75 FR 31377 - Proposed Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-03

... Franklin Parish Police Jury, 6558 Main Street, Winnsboro, LA 71295. Madison Parish, Louisiana, and... Madison Parish Maps are available for inspection at Madison Parish Police Jury, 100 North Cedar Street...

Domain requirements for the Dock adapter protein in growth- cone signaling.

PubMed

Rao, Y; Zipursky, S L

1998-03-03

Tyrosine phosphorylation has been implicated in growth-cone guidance through genetic, biochemical, and pharmacological studies. Adapter proteins containing src homology 2 (SH2) domains and src homology 3 (SH3) domains provide a means of linking guidance signaling through phosphotyrosine to downstream effectors regulating growth-cone motility. The Drosophila adapter, Dreadlocks (Dock), the homolog of mammalian Nck containing three N-terminal SH3 domains and a single SH2 domain, is highly specialized for growth-cone guidance. In this paper, we demonstrate that Dock can couple signals in either an SH2-dependent or an SH2-independent fashion in photoreceptor (R cell) growth cones, and that Dock displays different domain requirements in different neurons.

Assessment of diesel particulate matter exposure in the workplace: freight terminals†

PubMed Central

Sheesley, Rebecca J.; Schauer, James J.; Smith, Thomas J.; Garshick, Eric; Laden, Francine; Marr, Linsey C.; Molina, Luisa T.

2008-01-01

A large study has been undertaken to assess the exposure to diesel exhaust within diesel trucking terminals. A critical component of this assessment is an analysis of the variation in carbonaceous particulate matter (PM) across trucking terminal locations; consistency in the primary sources can be effectively tracked by analyzing trends in elemental carbon (EC) and organic molecular marker concentrations. Ambient samples were collected at yard, dock and repair shop work stations in 7 terminals in the USA and 1 in Mexico. Concentrations of EC ranged from 0.2 to 12 μg m−3 among the terminals, which corresponds to the range seen in the concentration of summed hopanes (0.5 to 20.5 ng m−3). However, when chemical mass balance (CMB) source apportionment results were presented as percent contribution to organic carbon (OC) concentrations, the contribution of mobile sources to OC are similar among the terminals in different cities. The average mobile source percent contribution to OC was 75.3 ± 17.1% for truck repair shops, 65.4 ± 20.4% for the docks and 38.4 ± 9.5% for the terminal yard samples. A relatively consistent mobile source impact was present at all the terminals only when considering percentage of total OC concentrations, not in terms of absolute concentrations. PMID:18392272

Bean peptides have higher in silico binding affinities than ezetimibe for the N-terminal domain of cholesterol receptor Niemann-Pick C1 Like-1.

PubMed

Real Hernandez, Luis M; Gonzalez de Mejia, Elvira

2017-04-01

Niemann-Pick C1 like-1 (NPC1L1) mediates cholesterol absorption at the apical membrane of enterocytes through a yet unknown mechanism. Bean, pea, and lentil proteins are naturally hydrolyzed during digestion to produce peptides. The potential for pulse peptides to have high binding affinities for NPC1L1 has not been determined. In this study , in silico binding affinities and interactions were determined between the N-terminal domain of NPC1L1 and 14 pulse peptides (5≥ amino acids) derived through pepsin-pancreatin digestion. Peptides were docked in triplicate to the N-terminal domain using docking program AutoDock Vina, and results were compared to those of ezetimibe, a prescribed NPC1L1 inhibitor. Three black bean peptides (-7.2 to -7.0kcal/mol) and the cowpea bean dipeptide Lys-Asp (-7.0kcal/mol) had higher binding affinities than ezetimibe (-6.6kcal/mol) for the N-terminal domain of NPC1L1. Lentil and pea peptides studied did not have high binding affinities. The common bean peptide Tyr-Ala-Ala-Ala-Thr (-7.2kcal/mol), which can be produced from black or navy bean proteins, had the highest binding affinity. Ezetimibe and peptides with high binding affinities for the N-terminal domain are expected to interact at different locations of the N-terminal domain. All high affinity black bean peptides are expected to have van der Waals interactions with SER130, PHE136, and LEU236 and a conventional hydrogen bond with GLU238 of NPC1L1. Due to their high affinity for the N-terminal domain of NPC1L1, black and cowpea bean peptides produced in the digestive track have the potential to disrupt interactions between NPC1L1 and membrane proteins that lead to cholesterol absorption. Copyright © 2017 Elsevier Inc. All rights reserved.

STS-74 leaves O&C Building for TCDT

NASA Technical Reports Server (NTRS)

1995-01-01

The STS-74 flight crew walks out of the Operations and Checkout Building on their way to conduct Terminal Countdown Demostration Test (TCDT) exercises while aboard the Space Shuttle orbiter Atlantis at Launch Pad 39A. They are (from right): Mission Commander Kenneth Cameron; Pilot James Halsell; and Mission Specialists William McArthur Jr., Chris Hadfield, and Jerry Ross (back). Hadfield is an international mission specialist representing the Canadian Space Agency. This flight will feature the second docking of the Space Shuttle with the Russian Mir space station. Docking operations will be conducted with the Russian-built Docking Module attached to the end of the Orbiter Docking System (ODS) located in Atlantis payload bay. The DM will be left attached to the Mir when Atlantis undocks. This module will serve as a means to improve future Shuttle-Mir docking operations.

Domain requirements for the Dock adapter protein in growth- cone signaling

PubMed Central

Rao, Yong; Zipursky, S. Lawrence

1998-01-01

Tyrosine phosphorylation has been implicated in growth-cone guidance through genetic, biochemical, and pharmacological studies. Adapter proteins containing src homology 2 (SH2) domains and src homology 3 (SH3) domains provide a means of linking guidance signaling through phosphotyrosine to downstream effectors regulating growth-cone motility. The Drosophila adapter, Dreadlocks (Dock), the homolog of mammalian Nck containing three N-terminal SH3 domains and a single SH2 domain, is highly specialized for growth-cone guidance. In this paper, we demonstrate that Dock can couple signals in either an SH2-dependent or an SH2-independent fashion in photoreceptor (R cell) growth cones, and that Dock displays different domain requirements in different neurons. PMID:9482841

Sedimentation problems in a lateral dock on the Paraná River

NASA Astrophysics Data System (ADS)

Latessa, Gaston; Sabarots Gerbec, Martin; Arecco, Pablo

2017-04-01

The Paraná River is one of the largest water courses in the world and along its reach in the Argentine territory, it receives a large load of sediments from the Pilcomayo and Bermejo Rivers, through the Paraguay River, in the upper basin at the North of Argentina and South of Bolivia. The suspended sediment load is estimated in 100 Million ton/year. This unique characteristic drives the Paraná River morphology downstream, as well as the Paraná delta morphodynamics. On top of its natural behaviour, the Paraná-Paraguay river system is an important inland waterway transport corridor, with a significant amount of sea going vessels and inland barges navigating throughout stretches of more than 3000 Km. Consequently, there are numerous port complexes and terminals along the river banks. The typical wet infrastructure of these terminals is usually composed by jetties and quay walls, and occasionally with side or lateral docks. Whereas, the case included within this study presents all these components. This study presents a hydrodynamic and sedimentology 3D model to predict the velocity fields and the associated shear stresses that will drive morphological processes in the lateral dock. The terminal layout, side dock configuration, and sedimentation issues will be analyzed from multidisciplinary point of view, under different hydrological events and considering the correlated sediment loads. Recent bathymetry studies had been carried out and this set of data will be implemented to build the domain geometry. The flow series is as well extended with the up to date gauged flows and levels, to carry out statistical analysis and identify the design flows for different probabilities. The main objective of this analysis will be to understand and identify the scour and deposition processes and the possible problems to the structures safety and the operation of the docks, and introduce variations to the baseline design, if necessary. Results will be contrasted and validated with empirical formulae and criteria.

40 CFR 62.4624 - Identification of sources.

Code of Federal Regulations, 2011 CFR

2011-07-01

... of sources: The plan includes the following sulfuric acid plants: (1) Agrico Chemical Company in St. James Parish. (2) Allied Chemical Corporation in Ascension and Iberville Parishes. (3) Beker Industries... Nemours & Company, Inc. in Ascension Parish. (6) Freeport Chemical Company in St. James Parish. (7...

40 CFR 62.4624 - Identification of sources.

Code of Federal Regulations, 2012 CFR

2012-07-01

... of sources: The plan includes the following sulfuric acid plants: (1) Agrico Chemical Company in St. James Parish. (2) Allied Chemical Corporation in Ascension and Iberville Parishes. (3) Beker Industries... Nemours & Company, Inc. in Ascension Parish. (6) Freeport Chemical Company in St. James Parish. (7...

40 CFR 62.4624 - Identification of sources.

Code of Federal Regulations, 2013 CFR

2013-07-01

... of sources: The plan includes the following sulfuric acid plants: (1) Agrico Chemical Company in St. James Parish. (2) Allied Chemical Corporation in Ascension and Iberville Parishes. (3) Beker Industries... Nemours & Company, Inc. in Ascension Parish. (6) Freeport Chemical Company in St. James Parish. (7...

40 CFR 62.4624 - Identification of sources.

Code of Federal Regulations, 2010 CFR

2010-07-01

... of sources: The plan includes the following sulfuric acid plants: (1) Agrico Chemical Company in St. James Parish. (2) Allied Chemical Corporation in Ascension and Iberville Parishes. (3) Beker Industries... Nemours & Company, Inc. in Ascension Parish. (6) Freeport Chemical Company in St. James Parish. (7...

40 CFR 62.4624 - Identification of sources.

Code of Federal Regulations, 2014 CFR

2014-07-01

... of sources: The plan includes the following sulfuric acid plants: (1) Agrico Chemical Company in St. James Parish. (2) Allied Chemical Corporation in Ascension and Iberville Parishes. (3) Beker Industries... Nemours & Company, Inc. in Ascension Parish. (6) Freeport Chemical Company in St. James Parish. (7...

Fusion competent synaptic vesicles persist upon active zone disruption and loss of vesicle docking

PubMed Central

Wang, Shan Shan H.; Held, Richard G.; Wong, Man Yan; Liu, Changliang; Karakhanyan, Aziz; Kaeser, Pascal S.

2016-01-01

In a nerve terminal, synaptic vesicle docking and release are restricted to an active zone. The active zone is a protein scaffold that is attached to the presynaptic plasma membrane and opposed to postsynaptic receptors. Here, we generated conditional knockout mice removing the active zone proteins RIM and ELKS, which additionally led to loss of Munc13, Bassoon, Piccolo, and RIM-BP, indicating disassembly of the active zone. We observed a near complete lack of synaptic vesicle docking and a strong reduction in vesicular release probability and the speed of exocytosis, but total vesicle numbers, SNARE protein levels, and postsynaptic densities remained unaffected. Despite loss of the priming proteins Munc13 and RIM and of docked vesicles, a pool of releasable vesicles remained. Thus, the active zone is necessary for synaptic vesicle docking and to enhance release probability, but releasable vesicles can be localized distant from the presynaptic plasma membrane. PMID:27537483

Conformational Dynamics inside Amino-Terminal Disease Hotspot of Ryanodine Receptor

PubMed Central

Zhong, Xiaowei; Liu, Ying; Zhu, Li; Meng, Xing; Wang, Ruiwu; Van Petegem, Filip; Wagenknecht, Terence; Wayne Chen, S. R.; Liu, Zheng

2013-01-01

Summary The N-terminal region of both skeletal and cardiac ryanodine receptor is a disease mutation hotspot. Recently, a crystal structure of the RyR1 fragment (residues 1-559) was solved. This N-terminal structure contains three separate domains, A, B, and C, and was docked into a central vestibule in a full-length RyR1 cryo-EM map. Here we reconstructed 3D cryo-EM structures of two GFP-tagged RyR2s with GFP inserted after residue Glu-310 and Ser-437, respectively. The structures of RyR2E310-GFP and RyR2S437-GFP displayed an extra mass on domain B and C, directly validating the predicted docking model. Next, we revealed domain movements in molecular dynamics flexible fitting models in both the closed and open state cryo-EM maps. To further probe the conformational changes, we generated FRET pairs by inserting CFP or YFP in two selected domains, FRET studies of three dual-insertion pairs and three co-expressed single-insertion pairs showed the dynamic structural changes within the N-terminal domains. PMID:24139989

Ligand-based and structure-based approaches in identifying ideal pharmacophore against c-Jun N-terminal kinase-3.

PubMed

Kumar, B V S Suneel; Kotla, Rohith; Buddiga, Revanth; Roy, Jyoti; Singh, Sardar Shamshair; Gundla, Rambabu; Ravikumar, Muttineni; Sarma, Jagarlapudi A R P

2011-01-01

Structure and ligand based pharmacophore modeling and docking studies carried out using diversified set of c-Jun N-terminal kinase-3 (JNK3) inhibitors are presented in this paper. Ligand based pharmacophore model (LBPM) was developed for 106 inhibitors of JNK3 using a training set of 21 compounds to reveal structural and chemical features necessary for these molecules to inhibit JNK3. Hypo1 consisted of two hydrogen bond acceptors (HBA), one hydrogen bond donor (HBD), and a hydrophobic (HY) feature with a correlation coefficient (r²) of 0.950. This pharmacophore model was validated using test set containing 85 inhibitors and had a good r² of 0.846. All the molecules were docked using Glide software and interestingly, all the docked conformations showed hydrogen bond interactions with important hinge region amino acids (Gln155 and Met149)and these interactions were compared with Hypo1 features. The results of ligand based pharmacophore model (LBPM)and docking studies are validated each other. The structure based pharmacophore model (SBPM) studies have identified additional features, two hydrogen bond donors and one hydrogen bond acceptor. The combination of these methodologies is useful in designing ideal pharmacophore which provides a powerful tool for the discovery of novel and selective JNK3 inhibitors.

A Learning Needs Assessment of Parish Nurses

ERIC Educational Resources Information Center

Tormoehlen, Lucy

2009-01-01

Parish Nursing is relatively new, having its original Scope and Standards from the American Nurses Association published in 1998. At the same time the Basic Preparation Curriculum for Parish Nursing, which had been developed through the International Parish Nurse Resource Center, was distributed to Educational Partners of the Center and used for…

76 FR 79145 - Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2011-12-21

...-AA09 Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA AGENCY..., mile 2.0, St. Tammany Parish, Slidell, LA. The Louisiana Department of Transportation and Development... Rulemaking (NPRM) entitled ``Drawbridge Operation Regulations; Bayou Liberty, mile 2.0, St. Tammany Parish...

78 FR 65747 - Environmental Impact Statement: Adoption: St. Tammany Parish, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-01

...: Adoption: St. Tammany Parish, LA AGENCY: Federal Highway Administration (FHWA), DOT. ACTION: Notice of... District for LA 3241, I-12 to Bush Highway in St. Tammany Parish, Louisiana. The FEIS will be supplemented...), intends to adopt an approved Final EIS for the I-12 to Bush Highway in St. Tammany Parish, Louisiana. The...

The Drosophila SH2-SH3 adapter protein Dock is expressed in embryonic axons and facilitates synapse formation by the RP3 motoneuron.

PubMed

Desai, C J; Garrity, P A; Keshishian, H; Zipursky, S L; Zinn, K

1999-04-01

The Dock SH2-SH3 domain adapter protein, a homolog of the mammalian Nck oncoprotein, is required for axon guidance and target recognition by photoreceptor axons in Drosophila larvae. Here we show that Dock is widely expressed in neurons and at muscle attachment sites in the embryo, and that this expression pattern has both maternal and zygotic components. In motoneurons, Dock is concentrated in growth cones. Loss of zygotic dock function causes a selective delay in synapse formation by the RP3 motoneuron at the cleft between muscles 7 and 6. These muscles often completely lack innervation in late stage 16 dock mutant embryos. RP3 does form a synapse later in development, however, because muscles 7 and 6 are normally innervated in third-instar mutant larvae. The absence of zygotically expressed Dock also results in subtle defects in a longitudinal axon pathway in the embryonic central nervous system. Concomitant loss of both maternally and zygotically derived Dock dramatically enhances these central nervous system defects, but does not increase the delay in RP3 synaptogenesis. These results indicate that Dock facilitates synapse formation by the RP3 motoneuron and is also required for guidance of some interneuronal axons The involvement of Dock in the conversion of the RP3 growth cone into a presynaptic terminal may reflect a role for Dock-mediated signaling in remodeling of the growth cone's cytoskeleton.

Clostridium perfringens Iota-Toxin: Mapping of Receptor Binding and Ia Docking Domains on Ib

PubMed Central

Marvaud, Jean-Christophe; Smith, Theresa; Hale, Martha L.; Popoff, Michel R.; Smith, Leonard A.; Stiles, Bradley G.

2001-01-01

Clostridium perfringens iota-toxin is a binary toxin consisting of iota a (Ia), an ADP-ribosyltransferase that modifies actin, and iota b (Ib), which binds to a cell surface protein and translocates Ia into a target cell. Fusion proteins of recombinant Ib and truncated variants were tested for binding to Vero cells and docking with Ia via fluorescence-activated cytometry and cytotoxicity experiments. C-terminal residues (656 to 665) of Ib were critical for cell surface binding, and truncated Ib variants containing ≥200 amino acids of the C terminus were effective Ib competitors and prevented iota cytotoxicity. The N-terminal domain (residues 1 to 106) of Ib was important for Ia docking, yet this region was not an effective competitor of iota cytotoxicity. Further studies showed that Ib lacking just the N-terminal 27 residues did not facilitate Ia entry into a target cell and subsequent cytotoxicity. Five monoclonal antibodies against Ib were also tested with each truncated Ib variant for epitope and structural mapping by surface plasmon resonance and an enzyme-linked immunosorbent assay. Each antibody bound to a linear epitope within the N terminus (residues 28 to 66) or the C terminus (residues 632 to 655). Antibodies that target the C terminus neutralized in vitro cytotoxicity and delayed the lethal effects of iota-toxin in mice. PMID:11254604

Enhancing capacity among faith-based organizations to implement evidence-based cancer control programs: a community-engaged approach.

PubMed

Leyva, Bryan; Allen, Jennifer D; Ospino, Hosffman; Tom, Laura S; Negrón, Rosalyn; Buesa, Richard; Torres, Maria Idalí

2017-09-01

Evidence-based interventions (EBIs) to promote cancer control among Latinos have proliferated in recent years, though adoption and implementation of these interventions by faith-based organizations (FBOs) is limited. Capacity building may be one strategy to promote implementation. In this qualitative study, 18 community key informants were interviewed to (a) understand existing capacity for health programming among Catholic parishes, (b) characterize parishes' resource gaps and capacity-building needs implementing cancer control EBIs, and (c) elucidate strategies for delivering capacity-building assistance to parishes to facilitate implementation of EBIs. Semi-structured qualitative interviews were conducted. Key informants concurred about the capacity of Catholic parishes to deliver health programs, and described attributes of parishes that make them strong partners in health promotion initiatives, including a mission to address physical and mental health, outreach to marginalized groups, altruism among members, and existing engagement in health programming. However, resource gaps and capacity building needs were also identified. Specific recommendations participants made about how existing resources might be leveraged to address challenges include to: establish parish wellness committees; provide "hands-on" learning opportunities for parishioners to gain program planning skills; offer continuous, tailored, on-site technical assistance; facilitate relationships between parishes and community resources; and provide financial support for parishes. Leveraging parishes' existing resources and addressing their implementation needs may improve adoption of cancer control EBIs.

75 FR 6047 - Announcement of Funding Awards for Fiscal Year 2009 for the Housing Choice Voucher Program

Federal Register 2010, 2011, 2012, 2013, 2014

2010-02-05

...,702 CONCORDIA PARISH POLICE JURY.... 4001 CARTER STREET, ROOM 1, VIDALIA, LA 2 5,014 71373. ST JOHN... PARISH POLICE JURY.... 4001 CARTER STREET, ROOM 1, VIDALIA, LA 0 400 71373. ST JOHN THE BAPTIST PARISH HA... 152 JOE PARQUET CIRCLE, LAPLACE, LA 70068... 0 400 UNION PARISH POLICE JURY........ P. O. BOX 723...

76 FR 43226 - Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2011-07-20

...-AA09 Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA AGENCY... 2.0, at Slidell, St. Tammany Parish, Louisiana. The proposed rule provides for an opening upon one..., mile 2.0, St. Tammany Parish, Slidell, LA with a new modern swing bridge. Due to the fact that not all...

75 FR 71061 - Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-11-22

...-AA09 Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA AGENCY... the S433 bridge over Bayou Liberty, mile 2.0, St. Tammany Parish, Slidell, LA. It will allow the... of the S433 bridge over Bayou Liberty, mile 2.0, St. Tammany Parish, Slidell, LA. This change would...

The docking of chiral analytes on proline-based chiral stationary phases: A molecular dynamics study of selectivity.

PubMed

Ashtari, M; Cann, N M

2015-08-28

Molecular dynamics simulations are employed to examine the selectivity of four proline-based chiral stationary phases in two solvent environments, a relatively apolar n-hexane/2-propanol solvent and a polar water/methanol solvent. The four chiral surfaces are based on a BOC-terminated diproline, a TMA-terminated diproline, a TMA-terminated triproline and a TMA-terminated hexaproline. This range of chiral selectors allows an analysis of the impact of oligomer length and terminal group on selectivity while the two solvent environments indicate the impact of solvent hydrogen bonding and polarity. The selector-analyte interactions are examined for six closely related analytes that each have an aromatic moiety, a hydrogen, and an alcohol group directly bonded to the stereocenter. The analytes differ in the nature of the aromatic group (phenyl or anthracyl), in the attachment point (to the central ring or a side ring in the anthracyl), and in the fourth group bonded to the carbon (CH3, CF3, or C2H5). For each of the 48 solvent+selector+analyte systems, selectivity factors are calculated and, when possible, compared to experiment. The docking mode for these proline-based selectors is analyzed. Copyright © 2015 Elsevier B.V. All rights reserved.

Water Resources of Ascension Parish

USGS Publications Warehouse

Griffith, J.M.; Fendick, R.B.

2009-01-01

Ascension Parish, located along the banks of the Mississippi River in south-central Louisiana, contains fresh groundwater and surface-water resources. In 2005, about 202 million gallons per day (Mgal/d) were withdrawn from water sources in Ascension Parish. About 94 percent (190 Mgal/d) was withdrawn from surface water, and 6 percent (12 Mgal/d) was withdrawn from groundwater. Additional water is supplied to Ascension Parish for public-supply use from East Baton Rouge Parish. Withdrawals for industrial use accounted for 95 percent (192 Mgal/d) of the total water withdrawn. Withdrawals for other uses included public-supply (4 Mgal/d), rural-domestic (3 Mgal/d), and aquaculture (3 Mgal/d). Water withdrawals in the parish generally increased from 1960 to 1995 and decreased from 1995 to 2005. This fact sheet summarizes basic information on the water resources of Ascension Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the references section.

20 CFR 655.502 - Definitions.

Code of Federal Regulations, 2010 CFR

2010-04-01

... Certification (OFLC) means the organizational component within the ETA that provides national leadership and... privately owned terminals, piers, docks, or maritime facilities, which is commonly thought of as a port by...

