived for the on-Bragg readout while a numerical analysis is performed for the off-Bragg readout. The erasure-limited storage capacity is analyzed. Second, intrasignal coupling effect is studied for photorefractive LiNbO_3 crystals. It is shown that the anisotropy nature of the effective electro -optic coefficient of this crystal results in an orientation -dependent intrasignal coupling, leading to a distorted image version inside the medium and hence affecting the fidelity of the reconstructed image. Analytical solutions for one-dimensional case are derived for two commonly used crystal orientations, which are shown having different characteristics. The maximum beam field angle or the maximum crystal thickness for a given intensity distortion due to the intrasignal coupling is estimated. Finally, the diffraction properties of a PR hologram as affected by the anisotropic nature of the refractive -index grating of a photorefractive crystal is investigated. The diffraction efficiency is shown to be angle dependent, which causes a nonuniform diffraction over the spatial frequency contents or pixel positions of a hologram image in a page-oriented holographic system. Its effects on the fidelity of the hologram image in terms of bit-error -rate (BER) and on the angular multiplexing scheme are discussed.

  6. Macromolecular diffractive imaging using imperfect crystals

    PubMed Central

    Ayyer, Kartik; Yefanov, Oleksandr; Oberthür, Dominik; Roy-Chowdhury, Shatabdi; Galli, Lorenzo; Mariani, Valerio; Basu, Shibom; Coe, Jesse; Conrad, Chelsie E.; Fromme, Raimund; Schaffer, Alexander; Dörner, Katerina; James, Daniel; Kupitz, Christopher; Metz, Markus; Nelson, Garrett; Lourdu Xavier, Paulraj; Beyerlein, Kenneth R.; Schmidt, Marius; Sarrou, Iosifina; Spence, John C. H.; Weierstall, Uwe; White, Thomas A.; Yang, Jay-How; Zhao, Yun; Liang, Mengning; Aquila, Andrew; Hunter, Mark S.; Robinson, Joseph S.; Koglin, Jason E.; Boutet, Sébastien; Fromme, Petra; Barty, Anton; Chapman, Henry N.

    2016-01-01

    The three-dimensional structures of macromolecules and their complexes are predominantly elucidated by X-ray protein crystallography. A major limitation is access to high-quality crystals, to ensure X-ray diffraction extends to sufficiently large scattering angles and hence yields sufficiently high-resolution information that the crystal structure can be solved. The observation that crystals with shrunken unit-cell volumes and tighter macromolecular packing often produce higher-resolution Bragg peaks1,2 hints that crystallographic resolution for some macromolecules may be limited not by their heterogeneity but rather by a deviation of strict positional ordering of the crystalline lattice. Such displacements of molecules from the ideal lattice give rise to a continuous diffraction pattern, equal to the incoherent sum of diffraction from rigid single molecular complexes aligned along several discrete crystallographic orientations and hence with an increased information content3. Although such continuous diffraction patterns have long been observed—and are of interest as a source of information about the dynamics of proteins4 —they have not been used for structure determination. Here we show for crystals of the integral membrane protein complex photosystem II that lattice disorder increases the information content and the resolution of the diffraction pattern well beyond the 4.5 Å limit of measurable Bragg peaks, which allows us to directly phase5 the pattern. With the molecular envelope conventionally determined at 4.5 Å as a constraint, we then obtain a static image of the photosystem II dimer at 3.5 Å resolution. This result shows that continuous diffraction can be used to overcome long-supposed resolution limits of macromolecular crystallography, with a method that puts great value in commonly encountered imperfect crystals and opens up the possibility for model-free phasing6,7. PMID:26863980

  7. Macromolecular diffractive imaging using imperfect crystals.

    PubMed

    Ayyer, Kartik; Yefanov, Oleksandr M; Oberthür, Dominik; Roy-Chowdhury, Shatabdi; Galli, Lorenzo; Mariani, Valerio; Basu, Shibom; Coe, Jesse; Conrad, Chelsie E; Fromme, Raimund; Schaffer, Alexander; Dörner, Katerina; James, Daniel; Kupitz, Christopher; Metz, Markus; Nelson, Garrett; Xavier, Paulraj Lourdu; Beyerlein, Kenneth R; Schmidt, Marius; Sarrou, Iosifina; Spence, John C H; Weierstall, Uwe; White, Thomas A; Yang, Jay-How; Zhao, Yun; Liang, Mengning; Aquila, Andrew; Hunter, Mark S; Robinson, Joseph S; Koglin, Jason E; Boutet, Sébastien; Fromme, Petra; Barty, Anton; Chapman, Henry N

    2016-02-11

    The three-dimensional structures of macromolecules and their complexes are mainly elucidated by X-ray protein crystallography. A major limitation of this method is access to high-quality crystals, which is necessary to ensure X-ray diffraction extends to sufficiently large scattering angles and hence yields information of sufficiently high resolution with which to solve the crystal structure. The observation that crystals with reduced unit-cell volumes and tighter macromolecular packing often produce higher-resolution Bragg peaks suggests that crystallographic resolution for some macromolecules may be limited not by their heterogeneity, but by a deviation of strict positional ordering of the crystalline lattice. Such displacements of molecules from the ideal lattice give rise to a continuous diffraction pattern that is equal to the incoherent sum of diffraction from rigid individual molecular complexes aligned along several discrete crystallographic orientations and that, consequently, contains more information than Bragg peaks alone. Although such continuous diffraction patterns have long been observed--and are of interest as a source of information about the dynamics of proteins--they have not been used for structure determination. Here we show for crystals of the integral membrane protein complex photosystem II that lattice disorder increases the information content and the resolution of the diffraction pattern well beyond the 4.5-ångström limit of measurable Bragg peaks, which allows us to phase the pattern directly. Using the molecular envelope conventionally determined at 4.5 ångströms as a constraint, we obtain a static image of the photosystem II dimer at a resolution of 3.5 ångströms. This result shows that continuous diffraction can be used to overcome what have long been supposed to be the resolution limits of macromolecular crystallography, using a method that exploits commonly encountered imperfect crystals and enables model-free phasing.

  8. Macromolecular diffractive imaging using imperfect crystals

    NASA Astrophysics Data System (ADS)

    Ayyer, Kartik; Yefanov, Oleksandr M.; Oberthür, Dominik; Roy-Chowdhury, Shatabdi; Galli, Lorenzo; Mariani, Valerio; Basu, Shibom; Coe, Jesse; Conrad, Chelsie E.; Fromme, Raimund; Schaffer, Alexander; Dörner, Katerina; James, Daniel; Kupitz, Christopher; Metz, Markus; Nelson, Garrett; Xavier, Paulraj Lourdu; Beyerlein, Kenneth R.; Schmidt, Marius; Sarrou, Iosifina; Spence, John C. H.; Weierstall, Uwe; White, Thomas A.; Yang, Jay-How; Zhao, Yun; Liang, Mengning; Aquila, Andrew; Hunter, Mark S.; Robinson, Joseph S.; Koglin, Jason E.; Boutet, Sébastien; Fromme, Petra; Barty, Anton; Chapman, Henry N.

    2016-02-01

    The three-dimensional structures of macromolecules and their complexes are mainly elucidated by X-ray protein crystallography. A major limitation of this method is access to high-quality crystals, which is necessary to ensure X-ray diffraction extends to sufficiently large scattering angles and hence yields information of sufficiently high resolution with which to solve the crystal structure. The observation that crystals with reduced unit-cell volumes and tighter macromolecular packing often produce higher-resolution Bragg peaks suggests that crystallographic resolution for some macromolecules may be limited not by their heterogeneity, but by a deviation of strict positional ordering of the crystalline lattice. Such displacements of molecules from the ideal lattice give rise to a continuous diffraction pattern that is equal to the incoherent sum of diffraction from rigid individual molecular complexes aligned along several discrete crystallographic orientations and that, consequently, contains more information than Bragg peaks alone. Although such continuous diffraction patterns have long been observed—and are of interest as a source of information about the dynamics of proteins—they have not been used for structure determination. Here we show for crystals of the integral membrane protein complex photosystem II that lattice disorder increases the information content and the resolution of the diffraction pattern well beyond the 4.5-ångström limit of measurable Bragg peaks, which allows us to phase the pattern directly. Using the molecular envelope conventionally determined at 4.5 ångströms as a constraint, we obtain a static image of the photosystem II dimer at a resolution of 3.5 ångströms. This result shows that continuous diffraction can be used to overcome what have long been supposed to be the resolution limits of macromolecular crystallography, using a method that exploits commonly encountered imperfect crystals and enables model-free phasing.

  9. Macromolecular diffractive imaging using imperfect crystals.

    PubMed

    Ayyer, Kartik; Yefanov, Oleksandr M; Oberthür, Dominik; Roy-Chowdhury, Shatabdi; Galli, Lorenzo; Mariani, Valerio; Basu, Shibom; Coe, Jesse; Conrad, Chelsie E; Fromme, Raimund; Schaffer, Alexander; Dörner, Katerina; James, Daniel; Kupitz, Christopher; Metz, Markus; Nelson, Garrett; Xavier, Paulraj Lourdu; Beyerlein, Kenneth R; Schmidt, Marius; Sarrou, Iosifina; Spence, John C H; Weierstall, Uwe; White, Thomas A; Yang, Jay-How; Zhao, Yun; Liang, Mengning; Aquila, Andrew; Hunter, Mark S; Robinson, Joseph S; Koglin, Jason E; Boutet, Sébastien; Fromme, Petra; Barty, Anton; Chapman, Henry N

    2016-02-11

    The three-dimensional structures of macromolecules and their complexes are mainly elucidated by X-ray protein crystallography. A major limitation of this method is access to high-quality crystals, which is necessary to ensure X-ray diffraction extends to sufficiently large scattering angles and hence yields information of sufficiently high resolution with which to solve the crystal structure. The observation that crystals with reduced unit-cell volumes and tighter macromolecular packing often produce higher-resolution Bragg peaks suggests that crystallographic resolution for some macromolecules may be limited not by their heterogeneity, but by a deviation of strict positional ordering of the crystalline lattice. Such displacements of molecules from the ideal lattice give rise to a continuous diffraction pattern that is equal to the incoherent sum of diffraction from rigid individual molecular complexes aligned along several discrete crystallographic orientations and that, consequently, contains more information than Bragg peaks alone. Although such continuous diffraction patterns have long been observed--and are of interest as a source of information about the dynamics of proteins--they have not been used for structure determination. Here we show for crystals of the integral membrane protein complex photosystem II that lattice disorder increases the information content and the resolution of the diffraction pattern well beyond the 4.5-ångström limit of measurable Bragg peaks, which allows us to phase the pattern directly. Using the molecular envelope conventionally determined at 4.5 ångströms as a constraint, we obtain a static image of the photosystem II dimer at a resolution of 3.5 ångströms. This result shows that continuous diffraction can be used to overcome what have long been supposed to be the resolution limits of macromolecular crystallography, using a method that exploits commonly encountered imperfect crystals and enables model-free phasing. PMID

  10. QCD subgroup on diffractive and forward physics

    SciTech Connect

    Albrow, M.G.; Baker, W.; Bhatti, A.

    1997-09-01

    Over the last few years, there has been a resurgence of interest in small-x or diffractive physics. This has been due to the realization that perturbative QCD techniques may be applicable to what was previously thought of as a non-perturbative problem and to the opening up of new energy regimes at HERA and the Tevatron collider. The goal is to understand the pomeron, and hence the behavior of total cross sections, elastic scattering and diffractive excitation, in terms of the underlying theory, QCD. This paper is divided into experiments of hadron-hadron colliders and electron-proton colliders.

  11. Fraunhofer diffraction by a random screen.

    PubMed

    Malinka, Aleksey V

    2011-08-01

    The stochastic approach is applied to the problem of Fraunhofer diffraction by a random screen. The diffraction pattern is expressed through the random chord distribution. Two cases are considered: the sparse ensemble, where the interference between different obstacles can be neglected, and the densely packed ensemble, where this interference is to be taken into account. The solution is found for the general case and the analytical formulas are obtained for the Switzer model of a random screen, i.e., for the case of Markov statistics.

  12. Coherent diffractive imaging of single layer microspheres

    SciTech Connect

    Dinh, Khuong Ba Le, Hoang Vu; Van Vuong, Cuong; Hannaford, Peter; Van Dao, Lap; Ong, Adabelle X. P.; Henderson, Clare A.; Smith, Trevor A.

    2015-04-28

    We report the extreme ultraviolet (XUV) coherent diffractive imaging of silica/polymer micro-particle samples illuminated by a table-top high harmonic generation source at the wavelength of 30 nm. We achieve images constructed from diffraction patterns acquired with 13 μm × 13 μm samples comprising a sparse monolayer of spherical silica and polymer micro-particles. Successful reconstructed image of an aperiodic sample using this HHG source will open the path to the realization of a compact soft x-ray microscope to investigate other complex absorbing samples.

  13. Single Particle X-ray Diffractive Imaging

    SciTech Connect

    Bogan, M J; Benner, W H; Boutet, S; Rohner, U; Frank, M; Seibert, M; Maia, F; Barty, A; Bajt, S; Riot, V; Woods, B; Marchesini, S; Hau-Riege, S P; Svenda, M; Marklund, E; Spiller, E; Hajdu, J; Chapman, H N

    2007-10-01

    In nanotechnology, strategies for the creation and manipulation of nanoparticles in the gas phase are critically important for surface modification and substrate-free characterization. Recent coherent diffractive imaging with intense femtosecond X-ray pulses has verified the capability of single-shot imaging of nanoscale objects at sub-optical resolutions beyond the radiation-induced damage threshold. By intercepting electrospray-generated particles with a single 15 femtosecond soft-X-ray pulse, we demonstrate diffractive imaging of a nanoscale specimen in free flight for the first time, an important step toward imaging uncrystallized biomolecules.

  14. Autoindexing diffraction images with iMosflm

    SciTech Connect

    Powell, Harold R.; Johnson, Owen; Leslie, Andrew G. W.

    2013-07-01

    The principles of one-dimensional FFT-based autoindexing of diffraction images are described together with practical issues that may arise. A procedure for indexing multiple lattices as implemented in iMosflm is presented. An overview of autoindexing diffraction images based on one-@@dimensional fast Fourier transforms is presented. The implementation of the algorithm in the Mosflm/iMosflm program suite is described with a discussion of practical issues that may arise and ways of assessing the success or failure of the procedure. Recent developments allow indexing of images that show multiple lattices, and several examples demonstrate the success of this approach in real cases.

  15. Wave diffraction by a cosmic string

    NASA Astrophysics Data System (ADS)

    Fernández-Núñez, Isabel; Bulashenko, Oleg

    2016-08-01

    We show that if a cosmic string exists, it may be identified through characteristic diffraction pattern in the energy spectrum of the observed signal. In particular, if the string is on the line of sight, the wave field is shown to fit the Cornu spiral. We suggest a simple procedure, based on Keller's geometrical theory of diffraction, which allows to explain wave effects in conical spacetime of a cosmic string in terms of interference of four characteristic rays. Our results are supposed to be valid for scalar massless waves, including gravitational waves, electromagnetic waves, or even sound in case of condensed matter systems with analogous topological defects.

  16. Anomalous Diffraction in Cold Magnetized Plasma.

    PubMed

    Abelson, Z; Gad, R; Bar-Ad, S; Fisher, A

    2015-10-01

    Cold magnetized plasma possesses an anisotropic permittivity tensor with a unique dispersion relation that for adequate electron density and magnetic field results in anomalous diffraction of a right-hand circularly polarized beam. In this work, we demonstrate experimentally anomalous diffraction of a microwave beam in plasma. Additionally, decreasing the electron density enables observation of the transition of the material from a hyperbolic to a standard material. Manipulation of the control parameters will enable plasma to serve as a reconfigurable metamaterial-like medium. PMID:26551813

  17. Diffraction by dual-period gratings.

    PubMed

    Skigin, Diana C; Depine, Ricardo A

    2007-03-20

    The dynamical characteristics of dual-period perfectly conducting gratings are explored. Gratings with several grooves (reflection) or slits (transmission) within each period are considered. A scalar approach is proposed to derive the general characteristics of the diffracted response. It was found that compound gratings can be designed to cancel as well as to intensify a given diffraction order. These preliminary estimations for finite gratings are validated by numerical examples for infinitely periodic reflection and transmission gratings with finite thickness, performed using an extension of the rigorous modal method to compound gratings, for both polarization cases.

  18. Spatiotemporal pulse shaping using resonant diffraction gratings.

    PubMed

    Golovastikov, Nikita V; Bykov, Dmitry A; Doskolovich, Leonid L

    2015-08-01

    We propose a new theoretical model describing spatiotemporal transformations of two-dimensional optical pulses by resonant diffraction gratings. The diffraction of the pulse is described in terms of a linear system. Simple analytical approximations for the transfer function and the impulse response of the system are derived. The derived approximations contain five independent parameters, which can be estimated using the rigorous coupled-wave analysis. The presented numerical simulation results demonstrate that the resonant grating can perform complex pulse transformations, such as the simultaneous spatial and temporal differentiation of the optical pulse envelope.

  19. Single particle X-ray diffractive imaging.

    PubMed

    Bogan, Michael J; Benner, W Henry; Boutet, Sébastien; Rohner, Urs; Frank, Matthias; Barty, Anton; Seibert, M Marvin; Maia, Filipe; Marchesini, Stefano; Bajt, Sasa; Woods, Bruce; Riot, Vincent; Hau-Riege, Stefan P; Svenda, Martin; Marklund, Erik; Spiller, Eberhard; Hajdu, Janos; Chapman, Henry N

    2008-01-01

    In nanotechnology, strategies for the creation and manipulation of nanoparticles in the gas phase are critically important for surface modification and substrate-free characterization. Recent coherent diffractive imaging with intense femtosecond X-ray pulses has verified the capability of single-shot imaging of nanoscale objects at suboptical resolutions beyond the radiation-induced damage threshold. By intercepting electrospray-generated particles with a single 15 femtosecond soft-X-ray pulse, we demonstrate diffractive imaging of a nanoscale specimen in free flight for the first time, an important step toward imaging uncrystallized biomolecules.

  20. Explanation and observability of diffraction in time

    SciTech Connect

    Torrontegui, E.; Muga, J. G.; Munoz, J.; Ban, Yue

    2011-04-15

    Diffraction in time (DIT) is a fundamental phenomenon in quantum dynamics due to time-dependent obstacles and slits. It is formally analogous to diffraction of light, and is expected to play an increasing role in the design of coherent matter wave sources, as in the atom laser, to analyze time-of-flight information and emission from ultrafast pulsed excitations, and in applications of coherent matter waves in integrated atom-optical circuits. We demonstrate that DIT emerges robustly in quantum waves emitted by an exponentially decaying source and provide a simple explanation of the phenomenon, as an interference of two characteristic velocities. This allows for its controllability and optimization.

  1. Diffraction efficiency sensitivity to oblique incident angle for multilayer diffractive optical elements.

    PubMed

    Yang, Hongfang; Xue, Changxi; Li, Chuang; Wang, Ju; Zhang, Ran

    2016-09-01

    The relationship between diffraction efficiency of multilayer diffractive optical elements (MLDOEs) and arbitrary incident angle was numerically analyzed with the effective area method. The method is based on the shield effect between two elements of MLDOEs; a generalized diffraction efficiency formulation was obtained in a wide range of tilt angles, which overcame the limitations of scalar diffraction theory when the period width of MLDOEs is taken into account. A detailed comparison of the proposed effective area method with the scalar diffraction theory is numerically presented for MLDOEs. The validity of the proposed method is verified by comparison with the rigorous electromagnetic analysis method, especially the finite-difference time-domain method. The analysis results show that the shield effect augments with the increase of the incident angles; the effect of incident angles on MLDOEs with finite period widths is more noticeable than that with large period widths. PMID:27607291

  2. Explication of diffraction lights on an optical imaging system from a Fraunhofer diffraction perspective

    NASA Astrophysics Data System (ADS)

    Ando, Takamasa; Korenaga, Tsuguhiro; Suzuki, Masa-aki

    2012-06-01

    Low-height camera modules are demanded for such applications as cellular phones and vehicles. For designing optical lens, it has widely been recognized that a trade-off exists between reducing the number of lenses and camera resolution. The optical performance of imaging lenses has been improved by diffraction gratings, which have a peculiar inverse dispersion in the wavelength and exhibit the efficacy of correction for chromatic aberration. We can simultaneously reduce the number of lenses and maintain optical resolution using diffraction gratings. However, we have found a generation of striped flare lights under intense light sources that differ from unnecessary order diffraction lights. In this paper, we reveal the generation mechanism of these new striped diffraction lights and suggest a novel structure of diffraction gratings that can decrease them.

  3. Results of peripheral laser photocoagulation in pars planitis.

    PubMed Central

    Pulido, J S; Mieler, W F; Walton, D; Kuhn, E; Postel, E; Hartz, A; Jampol, L M; Weinberg, D V; Logani, S

    1998-01-01

    PURPOSE: To determine the effect of peripheral retinal laser photocoagulation (PLP) on visual acuity, intraocular inflammation, and other ocular findings, including retinal neovascularization in eyes with pars planitis. METHODS: A retrospective chart review of eyes with pars planitis that had undergone PLP. RESULTS: Twenty-two eyes in 17 patients with pars planitis had undergone treatment with PLP at 2 centers. The mean age at the time of treatment was 19.3 years. Following treatment, mean follow-up was 16.3 months (range, 6 to 37 months). Mean visual acuity was 20/60 preoperatively and 20/50 postoperatively. This level of improvement was not statistically significant (P > .10), but there was a statistically significant decrease in the use of corticosteroids between the preoperative examination and the last postoperative examination (86% versus 27%, P < .05). There was also a statistically significant decrease in vitritis at the last follow-up (P = .0008) and a decrease in neovascularization of the vitreous base (P = .03) and in clinically apparent cystoid macular edema (P = .02). Epiretinal membranes were noted in 23% of eyes preoperatively and in 45% of eyes postoperatively. Only one of these epiretinal membranes was considered to be visually significant. One eye developed a tonic dilated pupil, which slowly improved. CONCLUSIONS: Although the long-term natural history of clinical findings in pars planitis is not well documented, PLP appears to decrease the need for corticosteroids while stabilizing visual acuity. It also appears to decrease vitreous inflammation. PLP has few complications and should be considered in patients with pars planitis who are unresponsive or have adverse reactions to corticosteroids. PMID:10360286

  4. The role of pars flaccida in human middle ear sound transmission.

    PubMed

    Aritomo, H; Goode, R L; Gonzalez, J

    1988-04-01

    The role of the pars flaccida in middle ear sound transmission was studied with the use of twelve otoscopically normal, fresh, human temporal bones. Peak-to-peak umbo displacement in response to a constant sound pressure level at the tympanic membrane was measured with a noncontacting video measuring system capable of repeatable measurements down to 0.2 micron. Measurements were made before and after pars flaccida modifications at 18 frequencies between 100 and 4000 Hz. Four pars flaccida modifications were studied: (1) acoustic insulation of the pars flaccida to the ear canal with a silicone rubber baffle, (2) stiffening the pars flaccida with cyanoacrylate cement, (3) decreasing the tension of the pars flaccida with a nonperforating incision, and (4) perforation of the pars flaccida. All of the modifications (except the perforation) had a minimal effect on umbo displacement; this seems to imply that the pars flaccida has a minor acoustic role in human beings. PMID:3132684

  5. Diffraction from nonperiodic models of cellulose crystals

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Powder and fiber diffraction patterns were calculated for model cellulose crystallites with chains 20 glucose units long. Model sizes ranged from four chains to 169 chains, based on cellulose I' coordinates, and were subjected to various combinations of energy minimization and molecular dynamics (M...

  6. Idealized powder diffraction patterns for cellulose polymorphs

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cellulose samples are routinely analyzed by X-ray diffraction to determine their crystal type (polymorph) and crystallinity. However, the connection is seldom made between those efforts and the crystal structures of cellulose that have been determined with synchrotron X-radiation and neutron diffrac...

  7. Diffraction from fractal grating Cantor sets

    NASA Astrophysics Data System (ADS)

    Golmankhaneh, Alireza K.; Baleanu, D.

    2016-08-01

    In this paper, we have generalized the Fα-calculus by suggesting Fourier and Laplace transformations of the function with support of the fractals set which are the subset of the real line. Using this generalization, we have found the diffraction fringes from the fractal grating Cantor sets.

  8. X-ray dynamical diffraction Fraunhofer holography.

    PubMed

    Balyan, Minas

    2013-09-01

    An X-ray dynamical diffraction Fraunhofer holographic scheme is proposed. Theoretically it is shown that the reconstruction of the object image by visible light is possible. The spatial and temporal coherence requirements of the incident X-ray beam are considered. As an example, the hologram recording as well as the reconstruction by visible light of an absolutely absorbing wire are discussed.

  9. Diffractive Higgs boson production at LHC

    SciTech Connect

    Tasevsky, Marek

    2006-04-11

    The exclusive double Pomeron exchange production of Higgs boson in diffraction is briefly discussed. Three dedicated Monte Carlo event generators are described and their predictions compared. Two decay channels, namely H {yields} bb-bar and H {yields} W+W-, are discussed in detail.

  10. Diffraction with CDF II at the Tevatron

    SciTech Connect

    Goulianos, Konstantin

    2009-03-23

    Results on diffraction from the Fermilab Tevatron collider obtained by the CDF II Collaboration using data from pp-bar collisions at {radical}(s) = 1.96 TeV are reviewed and compared with theoretical expectations. Implications for predictions of exclusive Higgs boson production rates at the Large Hadron Collider are discussed.

  11. Sub-diffraction limit resolution in microscopy

    NASA Technical Reports Server (NTRS)

    Cheng, Ming (Inventor); Chen, Weinong (Inventor)

    2007-01-01

    A method and apparatus for visualizing sub-micron size particles employs a polarizing microscope wherein a focused beam of polarized light is projected onto a target, and a portion of the illuminating light is blocked from reaching the specimen, whereby to produce a shadow region, and projecting diffracted light from the target onto the shadow region.

  12. Diffraction Anomalous Near-Edge Structure

    NASA Astrophysics Data System (ADS)

    Moltaji, Habib O., Jr.

    1995-11-01

    To determine the atomic structure about atom of an element in a sample of a condensed multicomponent single crystal, contrast radiation is proposed with the use of Diffraction Anomalous Near-Edge Structure (DANES), which combines the long-range order sensitivity of the x-ray diffraction and short-range order of the x-ray absorption near-edge techniques. This is achieved by modulating the photon energy of the x-ray beam incident on the sample over a range of energies near an absorption edge of the selected element. Due to anomalous dispersion, x-ray diffraction, and x-ray absorption, the DANES intensity with respect to the selected element is obtained in a single experiment. I demonstrate that synchrotron DANES measurements for the single crystal of thin film and the powder samples and provide the same local atomic structural information as the x-ray absorption near-edge with diffraction condition and can be used to provide enhanced site selectivity. I demonstrate calculations of DAFS intensity and measurements of polarized DANES and XANES intensity.

  13. Diffraction Techniques for Nonlamellar Phases of Phospholipids

    SciTech Connect

    Ding,L.; Liu, W.; Wang, W.; Glinka, C.; Worchester, D.; Yang, L.; Huang, H.

    2004-01-01

    A neutron diffraction method applicable to nonlamellar phases of substrate-supported lipid membranes is described and validated. When prepared on a flat substrate, the resulting nonlamellar phases have layered symmetry which provides some advantages over powder diffraction for detailed structure determination. This approach recently led to the detection of a rhombohedral phase and a distorted hexagonal phase of lipids. Here the determination of intensity and phase information for such phases is demonstrated by application to the hexagonal phase of diphytanoyl phosphatidylcholine (DPhPC). The hexagonal symmetry is used to verify the data reduction procedure for the intensities of the diffraction peaks. Diffraction intensities measured while varying the D2O/H2O ratio in the relative humidity was used to solve the phase problem. The neutron scattering length density distribution of the hexagonal phase was constructed and analyzed to elucidate the packing of the lipid molecules. The structure of DPhPC in the hexagonal phase is of interest in connection with its stalk structure in the rhombohedral phase. We also found that the incorporation of tetradecane into the DPhPC hexagonal phase is limited, similar to the case for dioleoyl phosphatidylethanolamine.

  14. X-Ray Diffraction on NIF

    SciTech Connect

    Eggert, J H; Wark, J

    2012-02-15

    The National Ignition Facility (NIF) is currently a 192 beam, 1.6 MJ laser. NIF Ramp-Compression Experiments have already made the relevant exo-planet pressure range from 1 to 50 Mbar accessible. We Proposed to Study Carbon Phases by X-Ray Diffraction on NIF. Just a few years ago, ultra-high pressure phase diagrams for materials were very 'simple'. New experiments and theories point out surprising and decidedly complex behavior at the highest pressures considered. High pressures phases of aluminum are also predicted to be complex. Recent metadynamics survey of carbon proposed a dynamic pathway among multiple phases. We need to develop diagnostics and techniques to explore this new regime of highly compressed matter science. X-Ray Diffraction - Understand the phase diagram/EOS/strength/texture of materials to 10's of Mbar. Strategy and physics goals: (1) Powder diffraction; (2) Begin with diamond; (3) Continue with metals etc.; (4) Explore phase diagrams; (5) Develop liquid diffraction; and (6) Reduce background/improve resolution.

  15. Single Hit Energy-resolved Laue Diffraction.

    PubMed

    Patel, Shamim; Suggit, Matthew J; Stubley, Paul G; Hawreliak, James A; Ciricosta, Orlando; Comley, Andrew J; Collins, Gilbert W; Eggert, Jon H; Foster, John M; Wark, Justin S; Higginbotham, Andrew

    2015-05-01

    In situ white light Laue diffraction has been successfully used to interrogate the structure of single crystal materials undergoing rapid (nanosecond) dynamic compression up to megabar pressures. However, information on strain state accessible via this technique is limited, reducing its applicability for a range of applications. We present an extension to the existing Laue diffraction platform in which we record the photon energy of a subset of diffraction peaks. This allows for a measurement of the longitudinal and transverse strains in situ during compression. Consequently, we demonstrate measurement of volumetric compression of the unit cell, in addition to the limited aspect ratio information accessible in conventional white light Laue. We present preliminary results for silicon, where only an elastic strain is observed. VISAR measurements show the presence of a two wave structure and measurements show that material downstream of the second wave does not contribute to the observed diffraction peaks, supporting the idea that this material may be highly disordered, or has undergone large scale rotation.