A Steric-inhibition model for regulation of nucleotide exchange via the Dock180 family of GEFs.

PubMed

Lu, Mingjian; Kinchen, Jason M; Rossman, Kent L; Grimsley, Cynthia; Hall, Matthew; Sondek, John; Hengartner, Michael O; Yajnik, Vijay; Ravichandran, Kodi S

2005-02-22

CDM (CED-5, Dock180, Myoblast city) family members have been recently identified as novel, evolutionarily conserved guanine nucleotide exchange factors (GEFs) for Rho-family GTPases . They regulate multiple processes, including embryonic development, cell migration, apoptotic-cell engulfment, tumor invasion, and HIV-1 infection, in diverse model systems . However, the mechanism(s) of regulation of CDM proteins has not been well understood. Here, our studies on the prototype member Dock180 reveal a steric-inhibition model for regulating the Dock180 family of GEFs. At basal state, the N-terminal SH3 domain of Dock180 binds to the distant catalytic Docker domain and negatively regulates the function of Dock180. Further studies revealed that the SH3:Docker interaction sterically blocks Rac access to the Docker domain. Interestingly, ELMO binding to the SH3 domain of Dock180 disrupted the SH3:Docker interaction, facilitated Rac access to the Docker domain, and contributed to the GEF activity of the Dock180/ELMO complex. Additional genetic rescue studies in C. elegans suggested that the regulation of the Docker-domain-mediated GEF activity by the SH3 domain and its adjoining region is evolutionarily conserved. This steric-inhibition model may be a general mechanism for regulating multiple SH3-domain-containing Dock180 family members and may have implications for a variety of biological processes.

Recruiting and Surveying Catholic Parishes for Cancer Control Initiatives: Lessons Learned From the CRUZA Implementation Study

PubMed Central

Tom, Laura S.; Leyva, Bryan; Rustan, Sarah; Ospino, Hosffman; Negron, Rosalyn; Torres, Maria Idalí; Galeas, Ana V.

2017-01-01

Background We describe activities undertaken to conduct organizational surveys among faith-based organizations (FBOs) in Massachusetts (MA) as part of a larger study designed to promote parish-based cancer control programs for Latinos. Methods Catholic parishes located in MA that provided Spanish-language mass were eligible for study participation. Parishes were identified through diocesan records and online directories. Prior to parish recruitment, we implemented a variety of activities to gain support from Catholic leaders at the Diocesan level. We then recruited individual parishes to complete a four-part organizational survey, which assessed: (A) parish leadership; (B) financial resources; (C) involvement in Hispanic ministry; and (D) health and social service offerings. Our goal was to administer each survey component to a parish representatives who could best provide an organizational perspective on the content of each component (e.g., A=pastors; B= Business Managers; C=Hispanic Ministry Leaders; and D= Parish Nurse or Health Ministry leader. Here, we present descriptive statistics on recruitment and survey administration processes. Results Seventy-five percent of eligible parishes responded to the survey and of these, 92% completed all four components. Completed four-part surveys required an average of 16.6 contact attempts. There were an average of 2.1 respondents per site. Pastoral staff were the most frequent respondents (79%), but also required the most contact attempts (M = 9.3, range = 1 to 27). While most interviews were completed by phone (71%), one-quarter were completed during in-person site visits. Conclusions We achieved a high survey completion rate among organizational representatives. Our lessons learned may inform efforts to engage and survey FBOs for public health efforts. PMID:25878192

STS (Space Transportation System) Task Simulator.

DTIC Science & Technology

1985-08-15

3 Clohessy - Wiltshire Coordinate System • • -1 1- .M 1°... "p ’. -. .’- 0 . _ -~:Q ~. ... . .o. ., 1. INTRODUCTION The Space Transportation System...motion is obtained by applying the Clohessy - Wiltshire equations for terminal rendezvous/docking with the earth modeled as a uni- form sphere...rotational accelerations to the present quaternions. The Clohessy - Wiltshire equations for terminal rendezvous/dockinq are used to model orbital drift

Charged and Hydrophobic Surfaces on the A Chain of Shiga-Like Toxin 1 Recognize the C-Terminal Domain of Ribosomal Stalk Proteins

PubMed Central

McCluskey, Andrew J.; Bolewska-Pedyczak, Eleonora; Jarvik, Nick; Chen, Gang; Sidhu, Sachdev S.; Gariépy, Jean

2012-01-01

Shiga-like toxins are ribosome-inactivating proteins (RIP) produced by pathogenic E. coli strains that are responsible for hemorrhagic colitis and hemolytic uremic syndrome. The catalytic A1 chain of Shiga-like toxin 1 (SLT-1), a representative RIP, first docks onto a conserved peptide SD[D/E]DMGFGLFD located at the C-terminus of all three eukaryotic ribosomal stalk proteins and halts protein synthesis through the depurination of an adenine base in the sarcin-ricin loop of 28S rRNA. Here, we report that the A1 chain of SLT-1 rapidly binds to and dissociates from the C-terminal peptide with a monomeric dissociation constant of 13 µM. An alanine scan performed on the conserved peptide revealed that the SLT-1 A1 chain interacts with the anionic tripeptide DDD and the hydrophobic tetrapeptide motif FGLF within its sequence. Based on these 2 peptide motifs, SLT-1 A1 variants were generated that displayed decreased affinities for the stalk protein C-terminus and also correlated with reduced ribosome-inactivating activities in relation to the wild-type A1 chain. The toxin-peptide interaction and subsequent toxicity were shown to be mediated by cationic and hydrophobic docking surfaces on the SLT-1 catalytic domain. These docking surfaces are located on the opposite face of the catalytic cleft and suggest that the docking of the A1 chain to SDDDMGFGLFD may reorient its catalytic domain to face its RNA substrate. More importantly, both the delineated A1 chain ribosomal docking surfaces and the ribosomal peptide itself represent a target and a scaffold, respectively, for the design of generic inhibitors to block the action of RIPs. PMID:22355345

The RCAN carboxyl end mediates calcineurin docking-dependent inhibition via a site that dictates binding to substrates and regulators

PubMed Central

Martínez-Martínez, Sara; Genescà, Lali; Rodríguez, Antonio; Raya, Alicia; Salichs, Eulàlia; Were, Felipe; López-Maderuelo, María Dolores; Redondo, Juan Miguel; de la Luna, Susana

2009-01-01

Specificity of signaling kinases and phosphatases toward their targets is usually mediated by docking interactions with substrates and regulatory proteins. Here, we characterize the motifs involved in the physical and functional interaction of the phosphatase calcineurin with a group of modulators, the RCAN protein family. Mutation of key residues within the hydrophobic docking-cleft of the calcineurin catalytic domain impairs binding to all human RCAN proteins and to the calcineurin interacting proteins Cabin1 and AKAP79. A valine-rich region within the RCAN carboxyl region is essential for binding to the docking site in calcineurin. Although a peptide containing this sequence compromises NFAT signaling in living cells, it does not inhibit calcineurin catalytic activity directly. Instead, calcineurin catalytic activity is inhibited by a motif at the extreme C-terminal region of RCAN, which acts in cis with the docking motif. Our results therefore indicate that the inhibitory action of RCAN on calcineurin-NFAT signaling results not only from the inhibition of phosphatase activity but also from competition between NFAT and RCAN for binding to the same docking site in calcineurin. Thus, competition by substrates and modulators for a common docking site appears to be an essential mechanism in the regulation of Ca2+-calcineurin signaling. PMID:19332797

CD147 regulates cancer migration via direct interaction with Annexin A2 and DOCK3-β-catenin-WAVE2 signaling.

PubMed

Cui, Hong-Yong; Wang, Shi-Jie; Miao, Ji-Yu; Fu, Zhi-Guang; Feng, Fei; Wu, Jiao; Yang, Xiang-Min; Chen, Zhi-Nan; Jiang, Jian-Li

2016-02-02

The acquisition of inappropriate migratory feature is crucial for tumor metastasis. It has been suggested that CD147 and Annexin A2 are involved in regulating tumor cell movement, while the regulatory mechanisms are far from clear. In this study, we demonstrated that CD147 physically interacted with the N-terminal domain of Annexin A2 and decreased Annexin A2 phosphorylation on tyrosine 23. In vitro kinase assay showed that the I domain of CD147 was indispensable for CD147-mediated downregulation of Annexin A2 phosphorylation by Src. Furthermore, we determined that p-Annexin A2 promoted the expression of dedicator of cytokinesis 3 (DOCK3) and DOCK3 blocked β-catenin nuclear translocation, resulting in inhibition of β-catenin signaling. In addition, DOCK3 inhibited lamellipodium dynamics and tumor cell movement. Also, we found that β-catenin signaling increased WAVE2 expression. Therefore, DOCK3 was characterized as a negative regulator of WAVE2 expression via inhibiting β-catenin signaling. Our study provides the first evidence that CD147 promotes tumor cell movement and metastasis via direct interaction with Annexin A2 and DOCK3-β-catenin-WAVE2 signaling axis.

STS-86 crew member Wolf dons a gas mask during TCDT

NASA Technical Reports Server (NTRS)

1997-01-01

STS-86 Mission Specialist David A. Wolf dons a gas mask as part of training exercises during the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. Wolf is wearing the patch from his first and only mission to date, STS-58 in 1993. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the docking, Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25.

Experiences of Parish Nurses in Providing Diabetes Education and Preconception Counseling to Women With Diabetes.

PubMed

Devido, Jessica A; Doswell, Willa M; Braxter, Betty J; Spatz, Diane L; Dorman, Janice S; Terry, Martha Ann; Charron-Prochownik, Denise

To explore the role and experiences of the parish nurse in providing diabetes education and preconception counseling to women with diabetes. Mixed-methods concurrent embedded design. Focus groups of community-based parish nurses accessed from a regional database (Pennsylvania, Florida, Ohio, New York, Arizona, and Minnesota). Forty-eight parish nurses recruited from the Parish Nurse and Health Ministry Program database in Western Pennsylvania. The primary method was focus groups using face-to-face, teleconference, and videoconferencing formats. A secondary method used a quantitative descriptive design with three self-report measures (demographic, preconception counseling self-efficacy, and preconception counseling knowledge). Qualitative content analysis techniques were conducted and combined with descriptive analysis. Forty-eight parish nurses participated in 1 of 11 focus groups. Eight qualitative themes emerged: Awareness, Experience, Formal Training, Usefulness, Willingness, Confidence, "Wise Women," and Preconception Counseling Tool for Patients. Participants provided recommendations for training and resources to increase their knowledge and skills. Parish nurses' knowledge scores were low (mean = 66%, range = 40%-100%) with only moderate levels of self-efficacy (mean = 99, range = 27-164). Self-efficacy had a significantly positive association with knowledge (r = .29, p = .05). Quantitative results were consistent with participants' qualitative statements. Parish nurses were unaware of preconception counseling and lacked knowledge and teaching self-efficacy as it related to preconception counseling and diabetes education. Understanding parish nurses' experiences with women with diabetes and identifying their needs to provide education and preconception counseling will help tailor training interventions that could affect maternal and fetal outcomes. Copyright © 2017 AWHONN, the Association of Women’s Health, Obstetric and Neonatal Nurses. Published by Elsevier Inc. All rights reserved.

Stormwater Pollutant Control from Critical Source Areas

EPA Science Inventory

Critical source areas include: vehicular maintenance facilities, parking lots and bus terminals, junk and lumber yards, industrial storage facilities, loading docks and refueling areas, manufacturing sites, etc. Addressing pollutant runoff from these areas is an important compon...

The effect of Hurricane Katrina: births in the U.S. Gulf Coast region, before and after the storm.

PubMed

Hamilton, Brady E; Sutton, Paul D; Mathews, T J; Martin, Joyce A; Ventura, Stephanie J

2009-08-28

This report presents birth data for the region affected by Hurricane Katrina, which made landfall along the Gulf Coast of the United States on August 29, 2005, comparing the 12-month periods before and after the storm according to a wide variety of characteristics. Data are presented for maternal demographic characteristics including age, race, Hispanic origin, marital status, and educational attainment; medical care utilization by pregnant women (prenatal care and method of delivery); and infant characteristics or birth outcomes (period of gestation and birthweight). Descriptive tabulations of data reported on the birth certificates of residents of the 91 Federal Emergency Management Agency (FEMA)-designated counties and parishes of Alabama, Louisiana, and Mississippi are presented for the 12-month periods before and after Hurricane Katrina struck, from August 29, 2004, through August 28, 2006. Detailed data are shown separately for 14 selected, FEMA-designated coastal counties and parishes within a 100-mile radius of the Hurricane Katrina storm path, the area hit very hard by the storm and subsequent flooding. These 14 selected coastal counties and parishes are a subset of the 91 FEMA-designated counties and parishes. The total number of births in the 14 selected FEMA-designated counties and parishes decreased 19 percent in the 12 months after Hurricane Katrina compared with the 12 months before, with births declining in the selected counties and parishes of Louisiana and Mississippi and rising in the counties of Alabama. The number of births to non-Hispanic black women in the selected parishes of Louisiana fell substantially after Hurricane Katrina; births declined for non-Hispanic white, Hispanic, and Asian or Pacific Islander women in these selected parishes as well. The percentage of births to women under age 20 years for the selected counties and parishes after the storm was essentially unchanged in Alabama and Mississippi, but decreased in Louisiana. The proportion of births to unmarried women decreased in the selected parishes of Louisiana, but increased in the selected counties elsewhere. Large decreases were observed in very preterm and very low birthweight rates for the selected parishes of Louisiana following Hurricane Katrina, whereas a large increase was observed in very preterm births for the selected counties of Alabama.

GEMINI-TITAN (GT)-9 PREFLIGHT ACTIVITY - ASTRONAUT THOMAS P. STAFFORD - MISC. - KSC

NASA Image and Video Library

1969-01-21

S66-32044 (17 May 1966) --- Astronauts Eugene A. Cernan (left), pilot, and Thomas P. Stafford, command pilot, discuss the postponed Gemini-9 mission just after egressing their spacecraft in the white room atop Pad 19. The Agena Target Vehicle failed to achieve orbit, causing a termination of the mission. The spaceflight (to be called Gemini-9A) has been rescheduled for May 31. A Gemini Augmented Target Docking Adapter will be used as the rendezvous and docking vehicle for the Gemini-9 spacecraft. Photo credit: NASA

78 FR 70318 - Cat Island National Wildlife Refuge; West Feliciana Parish, Louisiana; Notice of Intent To...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-11-25

...-FF04R02000] Cat Island National Wildlife Refuge; West Feliciana Parish, Louisiana; Notice of Intent To... comprehensive conservation plan (CCP) and associated National Environmental Policy Act (NEPA) documents for Cat... NEPA documents for Cat Island National Wildlife Refuge NWR, West Feliciana Parish, Louisiana, in a...

75 FR 16007 - Drawbridge Operation Regulation; Lower Grand River, Iberville Parish, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-31

... minutes to the end of the morning scheduled closure period to provide more time for school buses to... scheduled closure period to provide more time for school buses to transit across the bridge. Extra time is... 75 pontoon bridge, mile 38.4, in Iberville Parish, Louisiana. The Iberville Parish School Board...

Water resources of Iberia Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2017-02-24

IntroductionInformation concerning the availability, use, and quality of water in Iberia Parish, Louisiana, is critical for proper water-resource management. This fact sheet summarizes the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish for water managers, parish residents, and others to assist in stewardship of this vital resource. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System are the primary sources of the information presented here.In 2010, about 31.24 million gallons per day (Mgal/d) of water were withdrawn in Iberia Parish, Louisiana, including about 23.13 Mgal/d from groundwater sources and 8.11 Mgal/d from surface-water sources. Withdrawals for public supply and industrial use each accounted for about 32 percent of the total water withdrawn. Other water-use categories included rural domestic, livestock, rice irrigation, general irrigation, and aquaculture. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that water withdrawals in Iberia Parish peaked at about 58.57 Mgal/d in 1975.

CD147 regulates cancer migration via direct interaction with Annexin A2 and DOCK3-β-catenin-WAVE2 signaling

PubMed Central

Feng, Fei; Wu, Jiao; Yang, Xiang-Min; Chen, Zhi-Nan; Jiang, Jian-Li

2016-01-01

The acquisition of inappropriate migratory feature is crucial for tumor metastasis. It has been suggested that CD147 and Annexin A2 are involved in regulating tumor cell movement, while the regulatory mechanisms are far from clear. In this study, we demonstrated that CD147 physically interacted with the N-terminal domain of Annexin A2 and decreased Annexin A2 phosphorylation on tyrosine 23. In vitro kinase assay showed that the I domain of CD147 was indispensable for CD147-mediated downregulation of Annexin A2 phosphorylation by Src. Furthermore, we determined that p-Annexin A2 promoted the expression of dedicator of cytokinesis 3 (DOCK3) and DOCK3 blocked β-catenin nuclear translocation, resulting in inhibition of β-catenin signaling. In addition, DOCK3 inhibited lamellipodium dynamics and tumor cell movement. Also, we found that β-catenin signaling increased WAVE2 expression. Therefore, DOCK3 was characterized as a negative regulator of WAVE2 expression via inhibiting β-catenin signaling. Our study provides the first evidence that CD147 promotes tumor cell movement and metastasis via direct interaction with Annexin A2 and DOCK3-β-catenin-WAVE2 signaling axis. PMID:26716413

Water Resources of Rapides Parish

USGS Publications Warehouse

Griffith, J.M.

2009-01-01

Rapides Parish, located in central Louisiana, contains fresh groundwater and surface-water resources. In 2005, about 443 million gallons per day (Mgal/d) were withdrawn from water sources in Rapides Parish. About 92 percent (409 Mgal/d) was withdrawn from surface water, and 8 percent (34 Mgal/d) was withdrawn from groundwater. Withdrawals for power generation accounted for 91 percent (403 Mgal/d) of the total water withdrawn. Withdrawals for other uses included public supply (27 Mgal/d), irrigation (9 Mgal/d), and aquaculture (3 Mgal/d). Water withdrawals in the parish generally increased from 1960 to 1995 and decreased from 1995 to 2005. This fact sheet summarizes basic information on the water resources of Rapides Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the references section.

Parish apprenticeship and the old poor law in London1

PubMed Central

Levene, Alysa

2010-01-01

This article offers an examination of the patterns and motivations behind parish apprenticeship in late eighteenth- and early nineteenth-century London. It stresses continuity in outlook from parish officials binding children, which involved placements in both the traditional and industrializing sectors of the economy. Evidence on the ages, employment types, and locations of 3,285 pauper apprentices bound from different parts of London between 1767 and 1833 indicates a variety of local patterns. The analysis reveals a pattern of youthful age at binding, a range of employment experiences, and parish-specific links to particular trades and manufactures. PMID:20939134

Parish apprenticeship and the old poor law in London.

PubMed

Levene, Alysa

2010-01-01

This article offers an examination of the patterns and motivations behind parish apprenticeship in late eighteenth- and early nineteenth-century London. It stresses continuity in outlook from parish officials binding children, which involved placements in both the traditional and industrializing sectors of the economy. Evidence on the ages, employment types, and locations of 3,285 pauper apprentices bound from different parts of London between 1767 and 1833 indicates a variety of local patterns. The analysis reveals a pattern of youthful age at binding, a range of employment experiences, and parish-specific links to particular trades and manufactures.

Water resources of Tangipahoa Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2016-07-25

Information concerning the availability, use, and quality of water in Tangipahoa Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of St. Helena Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2016-07-27

Information concerning the availability, use, and quality of water in St. Helena Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Livingston Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2016-07-27

Information concerning the availability, use, and quality of water in Livingston Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of East Feliciana Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2017-01-12

Information concerning the availability, use, and quality of water in East Feliciana Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information is presented on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Orleans Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.; Lovelace, John K.

2014-01-01

Information concerning the availability, use, and quality of water in Orleans Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Caldwell Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.

2014-01-01

Information concerning the availability, use, and quality of water in Caldwell Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of St. James Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2015-01-01

Information concerning the availability, use, and quality of water in St. James Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Vermilion Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.

2014-01-01

Information concerning the availability, use, and quality of water in Vermilion Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of St. Mary Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.; Lovelace, John K.

2014-01-01

Information concerning the availability, use, and quality of water in St. Mary Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for management of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of De Soto Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.

2014-01-01

Information concerning the availability, use, and quality of water in De Soto Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata. usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Jefferson Davis Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2014-01-01

Information concerning the availability, use, and quality of water in Jefferson Davis Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of St. Charles Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2015-01-01

Information concerning the availability, use, and quality of water in St. Charles Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Terrebonne Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; Lovelace, John K.; White, Vincent E.

2014-01-01

Information concerning the availability, use, and quality of water in Terrebonne Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends,and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System http://waterdata.usgs.gov/nwis are the primary sources of the information presented here.

Water resources of Acadia Parish, Louisiana

USGS Publications Warehouse

Prakken, Larry B.; White, Vincent E.

2014-01-01

Information concerning the availability, use, and quality of water in Acadia Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of La Salle Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2015-01-01

Information concerning the availability, use, and quality of water in La Salle Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Sabine Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; White, Vincent E.; Lovelace, John K.

2014-01-01

Information concerning the availability, use, and quality of water in Sabine Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s (USGS) National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of West Feliciana Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; Lovelace, John K.; Tomaszewski, Dan J.; Griffith, Jason M.

2014-01-01

Information concerning the availability, use, and quality of water in West Feliciana Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is discussed. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

STK/RON receptor tyrosine kinase mediates both apoptotic and growth signals via the multifunctional docking site conserved among the HGF receptor family.

PubMed Central

Iwama, A; Yamaguchi, N; Suda, T

1996-01-01

STK/RON tyrosine kinase, a member of the hepatocyte growth factor (HGF) receptor family, is a receptor for macrophage-stimulating protein (MSP). To examine the STK/RON signalling pathway, we generated STK/ RON transfectants showing opposite features in growth. STK/RON-expressing Ba/F3 pro-B cells (BaF/STK) exhibited MSP-dependent growth, whereas STK/ RON-expressing mouse erythroleukaemia cells (MEL/ STK) displayed MSP-induced apoptosis. This apoptosis was accompanied by the prolonged activation of c-Jun N-terminal kinase (JNK), which has recently been implicated in the initiation of apoptosis. Co-immunoprecipitation analyses showed that autophosphorylated STK/RON associated with PLC-gamma, P13-kinase, Shc and Grb2 in both transfectants. However, major tyrosine-phosphorylated proteins, p61 and p65, specifically associated with STK/RON in MEL/STK cells. Mutations at two C-terminal tyrosine residues, Y1330 and Y1337, in the counterpart of the multifunctional docking site of the HGF receptor abolished both MSP-induced growth and apoptosis. Analyses of these mutants and in vitro association revealed that signalling proteins including p61 and p65 directly bound to the phosphotyrosines in the multifunctional docking site. These results demonstrate that positive or negative signals toward cell growth are generated through the multifunctional docking site and suggest the involvement of p61 and p65 as well as JNK in apoptosis. Our findings provide the first evidence for apoptosis via a receptor tyrosine kinase. Images PMID:8918464

Membrane-bound human orphan cytochrome P450 2U1: Sequence singularities, construction of a full 3D model, and substrate docking.

PubMed

Ducassou, Lionel; Dhers, Laura; Jonasson, Gabriella; Pietrancosta, Nicolas; Boucher, Jean-Luc; Mansuy, Daniel; André, François

2017-09-01

Human cytochrome P450 2U1 (CYP2U1) is an orphan CYP that exhibits several distinctive characteristics among the 57 human CYPs with a highly conserved sequence in almost all living organisms. We compared its protein sequence with those of the 57 human CYPs and constructed a 3D structure of a full-length CYP2U1 model bound to a POPC membrane. We also performed docking experiments of arachidonic acid (AA) and N-arachidonoylserotonin (AS) in this model. The protein sequence of CYP2U1 displayed two unique characteristics when compared to those of the human CYPs, the presence of a longer N-terminal region upstream of the putative trans-membrane helix (TMH) containing 8 proline residues, and of an insert of about 20 amino acids containing 5 arginine residues between helices A' and A. Its N-terminal part upstream of TMH involved an additional short terminal helix, in a manner similar to what was reported in the crystal structure of Saccharomyces cerevisiae CYP51. Our model also showed a specific interaction between the charged residues of insert AA' and phosphate groups of lipid polar heads, suggesting a possible role of this insert in substrate recruitment. Docking of AA and AS in this model showed these substrates in channel 2ac, with the terminal alkyl chain of AA or the indole ring of AS close to the heme, in agreement with the reported CYP2U1-catalyzed AA and AS hydroxylation regioselectivities. This model should be useful to find new endogenous or exogenous CYP2U1 substrates and to interpret the regioselectivity of their hydroxylation. Copyright © 2017 Elsevier B.V. and Société Française de Biochimie et Biologie Moléculaire (SFBBM). All rights reserved.

75 FR 20608 - Notice of Re-Designation of the Service Delivery Area for the Cowlitz Indian Tribe

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-20

..., Louisiana Grand Parish, LA,\\22\\ LaSalle Parish, LA, Rapides Parish, LA. Jicarilla Apache Nation, New Mexico... Mexico. NM. Miccosukee Tribe of Indians of Florida. Broward, FL, Collier, FL, Miami- Dade, FL, Hendry, FL.... Narragansett Indian Tribe of Rhode Washington, RI.\\32\\ Island. Navajo Nation, Arizona, New Mexico and Apache...

Seminarian Perspectives on Catholic Schools and the New Evangelization

ERIC Educational Resources Information Center

Simonds, Thomas A.; Brock, Barbara L.; Cook, Timothy Jay; Engel, Max

2017-01-01

Recognizing that pastors of parishes with a Catholic school play a vital role in Catholic education, and that the seminarians of today will be the parish pastors of tomorrow, this study sought to provide a better understanding of the perceptions held by Catholic seminarians about parish schools. Fourteen seminary students from 12 seminaries and 14…

41 CFR 102-173.60 - What is the naming convention for Counties or Parishes?

Code of Federal Regulations, 2014 CFR

2014-01-01

... TELECOMMUNICATIONS 173-INTERNET GOV DOMAIN Registration § 102-173.60 What is the naming convention for Counties or Parishes? (a) To register any second-level domain within dot-gov, County or Parish governments must.... Examples of preferred domain names include— (1) Richmondcounty-ga.gov; (2) Pwc-county-va.gov; and (3...

41 CFR 102-173.60 - What is the naming convention for Counties or Parishes?

Code of Federal Regulations, 2012 CFR

2012-01-01

... TELECOMMUNICATIONS 173-INTERNET GOV DOMAIN Registration § 102-173.60 What is the naming convention for Counties or Parishes? (a) To register any second-level domain within dot-gov, County or Parish governments must.... Examples of preferred domain names include— (1) Richmondcounty-ga.gov; (2) Pwc-county-va.gov; and (3...

41 CFR 102-173.60 - What is the naming convention for Counties or Parishes?

Code of Federal Regulations, 2013 CFR

2013-07-01

... TELECOMMUNICATIONS 173-INTERNET GOV DOMAIN Registration § 102-173.60 What is the naming convention for Counties or Parishes? (a) To register any second-level domain within dot-gov, County or Parish governments must.... Examples of preferred domain names include— (1) Richmondcounty-ga.gov; (2) Pwc-county-va.gov; and (3...

41 CFR 102-173.60 - What is the naming convention for Counties or Parishes?

Code of Federal Regulations, 2010 CFR

2010-07-01

... TELECOMMUNICATIONS 173-INTERNET GOV DOMAIN Registration § 102-173.60 What is the naming convention for Counties or Parishes? (a) To register any second-level domain within dot-gov, County or Parish governments must.... Examples of preferred domain names include— (1) Richmondcounty-ga.gov; (2) Pwc-county-va.gov; and (3...

41 CFR 102-173.60 - What is the naming convention for Counties or Parishes?

Code of Federal Regulations, 2011 CFR

2011-01-01

... TELECOMMUNICATIONS 173-INTERNET GOV DOMAIN Registration § 102-173.60 What is the naming convention for Counties or Parishes? (a) To register any second-level domain within dot-gov, County or Parish governments must.... Examples of preferred domain names include— (1) Richmondcounty-ga.gov; (2) Pwc-county-va.gov; and (3...

CONTEXT VIEW ALONG EXISTING PERIMETER TRACKS LOOKING OVER IRON ORE ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

CONTEXT VIEW ALONG EXISTING PERIMETER TRACKS LOOKING OVER IRON ORE CARS TOWARDS CLEVELAND BULK TERMINAL BUILDINGS. LOOKING SOUTH. - Pennsylvania Railway Ore Dock, Lake Erie at Whiskey Island, approximately 1.5 miles west of Public Square, Cleveland, Cuyahoga County, OH

The Ste20 kinase misshapen regulates both photoreceptor axon targeting and dorsal closure, acting downstream of distinct signals.

PubMed

Su, Y C; Maurel-Zaffran, C; Treisman, J E; Skolnik, E Y

2000-07-01

We have previously shown that the Ste20 kinase encoded by misshapen (msn) functions upstream of the c-Jun N-terminal kinase (JNK) mitogen-activated protein kinase module in Drosophila. msn is required to activate the Drosophila JNK, Basket (Bsk), to promote dorsal closure of the embryo. A mammalian homolog of Msn, Nck interacting kinase, interacts with the SH3 domains of the SH2-SH3 adapter protein Nck. We now show that Msn likewise interacts with Dreadlocks (Dock), the Drosophila homolog of Nck. dock is required for the correct targeting of photoreceptor axons. We have performed a structure-function analysis of Msn in vivo in Drosophila in order to elucidate the mechanism whereby Msn regulates JNK and to determine whether msn, like dock, is required for the correct targeting of photoreceptor axons. We show that Msn requires both a functional kinase and a C-terminal regulatory domain to activate JNK in vivo in Drosophila. A mutation in a PXXP motif on Msn that prevents it from binding to the SH3 domains of Dock does not affect its ability to rescue the dorsal closure defect in msn embryos, suggesting that Dock is not an upstream regulator of msn in dorsal closure. Larvae with only this mutated form of Msn show a marked disruption in photoreceptor axon targeting, implicating an SH3 domain protein in this process; however, an activated form of Msn is not sufficient to rescue the dock mutant phenotype. Mosaic analysis reveals that msn expression is required in photoreceptors in order for their axons to project correctly. The data presented here genetically link msn to two distinct biological events, dorsal closure and photoreceptor axon pathfinding, and thus provide the first evidence that Ste20 kinases of the germinal center kinase family play a role in axonal pathfinding. The ability of Msn to interact with distinct classes of adapter molecules in dorsal closure and photoreceptor axon pathfinding may provide the flexibility that allows it to link to distinct upstream signaling systems.

The Ste20 Kinase Misshapen Regulates Both Photoreceptor Axon Targeting and Dorsal Closure, Acting Downstream of Distinct Signals

PubMed Central

Su, Yi-Chi; Maurel-Zaffran, Corinne; Treisman, Jessica E.; Skolnik, Edward Y.

2000-01-01

We have previously shown that the Ste20 kinase encoded by misshapen (msn) functions upstream of the c-Jun N-terminal kinase (JNK) mitogen-activated protein kinase module in Drosophila. msn is required to activate the Drosophila JNK, Basket (Bsk), to promote dorsal closure of the embryo. A mammalian homolog of Msn, Nck interacting kinase, interacts with the SH3 domains of the SH2-SH3 adapter protein Nck. We now show that Msn likewise interacts with Dreadlocks (Dock), the Drosophila homolog of Nck. dock is required for the correct targeting of photoreceptor axons. We have performed a structure-function analysis of Msn in vivo in Drosophila in order to elucidate the mechanism whereby Msn regulates JNK and to determine whether msn, like dock, is required for the correct targeting of photoreceptor axons. We show that Msn requires both a functional kinase and a C-terminal regulatory domain to activate JNK in vivo in Drosophila. A mutation in a PXXP motif on Msn that prevents it from binding to the SH3 domains of Dock does not affect its ability to rescue the dorsal closure defect in msn embryos, suggesting that Dock is not an upstream regulator of msn in dorsal closure. Larvae with only this mutated form of Msn show a marked disruption in photoreceptor axon targeting, implicating an SH3 domain protein in this process; however, an activated form of Msn is not sufficient to rescue the dock mutant phenotype. Mosaic analysis reveals that msn expression is required in photoreceptors in order for their axons to project correctly. The data presented here genetically link msn to two distinct biological events, dorsal closure and photoreceptor axon pathfinding, and thus provide the first evidence that Ste20 kinases of the germinal center kinase family play a role in axonal pathfinding. The ability of Msn to interact with distinct classes of adapter molecules in dorsal closure and photoreceptor axon pathfinding may provide the flexibility that allows it to link to distinct upstream signaling systems. PMID:10848599

Dissemination of evidence-based cancer control interventions among Catholic faith-based organizations: results from the CRUZA randomized trial.

PubMed

Allen, Jennifer D; Torres, Maria Idalí; Tom, Laura S; Leyva, Bryan; Galeas, Ana V; Ospino, Hosffman

2016-05-18

The CRUZA randomized trial tested the efficacy of an organizational-level intervention to increase the capacity of Catholic faith-based organizations (FBOs) serving Latinos to implement evidence-based strategies (EBS) for cancer control. Thirty-one Catholic parishes were enrolled. Twenty were randomized to a "capacity enhancement" (CE) intervention and 11 to a "standard dissemination" (SD) condition. Each received a Program Implementation Manual and Toolkit of materials culturally adapted for FBOs with Latino audiences for five types of EBS recommended by the US Preventive Services Community Guide. CE parishes were offered a menu of capacity-building activities over a 3-month period, while SD parishes were provided a one-time consultation by an Intervention Specialist. Baseline and follow-up surveys compared the number and types of EBS offered. At baseline, only one parish had offered any cancer-related program in the prior year, yet a third (36 %) had offered some other type of health program or service. At post-intervention follow-up, all parishes offered a greater number of EBS. The only statistically significant difference between CE and SD groups was the number of parishes offering small media interventions (90 % in CE, 64 % in SD; p < 0.05). All parishes increased the number of cancer control activities offered to their members. These findings suggest that Catholic parishes may already have capacity to implement EBS if they are appropriately adapted and packaged and may only require low levels of support to carry out programming. Further research is needed to examine the extent to which program offerings continued after the period of grant funding. Clinicaltrials.gov NCT01740219 .

Water Resources of Lafayette Parish

USGS Publications Warehouse

Fendick, Robert B.; Griffith, Jason M.; Prakken, Lawrence B.

2011-01-01

Fresh groundwater and surface water resources are available in Lafayette Parish, which is located in south-central Louisiana. In 2005, more than 47 million gallons per day (Mgal/d) were withdrawn from water sources in Lafayette Parish. About 92 percent (43.7 Mgal/d) of withdrawals was groundwater, and 8 percent (3.6 Mgal/d) was surface water. Public-supply withdrawals accounted for nearly 49 percent (23 Mgal/d) of the total groundwater use, with the cities of Lafayette and Carencro using about 21 Mgal/d. Withdrawals for other uses included about 10.4 Mgal/d for rice irrigation and about 8.4 Mgal/d for aquaculture. Water withdrawals in Lafayette Parish increased from 33 Mgal/d in 1995 to about 47 Mgal/d in 2005. This fact sheet summarizes information on the water resources of Lafayette Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the references section.

Cultural Resources Survey of the Burnside Revetment Item, Ascension and St. James Parishes, Louisiana.

DTIC Science & Technology

1986-08-27

he finds.. .that (parish) of Cantrelle... Each of those four communities (the parishes of Clesets Rouges , Cote des Allemands, Bonnet Carre, and...tne vicinity of Whitehall (Office of Public Works, Baton Rouge ) ........................................... 34 9. Excerpt from the 1877 Mississippi... Rouge )............................................ 62 14. Excerpt from Chart 50, Levee setback maps, Pontchartrain Levee District, ca. 1926, showing a

Domestic violence and the role of the parish nurse.

PubMed

Routson, Janet L; Hinton, Sharon T

2010-01-01

Domestic violence is physical, sexual, or psychological violence within intimate relationships. The identification of victims--adults, children, elders, males, or females-is problematic. Parish nurses are in an ideal position to identify and help those experiencing domestic violence. The Initial Domestic Violence Assessment Guideline (2010 J. Routson) provides parameters for the parish nurse to gather data and design helpful interventions.

Water resources of West Baton Rouge Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2016-11-23

Information concerning the availability, use, and quality of water in West Baton Rouge Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of Calcasieu Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2017-01-12

Information concerning the availability, use, and quality of water in Calcasieu Parish, Louisiana, is critical for proper water-resource management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://dx.doi.org/10.5066/F7P55KJN) are the primary sources of the information presented here.

Water resources of East Baton Rouge Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2015-01-01

Information concerning the availability, use, and quality of water in East Baton Rouge Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Water resources of St. John the Baptist Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.; Fendick, Robert B.

2015-01-01

Information concerning the availability, use, and quality of water in St. John the Baptist Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here.

Molecular scaffold reorganization at the transmitter release site with vesicle exocytosis or botulinum toxin C1.

PubMed

Stanley, Elise F; Reese, Tom S; Wang, Gary Z

2003-10-01

Neurotransmitter release sites at the freeze-fractured frog neuromuscular junction are composed of inner and outer paired rows of large membrane particles, the putative calcium channels, anchored by the ribs of an underlying protein scaffold. We analysed the locations of the release site particles as a reflection of the scaffold structure, comparing particle distributions in secreting terminals with those where secretion was blocked with botulinum toxin A, which cleaves a small segment off SNAP-25, or botulinum toxin C1, which cleaves the cytoplasmic domain of syntaxin. In the idle terminal the inner and outer paired rows were located approximately 25 and approximately 44 nm, respectively, from the release site midline. However, adjacent to vesicular fusion sites both particle rows were displaced towards the midline by approximately 25%. The intervals between the particles along each row were examined by a nearest-neighbour approach. In control terminals the peak interval along the inner row was approximately 17 nm, consistent with previous reports and the spacing of the scaffold ribs. While the average distance between particles in the outer row was also approximately 17 nm, a detailed analysis revealed short 'linear clusters' with a approximately 14 nm interval. These clusters were enriched at vesicle fusion sites, suggesting an association with the docking sites, and were eliminated by botulinum C1, but not A. Our findings suggest, first, that the release site scaffold ribs undergo a predictable, and possibly active, shortening during exocytosis and, second, that at the vesicle docking site syntaxin plays a role in the cross-linking of the rib tips to form the vesicle docking sites.

Sustainability of Catholic Parish Elementary Schools in the Twenty-First Century and the Driving Forces of Leadership

ERIC Educational Resources Information Center

Killeen, Ryan

2017-01-01

The most prevalent model of Catholic schools has always been and remains the parish elementary school. Catholic schools are not simply private schools but a faith based arm of a larger parish. The interconnected leadership of schools by pastors and principals is at the core of understanding the model and inseparable in long-term viability. The…

Public Education in the Russian Empire during the Last Third of the XIX Century: Parish Schools

ERIC Educational Resources Information Center

Cherkasov, Aleksandr A.; Smigel, Michal

2016-01-01

The article deals with the parish schools development in Russia in the last third of the XIX century. Particular attention is paid to the analysis of the church school development during the period of office of I. D. Delyanov as the Minister of Education (1880-1890) and the transition of the parish and peasant literacy schools under the…

The Lincoln Parish Family Planning Program and Its Implications for Reducing Reproductive Wastage in the Rural Poor.

ERIC Educational Resources Information Center

Beasley, Joseph D.; And Others

The Lincoln Parish Family Planning Program, a 1968 pilot study designed in cooperation with the Louisiana State Board of Health, is described. The major purpose of the program was to design a program of medical care for the rural poor which would provide mothers in Lincoln Parish with information and services needed to plan family size. Sections…

Water Resources of Ouachita Parish

USGS Publications Warehouse

Tomaszewski, Dan J.; Lovelace, John K.; Griffith, Jason M.

2009-01-01

Ouachita Parish, located in north-central Louisiana, contains fresh groundwater and surface-water resources. In 2005, about 152 million gallons per day (Mgal/d) were withdrawn from water sources in Ouachita Parish. About 84 percent (128 Mgal/d) was withdrawn from surface water, and 16 percent (24 Mgal/d) was withdrawn from groundwater. Power generation (87 Mgal/d) accounted for 58 percent of the total water withdrawn. Withdrawals for other uses included public supply (22 Mgal/d), industrial (24 Mgal/d), and irrigation (18 Mgal/d). This fact sheet summarizes basic information on the water resources of Ouachita Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports.

Water resources of Webster Parish

USGS Publications Warehouse

Prakken, Lawrence B.; Griffith, Jason M.

2011-01-01

In 2005, about 9.52 million gallons per day (Mgal/d) of water were withdrawn in Webster Parish, Louisiana (fig. 1), including about 9.33 Mgal/d from groundwater sources and 0.19 Mgal/d from surface-water sources1 (table 1). Publicsupply use accounted for about 70 percent of the total water withdrawn. Other categories of use included industrial, rural domestic, livestock, general irrigation, and aquaculture (table 2). Water-use data collected at 5-year intervals from 1960 to 2005 indicate water withdrawals in Webster Parish decreased substantially from 1970 to 1980; surface-water withdrawals for industrial use decreased from about 37 to 0 Mgal/d because of a paper mill closure in 1979. From 1980 to 2000, total water withdrawals in the parish ranged from 7 to 8 Mgal/d (fig. 2). This fact sheet summarizes basic information on the water resources of Webster Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

A new efficient method for synaptic vesicle quantification reveals differences between medial prefrontal cortex perforated and nonperforated synapses.

PubMed

Nava, Nicoletta; Chen, Fenghua; Wegener, Gregers; Popoli, Maurizio; Nyengaard, Jens Randel

2014-02-01

Communication between neurons is mediated by the release of neurotransmitter-containing vesicles from presynaptic terminals. Quantitative characterization of synaptic vesicles can be highly valuable for understanding mechanisms underlying synaptic function and plasticity. We performed a quantitative ultrastructural analysis of cortical excitatory synapses by mean of a new, efficient method, as an alternative to three-dimensional (3D) reconstruction. Based on a hierarchical sampling strategy and unequivocal identification of the region of interest, serial sections from excitatory synapses of medial prefrontal cortex (mPFC) of six Sprague-Dawley rats were acquired with a transmission electron microscope. Unbiased estimates of total 3D volume of synaptic terminals were obtained through the Cavalieri estimator, and adequate correction factors for vesicle profile number estimation were applied for final vesicle quantification. Our analysis was based on 79 excitatory synapses, nonperforated (NPSs) and perforated (PSs) subtypes. We found that total number of docked and reserve-pool vesicles in PSs significantly exceeded that in NPSs (by, respectively, 77% and 78%). These differences were found to be related to changes in size between the two subtypes (active zone area by 86%; bouton volume by 105%) rather than to postsynaptic density shape. Positive significant correlations were found between number of docked and reserve-pool vesicles, active zone area and docked vesicles, and bouton volume and reserve pool vesicles. Our method confirmed the large size of mPFC PSs and a linear correlation between presynaptic features of typical hippocampal synapses. Moreover, a greater number of docked vesicles in PSs may promote a high synaptic strength of these synapses. Copyright © 2013 Wiley Periodicals, Inc.

Variation by Age in Parish Involvement Scores of Catholic Church Attenders in Australia, New Zealand and the United States: Age Effect or Generational Effect?

ERIC Educational Resources Information Center

Dixon, Robert

2006-01-01

This article examines levels of involvement of weekly church attenders in Catholic parishes in Australia, New Zealand and the United States through an analysis of data from the International Congregational Life Survey. Factor analysis was used to identify four questionnaire items related to parish involvement which were then combined to produce a…

Assessment of Historic Landscape, Highway 45 Borrow Pit, Jefferson Parish, Louisiana

DTIC Science & Technology

2003-10-01

Resources Survey of the Mississippi River -Gulf Outlet, Orleans and St. Bernard Parishes , Louisiana . Submitted to the New Orleans District, U.S. Army...US Army Corps of Engineers New Orleans District ASSESSMENT OF HISTORIC LANDSCAPE, HIGHWAY 45 BORROW PIT, JEFFERSON PARISH , LOUISIANA Final Report...LaFourche and Belle Pass forming the western boundary, and the Mississippi River and Red Pass forming the eastern boundary. It encompasses approximately

KSC-97PC1352

NASA Image and Video Library

1997-09-09

STS-86 crew members get a ride in, and learn to operate, an M-113 armored personnel carrier as part of training exercises during the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. George Hoggard, in back at left, a training officer with KSC Fire Services, provides this part of the training to Mission Specialists Wendy B. Lawrence, to the right of Hoggard; Vladimir Georgievich Titov of the Russian Space Agency; and Scott E. Parazynski. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the docking, Titov and Parazynski are scheduled to conduct a spacewalk primarily to retrieve four suitcase-sized environmental payloads from the exterior of the Mir docking module. Also during the mission, STS-86 Mission Specialist David A. Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25 from Launch Pad 39A

Identification of the quinolinedione inhibitor binding site in Cdc25 phosphatase B through docking and molecular dynamics simulations.

PubMed

Ge, Yushu; van der Kamp, Marc; Malaisree, Maturos; Liu, Dan; Liu, Yi; Mulholland, Adrian J

2017-11-01

Cdc25 phosphatase B, a potential target for cancer therapy, is inhibited by a series of quinones. The binding site and mode of quinone inhibitors to Cdc25B remains unclear, whereas this information is important for structure-based drug design. We investigated the potential binding site of NSC663284 [DA3003-1 or 6-chloro-7-(2-morpholin-4-yl-ethylamino)-quinoline-5, 8-dione] through docking and molecular dynamics simulations. Of the two main binding sites suggested by docking, the molecular dynamics simulations only support one site for stable binding of the inhibitor. Binding sites in and near the Cdc25B catalytic site that have been suggested previously do not lead to stable binding in 50 ns molecular dynamics (MD) simulations. In contrast, a shallow pocket between the C-terminal helix and the catalytic site provides a favourable binding site that shows high stability. Two similar binding modes featuring protein-inhibitor interactions involving Tyr428, Arg482, Thr547 and Ser549 are identified by clustering analysis of all stable MD trajectories. The relatively flexible C-terminal region of Cdc25B contributes to inhibitor binding. The binding mode of NSC663284, identified through MD simulation, likely prevents the binding of protein substrates to Cdc25B. The present results provide useful information for the design of quinone inhibitors and their mechanism of inhibition.