  16. Programmable diffractive lens for ophthalmic application

    NASA Astrophysics Data System (ADS)

    Millán, María S.; Pérez-Cabré, Elisabet; Romero, Lenny A.; Ramírez, Natalia

    2014-06-01

    Pixelated liquid crystal displays have been widely used as spatial light modulators to implement programmable diffractive optical elements, particularly diffractive lenses. Many different applications of such components have been developed in information optics and optical processors that take advantage of their properties of great flexibility, easy and fast refreshment, and multiplexing capability in comparison with equivalent conventional refractive lenses. We explore the application of programmable diffractive lenses displayed on the pixelated screen of a liquid crystal on silicon spatial light modulator to ophthalmic optics. In particular, we consider the use of programmable diffractive lenses for the visual compensation of refractive errors (myopia, hypermetropia, astigmatism) and presbyopia. The principles of compensation are described and sketched using geometrical optics and paraxial ray tracing. For the proof of concept, a series of experiments with artificial eye in optical bench are conducted. We analyze the compensation precision in terms of optical power and compare the results with those obtained by means of conventional ophthalmic lenses. Practical considerations oriented to feasible applications are provided.

  17. Single Hit Energy-resolved Laue Diffraction

    SciTech Connect

    Patel, Shamim; Suggit, Matthew J.; Stubley, Paul G.; Ciricosta, Orlando; Wark, Justin S.; Higginbotham, Andrew; Hawreliak, James A.; Collins, Gilbert W.; Eggert, Jon H.; Comley, Andrew J.; Foster, John M.

    2015-05-15

    In situ white light Laue diffraction has been successfully used to interrogate the structure of single crystal materials undergoing rapid (nanosecond) dynamic compression up to megabar pressures. However, information on strain state accessible via this technique is limited, reducing its applicability for a range of applications. We present an extension to the existing Laue diffraction platform in which we record the photon energy of a subset of diffraction peaks. This allows for a measurement of the longitudinal and transverse strains in situ during compression. Consequently, we demonstrate measurement of volumetric compression of the unit cell, in addition to the limited aspect ratio information accessible in conventional white light Laue. We present preliminary results for silicon, where only an elastic strain is observed. VISAR measurements show the presence of a two wave structure and measurements show that material downstream of the second wave does not contribute to the observed diffraction peaks, supporting the idea that this material may be highly disordered, or has undergone large scale rotation.

  18. The Dynamical Theory of X Ray Diffraction

    ERIC Educational Resources Information Center

    Balchin, A. A.; Whitehouse, C. R.

    1974-01-01

    Summarizes the Darwin theory of x-ray diffraction in thin crystals or crystals with a mosaic texture and its modified application to crystals with three-dimensional electrostatic dipoles. Indicates that the dynamical theory is brought into its present relevance by the improvement of single crystal growth techniques. (CC)

  19. Diffractive Pedagogies: Dancing across New Materialist Imaginaries

    ERIC Educational Resources Information Center

    Hickey-Moody, Anna; Palmer, Helen; Sayers, Esther

    2016-01-01

    We theorise an interdisciplinary arts practice university course and consider the forms of educational imaginary challenged by our curriculum. We argue for the disruptive and generative potential of what we call diffractive pedagogy as an example of the type of learning that can take place when materiality and entanglement are considered as vital…

  20. Transmissive Diffractive Optical Element Solar Concentrators

    NASA Technical Reports Server (NTRS)

    Baron, Richard; Moynihan, Philip; Price, Douglas

    2008-01-01

    Solar-thermal-radiation concentrators in the form of transmissive diffractive optical elements (DOEs) have been proposed as alternatives to mirror-type solar concentrators now in use. In comparison with functionally equivalent mirror-type solar concentrators, the transmissive, diffractive solar concentrators would weigh and cost less, and would be subject to relaxed mechanical tolerances. A DOE concentrator would be made from a thin, flat disk or membrane of a transmissive material having a suitable index of refraction. By virtue of its thinness, the DOE concentrator would have an areal mass density significantly less than that of a functionally equivalent conventional mirror. The DOE concentrator would have a relatively wide aperture--characterized by a focal-length/aperture-diameter ratio ('f number') on the order of 1. A kinoform (a surface-relief phase hologram) of high diffractive order would be microfabricated onto one face of the disk. The kinoform (see figure) would be designed to both diffract and refract incident solar radiation onto a desired focal region, without concern for forming an image of the Sun. The high diffractive order of this kinoform (in contradistinction to the low diffractive orders of some other kinoforms) would be necessary to obtain the desired f number of 1, which, in turn, would be necessary for obtaining a desired concentration ratio of 2,500 or greater. The design process of optimizing the concentration ratio of a proposed DOE solar concentrator includes computing convolutions of the optical bandwidth of the Sun with the optical transmission of the diffractive medium. Because, as in the cases of other non-imaging, light-concentrating optics, image quality is not a design requirement, the process also includes trading image quality against concentration ratio. A baseline design for one example calls for an aperture diameter of 1 m. This baseline design would be scalable to a diameter as large as 10 m, or to a smaller diameter for a

  1. Ultrafast Coherent Diffractive Imaging at FLASH

    SciTech Connect

    Chapman, H N

    2006-11-29

    Using the FLASH facility we have demonstrated high-resolution coherent diffractive imaging with single soft-X-ray free-electron laser pulses [1]. The intense focused FEL pulse gives a high resolution low-noise coherent diffraction pattern of an object before that object turns into a plasma and explodes. Our experiments are an important milestone in the development of single-particle diffractive imaging with future X-ray free-electron lasers [2, 3]. Our apparatus provides a new and unique tool at FLASH to perform imaging of biological specimens beyond conventional radiation damage resolution limits [2, 4] and to acquire images of ultrafast processes initiated by an FEL pulse or other laser pulse. Coherent diffractive imaging is an ideal method for high-resolution ultrafast imaging with an FEL. Since no optical element is required, the method can in principle be scaled to atomic resolution with short enough wavelength. Spatial and temporal coherence are necessary to ensure that the scattered light waves from all positions across the sample are correlated when they interfere at the detector, giving rise to a coherent diffraction pattern that can be phased and inverted to give a high-resolution image of the sample. In contrast to crystals, where scattering from the many unit cells constructively interfere to give Bragg spots, the coherent diffraction pattern of a non-periodic object is continuous. Such a coherent diffraction pattern contains as much as twice the information content of the pattern of its crystallized periodic counterpart--exactly the amount of information needed to solve the phase problem and deterministically invert the pattern to yield an image of the object [5, 6]. The computer algorithm that performs this function replaces the analogue computations of a lens: summing the complex-valued amplitudes of scattered waves to form an image at a particular plane. Our experimental geometry is shown in Fig. 1. We focus a coherent X-ray pulse from the FLASH

  2. Diffractive interference optical analyzer (DiOPTER)

    NASA Astrophysics Data System (ADS)

    Sasikumar, Harish; Prasad, Vishnu; Pal, Parama; Varma, Manoj M.

    2016-03-01

    This report demonstrates a method for high-resolution refractometric measurements using, what we have termed as, a Diffractive Interference Optical Analyzer (DiOpter). The setup consists of a laser, polarizer, a transparent diffraction grating and Si-photodetectors. The sensor is based on the differential response of diffracted orders to bulk refractive index changes. In these setups, the differential read-out of the diffracted orders suppresses signal drifts and enables time-resolved determination of refractive index changes in the sample cell. A remarkable feature of this device is that under appropriate conditions, the measurement sensitivity of the sensor can be enhanced by more than two orders of magnitude due to interference between multiply reflected diffracted orders. A noise-equivalent limit of detection (LoD) of 6x10-7 RIU was achieved in glass. This work focuses on devices with integrated sample well, made on low-cost PDMS. As the detection methodology is experimentally straightforward, it can be used across a wide array of applications, ranging from detecting changes in surface adsorbates via binding reactions to estimating refractive index (and hence concentration) variations in bulk samples. An exciting prospect of this technique is the potential integration of this device to smartphones using a simple interface based on transmission mode configuration. In a transmission configuration, we were able to achieve an LoD of 4x10-4 RIU which is sufficient to explore several applications in food quality testing and related fields. We are envisioning the future of this platform as a personal handheld optical analyzer for applications ranging from environmental sensing to healthcare and quality testing of food products.

  3. Diffractive limit approach to elastic scattering and inelastic diffraction of high-energy hadrons

    NASA Astrophysics Data System (ADS)

    Małecki, Andrzej

    1996-09-01

    An approach to inelastic diffraction based on the concept of equivalence of diffractive states is developed. In the classical description of Good and Walker, the inelastic diffraction originates from the diversity of elastic scattering amplitudes in the initial and final state Δt. We consider a multichannel correction, accounting for intermediate transitions inside the equivalence class. This correction can be factorized yielding the diffraction amplitude in the form NΔt, to be taken in the ``diffractive limit'' N-->∞, Δt-->0 such that NΔt is finite. We analyze elastic scattering and the inclusive inelastic diffraction cross sections for p-p and p-p>¯ collisions, in the range of c.m. energy √s=20-1800 GeV. We claim that the angular distribution of the inclusive inelastic diffraction at small momentum transfers is determined by elastic scattering in the transition region between the forward peak and the minimum. This is successfully verified in experiment. The detailed comparison with the Good-Walker description, with emphasis on the advantages of our approach, is presented.

  4. Phase-shifting point diffraction interferometer phase grating designs

    DOEpatents

    Naulleau, Patrick

    2001-01-01

    Diffraction phase gratings are employed in phase-shifting point diffraction interferometers to improve the interferometric fringe contrast. The diffraction phase grating diffracts a zeroth-order diffraction of light at a first power level to the test-beam window of a mask that is positioned at the image plane and a first-order diffraction at a second power to the reference-beam pinhole. The diffraction phase grating is preferably selected to yield a desired ratio of the first power level to second power level.

  5. Anisotropic diffraction of bulk acoustic wave beams in lithium niobate.

    PubMed

    Naumenko, Natalya F; Chizhikov, Sergey I; Molchanov, Vladimir Ya; Yushkov, Konstantin B

    2015-12-01

    The formalism of planar diffraction tensor was applied to the analysis of anisotropy of bulk acoustic wave diffraction and to build a full map of anisotropic diffractional coefficients for three bulk acoustic wave modes propagating in lithium niobate. For arbitrary propagation direction the diffractional coefficients derived allow estimation of ultrasonic beam divergence in far-field. Analysis of obtained data revealed that the maxima of acousto-optic figure of merit for anisotropic diffraction in the YZ plane correspond to moderate diffractional spreading of the beams exceeding isotropic diffraction 2-3 times. PMID:26150402

  6. Diffraction grating eigenvector for translational and rotational motion.

    PubMed

    Rushford, Michael C; Molander, William A; Nissen, James D; Jovanovic, Igor; Britten, Jerald A; Barty, C P J

    2006-01-15

    Future energy scaling of high-energy chirped-pulse amplification systems will benefit from the capability to coherently tile diffraction gratings into larger apertures. Design and operation of a novel, accurate alignment diagnostic for coherently tiled diffraction gratings is required for successful implementation of this technique. An invariant diffraction direction and phase for special moves of a diffraction grating is discussed, allowing simplification in the design of the coherently tiled grating diagnostic. An analytical proof of the existence of a unique diffraction grating eigenvector for translational and rotational motion that conserves the diffraction direction and diffracted wave phase is presented.

  7. Is There an "F" in Your PAR? Understanding, Teaching and Doing Action Research

    ERIC Educational Resources Information Center

    Lorenzetti, Liza; Walsh, Christine Ann

    2014-01-01

    Participatory Action Research (PAR) is increasingly recognized within academic research and pedagogy. What are the benefits of including feminism within participatory action research and teaching? In responding to this question, we discuss the similarities and salient differences between PAR and feminist informed PAR (FPAR). There are eight themes…

  8. ParA resolvase catalyzes site-specific excision of DNA from the Arabidopsis genome

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The small serine resolvase ParA from bacterial plasmids RK2 and RP4 catalyzes the recombination of two identical 133 bp recombination sites known as MRS. Previously, we reported that ParA is active in the fission yeast Schizosaccharomyces pombe. In this work, the parA recombinase gene was placed un...

  9. The Role of Prostate Apoptosis Response-4 (Par-4) in Mycobacterium tuberculosis Infected Macrophages

    PubMed Central

    Han, Ji-Ye; Lim, Yun-Ji; Choi, Ji-Ae; Lee, Jung-hwan; Jo, Sung-Hee; Oh, Sung-Man; Song, Chang-Hwa

    2016-01-01

    Prostate apoptosis response-4 (Par-4) is a tumor suppressor protein that forms a complex with glucose-regulated protein 78 (GRP78) to induce apoptosis. Previously, we reported that ER stress-induced apoptosis is a critical host defense mechanism against Mycobacterium tuberculosis (Mtb). We sought to understand the role of Par-4 during ER stress-induced apoptosis in response to mycobacterial infection. Par-4 and GRP78 protein levels increased in response Mtb (strain: H37Ra) infection. Furthermore, Par-4 and GRP78 translocate to the surface of Mtb H37Ra-infected macrophages and induce apoptosis via caspase activation. NF-κB activation, Mtb-mediated ER stress, and Par-4 production were significantly diminished in macrophages with inhibited ROS production. To test Par-4 function during mycobacterial infection, we analyzed intracellular survival of Mtb H37Ra in macrophages with Par-4 overexpression or knockdown. Mtb H37Ra growth was significantly reduced in Par-4 overexpressing macrophages and increased in knockdown macrophages. We also observed increased Par-4, GRP78, and caspases activation in Bacillus Calmette-Guérin (BCG)-infected prostate cancer cells. Our data demonstrate that Par-4 is associated with ER stress-induced apoptosis resulting in reduced intracellular survival of mycobacteria. BCG treatment increases Par-4-dependent caspase activation in prostate cancer cells. These results suggest ER stress-induced Par-4 acts as an important defense mechanism against mycobacterial infection and regulates cancer. PMID:27552917

  10. Alternative 3' UTR selection controls PAR-5 homeostasis and cell polarity in C. elegans embryos.

    PubMed

    Mikl, Martin; Cowan, Carrie R

    2014-09-11

    Cell polarity in one-cell C. elegans embryos guides asymmetric cell division and cell-fate specification. Shortly after fertilization, embryos establish two antagonistic cortical domains of PAR proteins. Here, we find that the conserved polarity factor PAR-5 regulates PAR domain size in a dose-dependent manner. Using quantitative imaging and controlled genetic manipulation, we find that PAR-5 protein levels reflect the cumulative output of three mRNA isoforms with different translational efficiencies mediated by their 3' UTRs. 3' UTR selection is regulated, influencing PAR-5 protein abundance. Alternative splicing underlies the selection of par-5 3' UTR isoforms. 3' UTR splicing is enhanced by the SR protein kinase SPK-1, and accordingly, SPK-1 is required for wild-type PAR-5 levels and PAR domain size. Precise regulation of par-5 isoform selection is essential for polarization when the posterior PAR network is compromised. Together, strict control of PAR-5 protein levels and feedback from polarity to par-5 3' UTR selection confer robustness to embryo polarization. PMID:25199833

  11. Biased signalling and proteinase-activated receptors (PARs): targeting inflammatory disease.

    PubMed

    Hollenberg, M D; Mihara, K; Polley, D; Suen, J Y; Han, A; Fairlie, D P; Ramachandran, R

    2014-03-01

    Although it has been known since the 1960s that trypsin and chymotrypsin can mimic hormone action in tissues, it took until the 1990s to discover that serine proteinases can regulate cells by cleaving and activating a unique four-member family of GPCRs known as proteinase-activated receptors (PARs). PAR activation involves the proteolytic exposure of its N-terminal receptor sequence that folds back to function as a 'tethered' receptor-activating ligand (TL). A key N-terminal arginine in each of PARs 1 to 4 has been singled out as a target for cleavage by thrombin (PARs 1, 3 and 4), trypsin (PARs 2 and 4) or other proteases to unmask the TL that activates signalling via Gq , Gi or G12 /13 . Similarly, synthetic receptor-activating peptides, corresponding to the exposed 'TL sequences' (e.g. SFLLRN-, for PAR1 or SLIGRL- for PAR2) can, like proteinase activation, also drive signalling via Gq , Gi and G12 /13 , without requiring receptor cleavage. Recent data show, however, that distinct proteinase-revealed 'non-canonical' PAR tethered-ligand sequences and PAR-activating agonist and antagonist peptide analogues can induce 'biased' PAR signalling, for example, via G12 /13 -MAPKinase instead of Gq -calcium. This overview summarizes implications of this 'biased' signalling by PAR agonists and antagonists for the recognized roles the PARs play in inflammatory settings. PMID:24354792

  12. Independent Confirmation of the MODIS LAI/fPAR Algorithm

    NASA Astrophysics Data System (ADS)

    Ganapol, B. D.; Dungan, J. L.

    2001-12-01

    The Leaf Canopy Model (LCM)-2 is a nested model that combines leaf radiative transfer with a full canopy reflectance model through the phase function (Ganapol et al. 1999). The basic components of the model include inversion for a leaf scattering coefficient, construction of a representative absorption coefficient and the determination of canopy reflectance given leaf area index (LAI) values and information on canopy type and structure. It can also be used to calculate the fraction of absorbed photosynthetically active radiation (fPAR) for the canopy. It therefore serves as an independent means of confirming the results of the MOD15 algorithm (Knyazikhin et al. 1998) that produces LAI and fPAR fields from reflectance measured by the Moderate Resolution Imaging Spectrometer (MODIS). In LCM2, relatively simple first principles of radiative transfer are used whereas in the MOD15 algorithm, scene variability is accounted for by specifying distributions and a response surface in a table-lookup procedure. The distributions are generated by various radiative transfer models with a host of underlying assumptions. The attempt to compare results from these two models is a useful means of addressing the structural uncertainty in the Earth Observing System prediction problem. We compared LCM2 results with those from the MOD15 algorithm for fPAR calculation. 100 pixels for an EOS Core Validation Site where there were coincident reflectance, vegetation index, fPAR and LAI products were chosen. The 8-day 500 m reflectance product was spatially degraded to coincide with 8-day 1 km LAI and fPAR products and LAI and land cover products were used to parameterize LCM2. Most fPAR results agreed to within 10 percent, though a bias was observed. Poor agreement was seen with vegetation index products. Ganapol, B.D., L.F. Johnson, C.A. Hlavka, D.L. Peterson, and B. Bond, LCM2: A coupled leaf/canopy radiative transfer model, Remote Sensing of Environment, 70:153-166, 1999. Knyazikhin, Y., J

  13. ParCAT: A Parallel Climate Analysis Toolkit

    NASA Astrophysics Data System (ADS)

    Haugen, B.; Smith, B.; Steed, C.; Ricciuto, D. M.; Thornton, P. E.; Shipman, G.

    2012-12-01

    Climate science has employed increasingly complex models and simulations to analyze the past and predict the future of our climate. The size and dimensionality of climate simulation data has been growing with the complexity of the models. This growth in data is creating a widening gap between the data being produced and the tools necessary to analyze large, high dimensional data sets. With single run data sets increasing into 10's, 100's and even 1000's of gigabytes, parallel computing tools are becoming a necessity in order to analyze and compare climate simulation data. The Parallel Climate Analysis Toolkit (ParCAT) provides basic tools that efficiently use parallel computing techniques to narrow the gap between data set size and analysis tools. ParCAT was created as a collaborative effort between climate scientists and computer scientists in order to provide efficient parallel implementations of the computing tools that are of use to climate scientists. Some of the basic functionalities included in the toolkit are the ability to compute spatio-temporal means and variances, differences between two runs and histograms of the values in a data set. ParCAT is designed to facilitate the "heavy lifting" that is required for large, multidimensional data sets. The toolkit does not focus on performing the final visualizations and presentation of results but rather, reducing large data sets to smaller, more manageable summaries. The output from ParCAT is provided in commonly used file formats (NetCDF, CSV, ASCII) to allow for simple integration with other tools. The toolkit is currently implemented as a command line utility, but will likely also provide a C library for developers interested in tighter software integration. Elements of the toolkit are already being incorporated into projects such as UV-CDAT and CMDX. There is also an effort underway to implement portions of the CCSM Land Model Diagnostics package using ParCAT in conjunction with Python and gnuplot. Par

  14. Diffraction by an arbitrary subreflector - GTD solution. [Geometrical Theory of Diffraction

    NASA Technical Reports Server (NTRS)

    Lee, S.-W.; Cramer, P., Jr.; Woo, K.; Rahmat-Samii, Y.

    1979-01-01

    The high-frequency asymptotic solution of diffraction by a conducting subreflector is investigated. The scattered field is determined up to and including terms of order k to the -1/2 relative to the incident field by using Keller's geometrical theory of diffraction and the newly developed uniform asymptotic theory of diffraction. The key feature of this approach is that the surface of the subreflector is completely arbitrary; in fact, it is only necessary to specify the surface at a set of discrete points over a random net.

  15. When holography meets coherent diffraction imaging.

    PubMed

    Latychevskaia, Tatiana; Longchamp, Jean-Nicolas; Fink, Hans-Werner

    2012-12-17

    The phase problem is inherent to crystallographic, astronomical and optical imaging where only the intensity of the scattered signal is detected and the phase information is lost and must somehow be recovered to reconstruct the object's structure. Modern imaging techniques at the molecular scale rely on utilizing novel coherent light sources like X-ray free electron lasers for the ultimate goal of visualizing such objects as individual biomolecules rather than crystals. Here, unlike in the case of crystals where structures can be solved by model building and phase refinement, the phase distribution of the wave scattered by an individual molecule must directly be recovered. There are two well-known solutions to the phase problem: holography and coherent diffraction imaging (CDI). Both techniques have their pros and cons. In holography, the reconstruction of the scattered complex-valued object wave is directly provided by a well-defined reference wave that must cover the entire detector area which often is an experimental challenge. CDI provides the highest possible, only wavelength limited, resolution, but the phase recovery is an iterative process which requires some pre-defined information about the object and whose outcome is not always uniquely-defined. Moreover, the diffraction patterns must be recorded under oversampling conditions, a pre-requisite to be able to solve the phase problem. Here, we report how holography and CDI can be merged into one superior technique: holographic coherent diffraction imaging (HCDI). An inline hologram can be recorded by employing a modified CDI experimental scheme. We demonstrate that the amplitude of the Fourier transform of an inline hologram is related to the complex-valued visibility, thus providing information on both, the amplitude and the phase of the scattered wave in the plane of the diffraction pattern. With the phase information available, the condition of oversampling the diffraction patterns can be relaxed, and the

  16. When holography meets coherent diffraction imaging.

    PubMed

    Latychevskaia, Tatiana; Longchamp, Jean-Nicolas; Fink, Hans-Werner

    2012-12-17

    The phase problem is inherent to crystallographic, astronomical and optical imaging where only the intensity of the scattered signal is detected and the phase information is lost and must somehow be recovered to reconstruct the object's structure. Modern imaging techniques at the molecular scale rely on utilizing novel coherent light sources like X-ray free electron lasers for the ultimate goal of visualizing such objects as individual biomolecules rather than crystals. Here, unlike in the case of crystals where structures can be solved by model building and phase refinement, the phase distribution of the wave scattered by an individual molecule must directly be recovered. There are two well-known solutions to the phase problem: holography and coherent diffraction imaging (CDI). Both techniques have their pros and cons. In holography, the reconstruction of the scattered complex-valued object wave is directly provided by a well-defined reference wave that must cover the entire detector area which often is an experimental challenge. CDI provides the highest possible, only wavelength limited, resolution, but the phase recovery is an iterative process which requires some pre-defined information about the object and whose outcome is not always uniquely-defined. Moreover, the diffraction patterns must be recorded under oversampling conditions, a pre-requisite to be able to solve the phase problem. Here, we report how holography and CDI can be merged into one superior technique: holographic coherent diffraction imaging (HCDI). An inline hologram can be recorded by employing a modified CDI experimental scheme. We demonstrate that the amplitude of the Fourier transform of an inline hologram is related to the complex-valued visibility, thus providing information on both, the amplitude and the phase of the scattered wave in the plane of the diffraction pattern. With the phase information available, the condition of oversampling the diffraction patterns can be relaxed, and the

  17. Cross ambiguity functions on the MasPar MP-2

    SciTech Connect

    Carlson, D.A.; Pryor, D.V.; Frock, C.K.

    1995-12-01

    In a signal processing environment, cross ambiguity functions are often used to detect when one signal is a time and/or frequency shift of another. They consist of multiple cross-correlations, which can be computed efficiently using complex valued FFTs. This paper discusses the implementation of cross ambiguity functions on the MasPar MP-2, a SIMD processor array. Two different implementations are developed. The first computes each cross ambiguity function serially, using FFT code that parallelizes across the complete set of processors. The second uses the MasPar IORAM to realign the data so that the cross ambiguity functions can be computed in parallel. In this case, multiple FFTs are executed in parallel on subsets of the processors, which lowers the overall amount of communication required.

  18. Design, construction, and wire calibration of PAR BPM striplines

    NASA Astrophysics Data System (ADS)

    Sellyey, W.; Barr, D.; Erwin, L.

    1995-05-01

    The Positron Accumulator Ring (PAR) is part of the APS injection system. It received 24 30-ns FWHM bursts of 450-meV positrons, and compresses them into 6-nC, 290-ps rms bunches. Striplines were selected as beam position monitors (BPMs) to assure that good position sensitivity is achieved. This paper will describe the design, construction, and wire calibration of the 16 PAR BPMs. It will be demonstrated that all relevant stripline parameters can be determined by solving the two-dimensional LaPlace equation. This was done numerically using the electrostatic part of the PE2D computer program. The construction of the units will be briefly discussed. Wire calibration data on one of the final units will be compared with theory at four frequencies.

  19. Quantitative measurement of phase variation amplitude of ultrasonic diffraction grating based on diffraction spectral analysis

    SciTech Connect

    Pan, Meiyan Zeng, Yingzhi; Huang, Zuohua

    2014-09-15

    A new method based on diffraction spectral analysis is proposed for the quantitative measurement of the phase variation amplitude of an ultrasonic diffraction grating. For a traveling wave, the phase variation amplitude of the grating depends on the intensity of the zeroth- and first-order diffraction waves. By contrast, for a standing wave, this amplitude depends on the intensity of the zeroth-, first-, and second-order diffraction waves. The proposed method is verified experimentally. The measured phase variation amplitude ranges from 0 to 2π, with a relative error of approximately 5%. A nearly linear relation exists between the phase variation amplitude and driving voltage. Our proposed method can also be applied to ordinary sinusoidal phase grating.

  20. Diffraction Revisited: Position of Diffraction Spots upon Rotation of a Transmission Grating

    ERIC Educational Resources Information Center

    Vollmer, Michael

    2005-01-01

    Diffraction gratings are often used in the laboratory to determine the wavelength of laser light. What happens to the spots on the screen if the grating is rotated in this set-up? The answer is nontrivial and instructive.

  1. Macroinvertebrates of Par Pond and Pond B: Final report, January 1984-June 1985

    SciTech Connect

    Kondratieff, B.C.; Chimney, M.J.; Painter, W.B.

    1985-08-01

    This document reports on the Par Pond and Pond B macroinvertebrate sampling program from January 1984 through June 1985. It includes data on quantitative and qualitative benthic sampling, quantitative meroplankton sampling and quarterly diel sample. The basic objectives were to: (1) characterize the benthic and meroplankton macroinvertebrate communities of Par Pond and Pond B, with respect to taxonomic composition and diversity, density and relative abundance of functional feeding groups; (2) assess the impact of thermal discharges on the macroinvertebrate community of Par Pond; (3) assess the impact and significance of entrainment losses of macroinvertebrate meroplankton from Par Pond; and (4) compare Par Pond macroninvertebrate communities with those in Pond B.

  2. Une alternative au cobalt pour la synthese de nanotubes de carbone monoparoi par plasma inductif thermique

    NASA Astrophysics Data System (ADS)

    Carrier, Jean-Francois

    synthese de C-SWNT. Le produit final est par la suite recolte sur des filtres metalliques poreux, une fois le systeme mis a l'arret. Dans un premier temps, une analyse thermodynamique, calculee avec le logiciel Fact-Sage, a permis de mettre en lumiere l'etat des differentes produits et reactifs, tout au long de leur passage dans le systeme. Elle a permis de reveler la similitude de composition de la phase liquide du melange catalytique ternaire de base, avec celui du melange binaire, avec nickel et oxyde d'yttrium. Par la suite, une analyse du bilan d'energie, a l'aide d'un systeme d'acquisition de donnees, a permis de determiner que les conditions operatoires des cinq echantillons mis a l'essai etaient similaires. Au total, le produit final a ete caracterise a l'aide de six methodes de caracterisations differentes : l'analyse thermogravimetrique, la diffraction de rayons X, la microscopie electronique a balayage a haute resolution (HRSEM), la microscopie electronique a transmission (MET), la spectroscopie RAMAN, ainsi que la mesure de la surface specifique (BET). Les resultats de ces analyses ont permis de constater, de facon coherente, que le melange a base de molybdene etait celui qui produisait la moins bonne qualite de produit. Ensuite, en ordre croissant, s'en suivait du melange a base de MnO2 et de ZrO2. Le melange de reference, a base de cobalt, est au deuxieme rang en matiere de qualite. La palme revient au melange binaire, dont la proportion est double en nickel. Les resultats de ce travail de recherche permettent d'affirmer qu'il existe une alternative performante au cobalt pour effectuer la synthese de nanotubes de carbone monoparoi, par plasma inductif thermique. Cette alternative est l'utilisation d'un melange catalytique binaire a base de nickel et d'oxyde d'yttrium. Il est suggere que les performances plus faibles des recettes alternatives, moins performantes, pourraient etre expliquees par le profil thermique fixe du reacteur. Ceci pourrait favoriser

  3. The Pars Interarticularis Stress Reaction, Spondylolysis, and Spondylolisthesis Progression

    PubMed Central

    Motley, Gina; Nyland, John; Jacobs, Jake; Caborn, David N. M.