Identification of the quinolinedione inhibitor binding site in Cdc25 phosphatase B through docking and molecular dynamics simulations

NASA Astrophysics Data System (ADS)

Ge, Yushu; van der Kamp, Marc; Malaisree, Maturos; Liu, Dan; Liu, Yi; Mulholland, Adrian J.

2017-11-01

Cdc25 phosphatase B, a potential target for cancer therapy, is inhibited by a series of quinones. The binding site and mode of quinone inhibitors to Cdc25B remains unclear, whereas this information is important for structure-based drug design. We investigated the potential binding site of NSC663284 [DA3003-1 or 6-chloro-7-(2-morpholin-4-yl-ethylamino)-quinoline-5, 8-dione] through docking and molecular dynamics simulations. Of the two main binding sites suggested by docking, the molecular dynamics simulations only support one site for stable binding of the inhibitor. Binding sites in and near the Cdc25B catalytic site that have been suggested previously do not lead to stable binding in 50 ns molecular dynamics (MD) simulations. In contrast, a shallow pocket between the C-terminal helix and the catalytic site provides a favourable binding site that shows high stability. Two similar binding modes featuring protein-inhibitor interactions involving Tyr428, Arg482, Thr547 and Ser549 are identified by clustering analysis of all stable MD trajectories. The relatively flexible C-terminal region of Cdc25B contributes to inhibitor binding. The binding mode of NSC663284, identified through MD simulation, likely prevents the binding of protein substrates to Cdc25B. The present results provide useful information for the design of quinone inhibitors and their mechanism of inhibition.

75 FR 49017 - America's Marine Highway Grant Notice of Funding Availability

Federal Register 2010, 2011, 2012, 2013, 2014

2010-08-12

... provide public benefit by transporting passengers and/or freight (container or wheeled) in support of all... infrastructure (wharves, docks, terminals, paving, etc.), --Cargo, passenger and/or vessel handling equipment... and keeping track of entities receiving Federal funds. The identifier is used for tracking purposes...

Why are most EU pigs tail docked? Economic and ethical analysis of four pig housing and management scenarios in the light of EU legislation and animal welfare outcomes.

PubMed

D'Eath, R B; Niemi, J K; Vosough Ahmadi, B; Rutherford, K M D; Ison, S H; Turner, S P; Anker, H T; Jensen, T; Busch, M E; Jensen, K K; Lawrence, A B; Sandøe, P

2016-04-01

To limit tail biting incidence, most pig producers in Europe tail dock their piglets. This is despite EU Council Directive 2008/120/EC banning routine tail docking and allowing it only as a last resort. The paper aims to understand what it takes to fulfil the intentions of the Directive by examining economic results of four management and housing scenarios, and by discussing their consequences for animal welfare in the light of legal and ethical considerations. The four scenarios compared are: 'Standard Docked', a conventional housing scenario with tail docking meeting the recommendations for Danish production (0.7 m2/pig); 'Standard Undocked', which is the same as 'Standard Docked' but with no tail docking, 'Efficient Undocked' and 'Enhanced Undocked', which have increased solid floor area (0.9 and 1.0 m2/pig, respectively) provision of loose manipulable materials (100 and 200 g/straw per pig per day) and no tail docking. A decision tree model based on data from Danish and Finnish pig production suggests that Standard Docked provides the highest economic gross margin with the least tail biting. Given our assumptions, Enhanced Undocked is the least economic, although Efficient Undocked is better economically and both result in a lower incidence of tail biting than Standard Undocked but higher than Standard Docked. For a pig, being bitten is worse for welfare (repeated pain, risk of infections) than being docked, but to compare welfare consequences at a farm level means considering the number of affected pigs. Because of the high levels of biting in Standard Undocked, it has on average inferior welfare to Standard Docked, whereas the comparison of Standard Docked and Enhanced (or Efficient) Undocked is more difficult. In Enhanced (or Efficient) Undocked, more pigs than in Standard Docked suffer from being tail bitten, whereas all the pigs avoid the acute pain of docking endured by the pigs in Standard Docked. We illustrate and discuss this ethical balance using numbers derived from the above-mentioned data. We discuss our results in the light of the EU Directive and its adoption and enforcement by Member States. Widespread use of tail docking seems to be accepted, mainly because the alternative steps that producers are required to take before resorting to it are not specified in detail. By tail docking, producers are acting in their own best interests. We suggest that for the practice of tail docking to be terminated in a way that benefits animal welfare, changes in the way pigs are housed and managed may first be required.

Cultural Resources Survey of Three Iberville Parish Levee Enlargement and Revetment Construction Items

DTIC Science & Technology

1993-09-22

SURVEY OF THREE IBERVILLE PARISH LEVEE ENLARGEMENT AND REVETMENT CONSTRUCTION ITEMS September 1993 Sam .4 D2 FINAL REPORT E R. Christopher Goodwin...LEVEE ENLARGEMENT ANj REVETMENT CONSTRUCTION ITEMS 12. PERSONAL AUTHOR(S) R. Christopher Goodwin, Ph.d., Rebecca E. Bruce, Lawrence L Hewitt, and E... block number) FIELD GROUP SUB-GROUP Acadian Coast Historic Arche6cogy Rice Antebellum Iberville Parish Saw Mill Plantation Carville Leprosarium Ophelia

Parish nursing: a unique resource for community and district nurses.

PubMed

Wordsworth, Helen; Moore, Ros; Woodhouse, Daphne

2016-02-01

This paper examines the effect of parish nursing as a faith community initiative to support the work of district and community nurses and improve health outcomes. It discusses the reasons why faith communities might embark upon health initiatives, and describes the practice of parish nursing and its history and development in the UK. With reference to both quantitative and qualitative outcomes, the relevance of the practice in the UK health scene is assessed. The paper suggests that connecting with the third sector through parish nursing could enhance the work of community and district nurses; this would present additional sources of holistic care and health promotion and can be offered in an optional but complementary manner to the care provided through the NHS.

Import of honeybee prepromelittin into the endoplasmic reticulum: structural basis for independence of SRP and docking protein.

PubMed Central

Müller, G; Zimmermann, R

1987-01-01

Honeybee prepromelittin is correctly processed and imported by dog pancreas microsomes. Insertion of prepromelittin into microsomal membranes, as assayed by signal sequence removal, does not depend on signal recognition particle (SRP) and docking protein. We addressed the question as to how prepromelittin bypasses the SRP/docking protein system. Hybrid proteins between prepromelittin, or carboxy-terminally truncated derivatives, and the cytoplasmic protein dihydrofolate reductase from mouse were constructed. These hybrid proteins were analysed for membrane insertion and sequestration into microsomes. The results suggest the following: (i) The signal sequence of prepromelittin is capable of interacting with the SRP/docking protein system, but this interaction is not mandatory for membrane insertion; this is related to the small size of prepromelittin. (ii) In prepromelittin a cluster of negatively charged amino acids must be balanced by a cluster of positively charged amino acids in order to allow membrane insertion. (iii) In general, a signal sequence can be sufficient to mediate membrane insertion independently of SRP and docking protein in the case of short precursor proteins; however, the presence and distribution of charged amino acids within the mature part of these precursors can play distinct roles. Images Fig. 3. Fig. 4. Fig. 5. Fig. 6. Fig. 7. Fig. 8. Fig. 9. PMID:2820722

KSC-97pc720

NASA Image and Video Library

1997-04-28

STS-84 Mission Specialist C. Michael Foale, who will become the fifth U.S. astronaut to live and work on the Russian Space Station Mir, arrives at KSC’s Shuttle Landing Facility for the STS-84 Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. Foale will be dropped off on Mir when the Space Shuttle Atlantis docks with Mir next month. He will become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth on Atlantis after about four months on the orbiting station. STS-84 will be the sixth Shuttle-Mir docking. Liftoff is targeted for May 15

Characterizing the load environment of ferry landings for Washington State ferries and the Alaska Marine Highway System.

DOT National Transportation Integrated Search

2013-05-01

Anybody riding a ferry wants it to dock safely and for port managers, having passengers and : goods in the water is never a good thing. This project aims to mitigate uncertainty and : assumptions about load demands on ferry terminal structures, s...

Characterizing the load environment of ferry landings for Washington State ferries and the Alaska Marine Highway System.

DOT National Transportation Integrated Search

2012-05-01

Anybody riding a ferry wants it to dock safely and for port managers, having passengers and goods in the water is never a good thing. This project aims to mitigate : uncertainty and assumptions about load demands on ferry terminal structures, spe...

Gemini rendezvous docking simulator

NASA Image and Video Library

1963-11-04

Multiple exposure of Gemini rendezvous docking simulator. Francis B. Smith wrote in his paper "Simulators for Manned Space Research," "The rendezvous and docking operation of the Gemini spacecraft with the Agena and of the Apollo Command Module with the Lunar Excursion Module have been the subject of simulator studies for several years. [This figure] illustrates the Gemini-Agena rendezvous docking simulator at Langley. The Gemini spacecraft was supported in a gimbal system by an overhead crane and gantry arrangement which provided 6 degrees of freedom - roll, pitch, yaw, and translation in any direction - all controllable by the astronaut in the spacecraft. Here again the controls fed into a computer which in turn provided an input to the servos driving the spacecraft so that it responded to control motions in a manner which accurately simulated the Gemini spacecraft." A.W. Vogeley further described the simulator in his paper "Discussion of Existing and Planned Simulators For Space Research," "Docking operations are considered to start when the pilot first can discern vehicle target size and aspect and terminate, of course, when soft contact is made. ... This facility enables simulation of the docking operation from a distance of 200 feet to actual contact with the target. A full-scale mock-up of the target vehicle is suspended near one end of the track. ... On [the Agena target] we have mounted the actual Agena docking mechanism and also various types of visual aids. We have been able to devise visual aids which have made it possible to accomplish nighttime docking with as much success as daytime docking." -- Published in Barton C. Hacker and James M. Grimwood, On the Shoulders of Titans: A History of Project Gemini, NASA SP-4203; Francis B. Smith, "Simulators for Manned Space Research," Paper presented at the 1966 IEEE International convention, March 21-25, 1966; A.W. Vogeley, "Discussion of Existing and Planned Simulators For Space Research," Paper presented at the Conference on the Role of Simulation in Space Technology, August 17-21, 1964.

Connecting congregations: technology resources influence parish nurse practice.

PubMed

Zerull, Lisa M; Near, Kelly K; Ragon, Bart; Farrell, Sarah P

2009-01-01

This descriptive pilot study evaluated the influence of health resource information education and the use of Web-based communication technology on the professional practice of the parish nurse in the congregational setting. Five parish nurse participants from varied denominations in rural and nonrural Virginia received a laptop computer, printer, video projector, and webcam along with high-speed Internet access in each congregational setting. The nurses attended two group education sessions that incorporated computer applications and training in accessing and using quality health information resources and communication applications such as a group "chat" software and webcam to communicate with others through high-speed Internet access. Qualitative analysis from semistructured interviews of nurses confirmed that participants found the project to be beneficial in terms of awareness, education, and applicability of technology use in parish nurse practice. Quantitative data from preproject and postproject surveys found significant differences in nurses' abilities and confidence with technology use and application. Findings showed that the knowledge and experience gained from this study enhanced parish nurse practice and confidence in using technology for communication, health education, and counseling.

Water resources of Concordia Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.

2017-02-24

IntroductionInformation concerning the availability, use, and quality of water in Concordia Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System are the primary sources of the information presented here.In 2010, over 50 million gallons per day (Mgal/d) of water were withdrawn in Concordia Parish, including about 28.7 Mgal/d from groundwater sources and 22.3 Mgal/d from surface-water sources. Withdrawals for agricultural use, composed of livestock, rice irrigation, general irrigation, and aquaculture accounted for about 77 percent (39.2 Mgal/d) of the total water withdrawn. Other categories of use included public supply, power generation, and rural domestic. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that water withdrawals peaked in 2010.

Storeria occipitomaculata obscura (Florida red-bellied snake)

USGS Publications Warehouse

Muse, Lindy J.; Glorioso, Brad M.; Eaglestone, Chandler A. R.

2016-01-01

USA: LOUISIANA: Vermilion Parish: Palmetto Island State Park (29.86335°N, 92.14848°W; WGS 84). 19 February 2016. Lindy J. Muse. Verified by Jeff Boundy. Florida Museum of Natural History (UF 177730, photo voucher). New parish record (Dundee and Rossman 1989. The Amphibians and Reptiles of Louisiana. Louisiana State University Press, Baton Rouge, Louisiana. 300 pp.). Storeria occipitomaculata obscura has not been documented in any of the coastal parishes of Louisiana (Boundy. 2006. Snakes of Louisiana. Louisiana Department of Wildlife & Fisheries, Baton Rouge, Louisiana. 40 pp.). However, this species can be difficult to find in southern Louisiana and other populations in coastal parishes may eventually be discovered. This adult individual (SVL = 292 mm; TL = 70 mm) was found under a log in a wet bottomland forest dominated by Dwarf Palmetto and Bald Cypress.

Water resources of Claiborne Parish, Louisiana

USGS Publications Warehouse

Fendick, Robert B.; Prakken, Lawrence B.; Griffith, Jason M.

2013-01-01

This fact sheet summarizes basic information on the water resources of Claiborne Parish. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Cited References section. In 2010, about 2.60 million gallons per day (Mgal/d) of water were withdrawn in Claiborne Parish, Louisiana, including about 2.42 Mgal/d from groundwater sources and 0.18 Mgal/d from surface-water sources. Public-supply use accounted for about 84 percent of the total water withdrawn. Other categories of use included industrial, rural domestic, livestock, and general irrigation. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that total water withdrawals in the parish have ranged from about 2.6 to 3.9 Mgal/d.

Overview of particulate exposures in the US trucking industry.

PubMed

Smith, Thomas J; Davis, Mary E; Reaser, Paul; Natkin, Jonathan; Hart, Jaime E; Laden, Francine; Heff, Allan; Garshick, Eric

2006-07-01

As part of a large epidemiologic study of lung cancer, 55,000 subjects, we have conducted a nation-wide survey of particulate exposures in the US trucking industry. The goal is to differentiate the risks from various types of particulate exposures, such as traffic emissions and general air pollution. We hypothesize that exposures defined by job and work site characteristics can be linked with subjects using their personal job histories. This report covers exposures at 36 randomly chosen large truck freight terminals in the US. Measurements were made of PM2.5, elemental carbon (EC), and organic carbon (OC) upwind of the terminal (background) and in work areas, and by personal samples. Significant differences in exposure intensity, microg m(-3), were found for work locations and jobs relative to background levels (GM[GSD]) at terminal sites: PM2.5 9.8[2.34], EC 0.5[3.24], and OC 5.0[1.76]. Using EC as a marker for diesel particles, work locations varied significantly: office 0.3[3.7], dock area 0.7[2.89] and shop area 1.5[3.52]), as did job titles (non-smokers): clerk 0.1[9.98], dock worker 0.8[2.13], and mechanic 2.0[3.82]. Cigarette smoking contributed substantially to personal exposures, approximately doubling PM2.5 and OC, but having less of an effect on EC. Large differences were seen across the terminal sites due to differences in local regional air pollution levels from traffic and other sources. We conclude that it will be possible to estimate current exposures of the cohort using an exposure assignment matrix based on job title, work location, and terminal site. This distribution overlaps substantially with the general public's exposure to these sources.

Ground-water resources of southern Tangipahoa Parish and adjacent areas, Louisiana

USGS Publications Warehouse

Rapp, T.R.

1994-01-01

Groundwater resources in southern Tangipahoa Parish and adjacent areas were studied to determine their potential for development as an alternative to the Mississippi River as a water-supply source for Jefferson Parish. Eight major aquifers consisting of thick sand units that underlie the study area are, in descending order: (1) shallow, (2) upper Ponchatoula, (3) lower Ponchatoula, (4) Abita, (5) Covington, (6) Tchefuncta, (7) Hammond, and (8) Amite. A fault zone, referred to as the Baton Rouge fault, crosses southern Tangipahoa Parish. Analyses of geophysical logs indicated that the deep aquifers south of the fault zone had been displaced from 350 to 400 feet, and that the deeper aquifers were not in hydraulic connection with the flow system north of the fault. The groundwater resources of southeastern Louisiana are immense and the quality of groundwater in Tangipahoa Parish is suitable for most uses. The quality of water in these aquifers generally meets the U.S. Environmental Protection Agency's standards for public supply. The hydrologic system underlying Tangipahoa Parish and adjacent areas in 1990 supplied about 19 Mgal/d of water that was suitable for public supply. However, substantial increases in pumping from the aquifer system would result in renewed water-level declines throughout the hydrologic system until a new equilibrium is established. A test we11 in southern Tangipahoa Parish, penetrated all eight aquifers. Total thickness of freshwater sand beds penetrated by the 3003-ft test hole was more than 1900 ft. Resistivity values from an electric log of the test typically averaged 200 ohm-meters, which indicates that the water has low dissolved-solids and chloride concentrations. An analysis of the Abita aquifer at Ruddock in St. John the Baptist Parish, for two of three hypothetical well fields, indicated that for a hypothetical we11 field with a pumping rate of 112 Mgal/d, the freshwater/saltwater interface could arrive at the outer perimeter we11 in 10 to 14 years. The 1990 location of the interface in the Abita aquifer is 1.9 mi from the southernmost part of the potential location of the 112 Mgal/d well field.

Machine Vision for Relative Spacecraft Navigation During Approach to Docking

NASA Technical Reports Server (NTRS)

Chien, Chiun-Hong; Baker, Kenneth

2011-01-01

This paper describes a machine vision system for relative spacecraft navigation during the terminal phase of approach to docking that: 1) matches high contrast image features of the target vehicle, as seen by a camera that is bore-sighted to the docking adapter on the chase vehicle, to the corresponding features in a 3d model of the docking adapter on the target vehicle and 2) is robust to on-orbit lighting. An implementation is provided for the case of the Space Shuttle Orbiter docking to the International Space Station (ISS) with quantitative test results using a full scale, medium fidelity mock-up of the ISS docking adapter mounted on a 6-DOF motion platform at the NASA Marshall Spaceflight Center Flight Robotics Laboratory and qualitative test results using recorded video from the Orbiter Docking System Camera (ODSC) during multiple orbiter to ISS docking missions. The Natural Feature Image Registration (NFIR) system consists of two modules: 1) Tracking which tracks the target object from image to image and estimates the position and orientation (pose) of the docking camera relative to the target object and 2) Acquisition which recognizes the target object if it is in the docking camera Field-of-View and provides an approximate pose that is used to initialize tracking. Detected image edges are matched to the 3d model edges whose predicted location, based on the pose estimate and its first time derivative from the previous frame, is closest to the detected edge1 . Mismatches are eliminated using a rigid motion constraint. The remaining 2d image to 3d model matches are used to make a least squares estimate of the change in relative pose from the previous image to the current image. The changes in position and in attitude are used as data for two Kalman filters whose outputs are smoothed estimate of position and velocity plus attitude and attitude rate that are then used to predict the location of the 3d model features in the next image.

77 FR 26968 - Final Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2012-05-08

.... Unincorporated Areas of Madison Parish Maps are available for inspection at the Madison Parish Police Jury, 100... Jury, 100 North Cedar Street, Tallulah, LA 71282. Village of Richmond Maps are available for inspection...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hite, Roger

The project site is located in Livingston Parish, Louisiana, approximately 26 miles due east of Baton Rouge. This project proposed to evaluate an early Eocene-aged Wilcox oil reservoir for permanent storage of CO 2. Blackhorse Energy, LLC planned to conduct a parallel CO 2 oil recovery project in the First Wilcox Sand. The primary focus of this project was to examine and prove the suitability of South Louisiana geologic formations for large-scale geologic sequestration of CO 2 in association with enhanced oil recovery applications. This was to be accomplished through the focused demonstration of small-scale, permanent storage of CO 2more » in the First Wilcox Sand. The project was terminated at the request of Blackhorse Energy LLC on October 22, 2014.« less

Co-Conserved MAPK Features Couple D-Domain Docking Groove to Distal Allosteric Sites via the C-Terminal Flanking Tail

PubMed Central

Nguyen, Tuan; Ruan, Zheng; Oruganty, Krishnadev; Kannan, Natarajan

2015-01-01

Mitogen activated protein kinases (MAPKs) form a closely related family of kinases that control critical pathways associated with cell growth and survival. Although MAPKs have been extensively characterized at the biochemical, cellular, and structural level, an integrated evolutionary understanding of how MAPKs differ from other closely related protein kinases is currently lacking. Here, we perform statistical sequence comparisons of MAPKs and related protein kinases to identify sequence and structural features associated with MAPK functional divergence. We show, for the first time, that virtually all MAPK-distinguishing sequence features, including an unappreciated short insert segment in the β4-β5 loop, physically couple distal functional sites in the kinase domain to the D-domain peptide docking groove via the C-terminal flanking tail (C-tail). The coupling mediated by MAPK-specific residues confers an allosteric regulatory mechanism unique to MAPKs. In particular, the regulatory αC-helix conformation is controlled by a MAPK-conserved salt bridge interaction between an arginine in the αC-helix and an acidic residue in the C-tail. The salt-bridge interaction is modulated in unique ways in individual sub-families to achieve regulatory specificity. Our study is consistent with a model in which the C-tail co-evolved with the D-domain docking site to allosterically control MAPK activity. Our study provides testable mechanistic hypotheses for biochemical characterization of MAPK-conserved residues and new avenues for the design of allosteric MAPK inhibitors. PMID:25799139

Structural Analysis of the Bacterial Proteasome Activator Bpa in Complex with the 20S Proteasome.

PubMed

Bolten, Marcel; Delley, Cyrille L; Leibundgut, Marc; Boehringer, Daniel; Ban, Nenad; Weber-Ban, Eilika

2016-12-06

Mycobacterium tuberculosis harbors proteasomes that recruit substrates for degradation through an ubiquitin-like modification pathway. Recently, a non-ATPase activator termed Bpa (bacterial proteasome activator) was shown to support an alternate proteasomal degradation pathway. Here, we present the cryo-electron microscopy (cryo-EM) structure of Bpa in complex with the 20S core particle (CP). For docking into the cryo-EM density, we solved the X-ray structure of Bpa, showing that it forms tight four-helix bundles arranged into a 12-membered ring with a 40 Å wide central pore and the C-terminal helix of each protomer protruding from the ring. The Bpa model was fitted into the cryo-EM map of the Bpa-CP complex, revealing its architecture and striking symmetry mismatch. The Bpa-CP interface was resolved to 3.5 Å, showing the interactions between the C-terminal GQYL motif of Bpa and the proteasome α-rings. This docking mode is related to the one observed for eukaryotic activators with features specific to the bacterial complex. Copyright © 2016 Elsevier Ltd. All rights reserved.