    1998-01-01

    Objective: To review the classification, etiology, clinical and radiologic evaluation, and management of the pars interarticularis stress reaction, spondylolysis, and spondylolisthesis progression. Data Sources: Grateful Med was searched from 1980 to 1998 using the terms “spondylolysis,” “spondylolisthesis,” “female athlete” “spondylogenic,” and “pars interarticularis.” Data Synthesis: The progression from pars interarticularis stress reaction through spondylolysis to spondylolisthesis is common in adolescent athletes, and, because of hormonal influences and cheerleading and gymnastic maneuvers, females are particularly at risk. Proper diagnosis and management include a thorough evaluation, radiographs (possibly with technetium bone scan or single-photon emission computed tomography), activity modification, dietary counseling, a therapeutic exercise program focusing on proper trunk and hip muscle strength and extensibility balances, and education regarding proper back postures, positioning, lifting mechanics, and jump landings. Conclusions/Recommendations: The athletic trainer plays an integral part in managing this injury progression, particularly with identifying at-risk individuals and intervening appropriately. ImagesFigure 4. PMID:16558534

  4. Deterministic approaches to coherent diffractive imaging

    NASA Astrophysics Data System (ADS)

    Allen, L. J.; D'Alfonso, A. J.; Martin, A. V.; Morgan, A. J.; Quiney, H. M.

    2016-01-01

    In this review we will consider the retrieval of the wave at the exit surface of an object illuminated by a coherent probe from one or more measured diffraction patterns. These patterns may be taken in the near-field (often referred to as images) or in the far field (the Fraunhofer diffraction pattern, where the wave is the Fourier transform of that at the exit surface). The retrieval of the exit surface wave from such data is an inverse scattering problem. This inverse problem has historically been solved using nonlinear iterative methods, which suffer from convergence and uniqueness issues. Here we review deterministic approaches to obtaining the exit surface wave which ameliorate those problems.

  5. Phase-shifting point diffraction interferometer

    DOEpatents

    Medecki, Hector

    1998-01-01

    Disclosed is a point diffraction interferometer for evaluating the quality of a test optic. In operation, the point diffraction interferometer includes a source of radiation, the test optic, a beam divider, a reference wave pinhole located at an image plane downstream from the test optic, and a detector for detecting an interference pattern produced between a reference wave emitted by the pinhole and a test wave emitted from the test optic. The beam divider produces separate reference and test beams which focus at different laterally separated positions on the image plane. The reference wave pinhole is placed at a region of high intensity (e.g., the focal point) for the reference beam. This allows reference wave to be produced at a relatively high intensity. Also, the beam divider may include elements for phase shifting one or both of the reference and test beams.

  6. Phase-shifting point diffraction interferometer

    DOEpatents

    Medecki, H.

    1998-11-10

    Disclosed is a point diffraction interferometer for evaluating the quality of a test optic. In operation, the point diffraction interferometer includes a source of radiation, the test optic, a beam divider, a reference wave pinhole located at an image plane downstream from the test optic, and a detector for detecting an interference pattern produced between a reference wave emitted by the pinhole and a test wave emitted from the test optic. The beam divider produces separate reference and test beams which focus at different laterally separated positions on the image plane. The reference wave pinhole is placed at a region of high intensity (e.g., the focal point) for the reference beam. This allows reference wave to be produced at a relatively high intensity. Also, the beam divider may include elements for phase shifting one or both of the reference and test beams. 8 figs.

  7. Resonant diffraction of synchrotron radiation: New possibilities

    NASA Astrophysics Data System (ADS)

    Ovchinnikova, E. N.; Mukhamedzhanov, E. Kh.

    2016-09-01

    Resonant diffraction of synchrotron radiation (SR) is a modern method of studying the structure and properties of condensed matter that can be implemented on third-generation synchrotrons. This method allows one to investigate local properties of media (including magnetic and electronic ones) and observe thermal vibrations, defects, and orbital and charge orderings. A brief review of the advance provided by SR resonant diffraction is presented, and the capabilities of this method for analyzing phase transitions are considered in more detail by the example of potassium dihydrogen phosphate and rubidium dihydrogen phosphate crystals. It is shown that the investigation of the temperature dependence of forbidden reflections not only makes it possible to observe the transition from para- to ferroelectric phase, but also gives information about the proton distribution at hydrogen bonds.

  8. Diffractive and exclusive measurements at CDF

    SciTech Connect

    Gallinaro, Michele; /Rockefeller U.

    2006-06-01

    Experimental results from the CDF experiment at the Tevatron in p{bar p} collisions at {radical}s = 1.96 TeV are presented on the diffractive structure function at different values of the exchanged momentum transfer squared in the range 0 < Q{sup 2} < 10,000 GeV{sup 2}, on the four-momentum transfer |t| distribution in the region 0 < |t| < 1 GeV{sup 2} for both soft and hard diffractive events up to Q{sup 2} {approx} 4,500 GeV{sup 2}, and on the first experimental evidence of exclusive production in both dijet and diphoton events. A novel technique to align the Roman Pot detectors is also presented.

  9. Periodically distributed objects with quasicrystalline diffraction pattern

    SciTech Connect

    Wolny, Janusz Strzalka, Radoslaw; Kuczera, Pawel

    2015-03-30

    It is possible to construct fully periodically distributed objects with a diffraction pattern identical to the one obtained for quasicrystals. These objects are probability distributions of distances obtained in the statistical approach to aperiodic structures distributed periodically. The diffraction patterns have been derived by using a two-mode Fourier transform—a very powerful method not used in classical crystallography. It is shown that if scaling is present in the structure, this two-mode Fourier transform can be reduced to a regular Fourier transform with appropriately rescaled scattering vectors and added phases. Detailed case studies for model sets 1D Fibonacci chain and 2D Penrose tiling are discussed. Finally, it is shown that crystalline, quasicrystalline, and approximant structures can be treated in the same way.

  10. Relief diffracted elements recorded on absorbent photopolymers.

    PubMed

    Gallego, S; Márquez, A; Ortuño, M; Francés, J; Pascual, I; Beléndez, A

    2012-05-01

    Relief surface changes provide interesting possibilities for storing diffractive optical elements on photopolymers and are an important source of information for characterizing and understanding the material behavior. In this paper we use a 3-dimensional model, based on direct parameter measurements, for predicting the relief structures generated on without-coverplate photopolymers. We have analyzed different spatial frequency and recording intensity distributions such as binary and blazed periodic patterns. This model was successfully applied to different photopolymers with different values of monomer diffusion.

  11. Femtosecond Electron Diffraction and Shadow Imaging

    NASA Astrophysics Data System (ADS)

    McPherson, David

    2009-10-01

    Using femtosecond electron pulses as an imaging tool, we can probe ultrafast dynamics by taking snapshots at different time delays. By using femtosecond electron diffraction (FED), we can examine structural dynamics at the atomic level in real time, and study the structure-function correlation. Additionally, femtosecond electron shadow imaging (FESI) can explore the dynamics of laser induced plasmas off the surfaces of conductors, semiconductors, and insulators.

  12. Diffraction imaging (topography) with monochromatic synchrotron radiation

    SciTech Connect

    Steiner, B.; Kuriyama, M.; Dobbyn, R.C.; Laor, U.

    1988-01-01

    Structural information of special interest to crystal growers and device physicists is now available from high resolution monochromatic synchrotron diffraction imaging (topography). In the review, the importance of superior resolution in momentum transfer and in space is described, and illustrations are taken from a variety of crystals: gallium arsenide, cadmium telluride, mercuric iodide, bismuth silicon oxide, and lithium niobate. The identification and understanding of local variations in crystal growth processes are shown. Finally, new experimental opportunities now available for exploitation are indicated.

  13. QCD and hard diffraction at the LHC

    SciTech Connect

    Albrow, Michael G.; /Fermilab

    2005-09-01

    As an introduction to QCD at the LHC the author gives an overview of QCD at the Tevatron, emphasizing the high Q{sup 2} frontier which will be taken over by the LHC. After describing briefly the LHC detectors the author discusses high mass diffraction, in particular central exclusive production of Higgs and vector boson pairs. The author introduces the FP420 project to measure the scattered protons 420m downstream of ATLAS and CMS.

  14. Diffraction by spherically symmetric inhomogeneous scatterers

    SciTech Connect

    Perel`man, A.Y.

    1995-05-01

    The problem of diffraction by scatterers optically inhomogeneous in the radial direction illuminated by sources with a fixed azimuthal structure is solved. Standard models are proposed for approximating the exact solution of the problem, in which partial potentials are represented in terms of exponential and exponential and cylindrical functions, and the corresponding algorithms for solving the problem are developed. A formula is deduced for the scattering cross section of a radially inhomogeneous sphere. 8 refs.

  15. Focusing Diffraction Grating Element with Aberration Control

    NASA Technical Reports Server (NTRS)

    Iazikov, Dmitri; Mossberg, Thomas W.; Greiner, Christoph M.

    2010-01-01

    Diffraction gratings are optical components with regular patterns of grooves, which angularly disperse incoming light by wavelength in a single plane, called dispersion plane. Traditional gratings on flat substrates do not perform wavefront transformation in the plane perpendicular to the dispersion plane. The device proposed here exhibits regular diffraction grating behavior, dispersing light. In addition, it performs wavelength transformation (focusing or defocusing) of diffracted light in a direction perpendicular to the dispersion plane (called sagittal plane). The device is composed of a diffraction grating with the grooves in the form of equidistant arcs. It may be formed by defining a single arc or an arc approximation, then translating it along a certain direction by a distance equal to a multiple of a fixed distance ("grating period") to obtain other groove positions. Such groove layout is nearly impossible to obtain using traditional ruling methods, such as mechanical ruling or holographic scribing, but is trivial for lithographically scribed gratings. Lithographic scribing is the newly developed method first commercially introduced by LightSmyth Technologies, which produces gratings with the highest performance and arbitrary groove shape/spacing for advanced aberration control. Unlike other types of focusing gratings, the grating is formed on a flat substrate. In a plane perpendicular to the substrate and parallel to the translation direction, the period of the grating and, therefore, the projection of its k-vector onto the plane is the same for any location on the grating surface. In that plane, no waveform transformation by the grating k-vector occurs, except of simple redirection.

  16. Phase-targeted X-ray diffraction

    PubMed Central

    Hansford, G. M.

    2016-01-01

    A powder X-ray diffraction (XRD) method to enhance the signal of a specific crystalline phase within a mixture is presented for the first time. Specificity to the targeted phase relies on finding coincidences in the ratios of crystal d spacings and the ratios of elemental characteristic X-ray energies. Such coincidences can be exploited so that the two crystal planes diffract through the same scattering angle at two different X-ray energies. An energy-resolving detector placed at the appropriate scattering angle will detect a significantly enhanced signal at these energies if the target mineral or phase is present in the sample. When implemented using high scattering angles, for example 2θ > 150°, the method is tolerant to sample morphology and distance on the scale of ∼2 mm. The principle of the method is demonstrated experimentally using Pd Lα1 and Pd Lβ1 emission lines to enhance the diffraction signal of quartz. Both a pure quartz powder pellet and an unprepared mudstone rock specimen are used to test and develop the phase-targeted method. The technique is further demonstrated in the sensitive detection of retained austenite in steel samples using a combination of In Lβ1 and Ti Kβ emission lines. For both these examples it is also shown how the use of an attenuating foil, with an absorption edge close to and above the higher-energy characteristic X-ray line, can serve to isolate to some degree the coincidence signals from other fluorescence and diffraction peaks in the detected spectrum. The phase-targeted XRD technique is suitable for implementation using low-cost off-the-shelf components in a handheld or in-line instrument format. PMID:27738415

  17. Deep inelastic scattering, diffraction and all that

    NASA Astrophysics Data System (ADS)

    Canal, C. A. García; Sassot, R.

    2000-08-01

    These lectures include an introduction to the partonic description of the proton, the photon and the `color singlet', as seen in inclusive and semi-inclusive DIS, in e+e- collisions, and in diffractive processes, respectively. Their formal treatment using structure, fragmentation, and fracture functions is outlined giving an insight into the perturbative QCD framework for these functions. Examples and comparisons with experimental data from LEP, HERA, and Tevatron are also covered.

  18. ParB Partition Proteins: Complex Formation and Spreading at Bacterial and Plasmid Centromeres

    PubMed Central

    Funnell, Barbara E.

    2016-01-01

    In bacteria, active partition systems contribute to the faithful segregation of both chromosomes and low-copy-number plasmids. Each system depends on a site-specific DNA binding protein to recognize and assemble a partition complex at a centromere-like site, commonly called parS. Many plasmid, and all chromosomal centromere-binding proteins are dimeric helix-turn-helix DNA binding proteins, which are commonly named ParB. Although the overall sequence conservation among ParBs is not high, the proteins share similar domain and functional organization, and they assemble into similar higher-order complexes. In vivo, ParBs “spread,” that is, DNA binding extends away from the parS site into the surrounding non-specific DNA, a feature that reflects higher-order complex assembly. ParBs bridge and pair DNA at parS and non-specific DNA sites. ParB dimers interact with each other via flexible conformations of an N-terminal region. This review will focus on the properties of the HTH centromere-binding protein, in light of recent experimental evidence and models that are adding to our understanding of how these proteins assemble into large and dynamic partition complexes at and around their specific DNA sites. PMID:27622187

  19. ParB Partition Proteins: Complex Formation and Spreading at Bacterial and Plasmid Centromeres

    PubMed Central

    Funnell, Barbara E.

    2016-01-01

    In bacteria, active partition systems contribute to the faithful segregation of both chromosomes and low-copy-number plasmids. Each system depends on a site-specific DNA binding protein to recognize and assemble a partition complex at a centromere-like site, commonly called parS. Many plasmid, and all chromosomal centromere-binding proteins are dimeric helix-turn-helix DNA binding proteins, which are commonly named ParB. Although the overall sequence conservation among ParBs is not high, the proteins share similar domain and functional organization, and they assemble into similar higher-order complexes. In vivo, ParBs “spread,” that is, DNA binding extends away from the parS site into the surrounding non-specific DNA, a feature that reflects higher-order complex assembly. ParBs bridge and pair DNA at parS and non-specific DNA sites. ParB dimers interact with each other via flexible conformations of an N-terminal region. This review will focus on the properties of the HTH centromere-binding protein, in light of recent experimental evidence and models that are adding to our understanding of how these proteins assemble into large and dynamic partition complexes at and around their specific DNA sites.

  20. Proteinase-Activated Receptor 1 (PAR1) Regulates Leukemic Stem Cell Functions

    PubMed Central

    Bäumer, Nicole; Krause, Annika; Köhler, Gabriele; Lettermann, Stephanie; Evers, Georg; Hascher, Antje; Bäumer, Sebastian; Berdel, Wolfgang E.

    2014-01-01

    External signals that are mediated by specific receptors determine stem cell fate. The thrombin receptor PAR1 plays an important role in haemostasis, thrombosis and vascular biology, but also in tumor biology and angiogenesis. Its expression and function in hematopoietic stem cells is largely unknown. Here, we analyzed expression and function of PAR1 in primary hematopoietic cells and their leukemic counterparts. AML patients' blast cells expressed much lower levels of PAR1 mRNA and protein than CD34+ progenitor cells. Constitutive Par1-deficiency in adult mice did not affect engraftment or stem cell potential of hematopoietic cells. To model an AML with Par1-deficiency, we retrovirally introduced the oncogene MLL-AF9 in wild type and Par1−/− hematopoietic progenitor cells. Par1-deficiency did not alter initial leukemia development. However, the loss of Par1 enhanced leukemic stem cell function in vitro and in vivo. Re-expression of PAR1 in Par1−/− leukemic stem cells delayed leukemogenesis in vivo. These data indicate that Par1 contributes to leukemic stem cell maintenance. PMID:24740120

  1. ParB Partition Proteins: Complex Formation and Spreading at Bacterial and Plasmid Centromeres.

    PubMed

    Funnell, Barbara E

    2016-01-01

    In bacteria, active partition systems contribute to the faithful segregation of both chromosomes and low-copy-number plasmids. Each system depends on a site-specific DNA binding protein to recognize and assemble a partition complex at a centromere-like site, commonly called parS. Many plasmid, and all chromosomal centromere-binding proteins are dimeric helix-turn-helix DNA binding proteins, which are commonly named ParB. Although the overall sequence conservation among ParBs is not high, the proteins share similar domain and functional organization, and they assemble into similar higher-order complexes. In vivo, ParBs "spread," that is, DNA binding extends away from the parS site into the surrounding non-specific DNA, a feature that reflects higher-order complex assembly. ParBs bridge and pair DNA at parS and non-specific DNA sites. ParB dimers interact with each other via flexible conformations of an N-terminal region. This review will focus on the properties of the HTH centromere-binding protein, in light of recent experimental evidence and models that are adding to our understanding of how these proteins assemble into large and dynamic partition complexes at and around their specific DNA sites. PMID:27622187

  2. Dynamic Filament Formation by a Divergent Bacterial Actin-Like ParM Protein

    PubMed Central

    Brzoska, Anthony J.; Jensen, Slade O.; Barton, Deborah A.; Davies, Danielle S.; Overall, Robyn L.; Skurray, Ronald A.; Firth, Neville

    2016-01-01

    Actin-like proteins (Alps) are a diverse family of proteins whose genes are abundant in the chromosomes and mobile genetic elements of many bacteria. The low-copy-number staphylococcal multiresistance plasmid pSK41 encodes ParM, an Alp involved in efficient plasmid partitioning. pSK41 ParM has previously been shown to form filaments in vitro that are structurally dissimilar to those formed by other bacterial Alps. The mechanistic implications of these differences are not known. In order to gain insights into the properties and behavior of the pSK41 ParM Alp in vivo, we reconstituted the parMRC system in the ectopic rod-shaped host, E. coli, which is larger and more genetically amenable than the native host, Staphylococcus aureus. Fluorescence microscopy showed a functional fusion protein, ParM-YFP, formed straight filaments in vivo when expressed in isolation. Strikingly, however, in the presence of ParR and parC, ParM-YFP adopted a dramatically different structure, instead forming axial curved filaments. Time-lapse imaging and selective photobleaching experiments revealed that, in the presence of all components of the parMRC system, ParM-YFP filaments were dynamic in nature. Finally, molecular dissection of the parMRC operon revealed that all components of the system are essential for the generation of dynamic filaments. PMID:27310470

  3. Interior impedance wedge diffraction with surface waves

    NASA Technical Reports Server (NTRS)

    Balanis, Constantine A.; Griesser, Timothy

    1988-01-01

    The exact impedance wedge solution is evaluated asymptotically using the method of steepest descents for plane wave illumination at normal incidence. Uniform but different impedances on each face are considered for both soft and hard polarizations. The asymptotic solution isolates the incident, singly reflected, multiply reflected, diffracted, and surface wave fields. Multiply reflected fields of any order are permitted. The multiply reflected fields from the exact solution are written as ratios of auxiliary Maliuzhinets functions, whereas a geometrical analysis gives the reflected fields as products of reflection coefficients. These two representations are shown to be identical in magnitude, phase and the angular range over which they exist. The diffracted field includes four Fresnel transition functions as in the perfect conductor case, and the expressions for the appropriate discontinuities at the shadow boundaries are presented. The surface wave exists over a finite angular range and only for certain surface impedances. A surface wave transition field is included to retain continuity. Computations are presented for interior wedge diffractions although the formulation is valid for both exterior and interior wedges.

  4. Integrated Diffractive Optics for Surface Ion Traps

    NASA Astrophysics Data System (ADS)

    Streed, Erik; Ghadimi, Moji; Blums, Valdis; Norton, Benjamin; Connor, Paul; Amini, Jason; Volin, Curtis; Lobino, Mirko; Kielpinski, David

    2016-05-01

    Photonic interconnects are a bottleneck to achieving large-scale trapped ion quantum computing. We have modified a Georgia Tech Research Institute microwave chip trap by using e-beam lithography to write reflective diffractive collimating optics (80 μm x 127 μm, f=58.6 μm, λ=369.5nm) on the center electrode. The optics have an NA of 0.55 x 0.73, capturing 13.2% of the solid angle. To evaluate the optics 174Yb+ was loaded by isotope selective photo-ionization from a thermal oven and then shuttled to imaging sites. Near diffraction limited sub-wavelength ion images were obtained with an observed spot sized FWHM of 338 nm x 268 nm vs. a diffraction limit of 336 nm x 257 nm. The total photon collection efficiency was measured to be 5.2+/-1.2%. Coupling into a single mode fiber of up to 2.0+/-0.6% was observed, limited by mismatch in the coupling optics. Image mode quality indicates coupling up to 4% may be possible. Funding from Australian Research Council and IARPA.

  5. DNA hydration studied by neutron fiber diffraction

    SciTech Connect

    Fuller, W.; Forsyth, V.T.; Mahendrasingam, A.; Langan, P.; Pigram, W.J.

    1994-12-31

    The development of neutron high angle fiber diffraction to investigate the location of water around the deoxyribonucleic acid (DNA) double-helix is described. The power of the technique is illustrated by its application to the D and A conformations of DNA using the single crystal diffractometer, D19, at the Institute Laue-Langevin, Grenoble and the time of flight diffractometer, SXD, at the Rutherford Appleton ISIS Spallation Neutron Source. These studies show the existence of bound water closely associated with the DNA. The patterns of hydration in these two DNA conformations are quite distinct and are compared to those observed in X-ray single crystal studies of two-stranded oligodeoxynucleotides. Information on the location of water around the DNA double-helix from the neutron fiber diffraction studies is combined with that on the location of alkali metal cations from complementary X-ray high angle fiber diffraction studies at the Daresbury Laboratory SRS using synchrotron radiation. These analyses emphasize the importance of viewing DNA, water and ions as a single system with specific interactions between the three components and provide a basis for understanding the effect of changes in the concentration of water and ions in inducing conformations] transitions in the DNA double-helix.

  6. Studies on X-ray diffraction microscopy

    NASA Astrophysics Data System (ADS)

    Miao, Huijie

    This dissertation includes three main parts: studies on coherence requirements for the diffraction microscopy experiments, ice formation on frozen-hydrated sample during data collection, and centering of the diffraction data sets. These three subjects are all in support of our groups overall goal of high resolution 3D imaging of frozen hydrated eukaryotic cells via x-ray diffraction microscopy. X-ray diffraction microscopy requires coherent illumination. However, the actual degree of coherence at some beamlines has never been tested. In research on coherence, our first aim is to determine the transverse coherence width at the sample plane at BL 9.0.1 at the Advanced Light Source in Lawrence Berkeley National Laboratory. An analytical calculation of the coherence at the sample plane is presented. Experimental diffraction patterns of pinhole-pair samples were also taken at the beamline to determine the coherence. Due to the irregular shape of the pinholes and other optics complexity, it was very difficult to fit the data with known theoretical equations as it was traditionally done with 1D data. However, we found out that the auto-correlation function shows clearly three spots. Theoretical calculation have been carried out to show that the degree of coherence can be obtained from the intensities of the three spots. These results are compared with the results from the analytical calculation. We then perform a simulation, showing the required transverse coherence width for reconstructing samples with a given size. Ice accumulation has been a major problem in X-ray diffraction microscopy with frozen hydrated samples. Since the ice structure is different from point to point, we cannot subtract the scattering from ice, nor assume a completely "empty" region outside the finite support constraint area as required for reconstruction. Ice forms during the sample preparation and transfer. However, from the tests we did in September 2007, we found that the ice layer thickens

  7. Enhanced high-speed coherent diffraction imaging

    NASA Astrophysics Data System (ADS)

    Potier, Jonathan; Fricker, Sebastien; Idir, Mourad

    2011-03-01

    Due to recent advances in X-ray microscopy, we are now able to image objects with nanometer resolution thanks to Synchrotron beam lines or Free Electron Lasers (FEL). The PCI (Phase Contrast Imaging) is a robust technique that can recover the wavefront from measurements of only few intensity pictures in the Fresnel diffraction region. With our fast straightforward calculus methods, we manage to provide the phase induced by a microscopic specimen in few seconds. We can therefore obtain high contrasted images from transparent materials at very small scales. To reach atomic resolution imaging and thus make a transition from the near to the far field, the Coherent Diffraction Imaging (CDI) technique finds its roots in the analysis of diffraction patterns to obtain the phase of the altered complex wave. Theoretical results about existence and uniqueness of this retrieved piece of information by both iterative and direct algorithms have already been released. However, performances of algorithms remain limited by the coherence of the X-ray beam, presence of random noise and the saturation threshold of the detector. We will present reconstructions of samples using an enhanced version of HIO algorithm improving the speed of convergence and its repeatability. As a first step toward a practical X-Ray CDI system, initial images for reconstructions are acquired with the laser-based CDI system working in the visible spectrum.

  8. Double diffraction in an atomic gravimeter

    NASA Astrophysics Data System (ADS)

    Malossi, N.; Bodart, Q.; Merlet, S.; Lévèque, T.; Landragin, A.; Santos, F. Pereira Dos

    2010-01-01

    We demonstrate the realization of a scheme for cold-atom gravimetry based on the recently demonstrated use of double-diffraction beam splitters [T. Lévèque, A. Gauguet, F. Michaud, F. Pereira Dos Santos, and A. Landragin, Phys. Rev. Lett. 103, 080405 (2009)], where the use of two retro-reflected Raman beams allows symmetric diffraction in ±ℏkeff momenta. Although in principle restricted to the case of zero Doppler shift, for which the two pairs of Raman beams are simultaneously resonant, such diffraction pulses can remain efficient on atoms with nonzero velocity, such as in a gravimeter, when the frequency of one of the two Raman laser sources is modulated. Such pulses are used to realize an interferometer insensitive to laser phase noise and some of the dominant systematics. This approach reduces the technical requirements and would allow the realization of a simple atomic gravimeter. A sensitivity of 1.2×10-7g per shot is demonstrated.

  9. Diffractive coherence in multilayer dielectric gratings

    SciTech Connect

    Shore, B.W.; Feit, M.D.; Perry, M.D.; Boyd, R.D.; Britten, J.A.; Li, Lifeng

    1995-05-26

    Successful operation of large-scale high-power lasers, such as those in use and planned at LLNL and elsewhere, require optical elements that can withstand extremely high fluences without suffering damage. Of particular concern are dielectric diffraction gratings used for beam sampling and pulse compression. Laser induced damage to bulk dielectric material originates with coupling of the electric field of the radiation to bound electrons, proceeding through a succession of mechanisms that couple the electron kinetic energy to lattice energy and ultimately to macroscopic structural changes (e.g. melting). The constructive interference that is responsible for the diffractive behavior of a grating or the reflective properties of a multilayer dielectric stack can enhance the electric field above values that would occur in unstructured homogeneous material. Much work has been done to model damage to bulk matter. The presence of nonuniform electric fields, resulting from diffractive coherence, has the potential to affect damage thresholds and requires more elaborate theory. We shall discuss aspects of work directed towards understanding the influence of dielectric structures upon damage, with particular emphasis on computations and interpretation of electric fields within dielectric gratings and multilayer dielectric stacks, noting particularly the interference effects that occur in these structures.

  10. Data Exploration Toolkit for serial diffraction experiments

    SciTech Connect

    Zeldin, Oliver B.; Brewster, Aaron S.; Hattne, Johan; Uervirojnangkoorn, Monarin; Lyubimov, Artem Y.; Zhou, Qiangjun; Zhao, Minglei; Weis, William I.; Sauter, Nicholas K.; Brunger, Axel T.

    2015-02-01

    This paper describes a set of tools allowing experimentalists insight into the variation present within large serial data sets. Ultrafast diffraction at X-ray free-electron lasers (XFELs) has the potential to yield new insights into important biological systems that produce radiation-sensitive crystals. An unavoidable feature of the ‘diffraction before destruction’ nature of these experiments is that images are obtained from many distinct crystals and/or different regions of the same crystal. Combined with other sources of XFEL shot-to-shot variation, this introduces significant heterogeneity into the diffraction data, complicating processing and interpretation. To enable researchers to get the most from their collected data, a toolkit is presented that provides insights into the quality of, and the variation present in, serial crystallography data sets. These tools operate on the unmerged, partial intensity integration results from many individual crystals, and can be used on two levels: firstly to guide the experimental strategy during data collection, and secondly to help users make informed choices during data processing.

  11. Optical microscopy beyond the diffraction limit

    PubMed Central

    Smolyaninov, Igor I.

    2008-01-01

    Over the past century the resolution of far-field optical microscopes, which rely on propagating optical modes, was widely believed to be limited because of diffraction to a value on the order of a half-wavelength λ∕2 of the light used. Although immersion microscopes had slightly improved resolution on the order of λ∕2n, the increased resolution was limited by the small range of refractive indices, n, of available transparent materials. We are experiencing quick demolition of the diffraction limit in optical microscopy. Over the past few years numerous nonlinear optical microscopy techniques based on photoswitching and saturation of fluorescence demonstrated far-field resolution of 20 to 30 nm. The latest exciting example of these techniques has been demonstrated by Huang et al. [Science 319, 810–813 (2008)]. Moreover, recent progress in metamaterials indicates that artificial optical media can be created, which do not exhibit the diffraction limit. Resolution of linear “immersion” microscopes based on such metamaterials appears limited only by losses, which can be compensated by gain media. Thus, optical microscopy is quickly moving towards the 10 nm resolution scale, which should bring about numerous revolutionary advances in biomedical imaging. PMID:19404465

  12. The physical association of the P2Y12 receptor with PAR4 regulates arrestin-mediated Akt activation.

    PubMed

    Khan, Aasma; Li, Dongjun; Ibrahim, Salam; Smyth, Emer; Woulfe, Donna S

    2014-07-01

    It is now well accepted that protease activated receptor (PAR) 1 and PAR4 have differential roles in platelet activation. PAR4, a low-affinity thrombin receptor in human platelets, participates in sustained platelet activation in a P2Y12-dependent manner; however, the mechanisms are not defined. Our previous studies demonstrated that thrombin induces the association of PAR4 with P2Y12, together with arrestin recruitment to the complex. Here we show that PAR4 and P2Y12 directly interact to coregulate Akt signaling after PAR4 activation. We observed direct and specific interaction of P2Y12 with PAR4 but not PAR1 by bioluminescent resonance energy transfer when the receptors were coexpressed in human embryonic kidney 293T cells. PAR4-P2Y12 dimerization was promoted by PAR4-AP and inhibited by P2Y12 antagonist. By using sequence comparison of the transmembrane domains of PAR1 and PAR4, we designed a mutant form of PAR4, "PAR4SFT," by replacing LGL194-196 at the base of transmembrane domain 4 with the corresponding aligned PAR1 residues SFT 220-222. PAR4SFT supported only 8.74% of PAR4-P2Y12 interaction, abolishing P2Y12-dependent arrestin recruitment to PAR4 and Akt activation. Nonetheless, PAR4SFT still supported homodimerization with PAR4. PAR4SFT failed to induce a calcium flux when expressed independently; however, coexpression of increasing concentrations of PAR4SFT, together with PAR4 potentiated PAR4-mediated calcium flux, suggested that PAR4 act as homodimers to signal to Gq-coupled calcium responses. In conclusion, PAR4 LGL (194-196) governs agonist-dependent association of PAR4 with P2Y12 and contributes to Gq-coupled calcium responses. PAR4-P2Y12 association supports arrestin-mediated sustained signaling to Akt. Hence, PAR4-P2Y12 dimerization is likely to be important for the PAR4-P2Y12 dependent stabilization of platelet thrombi.