Snapin mediates insulin secretory granule docking, but not trans-SNARE complex formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Somanath, Sangeeta; Partridge, Christopher J.; Marshall, Catriona

Secretory granule exocytosis is a tightly regulated process requiring granule targeting, tethering, priming, and membrane fusion. At the heart of this process is the SNARE complex, which drives fusion through a coiled-coil zippering effect mediated by the granule v-SNARE protein, VAMP2, and the plasma membrane t-SNAREs, SNAP-25 and syntaxin-1A. Here we demonstrate that in pancreatic β-cells the SNAP-25 accessory protein, snapin, C-terminal H2 domain binds SNAP-25 through its N-terminal Sn-1 domain. Interestingly whilst snapin binds SNAP-25, there is only modest binding of this complex with syntaxin-1A under resting conditions. Instead synataxin-1A appears to be recruited in response to secretory stimulation.more » These results indicate that snapin plays a role in tethering insulin granules to the plasma membrane through coiled coil interaction of snapin with SNAP-25, with full granule fusion competency only resulting after subsequent syntaxin-1A recruitment triggered by secretory stimulation. - Highlights: • Snapin mediates granule docking. • Snapin binds SNAP-25. • SNARE complex forms downstream.« less

STS-86 crew members Wolf, Chretien and Titov in M-113

NASA Technical Reports Server (NTRS)

1997-01-01

STS-86 crew members get a ride in, and learn to operate, an M-113 armored personnel carrier as part of training exercises during the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. George Hoggard, in back at left, a training officer with KSC Fire Services, provides this part of the training to Mission Specialists Wendy B. Lawrence, to the right of Hoggard; Vladimir Georgievich Titov of the Russian Space Agency; and Scott E. Parazynski. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the docking, Titov and Parazynski are scheduled to conduct a spacewalk primarily to retrieve four suitcase-sized environmental payloads from the exterior of the Mir docking module. Also during the mission, STS-86 Mission Specialist David A. Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25 from Launch Pad 39A.

STS-89 M.S. Andrew Thomas, Ph.D., participates in TCDT

NASA Technical Reports Server (NTRS)

1998-01-01

STS-89 Mission Specialist Andrew Thomas, Ph.D., participates in a question and answer session for the media as part of Terminal Countdown Demonstration Test (TCDT) activities. The TCDT is held at KSC prior to each Space Shuttle flight to provide crews with an opportunity to participate in simulated countdown activities. The STS-89 mission will be the eighth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Dr. Thomas will transfer to the space station, succeeding David Wolf, M.D., who will return to Earth aboard Endeavour. Dr. Thomas will live and work on Mir until June. STS-89 is scheduled for a Jan. 22 liftoff at 9:48 p.m.

Water resources of Assumption Parish, Louisiana

USGS Publications Warehouse

Prakken, Lawrence B.; Lovelace, John K.

2013-01-01

Information concerning the availability, use, and quality of water in Assumption Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for management of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System (http://waterdata.usgs.gov/nwis) are the primary sources of the information presented here. In 2010, about 21.4 million gallons per day (Mgal/d) of water were withdrawn in Assumption Parish, including about 12.4 Mgal/d from surface-water sources and 9.03 Mgal/d from groundwater sources. Withdrawals for industrial use accounted for about 16.4 Mgal/d or 76 percent of the total water withdrawn. Other categories of use included public supply, rural domestic, livestock, general irrigation, and aquaculture.Water-use data collected at 5-year intervals from 1960 to 2010 indicated that water withdrawals peaked in 2000 at about 29.7 Mgal/d.

Water resources of Catahoula Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.

2017-02-24

IntroductionInformation concerning the availability, use, and quality of water in Catahoula Parish, Louisiana, is critical for proper water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, parish residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater and surface-water sources in the parish is presented. Previously published reports and data stored in the U.S. Geological Survey’s National Water Information System are the primary sources of the information presented here.In 2010, 30.01 million gallons per day (Mgal/d) of water were withdrawn in Catahoula Parish, Louisiana, including about 22.63 Mgal/d from groundwater sources and 7.38 Mgal/d from surface-water sources. Withdrawals for agricultural use, composed of aquaculture, general irrigation, livestock, and rice irrigation, accounted for about 93 percent (28.05 Mgal/d) of the total water withdrawn. Other categories of use included public supply and rural domestic. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that water withdrawals peaked in 2000 at 30.99 Mgal/d.

3. Photocopy of photograph (location of original unknown) Mary Mather, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

3. Photocopy of photograph (location of original unknown) Mary Mather, photographer, ca. 1920 PARTIAL EAST ELEVATION, OBSCURED BY FOLIAGE - Bagatelle Plantation, East River Road (moved to Iberville Parish), Donaldsonville, Ascension Parish, LA

Dimerization of the docking/adaptor protein HEF1 via a carboxy-terminal helix-loop-helix domain.

PubMed

Law, S F; Zhang, Y Z; Fashena, S J; Toby, G; Estojak, J; Golemis, E A

1999-10-10

HEF1, p130(Cas), and Efs define a family of multidomain docking proteins which plays a central coordinating role for tyrosine-kinase-based signaling related to cell adhesion. HEF1 function has been specifically implicated in signaling pathways important for cell adhesion and differentiation in lymphoid and epithelial cells. While the SH3 domains and SH2-binding site domains (substrate domains) of HEF1 family proteins are well characterized and binding partners known, to date the highly conserved carboxy-terminal domains of the three proteins have lacked functional definition. In this study, we have determined that the carboxy-terminal domain of HEF1 contains a divergent helix-loop-helix (HLH) motif. This motif mediates HEF1 homodimerization and HEF1 heterodimerization with a recognition specificity similar to that of the transcriptional regulatory HLH proteins Id2, E12, and E47. We had previously demonstrated that the HEF1 carboxy-terminus expressed as a separate domain in yeast reprograms cell division patterns, inducing constitutive pseudohyphal growth. Here we show that pseudohyphal induction by HEF1 requires an intact HLH, further supporting the idea that this motif has an effector activity for HEF1, and implying that HEF1 pseudohyphal activity derives in part from interactions with yeast helix-loop-helix proteins. These combined results provide initial insight into the mode of function of the HEF1 carboxy-terminal domain and suggest that the HEF1 protein may interact with cellular proteins which control differentiation. Copyright 1999 Academic Press.

Archeological and Palynological Analysis of Specimens and Materials Recovered in Two Historic Period Privies and a Well in Saint Alice Revetment, Saint James Parish, Louisiana.

DTIC Science & Technology

1982-01-01

Mississippi River in St. James Parish , Louisiana . This revetment lies on the right descending bank of the Mississippi River about 50 miles downstream from... river . It is not surprising, therefore, that the soils of the parish and the St. Alice Revetment study area within it are all, ultimately, alluvial in...History. In Cultural Resources Survey of Ten Project Areas on the Red River , Louisiana , by D. Bruck Dickson. New World Research Report of Investigations

Elucidation of the Hsp90 C-terminal Inhibitor Binding Site

PubMed Central

Matts, Robert L.; Dixit, Anshuman; Peterson, Laura B.; Sun, Liang; Voruganti, Sudhakar; Kalyanaraman, Palgunan; Hartson, Steve D.; Verkhivker, Gennady M.; Blagg, Brian S. J.

2011-01-01

The Hsp90 chaperone machine is required for the folding, activation and/or stabilization of more than 50 proteins directly related to malignant progression. Hsp90 contains small molecule binding sites at both its N- and C-terminal domains, however, limited structural and biochemical data regarding the C-terminal binding site is available. In this report, the small molecule binding site in the Hsp90 C-terminal domain was revealed by protease fingerprinting and photoaffinity labeling utilizing LC-MS/MS. The identified site was characterized by generation of a homology model for hHsp90α using the SAXS open structure of HtpG and docking the bioactive conformation of NB into the generated model. The resulting model for the bioactive conformation of NB bound to Hsp90α is presented herein. PMID:21548602

Computational and Biochemical Discovery of RSK2 as a Novel Target for Epigallocatechin Gallate (EGCG).

PubMed

Chen, Hanyong; Yao, Ke; Chang, Xiaoyu; Shim, Jung-Hyun; Kim, Hong-Gyum; Malakhova, Margarita; Kim, Dong-Joon; Bode, Ann M; Dong, Zigang

2015-01-01

The most active anticancer component in green tea is epigallocatechin-3-gallate (EGCG). Protein interaction with EGCG is a critical step for mediating the effects of EGCG on the regulation of various key molecules involved in signal transduction. By using computational docking screening methods for protein identification, we identified a serine/threonine kinase, 90-kDa ribosomal S6 kinase (RSK2), as a novel molecular target of EGCG. RSK2 includes two kinase catalytic domains in the N-terminal (NTD) and the C-terminal (CTD) and RSK2 full activation requires phosphorylation of both terminals. The computer prediction was confirmed by an in vitro kinase assay in which EGCG inhibited RSK2 activity in a dose-dependent manner. Pull-down assay results showed that EGCG could bind with RSK2 at both kinase catalytic domains in vitro and ex vivo. Furthermore, results of an ATP competition assay and a computer-docking model showed that EGCG binds with RSK2 in an ATP-dependent manner. In RSK2+/+ and RSK2-/- murine embryonic fibroblasts, EGCG decreased viability only in the presence of RSK2. EGCG also suppressed epidermal growth factor-induced neoplastic cell transformation by inhibiting phosphorylation of histone H3 at Ser10. Overall, these results indicate that RSK2 is a novel molecular target of EGCG.

Assessing SaTScan ability to detect space-time clusters in wildfires

NASA Astrophysics Data System (ADS)

Costa, Ricardo; Pereira, Mário; Caramelo, Liliana; Vega Orozco, Carmen; Kanevski, Mikhail

2013-04-01

Besides classical cluster analysis techniques which are able to analyse spatial and temporal data, SaTScan software analyses space-time data using the spatial, temporal or space-time scan statistics. This software requires the spatial coordinates of the fire, but since in the Rural Fire Portuguese Database (PRFD) (Pereira et al, 2011) the location of each fire is the parish where the ignition occurs, the fire spatial coordinates were considered as coordinates of the centroid of the parishes. Moreover, in general, the northern region is characterized by a large number of small parishes while the southern comprises parish much larger. The objectives of this study are: (i) to test the ability of SaTScan to detect the correct space-time clusters, in what respects to spatial and temporal location and size; and, (ii) to evaluate the effect of the dimensions of the parishes and of aggregating all fires occurred in a parish in a single point. Results obtained with a synthetic database where clusters were artificially created with different densities, in different regions of the country and with different sizes and durations, allow to conclude: the ability of SaTScan to correctly identify the clusters (location, shape and spatial and temporal dimension); and objectively assess the influence of the size of the parishes and windows used in space-time detection. Pereira, M. G., Malamud, B. D., Trigo, R. M., and Alves, P. I.: The history and characteristics of the 1980-2005 Portuguese rural fire database, Nat. Hazards Earth Syst. Sci., 11, 3343-3358, doi:10.5194/nhess-11-3343-2011, 2011 This work is supported by European Union Funds (FEDER/COMPETE - Operational Competitiveness Programme) and by national funds (FCT - Portuguese Foundation for Science and Technology) under the project FCOMP-01-0124-FEDER-022692, the project FLAIR (PTDC/AAC-AMB/104702/2008) and the EU 7th Framework Program through FUME (contract number 243888).

Water resources of St. Tammany Parish, Louisiana

USGS Publications Warehouse

Griffith, Jason M.

2009-01-01

This fact sheet summarizes basic information on the water resources of St. Tammany Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the references section.

5 CFR 532.219 - Criteria for establishing nonappropriated fund wage areas.

Code of Federal Regulations, 2011 CFR

2011-01-01

... area is composed of the counties, parishes, cities, or townships in which survey data are collected. (2) Nonsurvey area: Nonsurvey counties, parishes, or townships may be combined with the survey area to form the...

Religious Beliefs and Cancer Screening Behaviors among Catholic Latinos: Implications for Faith-based Interventions

PubMed Central

Allen, Jennifer D.; Leyva, Bryan; Torres, María Idalí; Ospino, Hosffman; Tom, Laura; Rustan, Sarah; Bartholomew, Amanda

2014-01-01

Although most U.S. Latinos identify as Catholic, few studies have focused on the influence of this religious tradition on health beliefs among this population. This study explores the role of Catholic religious teachings, practices, and ministry on cancer screening knowledge, attitudes and behaviors among Latinos. Eight focus groups were conducted with 67 Catholic Latino parishioners in Massachusetts. Qualitative analysis provided evidence of strong reliance on faith, God, and parish leaders for health concerns. Parishes were described as vital sources of health and social support, playing a central role in the community's health. Participants emphasized that their religious beliefs promote positive health behaviors and health care utilization, including the use of cancer screening services. In addition, they expressed willingness to participate in cancer education programs located at their parishes and provided practical recommendations for implementing health programs in parishes. Implications for culturally appropriate health communication and faith-based interventions are discussed. PMID:24858865

Engaging diversity's underbelly: a story from an immigrant parish community.

PubMed

Borg, Mark B

2006-06-01

: This story explores an intervention conducted in a Catholic parish community in New York City. The intervention, conducted by the author and a Jesuit priest, focused on issues of unity and diversity among the various Chinese immigrant subgroups in the parish (primarily Cantonese- and Mandarin-speakers). Issues of class, power, and a history of colonialism in the Catholic Church are explored as central to the relations among culturally diverse Chinese American community members and between the members and the practitioners and the church authority. The author especially focuses on how the dynamics that played out in the intervention reflected wider issues of economics, labor practices, and political elitism in the wider Chinatown community. A central part of the author's argument is about power relationships between this parish community and Chinatown and how these power relationships are embedded within broader racial and economic oppression within the United States.

Water resources of Allen Parish

USGS Publications Warehouse

Prakken, Lawrence B.; Griffith, Jason M.; Fendick, Robert B.

2012-01-01

In 2005, approximately 29.2 million gallons per day (Mgal/d) of water were withdrawn in Allen Parish, Louisiana, including about 26.8 Mgal/d from groundwater sources and 2.45 Mgal/d from surface-water sources. Rice irrigation accounted for 74 percent (21.7 Mgal/d) of the total water withdrawn. Other categories of use included public supply, industrial, rural domestic, livestock, general irrigation, and aquaculture. Water-use data collected at 5-year intervals from 1960 to 2005 indicate water withdrawals in the parish were greatest in 1960 (119 Mgal/d) and 1980 (98.7 Mgal/d). The substantial decrease in surface-water use between 1960 and 1965 is primarily attributable to rice-irrigation withdrawals declining from 61.2 to 6.74 Mgal/d. This fact sheet summarizes information on the water resources of Allen Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

KSC-97PC1353

NASA Image and Video Library

1997-09-09

STS-86 crew members get a ride in, and learn to operate, an M-113 armored personnel carrier as part of training exercises during the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. George Hoggard, in back at left, a training officer with KSC Fire Services, provides this part of the training to Mission Specialists David A. Wolf, to the right of Hoggard; Jean-Loup J.M. Chretien of the French Space Agency; and Vladimir Georgievich Titov, in foreground, of the Russian Space Agency. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the docking, Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25 from Launch Pad 39A

Evaluation of GPS position and attitude determination for automated rendezvous and docking missions. M.S. Thesis

NASA Technical Reports Server (NTRS)

Diprinzio, Marc D.; Tolson, Robert H.

1994-01-01

The use of the Global Positioning System for position and attitude determination is evaluated for an automated rendezvous and docking mission. The typical mission scenario involves the chaser docking with the target for resupply or repair purposes, and is divided into three sections. During the homing phase, the chaser utilizes coarse acquisition pseudorange data to approach the target; guidance laws for this stage are investigated. In the second phase, differential carrier phase positioning is utilized. The chaser must maintain a quasiconstant distance from the target, in order to resolve the initial integer ambiguities. Once the ambiguities are determined, the terminal phase is entered, and the rendezvous is completed with continuous carrier phase tracking. Attitude knowledge is maintained in all phases through the use of the carrier phase observable. A Kalman filter is utilized to estimate all states from the noisy measurement data. The effects of selective availability and cycle slips are also investigated.

Understanding of empty container movement: A study on a bottleneck at an off-dock depot

NASA Astrophysics Data System (ADS)

Zain, Rosmaizura Mohd; Rahman, Mohd Nizam Ab; Nopiah, Zulkifli Mohd; Saibani, Nizaroyani

2014-09-01

Port not only function as connections between marine and land transportation but also as core business areas. In a port terminal, available space is limited, but the influx of container is growing. The off-dock depot is one of the key supply chain players that hold empty containers in the inventory. Therefore, this paper aims to identify the main factors of bottlenecks or congestion that hinder the rapid movement of empty containers from the off-dock depot to the customers. Thirty interviews were conducted with individuals who are key players in the container supply chain. The data were analyzed using Atlas.ti software and the analytic hierarchy process to rank the priority factors of bottlenecks. Findings show that several pertinent factors act as barriers to the key players in the container movement in the day-to-day operations. In future studies, strategies to overcome fragmentation in the container supply chain and logistics must be determined.

STS-86 crew members Lawrence, Titov and Parazynski in M-113

NASA Technical Reports Server (NTRS)

1997-01-01

STS-86 crew members get a ride in, and learn to operate, an M-113 armored personnel carrier as part of training exercises during the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. George Hoggard, in back at left, a training officer with KSC Fire Services, provides this part of the training to Mission Specialists David A. Wolf, to the right of Hoggard; Jean-Loup J.M. Chretien of the French Space Agency; and Vladimir Georgievich Titov, in foreground, of the Russian Space Agency. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the docking, Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25 from Launch Pad 39A.

STS-86 crew members (Parazynski, Wolf, Lawrence) in slidewire basket

NASA Technical Reports Server (NTRS)

1997-01-01

STS-86 Mission Specialists Scott E. Parazynski, at left, David A. Wolf, and Wendy B. Lawrence, at right, participate in emergency egress training at Launch Pad 39A as part of Terminal Countdown Demonstration Test (TCDT) activities. They are the three U.S. astronauts who will serve as mission specialists during the planned 10-day flight to the Russian Space Station Mir. Also serving as mission specialists will be Vladimir Georgievich Titov of the Russian Space Agency and Jean-Loup J.M. Chretien of the French Space Agency, CNES. STS-86 will be the seventh docking of the Space Shuttle with the Mir. During the docking, Wolf will transfer to the orbiting Russian station and become a member of the Mir 24 crew, replacing U.S. astronaut C. Michael Foale, who has been on the Mir since the last docking mission, STS-84, in May. Launch of Mission STS-86 aboard the Space Shuttle Atlantis is targeted for Sept. 25.

Cell adhesion controlled by adhesion G protein-coupled receptor GPR124/ADGRA2 is mediated by a protein complex comprising intersectins and Elmo-Dock.

PubMed

Hernández-Vásquez, Magda Nohemí; Adame-García, Sendi Rafael; Hamoud, Noumeira; Chidiac, Rony; Reyes-Cruz, Guadalupe; Gratton, Jean Philippe; Côté, Jean-François; Vázquez-Prado, José

2017-07-21

Developmental angiogenesis and the maintenance of the blood-brain barrier involve endothelial cell adhesion, which is linked to cytoskeletal dynamics. GPR124 (also known as TEM5/ADGRA2) is an adhesion G protein-coupled receptor family member that plays a pivotal role in brain angiogenesis and in ensuring a tight blood-brain barrier. However, the signaling properties of GPR124 remain poorly defined. Here, we show that ectopic expression of GPR124 promotes cell adhesion, additive to extracellular matrix-dependent effect, coupled with filopodia and lamellipodia formation and an enrichment of a pool of the G protein-coupled receptor at actin-rich cellular protrusions containing VASP, a filopodial marker. Accordingly, GPR124-expressing cells also displayed increased activation of both Rac and Cdc42 GTPases. Mechanistically, we uncover novel direct interactions between endogenous GPR124 and the Rho guanine nucleotide exchange factors Elmo/Dock and intersectin (ITSN). Small fragments of either Elmo or ITSN1 that bind GPR124 blocked GPR124-induced cell adhesion. In addition, Gβγ interacts with the C-terminal tail of GPR124 and promotes the formation of a GPR124-Elmo complex. Furthermore, GPR124 also promotes the activation of the Elmo-Dock complex, as measured by Elmo phosphorylation on a conserved C-terminal tyrosine residue. Interestingly, Elmo and ITSN1 also interact with each other independently of their GPR124-recognition regions. Moreover, endogenous phospho-Elmo and ITSN1 co-localize with GPR124 at lamellipodia of adhering endothelial cells, where GPR124 expression contributes to polarity acquisition during wound healing. Collectively, our results indicate that GPR124 promotes cell adhesion via Elmo-Dock and ITSN. This constitutes a previously unrecognized complex formed of atypical and conventional Rho guanine nucleotide exchange factors for Rac and Cdc42 that is putatively involved in GPR124-dependent angiogenic responses. © 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Relaxation of Summer Gasoline Volatility Standard for Several Parishes in Louisiana

EPA Pesticide Factsheets

EPA issued a proposed rule to relax the federal volatility (RVP) standard applicable to gasoline supplied to the 11 Louisiana parishes from 7.8 pounds per square inch (psi) to 9.0 psi during the summer ozone season.

2. Photocopy of photograph (location of original unknown) Mary Mather, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

2. Photocopy of photograph (location of original unknown) Mary Mather, photographer, ca. 1920 GENERAL VIEW OF WEST (LEFT) AND SOUTH (RIGHT) FACADES, TAKEN FROM LEVEE - Bagatelle Plantation, East River Road (moved to Iberville Parish), Donaldsonville, Ascension Parish, LA

Depositional analysis of Hill sand of Rodessa Formation (lower Cretaceous) in north Shongaloo-Red Rock field, Webster Parish, Louisiana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adamick, J.A.; Sartin, A.A.

1988-09-01

Hill sand is an informal subdivision of the Lower Cretaceous Rodessa Formation and is a common hydrocarbon reservoir in northeastern Texas, northern Louisiana, and southern Arkansas. The Hill sand is lithologically variable within the study area and consists of conglomerate, fine-grained sandstone, siltstone, mottled red-green claystone, black shale, and limestone. Five depositional environments were interpreted for lithofacies present in Hill sand cores from the North Shongaloo-Red Rock field. These include facies A, fluvial point bar; facies B, crevasse system; facies C, interdistributary bay; facies D, swamp; and facies E, carbonate interdistributary bay. Fluvial point bar and crevasse deposits commonly formmore » hydrocarbon reservoirs in the field. On a regional scale, depositional environments observed in the Hill sand include several fluvial deposystems trending northeast-southwest through Webster Parish. These deposystems terminate into deltaic distributary mouth bars along a northwest-southeast-trending coastline. Areas west of the coastline were occupied by shallow marine environments. Interchannel areas east of the coastline were occupied by interdistributary bay, lake, and crevasse environments in lower deltaic areas, and by lake, swamp, and crevasse environments in upper deltaic areas. Lowermost deposits of the Hill sand throughout the region are interpreted to consist of shallow marine environments. These marine deposits were overlain by thick, predominantly nonmarine sediments. Near the end of Hill sand deposition, the entire region was covered by very shallow marine environments, prior to deposition of the overlying First Lower Anhydrite Stringer.« less

STS-89 M.S. Bonnie Dunbar, Ph.D., participates in TCDT

NASA Technical Reports Server (NTRS)

1998-01-01

STS-89 Mission Specialist Bonnie Dunbar, Ph.D., prepares to drive an M-113 armored personnel carrier as part of Terminal Countdown Demonstration Test (TCDT) activities. The TCDT is held at KSC prior to each Space Shuttle flight to provide crews with an opportunity to participate in simulated countdown activities. The STS-89 mission will be the eighth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Mission Specialist Andrew Thomas, Ph.D., will transfer to the space station, succeeding David Wolf, M.D., who will return to Earth aboard Endeavour. Dr. Thomas will live and work on Mir until June. STS-89 is scheduled for a Jan. 22 liftoff at 9:48 p.m.

Mites associated with southern pine bark beetles in Allen Parish, Louisiana

Treesearch

John C. Moser; Lawrence M. Roton

1971-01-01

Ninety-six species of mites were associated with the southern pine beetle and allied scolytids in an outbreak area in Allen Parish, La. the complex was evaluated to ascertain which species may be of value as biological control agents.

Mites associated with Southern Pine Bark Beetles in Allen Parish, Louisiana

Treesearch

John C. Moser; Lawrence M. Roton

1971-01-01

Ninety-six species of mites were associated with the southern pine beetle and allied scolytides in an outbreak area in Allen Parish, LA. The complex was evaluated to ascertain which species may be of value as biological control agents.

Bayou Corne sinkhole : control measurements of State Highway 70 in Assumption Parish, Louisiana.

DOT National Transportation Integrated Search

2014-01-01

This project measured and assessed the surface stability of the portion of LA Highway 70 that is : potentially vulnerable to the Assumption Parish sinkhole. Using Global Positioning Systems (GPS) : enhanced by a real-time network (RTN) of continuousl...

Sharing the Light of Faith.

ERIC Educational Resources Information Center

Anderson, Hazel

1999-01-01

Presents the parish programs at the Prince of Peace Catholic Community in Plano, Texas and at the Holy Family Parish Community in Inverness, Illinois as examples of what can be accomplished when imaginative, inspired, and knowledgeable teachers take on family catechesis as their mission. (VWC)

Direct Final Rule Approving Relaxation of Summer Gasoline Volatility Standard for Grant Parish Area

EPA Pesticide Factsheets

EPA is taking direct final action to relax the federal volatility (RVP) standard applicable to summer gasoline supplied to the Grand Parish, Louisiana area from 7.8 pounds per square inch (psi) to 9.0 psi.

Molecular Recognition of PPARγ by Kinase Cdk5/p25: Insights from a Combination of Protein-Protein Docking and Adaptive Biasing Force Simulations.

PubMed

Mottin, Melina; Souza, Paulo C T; Skaf, Munir S

2015-07-02

The peroxisome proliferator-activated receptor γ (PPARγ) is an important transcription factor that plays a major role in the regulation of glucose and lipid metabolisms and has, therefore, many implications in modern-life metabolic disorders such as diabetes, obesity, and cardiovascular diseases. Phosphorylation of PPARγ by the cyclin-dependent kinase 5 (Cdk5) has been recently proved to promote obesity and loss of insulin sensitivity. The inhibition of this reaction is currently being pursued to develop PPARγ ligands for type 2 diabetes treatments. The knowledge of the protein-protein interactions between Cdk5/p25 and PPARγ can be an important asset for better understanding of the molecular basis of the Cdk5-meditated phosphorylation of PPARγ and its inhibition. By means of a computational approach that combines protein-protein docking and adaptive biasing force molecular dynamics simulations, we obtained PPARγ-Cdk5/p25 structural models that are consistent with the mechanism of the enzymatic reaction and with overall structural features of the full length PPARγ-RXRα heterodimer bound to DNA. In addition to the active site, our model shows that the interacting regions between the two proteins should involve two distal docking sites, comprising the PPARγ Ω-loop and Cdk5 N-terminal lobe and the PPARγ β-sheet and Cdk5 C-terminal lobe. These sites are related to PPARγ transactivation and directly interact with PPARγ ligands. Our results suggest that β-sheets and Ω-loop stabilization promoted by PPARγ agonists could be important to inhibit Cdk5-mediated phosphorylation.

77 FR 51744 - Proposed Flood Elevation Determinations

Federal Register 2010, 2011, 2012, 2013, 2014

2012-08-27

..., FEMA published in the Federal Register a proposed rule that included an erroneous flooding source name for the Town of Livonia in Pointe Coupee Parish, Louisiana. The flooding source name of Bayou Fordoche... Coupee Parish, Louisiana, and Incorporated Areas'' addressed several flooding sources, including Bayou...

Direct Final Rule Approving Relaxation of Summer Gasoline Volatility Standard for Grant Parish Area Additional Resources

EPA Pesticide Factsheets

Federal Registers and fact sheets on EPA approving the State of Louisiana's request to relax the federal Reid Vapor Pressure standard applicable to gasoline introduced into commerce in Grant Parish, Louisiana during the summer ozone control season.

Bayou Corne Sinkhole: Control Measurements of State Highway 70 in Assumption Parish, Louisiana : Research Project Capsule

DOT National Transportation Integrated Search

2012-09-01

The sinkhole located in northern Assumption Parish, Louisiana, threatens : the stability of Highway 70, a state-maintained route. In order to monitor : and mitigate potential damage eff ects on this infrastructure, the Louisiana : Department of Trans...

Bayou Corne sinkhole : control measurements of State Highway 70 in Assumption Parish, Louisiana, tech summary.

DOT National Transportation Integrated Search

2014-01-01

The sinkhole located in Assumption Parish, Louisiana, threatens the stability of Highway 70, a state maintained route. In order to : mitigate the potential damaging e ects of the sinkhole on this infrastructure, the Louisiana Department of Transpo...

Trypanosoma brucei gambiense trypanosomiasis in Terego county, northern Uganda, 1996: a lot quality assurance sampling survey.

PubMed

Hutin, Yvan J F; Legros, Dominique; Owini, Vincent; Brown, Vincent; Lee, Evan; Mbulamberi, Dawson; Paquet, Christophe

2004-04-01

We estimated the pre-intervention prevalence of Trypanosoma brucei gambiense (Tbg) trypanosomiasis using the lot quality assurance sampling (LQAS) methods in 14 parishes of Terego County in northern Uganda. A total of 826 participants were included in the survey sample in 1996. The prevalence of laboratory confirmed Tbg trypanosomiasis adjusted for parish population sizes was 2.2% (95% confidence interval =1.1-3.2). This estimate was consistent with the 1.1% period prevalence calculated on the basis of cases identified through passive and active screening in 1996-1999. Ranking of parishes in four categories according to LQAS analysis of the 1996 survey predicted the prevalences observed during the first round of active screening in the population in 1997-1998 (P < 0.0001, by chi-square test). Overall prevalence and ranking of parishes obtained with LQAS were validated by the results of the population screening, suggesting that these survey methods may be useful in the pre-intervention phase of sleeping sickness control programs.

Water Resources of Beauregard Parish

USGS Publications Warehouse

Prakken, Lawrence B.; Griffith, Jason M.; Fendick, Robert B.

2012-01-01

In 2005, about 30.6 million gallons per day (Mgal/d) of water was withdrawn in Beauregard Parish, Louisiana, including about 30.4 Mgal/d from groundwater sources and 0.1 Mgal/d from surface water sources. Industrial use, primarily for wood products, accounted for about 72 percent (22.0 Mgal/d) of the total water withdrawn. Other categories of use included public supply, rural domestic, livestock, rice irrigation, general irrigation, and aquaculture. Water-use data collected at 5-year intervals from 1960 to 2005 indicate water withdrawals in the parish peaked at about 43.5 Mgal/d in 1985. The large increase in groundwater usage from 1970 to 1975 was primarily due to industrial withdrawals, which increased from 3.64 Mgl/d in 1970 to 29.0 Mgal/d in 1975. This fact sheet summarizes information on the water resources of Beauregard Parish, La. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

Water resources of St. Bernard Parish, Louisiana

USGS Publications Warehouse

Prakken, Larry B.

2013-01-01

In 2010, about 261 million gallons per day (Mgal/d) of water were withdrawn in St. Bernard Parish, Louisiana, almost entirely from surface-water sources. Industrial use accounted for about 97 percent (253 Mgal/d) of the total water withdrawn. Other categories of use included public supply, rural domestic, and livestock. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that total water withdrawals in the parish ranged from about 138 to 720 Mgal/d, with industrial use of surface water making up the bulk of water withdrawals. The large decline in surface-water withdrawals from 1980 to 1985 was largely attributable to a decrease in industrial use from 654 Mgal/d in 1980 to 127 Mgal/d in 1985. This fact sheet summarizes basic information on the water resources of St. Bernard Parish. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

Water resources of Plaquemines Parish, Louisiana

USGS Publications Warehouse

Prakken, Larry B.

2013-01-01

In 2010, about 85.1 million gallons per day (Mgal/d) of water were withdrawn in Plaquemines Parish, Louisiana. Surface-water sources accounted for almost all withdrawals; groundwater sources accounted for only 0.04 Mgal/d. Industrial use accounted for about 92 percent of the total water withdrawn. Other categories of use included public supply, rural domestic, and livestock. Water-use data collected at 5-year intervals from 1960 to 2010 indicated that water withdrawals in Plaquemines Parish peaked at about 177 Mgal/d in 1975. The peak resulted primarily from an increase in industrial surface-water withdrawals from about 23.8 Mgal/d in 1970 to 171 Mgal/d in 1975. Since 1975, water withdrawals have ranged from about 157 to 85.1 Mgal/d, with industrial surface-water withdrawals accounting for most of the variation. This fact sheet summarizes basic information on the water resources of Plaquemines Parish. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

Enhancing organizational capacity to provide cancer control programs among Latino churches: design and baseline findings of the CRUZA Study.

PubMed

Allen, Jennifer D; Torres, Maria Idali; Tom, Laura S; Rustan, Sarah; Leyva, Bryan; Negron, Rosalyn; Linnan, Laura A; Jandorf, Lina; Ospino, Hosffman

2015-04-09

Faith-based organizations (FBOs) have been successful in delivering health promotion programs for African Americans, though few studies have been conducted among Latinos. Even fewer have focused on organizational change, which is required to sustain community-based initiatives. We hypothesized that FBOs serving Latinos would be more likely to offer evidence-based strategies (EBS) for cancer control after receiving a capacity enhancement intervention to implement health programs, and designed the CRUZA trial to test this hypothesis. This paper describes the CRUZA design and baseline findings. We identified Catholic parishes in Massachusetts that provided Spanish-language mass (n = 65). A baseline survey assessed organizational characteristics relevant to adoption of health programs, including readiness for adoption, "fit" between innovation and organizational mission, implementation climate, and organizational culture. In the next study phase, parishes that completed the baseline assessment will be recruited to a randomized cluster trial, with the parish as the unit of analysis. Both groups will receive a Program Manual and Toolkit. Capacity Enhancement parishes will also be offered technical support, assistance forming health committees and building inter-institutional partnerships, and skills-based training. Of the 49 parishes surveyed at baseline (75%), one-third (33%) reported having provided at least one health program in the prior year. However, only two program offerings were cancer-specific. Nearly one-fifth (18%) had an active health ministry. There was a high level of organizational readiness to adopt cancer control programs, high congruence between parish missions and CRUZA objectives, moderately conducive implementation climates, and organizational cultures supportive of CRUZA programming. Having an existing health ministry was significantly associated with having offered health programs within the past year. Relationships between health program offerings and other organizational characteristics were not statistically significant. Findings suggest that many parishes do not offer cancer control programs, yet many may be ready to do so. However, the perceptions about existing organizational practices and policies may not be conducive to program initiation. A capacity enhancement intervention may hold promise as a means of increasing health programming. The efficacy of such an intervention will be tested in phase two of this study.

Structure and regulatory role of the C-terminal winged helix domain of the archaeal minichromosome maintenance complex

PubMed Central

Wiedemann, Christoph; Szambowska, Anna; Häfner, Sabine; Ohlenschläger, Oliver; Gührs, Karl-Heinz; Görlach, Matthias

2015-01-01

The minichromosome maintenance complex (MCM) represents the replicative DNA helicase both in eukaryotes and archaea. Here, we describe the solution structure of the C-terminal domains of the archaeal MCMs of Sulfolobus solfataricus (Sso) and Methanothermobacter thermautotrophicus (Mth). Those domains consist of a structurally conserved truncated winged helix (WH) domain lacking the two typical ‘wings’ of canonical WH domains. A less conserved N-terminal extension links this WH module to the MCM AAA+ domain forming the ATPase center. In the Sso MCM this linker contains a short α-helical element. Using Sso MCM mutants, including chimeric constructs containing Mth C-terminal domain elements, we show that the ATPase and helicase activity of the Sso MCM is significantly modulated by the short α-helical linker element and by N-terminal residues of the first α-helix of the truncated WH module. Finally, based on our structural and functional data, we present a docking-derived model of the Sso MCM, which implies an allosteric control of the ATPase center by the C-terminal domain. PMID:25712103

Synthesis and optimization of thiadiazole derivatives as a novel class of substrate competitive c-Jun N-terminal kinase inhibitors

PubMed Central

De, Surya K.; Chen, Vida; Stebbins, John L.; Chen, Li-Hsing; Cellitti, Jason F.; Machleidt, Thomas; Barile, Elisa; Riel-Mehan, Megan; Dahl, Russell; Yang, Li; Emdadi, Aras; Murphy, Ria; Pellecchia, Maurizio

2009-01-01

A series of thiadiazole derivatives has been designed as potential allosteric, substrate competitive inhibitors of the protein kinase JNK. We report on the synthesis, characterization and evaluation of a series of compounds that resulted in the identification of potent and selective JNK inhibitors targeting its JIP-1 docking site. PMID:20045647

Molecular docking and inhibition kinetics of α-glucosidase activity by labdane diterpenes isolated from tora seeds (Alpinia nigra B.L. Burtt.).

PubMed

Ghosh, Sudipta; Rangan, Latha

2015-02-01

Current approach against type 2 diabetes involves α-glucosidase inhibitors like acarbose associated with many side effects. Therefore, as an alternative to the existing drug, many natural products mainly from plant sources have been investigated which inhibit α-glucosidase. Here, we have selected medicinally important Alpinia nigra to explore its α-glucosidase inhibitory activity. Organic extracts of seeds and two purified natural diterpenes I: (E)-labda-8(17), 12-diene-15, 16-dial and II: (E)-8β, 17-epoxylabd-12-ene-15, 16-dial from A. nigra were investigated towards inhibition of α-glucosidase activity. Dose-dependent inhibition pattern were observed for seed extracts and both the compounds. Further, inhibition kinetics studies of the diterpenes indicated a non-competitive type of inhibition against α-glucosidase. Docking studies were carried out which revealed that both the diterpenes interacted within the active site of N-terminal and C-terminal domain of human maltase-glucoamylase enzyme, respectively. This is the first report of α-glucosidase inhibitory activity of these isolated diterpenes and their higher inhibitory potential than any terpenoids studied till date against α-glucosidase.

Independent signaling by Drosophila insulin receptor for axon guidance and growth.

PubMed

Li, Caroline R; Guo, Dongyu; Pick, Leslie

2013-01-01

The Drosophila insulin receptor (DInR) regulates a diverse array of biological processes including growth, axon guidance, and sugar homeostasis. Growth regulation by DInR is mediated by Chico, the Drosophila homolog of vertebrate insulin receptor substrate proteins IRS1-4. In contrast, DInR regulation of photoreceptor axon guidance in the developing visual system is mediated by the SH2-SH3 domain adaptor protein Dreadlocks (Dock). In vitro studies by others identified five NPXY motifs, one in the juxtamembrane region and four in the signaling C-terminal tail (C-tail), important for interaction with Chico. Here we used yeast two-hybrid assays to identify regions in the DInR C-tail that interact with Dock. These Dock binding sites were in separate portions of the C-tail from the previously identified Chico binding sites. To test whether these sites are required for growth or axon guidance in whole animals, a panel of DInR proteins, in which the putative Chico and Dock interaction sites had been mutated individually or in combination, were tested for their ability to rescue viability, growth and axon guidance defects of dinr mutant flies. Sites required for viability were identified. Unexpectedly, mutation of both putative Dock binding sites, either individually or in combination, did not lead to defects in photoreceptor axon guidance. Thus, either sites also required for viability are necessary for DInR function in axon guidance and/or there is redundancy built into the DInR/Dock interaction such that Dock is able to interact with multiple regions of DInR. We also found that simultaneous mutation of all five NPXY motifs implicated in Chico interaction drastically decreased growth in both male and female adult flies. These animals resembled chico mutants, supporting the notion that DInR interacts directly with Chico in vivo to control body size. Mutation of these five NPXY motifs did not affect photoreceptor axon guidance, segregating the roles of DInR in the processes of growth and axon guidance.

Leadership Development Experiences of Exemplary Roman Catholic Parish Priests: An Exploratory Study

ERIC Educational Resources Information Center

Ong, Rosemarie A.

2013-01-01

This qualitative, phenomenological study addressed the research question: How do exemplary Roman Catholic parish priests perceive and describe their leadership development experience? The study explored experiences considered important in developing leadership, including how they occurred, the meaning provided, the definition of exemplary…

75 FR 16163 - Announcement of Funding Awards for the HUD-Veterans Affairs Supportive Housing (HUD-VASH) Program...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-03-31

... Alexandria Housing Authority P.O. Box 8219 Alexandria LA 71306 166,349 35 Bossier Parish Police Jury 3022 Old... Authority 1013 31st Street......... Kenner LA 70065 316,704 35 Bossier Parish Police Jury 3022 Old Minden...

Parish Character.

ERIC Educational Resources Information Center

Duggan, Robert D.

1999-01-01

Discusses the role of the Catholic parish in forming the character of its youth, asserting that vibrant communities of faith can form Catholic character and values that will survive any threat from society. Presents a formula for success in this endeavor, which includes: (1) good liturgy; (2) democratic leadership; (3) lifelong religious education…

Calcasieu Parish Spark Program for Primary Gifted/Talented Students: Guidelines and Curriculum. Revised.

ERIC Educational Resources Information Center

Bankens, Barbara; Hillebrandt, Marlene

Presented is the curriculum guide for primary grade gifted and talented students in Calcasieu Parish, Louisiana. Introductory information includes information on program philosophy, rationale, definition of giftedness, goals of the program, identifying characteristics of giftedness, identification and placement, rationale for curriculum…

DRE Directions: Determining Fair Compensation for Parish Catechetical Leaders.

ERIC Educational Resources Information Center

Almon, Sister Marianne

2001-01-01

Reports that those who work as professional directors of religious education and coordinators of religious education have often been compensated with a volunteers stipend only. States that the National Association of Parish Catechetical Directors met to share information on what can be done to better compensate these leaders. (CJW)

A School Desegregation Plan for East Baton Rouge Parish.

ERIC Educational Resources Information Center

Rossell, Christine H.

This paper outlines an alternative desegregation plan that would replace the one implemented in the East Baton Rouge Parish (Louisiana) School District in 1981. Known as the Incentives Desegregation Plan, the alternative plan was designed to produce interracial contact comparable to the earlier plan, without incurring the attendant costs of…

Problem Identification Survey Handbook for Parish Rural Development Committees.

ERIC Educational Resources Information Center

Koch, Kenneth A.

The Task Force on Resource Development of the Cooperative Extension Service, Louisiana State University, decided to utilize the leader identification technique as a means of assisting the parish rural development committees in the rural development process. The technique is a procedure to stimulate effective citizen participation to identify…

Stabilization techniques for reactive aggregate in soil-cement base course.

DOT National Transportation Integrated Search

2003-01-01

Anhydrite (CaSO4) beds occur as a cap rock on a salt dome in Winn Parish in north Louisiana. Locally known as Winn Rock, it has been quarried for gravel for road building. It has been used as a surface course for local parish and logging roads. Stabi...

75 FR 78601 - Drawbridge Operation Regulation; Gulf Intracoastal Waterway, New Orleans Harbor, Inner Harbor...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-12-16

... Operation Regulation; Gulf Intracoastal Waterway, New Orleans Harbor, Inner Harbor Navigation Canal, New Orleans, Orleans Parish, LA AGENCY: Coast Guard, DHS. ACTION: Notice of temporary deviation from... Harvey Lock), at New Orleans, Orleans Parish, Louisiana. This deviation is necessary to adjust the...

78 FR 14185 - Drawbridge Operation Regulation; Gulf Intracoastal Waterway, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-05

... Intracoastal Waterway (GIWW), mile 2.8 at New Orleans, Jefferson Parish, Louisiana. The deviation is necessary... across the Harvey Canal Route, Intracoastal Waterway, mile 2.8 at New Orleans, Jefferson Parish... Department of Transportation West Building, 1200 New Jersey Avenue SE., Washington, DC 20590, between 9 a.m...

75 FR 44152 - Suspension of Community Eligibility

Federal Register 2010, 2011, 2012, 2013, 2014

2010-07-28

.... 220167 March 5, 1975, ......do Do. Landry Parish. Emerg; June 25, 1976, Reg; August 5, 2010, Susp. Eunice..., Susp. Sunset, Town of, St. Landry 220176 April 24, 1975, ......do Do. Parish. Emerg; March 30, 1982... 29, 1978, Reg; August 5, 2010, Susp. Oklahoma: Afton, Town of, Ottawa 400155 March 30, 1976, ......do...

Evaluation of the Louisiana Nutrition Education Program.

ERIC Educational Resources Information Center

Jones, J. H., Jr.

In 1969, 385 Louisiana Cooperative Extension Service aides conducted an eight week nutrition education program (expanded to 12 weeks in three parishes) for over 18,000 low income homemakers and children in 31 parishes. Initial interviews were used to ascertain nutrition habits and influences thereon, knowledge levels, homemakers' age and…

Developing a Predictive Metric to Assess School Viability

ERIC Educational Resources Information Center

James, John T.; Tichy, Karen L.; Collins, Alan; Schwob, John

2008-01-01

This article examines a wide range of parish school indicators that can be used to predict long-term viability. The study reported in this article explored the relationship between demographic variables, financial variables, and parish grade school closures in the Archdiocese of Saint Louis. Specifically, this study investigated whether…

Racial Segregation, Economic Growth, and Resilience to Natural Disasters

NASA Astrophysics Data System (ADS)

Fernandez, S.; Li, H.; Ganguly, A.