  13. The physical association of the P2Y12 receptor with PAR4 regulates arrestin-mediated Akt activation.

    PubMed

    Khan, Aasma; Li, Dongjun; Ibrahim, Salam; Smyth, Emer; Woulfe, Donna S

    2014-07-01

    It is now well accepted that protease activated receptor (PAR) 1 and PAR4 have differential roles in platelet activation. PAR4, a low-affinity thrombin receptor in human platelets, participates in sustained platelet activation in a P2Y12-dependent manner; however, the mechanisms are not defined. Our previous studies demonstrated that thrombin induces the association of PAR4 with P2Y12, together with arrestin recruitment to the complex. Here we show that PAR4 and P2Y12 directly interact to coregulate Akt signaling after PAR4 activation. We observed direct and specific interaction of P2Y12 with PAR4 but not PAR1 by bioluminescent resonance energy transfer when the receptors were coexpressed in human embryonic kidney 293T cells. PAR4-P2Y12 dimerization was promoted by PAR4-AP and inhibited by P2Y12 antagonist. By using sequence comparison of the transmembrane domains of PAR1 and PAR4, we designed a mutant form of PAR4, "PAR4SFT," by replacing LGL194-196 at the base of transmembrane domain 4 with the corresponding aligned PAR1 residues SFT 220-222. PAR4SFT supported only 8.74% of PAR4-P2Y12 interaction, abolishing P2Y12-dependent arrestin recruitment to PAR4 and Akt activation. Nonetheless, PAR4SFT still supported homodimerization with PAR4. PAR4SFT failed to induce a calcium flux when expressed independently; however, coexpression of increasing concentrations of PAR4SFT, together with PAR4 potentiated PAR4-mediated calcium flux, suggested that PAR4 act as homodimers to signal to Gq-coupled calcium responses. In conclusion, PAR4 LGL (194-196) governs agonist-dependent association of PAR4 with P2Y12 and contributes to Gq-coupled calcium responses. PAR4-P2Y12 association supports arrestin-mediated sustained signaling to Akt. Hence, PAR4-P2Y12 dimerization is likely to be important for the PAR4-P2Y12 dependent stabilization of platelet thrombi. PMID:24723492

  14. High Resolution Powder Diffraction and Structure Determination

    SciTech Connect

    Cox, D. E.

    1999-04-23

    It is clear that high-resolution synchrotrons X-ray powder diffraction is a very powerful and convenient tool for material characterization and structure determination. Most investigations to date have been carried out under ambient conditions and have focused on structure solution and refinement. The application of high-resolution techniques to increasingly complex structures will certainly represent an important part of future studies, and it has been seen how ab initio solution of structures with perhaps 100 atoms in the asymmetric unit is within the realms of possibility. However, the ease with which temperature-dependence measurements can be made combined with improvements in the technology of position-sensitive detectors will undoubtedly stimulate precise in situ structural studies of phase transitions and related phenomena. One challenge in this area will be to develop high-resolution techniques for ultra-high pressure investigations in diamond anvil cells. This will require highly focused beams and very precise collimation in front of the cell down to dimensions of 50 {micro}m or less. Anomalous scattering offers many interesting possibilities as well. As a means of enhancing scattering contrast it has applications not only to the determination of cation distribution in mixed systems such as the superconducting oxides discussed in Section 9.5.3, but also to the location of specific cations in partially occupied sites, such as the extra-framework positions in zeolites, for example. Another possible application is to provide phasing information for ab initio structure solution. Finally, the precise determination of f as a function of energy through an absorption edge can provide useful information about cation oxidation states, particularly in conjunction with XANES data. In contrast to many experiments at a synchrotron facility, powder diffraction is a relatively simple and user-friendly technique, and most of the procedures and software for data analysis

  15. Collective cell migration requires suppression of actomyosin at cell-cell contacts mediated by DDR1 and the cell polarity regulators Par3 and Par6.

    PubMed

    Hidalgo-Carcedo, Cristina; Hooper, Steven; Chaudhry, Shahid I; Williamson, Peter; Harrington, Kevin; Leitinger, Birgit; Sahai, Erik

    2011-01-01

    Collective cell migration occurs in a range of contexts: cancer cells frequently invade in cohorts while retaining cell-cell junctions. Here we show that collective invasion by cancer cells depends on decreasing actomyosin contractility at sites of cell-cell contact. When actomyosin is not downregulated at cell-cell contacts, migrating cells lose cohesion. We provide a molecular mechanism for this downregulation. Depletion of discoidin domain receptor 1 (DDR1) blocks collective cancer-cell invasion in a range of two-dimensional, three-dimensional and 'organotypic' models. DDR1 coordinates the Par3/Par6 cell-polarity complex through its carboxy terminus, binding PDZ domains in Par3 and Par6. The DDR1-Par3/Par6 complex controls the localization of RhoE to cell-cell contacts, where it antagonizes ROCK-driven actomyosin contractility. Depletion of DDR1, Par3, Par6 or RhoE leads to increased actomyosin contactility at cell-cell contacts, a loss of cell-cell cohesion and defective collective cell invasion.

  16. ParABS Systems of the Four Replicons of Burkholderia cenocepacia: New Chromosome Centromeres Confer Partition Specificity†

    PubMed Central

    Dubarry, Nelly; Pasta, Franck; Lane, David

    2006-01-01

    Most bacterial chromosomes carry an analogue of the parABS systems that govern plasmid partition, but their role in chromosome partition is ambiguous. parABS systems might be particularly important for orderly segregation of multipartite genomes, where their role may thus be easier to evaluate. We have characterized parABS systems in Burkholderia cenocepacia, whose genome comprises three chromosomes and one low-copy-number plasmid. A single parAB locus and a set of ParB-binding (parS) centromere sites are located near the origin of each replicon. ParA and ParB of the longest chromosome are phylogenetically similar to analogues in other multichromosome and monochromosome bacteria but are distinct from those of smaller chromosomes. The latter form subgroups that correspond to the taxa of their hosts, indicating evolution from plasmids. The parS sites on the smaller chromosomes and the plasmid are similar to the “universal” parS of the main chromosome but with a sequence specific to their replicon. In an Escherichia coli plasmid stabilization test, each parAB exhibits partition activity only with the parS of its own replicon. Hence, parABS function is based on the independent partition of individual chromosomes rather than on a single communal system or network of interacting systems. Stabilization by the smaller chromosome and plasmid systems was enhanced by mutation of parS sites and a promoter internal to their parAB operons, suggesting autoregulatory mechanisms. The small chromosome ParBs were found to silence transcription, a property relevant to autoregulation. PMID:16452432

  17. Transcriptional Profiling of ParA and ParB Mutants in Actively Dividing Cells of an Opportunistic Human Pathogen Pseudomonas aeruginosa

    PubMed Central

    Bartosik, Aneta A.; Glabski, Krzysztof; Jecz, Paulina; Mikulska, Sylwia; Fogtman, Anna; Koblowska, Marta; Jagura-Burdzy, Grazyna

    2014-01-01

    Accurate chromosome segregation to progeny cells is a fundamental process ensuring proper inheritance of genetic material. In bacteria with simple cell cycle, chromosome segregation follows replication initiation since duplicated oriC domains start segregating to opposite halves of the cell soon after they are made. ParA and ParB proteins together with specific DNA sequences are parts of the segregation machinery. ParA and ParB proteins in Pseudomonas aeruginosa are important for optimal growth, nucleoid segregation, cell division and motility. Comparative transcriptome analysis of parAnull and parBnull mutants versus parental P. aeruginosa PAO1161 strain demonstrated global changes in gene expression pattern in logarithmically growing planktonic cultures. The set of genes similarly affected in both mutant strains is designated Par regulon and comprises 536 genes. The Par regulon includes genes controlled by two sigma factors (RpoN and PvdS) as well as known and putative transcriptional regulators. In the absence of Par proteins, a large number of genes from RpoS regulon is induced, reflecting the need for slowing down the cell growth rate and decelerating the metabolic processes. Changes in the expression profiles of genes involved in c-di-GMP turnover point out the role of this effector in such signal transmission. Microarray data for chosen genes were confirmed by RT-qPCR analysis. The promoter regions of selected genes were cloned upstream of the promoter-less lacZ gene and analyzed in the heterologous host E. coliΔlac. Regulation by ParA and ParB of P. aeruginosa was confirmed for some of the tested promoters. Our data demonstrate that ParA and ParB besides their role in accurate chromosome segregation may act as modulators of genes expression. Directly or indirectly, Par proteins are part of the wider regulatory network in P. aeruginosa linking the process of chromosome segregation with the cell growth, division and motility. PMID:24498062

  18. Is PAR a Good Investment? Understanding the Costs and Benefits of Teacher Peer Assistance and Review Programs

    ERIC Educational Resources Information Center

    Papay, John P.; Johnson, Susan Moore

    2012-01-01

    Peer Assistance and Review (PAR) is a local labor-management initiative designed to improve teacher quality. In PAR, expert "consulting teachers" mentor, support, and evaluate novice and underperforming veteran teachers. Evaluations under PAR can lead to dismissals. The authors examine the costs and benefits of PAR, both financial and…

  19. Position-sensitive diffractive imaging in STEM by an automated chaining diffraction algorithm.

    PubMed

    Volkov, V V; Wall, J; Zhu, Y

    2008-07-01

    The diffractive imaging process used for retrieval of an aberration-free exit-wave function of a complex-valued object is optimized with a newly developed automated chaining diffraction (ACD) algorithm. Our algorithm enables automatic recovery of the amplitude and phase of the complex-valued objects with diffraction-limited resolution, starting from selected-area electron diffraction (SAED) patterns recorded from partially overlapping regions in STEM/CTEM. Based on a 'differential map' (DM) approach, the ACD algorithm meets very general requirements and, similar to 'hybrid input-output' (HIO) algorithm, can be applied to non-periodic, real or complex structures. In contrast to many other algorithms, it is not limited by the object's finite size or tight object support. Wide-field-of-view reconstructions for the complex-object-wave amplitude and phase made with ACD algorithm from SAED patterns down to sub-Angström resolution show the potential of diffractive imaging for quantitative analysis of functional materials at different length scales in terms of absorption and scattering mechanisms. The method can be applied also for imaging magnetic properties of samples by the electron or neutron microscopy and/or imaging of non-periodic objects with X-ray microscopy.

  20. Electron diffraction of CBr4 in superfluid helium droplets: A step towards single molecule diffraction

    NASA Astrophysics Data System (ADS)

    He, Yunteng; Zhang, Jie; Kong, Wei

    2016-07-01

    We demonstrate the practicality of electron diffraction of single molecules inside superfluid helium droplets using CBr4 as a testing case. By reducing the background from pure undoped droplets via multiple doping, with small corrections for dimers and trimers, clearly resolved diffraction rings of CBr4 similar to those of gas phase molecules can be observed. The experimental data from CBr4 doped droplets are in agreement with both theoretical calculations and with experimental results of gaseous species. The abundance of monomers and clusters in the droplet beam also qualitatively agrees with the Poisson statistics. Possible extensions of this approach to macromolecular ions will also be discussed. This result marks the first step in building a molecular goniometer using superfluid helium droplet cooling and field induced orientation. The superior cooling effect of helium droplets is ideal for field induced orientation, but the diffraction background from helium is a concern. This work addresses this background issue and identifies a possible solution. Accumulation of diffraction images only becomes meaningful when all images are produced from molecules oriented in the same direction, and hence a molecular goniometer is a crucial technology for serial diffraction of single molecules.

  1. Rigorous diffraction analysis using geometrical theory of diffraction for future mask technology

    NASA Astrophysics Data System (ADS)

    Chua, Gek S.; Tay, Cho J.; Quan, Chenggen; Lin, Qunying

    2004-05-01

    Advanced lithographic techniques such as phase shift masks (PSM) and optical proximity correction (OPC) result in a more complex mask design and technology. In contrast to the binary masks, which have only transparent and nontransparent regions, phase shift masks also take into consideration transparent features with a different optical thickness and a modified phase of the transmitted light. PSM are well-known to show prominent diffraction effects, which cannot be described by the assumption of an infinitely thin mask (Kirchhoff approach) that is used in many commercial photolithography simulators. A correct prediction of sidelobe printability, process windows and linearity of OPC masks require the application of rigorous diffraction theory. The problem of aerial image intensity imbalance through focus with alternating Phase Shift Masks (altPSMs) is performed and compared between a time-domain finite-difference (TDFD) algorithm (TEMPEST) and Geometrical theory of diffraction (GTD). Using GTD, with the solution to the canonical problems, we obtained a relationship between the edge on the mask and the disturbance in image space. The main interest is to develop useful formulations that can be readily applied to solve rigorous diffraction for future mask technology. Analysis of rigorous diffraction effects for altPSMs using GTD approach will be discussed.

  2. Electron diffraction of CBr4 in superfluid helium droplets: A step towards single molecule diffraction.

    PubMed

    He, Yunteng; Zhang, Jie; Kong, Wei

    2016-07-21

    We demonstrate the practicality of electron diffraction of single molecules inside superfluid helium droplets using CBr4 as a testing case. By reducing the background from pure undoped droplets via multiple doping, with small corrections for dimers and trimers, clearly resolved diffraction rings of CBr4 similar to those of gas phase molecules can be observed. The experimental data from CBr4 doped droplets are in agreement with both theoretical calculations and with experimental results of gaseous species. The abundance of monomers and clusters in the droplet beam also qualitatively agrees with the Poisson statistics. Possible extensions of this approach to macromolecular ions will also be discussed. This result marks the first step in building a molecular goniometer using superfluid helium droplet cooling and field induced orientation. The superior cooling effect of helium droplets is ideal for field induced orientation, but the diffraction background from helium is a concern. This work addresses this background issue and identifies a possible solution. Accumulation of diffraction images only becomes meaningful when all images are produced from molecules oriented in the same direction, and hence a molecular goniometer is a crucial technology for serial diffraction of single molecules. PMID:27448887

  3. A model for the condensation of the bacterial chromosome by the partitioning protein ParB

    NASA Astrophysics Data System (ADS)

    Broedersz, Chase; Wingreen, Ned

    2013-03-01

    The molecular machinery responsible for faithful segregation of the chromosome in bacteria such as Caulobacter crescentus and Bacillus subtilis includes the ParABS a.k.a. Spo0J/Soj partitioning system. In Caulobacter, prior to division, hundreds of ParB proteins bind to the DNA near the origin of replication, and localize to one pole of the cell. Subsequently, the ParB-DNA complex is translocated to the far pole by the binding and retraction of the ParA spindle-like apparatus. Remarkably, the localization of ParB proteins to specific regions of the chromosome appears to be controlled by only a few centromeric parS binding sites. Although lateral interactions between DNA-bound ParB are likely to be important for their localization, the long-range order of ParB domains on the chromosome appears to be inconsistent with a picture in which protein-protein interactions are limited to neighboring DNA-bound proteins. We developed a coarse-grained Brownian dynamics model that allows for lateral and 3D protein-protein interactions among bound ParB proteins. Our model shows how such interactions can condense and organize the DNA spatially, and can control the localization and the long-range order of the DNA-bound proteins.

  4. An ELISA method detecting the active form of suPAR.

    PubMed

    Zhou, Xiaolei; Xu, Mingming; Huang, Hailong; Mazar, Andrew; Iqbal, Zafar; Yuan, Cai; Huang, Mingdong

    2016-11-01

    Urokinase plasminogen activator receptor (uPAR) exists in a number of formats in human plasma, including soluble uPAR (suPAR) and uPAR fragments. We developed an ELISA method to detect specifically the active form suPAR, which binds to its natural ligand uPA. The intra CV and inter CV of this ELISA assay is 8.5% and 9.6% respectively, and the assay can recover 99.74% of added recombinant suPAR from 10% plasma. This assay is quite sensitive, capable of detecting down to 15pg/ml of suPAR, and can measure suPAR concentrations in the range of 0.031-8ng/ml with high linear relationship. Plasma samples from pregnant women were also measured for the active form of suPAR with this assay, giving an averaged level of 1.39ng/ml, slightly higher than the level of pooled plasma from healthy donors (0.96ng/ml). This study demonstrates the feasibility to measure the active form of suPAR, which will likely have value in clinical applications. PMID:27591605

  5. Serum suPAR in patients with FSGS: trash or treasure?

    PubMed

    Maas, Rutger J H; Deegens, Jeroen K J; Wetzels, Jack F M

    2013-07-01

    The urokinase-type plasminogen activator receptor (uPAR) has important functions in cell migration. uPAR can be shed from the cell membrane resulting in soluble uPAR (suPAR). Further cleavage gives rise to shorter fragments with largely unknown functions. Recent studies have demonstrated that both overexpression of uPAR on podocytes and the administration of suPAR cause proteinuria in mice. The common pathogenic mechanism involves the activation of podocyte β3-integrin. Increased activation of β3-integrin is also observed in patients with focal and segmental glomerulosclerosis (FSGS). These observations form the basis for the hypothesis that suPAR may be the circulating factor causing FSGS. A recent study fosters this idea by demonstrating increased suPAR levels in the serum of patients with FSGS and reporting an association with recurrence after transplantation and response to plasmapheresis. However, this study was heavily biased, and subsequent studies have given conflicting results. Although the experimental work is very suggestive, at present there is no proof that any known human suPAR fragment causes FSGS in humans. We therefore suggest that the measurement of suPAR using currently available assays has absolutely no value at the present time in decision-making in routine clinical practice.

  6. Observation of diffraction effects in positron channeling

    NASA Astrophysics Data System (ADS)

    Palathingal, J. C.; Peng, J. P.; Lynn, K. G.; Wu, X. Y.; Schultz, P. J.

    An experimental investigation of positron channeling was made with a high-angular resolution apparatus, employing positrons of kinetic energy 1 MeV, derived from the Brookhaven National Laboratory Dynamitron. The pattern of transmission through a Si(100) single crystal of thickness 0.245 mu m was investigated for a number of major planes. The authors have observed for the first time, in excellent detail, the fine structure of the channeling pattern expected to arise from the particle diffraction effects, theoretically explainable in terms of the quantum-mechanical many-beam calculations.

  7. Diffraction-contrast imaging of cold atoms

    NASA Astrophysics Data System (ADS)

    Turner, L. D.; Domen, K. F. E. M.; Scholten, R. E.

    2005-09-01

    We consider the inverse problem of in-line holography, applied to minimally destructive imaging of cold atom clouds. Absorption imaging near resonance provides a simple, but destructive measurement of atom column density. Imaging off resonance greatly reduces heating, and sequential images may be taken. Under the conditions required for off-resonant imaging, the generally intractable inverse problem may be linearized. A minimally destructive, quantitative and high-resolution image of the atom cloud column density is then retrieved from a single diffraction pattern.

  8. Femtosecond Electron Diffraction and Shadow Imaging

    NASA Astrophysics Data System (ADS)

    McPherson, David

    2010-03-01

    Using femtosecond electron pulses as an imaging tool, we can probe ultrafast dynamics by taking snapshots at different time delays. By using femtosecond electron diffraction (FED), we can examine structural dynamics at the atomic level in real time, and study the structure-function correlation. Additionally, femtosecond electron shadow imaging (FESI) can explore the dynamics of laser induced plasmas off the surfaces of conductors, semiconductors, and insulators. Project as part of a Research Experience for Undergraduates program funded by the National High Magnetic Field Laboratory, Florida State University and the National Science Foundation under supervision of Jianming Cao, PhD., Florida State University.

  9. Ampicillin Trihydrate from Synchrotron Powder Diffraction Data

    SciTech Connect

    Burley,J.; van de Streek, J.; Stephens, P.

    2006-01-01

    The crystal structure of ampicillin trihydrate {l_brace}systematic name: 6-[D(-)-{alpha}-aminophenylacetamido]penicillanic acid trihydrate{r_brace}, C{sub 16}H{sub 19}N{sub 3}O{sub 4}S{center_dot}3H{sub 2}O, a broad-spectrum {beta}-lactam antibiotic of the aminopenicillin type, has been determined from synchrotron X-ray powder diffraction data. The three water molecules form an infinite hydrogen-bonded chain through the crystal structure, with hydrogen bonds to the NH{sub 3}{sup +}, COO{sup -}, C{double_bond}O and NH groups of the ampicillin molecules.

  10. Higgs boson at LHC: a diffractive opportunity

    SciTech Connect

    Ducati, M. B. Gay; Silveira, G. G.

    2009-03-23

    An alternative process is presented for diffractive Higgs boson production in peripheral pp collisions, where the particles interact through the Double Pomeron Exchange. The event rate is computed as a central-rapidity distribution for Tevatron and LHC energies leading to a result around 0.6 pb, higher than the predictions from previous approaches. Therefore, this result arises as an enhanced signal for the detection of the Higgs boson in hadron colliders. The predictions for the Higgs boson photoproduction are compared to the ones obtained from a similar approach proposed by the Durham group, enabling an analysis of the future developments of its application to pp and AA collisions.

  11. Finite difference computation of blast diffraction

    NASA Astrophysics Data System (ADS)

    Hillier, R.; Graham, J. M. R.

    1985-07-01

    This paper discusses the use of numerical finite difference methods for predicting flow fields in which a shock or blast wave is diffracted at a sharp edge. Three different types of method are studied: Donor Cell differencing with and without Flux Corrected Transport, a Finite Volume method with an explicit artificial viscosity and Runge-Kutta time stepping, and a second order upwind method based on the solution of a Riemann wave problem at cell interfaces. In the case of weak shock waves a comparison is made with the flow field predicted by acoustic theory including flow separation. Results for stronger shocks are also presented.

  12. Lessons from LHC elastic and diffractive data

    SciTech Connect

    Martin, A.D.; Khoze, V.A.; Ryskin, M.G.

    2015-04-10

    In the light of LHC data, we discuss the global description of all high-energy elastic and diffractive data, using a one-pomeron model, but including multi-pomeron interactions. The LHC data indicate the need of a k{sub t}(s) behaviour, where k{sub t} is the gluon transverse momentum along the partonic ladder structure which describes the pomeron. We also discuss tensions in the data, as well as the t dependence of the slope of dσ{sub el}/dt in the small t domain.

  13. Scalar wave diffraction from a circular aperture

    SciTech Connect

    Cerjan, C.

    1995-01-25

    The scalar wave theory is used to evaluate the expected diffraction patterns from a circular aperture. The standard far-field Kirchhoff approximation is compared to the exact result expressed in terms of oblate spheroidal harmonics. Deviations from an expanding spherical wave are calculated for circular aperture radius and the incident beam wavelength using suggested values for a recently proposed point diffractin interferometer. The Kirchhoff approximation is increasingly reliable in the far-field limit as the aperture radius is increased, although significant errors in amplitude and phase persist.

  14. Optical image encryption based on diffractive imaging.

    PubMed

    Chen, Wen; Chen, Xudong; Sheppard, Colin J R

    2010-11-15

    In this Letter, we propose a method for optical image encryption based on diffractive imaging. An optical multiple random phase mask encoding system is applied, and one of the phase-only masks is selected and laterally translated along a preset direction during the encryption process. For image decryption, a phase retrieval algorithm is proposed to extract a high-quality plaintext. The feasibility and effectiveness of the proposed method are demonstrated by numerical results. The proposed method can provide a new strategy instead of conventional interference methods, and it may open up a new research perspective for optical image encryption.

  15. Sensitive visual test for concave diffraction gratings.

    NASA Technical Reports Server (NTRS)

    Bruner, E. C., Jr.

    1972-01-01

    A simple visual test for the evaluation of concave diffraction gratings is described. It is twice as sensitive as the Foucault knife edge test, from which it is derived, and has the advantage that the images are straight and free of astigmatism. It is particularly useful for grating with high ruling frequency where the above image faults limit the utility of the Foucault test. The test can be interpreted quantitatively and can detect zonal grating space errors of as little as 0.1 A.

  16. Coherent diffractive imaging using focused beams

    NASA Astrophysics Data System (ADS)

    Nugent, Keith A.; Peele, Andrew G.; Quiney, Harry M.

    2005-08-01

    It is well-known that the loss of phase information at detection means that a diffraction pattern may be consistent with a multitude of physically different structures. This paper shows that it is possible to perform unique structural determination in the absence of a-priori information using x-ray fields with phase curvature. We argue that significant phase curvature is already available using modern x-ray optics and we demonstrate an algorithm that allows the phase to be recovered uniquely and reliably.

  17. Flexible filamentous virus structure from fiber diffraction

    SciTech Connect

    Stubbs, Gerald; Kendall, Amy; McDonald, Michele; Bian, Wen; Bowles, Timothy; Baumgarten, Sarah; McCullough, Ian; Shi, Jian; Stewart, Phoebe; Bullitt, Esther; Gore, David; Ghabrial, Said

    2008-10-24

    Fiber diffraction data have been obtained from Narcissus mosaic virus, a potexvirus from the family Flexiviridae, and soybean mosaic virus (SMV), a potyvirus from the family Potyviridae. Analysis of the data in conjunction with cryo-electron microscopy data allowed us to determine the symmetry of the viruses and to make reconstructions of SMV at 19 {angstrom} resolution and of another potexvirus, papaya mosaic virus, at 18 {angstrom} resolution. These data include the first well-ordered data ever obtained for the potyviruses and the best-ordered data from the potexviruses, and offer the promise of eventual high resolution structure determinations.

  18. Near-perfect diffraction grating rhomb

    DOEpatents

    Wantuck, Paul J.

    1990-01-01

    A near-perfect grating rhomb enables an output beam to be diffracted to an angle offset from the input beam. The correcting grating is tipped relative to the dispersing grating to provide the offset angle. The correcting grating is further provided with a groove spacing which differs from the dispersing grating groove space by an amount effective to substantially remove angular dispersion in the output beam. A near-perfect grating rhomb has the capability for selective placement in a FEL to suppress sideband instabilities arising from the FEL.

  19. Diffractive Scattering and Gauge/String Duality

    ScienceCinema

    Tan, Chung-I [Brown University, Providence, Rhode Island, United States

    2016-07-12

    High-energy diffractive scattering will be discussed based on Gauge/String duality. As shown by Brower, Polchinski, Strassler and Tan, the ubiquitous Pomeron emerges naturally in gauge theories with string-theoretical descriptions. Its existence is intimately tied to gluons, and also to the energy-momentum tensor. With a confining dual background metric, the Pomeron can be interpreted as a 'massive graviton'. In a single unified step, both its infrared and ultraviolet properties are dealt with, reflecting confinement and conformal symmetry respectively. An effective field theory for high-energy scattering can be constructed. Applications based on this approach will also be described.

  20. Diffractive {rho}0 production at COMPASS

    SciTech Connect

    D'Hose, N.

    2005-10-06

    Diffractive leptoproduction of {rho}0 mesons, {mu} + N {yields} {mu} + N + {rho} is measured at COMPASS at < W > = 10 GeV over a wide range of Q2, 0.01 < Q2 < 10 GeV2. Angular distributions allow to determine spin density matrix elements. Preliminary results from COMPASS 2002 data are presented. They are consistent with a substantial increase of R = {sigma}L/{sigma}T with Q2 and a weak violation of SCHC, in agreement with other high energy experiments.

  1. Crystallographic orientation assessment by electron backscattered diffraction.

    PubMed

    Cléton, F; Jouneau, P H; Henry, S; Gäumann, M; Buffat, P A

    1999-01-01

    With an angular orientation accuracy of at least 1 , the ability of electron backscattered diffraction (EBSD) to determine and emphasise crystallographic orientation is illustrated. Using the abilities of specially developed software for computing Euler angles derived from the scanned specimen, misorientations are pointed out with acceptable flexibility and graphic output through crystallographic orientation maps or pole figures. This ability is displayed in the particular case of laser cladding of nickel-based superalloy, a process that combines the advantages of a near net-shape manufacturing and a close control of the solidification microstructure (E-LMF: epitaxial laser metal forming). PMID:10483877

  2. Field studies in geophysical diffraction tomography

    SciTech Connect

    Witten, A.J.; Stevens, S.S.; King, W.C.; Ursic, J.R.

    1992-07-01

    Geophysical diffraction tomography (GDT) is a quantitative, high- resolution technique for subsurface imaging. This method has been used in a number of shallow applications to image buried waste, trenches, soil strata, tunnels, synthetic magma chambers, and the buried skeletal remains of seismosaurus, the longest dinosaur ever discovered. The theory associated with the GDT inversion and implementing software have been developed for acoustic and scalar electromagnetic waves for bistatic and monostatic measurements in cross-borehole, offset vertical seismic profiling and reflection geometries. This paper presents an overview of some signal processing algorithms, a description of the instrumentation used in field studies, and selected imaging results.

  3. Field studies in geophysical diffraction tomography

    SciTech Connect

    Witten, A.J.; Stevens, S.S. ); King, W.C. . Dept. of Geography and Environmental Engineering); Ursic, J.R. . Region V)

    1992-01-01

    Geophysical diffraction tomography (GDT) is a quantitative, high- resolution technique for subsurface imaging. This method has been used in a number of shallow applications to image buried waste, trenches, soil strata, tunnels, synthetic magma chambers, and the buried skeletal remains of seismosaurus, the longest dinosaur ever discovered. The theory associated with the GDT inversion and implementing software have been developed for acoustic and scalar electromagnetic waves for bistatic and monostatic measurements in cross-borehole, offset vertical seismic profiling and reflection geometries. This paper presents an overview of some signal processing algorithms, a description of the instrumentation used in field studies, and selected imaging results.

  4. Elastic and diffractive scattering at D0

    SciTech Connect

    Edwards, Tamsin; /Manchester U.

    2004-04-01

    The first search for diffractively produced Z bosons in the muon decay channel is presented, using a data set collected by the D0 detector at the Fermilab Tevatron at {radical}s = 1.96 TeV between April and September 2003, corresponding to an integrated luminosity of approximately 110 pb{sup -1}. The first dN/d|t| distribution for proton-antiproton elastic scattering at this c.o.m. energy is also presented, using data collected by the D0 Forward Proton Detector between January and May 2002. The measured slope is reproduced by theoretical predictions.

  5. Aplanatic and quasi-aplanatic diffraction gratings

    DOEpatents

    Hettrick, M.C.

    1987-09-14

    A reflection diffraction grating having a series of transverse minute grooves of progressively varying spacing along a concave surface enables use of such gratings for x-ray or longer wavelength imaging of objects. The variable groove spacing establishes aplanatism or substantially uniform magnetification across the optical aperture. The grating may be sued, for example, in x-ray microscopes or telescopes of the imaging type and in x-ray microprobed. Increased spatial resolution and field of view may be realized in x-ray imaging. 5 figs.

  6. New approaches to nonlinear diffractive field propagation.

    PubMed

    Christopher, P T; Parker, K J

    1991-07-01

    In many domains of acoustic field propagation, such as medical ultrasound imaging, lithotripsy shock treatment, and underwater sonar, a realistic calculation of beam patterns requires treatment of the effects of diffraction from finite sources. Also, the mechanisms of loss and nonlinear effects within the medium are typically nonnegligible. The combination of diffraction, attenuation, and nonlinear effects has been treated by a number of formulations and numerical techniques. A novel model that incrementally propagates the field of baffled planar sources with substeps that account for the physics of diffraction, attenuation, and nonlinearity is presented. The model accounts for the effect of refraction and reflection (but not multiple reflections) in the case of propagation through multiple, parallel layers of fluid medium. An implementation of the model for axis symmetric sources has been developed. In one substep of the implementation, a new discrete Hankel transform is used with spatial transform techniques to propagate the field over a short distance with diffraction and attenuation. In the other substep, the temporal frequency domain solution to Burgers' equation is implemented to account for the nonlinear accretion and depletion of harmonics. This approach yields a computationally efficient procedure for calculating beam patterns from a baffled planar, axially symmetric source under conditions ranging from quasilinear through shock. The model is not restricted by the usual parabolic wave approximation and the field's directionality is explicitly accounted for at each point. Useage of a harmonic-limiting scheme allows the model to propagate some previously intractable high-intensity nonlinear fields. Results of the model are shown to be in excellent agreement with measurements performed on the nonlinear field of an unfocused 2.25-MHz piston source, even in the near field where the established parabolic wave approximation model fails. Next, the model is used to

  7. Crystallographic orientation assessment by electron backscattered diffraction.

    PubMed

    Cléton, F; Jouneau, P H; Henry, S; Gäumann, M; Buffat, P A

    1999-01-01

    With an angular orientation accuracy of at least 1 , the ability of electron backscattered diffraction (EBSD) to determine and emphasise crystallographic orientation is illustrated. Using the abilities of specially developed software for computing Euler angles derived from the scanned specimen, misorientations are pointed out with acceptable flexibility and graphic output through crystallographic orientation maps or pole figures. This ability is displayed in the particular case of laser cladding of nickel-based superalloy, a process that combines the advantages of a near net-shape manufacturing and a close control of the solidification microstructure (E-LMF: epitaxial laser metal forming).

  8. Aplanatic and quasi-aplanatic diffraction gratings

    DOEpatents

    Hettrick, Michael C.

    1989-01-01

    A reflection diffraction grating having a series of transverse minute grooves of progressively varying spacing along a concave surface enables use of such gratings for X-ray or longer wavelength imaging of objects. The variable groove spacing establishes aplanatism or substantially uniform magnification across the optical aperture. The grating may be used, for example, in X-ray microscopes or telescopes of the imaging type and in X-ray microprobes. Increased spatial resolution and field of view may be realized in X-ray imaging.

  9. Phase-shifting point diffraction interferometer grating designs

    DOEpatents

    Naulleau, Patrick; Goldberg, Kenneth Alan; Tejnil, Edita

    2001-01-01

    In a phase-shifting point diffraction interferometer, by sending the zeroth-order diffraction to the reference pinhole of the mask and the first-order diffraction to the test beam window of the mask, the test and reference beam intensities can be balanced and the fringe contrast improved. Additionally, using a duty cycle of the diffraction grating other than 50%, the fringe contrast can also be improved.

  10. Design of dense transmission diffraction gratings for high efficiency.

    PubMed

    Golub, Michael A

    2015-01-01

    We propose a design method for dense surface-relief diffraction gratings with high efficiency in transmission mode. Closed-form analytical relations between diffraction efficiency, polarization, and grating parameters are derived and verified in the resonance domain of diffraction under general three-dimensional angles of incidence traditionally termed conical mounting. A powerful tool for rigorous design of computer-generated holograms and diffractive optical elements with spectroscopic scale periods is now enabled.

  11. Décontamination nucléaire par laser UV

    NASA Astrophysics Data System (ADS)

    Delaporte, Ph.; Gastaud, M.; Marine, W.; Sentis, M.; Uteza, O.; Thouvenot, P.; Alcaraz, J. L.; Le Samedy, J. M.; Blin, D.

    2003-06-01

    Le développement et l'utilisation de procédés propres pour le nettoyage ou la préparation de surfaces est l'une des priorités du milieu industriel. Cet intérêt est d'autant plus grand dans le domaine du nucléaire pour lequel la réduction des déchets est un axe de recherche important. Un dispositif de décontamination nucléaire par laser UV impulsionnel a été développé et testé. Il est composé. d'un laser à excimères de 1kW, d'un faisceau de fibres optiques et d'un dispositif de récupération des particules. Les essais réalisés en milieu actif ont démontré sa capacité à nettoyer des surfaces métalliques polluées par différents radioéléments avec des facteurs de décontamination généralement supérieurs à 10. Ce dispositif permet de décontaminer de grandes surfaces de géométrie simple en réduisant fortement la génération de déchets secondaires. Il est, à ce jour et dans ces conditions d'utilisations, le procédé de décontamination par voie sèche le plus efficace.

  12. The structure of tellurite glass: A combined NMR, neutron diffraction, and x-ray diffraction study

    SciTech Connect

    McLaughlin, J. C.; Tagg, S. L.; Zwanzier, J. W.; Shastri, S. D.; Haeffner, D. R.

    2000-04-04

    Models are presented of sodium tellurite glasses in the composition range (Na{sub 2}0){sub x}-(TeO{sub 2}){sub 1{minus}x}. 0.1 < x < 0.3. The models combine self-consistently data from three different and complementary sources: sodium-23 nuclear magnetic resonance (NMR), neutron diffraction, and x-ray diffraction. The models were generated using the Reverse Monte Carlo algorithm, modified to include NMR data in addition to diffraction data. The presence in the models of all five tellurite polyhedra consistent with the Te{sup +4} oxidation state were found to be necessary to achieve agreement with the data. The distribution of polyhedra among these types varied from a predominance of highly bridged species at low sodium content, to polyhedra with one or zero bridging oxygen at high sodium content. The models indicate that the sodium cations themselves form sodium oxide clusters particularly at the x = 0.2 composition.

  13. Inflammation and Macular Oedema after Pars Plana Vitrectomy

    PubMed Central

    Romano, Vito; Angi, Martina; del Grosso, Renata; Romano, Davide; Vinciguerra, Paolo; Romano, Mario R.

    2013-01-01

    Cystoid macular oedema (CMO) is a major cause of reduced vision following intraocular surgery. Although the aetiology of CMO is not completely clarified, intraocular inflammation is known to play a major role in its development. The macula may develop cytotoxic oedema when the primary lesion and fluid accumulation occur in the parenchymatous cells (intracellular oedema) or vasogenic oedema when the primary defect occurs in the blood-retinal barrier and leads to extracellular fluid accumulation (extracellular oedema). We report on the mechanisms of CMO formation after pars plana vitrectomy and associated surgical procedures and discuss possible therapeutic approaches. PMID:24288446

  14. David Kasner, MD, and the Road to Pars Plana Vitrectomy.

    PubMed

    Blodi, Christopher F

    2016-01-01

    David Kasner, MD (1927-2001), used his extensive dissections of eye bank eyes and experiences in teaching cataract surgery to resident physicians to realize that excision of vitreous when present in the anterior chamber of eyes undergoing cataract surgery was preferable to prior intraoperative procedures. Noting that eyes tolerated his maneuvers, he then performed planned subtotal open-sky vitrectomies; first on a traumatized eye in 1961, then on two eyes of patients with amyloidosis (1966-1967). The success of these operations was noted by others, most particularly Robert Machemer, MD. Kasner's work directly led to further surgical developments, including closed pars plana vitrectomy. PMID:27660504

  15. BOREAS TE-12 Incoming PAR Through the Forest Canopy Data

    NASA Technical Reports Server (NTRS)

    Hall, Forrest G. (Editor); Papagno, Andrea (Editor); Walter-Shea, Elizabeth A.; Mesarch, Mark A.

    2000-01-01

    The Boreal Ecosystem-Atmospheric Study (BOREAS) TE-12 (Terrestrial Ecology) team collected photosynthetically active radiation (PAR) data sets in support of its efforts to characterize and interpret information on shoot geometry, leaf optical properties, leaf water potential, and leaf gas exchange. The data were collected at the Southern Study Area-Old Black Spruce (SSA-OBS) site from 04-Jul-1996 to 25-Jul-1996. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  16. David Kasner, MD, and the Road to Pars Plana Vitrectomy

    PubMed Central

    Blodi, Christopher F.

    2016-01-01

    David Kasner, MD (1927–2001), used his extensive dissections of eye bank eyes and experiences in teaching cataract surgery to resident physicians to realize that excision of vitreous when present in the anterior chamber of eyes undergoing cataract surgery was preferable to prior intraoperative procedures. Noting that eyes tolerated his maneuvers, he then performed planned subtotal open-sky vitrectomies; first on a traumatized eye in 1961, then on two eyes of patients with amyloidosis (1966–1967). The success of these operations was noted by others, most particularly Robert Machemer, MD. Kasner’s work directly led to further surgical developments, including closed pars plana vitrectomy. PMID:27660504

  17. David Kasner, MD, and the Road to Pars Plana Vitrectomy

    PubMed Central

    Blodi, Christopher F.

    2016-01-01

    David Kasner, MD (1927–2001), used his extensive dissections of eye bank eyes and experiences in teaching cataract surgery to resident physicians to realize that excision of vitreous when present in the anterior chamber of eyes undergoing cataract surgery was preferable to prior intraoperative procedures. Noting that eyes tolerated his maneuvers, he then performed planned subtotal open-sky vitrectomies; first on a traumatized eye in 1961, then on two eyes of patients with amyloidosis (1966–1967). The success of these operations was noted by others, most particularly Robert Machemer, MD. Kasner’s work directly led to further surgical developments, including closed pars plana vitrectomy.

  18. In-situ mechanical testing during X-ray diffraction

    SciTech Connect

    Van Swygenhoven, Helena Van Petegem, Steven

    2013-04-15

    Deforming metals during recording X-ray diffraction patterns is a useful tool to get a deeper understanding of the coupling between microstructure and mechanical behaviour. With the advances in flux, detector speed and focussing techniques at synchrotron facilities, in-situ mechanical testing is now possible during powder diffraction and Laue diffraction. The basic principle is explained together with illustrative examples.

  19. Chirality determination of quartz crystals using electron backscatter diffraction.

    PubMed

    Winkelmann, Aimo; Nolze, Gert

    2015-02-01

    We demonstrate the determination of crystal chirality using electron backscatter diffraction (EBSD) in the scanning electron microscope. The chirality of α-quartz as a space-group-dependent property is verified via direct comparison of experimental diffraction features to simulations using the dynamical theory of electron diffraction.

  20. Fraunhofer Diffraction Effects on Total Power for a Planckian Source.

    PubMed

    Shirley, E L

    2001-01-01

    An algorithm for computing diffraction effects on total power in the case of Fraunhofer diffraction by a circular lens or aperture is derived. The result for Fraunhofer diffraction of monochromatic radiation is well known, and this work reports the result for radiation from a Planckian source. The result obtained is valid at all temperatures.

  1. Spider diffraction: a comparison of curved and straight legs

    SciTech Connect

    Richter, J.L.

    1984-06-15

    It has been known for some time that, if curved legs rather than the usual straight ones are used in the spider that supports the secondary optics in certain telescopes, the visible diffraction effect is reduced. Fraunhofer theory is used to calculate the diffraction effects due to the curved leg spider. Calculated and photographic diffraction patterns are compared for straight and curved leg spiders.

  2. Fresnel Diffraction Using a He-Ne Gas Laser

    ERIC Educational Resources Information Center

    Moen, Allen L.; Vander Meulen, David L.

    1970-01-01

    Describes an advanced laboratory experiment of Fresnel diffraction which uses a He-Ne gas laser as the source and a wire as the opaque diffracting strip. A photograph of the diffraction pattern is compared with the intensity diagram predicted by the Cornu spiral method. Agreement is clear and impressive, although minor differences are detectable.…

  3. High diffraction efficiency of three-layer diffractive optics designed for wide temperature range and large incident angle.

    PubMed

    Mao, Shan; Cui, Qingfeng; Piao, Mingxu; Zhao, Lidong

    2016-05-01

    A mathematical model of diffraction efficiency and polychromatic integral diffraction efficiency affected by environment temperature change and incident angle for three-layer diffractive optics with different dispersion materials is put forward, and its effects are analyzed. Taking optical materials N-FK5 and N-SF1 as the substrates of multilayer diffractive optics, the effect on diffraction efficiency and polychromatic integral diffraction efficiency with intermediate materials POLYCARB is analyzed with environment temperature change as well as incident angle. Therefore, three-layer diffractive optics can be applied in more wide environmental temperature ranges and larger incident angles for refractive-diffractive hybrid optical systems, which can obtain better image quality. Analysis results can be used to guide the hybrid imaging optical system design for optical engineers.

  4. Inversion of diffraction data for amorphous materials

    PubMed Central

    Pandey, Anup; Biswas, Parthapratim; Drabold, D. A.

    2016-01-01

    The general and practical inversion of diffraction data–producing a computer model correctly representing the material explored–is an important unsolved problem for disordered materials. Such modeling should proceed by using our full knowledge base, both from experiment and theory. In this paper, we describe a robust method to jointly exploit the power of ab initio atomistic simulation along with the information carried by diffraction data. The method is applied to two very different systems: amorphous silicon and two compositions of a solid electrolyte memory material silver-doped GeSe3. The technique is easy to implement, is faster and yields results much improved over conventional simulation methods for the materials explored. By direct calculation, we show that the method works for both poor and excellent glass forming materials. It offers a means to add a priori information in first-principles modeling of materials, and represents a significant step toward the computational design of non-crystalline materials using accurate interatomic interactions and experimental information. PMID:27652893

  5. Synchrotron powder diffraction on Aztec blue pigments

    NASA Astrophysics Data System (ADS)

    Sánchez Del Río, M.; Gutiérrez-León, A.; Castro, G. R.; Rubio-Zuazo, J.; Solís, C.; Sánchez-Hernández, R.; Robles-Camacho, J.; Rojas-Gaytán, J.

    2008-01-01

    Some samples of raw blue pigments coming from an archaeological rescue mission in downtown Mexico City have been characterized using different techniques. The samples, some recovered as a part of a ritual offering, could be assigned to the late Aztec period (XVth century). The striking characteristic of these samples is that they seem to be raw pigments prior to any use in artworks, and it was possible to collect a few μg of pigment after manual grain selection under a microscopy monitoring. All pigments are made of indigo, an organic colorant locally known as añil or xiuhquilitl. The colorant is always found in combination with an inorganic matrix, studied by powder diffraction. In one case the mineral base is palygorskite, a rare clay mineral featuring micro-channels in its structure, well known as the main ingredient of the Maya blue pigment. However, other samples present the minerals sepiolite (a clay mineral of the palygorskite family) and calcite. Another sample contains barite, a mineral never reported in prehispanic paints. We present the results of characterization using high resolution powder diffraction recorded at the European Synchrotron Radiation Facility (BM25A, SpLine beamline) complemented with other techniques. All of them gave consistent results on the composition. A chemical test on resistance to acids was done, showing a high resistance for the palygorskite and eventually sepiolite compounds, in good agreement with the excellent resistance of the Maya blue.

  6. On the Diffraction Limit for Lensless Imaging

    PubMed Central

    Mielenz, Klaus D.

    1999-01-01

    The diffraction limit for lensless imaging, defined as the sharpest possible point image obtainable with a pinhole aperture, is analyzed and compared to the corresponding limit for imaging with lenses by means of theoretical considerations and numerical computations using the Fresnel-Lommel diffraction theory for circular apertures. The numerical result (u = π) obtained for the best configuration parameter u which defines the optical setup is consistent with the quarter-wave criterion, and is the same as the value reported in a classical paper by Petzval but smaller than the value (u = 1.8π) found by Lord Rayleigh. The smallest discernible detail (pixel) in a composite image is defined by an expression found by Rayleigh on applying the half-wave criterion and is shown to be consistent with the Sparrow criterion of resolution. The numerical values of other measures of image size are reported and compared to equivalent parameters of the Fraunhofer-Airy profile that governs imaging with lenses.

  7. NOTES ON EXPERIMENTS: Diffraction demonstration on television

    NASA Astrophysics Data System (ADS)

    Kruglak, Haym

    1989-11-01

    The experimental arrangement of a previous note (see ibid., vol.23, p.306 (1988) and see Phys. Teach. vol.26, p.157 (1988)) can be used for displaying diffraction patterns on a TV monitor. The relevant apparatus is shown and latex microspheres, available from scientific supply houses, are projected with a microscope onto a TV monitor. One drop of the latex concentrate is diluted with 25-50 ml of H2O. The cavity of a depression slide is filled with the suspension. A cover glass is placed over the cavity, the excess liquid wiped off and the edges of the cover seated with nail polish. The lens of the TV camera is removed and replaced with a 10-15 cm metal or cardboard tube. The eyepiece of the microscope is also removed. With a 20× objective and a 50-60 cm distance between the bottom of the camera and the microscope stage, the image diameters of the microspheres on the monitor screen are 1-2 cm in diameter. The Fresnel diffraction bands around 1.1 μm latex microspheres are shown.

  8. Neutron diffraction studies of viral fusion peptides

    NASA Astrophysics Data System (ADS)

    Bradshaw, Jeremy P.; J. M. Darkes, Malcolm; Katsaras, John; Epand, Richard M.

    2000-03-01

    Membrane fusion plays a vital role in a large and diverse number of essential biological processes. Despite this fact, the precise molecular events that occur during fusion are still not known. We are currently engaged on a study of membrane fusion as mediated by viral fusion peptides. These peptides are the N-terminal regions of certain viral envelope proteins that mediate the process of fusion between the viral envelope and the membranes of the host cell during the infection process. As part of this study, we have carried out neutron diffraction measurements at the ILL, BeNSC and Chalk River, on a range of viral fusion peptides. The peptides, from simian immunodeficiency virus (SIV), influenza A and feline leukaemia virus (FeLV), were incorporated into stacked phospholipid bilayers. Some of the peptides had been specifically deuterated at key amino acids. Lamellar diffraction data were collected and analysed to yield information on the peptide conformation, location and orientation relative to the bilayer.

  9. LED color mixing with diffractive structures

    NASA Astrophysics Data System (ADS)

    Bonenberger, Theresa; Baumgart, Jörg; Wendel, Simon; Neumann, Cornelius

    2013-03-01

    Lighting solutions with colored LEDs provide many opportunities for illumination. One of these opportunities is to create a color tunable light source. In this way different kinds of white light (color temperature) as well as discrete colors may be realized. This opens the field for applications as mood lighting. But there is always a spatial separation of the distinct LEDs that might get converted into an angular separation by any collimating optics. This angular separation causes such problems like color fringes and colored shadows that cannot be accepted in most applications. Conventional methods to solve these problems include e.g. mixing rods or dichroic filters. A new approach is the use of the dispersive effect of a diffractive structure to compensate the angular separation of the different colors. In this contribution the potential and limitations of diffractive structures in LED color mixing applications are discussed. Ray tracing simulations were performed to analyze such important parameters like efficiency, color performance and the cross section of the color mixing optics. New means for the estimation of color mixing performance were developed. A software tool makes it possible to detect the color distribution within ray trace data and it provides a quality factor to estimate the color mixing performance. It can be shown that the spectral band width has a large influence on the mixing process. Ray tracing simulations are compared with results of an experimental setup such that both measured as well as simulated data is presented.

  10. Growing Larger Crystals for Neutron Diffraction

    NASA Technical Reports Server (NTRS)

    Pusey, Marc

    2003-01-01

    Obtaining crystals of suitable size and high quality has been a major bottleneck in macromolecular crystallography. With the advent of advanced X-ray sources and methods the question of size has rapidly dwindled, almost to the point where if one can see the crystal then it was big enough. Quality is another issue, and major national and commercial efforts were established to take advantage of the microgravity environment in an effort to obtain higher quality crystals. Studies of the macromolecule crystallization process were carried out in many labs in an effort to understand what affected the resultant crystal quality on Earth, and how microgravity improved the process. While technological improvements are resulting in a diminishing of the minimum crystal size required, neutron diffraction structural studies still require considerably larger crystals, by several orders of magnitude, than X-ray studies. From a crystal growth physics perspective there is no reason why these 'large' crystals cannot be obtained: the question is generally more one of supply than limitations mechanism. This talk will discuss our laboratory s current model for macromolecule crystal growth, with highlights pertaining to the growth of crystals suitable for neutron diffraction studies.

  11. Inversion of diffraction data for amorphous materials

    NASA Astrophysics Data System (ADS)

    Pandey, Anup; Biswas, Parthapratim; Drabold, D. A.

    2016-09-01

    The general and practical inversion of diffraction data–producing a computer model correctly representing the material explored–is an important unsolved problem for disordered materials. Such modeling should proceed by using our full knowledge base, both from experiment and theory. In this paper, we describe a robust method to jointly exploit the power of ab initio atomistic simulation along with the information carried by diffraction data. The method is applied to two very different systems: amorphous silicon and two compositions of a solid electrolyte memory material silver-doped GeSe3. The technique is easy to implement, is faster and yields results much improved over conventional simulation methods for the materials explored. By direct calculation, we show that the method works for both poor and excellent glass forming materials. It offers a means to add a priori information in first-principles modeling of materials, and represents a significant step toward the computational design of non-crystalline materials using accurate interatomic interactions and experimental information.

  12. Crystal diffraction lens for medical imaging

    SciTech Connect

    Smither, R. K.; Roa, D. E.

    2000-02-25

    A crystal diffraction lens for focusing energetic gamma rays has been developed at Argonne National Laboratory for use in medical imaging of radioactivity in the human body. A common method for locating possible cancerous growths in the body is to inject radioactivity into the blood stream of the patient and then look for any concentration of radioactivity that could be associated with the fast growing cancer cells. Often there are borderline indications of possible cancers that could be due to statistical functions in the measured counting rates. In order to determine if these indications are false or real, one must resort to surgical means and take tissue samples in the suspect area. They are developing a system of crystal diffraction lenses that will be incorporated into a 3-D imaging system with better sensitivity (factors of 10 to 100) and better spatial resolution (a few mm in both vertical and horizontal directions) than most systems presently in use. The use of this new imaging system will allow one to eliminate 90% of the false indications and both locate and determine the size of the cancer with mm precision. The lens consists of 900 single crystals of copper, 4 mm x 4 mm on a side and 2--4 mm thick, mounted in 13 concentric rings.

  13. Detonation diffraction from an annular channel

    NASA Astrophysics Data System (ADS)

    Meredith, James; Ng, Hoi Dick; Lee, John H. S.

    2010-12-01

    In this study, gaseous detonation diffraction from an annular channel was investigated with a streak camera and the critical pressure for transmission of the detonation wave was obtained. The annular channel was used to approximate an infinite slot resulting in cylindrically expanding detonation waves. Two mixtures, stoichiometric acetylene-oxygen and stoichiometric acetylene-oxygen with 70% Ar dilution, were tested in a 4.3 and 14.3 mm channel width ( W). The undiluted and diluted mixtures were found to have values of the critical channel width over the cell size around 3 and 12 respectively. Comparing these results to values of the critical diameter ( d c ), in which a spherical detonation occurs, a value of critical d c / W c near 2 is observed for the highly diluted mixture. This value corresponds to the geometrical factor of the curvature term between a spherical and cylindrical diverging wave. Hence, the result is in support of Lee's proposed mechanism [Lee in Dynamics of Exothermicity, pp. 321, Gordon and Breach, Amsterdam, 1996] for failure due to diffraction based on curvature in stable mixtures such as those highly argon diluted with very regular detonation cellular patterns.

  14. Printing colour at the optical diffraction limit.

    PubMed

    Kumar, Karthik; Duan, Huigao; Hegde, Ravi S; Koh, Samuel C W; Wei, Jennifer N; Yang, Joel K W

    2012-09-01

    The highest possible resolution for printed colour images is determined by the diffraction limit of visible light. To achieve this limit, individual colour elements (or pixels) with a pitch of 250 nm are required, translating into printed images at a resolution of ∼100,000 dots per inch (d.p.i.). However, methods for dispensing multiple colourants or fabricating structural colour through plasmonic structures have insufficient resolution and limited scalability. Here, we present a non-colourant method that achieves bright-field colour prints with resolutions up to the optical diffraction limit. Colour information is encoded in the dimensional parameters of metal nanostructures, so that tuning their plasmon resonance determines the colours of the individual pixels. Our colour-mapping strategy produces images with both sharp colour changes and fine tonal variations, is amenable to large-volume colour printing via nanoimprint lithography, and could be useful in making microimages for security, steganography, nanoscale optical filters and high-density spectrally encoded optical data storage.

  15. Platelet Specific Promoters Are Insufficient to Express Protease Activated Receptor 1 (PAR1) Transgene in Mouse Platelets

    PubMed Central

    Arachiche, Amal; de la Fuente, María; Nieman, Marvin T.

    2014-01-01

    The in vivo study of protease activated receptors (PARs) in platelets is complicated due to species specific expression profiles. Human platelets express PAR1 and PAR4 whereas mouse platelets express PAR3 and PAR4. Further, PAR subtypes interact with one another to influence activation and signaling. The goal of the current study was to generate mice expressing PAR1 on their platelets using transgenic approaches to mimic PAR expression found in human platelets. This system would allow us to examine specific signaling from PAR1 and the PAR1-PAR4 heterodimer in vivo. Our first approach used the mouse GPIbα promoter to drive expression of mouse PAR1 in platelets (GPIbα-Tg-mPAR1). We obtained the expected frequency of founders carrying the transgene and had the expected Mendelian distribution of the transgene in multiple founders. However, we did not observe expression or a functional response of PAR1. As a second approach, we targeted human PAR1 with the same promoter (GPIbα-Tg-hPAR1). Once again we observed the expected frequency and distributing of the transgene. Human PAR1 expression was detected in platelets from the GPIbα-Tg-hPAR1 mice by flow cytometry, however, at a lower level than for human platelets. Despite a low level of PAR1 expression, platelets from the GPIbα-Tg-hPAR1 mice did not respond to the PAR1 agonist peptide (SFLLRN). In addition, they did not respond to thrombin when crossed to the PAR4−/− mice. Finally, we used an alternative platelet specific promoter, human αIIb, to express human PAR1 (αIIb-Tg-hPAR1). Similar to our previous attempts, we obtained the expected number of founders but did not detect PAR1 expression or response in platelets from αIIb-Tg-hPAR1 mice. Although unsuccessful, the experiments described in this report provide a resource for future efforts in generating mice expressing PAR1 on their platelets. We provide an experimental framework and offer considerations that will save time and research funds. PMID:24830314

  16. Platelet specific promoters are insufficient to express protease activated receptor 1 (PAR1) transgene in mouse platelets.

    PubMed

    Arachiche, Amal; de la Fuente, María; Nieman, Marvin T

    2014-01-01

    The in vivo study of protease activated receptors (PARs) in platelets is complicated due to species specific expression profiles. Human platelets express PAR1 and PAR4 whereas mouse platelets express PAR3 and PAR4. Further, PAR subtypes interact with one another to influence activation and signaling. The goal of the current study was to generate mice expressing PAR1 on their platelets using transgenic approaches to mimic PAR expression found in human platelets. This system would allow us to examine specific signaling from PAR1 and the PAR1-PAR4 heterodimer in vivo. Our first approach used the mouse GPIbα promoter to drive expression of mouse PAR1 in platelets (GPIbα-Tg-mPAR1). We obtained the expected frequency of founders carrying the transgene and had the expected Mendelian distribution of the transgene in multiple founders. However, we did not observe expression or a functional response of PAR1. As a second approach, we targeted human PAR1 with the same promoter (GPIbα-Tg-hPAR1). Once again we observed the expected frequency and distributing of the transgene. Human PAR1 expression was detected in platelets from the GPIbα-Tg-hPAR1 mice by flow cytometry, however, at a lower level than for human platelets. Despite a low level of PAR1 expression, platelets from the GPIbα-Tg-hPAR1 mice did not respond to the PAR1 agonist peptide (SFLLRN). In addition, they did not respond to thrombin when crossed to the PAR4-/- mice. Finally, we used an alternative platelet specific promoter, human αIIb, to express human PAR1 (αIIb-Tg-hPAR1). Similar to our previous attempts, we obtained the expected number of founders but did not detect PAR1 expression or response in platelets from αIIb-Tg-hPAR1 mice. Although unsuccessful, the experiments described in this report provide a resource for future efforts in generating mice expressing PAR1 on their platelets. We provide an experimental framework and offer considerations that will save time and research funds. PMID:24830314

  17. Estimating Photosynthetically Available Radiation (PAR) at the Earth's surface from satellite observations

    NASA Technical Reports Server (NTRS)

    Frouin, Robert

    1993-01-01

    Current satellite algorithms to estimate photosynthetically available radiation (PAR) at the earth' s surface are reviewed. PAR is deduced either from an insolation estimate or obtained directly from top-of-atmosphere solar radiances. The characteristics of both approaches are contrasted and typical results are presented. The inaccuracies reported, about 10 percent and 6 percent on daily and monthly time scales, respectively, are useful to model oceanic and terrestrial primary productivity. At those time scales variability due to clouds in the ratio of PAR and insolation is reduced, making it possible to deduce PAR directly from insolation climatologies (satellite or other) that are currently available or being produced. Improvements, however, are needed in conditions of broken cloudiness and over ice/snow. If not addressed properly, calibration/validation issues may prevent quantitative use of the PAR estimates in studies of climatic change. The prospects are good for an accurate, long-term climatology of PAR over the globe.