2008-05-01

Resilience to natural disasters is often defined as the ability of a community to recover from disaster disruption. Thus, resilience depends on various socioeconomic factors which influence the short- and long-term impacts of natural disasters as well as the resources that a community can bring to bear on the recovery process. One objective of this research is to tease out the determinants of resilience from a variety of possible indicators and data sources. A second objective is to test hypotheses which in turn are based on prior reports in the literature: Racial segregation has a negative impact, while economic growth has a positive impact, on resilience. We choose the Biloxi-Gulfport-Pascagoula, MS Metropolitan Area, and New Orleans Metropolitan Area, for our case studies. The study areas included nine counties and parishes that are located in the Hurricane Katrina impact area. The nine counties and parishes were Hancock County, Harrison County, and Jackson County in Mississippi, and Jefferson Parish, Orleans Parish, Plaquemines Parish, St. Bernard Parish, St. Charles Parish, and St. Tammany Parish in Louisiana. The three counties make up the Biloxi-Gulfport-Pascagoula, MS Metropolitan Area, and the six parishes are components of New Orleans Metropolitan Area. The determinants of resilience for this study were based on two considerations. First, we followed the political, military or security, economic, social, informational and infrastructural (PMESII) framework, which succinctly describes the resources available to a community. Second, we were pragmatically constrained by data availability. Five variables were selected as plausible determinants of resilience: (i) return of the original population, (ii) employment recovery, (iii) tax collected, (iv) building permit restoration, and (v) school re-opening information. The five variables were found to be highly correlated. We created three resilience indices, one by simple addition, another by addition of the normalized Z scores, and a third by principal component analysis. The indices were computed by bringing together the relevant PMESII dimensions. The three indices were found to be highly, and negatively, correlated with the social vulnerability index created by Cutter (2001). This is not surprising, since the Cutter indices themselves are created by dimensionality reduction techniques applied on plausible determinants of resilience. Our indices were negatively correlated with racial segregation, which confirmed one hypothesis. They also negatively correlated with economic growth rate. By examining the industrial structures of each county (or parish), we found a negative correlation between economic growth and natural disaster resilience indices reflects the economic constraints of the local governments rather than the recovery capability of the communities. Our findings provide new insights for resilience research. First, we find resilience indices may be developed by combining the relevant PMESII dimensions, even though the predictive power of such indices needs to be tested further. Second, to build a resilient community, a mixed housing policy and a place-based anti-poverty policy are suggested. The results are preliminary and the research needs to be strengthened in three areas. First, we have only examined the social and economic dimensions because of data availability. Data along other dimensions of the PMESII framework need to be collected ad utilized. Second, we collected data only for six county-level communities. Additional case studies can test the robustness of the insights.

HK022 Nun Requires Arginine-Rich Motif Residues Distinct from λ N

PubMed Central

Tawk, Caroline S.; Ghattas, Ingrid R.

2015-01-01

ABSTRACT Bacteriophage λ N protein binds boxB RNA hairpins in the nut (N utilization) sites of immediate early λ transcripts and interacts with host factors to suppress transcriptional termination at downstream terminators. In opposition to λ N, the Nun protein of HK022 binds the boxBs of coinfecting λ transcripts, interacts with a similar or identical set of host factors, and terminates transcription to suppress λ replication. Comparison of N-boxB and Nun-boxB nuclear magnetic resonance (NMR) structural models suggests similar interactions, though limited mutagenesis of Nun is available. Here, libraries of Nun's arginine-rich motif (ARM) were screened for the ability to exclude λ coinfection, and mutants were assayed for Nun termination with a boxB plasmid reporter system. Several Nun ARM residues appear to be immutable: Asp26, Arg28, Arg29, Arg32, Trp33, and Arg36. Asp26 and Trp33 appear to be unable to contact boxB and are not found at equivalent positions in λ N ARM. To understand if the requirement of Asp26, Trp33, and Arg36 indicated differences between HK022 Nun termination and λ N antitermination complexes, the same Nun libraries were fused to the activation domain of λ N and screened for clones able to complement N-deficient λ. Mutants were assayed for N antitermination. Surprisingly, Asp26 and Trp33 were still essential when Nun ARM was fused to N. Docking suggests that Nun ARM contacts a hydrophobic surface of the NusG carboxy-terminal domain containing residues necessary for Nun function. These findings indicate that Nun ARM relies on distinct contacts in its ternary complex and illustrate how protein-RNA recognition can evolve new regulatory functions. IMPORTANCE λ N protein interacts with host factors to allow λ nut-containing transcripts to elongate past termination signals. A competing bacteriophage, HK022, expresses Nun protein, which causes termination of λ nut transcripts. λ N and HK022 Nun use similar arginine-rich motifs (ARMs) to bind the same boxB RNAs in nut transcripts. Screening libraries of Nun ARM mutants, both in HK022 Nun and in a λ N fusion, revealed amino acids essential to Nun that could bind one or more host factors. Docking suggests that NusG, which is present in both Nun termination and N antitermination, is a plausible partner. These findings could help understand how transcription elongation is regulated and illustrate how subtle differences allow ARMs to evolve new regulatory functions. PMID:26350130

HK022 Nun Requires Arginine-Rich Motif Residues Distinct from λ N.

PubMed

Tawk, Caroline S; Ghattas, Ingrid R; Smith, Colin A

2015-11-01

Bacteriophage λ N protein binds boxB RNA hairpins in the nut (N utilization) sites of immediate early λ transcripts and interacts with host factors to suppress transcriptional termination at downstream terminators. In opposition to λ N, the Nun protein of HK022 binds the boxBs of coinfecting λ transcripts, interacts with a similar or identical set of host factors, and terminates transcription to suppress λ replication. Comparison of N-boxB and Nun-boxB nuclear magnetic resonance (NMR) structural models suggests similar interactions, though limited mutagenesis of Nun is available. Here, libraries of Nun's arginine-rich motif (ARM) were screened for the ability to exclude λ coinfection, and mutants were assayed for Nun termination with a boxB plasmid reporter system. Several Nun ARM residues appear to be immutable: Asp26, Arg28, Arg29, Arg32, Trp33, and Arg36. Asp26 and Trp33 appear to be unable to contact boxB and are not found at equivalent positions in λ N ARM. To understand if the requirement of Asp26, Trp33, and Arg36 indicated differences between HK022 Nun termination and λ N antitermination complexes, the same Nun libraries were fused to the activation domain of λ N and screened for clones able to complement N-deficient λ. Mutants were assayed for N antitermination. Surprisingly, Asp26 and Trp33 were still essential when Nun ARM was fused to N. Docking suggests that Nun ARM contacts a hydrophobic surface of the NusG carboxy-terminal domain containing residues necessary for Nun function. These findings indicate that Nun ARM relies on distinct contacts in its ternary complex and illustrate how protein-RNA recognition can evolve new regulatory functions. λ N protein interacts with host factors to allow λ nut-containing transcripts to elongate past termination signals. A competing bacteriophage, HK022, expresses Nun protein, which causes termination of λ nut transcripts. λ N and HK022 Nun use similar arginine-rich motifs (ARMs) to bind the same boxB RNAs in nut transcripts. Screening libraries of Nun ARM mutants, both in HK022 Nun and in a λ N fusion, revealed amino acids essential to Nun that could bind one or more host factors. Docking suggests that NusG, which is present in both Nun termination and N antitermination, is a plausible partner. These findings could help understand how transcription elongation is regulated and illustrate how subtle differences allow ARMs to evolve new regulatory functions. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Forest statistics for Northwest Louisiana Parishes

Treesearch

James F. Rosson; Daniel F. Bertelson

1985-01-01

These tables were derived from data obtained during a 1984 inventory of 13 parishes comprising the Northwest unit of Louisiana (fig. 1). The data on forest acreage and timber volume were secured by a systematic sampling method involving a forest-nonforest classification on aerial photographs and on-the-ground measurements of trees at sample locations. The sample...

Forest statistics for Southwest Louisiana parishes

Treesearch

James F. Rosson; Daniel F. Bertelson

1985-01-01

These tables were derived from data obtained during a 1984 inventory of 11 parishes comprising the Southwest Unit of Louisiana (fig. 1). The data on forest acreage and timber volume were secured by a systematic sampling method involving a forest-nonforest classification on aerial photographs and on-the-ground measurements of trees at sample locations. The sample...

Religious Education and the Law: A Handbook for Parish Catechetical Leaders.

ERIC Educational Resources Information Center

Shaughnessy, Mary Angela

Today more than ever before, lay persons are being asked to share in the catechetical ministry of the Catholic Church by serving as catechetical leaders, catechists, and religious education board members. This handbook is designed to provide catechetical leaders and others involved in parish religious education with essential information about…

Alternative Fuels Data Center: St. Landry Parish Turns Garbage into

Science.gov Websites

Renewable Natural GasA> St. Landry Parish Turns Garbage into Renewable Natural Gas to someone by natural gas to fuel its vehicles. For information about this project, contact Louisiana Clean Fuels - Television's Original Automotive Magazine Provided by Maryland Public Television Related Videos Photo of a car

Determining a "Profile" of "Disconnected" Students.

ERIC Educational Resources Information Center

Parish, Thomas S.; Parish, Joycelyn Gay

An attempt was made to create a profile of students at risk of disconnecting from school or being disconnected. In this study, 1,853 grade school students were evaluated by their teachers on the Potential Dropout Checklist (PDOC) (T. Parish and J. Parish, 1993), an instrument that offers 20 items believed to discern trouble spots or problem…

78 FR 18480 - Drawbridge Operation Regulations; Chef Menteur Pass, at Lake Catherine, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-27

... Operation Regulations; Chef Menteur Pass, at Lake Catherine, LA AGENCY: Coast Guard, DHS. ACTION: Notice of..., mile 2.8, at Lake Catherine, Orleans Parish, Louisiana. The deviation is necessary to ensure the safety.... Highway 90 swing bridge crossing the Chef Menteur Pass, mile 2.8, at Lake Catherine, Orleans, Parish...

District Composite Report: Terrebonne Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Terrebonne Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal…

District Composite Report: Madison Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

In the District Composite Report for Madison Parish, up to six years of data is presented. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data in the District Composite Report enables policy makers to anticipate changes in educational…

Bossier Parish Community College and Delgado Community College Collaborative Pharmacy Technician Program Distance Education Initiative.

ERIC Educational Resources Information Center

Bossier Parish Community Coll., Bossier City, LA.

Two Louisiana community colleges--Bossier Parish Community College (BPCC) and Delgado Community College (DCC)--proposed, developed, and implemented a collaborative Pharmacy Technician program for delivery through the use of two-way interactive video. The new program was inspired by new certification requirements instituted by the state of…

78 FR 3914 - Submission of U.S. Nomination to the World Heritage List

Federal Register 2010, 2011, 2012, 2013, 2014

2013-01-17

... Monumental Earthworks of Poverty Point in West Carroll Parish, Louisiana. This is the third notice required... World Heritage List for ``Monumental Earthworks of Poverty Point'' in West Carroll Parish, Louisiana... Poverty Point are nominated under World Heritage cultural criterion (iii) as provided in 36 CFR 73.9(b...

Vision-based sensing for autonomous in-flight refueling

NASA Astrophysics Data System (ADS)

Scott, D.; Toal, M.; Dale, J.

2007-04-01

A significant capability of unmanned airborne vehicles (UAV's) is that they can operate tirelessly and at maximum efficiency in comparison to their human pilot counterparts. However a major limiting factor preventing ultra-long endurance missions is that they require landing to refuel. Development effort has been directed to allow UAV's to automatically refuel in the air using current refueling systems and procedures. The 'hose & drogue' refueling system was targeted as it is considered the more difficult case. Recent flight trials resulted in the first-ever fully autonomous airborne refueling operation. Development has gone into precision GPS-based navigation sensors to maneuver the aircraft into the station-keeping position and onwards to dock with the refueling drogue. However in the terminal phases of docking, the accuracy of the GPS is operating at its performance limit and also disturbance factors on the flexible hose and basket are not predictable using an open-loop model. Hence there is significant uncertainty on the position of the refueling drogue relative to the aircraft, and is insufficient in practical operation to achieve a successful and safe docking. A solution is to augment the GPS based system with a vision-based sensor component through the terminal phase to visually acquire and track the drogue in 3D space. The higher bandwidth and resolution of camera sensors gives significantly better estimates on the state of the drogue position. Disturbances in the actual drogue position caused by subtle aircraft maneuvers and wind gusting can be visually tracked and compensated for, providing an accurate estimate. This paper discusses the issues involved in visually detecting a refueling drogue, selecting an optimum camera viewpoint, and acquiring and tracking the drogue throughout a widely varying operating range and conditions.

In-Silico Analysis of Binding Site Features and Substrate Selectivity in Plant Flavonoid-3-O Glycosyltransferases (F3GT) through Molecular Modeling, Docking and Dynamics Simulation Studies

PubMed Central

Sharma, Ranu; Panigrahi, Priyabrata; Suresh, C.G.

2014-01-01

Flavonoids are a class of plant secondary metabolites that act as storage molecules, chemical messengers, as well as participate in homeostasis and defense processes. They possess pharmaceutical properties important for cancer treatment such as antioxidant and anti-tumor activities. The drug-related properties of flavonoids can be improved by glycosylation. The enzymes glycosyltransferases (GTs) glycosylate acceptor molecules in a regiospecific manner with the help of nucleotide sugar donor molecules. Several plant GTs have been characterized and their amino acid sequences determined. However, three-dimensional structures of only a few are reported. Here, phylogenetic analysis using amino acid sequences have identified a group of GTs with the same regiospecific activity. The structures of these closely related GTs were modeled using homologous GT structures. Their substrate binding sites were elaborated by docking flavonoid acceptor and UDP-sugar donor molecules in the modeled structures. Eight regions near the acceptor binding site in the N- and C- terminal domain of GTs have been identified that bind and specifically glycosylate the 3-OH group of acceptor flavonoids. Similarly, a conserved motif in the C-terminal domain is known to bind a sugar donor substrate. In certain GTs, the substitution of a specific glutamine by histidine in this domain changes the preference of sugar from glucose to galactose as a result of changed pattern of interactions. The molecular modeling, docking, and molecular dynamics simulation studies have revealed the chemical and topological features of the binding site and thus provided insights into the basis of acceptor and donor recognition by GTs. PMID:24667893

In-silico screening and validation of high-affinity tetra-peptide inhibitor of Leishmania donovani O-acetyl serine sulfhydrylase (OASS).

PubMed

Kant, Vishnu; Vijayakumar, Saravanan; Sahoo, Ganesh Chandra; Chaudhery, Shailendra S; Das, Pradeep

2018-02-07

OASS is a specific enzyme that helps Leishmania parasite to survive the oxidative stress condition in human macrophages. SAT C-terminal peptides in several organisms, including Leishmania, were reported to inhibit or reduce the activity of OASS. Small peptide and small molecules mimicking the SAT C-terminal residues are designed and tested for the inhibition of OASS in different organisms. Hence, in this study, all the possible tetra-peptide combinations were designed and screened based on the docking ability with Leishmania donovani OASS (Ld-OASS). The top ranked peptides were further validated for the stability using 50 ns molecular dynamic simulation. In order to identify the better binding capability of the peptides, the top peptides complexed with Ld-OASS were also subjected to molecular dynamic simulation. The docking and simulation results favored the peptide EWSI to possess greater advantage than previously reported peptide (DWSI) in binding with Ld-OASS active site. Also, screening of non-peptide inhibitor of Asinex Biodesign library based on the shape similarity of EWSI and DWSI was performed. The top similar molecules of each peptides were docked on to Ld-OASS active site and subsequently simulated for 20 ns. The results suggested that the ligand that shares high shape similarity with EWSI possess better binding capability than the ligand that shares high shape similarity with DWSI. This study revealed that the tetra-peptide EWSI had marginal advantage over DWSI in binding with Ld-OASS, thereby providing basis for defining a pharmacophoric scaffold for the design of peptidomimetic inhibitors as well as non-peptide inhibitors of Ld-OASS.

Potential Air Toxics Hot Spots in Truck Terminals and Cabs

PubMed Central

Smith, Thomas J.; Davis, Mary E.; Hart, Jaime E.; Blicharz, Andrew; Laden, Francine; Garshick, Eric

2016-01-01

INTRODUCTION Hot spots are areas where concentrations of one or more air toxics — organic vapors or particulate matter (PM) — are expected to be elevated. The U.S. Environmental Protection Agency’s (EPA*) screening values for air toxics were used in our definition of hot spots. According to the EPA, a screening value “is used to indicate a concentration of a chemical in the air to which a person could be continually exposed for a lifetime … and which would be unlikely to result in a deleterious effect (either cancer or noncancer health effects)” (U.S. EPA 2006). Our characterization of volatile organic compounds (VOCs; namely 18 hydrocarbons, methyl tert-butyl ether [MTBE], acetone, and aldehydes) was added onto our ongoing National Cancer Institute–funded study of lung cancer and particulate pollutant concentrations (PM with an aerodynamic diameter ≤ 2.5 µm [PM2.5], elemental carbon [EC], and organic carbon [OC]) and source apportionment of the U.S. trucking industry. We focused on three possible hot spots within the trucking terminals: upwind background areas affected by nearby industrial parks; downwind areas affected by upwind and terminal sources; and the loading docks and mechanic shops within terminal as well as the interior of cabs of trucks being driven on city, suburban, and rural streets and on highways. METHODS In Phase 1 of our study, 15 truck terminals across the United States were each visited for five consecutive days. During these site visits, sorbent tubes were used to collect 12-hour integrated samples of hydrocarbons and aldehydes from upwind and downwind fence-line locations as well as inside truck cabs. Meteorologic data and extensive site information were collected with each sample. In Phase 2, repeat visits to six terminals were conducted to test the stability of concentrations across time and judge the representativeness of our previous measurements. During the repeat site visits, the sampling procedure was expanded to include real-time sampling for total hydrocarbon (HC) and PM2.5 at the terminal upwind and downwind sites and inside the truck cabs, two additional monitors in the yard for four-quadrant sampling to better characterize the influence of wind, and indoor sampling in the loading dock and mechanic shop work areas. RESULTS Mean and median concentrations of VOCs across the sampling locations in and around the truck terminals showed significant variability in the upwind concentrations as well as in the intensity of exposures for drivers, loading-dock workers, and mechanics. The area of highest concentrations varied, although the lowest concentrations were always found in the upwind background samples. However, the downwind samples, which included the terminal’s contribution, were on average only modestly higher than the upwind samples. In the truck terminal, the mechanic-shop-area concentrations were consistently elevated for many of the VOCs (including the xylenes, alkanes, and acetone) and particulates; the loading-dock concentrations had relatively high concentrations of 1,3-butadiene, formaldehyde, and acetaldehyde; and nonsmoking driver exposures were elevated for benzene, MTBE, styrene, and hexane. Also, the loading dock and yard background concentrations for EC and PM2.5 were highly correlated with many of the VOCs (50% of pairs tested with Spearman r > 0.5 and 75% with r > 0.4); in the mechanic shop VOCs were correlated with EC but not PM2.5 (r = 0.4–0.9 where significant); and for driver exposures VOC correlations with EC and PM2.5 were relatively low, with the exception of a few aromatics, primarily benzene (r = 0.4–0.5). A principal component analysis of background source characteristics across the terminal locations that had repeat site visits identified three different groupings of variables (the “components”). This analysis suggested that a strong primary factor for hydrocarbons (alkanes and aromatics) was the major contributor to VOC variability in the yard upwind measurement. Aldehydes and acetone, which loaded onto the second and third components, were responsible for a smaller contribution to VOC variability. A multi-layer exposure model was constructed using structural equation modeling techniques that significantly predicted the yard upwind concentrations of individual VOCs as a function of wind speed, road proximity, and regional location (R2 = 0.5–0.9). This predicted value for the yard background concentration was then used to calculate concentrations for the loading dock and mechanic shop. Finally, we conducted a detailed descriptive analysis of the real-time data collected in the yard and in truck cabs during the six repeat site visits, which included more than 50 12-hour sessions at each sampling location. The real-time yard monitoring results suggested that under some conditions there was a clear upwind-to-downwind trend indicating a terminal contribution, which was not apparent in the integrated sampling data alone. They also suggested a nonlinear relationship with wind speed: calm conditions (wind speed < 2 mph) were associated with erratic upwind–downwind differences, lower wind speeds (2 to 10 mph) favored transport with little dilution, and higher wind speeds (> 10 mph) favored dilution and dispersal (more so for VOCs than for PM). Finally, an analysis of the real-time data for driver exposures in trucks with a global positioning system (GPS) matched with geographic information system (GIS) data suggested a clear influence of traffic and industrial sources along a given route with peaks in driver exposures. These peaks were largely associated with traffic, major intersections, idling at the terminals, and pickup and delivery (P&D) periods. However, VOCs and PM2.5 had different exposure patterns: VOCs exposures increased when the vehicle was stopped, and PM2.5 exposures increased during travel in traffic. CONCLUSIONS All three types of testing sites—upwind and downwind fence-line locations and inside truck cabs while in heavy traffic — met the established definition for a hot spot by having periods with concentrations of pollutants that exceeded the EPA’s screening values. Most frequently, the pollutants with concentrations exceeding the screening values were formaldehyde, acetaldehyde, and EC (which serves as a marker for diesel particulate); less frequently they were 1,3-butadiene and benzene. In the case of the downwind location of a single truck terminal without an aggregation of other sources, high concentrations of VOCs and PM were infrequent. Using structural equation modeling, a model was developed that could identify combinations of conditions and factors likely to produce hot spots. Source apportionment analyses showed that EC came predominantly from diesel emissions. As expected from the sites studied, organic vapors associated with vehicle emissions (C6–C8 alkanes and aromatics) were the predominant components of VOCs, followed by formaldehyde and acetaldehyde. For driver exposures, high VOC values were associated with stopped vehicles, and high PM2.5 values were associated with conditions during driving. PMID:23409510

Geo-mapping of time trends in childhood caries risk--a method for assessment of preventive care.

PubMed

Strömberg, Ulf; Holmn, Anders; Magnusson, Kerstin; Twetman, Svante

2012-06-11

Dental caries is unevenly distributed within populations with a higher burden in low socio-economy groups. Several attempts have been made to allocate resources to those that need them the most; there is a need for convenient approaches to population-based monitoring of caries risk over time. The aim of this study was to develop the geo-map concept, addressing time trends in caries risk, and demonstrate the novel approach by analyzing epidemiological data from preschool residents in the region of Halland, Sweden. The study population consisted of 9,973 (2006) and 10,927 (2010) children between 3 to 6 years of age (~77% of the eligible population) from whom caries data were obtained. Reported dmfs>0 for a child was considered as the primary caries outcome. Each study individual was geo-coded with respect to his/her residence parish (66 parishes in the region). Smoothed caries risk geo-maps, along with corresponding statistical certainty geo-maps, were produced by using the free software Rapid Inquiry Facility and the ESRI® ArcGIS system. Parish-level socioeconomic data were available. The overall proportion of caries-free (dmfs=0) children improved from 84.0% in 2006 to 88.6% in 2010. The ratio of maximum and minimum (parish-level) smoothed relative risks (SmRRs) increased from 1.76/0.44=4.0 in 2006 to 2.37/0.33=7.2 in 2010, which indicated an increased geographical polarization of early childhood caries in the population. Eight parishes showed evidential, positional changes in caries risk between 2006 and 2010; their corresponding SmRRs and statistical certainty ranks changed markedly. No considerable parallel changes in parish-level socioeconomic characteristics were seen during the same time period. Geo-maps based on caries risk can be used to monitor changes in caries risk over time. Thus, geo-mapping offers a convenient tool for evaluating the effectiveness of tailored health promotion and preventive care in child populations.