  18. Emerging Beam Resonances in Atom Diffraction from a Reflection Grating

    SciTech Connect

    Zhao, Bum Suk; Meijer, Gerard; Schoellkopf, Wieland

    2010-06-18

    We report on the observation of emerging beam resonances, well known as Rayleigh-Wood anomalies and threshold resonances in photon and electron diffraction, respectively, in an atom-optical diffraction experiment. Diffraction of He atom beams reflected from a blazed ruled grating at grazing incidence has been investigated. The total reflectivity of the grating as well as the intensities of the diffracted beams reveal anomalies at the Rayleigh angles of incidence, i.e., when another diffracted beam emerges parallel to the grating surface. The observed anomalies are discussed in terms of the classical wave-optical model of Rayleigh and Fano.

  19. Kinematic diffraction is insufficient to distinguish order from disorder

    NASA Astrophysics Data System (ADS)

    Baake, Michael; Grimm, Uwe

    2009-01-01

    Diffraction methods are at the heart of structure determination of solids. While Bragg-type scattering (pure point diffraction) is a characteristic feature of crystals and quasicrystals, it is not straightforward to interpret continuous diffraction intensities, which are generally linked to the presence of disorder. However, based on simple model systems, we demonstrate that it may be impossible to draw conclusions on the degree of order in the system from its diffraction image. In particular, we construct a family of one-dimensional binary systems which cover the entire entropy range but still share the same purely diffuse diffraction spectrum.

  20. Periodically patterned columnar thin films as blazed diffraction gratings

    SciTech Connect

    Dutta, Jhuma; Anantha Ramakrishna, S.; Lakhtakia, Akhlesh

    2013-04-22

    Periodically patterned columnar thin films (PP-CTFs) were made by evaporating CaF{sub 2} and directing the vapor flux obliquely towards lithographically fabricated micrometer/sub-micrometer gratings. The growth of the PP-CTFs was controlled by the deposition rate to form prismatic air cavities within them. These PP-CTFs function like blazed diffraction gratings with asymmetric diffraction patterns and diffraction efficiencies up to 80% in transmission at ultraviolet-visible wavelengths. Diffraction theory adequately establishes that the blazing action arises due to the prismatic cavities and explains the measured diffraction efficiencies.

  1. Spin-dependent diffraction of evanescent waves by subwavelength gratings.

    PubMed

    Wu, Kedi; Wang, Guo Ping

    2015-08-15

    We present a way to observe the spin-to-orbital conversion phenomenon. A spinning evanescent wave can be asymmetrically transformed into propagation waves through one certain diffraction order by a periodical subwavelength grating. By detecting diffraction field distribution behind the grating, we observed spin-dependent diffraction patterns. Furthermore, replacing the periodical grating by a Fibonacci grating, we can simultaneously observe multiple order diffractions of a spin evanescent wave. In this case, the multiple diffraction beams can interfere with each other behind the quasi-periodical grating to form asymmetric interference patterns. Our work provides another way toward the realization of spin-to-orbital conversion of light. PMID:26274640

  2. Optical-diffraction method for determining crystal orientation

    DOEpatents

    Sopori, B.L.

    1982-05-07

    Disclosed is an optical diffraction technique for characterizing the three-dimensional orientation of a crystal sample. An arbitrary surface of the crystal sample is texture etched so as to generate a pseudo-periodic diffraction grating on the surface. A laser light beam is then directed onto the etched surface, and the reflected light forms a farfield diffraction pattern in reflection. Parameters of the diffraction pattern, such as the geometry and angular dispersion of the diffracted beam are then related to grating shape of the etched surface which is in turn related to crystal orientation. This technique may be used for examining polycrystalline silicon for use in solar cells.

  3. The PARA-suite: PAR-CLIP specific sequence read simulation and processing

    PubMed Central

    Kloetgen, Andreas; Borkhardt, Arndt; Hoell, Jessica I.

    2016-01-01

    Background Next-generation sequencing technologies have profoundly impacted biology over recent years. Experimental protocols, such as photoactivatable ribonucleoside-enhanced cross-linking and immunoprecipitation (PAR-CLIP), which identifies protein–RNA interactions on a genome-wide scale, commonly employ deep sequencing. With PAR-CLIP, the incorporation of photoactivatable nucleosides into nascent transcripts leads to high rates of specific nucleotide conversions during reverse transcription. So far, the specific properties of PAR-CLIP-derived sequencing reads have not been assessed in depth. Methods We here compared PAR-CLIP sequencing reads to regular transcriptome sequencing reads (RNA-Seq) to identify distinctive properties that are relevant for reference-based read alignment of PAR-CLIP datasets. We developed a set of freely available tools for PAR-CLIP data analysis, called the PAR-CLIP analyzer suite (PARA-suite). The PARA-suite includes error model inference, PAR-CLIP read simulation based on PAR-CLIP specific properties, a full read alignment pipeline with a modified Burrows–Wheeler Aligner algorithm and CLIP read clustering for binding site detection. Results We show that differences in the error profiles of PAR-CLIP reads relative to regular transcriptome sequencing reads (RNA-Seq) make a distinct processing advantageous. We examine the alignment accuracy of commonly applied read aligners on 10 simulated PAR-CLIP datasets using different parameter settings and identified the most accurate setup among those read aligners. We demonstrate the performance of the PARA-suite in conjunction with different binding site detection algorithms on several real PAR-CLIP and HITS-CLIP datasets. Our processing pipeline allowed the improvement of both alignment and binding site detection accuracy. Availability The PARA-suite toolkit and the PARA-suite aligner are available at https://github.com/akloetgen/PARA-suite and https

  4. Biased signalling and proteinase-activated receptors (PARs): targeting inflammatory disease

    PubMed Central

    Hollenberg, M D; Mihara, K; Polley, D; Suen, J Y; Han, A; Fairlie, D P; Ramachandran, R

    2014-01-01

    Although it has been known since the 1960s that trypsin and chymotrypsin can mimic hormone action in tissues, it took until the 1990s to discover that serine proteinases can regulate cells by cleaving and activating a unique four-member family of GPCRs known as proteinase-activated receptors (PARs). PAR activation involves the proteolytic exposure of its N-terminal receptor sequence that folds back to function as a ‘tethered’ receptor-activating ligand (TL). A key N-terminal arginine in each of PARs 1 to 4 has been singled out as a target for cleavage by thrombin (PARs 1, 3 and 4), trypsin (PARs 2 and 4) or other proteases to unmask the TL that activates signalling via Gq, Gi or G12/13. Similarly, synthetic receptor-activating peptides, corresponding to the exposed ‘TL sequences’ (e.g. SFLLRN—, for PAR1 or SLIGRL— for PAR2) can, like proteinase activation, also drive signalling via Gq, Gi and G12/13, without requiring receptor cleavage. Recent data show, however, that distinct proteinase-revealed ‘non-canonical’ PAR tethered-ligand sequences and PAR-activating agonist and antagonist peptide analogues can induce ‘biased’ PAR signalling, for example, via G12/13-MAPKinase instead of Gq-calcium. This overview summarizes implications of this ‘biased’ signalling by PAR agonists and antagonists for the recognized roles the PARs play in inflammatory settings. Linked ArticlesThis article is part of a themed section on Molecular Pharmacology of GPCRs. To view the other articles in this section visit http://dx.doi.org/10.1111/bph.2014.171.issue-5 PMID:24354792

  5. PhyloPars: estimation of missing parameter values using phylogeny.

    PubMed

    Bruggeman, Jorn; Heringa, Jaap; Brandt, Bernd W

    2009-07-01

    A wealth of information on metabolic parameters of a species can be inferred from observations on species that are phylogenetically related. Phylogeny-based information can complement direct empirical evidence, and is particularly valuable if experiments on the species of interest are not feasible. The PhyloPars web server provides a statistically consistent method that combines an incomplete set of empirical observations with the species phylogeny to produce a complete set of parameter estimates for all species. It builds upon a state-of-the-art evolutionary model, extended with the ability to handle missing data. The resulting approach makes optimal use of all available information to produce estimates that can be an order of magnitude more accurate than ad-hoc alternatives. Uploading a phylogeny and incomplete feature matrix suffices to obtain estimates of all missing values, along with a measure of certainty. Real-time cross-validation provides further insight in the accuracy and bias expected for estimated values. The server allows for easy, efficient estimation of metabolic parameters, which can benefit a wide range of fields including systems biology and ecology. PhyloPars is available at: http://www.ibi.vu.nl/programs/phylopars/.

  6. Imagerie 2D et 3D de matériaux monocristallins : topographie et tomographie en diffraction rayons X de très haute énergie

    NASA Astrophysics Data System (ADS)

    Hamelin, B.; Bastie, P.; Richard, D.; Eiaazzouzi, A.

    2004-11-01

    La caractérisation en volume de matériaux cristallins de forte épaisseur (plusieurs cm) n'est possible que par l'utilisation de sources de rayonnement X de forte énergie (diffractomètres gamma, lignes haute énergie du rayonnement synchrotron) ou encore par l'utilisation de faisceau de neutrons. L'Institut Laue Langevin a développé et construit, en coopération avec le Laboratoire de Spectrométrie Physique, un nouveau type d'instrument utilisant le spectre continu rayons X à très haute énergie (typiquement 100 à 400 keV) émis par un générateur rayons X à foyer fin utilisé pour des radiographies. Ce diffractomètre permet la caractérisation rapide, précise et en volume d'échantillons de forte épaisseur. Outre des applications variées dans différents domaines (structure cristalline, mesure de paramètre de maille, contraintes, textures,ldots), il est possible de caractériser complètement des échantillons cristallins à partir d'une série de mesures en diffraction. Il est en particulier possible de visualiser (localiser) les désorientations du réseau cristallin au sein d'un échantillon (topographie en transmission). Il est également possible de visualiser les volumes diffractants dans une section de l'échantillon en utilisant une reconstruction de type tomographique à partir d'une série d'acquisitions en diffraction. Ces nouvelles possibilités s'avèrent être particulièrement utiles pour le contrôle non destructif de matériaux cristallins.

  7. Interlaced X-ray diffraction computed tomography

    PubMed Central

    Vamvakeros, Antonios; Jacques, Simon D. M.; Di Michiel, Marco; Senecal, Pierre; Middelkoop, Vesna; Cernik, Robert J.; Beale, Andrew M.

    2016-01-01

    An X-ray diffraction computed tomography data-collection strategy that allows, post experiment, a choice between temporal and spatial resolution is reported. This strategy enables time-resolved studies on comparatively short timescales, or alternatively allows for improved spatial resolution if the system under study, or components within it, appear to be unchanging. The application of the method for studying an Mn–Na–W/SiO2 fixed-bed reactor in situ is demonstrated. Additionally, the opportunities to improve the data-collection strategy further, enabling post-collection tuning between statistical, temporal and spatial resolutions, are discussed. In principle, the interlaced scanning approach can also be applied to other pencil-beam tomographic techniques, like X-ray fluorescence computed tomography, X-ray absorption fine structure computed tomography, pair distribution function computed tomography and tomographic scanning transmission X-ray microscopy. PMID:27047305

  8. Bayesian inversion for optical diffraction tomography

    NASA Astrophysics Data System (ADS)

    Ayasso, H.; Duchêne, B.; Mohammad-Djafari, A.

    2010-05-01

    In this paper, optical diffraction tomography is considered as a non-linear inverse scattering problem and tackled within the Bayesian estimation framework. The object under test is a man-made object known to be composed of compact regions made of a finite number of different homogeneous materials. This a priori knowledge is appropriately translated by a Gauss-Markov-Potts prior. Hence, a Gauss-Markov random field is used to model the contrast distribution whereas a hidden Potts-Markov field accounts for the compactness of the regions. First, we express the a posteriori distributions of all the unknowns and then a Gibbs sampling algorithm is used to generate samples and estimate the posterior mean of the unknowns. Some preliminary results, obtained by applying the inversion algorithm to laboratory controlled data, are presented.

  9. Acoustic non-diffracting Airy beam

    SciTech Connect

    Lin, Zhou; Guo, Xiasheng Tu, Juan; Ma, Qingyu; Wu, Junru; Zhang, Dong

    2015-03-14

    The acoustic non-diffracting Airy beam as its optical counterpart has unique features of self-bending and self-healing. The complexity of most current designs handicaps its applications. A simple design of an acoustic source capable of generating multi-frequency and broad-band acoustic Airy beam has been theoretically demonstrated by numerical simulations. In the design, a piston transducer is corrugated to induce spatial phase variation for transducing the Airy function. The piston's surface is grooved in a pattern that the width of each groove corresponds to the half wavelength of Airy function. The resulted frequency characteristics and its dependence on the size of the piston source are also discussed. This simple design may promote the wide applications of acoustic Airy beam particularly in the field of medical ultrasound.

  10. Precession electron diffraction – a topical review

    PubMed Central

    Midgley, Paul A.; Eggeman, Alexander S.

    2015-01-01

    In the 20 years since precession electron diffraction (PED) was introduced, it has grown from a little-known niche technique to one that is seen as a cornerstone of electron crystallography. It is now used primarily in two ways. The first is to determine crystal structures, to identify lattice parameters and symmetry, and ultimately to solve the atomic structure ab initio. The second is, through connection with the microscope scanning system, to map the local orientation of the specimen to investigate crystal texture, rotation and strain at the nanometre scale. This topical review brings the reader up to date, highlighting recent successes using PED and providing some pointers to the future in terms of method development and how the technique can meet some of the needs of the X-ray crystallography community. Complementary electron techniques are also discussed, together with how a synergy of methods may provide the best approach to electron-based structure analysis. PMID:25610633

  11. Virtual input device with diffractive optical element

    NASA Astrophysics Data System (ADS)

    Wu, Ching Chin; Chu, Chang Sheng

    2005-02-01

    As a portable device, such as PDA and cell phone, a small size build in virtual input device is more convenient for complex input demand. A few years ago, a creative idea called 'virtual keyboard' is announced, but up to now there's still no mass production method for this idea. In this paper we'll show the whole procedure of making a virtual keyboard. First of all is the HOE (Holographic Optical Element) design of keyboard image which yields a fan angle about 30 degrees, and then use the electron forming method to copy this pattern in high precision. And finally we can product this element by inject molding. With an adaptive lens design we can get a well correct keyboard image in distortion and a wilder fan angle about 70 degrees. With a batter alignment of HOE pattern lithography, we"re sure to get higher diffraction efficiency.

  12. Neutron powder diffraction study of perdeuterodimethyl sulfone.

    PubMed

    Ibberson, R M

    2007-05-01

    The crystal structure of perdeuterodimethyl sulfone, (CD(3))(2)SO(2) or C(2)D(6)O(2)S, has been refined at 4.5 K against high-resolution neutron powder diffraction data. The structure determined previously by Sands [Z. Kristallogr. (1963), 119, 245-251] at ambient temperature is shown to remain down to liquid helium temperature, and at 4.5 K the S-C and S-O bond distances are 1.441 (2) and 1.760 (2) A, respectively. The molecules are distorted tetrahedra with C(2v) point symmetry (crystallographic symmetry m2m for S and m for C, O and one D atom) and are linked through a network of weak hydrogen bonds in the C-centred orthorhombic structure.

  13. Coherent diffractive imaging using randomly coded masks

    SciTech Connect

    Seaberg, Matthew H.; D'Aspremont, Alexandre; Turner, Joshua J.

    2015-12-07

    We experimentally demonstrate an extension to coherent diffractive imaging that encodes additional information through the use of a series of randomly coded masks, removing the need for typical object-domain constraints while guaranteeing a unique solution to the phase retrieval problem. Phase retrieval is performed using a numerical convex relaxation routine known as “PhaseCut,” an iterative algorithm known for its stability and for its ability to find the global solution, which can be found efficiently and which is robust to noise. The experiment is performed using a laser diode at 532.2 nm, enabling rapid prototyping for future X-ray synchrotron and even free electron laser experiments.

  14. Very Large Aperture Diffractive Space Telescope

    SciTech Connect

    Hyde, Roderick Allen

    1998-04-20

    A very large (10's of meters) aperture space telescope including two separate spacecraft--an optical primary functioning as a magnifying glass and an optical secondary functioning as an eyepiece. The spacecraft are spaced up to several kilometers apart with the eyepiece directly behind the magnifying glass ''aiming'' at an intended target with their relative orientation determining the optical axis of the telescope and hence the targets being observed. The magnifying glass includes a very large-aperture, very-thin-membrane, diffractive lens, e.g., a Fresnel lens, which intercepts incoming light over its full aperture and focuses it towards the eyepiece. The eyepiece has a much smaller, meter-scale aperture and is designed to move along the focal surface of the magnifying glass, gathering up the incoming light and converting it to high quality images. The positions of the two space craft are controlled both to maintain a good optical focus and to point at desired targets.

  15. Perturbation approach applied to modal diffraction methods.

    PubMed

    Bischoff, Joerg; Hehl, Karl

    2011-05-01

    Eigenvalue computation is an important part of many modal diffraction methods, including the rigorous coupled wave approach (RCWA) and the Chandezon method. This procedure is known to be computationally intensive, accounting for a large proportion of the overall run time. However, in many cases, eigenvalue information is already available from previous calculations. Some of the examples include adjacent slices in the RCWA, spectral- or angle-resolved scans in optical scatterometry and parameter derivatives in optimization. In this paper, we present a new technique that provides accurate and highly reliable solutions with significant improvements in computational time. The proposed method takes advantage of known eigensolution information and is based on perturbation method. PMID:21532698

  16. Diffraction imaging: The limits of partial coherence

    NASA Astrophysics Data System (ADS)

    Chen, Bo; Abbey, Brian; Dilanian, Ruben; Balaur, Eugeniu; van Riessen, Grant; Junker, Mark; Tran, Chanh Q.; Jones, Michael W. M.; Peele, Andrew G.; McNulty, Ian; Vine, David J.; Putkunz, Corey T.; Quiney, Harry M.; Nugent, Keith A.

    2012-12-01

    Coherent diffraction imaging (CDI) typically requires that the source should be highly coherent both laterally and longitudinally. In this paper, we demonstrate that lateral and longitudinal partial coherence can be successfully included in a CDI reconstruction algorithm simultaneously using experimental x-ray data. We study the interplay between lateral partial coherence and longitudinal partial coherence and their relative influence on CDI. We compare our results against the coherence criteria published by Spence [Spence , UltramicroscopyULTRD60304-399110.1016/j.ultramic.2004.05.005 101, 149 (2004)] and show that for iterative ab initio phase-recovery algorithms based on those typically used in CDI and in cases where the coherence properties are known, we are able to relax the minimal coherence requirements by a factor of 2 both laterally and longitudinally, potentially yielding significant reduction in exposure time.

  17. 2010 Diffraction Methods in Structural Biology

    SciTech Connect

    Dr. Ana Gonzalez Phone:650-926-8682

    2011-03-10

    Advances in basic methodologies have played a major role in the dramatic progress in macromolecular crystallography over the past decade, both in terms of overall productivity and in the increasing complexity of the systems being successfully tackled. The 2010 Gordon Research Conference on Diffraction Methods in Structural Biology will, as in the past, focus on the most recent developments in methodology, covering all aspects of the process from crystallization to model building and refinement, complemented by examples of structural highlights and complementary methods. Extensive discussion will be encouraged and it is hoped that all attendees will participate by giving oral or poster presentations, the latter using the excellent poster display area available at Bates College. The relatively small size and informal atmosphere of the meeting provides an excellent opportunity for all participants, especially younger scientists, to meet and exchange ideas with leading methods developers.

  18. Circular common-path point diffraction interferometer.

    PubMed

    Du, Yongzhao; Feng, Guoying; Li, Hongru; Vargas, J; Zhou, Shouhuan

    2012-10-01

    A simple and compact point-diffraction interferometer with circular common-path geometry configuration is developed. The interferometer is constructed by a beam-splitter, two reflection mirrors, and a telescope system composed by two lenses. The signal and reference waves travel along the same path. Furthermore, an opaque mask containing a reference pinhole and a test object holder or test window is positioned in the common focal plane of the telescope system. The object wave is divided into two beams that take opposite paths along the interferometer. The reference wave is filtered by the reference pinhole, while the signal wave is transmitted through the object holder. The reference and signal waves are combined again in the beam-splitter and their interference is imaged in the CCD. The new design is compact, vibration insensitive, and suitable for the measurement of moving objects or dynamic processes.

  19. Robust multifrequency inversion in terahertz diffraction tomography

    NASA Astrophysics Data System (ADS)

    Chen, Ke; Castañón, David A.

    2011-03-01

    Multi-frequency terahertz imaging has received much attention in recent years due to its ability to observe unique spectral characteristics of chemicals, which can be used in numerous applications such as explosives detection. Short-pulse terahertz sources can provide broadband excitation, but current approaches for image formation based on diffraction tomography construct images independently for each frequency. This results in a lack of resolution at lower frequencies, and lower signal-to-noise reconstructions. In this paper, we explore different techniques for joint image formation using multiple frequencies for enhanced detection. Among these are techniques that use prior information on spectral characteristics of materials of interest to coherently combine information from multiple frequencies, as well as robust techniques that assume incomplete or inaccurate prior knowledge of spectral signatures. We explore the relative performance of these techniques on image reconstruction and object recognition tasks using numerical simulations.

  20. Neutron diffraction studies of natural glasses

    SciTech Connect

    Wright, A.C.; Erwin Desa, J.A.; Weeks, R.A.; Sinclair, R.N.; Bailey, D.K.

    1983-08-01

    A neutron diffraction investigation has been carried out of the structures of several naturally occurring glasses, viz. Libyan Desert glass, a Fulgurite, Wabar glass, Lechatelierite from Canon Diablo, a Tektite, Obsidian (3 samples), and Macusani glass. Libyan Desert sand has also been examined, together with crystalline ..cap alpha..-quartz and ..cap alpha..-cristobalite. A comparison of data for the natural glasses and synthetic vitreous silica (Spectrosil B) in both reciprocal and real space allows a categorisation into Silicas, which closely resemble synthetic vitreous silica, and Silicates, for which the resemblance to silica is consistently less striking. The data support the view that Libyan Desert glass and sand have a common origin, while the Tektite has a structure similar to that of volcanic glasses.

  1. Large color gamut displays with diffraction gratings.

    PubMed

    Aieta, Francesco; Morovič, Peter; Morovič, Ján; Fiorentino, Marco; Santori, Charles; Fattal, David

    2016-06-01

    The ability to display a broad variety of colors has great benefits not only in the context of entertainment but also as a means to streamline design in prototyping and manufacturing processes. Displays that use RGB filters or backlights cannot span all colors that occur in nature. To improve the accuracy of color reproduction, there have been attempts to include additional color primaries in displays. Existing solutions, however, have an impact on cost, scalability, and spatial resolution and are predominantly applicable to projection systems. We propose an approach based on combining diffraction grating extractors and the HANS imaging pipeline initially developed for printing. This combination offers unprecedented potential to attain large color gamuts with the same backlights commercially used today.

  2. Applications of advanced diffractive optical elements

    NASA Technical Reports Server (NTRS)

    Welch, W. Hudson; Morris, James E.; Feldman, Michael R.

    1993-01-01

    Digital Optics Corporation is a UNC-Charlotte spin-off company, established to transfer technology developed at UNC-Charlotte for the design and manufacture Computer Generated Holograms (CGH's) and to market products based on CGH technology. DOC acquired core technologies from UNC-Charlotte including: (1) a CGH encoding process that can provide holograms with extremely high diffraction efficiency; (2) a low cost, high precision CGH manufacturing process; and (3) extensive holographic and refractive element design capabilities for design and evaluation of complex optical systems. These technologies have been used to design and/or manufacture optical components for a variety of applications including: (1) generation of Spot arrays; (2) fiber optic coupling elements; (3) optical interconnects between VLSI chips within and between multichip modules; and (4) imaging systems for head-mounted displays (HMD's).

  3. Liquids identification with x-ray diffraction

    NASA Astrophysics Data System (ADS)

    Harding, G.; Delfs, J.

    2007-09-01

    A novel identification technique suited to security screening of liquid and amorphous substances with x-ray diffraction (XRD) is presented. The starting point is to fit the high momentum region (independent atom regime) of the XRD profile with a free-atom scatter function corresponding most closely to the effective atomic number of the sample. The Percus-Yevick formulation of the molecular interference function for hard-sphere liquids then enables features to be extracted from liquid/amorphous XRD profiles. These features correspond to such molecular structure parameters as effective particle radius, packing fraction, effective atomic number, particle homogeneity and inter-particle potential. Amorphous substances may thus be classified into functional groups such as oxidisers and fuels. These considerations are illustrated with synchrotron XRD measurements of acetone and hydrogen peroxide, implicated in the London "transatlantic aircraft plot" of 2006 and representative of hazardous liquid fuel and oxidizer combinations.

  4. Nuclear dynamical diffraction using synchrotron radiation

    SciTech Connect

    Brown, D.E.

    1993-05-01

    The scattering of synchrotron radiation by nuclei is extensively explored in this thesis. From the multipole electric field expansion resulting from time-dependent nonrelativistic perturbation theory, a dynamical scattering theory is constructed. This theory is shown, in the many particle limit, to be equivalent to the semi-classical approach where a quantum mechanical scattering amplitude is used in the Maxwell inhomogeneous wave equation. The Moessbauer specimen whose low-lying energy levels were probed is a ferromagnetic lattice of {sup 57}Fe embedded in a yttrium iron garnet (YIG) crystal matrix. The hyperfine fields in YIG thin films were studied at low and room temperature using time-resolved quantum beat spectroscopy. Nuclear hyperfine structure quantum beats were measured using a fast plastic scintillator coincidence photodetector and associated electronics having a time resolution of 2.5 nsec. The variation of the quantum beat patterns near the Bragg [0 0 2] diffraction peak gave a Lamb-Moessbauer factor of 8.2{plus_minus}0.4. Exploring characteristic dynamical features in the higher order YIG [0 0 10] reflection revealed that one of the YIG crystals had bifurcated into two different layers. The dynamics of nuclear superradiance was explored. This phenomenon includes the radiative speedup exhibited by a collective state of particles, and, in striking concurrence, resonance frequency shifts. A speedup of a factor of 4 in the total decay rate and a beat frequency shift of 1{1/2} natural resonance linewidths were observed. Nuclear resonance scattering was also found to be a useful way of performing angular interferometry experiments, and it was used to observe the phase shift of a rotated quantum state. On the whole, nuclear dynamical diffraction theory has superbly explained many of the fascinating features of resonant magnetic dipole radiation scattered by a lattice of nuclei.

  5. Anomalous refraction, diffraction, and imaging in metamaterials

    NASA Astrophysics Data System (ADS)

    Paul, Thomas; Rockstuhl, Carsten; Menzel, Christoph; Lederer, Falk

    2009-03-01

    In the past several years, optical metamaterials (MMs) have attracted a considerable deal of interest because it may be anticipated that their properties can be shaped to an unprecedented extent relieving optics from some of its natural limitations. An inevitable first step toward this goal is the evaluation of the optical properties of specifically designed MMs. To date, apart from identifying chiral properties of very specific configurations, this is primarily done in retrieving an effective refractive index—mostly—only for normal incidence. On this basis suggestions for a perfect lens, exploiting this negative refractive index have been put forward by taking advantage of geometrical optics arguments. We show that this approach is pointless for realistic MMs. Instead we prove that the dispersion relation of normal modes in these MMs provides all the required information. Most of the relevant optical parameters, such as refraction and diffraction coefficients, can be derived from this relation. Imaging properties follow straightforwardly from that data. This general approach holds for any optical material, in particular, for all MMs in question. As an example, we apply it to the fishnet structure: one of the most prominent and best studied design approaches to date. We show that both refraction and diffraction properties are strongly spatially and temporally dispersive and they can even change sign. In detail, we study the effect of these peculiarities on imaging and refraction of finite beams. In particular, we discuss both the effect of the specific dispersion relation and the losses on the imaging properties. All our physical predictions are backed by rigorous numerical calculations and the agreement is almost perfect. Ultimately the main conclusion to be drawn is that a negative index of refraction is by no means a sufficient criterion to achieve negative refraction and/or perfect imaging.

  6. Dual-domain point diffraction interferometer

    DOEpatents

    Naulleau, Patrick P.; Goldberg, Kenneth Alan

    2000-01-01

    A hybrid spatial/temporal-domain point diffraction interferometer (referred to as the dual-domain PS/PDI) that is capable of suppressing the scattered-reference-light noise that hinders the conventional PS/PDI is provided. The dual-domain PS/PDI combines the separate noise-suppression capabilities of the widely-used phase-shifting and Fourier-transform fringe pattern analysis methods. The dual-domain PS/PDI relies on both a more restrictive implementation of the image plane PS/PDI mask and a new analysis method to be applied to the interferograms generated and recorded by the modified PS/PDI. The more restrictive PS/PDI mask guarantees the elimination of spatial-frequency crosstalk between the signal and the scattered-light noise arising from scattered-reference-light interfering with the test beam. The new dual-domain analysis method is then used to eliminate scattered-light noise arising from both the scattered-reference-light interfering with the test beam and the scattered-reference-light interfering with the "true" pinhole-diffracted reference light. The dual-domain analysis method has also been demonstrated to provide performance enhancement when using the non-optimized standard PS/PDI design. The dual-domain PS/PDI is essentially a three-tiered filtering system composed of lowpass spatial-filtering the test-beam electric field using the more restrictive PS/PDI mask, bandpass spatial-filtering the individual interferogram irradiance frames making up the phase-shifting series, and bandpass temporal-filtering the phase-shifting series as a whole.

  7. Common variants in the human platelet PAR4 thrombin receptor alter platelet function and differ by race.

    PubMed

    Edelstein, Leonard C; Simon, Lukas M; Lindsay, Cory R; Kong, Xianguo; Teruel-Montoya, Raúl; Tourdot, Benjamin E; Chen, Edward S; Ma, Lin; Coughlin, Shaun; Nieman, Marvin; Holinstat, Michael; Shaw, Chad A; Bray, Paul F

    2014-11-27

    Human platelets express 2 thrombin receptors: protease-activated receptor (PAR)-1 and PAR4. Recently, we reported 3.7-fold increased PAR4-mediated aggregation kinetics in platelets from black subjects compared with white subjects. We now show that platelets from blacks (n = 70) express 14% more PAR4 protein than those from whites (n = 84), but this difference is not associated with platelet PAR4 function. Quantitative trait locus analysis identified 3 common single nucleotide polymorphisms in the PAR4 gene (F2RL3) associated with PAR4-induced platelet aggregation. Among these single nucleotide polymorphisms, rs773902 determines whether residue 120 in transmembrane domain 2 is an alanine (Ala) or threonine (Thr). Compared with the Ala120 variant, Thr120 was more common in black subjects than in white subjects (63% vs 19%), was associated with higher PAR4-induced human platelet aggregation and Ca2+ flux, and generated greater inositol 1,4,5-triphosphate in transfected cells. A second, less frequent F2RL3 variant, Phe296Val, was only observed in blacks and abolished the enhanced PAR4-induced platelet aggregation and 1,4,5-triphosphate generation associated with PAR4-Thr120. PAR4 genotype did not affect vorapaxar inhibition of platelet PAR1 function, but a strong pharmacogenetic effect was observed with the PAR4-specific antagonist YD-3 [1-benzyl-3(ethoxycarbonylphenyl)-indazole]. These findings may have an important pharmacogenetic effect on the development of new PAR antagonists.

  8. Common variants in the human platelet PAR4 thrombin receptor alter platelet function and differ by race

    PubMed Central

    Edelstein, Leonard C.; Simon, Lukas M.; Lindsay, Cory R.; Kong, Xianguo; Teruel-Montoya, Raúl; Tourdot, Benjamin E.; Chen, Edward S.; Ma, Lin; Coughlin, Shaun; Nieman, Marvin; Holinstat, Michael; Shaw, Chad A.

    2014-01-01

    Human platelets express 2 thrombin receptors: protease-activated receptor (PAR)-1 and PAR4. Recently, we reported 3.7-fold increased PAR4-mediated aggregation kinetics in platelets from black subjects compared with white subjects. We now show that platelets from blacks (n = 70) express 14% more PAR4 protein than those from whites (n = 84), but this difference is not associated with platelet PAR4 function. Quantitative trait locus analysis identified 3 common single nucleotide polymorphisms in the PAR4 gene (F2RL3) associated with PAR4-induced platelet aggregation. Among these single nucleotide polymorphisms, rs773902 determines whether residue 120 in transmembrane domain 2 is an alanine (Ala) or threonine (Thr). Compared with the Ala120 variant, Thr120 was more common in black subjects than in white subjects (63% vs 19%), was associated with higher PAR4-induced human platelet aggregation and Ca2+ flux, and generated greater inositol 1,4,5-triphosphate in transfected cells. A second, less frequent F2RL3 variant, Phe296Val, was only observed in blacks and abolished the enhanced PAR4-induced platelet aggregation and 1,4,5-triphosphate generation associated with PAR4-Thr120. PAR4 genotype did not affect vorapaxar inhibition of platelet PAR1 function, but a strong pharmacogenetic effect was observed with the PAR4-specific antagonist YD-3 [1-benzyl-3(ethoxycarbonylphenyl)-indazole]. These findings may have an important pharmacogenetic effect on the development of new PAR antagonists. PMID:25293779

  9. Realizing in-plane surface diffraction by x-ray multiple-beam diffraction with large incidence angle

    SciTech Connect

    Huang, Xian-Rong Gog, Thomas; Assoufid, Lahsen; Peng, Ru-Wen; Siddons, D. P.

    2014-11-03

    Based on rigorous dynamical-theory calculations, we demonstrate the principle of an x-ray multiple-beam diffraction (MBD) scheme that overcomes the long-lasting difficulties of high-resolution in-plane diffraction from crystal surfaces. This scheme only utilizes symmetric reflection geometry with large incident angles but activates the out-of-plane and in-plane diffraction processes simultaneously and separately in the continuous MBD planes. The in-plane diffraction is realized by detoured MBD, where the intermediate diffracted waves propagate parallel to the surface, which corresponds to an absolute Bragg surface diffraction configuration that is extremely sensitive to surface structures. A series of MBD diffraction and imaging techniques may be developed from this principle to study surface/interface (misfit) strains, lateral nanostructures, and phase transitions of a wide range of (pseudo)cubic crystal structures, including ultrathin epitaxial films and multilayers, quantum dots, strain-engineered semiconductor or (multi)ferroic materials, etc.

  10. Noncanonical PAR3 activation by factor Xa identifies a novel pathway for Tie2 activation and stabilization of vascular integrity

    PubMed Central

    Stavenuiter, Fabian

    2014-01-01

    Endothelial barrier protective effects of activated protein C (APC) require the endothelial protein C receptor (EPCR), protease-activated receptor (PAR) 1, and PAR3. In contrast, PAR1 and PAR3 activation by thrombin results in barrier disruption. Noncanonical PAR1 and PAR3 activation by APC vs canonical activation by thrombin provides an explanation for the functional selectivity of these proteases. Here we found that factor Xa (FXa) activated PAR1 at canonical Arg41 similar to thrombin but cleaved PAR3 at noncanonical Arg41 similar to APC. This unique PAR1-PAR3 activation profile permitted the identification of noncanonical PAR3 activation as a novel activation pathway for barrier protective tunica intima endothelial receptor tyrosine kinase 2 (Tie2). APC, FXa, and the noncanonical PAR3 tethered-ligand peptide induced prolonged activation of Tie2, whereas thrombin and the canonical PAR3 tethered-ligand peptide did not. Tie2 activation by FXa required PAR3 and EPCR. FXa and the noncanonical PAR3 tethered-ligand peptide induced Tie2- and PAR3-dependent upregulation of tight-junction-associated protein zona occludens 1 (ZO-1), translocation of ZO-1 to cell-cell borders, and the formation of typical ZO-1 honeycomb patterns that are indicative of tight-junction stabilization. These data provide intriguing novel insights into the diversification of functional selectivity of protease signaling achievable by canonical and noncanonical PAR activation, such as the activation of vascular-protective Tie2 by noncanonical PAR3 activation. PMID:25320242

  11. The polarity protein Par6 is coupled to the microtubule network during molluscan early embryogenesis

    SciTech Connect

    Homma, Taihei; Shimizu, Miho; Kuroda, Reiko

    2011-01-07

    Research highlights: {yields} The cDNAs encoding Par6 and aPKC homologues were cloned from the snail Lymnaea stagnalis. {yields} L. stagnalis Par6 directly interacts with tubulin and microtubules and localizes to the microtubule cytoskeleton during the early embryogenesis. {yields} Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of body handedness. -- Abstract: Cell polarity, which directs the orientation of asymmetric cell division and segregation of fate determinants, is a fundamental feature of development and differentiation. Regulators of polarity have been extensively studied, and the critical importance of the Par (partitioning-defective) complex as the polarity machinery is now recognized in a wide range of eukaryotic systems. The Par polarity module is evolutionarily conserved, but its mechanism and cooperating factors vary among different systems. Here we describe the cloning and characterization of a pond snail Lymnaea stagnalis homologue of partitioning-defective 6 (Lspar6). The protein product LsPar6 shows high affinity for microtubules and localizes to the mitotic apparatus during embryonic cell division. In vitro assays revealed direct binding of LsPar6 to tubulin and microtubules, which is the first evidence of the direct interaction between the two proteins. The interaction is mediated by two distinct regions of LsPar6 both located in the N-terminal half. Atypical PKC, a functional partner of Par6, was also found to localize to the mitotic spindle. These results suggest that the L. stagnalis Par complex employs the microtubule network in cell polarity processes during the early embryogenesis. Identical sequence and localization of LsPar6 for the dextral and the sinistral snails exclude the possibility of the gene being the primary determinant of handedness.

  12. Mapping atomic arrays in crystals by interpreting electron diffraction patterns

    NASA Astrophysics Data System (ADS)

    Neal, Bryan; Lanning, Nick; Ware, William; Wigginton, Spencer; Lee, Chris; Bahrim, Cristian

    2012-03-01

    Analyzing diffraction of light and electrons allows one to map the geometric structure of nettings and crystals. There is a strong analogy between light and electron diffraction because in both cases the diffraction angles are small and the patterns may be described as images of a Fourier transform. Light diffraction patterns may be interpreted as the optical transforms of 2D-nettings and therefore are simpler to understand. The interpretation of electron diffraction patterns is more sophisticated and requires the visualization of the crystal's reciprocal lattice using vector algebra. With light we can analyze the redistribution of energy in diffraction patterns. Our studies indicate a deviation of about 1% from the exact conservation of energy when the ratio between slit width and slit separation approaches 1. Such a deviation is expected to show up in electron diffraction patterns produced by super dense materials. We focused our studies on electron diffraction by graphite for understanding the mechanism of electron transmission through Carbon atoms. From measuring diffraction patterns and applying the Heisenberg Uncertainty Principle, we are able to estimate the atomic transmission time of the projectile electron and the group velocity of the electron passing through the crystal. Finally, our analysis leads to the estimation of the C-C bond in a hexagonal closed-packed (hcp) graphite crystal and the volume of the Carbon atom which diffracts the projectile electron. Sponsored by the STAIRSTEP-NSF-DUE grant# 0757057.

  13. Chromatic confocal microscope using hybrid aspheric diffractive lenses

    NASA Astrophysics Data System (ADS)

    Rayer, Mathieu; Mansfield, Daniel

    2014-05-01

    A chromatic confocal microscope is a single point non-contact distance measurement sensor. For three decades the vast majority of the chromatic confocal microscope use refractive-based lenses to code the measurement axis chromatically. However, such an approach is limiting the range of applications. In this paper the performance of refractive, diffractive and Hybrid aspheric diffractive are compared. Hybrid aspheric diffractive lenses combine the low geometric aberration of a diffractive lens with the high optical power of an aspheric lens. Hybrid aspheric diffractive lenses can reduce the number of elements in an imaging system significantly or create large hyper- chromatic lenses for sensing applications. In addition, diffractive lenses can improve the resolution and the dynamic range of a chromatic confocal microscope. However, to be suitable for commercial applications, the diffractive optical power must be significant. Therefore, manufacturing such lenses is a challenge. We show in this paper how a theoretical manufacturing model can demonstrate that the hybrid aspheric diffractive configuration with the best performances is achieved by step diffractive surface. The high optical quality of step diffractive surface is then demonstrated experimentally. Publisher's Note: This paper, originally published on 5/10/14, was replaced with a corrected/revised version on 5/19/14. If you downloaded the original PDF but are unable to access the revision, please contact SPIE Digital Library Customer Service for assistance.

  14. Pars plana vitrectomy through the Boston Keratoprosthesis type 1

    PubMed Central

    Harissi-Dagher, M; Durr, G M; Biernacki, K; Sebag, M; Rhéaume, M-A

    2013-01-01

    Purpose To ascertain the feasibility of pars plana vitrectomy (PPV) through a permanent Boston Keratoprosthesis type 1 (KPro) without the use of a temporary KPro. Methods A retrospective interventional case series. Eyes implanted with Boston KPro type 1 between 2008 and 2011 requiring PPV for vitreoretinal complications were included. Feasibility of PPV through the KPro, its anatomical and functional success were studied. Results Five out of 70 patients required PPV for vitreoretinal complications post-KPro surgery resulting in an incidence of 7%. PPV was feasible through the Boston KPro with no deleterious effects on the corneal carrier or the KPro itself. Repeat PPV was necessary in some cases. Although anatomical repair of the vitreoretinal complications was achieved in most cases, post PPV visual acuity remained poor in the majority. Conclusion Our study suggests that although PPV through the Boston KPro is a viable approach for vitreoretinal disease repair, visual rehabilitation remains poor. PMID:23579405

  15. Activation of protease-activated receptors (PARs)-1 and -2 promotes alpha-smooth muscle actin expression and release of cytokines from human lung fibroblasts

    PubMed Central

    Asokananthan, Nithiananthan; Lan, Rommel S; Graham, Peter T; Bakker, Anthony J; Tokanović, Ana; Stewart, Geoffrey A

    2015-01-01

    Previous studies have shown that protease-activated receptors (PARs) play an important role in various physiological processes. In the present investigation, we determined the expression of PARs on human lung fibroblasts (HLF-1) and whether they were involved in cellular differentiation and pro-inflammatory cytokine and prostaglandin (PGE2) secretion. PAR-1, PAR-2, PAR-3, and PAR-4 were detected in fibroblasts using RT-PCR, immunocytochemistry, and flow cytometry. Increased expression of PAR-4, but not other PARs, was observed in fibroblasts stimulated with phorbol myristate acetate. The archetypical activators of PARs, namely, thrombin and trypsin, as well as PAR-1 and PAR-2 agonist peptides, stimulated transient increases in intracellular Ca2+, and promoted increased α-smooth muscle actin expression. The proteolytic and peptidic PAR activators also stimulated the release of IL-6 and IL-8, as well as PGE2, with a rank order of potency of PAR-1 > PAR-2. The combined stimulation of PAR-1 and PAR-2 resulted in an additive release of both IL-6 and IL-8. In contrast, PAR-3 and PAR-4 agonist peptides, as well as all the PAR control peptides examined, were inactive. These results suggest an important role for PARs associated with fibroblasts in the modulation of inflammation and remodeling in the airway. PMID:25663523

  16. Activation of protease-activated receptors (PARs)-1 and -2 promotes alpha-smooth muscle actin expression and release of cytokines from human lung fibroblasts.

    PubMed

    Asokananthan, Nithiananthan; Lan, Rommel S; Graham, Peter T; Bakker, Anthony J; Tokanović, Ana; Stewart, Geoffrey A

    2015-02-01

    Previous studies have shown that protease-activated receptors (PARs) play an important role in various physiological processes. In the present investigation, we determined the expression of PARs on human lung fibroblasts (HLF-1) and whether they were involved in cellular differentiation and pro-inflammatory cytokine and prostaglandin (PGE2) secretion. PAR-1, PAR-2, PAR-3, and PAR-4 were detected in fibroblasts using RT-PCR, immunocytochemistry, and flow cytometry. Increased expression of PAR-4, but not other PARs, was observed in fibroblasts stimulated with phorbol myristate acetate. The archetypical activators of PARs, namely, thrombin and trypsin, as well as PAR-1 and PAR-2 agonist peptides, stimulated transient increases in intracellular Ca(2+), and promoted increased α-smooth muscle actin expression. The proteolytic and peptidic PAR activators also stimulated the release of IL-6 and IL-8, as well as PGE2, with a rank order of potency of PAR-1 > PAR-2. The combined stimulation of PAR-1 and PAR-2 resulted in an additive release of both IL-6 and IL-8. In contrast, PAR-3 and PAR-4 agonist peptides, as well as all the PAR control peptides examined, were inactive. These results suggest an important role for PARs associated with fibroblasts in the modulation of inflammation and remodeling in the airway.

  17. Clinical outcomes of pars plicata anterior vitrectomy: 2-year results

    PubMed Central

    Narang, Priya; Agarwal, Amar

    2015-01-01

    Purpose: To demonstrate the safety and outcome of a surgical approach that uses pars plicata site for anterior vitrectomy during phacoemulsification procedure complicated by posterior capsule rupture and residual cortical matter. Design: Single center, retrospective, interventional, noncomparative study. Materials and Methods: Medical records of a consecutive series of 35 eyes of 35 patients who underwent pars plicata anterior vitrectomy (PPAV) were reviewed. The main outcome measures were corrected and uncorrected distance visual acuity (CDVA, UDVA), early and late postoperative complications and intraocular pressure (IOP). Ultrasound biomicroscopic (UBM) evaluation of sclerotomy site and spectral domain optical coherence tomography analysis for central macular thickness (CMT) was performed. The final visual outcome at 2 years was evaluated. Results: At 2 years follow-up, the mean postoperative UDVA (logarithm of the minimum angle of resolution [logMAR]) and CDVA (logMAR) was 0.49 ± 0.26 and 0.19 ± 0.14, respectively. There was no significant change in the IOP (P = 0.061) and the mean CMT at 2 years was 192.5 ± 5.54 μm. The postoperative UBM image of the sclerotomy site at 8 weeks demonstrated a clear wound without any vitreous adhesion or incarceration. Intraoperative hyphema was seen in 1 (2.8%) case and postoperative uveitis was seen in 2 (5.7%) cases, which resolved with medications. No case of an iatrogenic retinal break or retinal detachment was reported. Conclusions: PPAV enables a closed chamber approach, allows thorough cleanup of vitreous in the pupillary plane and anterior chamber and affords better access to the subincisional and retropupillary cortical remnant with a significant visual outcome and an acceptable complication rate. PMID:26632124

  18. The influence of diffraction gratings relief noise on the intensity distribution in diffraction orders

    NASA Astrophysics Data System (ADS)

    Kolyuchkin, V. V.; Odinokov, S. B.

    2016-08-01

    The method of security hologram quality inspection, in which the relief phase parameters are determined by registering results of the intensity distribution in diffraction orders, is known. The profile of relief as a harmonious distribution is represented. Deviation of the real relief profile from the ideal profile, another words phase relief noise, influence on the accuracy of this method. In the paper, on the assumption of homogeneity of the phase relief noise, the mathematical expressions for evaluating the influence of the phase relief noise on the intensity distribution in the diffraction orders are represented. Parameters of the correlation functions approximation describing the phase relief noise are determined. The dependence of the intensity values from the standard deviation of the phase relief noise is represented.

  19. Structure refinement using precession electron diffraction tomography and dynamical diffraction: tests on experimental data.

    PubMed

    Palatinus, Lukáš; Corrêa, Cinthia Antunes; Steciuk, Gwladys; Jacob, Damien; Roussel, Pascal; Boullay, Philippe; Klementová, Mariana; Gemmi, Mauro; Kopeček, Jaromír; Domeneghetti, M Chiara; Cámara, Fernando; Petříček, Václav

    2015-12-01

    The recently published method for the structure refinement from three-dimensional precession electron diffraction data using dynamical diffraction theory [Palatinus et al. (2015). Acta Cryst. A71, 235-244] has been applied to a set of experimental data sets from five different samples - Ni2Si, PrVO3, kaolinite, orthopyroxene and mayenite. The data were measured on different instruments and with variable precession angles. For each sample a reliable reference structure was available. A large series of tests revealed that the method provides structure models with an average error in atomic positions typically between 0.01 and 0.02 Å. The obtained structure models are significantly more accurate than models obtained by refinement using kinematical approximation for the calculation of model intensities. The method also allows a reliable determination of site occupancies and determination of absolute structure. Based on the extensive tests, an optimal set of the parameters for the method is proposed.

  20. An accurate dynamical electron diffraction algorithm for reflection high-energy electron diffraction

    NASA Astrophysics Data System (ADS)

    Huang, J.; Cai, C. Y.; Lv, C. L.; Zhou, G. W.; Wang, Y. G.

    2015-12-01

    The conventional multislice method (CMS) method, one of the most popular dynamical electron diffraction calculation procedures in transmission electron microscopy, was introduced to calculate reflection high-energy electron diffraction (RHEED) as it is well adapted to deal with the deviations from the periodicity in the direction parallel to the surface. However, in the present work, we show that the CMS method is no longer sufficiently accurate for simulating RHEED with the accelerating voltage 3-100 kV because of the high-energy approximation. An accurate multislice (AMS) method can be an alternative for more accurate RHEED calculations with reasonable computing time. A detailed comparison of the numerical calculation of the AMS method and the CMS method is carried out with respect to different accelerating voltages, surface structure models, Debye-Waller factors and glancing angles.

  1. Actin polymerisation regulates thrombin-evoked Ca(2+) signalling after activation of PAR-4 but not PAR-1 in human platelets.

    PubMed

    Harper, Matthew T; Sage, Stewart O

    2006-05-01

    The role of actin polymerisation in regulating thrombin-evoked Ca(2+) signalling was investigated in human platelets. We have previously reported that cytochalasin D (Cyt D) inhibits thapsigargin-evoked store-operated Ca(2+) entry (SOCE), which is believed to contribute a major component of thrombin-evoked Ca(2+) entry in platelets. In contrast, Cyt D increased thrombin-evoked Ca(2+) entry to 147.5 +/- 9.2% and Sr(2+) entry to 134.2 +/- 6.4% of control. Similar results were obtained with latrunculin A. This potentiation was not affected if protein kinase C was inhibited using Ro-31-8220, suggesting that it did not involve PKC-dependent non-capacitative Ca(2+) entry. Ca(2+) entry evoked by the PAR-4 agonist, AYPGKF, was increased to 133.7 +/- 12.8% of control by Cyt D, whereas Ca(2+) signalling evoked by the PAR-1 agonist, SFLLRN, was unaffected. The PAR-4 antagonist, tcY-NH(2), abolished the effect of Cyt D on thrombin-evoked Ca(2+) entry. Biotinylation of cell-surface proteins showed that PAR-4 was internalised after stimulation by thrombin. Cyt D reduced this internalisation. These data suggest that Cyt D prevents the internalisation of PAR-4, which may lead to prolonged signalling from this receptor. This may mask a direct effect of Cyt D on the activation of SOCE after the activation of PAR-4. PMID:16702038

  2. Diffraction Ellipsometry Studies on Insect Flight Muscle

    NASA Astrophysics Data System (ADS)

    Shen, Sui

    Characterization of the orientation and distribution of myosin cross-bridge at rigor, relax, low ionic strength (36 mM) and activation (pCa 4.3) conditions are of great interest since these states have been proposed to be transient steps in the cyclical interaction of myosin heads with actin during contraction. Measurements sensitive to the cross-bridge orientation in chemically skinned single muscle fibers of the insect, Lethocerus collossicus have been performed under various physiological conditions using laser diffraction ellipsometry. Determination of both the total birefringence, Deltan, and the differential field ratio, rm DFR (defined as {E_parallel -E_|over E_parallel-E _|}),is necessary for complete characterization of the optical polarization state. For rigor insect fiber, the birefringence value was close to the value we obtained from chemically skinned frog muscle fibers. However, the differential field ratio, DFR, was a negative value for insect fiber, while we always measured a positive value from frog muscle fibers. Polarization states of light diffracted from fibers exhibited a dependence on configurations of structural proteins at different conditions: fluid index matching using o-toluidine, alpha -chymotrypsin cleavage, KCl myosin extraction, rigor state, relaxed state, exogenous S-1 binding on rigor fiber, low ionic strength state, activation state at resting or stretched length. Results of our data analysis suggested that: (1) the negative DFR value of the insect flight muscle was contributed by alpha-actinin arranged perpendicular to the fiber axis in the Z-line, (2) in rigor fiber, 70% of myosin heads are doubly bound (45^circ and 90^ circ) while the rest of 30% are in single head binding configuration (90^circ), (3) myosin heads are randomly oriented in relaxed fiber, (4) mean axial angle is about 62^ circ for exogenous myosin heads binding on rigor fiber, (5) at low ionic strength, 25% of the total myosin heads are weakly attached to actin

  3. Par3 controls neural crest migration by promoting microtubule catastrophe during contact inhibition of locomotion.

    PubMed

    Moore, Rachel; Theveneau, Eric; Pozzi, Sara; Alexandre, Paula; Richardson, Joanna; Merks, Anne; Parsons, Maddy; Kashef, Jubin; Linker, Claudia; Mayor, Roberto

    2013-12-01

    There is growing evidence that contact inhibition of locomotion (CIL) is essential for morphogenesis and its failure is thought to be responsible for cancer invasion; however, the molecular bases of this phenomenon are poorly understood. Here we investigate the role of the polarity protein Par3 in CIL during migration of the neural crest, a highly migratory mesenchymal cell type. In epithelial cells, Par3 is localised to the cell-cell adhesion complex and is important in the definition of apicobasal polarity, but the localisation and function of Par3 in mesenchymal cells are not well characterised. We show in Xenopus and zebrafish that Par3 is localised to the cell-cell contact in neural crest cells and is essential for CIL. We demonstrate that the dynamics of microtubules are different in different parts of the cell, with an increase in microtubule catastrophe at the collision site during CIL. Par3 loss-of-function affects neural crest migration by reducing microtubule catastrophe at the site of cell-cell contact and abrogating CIL. Furthermore, Par3 promotes microtubule catastrophe by inhibiting the Rac-GEF Trio, as double inhibition of Par3 and Trio restores microtubule catastrophe at the cell contact and rescues CIL and neural crest migration. Our results demonstrate a novel role of Par3 during neural crest migration, which is likely to be conserved in other processes that involve CIL such as cancer invasion or cell dispersion.

  4. Questioning Our Questions: Assessing Question Asking Practices to Evaluate a yPAR Program

    ERIC Educational Resources Information Center

    Grace, Sarah; Langhout, Regina Day

    2014-01-01

    The purpose of this research was to examine question asking practices in a youth participatory action research (yPAR) after school program housed at an elementary school. The research question was: In which ways did the adult question asking practices in a yPAR setting challenge and/or reproduce conventional models of power in educational…

  5. Solar PAR and UVR modify the community composition and photosynthetic activity of sea ice algae.

    PubMed

    Enberg, Sara; Piiparinen, Jonna; Majaneva, Markus; Vähätalo, Anssi V; Autio, Riitta; Rintala, Janne-Markus

    2015-10-01

    The effects of increased photosynthetically active radiation (PAR) and ultraviolet radiation (UVR) on species diversity, biomass and photosynthetic activity were studied in fast ice algal communities. The experimental set-up consisted of nine 1.44 m(2) squares with three treatments: untreated with natural snow cover (UNT), snow-free (PAR + UVR) and snow-free ice covered with a UV screen (PAR). The total algal biomass, dominated by diatoms and dinoflagellates, increased in all treatments during the experiment. However, the smaller biomass growth in the top 10-cm layer of the PAR + UVR treatment compared with the PAR treatment indicated the negative effect of UVR. Scrippsiella complex (mainly Scrippsiella hangoei, Biecheleria baltica and Gymnodinium corollarium) showed UV sensitivity in the top 5-cm layer, whereas Heterocapsa arctica ssp. frigida and green algae showed sensitivity to both PAR and UVR. The photosynthetic activity was highest in the top 5-cm layer of the PAR treatment, where the biomass of the pennate diatom Nitzschia frigida increased, indicating the UV sensitivity of this species. This study shows that UVR is one of the controlling factors of algal communities in Baltic Sea ice, and that increased availability of PAR together with UVR exclusion can cause changes in algal biomass, photosynthetic activity and community composition.

  6. 12 CFR 925.19 - Par value and price of stock.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 12 Banks and Banking 7 2010-01-01 2010-01-01 false Par value and price of stock. 925.19 Section 925.19 Banks and Banking FEDERAL HOUSING FINANCE BOARD FEDERAL HOME LOAN BANK MEMBERS AND HOUSING ASSOCIATES MEMBERS OF THE BANKS Stock Requirements § 925.19 Par value and price of stock. The capital...

  7. Participatory Action Research (PAR) cum Action Research (AR) in Teacher Professional Development: A Literature Review

    ERIC Educational Resources Information Center

    Morales, Marie Paz E.

    2016-01-01

    This paper reviews Participatory Action Research as an approach to teacher professional development. It maps the origins of Participatory Action Research (PAR) and discusses the benefits and challenges that have been identified by other researchers in utilizing PAR approaches in conducting research. It draws ideas of combining the features of…

  8. Solar PAR and UVR modify the community composition and photosynthetic activity of sea ice algae.

    PubMed

    Enberg, Sara; Piiparinen, Jonna; Majaneva, Markus; Vähätalo, Anssi V; Autio, Riitta; Rintala, Janne-Markus

    2015-10-01

    The effects of increased photosynthetically active radiation (PAR) and ultraviolet radiation (UVR) on species diversity, biomass and photosynthetic activity were studied in fast ice algal communities. The experimental set-up consisted of nine 1.44 m(2) squares with three treatments: untreated with natural snow cover (UNT), snow-free (PAR + UVR) and snow-free ice covered with a UV screen (PAR). The total algal biomass, dominated by diatoms and dinoflagellates, increased in all treatments during the experiment. However, the smaller biomass growth in the top 10-cm layer of the PAR + UVR treatment compared with the PAR treatment indicated the negative effect of UVR. Scrippsiella complex (mainly Scrippsiella hangoei, Biecheleria baltica and Gymnodinium corollarium) showed UV sensitivity in the top 5-cm layer, whereas Heterocapsa arctica ssp. frigida and green algae showed sensitivity to both PAR and UVR. The photosynthetic activity was highest in the top 5-cm layer of the PAR treatment, where the biomass of the pennate diatom Nitzschia frigida increased, indicating the UV sensitivity of this species. This study shows that UVR is one of the controlling factors of algal communities in Baltic Sea ice, and that increased availability of PAR together with UVR exclusion can cause changes in algal biomass, photosynthetic activity and community composition. PMID:26310455

  9. Resonant diffraction gratings for spatial differentiation of optical beams

    SciTech Connect

    Golovastikov, N V; Bykov, D A; Doskolovich, L L

    2014-10-31

    Diffraction of a two-dimensional optical beam from a resonant diffraction grating is considered. It is shown that at certain resonance parameters the diffraction grating allows for spatial differentiation and integration of the incident beam. The parameters of the diffraction grating for spatial differentiation of optical beams in the transmission geometry are calculated. It is shown that the differentiating diffraction grating allows the conversion of the two-dimensional beam into the two-dimensional Hermite – Gaussian mode. The presented results of numerical modelling are in good agreement with the proposed theoretical description. The use of the considered resonant diffraction gratings is promising for solving the problems of all-optical data processing. (laser applications and other topics in quantum electronics)

  10. Single-pulse x-ray diffraction using polycapillary optics for in situ dynamic diffraction.

    PubMed

    Maddox, B R; Akin, M C; Teruya, A; Hunt, D; Hahn, D; Cradick, J; Morgan, D V

    2016-08-01

    Diagnostic use of single-pulse x-ray diffraction (XRD) at pulsed power facilities can be challenging due to factors such as the high flux and brightness requirements for diffraction and the geometric constraints of experimental platforms. By necessity, the x-ray source is usually positioned very close, within a few inches of the sample. On dynamic compression platforms, this puts the x-ray source in the debris field. We coupled x-ray polycapillary optics to a single-shot needle-and-washer x-ray diode source using a laser-based alignment scheme to obtain high-quality x-ray diffraction using a single 16 ns x-ray pulse with the source >1 m from the sample. The system was tested on a Mo sample in reflection geometry using 17 keV x-rays from a Mo anode. We also identified an anode conditioning effect that increased the x-ray intensity by 180%. Quantitative measurements of the x-ray focal spot produced by the polycapillary yielded a total x-ray flux on the sample of 3.3 ± 0.5 × 10(7) molybdenum Kα photons.

  11. Single-pulse x-ray diffraction using polycapillary optics for in situ dynamic diffraction.

    PubMed

    Maddox, B R; Akin, M C; Teruya, A; Hunt, D; Hahn, D; Cradick, J; Morgan, D V

    2016-08-01

    Diagnostic use of single-pulse x-ray diffraction (XRD) at pulsed power facilities can be challenging due to factors such as the high flux and brightness requirements for diffraction and the geometric constraints of experimental platforms. By necessity, the x-ray source is usually positioned very close, within a few inches of the sample. On dynamic compression platforms, this puts the x-ray source in the debris field. We coupled x-ray polycapillary optics to a single-shot needle-and-washer x-ray diode source using a laser-based alignment scheme to obtain high-quality x-ray diffraction using a single 16 ns x-ray pulse with the source >1 m from the sample. The system was tested on a Mo sample in reflection geometry using 17 keV x-rays from a Mo anode. We also identified an anode conditioning effect that increased the x-ray intensity by 180%. Quantitative measurements of the x-ray focal spot produced by the polycapillary yielded a total x-ray flux on the sample of 3.3 ± 0.5 × 10(7) molybdenum Kα photons. PMID:27587130

  12. Single-pulse x-ray diffraction using polycapillary optics for in situ dynamic diffraction

    NASA Astrophysics Data System (ADS)

    Maddox, B. R.; Akin, M. C.; Teruya, A.; Hunt, D.; Hahn, D.; Cradick, J.; Morgan, D. V.

    2016-08-01

    Diagnostic use of single-pulse x-ray diffraction (XRD) at pulsed power facilities can be challenging due to factors such as the high flux and brightness requirements for diffraction and the geometric constraints of experimental platforms. By necessity, the x-ray source is usually positioned very close, within a few inches of the sample. On dynamic compression platforms, this puts the x-ray source in the debris field. We coupled x-ray polycapillary optics to a single-shot needle-and-washer x-ray diode source using a laser-based alignment scheme to obtain high-quality x-ray diffraction using a single 16 ns x-ray pulse with the source >1 m from the sample. The system was tested on a Mo sample in reflection geometry using 17 keV x-rays from a Mo anode. We also identified an anode conditioning effect that increased the x-ray intensity by 180%. Quantitative measurements of the x-ray focal spot produced by the polycapillary yielded a total x-ray flux on the sample of 3.3 ± 0.5 × 107 molybdenum Kα photons.

  13. Factorization and non-factorization in diffractive hard scattering

    SciTech Connect

    Berera, Arjun

    1997-04-20

    Factorization, in the sense defined for inclusive hard scattering, is discussed for diffractive hard scattering. A factorization theorem similar to its inclusive counterpart is presented for diffractive DIS. For hadron-hadron diffractive hard scattering, in contrast to its inclusive counterpart, the expected breakdown of factorization is discussed. Cross section estimates are given from a simple field theory model for non-factorizing double-pomeron-exchange (DPE) dijet production with and without account for Sudakov suppression.

  14. Ultrafast Time-Resolved Electron Diffraction with Megavolt Electron Beams

    SciTech Connect

    Hastings, J.B.; Rudakov, F.M.; Dowell, D.H.; Schmerge, J.F.; Cardoza, J.D.; Castro, J.M.; Gierman, S.M.; Loos, H.; Weber, P.M.; /Brown U.

    2006-10-24

    An rf photocathode electron gun is used as an electron source for ultrafast time-resolved pump-probe electron diffraction. We observed single-shot diffraction patterns from a 160 nm Al foil using the 5.4 MeV electron beam from the Gun Test Facility at the Stanford Linear Accelerator. Excellent agreement with simulations suggests that single-shot diffraction experiments with a time resolution approaching 100 fs are possible.

  15. Design and fabrication of advanced EUV diffractive elements

    SciTech Connect

    Naulleau, Patrick P.; Liddle, J. Alexander; Salmassi, Farhad; Anderson, Erik H.; Gullikson, Eric M.

    2003-11-16

    As extreme ultraviolet (EUV) lithography approaches commercial reality, the development of EUV-compatible diffractive structures becomes increasingly important. Such devices are relevant to many aspects of EUV technology including interferometry, illumination, and spectral filtering. Moreover, the current scarcity of high power EUV sources makes the optical efficiency of these diffractive structures a paramount concern. This fact has led to a strong interest in phase-enhanced diffractive structures. Here we describe recent advancements made in the fabrication of such devices.

  16. [The coding correction of slit diffraction in Hadamard transform spectrometer].

    PubMed

    Li, Bo; Wang, Shu-Rong; Huang, Yu; Wang, Jun-Bo

    2013-08-01

    According to the principles of Hadamard transform spectrometer and the slit diffraction characteristics, the influence of spectrometer entrance slit diffraction of Hadamard transform spectrometer on the measurement result was analyzed, for the diffraction case, the Hadamard transform spectrometer instrument structure matrix was studied, and the Hadamard transform spectrometer encoding/decoding method was established. The analysis of incident spectral verified the correctness of the coding/ decoding. This method is very important for the high precision measurement of Hadamard transform spectrometer.

  17. Modern X-ray Diffraction Methods in Mineralogy and Geosciences

    SciTech Connect

    Lavina, Barbara; Dera, Przemyslaw; Downs, Robert T.

    2014-01-01

    This section is not intended to be comprehensive or detailed, because diffraction is such a vast subject. The principles of diffraction theory, however, are summarized under the assumption that the reader is familiar with basic concepts of the crystalline state. We will briefly review the basics of diffraction techniques, using laboratory and synchrotron X-ray sources and highlight some of their applications in geoscience.

  18. Evolution of diffraction efficiency from holograms with monosaccharides

    NASA Astrophysics Data System (ADS)

    Mejias-Brizuela, N. Y.; Olivares Pérez, A.; Grande Grande, A.

    2010-02-01

    We present the behaviors in the time of the diffraction efficiency of holographic gratings, there were recorded in two monosaccharides, glucose and fructose, and both were sensitized with potassium dichromate and blue dye. There monosaccharides present diffraction efficiency with a maximum of 7% approximately, without protection, the sample exposure at environmental conditions, after 48 hours the parameter of diffraction efficiency decays. By this reason is necessary to protect after of the stabilized emulsion the hologram.

  19. Diffractive wave transmission in dispersive media

    NASA Astrophysics Data System (ADS)

    Lescarret, Vincent

    The aim of this paper is to study the reflection-transmission of diffractive geometrical optic rays described by semi-linear symmetric hyperbolic systems such as the Maxwell-Lorentz equations with the anharmonic model of polarization. The framework is that of P. Donnat's thesis [P. Donnat, Quelques contributions mathématiques en optique non linéaire, chapters 1 and 2, thèse, 1996] and V. Lescarret [V. Lescarret, Wave transmission in dispersive media, M3AS 17 (4) (2007) 485-535]: we consider an infinite WKB expansion of the wave over long times/distances O(1/ɛ) and because of the boundary, we decompose each profile into a hyperbolic (purely oscillating) part and elliptic (evanescent) part as in M. William [M. William, Boundary layers and glancing blow-up in nonlinear geometric optics, Ann. Sci. École Norm. Sup. 33 (2000) 132-209]. Then to get the usual sublinear growth on the hyperbolic part of the profiles, for every corrector, we consider E, the space of bounded functions decomposing into a sum of pure transports and a "quasi compactly" supported part. We make a detailed analysis on the nonlinear interactions on E which leads us to make a restriction on the set of resonant phases. We finally give a convergence result which justifies the use of "quasi compactly" supported profiles.

  20. Future of Electron Scattering and Diffraction

    SciTech Connect

    Hall, Ernest; Stemmer, Susanne; Zheng, Haimei; Zhu, Yimei; Maracas, George

    2014-02-25

    The ability to correlate the atomic- and nanoscale-structure of condensed matter with physical properties (e.g., mechanical, electrical, catalytic, and optical) and functionality forms the core of many disciplines. Directing and controlling materials at the quantum-, atomic-, and molecular-levels creates enormous challenges and opportunities across a wide spectrum of critical technologies, including those involving the generation and use of energy. The workshop identified next generation electron scattering and diffraction instruments that are uniquely positioned to address these grand challenges. The workshop participants identified four key areas where the next generation of such instrumentation would have major impact: A – Multidimensional Visualization of Real Materials B – Atomic-scale Molecular Processes C – Photonic Control of Emergence in Quantum Materials D – Evolving Interfaces, Nucleation, and Mass Transport Real materials are comprised of complex three-dimensional arrangements of atoms and defects that directly determine their potential for energy applications. Understanding real materials requires new capabilities for three-dimensional atomic scale tomography and spectroscopy of atomic and electronic structures with unprecedented sensitivity, and with simultaneous spatial and energy resolution. Many molecules are able to selectively and efficiently convert sunlight into other forms of energy, like heat and electric current, or store it in altered chemical bonds. Understanding and controlling such process at the atomic scale require unprecedented time resolution. One of the grand challenges in condensed matter physics is to understand, and ultimately control, emergent phenomena in novel quantum materials that necessitate developing a new generation of instruments that probe the interplay among spin, charge, orbital, and lattice degrees of freedom with intrinsic time- and length-scale resolutions. Molecules and soft matter require imaging and

  1. Photoelectrochemical fabrication of spectroscopic diffraction gratings

    NASA Technical Reports Server (NTRS)

    Rauh, R. David; Carrabba, Michael M.; Nguyen, Nguyet M.

    1986-01-01

    Photoelectrochemical etching was demonstrated as a means of fabricating a variety of periodic structures in semiconductors. The semiconductor is used as an electrode in an electrochemical cell, and is in contact with a liquid electrolyte. When the crystal is held at a positive voltage and illuminated, etching occurs in only the illuminated regions to a depth proportional to the illumination intensity and exposure time. In Phase 1, it was determined that diffraction gratings could be produced in gallium arsenide crystals by this method, using either a scanned focused laser beam or by uniform illumination of a ruling mask defined in metal or photoresist on the crystal surface. The latter approach was determined to produce V-grooves if the mask is oriented along certain crystallographic directions. These V-grooves were produced with an exceedingly smooth crystal morphology due to the highly controllable nature of the process and the mild electrolytes involved. The results form the basis for photoelectrochemical fabrication of deep, low pitch Eschelle gratings for use in high orders in NASA spectrographic instrumentation such as the Space Telescope Imaging Spectrograph.

  2. Holographic generation of non-diffractive beams

    NASA Astrophysics Data System (ADS)

    Lee, Byoungho; Choi, Dawoon; Hong, Keehoon; Lee, Kyookeun; Kim, Kyoung-Youm

    2014-11-01

    An Airy beam is a non-diffractive wave which propagates along a ballistic trajectory without any external force. Although it is impossible to implement ideal Airy beams because they carry infinite power, so-called finite Airy beams can be achieved by tailoring infinite side lobes with an aperture function and they have similar propagating characteristics with those of ideal Airy beams. The finite Airy beam can be optically generated by several ways: the optical Fourier transform system with imposing cubic phase to a broad Gaussian beam, nonlinear generation of Airy beams, curved plasma channel generation, and electron beam generation. In this presentation, a holographic generation of the finite Airy beams will be discussed. The finite Airy beams can be generated in virtue of holographic technique by `reading' a hologram which is recorded by the interference between a finite Airy beam generated by the optical Fourier transform and a reference plane wave. Moreover, this method can exploit the unique features of holography itself such as successful reconstruction with the imperfect incidence of reference beam, reconstruction of phase-conjugated signal beam, and multiplexing, which can shed more light on the characteristics of finite Airy beams. This method has an advantage in that once holograms are recorded in the photopolymer, a bulky optics such as the SLM and lenses are not necessary to generate Airy beams. In addition, multiple Airy beams can be stored and reconstructed simultaneously or individually.

  3. Platelet activation via PAR4 is involved in the initiation of thrombin generation and in clot elasticity development.

    PubMed

    Vretenbrant, Karin; Ramström, Sofia; Bjerke, Maria; Lindahl, Tomas L

    2007-03-01

    Thrombin is a pivotal enzyme formed in the coagulation cascade and an important and potent platelet activator. The two protease-activated thrombin receptors on human platelets are denoted PAR1 and PAR4. The physiological relevance of PAR4 is still unclear, as both aggregation and secretion can be accomplished by PAR1 activation alone. In the present study we have investigated the role of PARs in platelet activation, blood coagulation, clot elasticity and fibrinolysis. Flow cytometry, free oscillation rheometry and thrombin generation measurements were used to analyze blood or platelet-rich plasma from healthy individuals. Maximum PAR1 activation with the peptide SFLLRN gave fewer fibrinogen-binding platelets with lower mean fluorescent intensity than maximum PAR4 activation with AYPGKF. Inhibition of any of the receptors prolonged clotting times. However, PAR1 is more important for fibrinolysis; inhibition of this receptor prolonged all the steps in the fibrinolytic process. Clot elasticity decreased significantly when the PAR4 receptor was inhibited. In the thrombin generation measurements, PAR4 inhibition delayed the thrombin generation start and peak, but did not affect the total amount of thrombin generated. PAR1 inhibition had no significant impact on thrombin generation. We found that PAR4 is most likely activated by low concentrations of thrombin during the initial phase of thrombin generation and is of importance to the clotting time. Furthermore, we suggest that the PAR4 receptor may have a physiological role in the stabilisation of the coagulum. PMID:17334509

  4. Compression Myelopathy due to Proliferative Changes around C2 Pars Defects without Instability.

    PubMed

    Kimura, Tetsuya; Sakai, Toshinori; Tezuka, Fumitake; Abe, Mitsunobu; Yamashita, Kazuta; Takata, Yoichiro; Higashino, Kosaku; Sairyo, Koichi

    2016-06-01

    We report a case with compression myelopathy due to proliferative changes around the C2 pars defects without instability. A 69-year-old man presented with progressive clumsy hands and spastic gait. Plain radiographs showed bilateral spondylolysis (pars defects) at C2 and fusion between C2 and C3 spinous processes. Dynamic views revealed mobility through the pars defects, but there was no apparent instability. Computed tomography showed proliferative changes at the pars defects, which protruded into spinal canal. On magnetic resonance imaging, the spinal cord was compressed and intramedullary high signal change was found. A diagnosis of compression myelopathy due to proliferative changes around the C2 pars defects was made. We performed posterior decompression. Postoperatively, symptoms have been alleviated and images revealed sufficient decompression and no apparent instability. In patients with the cervical spondylolysis, myelopathy caused by instability or slippage have been periodically reported. The present case involving C2 spondylolysis is extremely rare. PMID:27340539

  5. Compression Myelopathy due to Proliferative Changes around C2 Pars Defects without Instability

    PubMed Central

    Kimura, Tetsuya; Tezuka, Fumitake; Abe, Mitsunobu; Yamashita, Kazuta; Takata, Yoichiro; Higashino, Kosaku; Sairyo, Koichi

    2016-01-01

    We report a case with compression myelopathy due to proliferative changes around the C2 pars defects without instability. A 69-year-old man presented with progressive clumsy hands and spastic gait. Plain radiographs showed bilateral spondylolysis (pars defects) at C2 and fusion between C2 and C3 spinous processes. Dynamic views revealed mobility through the pars defects, but there was no apparent instability. Computed tomography showed proliferative changes at the pars defects, which protruded into spinal canal. On magnetic resonance imaging, the spinal cord was compressed and intramedullary high signal change was found. A diagnosis of compression myelopathy due to proliferative changes around the C2 pars defects was made. We performed posterior decompression. Postoperatively, symptoms have been alleviated and images revealed sufficient decompression and no apparent instability. In patients with the cervical spondylolysis, myelopathy caused by instability or slippage have been periodically reported. The present case involving C2 spondylolysis is extremely rare. PMID:27340539

  6. The ParA/MinD family puts things in their place.

    PubMed

    Lutkenhaus, Joe

    2012-09-01

    Bacteria must segregate their DNA and position a septum to grow and divide. In many bacteria, MinD is involved in spatial regulation of the cytokinetic Z ring, and ParAs are involved in chromosome and plasmid segregation. The use of the MinD/ParA family to provide positional information for spatial organization continues to expand with the recognition that orphan ParAs are required for segregating cytoplasmic protein clusters and the polar localization of chemotaxis proteins, conjugative transfer machinery, type IV pili, and cellulose synthesis. Also, some bacteria lacking MinD use orphan ParAs to regulate cell division. Positioning of MinD/ParA proteins is either due to self-organization on a surface or reliance on a landmark protein that functions as a molecular beacon.

  7. Status of the Neutron Imaging and Diffraction Instrument IMAT

    NASA Astrophysics Data System (ADS)

    Kockelmann, Winfried; Burca, Genoveva; Kelleher, Joe F.; Kabra, Saurabh; Zhang, Shu-Yan; Rhodes, Nigel J.; Schooneveld, Erik M.; Sykora, Jeff; Pooley, Daniel E.; Nightingale, Jim B.; Aliotta, Francesco; Ponterio, Rosa C.; Salvato, Gabriele; Tresoldi, Dario; Vasi, Cirino; McPhate, Jason B.; Tremsin, Anton S.

    A cold neutron imaging and diffraction instrument, IMAT, is currently being constructed at the ISIS second target station. IMAT will capitalize on time-of-flight transmission and diffraction techniques available at a pulsed neutron source. Analytical techniques will include neutron radiography, neutron tomography, energy-selective neutron imaging, and spatially resolved diffraction scans for residual strain and texture determination. Commissioning of the instrument will start in 2015, with time-resolving imaging detectors and two diffraction detector prototype modules. IMAT will be operated as a user facility for material science applications and will be open for developments of time-of-flight imaging methods.

  8. Correlating sampling and intensity statistics in nanoparticle diffraction experiments

    DOE PAGES

    Öztürk, Hande; Yan, Hanfei; Hill, John P.; Noyan, I. Cevdet

    2015-07-28

    It is shown in a previous article [Öztürk, Yan, Hill & Noyan (2014).J. Appl. Cryst.47, 1016–1025] that the sampling statistics of diffracting particle populations within a polycrystalline ensemble depended on the size of the constituent crystallites: broad X-ray peak breadths enabled some nano-sized particles to contribute more than one diffraction spot to Debye–Scherrer rings. Here it is shown that the equations proposed by Alexander, Klug & Kummer [J. Appl. Phys.(1948),19, 742–753] (AKK) to link diffracting particle and diffracted intensity statistics are not applicable if the constituent crystallites of the powder are below 10 nm. In this size range, (i) themore » one-to-one correspondence between diffracting particles and Laue spots assumed in the AKK analysis is not satisfied, and (ii) the crystallographic correlation between Laue spots originating from the same grain invalidates the assumption that all diffracting plane normals are randomly oriented and uncorrelated. Such correlation produces unexpected results in the selection of diffracting grains. For example, three or more Laue spots from a given grain for a particular reflection can only be observed at certain wavelengths. In addition, correcting the diffracted intensity values by the traditional Lorentz term, 1/cos θ, to compensate for the variation of particles sampled within a reflection band does not maintain fidelity to the number of poles contributing to the diffracted signal. A new term, cos θB/cos θ, corrects this problem.« less

  9. Atoms in parallel fields: Analysis with diffractive periodic orbits

    NASA Astrophysics Data System (ADS)

    Owen, S. M.; Monteiro, T. S.; Dando, P. A.

    2000-11-01

    We show that fluctuations in the density of states of nonhydrogenic atoms in parallel fields are strongly influenced by diffractive periodic orbits. Unlike typical systems with a diffractive point scatterer, the atomic core of small atoms like lithium and helium is best understood as a combined geometric and diffractive scatterer. Each Gutzwiller (geometric) periodic orbit is paired with a diffractive orbit of the same action. We investigate, particularly, amplitudes for contributions from repetitions, and multiple scattering orbits. We find that periodic orbit repetitions are described by ``hybrid'' orbits, combining both diffractive and geometric core scatters, and that by including all possible permutations we can obtain excellent agreement between the semiclassical model and accurate fully quantal calculations. For high repetitions, we find even one-scatter diffractive contributions become of the same order as those of the geometric periodic orbit for repetition numbers n~ħ-1/2. Although the contribution of individual diffractive orbits is suppressed by O(ħ1/2) relative to the geometric periodic orbits, the proliferation of diffractive orbits with increasing period means that the diffractive effect for the atom can persist in the ħ-->0 limit.

  10. On the intensity distribution function of blazed reflective diffraction gratings.

    PubMed

    Casini, R; Nelson, P G

    2014-10-01

    We derive from first principles the expression for the angular/wavelength distribution of the intensity diffracted by a blazed reflective grating, according to a scalar theory of diffraction. We considered the most common case of a groove profile with rectangular apex. Our derivation correctly identifies the geometric parameters of a blazed reflective grating that determine its diffraction efficiency, and fixes an incorrect but commonly adopted expression in the literature. We compare the predictions of this scalar theory with those resulting from a rigorous vector treatment of diffraction from one-dimensional blazed reflective gratings.

  11. Modeling spatially localized photonic nanojets from phase diffraction gratings

    NASA Astrophysics Data System (ADS)

    Geints, Yu. E.; Zemlyanov, A. A.

    2016-04-01

    We investigated numerically the specific spatially localized intense optical structure, a photonic nanojet (PNJ), formed in the near-field scattering of optical radiation at phase diffraction gratings. The finite-difference time-domain technique was employed to study the PNJ key parameters (length, width, focal distance, and intensity) produced by diffraction gratings with the saw-tooth, rectangle, and hemispheric line profiles. Our analysis showed that each type of diffraction gratings produces a photonic jet with unique characteristics. Based on the numerical calculations, we demonstrate that the PNJ could be manipulated in a wide range through the variation of period, duty cycle, and shape of diffraction grating rulings.

  12. Diffraction gratings generating orders with selective states of polarization.

    PubMed

    Davis, Jeffrey A; Moreno, Ignacio; Sánchez-López, María M; Badham, Katherine; Albero, Jorge; Cottrell, Don M

    2016-01-25

    We propose specially designed double anisotropic polarization diffraction gratings capable of producing a selective number of diffraction orders and with selective different states of polarization. Different polarization diffraction gratings are demonstrated, including linear polarization with horizontal, vertical and ± 45° orientations, and circular R and L polarization outputs. When illuminated with an arbitrary state of polarization, the system acts as a complete polarimeter where the intensities of the diffraction orders allow measurement of the Stokes parameters with a single shot. Experimental proof-of-concept is presented using a parallel-aligned liquid crystal display operating in a double pass architecture.

  13. Zeno dynamics in wave-packet diffraction spreading

    SciTech Connect

    Porras, Miguel A.; Luis, Alfredo; Gonzalo, Isabel; Sanz, Angel S.

    2011-11-15

    We analyze a simple and feasible practical scheme displaying Zeno, anti-Zeno, and inverse-Zeno effects in the observation of wave-packet spreading caused by free evolution. The scheme is valid both in spatial diffraction of classical optical waves and in time diffraction of a quantum wave packet. In the optical realization, diffraction spreading is observed by placing slits between a light source and a light-power detector. We show that the occurrence of Zeno or anti-Zeno effects depends just on the frequency of observations between the source and detector. These effects are seen to be related to the diffraction mode theory in Fabry-Perot resonators.

  14. Introduction of acoustical diffraction in the radiative transfer method

    NASA Astrophysics Data System (ADS)

    Reboul, Emeline; Le Bot, Alain; Perret-Liaudet, Joël

    2004-07-01

    This Note presents an original approach to include diffraction in the radiative transfer method when applied to acoustics. This approach leads to a better spatial description of the acoustical energy. An energetic diffraction coefficient and some diffraction sources are introduced to model the diffraction phenomena. The amplitudes of these sources are determined by solving a linear sytem of equations resulting from the power balance between all acoustical sources. The approach is applied on bidimensional examples and gives good results except at geometrical boundaries. To cite this article: E. Reboul et al., C. R. Mecanique 332 (2004).

  15. Measurement of wavefront aberrations of diffractive imaging elements

    NASA Astrophysics Data System (ADS)

    Zajac, Marek; Dubik, Boguslawa

    1998-01-01

    Diffractive optics is more and more widely used nowadays. One of its most important applications is diffractive imaging element (DIE). The DIE can be a lens (Holo-lens, diffractive lens, hybrid lens) or a part of complex imaging system (e.g. an aberration corrector). Apart of such problems occurring when dealing with DIE as its design, manufacture or copying the problem of its control is important. By this we mean the measurement of wavefront generated by DIE, i.e. the evaluation of wavefront aberrations. To this aim we propose two different experimental methods: one of them employs diffraction interferometer, the other one holographic shearing interferometer.

  16. Optically tunable and rewritable diffraction grating with photoaligned liquid crystals.

    PubMed

    Sun, J; Srivastava, A K; Wang, L; Chigrinov, V G; Kwok, H S

    2013-07-01

    An optically tunable and rewritable liquid crystal (LC) diffraction grating cell has been revealed that consists of an optically active and an optically passive alignment layer. The grating profile is created by confining the LC director distribution in alternate planar and twisted alignment domains by means of photoalignment of the LCs. The proposed grating is optically tunable for diffractive and nondiffractive states with a small response time that depends on the exposure energy and LC parameters. In addition, the grating can be erased and rewritten for different diffracting characteristics. These optically tunable diffractive elements could find application in various photonic devices. PMID:23811922

  17. Visible diffraction from quasi-crystalline arrays of carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Butler, Timothy P.; Butt, Haider; Wilkinson, Timothy D.; Amaratunga, Gehan A. J.

    2015-08-01

    Large area arrays of vertically-aligned carbon nanotubes (VACNTs) are patterned in a quasi-crystalline Penrose tile arrangement through electron beam lithography definition of Ni catalyst dots and subsequent nanotube growth by plasma-enhanced chemical vapour deposition. When illuminated with a 532 nm laser beam high-quality and remarkable diffraction patterns are seen. The diffraction is well matched to theoretical calculations which assume apertures to be present at the location of the VACNTs for transmitted light. The results show that VACNTs act as diffractive elements in reflection and can be used as spatially phased arrays for producing tailored diffraction patterns.

  18. Correlating Sampling and Intensity Statistics in Nanoparticle Diffraction Experiments

    SciTech Connect

    Ozturk, Hande; Yan, Hanfei; Hill, John P.; Noyan, I. Cevdet

    2015-08-01

    In this article, [Öztürk, Yan, Hill & Noyan (2014). J. Appl. Cryst. 47, 1016-1025] it was shown that the sampling statistics of diffracting particle populations within a polycrystalline ensemble depended on the size of the constituent crystallites: broad X-ray peak breadths enabled some nano-sized particles to contribute more than one diffraction spot to Debye-Scherrer rings. Here it is shown that the equations proposed by Alexander, Klug & Kummer [J. Appl. Phys. (1948), 19, 742-753] (AKK) to link diffracting particle and diffracted intensity statistics are not applicable if the constituent crystallites of the powder are below 10 nm. In this size range, (i) the one-to-one correspondence between diffracting particles and Laue spots assumed in the AKK analysis is not satisfied, and (ii) the crystallographic correlation between Laue spots originating from the same grain invalidates the assumption that all diffracting plane normals are randomly oriented and uncorrelated. Such correlation produces unexpected results in the selection of diffracting grains. Three or more Laue spots from a given grain for a particular reflection can only be observed at certain wavelengths. In addition, correcting the diffracted intensity values by the traditional Lorentz term, 1/cos [theta], to compensate for the variation of particles sampled within a reflection band does not maintain fidelity to the number of poles contributing to the diffracted signal. A new term, cos [theta]B/cos [theta], corrects this problem.

  19. Eyeglass: A Very Large Aperture Diffractive Space Telescope

    SciTech Connect

    Hyde, R; Dixit, S; Weisberg, A; Rushford, M

    2002-07-29

    Eyeglass is a very large aperture (25-100 meter) space telescope consisting of two distinct spacecraft, separated in space by several kilometers. A diffractive lens provides the telescope's large aperture, and a separate, much smaller, space telescope serves as its mobile eyepiece. Use of a transmissive diffractive lens solves two basic problems associated with very large aperture space telescopes; it is inherently fieldable (lightweight and flat, hence packagable and deployable) and virtually eliminates the traditional, very tight, surface shape tolerances faced by reflecting apertures. The potential drawback to use of a diffractive primary (very narrow spectral bandwidth) is eliminated by corrective optics in the telescope's eyepiece. The Eyeglass can provide diffraction-limited imaging with either single-band, multiband, or continuous spectral coverage. Broadband diffractive telescopes have been built at LLNL and have demonstrated diffraction-limited performance over a 40% spectral bandwidth (0.48-0.72 {micro}m). As one approach to package a large aperture for launch, a foldable lens has been built and demonstrated. A 75 cm aperture diffractive lens was constructed from 6 panels of 1 m thick silica; it achieved diffraction-limited performance both before and after folding. This multiple panel, folding lens, approach is currently being scaled-up at LLNL. We are building a 5 meter aperture foldable lens, involving 72 panels of 700 {micro}m thick glass sheets, diffractively patterned to operate as coherent f/50 lens.

  20. Cell polarity factor Par3 binds SPTLC1 and modulates monocyte serine palmitoyltransferase activity and chemotaxis.

    PubMed

    Tamehiro, Norimasa; Mujawar, Zahedi; Zhou, Suiping; Zhuang, Debbie Z; Hornemann, Thorsten; von Eckardstein, Arnold; Fitzgerald, Michael L

    2009-09-11

    Elevated sphingolipids have been associated with increased cardiovascular disease. Conversely, atherosclerosis is reduced in mice by blocking de novo synthesis of sphingolipids catalyzed by serine palmitoyltransferase (SPT). The SPT enzyme is composed of the SPTLC1 and -2 subunits, and here we describe a novel protein-protein interaction between SPTLC1 and the PDZ protein Par3 (partitioning defective protein 3). Mammalian SPTLC1 orthologs have a highly conserved C terminus that conforms to a type II PDZ protein interaction motif, and by screening PDZ domain protein arrays with an SPTLC1 C-terminal peptide, we found it bound the third PDZ domain of Par3. Overlay and immunoprecipitation assays confirmed this interaction and indicate Par3 is able to associate with the SPTLC1/2 holoenzyme by binding the C-terminal SPTLC1 PDZ motif. The physiologic existence of the SPTLC1/2-Par3 complex was detected in mouse liver and macrophages, and short interfering RNA inhibition of Par3 in human THP-1 monocytes significantly reduced SPT activity and de novo ceramide synthesis by nearly 40%. Given monocyte recruitment into inflamed vessels is thought to promote atherosclerosis, and because Par3 and sphingolipids have been associated with polarized cell migration, we tested whether the ability of THP-1 monocytes to migrate toward MCP-1 (monocyte chemoattractant protein 1) depended upon Par3 and SPTLC1 expression. Knockdown of Par3 significantly reduced MCP1-induced chemotaxis of THP-1 monocytes, as did knockdown of SPTLC1, and this Par3 effect depended upon SPT activity and was blunted by ceramide treatment. In conclusion, protein arrays were used to identify a novel SPTLC1-Par3 interaction that associates with increased monocyte serine palmitoyltransferase activity and chemotaxis toward inflammatory signals. PMID:19592499