The sorting nexin, DSH3PX1, connects the axonal guidance receptor, Dscam, to the actin cytoskeleton.

PubMed

Worby, C A; Simonson-Leff, N; Clemens, J C; Kruger, R P; Muda, M; Dixon, J E

2001-11-09

Dock, an adaptor protein that functions in Drosophila axonal guidance, consists of three tandem Src homology 3 (SH3) domains preceding an SH2 domain. To develop a better understanding of axonal guidance at the molecular level, we used the SH2 domain of Dock to purify a protein complex from fly S2 cells. Five proteins were obtained in pure form from this protein complex. The largest protein in the complex was identified as Dscam (Down syndrome cell adhesion molecule), which was subsequently shown to play a key role in directing neurons of the fly embryo to correct positions within the nervous system (Schmucker, D., Clemens, J. C., Shu, H., Worby, C. A., Xiao, J., Muda, M., Dixon, J. E., and Zipursky, S. L. (2000) Cell 101, 671-684). The smallest protein in this complex (p63) has now been identified. We have named p63 DSH3PX1 because it appears to be the Drosophila orthologue of the human protein known as SH3PX1. DSH3PX1 is comprised of an NH(2)-terminal SH3 domain, an internal PHOX homology (PX) domain, and a carboxyl-terminal coiled-coil region. Because of its PX domain, DSH3PX1 is considered to be a member of a growing family of proteins known collectively as sorting nexins, some of which have been shown to be involved in vesicular trafficking. We demonstrate that DSH3PX1 immunoprecipitates with Dock and Dscam from S2 cell extracts. The domains responsible for the in vitro interaction between DSH3PX1 and Dock were also identified. We further show that DSH3PX1 interacts with the Drosophila orthologue of Wasp, a protein component of actin polymerization machinery, and that DSH3PX1 co-immunoprecipitates with AP-50, the clathrin-coat adapter protein. This evidence places DSH3PX1 in a complex linking cell surface receptors like Dscam to proteins involved in cytoskeletal rearrangements and/or receptor trafficking.

A Program for Educational Development, DeSoto Parish, Louisiana.

ERIC Educational Resources Information Center

Northwestern State Univ., Natchitoches, LA.

DeSoto Parish, Louisiana is a basically rural area in nature and in 1970 was recognized as below the norm in its educational program. This document outlines the plan for the restructuring of the curricular program with an attendant inservice program in an effort to correct instructional deficiencies and to create in parents, teachers, and students…

Sustaining the Heart: Attracting Latino Families to Inner-City Catholic Schools

ERIC Educational Resources Information Center

Suhy, Thomas M.

2012-01-01

Like many urban Catholic schools, St. Mary of Carmel Catholic School in Dallas, Texas, is faced with many challenges: filling empty seats; supporting increased costs; and, possible closure. The small parish is primarily Latino, but few parish families are enrolled in the school. This action research project used in-depth interviews to examine…

Lafayette Parish Cooperative Jail Project--LPCJP. Phase III Final Report.

ERIC Educational Resources Information Center

Lafayette Parish School Board, LA.

A three-phase project was conducted to further the education of inmates in the Lafayette (Louisiana) Parish Correctional Center. Phase I of the project was designed to prepare inmates to be eligible to take the General Educational Development (GED) test, and/or to teach life-coping skills so that they would better function in society upon their…

Tales of Wind and Water: Houma Indians and Hurricanes

ERIC Educational Resources Information Center

Dardar, T. Mayheart

2008-01-01

The majority of the Houma people live in the southern portions of Lafourche and Terrebonne parishes in south Louisiana. This author grew up in the Houma community that had formed in lower Plaquemines Parish, about thirty miles north of the mouth of the Mississippi River. The Houma community there was centered near the town of Venice with extended…

77 FR 22475 - Standard Instrument Approach Procedures, and Takeoff Minimums and Obstacle Departure Procedures...

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-16

..., Orig, CANCELLED Fort Huachuca Sierra Vista, AZ, Sierra Vista Muni-Libby AAF, RADAR-1, Orig Fort Huachuca Sierra Vista, AZ, Sierra Vista Muni-Libby AAF, RADAR-2, Orig Lake Havasu City, AZ, Lake Havasu... Opelousas, LA, St Landry Parish-Ahart Field, NDB RWY 18, Amdt 3 Opelousas, LA, St Landry Parish-Ahart Field...

District Composite Report: Winn Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in the District Composite Report. This report is specific to Winn Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data in the…

District Composite Report: St. Mary Parish, 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports for St. Mary Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data in the District…

District Composite Report: West Baton Rouge Parish. 2002-2003.

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to West Baton Rouge Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating…

District Composite Report: Ascension Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Ascension Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data…

District Composite Report: St. Helena Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Helena Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data in…

District Composite Report: Richland Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in the District Composite Report. This report is specific to Richland Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data in the…

District Composite Report: Lafayette Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Lafayette Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data…

District Composite Report: Rapides Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Rapides Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data…

District Composite Report: Vermilion Parish. 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports. This report is specific to Vermilion Parish. Each year, this report is updated by adding the most current year's data and deleting the data that are more than six years old. Incorporating longitudinal data…

District Composite Report: Catahoula Parish, 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports on Catahoula Parish. Each year, this report is updated by adding the most current year?s data and deleting the data that are more than six years old. Incorporating longitudinal data in the District…

District Composite Report: Iberville Parish, 2002-2003

ERIC Educational Resources Information Center

Louisiana State Department of Education, 2004

2004-01-01

Up to six years of data (the current year and the five previous years where available) are presented in Louisiana's District Composite Reports on Iberville Parish. Each year, this report is updated by adding the most current year?s data and deleting the data that are more than six years old. Incorporating longitudinal data in the District…

Second Line of Defense, Port of Buenos Aires and Exolgan Container Terminal Operational Testing and Evaluation Plan, Buenos Aires, Argentina

DOE Office of Scientific and Technical Information (OSTI.GOV)

Roberts, Bryan W.

2012-08-23

The Office of the Second Line of Defense (SLD) Megaports project team for Argentina will conduct operational testing and evaluation (OT&E) at Exolgan Container Terminal at the Port of Dock Sud from July 16-20, 2012; and at the Port of Buenos Aires from September 3-7, 2012. SLD is installing radiation detection equipment to screen export, import, and transshipment containers at these locations. The purpose of OT&E is to validate and baseline an operable system that meets the SLD mission and to ensure the system continues to perform as expected in an operational environment with Argentina Customs effectively adjudicating alarms.

Terminal homing position estimation forAutonomous underwater vehicle docking

DTIC Science & Technology

2017-06-01

used by the AUV to improve its position estimate. Due to the nonlinearity of the D-USBL measurements, the Extended Kalman Filter (EKF), Unscented...Kalman Filter (UKF) and forward and backward smoothing (FBS) filter were utilized to estimate the position of the AUV. After performance of these... filters was deemed unsatisfactory, a new smoothing technique called the Moving Horizon Estimation (MHE) with epi-splines was introduced. The MHE

15. HULETT NO. 4 AS SEEN FROM THE DECK OF ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

15. HULETT NO. 4 AS SEEN FROM THE DECK OF THE 'GEORGE M. CARL.' HULETT OPERATOR HAS DESCENDED INTO THE HOLD TO TAKE A 17-TON 'BITE' OF CANADIAN RED ORE. VIEW IS LOOKING EAST, WHERE THE TERMINAL TOWER MAY BE SEEN IN THE DISTANCE. - Pennsylvania Railway Ore Dock, Lake Erie at Whiskey Island, approximately 1.5 miles west of Public Square, Cleveland, Cuyahoga County, OH

Cloning and characterization of microbial activated Aedes aegypti MEK4 (AaMEK4): influences of noncatalytic domains on enzymatic activity.

PubMed

Wu, R C-C; Cho, W-L

2014-10-01

Protein kinases are known to be involved in a number of signal transduction cascades. Both the stress-activated Jun N-terminal kinase (JNK) and mitogen-activated protein kinase (MAPK) p38 pathways have been shown to correlate with the insect immune response to microbial infection. MAP kinase kinase 4 (MEK4) is an upstream kinase of JNK and p38 kinase. The cDNA of AaMEK4 was cloned and characterized. AaMEK4 was activated by microbial lysates of Gram-positive, Gram-negative bacteria and yeast. The conserved lysine (K112 ) and the putative phosphorylation sites (S238 and T242 ) were shown to be important for kinase activity by site-directed mutagenesis. A common MAPK docking site (MAPK_dsA) was found and in addition, a new nearby docking site, MAPK_dsB, was identified in the N-terminal noncatalytic domain of AaMEK4. MAPK_dsB was shown to be a unique element in the MEK4 family. In this study, both MAPK_dsA and _dsB were demonstrated to be important to AaMEK4 enzymatic activity for the downstream protein kinase, Aap38. © 2014 The Royal Entomological Society.

Tubular Crystals and Helical Arrays: Structural Determination of HIV-1 Capsid Assemblies Using Iterative Helical Real-Space Reconstruction

PubMed Central

Zhang, Peijun; Meng, Xin; Zhao, Gongpu

2013-01-01

Helical structures are important in many different life forms and are well-suited for structural studies by cryo-EM. A unique feature of helical objects is that a single projection image contains all the views needed to perform a three-dimensional (3D) crystallographic reconstruction. Here, we use HIV-1 capsid assemblies to illustrate the detailed approaches to obtain 3D density maps from helical objects. Mature HIV-1 particles contain a conical- or tubular-shaped capsid that encloses the viral RNA genome and performs essential functions in the virus life cycle. The capsid is composed of capsid protein (CA) oligomers which are helically arranged on the surface. The N-terminal domain (NTD) of CA is connected to its C-terminal domain (CTD) through a flexible hinge. Structural analysis of two- and three-dimensional crystals provided molecular models of the capsid protein (CA) and its oligomer forms. We determined the 3D density map of helically assembled HIV-1 CA hexamers at 16 Å resolution using an iterative helical real-space reconstruction method. Docking of atomic models of CA-NTD and CA-CTD dimer into the electron density map indicated that the CTD dimer interface is retained in the assembled CA. Furthermore, molecular docking revealed an additional, novel CTD trimer interface. PMID:23132072

Looking for inhibitors of the dengue virus NS5 RNA-dependent RNA-polymerase using a molecular docking approach

PubMed Central

Galiano, Vicente; Garcia-Valtanen, Pablo; Micol, Vicente; Encinar, José Antonio

2016-01-01

The dengue virus (DENV) nonstructural protein 5 (NS5) contains both an N-terminal methyltransferase domain and a C-terminal RNA-dependent RNA polymerase domain. Polymerase activity is responsible for viral RNA synthesis by a de novo initiation mechanism and represents an attractive target for antiviral therapy. The incidence of DENV has grown rapidly and it is now estimated that half of the human population is at risk of becoming infected with this virus. Despite this, there are no effective drugs to treat DENV infections. The present in silico study aimed at finding new inhibitors of the NS5 RNA-dependent RNA polymerase of the four serotypes of DENV. We used a chemical library comprising 372,792 nonnucleotide compounds (around 325,319 natural compounds) to perform molecular docking experiments against a binding site of the RNA template tunnel of the virus polymerase. Compounds with high negative free energy variation (ΔG <−10.5 kcal/mol) were selected as putative inhibitors. Additional filters for favorable druggability and good absorption, distribution, metabolism, excretion, and toxicity were applied. Finally, after the screening process was completed, we identified 39 compounds as lead DENV polymerase inhibitor candidates. Potentially, these compounds could act as efficient DENV polymerase inhibitors in vitro and in vivo. PMID:27784988

Investigation of the interaction between benzaldehyde thiosemicarbazone compounds and xanthine oxidase

NASA Astrophysics Data System (ADS)

Li, Mengrong; Yu, Yanying; Liu, Jing; Chen, Zelu; Cao, Shuwen

2018-05-01

A series of substituted benzaldehyde thiosemicarbazide compounds (1-7) were synthesized as xanthine oxidase (XO) inhibitors, and the interactions between substituted benzaldehyde thiosemicarbazide compounds (1-7) and XO were studied by ultraviolet spectroscopy, fluorescence spectroscopy, and molecular docking. It was found that the hydrogen bond and hydrophobicity were the main interactions between substituted benzaldehyde thiosemicarbazide compounds and XO, and introducing sbnd OH at the para position of the benzene ring and a Ph- or Me-group at the amino terminal of compound 4 increased the modifier's inhibitory activity. The results suggest that the newly introduced benzene ring interacted with the hydrophobic cavity of XO by means of the π-π stacking force between the newly introduced benzene ring and the aromatic amino acid residues, such as the Phe residue, which greatly increased the modifier's inhibitory activity. We conclude that introducing the Ph-group at the amino terminal of compound 4 and the sbnd OH group at the para position of the benzene ring was a good route to obtain novel XO inhibitors. Fluorescence spectroscopy assisted by 8-anilino-1-naphthalenesulfonic acid fluorescence probing and molecular docking were helpful for achieving a preliminary and relatively clear understanding of the interactions between target compounds and XO, which deserve further study.

STS-89 M.S. Andrew Thomas, Ph.D., participates in TCDT

NASA Technical Reports Server (NTRS)

1998-01-01

STS-89 Mission Specialist Andrew Thomas, Ph.D. gets ready to drive an M-113 armored personnel carrier as part of Terminal Countdown Demonstration Test (TCDT) activities. The TCDT is held at KSC prior to each Space Shuttle flight to provide crews with an opportunity to participate in simulated countdown activities. Standing inside the M-113 is Dr. Thomas while George Hoggard, a training officer with KSC Fire Services, sits atop the vehicle. The STS-89 mission will be the eighth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Dr. Thomas will transfer to the space station, succeeding David Wolf, M.D., who will return to Earth aboard Endeavour. Dr. Thomas will live and work on Mir until June. STS-89 is scheduled for a Jan. 22 liftoff at 9:48 p.m.

KSC-98pc116

NASA Image and Video Library

1998-01-09

STS-89 Commander Terrence Wilcutt gets ready to train in an M-113 armored personnel carrier as part of Terminal Countdown Demonstration Test (TCDT) activities. The TCDT is held at KSC prior to each Space Shuttle flight to provide crews with an opportunity to participate in simulated countdown activities. Standing inside the M-113 vehicle is Wilcutt while George Hoggard, a training officer with KSC Fire Services, sits atop the armored personnel carrier. The STS-89 mission will be the eighth docking of the Space Shuttle with the Russian Space Station Mir. After docking, STS-89 Mission Specialist Andrew Thomas, Ph.D., will transfer to the space station, succeeding David Wolf, M.D., who will return to Earth aboard Endeavour. Dr. Thomas will live and work on Mir until June. STS-89 is scheduled for a Jan. 22 liftoff at 9:48 p.m

Role of health determinants in a measles outbreak in Ecuador: a case-control study with aggregated data.

PubMed

Rivadeneira, María F; Bassanesi, Sérgio L; Fuchs, Sandra C

2018-02-20

In 2011-2012, an outbreak of measles occurred in Ecuador. This study sought to ascertain which population characteristics were associated. Case-control study of aggregate data. The unit of analysis was the parish (smallest geographic division). The national communicable disease surveillance database was used to identify 52 case parishes (with at least one confirmed case of measles) and 972 control parishes (no cases of measles). A hierarchical model was used to determine the association of measles with population characteristics and access to health care. Case parishes were mostly urban and had a higher proportion of children under 1 year of age, heads of household with higher educational attainment, larger indigenous population, lower rates of measles immunization, and lower rates of antenatal care visit attendance. On multivariate analysis, associations were found with educational attainment of head of household ≥8 years (OR: 0.29; 95%CI 0.15-0.57) and ≥1.4% indigenous population (OR: 3.29; 95%CI 1.63-6.68). Antenatal care visit attendance had a protective effect against measles (OR: 0.98; 95%CI 0.97-0.99). Measles vaccination was protective of the outbreak (OR: 0.97; 95%CI 0.95-0.98). The magnitude of these associations was modest, but represents the effect of single protective factors, capable of acting at the population level regardless of socioeconomic, biological, and environmental confounding factors. In Ecuador, the parishes with the highest percentage of indigenous populations and those with the lowest vaccination coverage were the most vulnerable during the measles outbreak.

Independent signaling by Drosophila insulin receptor for axon guidance and growth

PubMed Central

Li, Caroline R.; Guo, Dongyu; Pick, Leslie

2014-01-01

The Drosophila insulin receptor (DInR) regulates a diverse array of biological processes including growth, axon guidance, and sugar homeostasis. Growth regulation by DInR is mediated by Chico, the Drosophila homolog of vertebrate insulin receptor substrate proteins IRS1–4. In contrast, DInR regulation of photoreceptor axon guidance in the developing visual system is mediated by the SH2-SH3 domain adaptor protein Dreadlocks (Dock). In vitro studies by others identified five NPXY motifs, one in the juxtamembrane region and four in the signaling C-terminal tail (C-tail), important for interaction with Chico. Here we used yeast two-hybrid assays to identify regions in the DInR C-tail that interact with Dock. These Dock binding sites were in separate portions of the C-tail from the previously identified Chico binding sites. To test whether these sites are required for growth or axon guidance in whole animals, a panel of DInR proteins, in which the putative Chico and Dock interaction sites had been mutated individually or in combination, were tested for their ability to rescue viability, growth and axon guidance defects of dinr mutant flies. Sites required for viability were identified. Unexpectedly, mutation of both putative Dock binding sites, either individually or in combination, did not lead to defects in photoreceptor axon guidance. Thus, either sites also required for viability are necessary for DInR function in axon guidance and/or there is redundancy built into the DInR/Dock interaction such that Dock is able to interact with multiple regions of DInR. We also found that simultaneous mutation of all five NPXY motifs implicated in Chico interaction drastically decreased growth in both male and female adult flies. These animals resembled chico mutants, supporting the notion that DInR interacts directly with Chico in vivo to control body size. Mutation of these five NPXY motifs did not affect photoreceptor axon guidance, segregating the roles of DInR in the processes of growth and axon guidance. PMID:24478707

Making Commissions Work: A Handbook for Parish Religious Education Boards/Commissions.

ERIC Educational Resources Information Center

McClain, Maria Thornton, Ed.

This handbook is part of an ongoing process to share models of Total Catholic Education boards, religious education boards, and Catholic school boards. The purpose of the book is two-fold: (1) to provide a rationale for having a group within the parish that sets the direction for the religious education of children, youth, and adults; and (2) to…

Pilot Student-Teacher Aide Program for the Lincoln Parish School Board. Final Report.

ERIC Educational Resources Information Center

Coco, Harold B.

The Lincoln Parish School Board, with assistance from the Gulf South Research Institute staff, conducted a 10-week pilot student-teacher aide program in which 72 college education majors worked as teacher aides in eight high schools and elementary schools for approximately 10 hours a week at $1.50 per hour. Consultants for the program were hired…

5. Historic American Buildings Survey Mark C. Bisgrove, Photographer 1971 ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

5. Historic American Buildings Survey Mark C. Bisgrove, Photographer 1971 WEST ELEVATION (FRONT) OF MODERN PARISH HALL FROM SOUTHWEST (CONNECTS CHURCH ON SOUTH WALL AT SOUTHEAST CORNER). PARISH CEMETERY IN FOREGROUND WITH BROWNSTONE GOTHIC, MONUMENT AT EXTREME LEFT TO ROBERT HALLOWELL GARDINER, DESIGNED BY RICHARD UPJOHN, c. 1864. - Christ Church (Episcopal), 1 Dresden Avenue, Gardiner, Kennebec County, ME

33 CFR 117.501 - Teche Bayou.

Code of Federal Regulations, 2012 CFR

2012-07-01

... bridges shall open on signal if at least four hours notice is given: (1) St. Mary Parish bridge, mile 3.9 at Calumet. (2) St. Mary Parish bridge, mile 11.8 at Centerville. (3) S3069 bridge, mile 16.3 at Franklin. (4) S322 bridge, mile 17.2 at Franklin. (5) S323 bridge, mile 22.3 at Oaklawn. (6) St. Mary...

33 CFR 117.501 - Teche Bayou.

Code of Federal Regulations, 2014 CFR

2014-07-01

... bridges shall open on signal if at least four hours notice is given: (1) St. Mary Parish bridge, mile 3.9 at Calumet. (2) St. Mary Parish bridge, mile 11.8 at Centerville. (3) S3069 bridge, mile 16.3 at Franklin. (4) S322 bridge, mile 17.2 at Franklin. (5) S323 bridge, mile 22.3 at Oaklawn. (6) St. Mary...

33 CFR 117.501 - Teche Bayou.

Code of Federal Regulations, 2011 CFR

2011-07-01

... bridges shall open on signal if at least four hours notice is given: (1) St. Mary Parish bridge, mile 3.9 at Calumet. (2) St. Mary Parish bridge, mile 11.8 at Centerville. (3) S3069 bridge, mile 16.3 at Franklin. (4) S322 bridge, mile 17.2 at Franklin. (5) S323 bridge, mile 22.3 at Oaklawn. (6) St. Mary...

33 CFR 117.501 - Teche Bayou.

Code of Federal Regulations, 2013 CFR

2013-07-01

... bridges shall open on signal if at least four hours notice is given: (1) St. Mary Parish bridge, mile 3.9 at Calumet. (2) St. Mary Parish bridge, mile 11.8 at Centerville. (3) S3069 bridge, mile 16.3 at Franklin. (4) S322 bridge, mile 17.2 at Franklin. (5) S323 bridge, mile 22.3 at Oaklawn. (6) St. Mary...

33 CFR 117.501 - Teche Bayou.

Code of Federal Regulations, 2010 CFR

2010-07-01

... bridges shall open on signal if at least four hours notice is given: (1) St. Mary Parish bridge, mile 3.9 at Calumet. (2) St. Mary Parish bridge, mile 11.8 at Centerville. (3) S3069 bridge, mile 16.3 at Franklin. (4) S322 bridge, mile 17.2 at Franklin. (5) S323 bridge, mile 22.3 at Oaklawn. (6) St. Mary...

78 FR 30901 - Record of Decision and Wetland/Floodplain Statement of Findings for the W.A. Parish Post...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-05-23

... W.A. Parish Plant in Fort Bend County, Texas. A new 80-MW natural gas-fired turbine, currently under... the CO 2 capture facility, the combustion turbine and heat recovery steam generator (CT/HRSG) area... maintenance power sources or by new metered service from a local retail provider. Potential construction...

Ouachita Parish Public Library, Final Performance Report for Library Services and Construction Act (LSCA) Title VI, Library Literacy Program, 1992-1993.

ERIC Educational Resources Information Center

Camp, Gloria S.

The Ouachita Parish Public Library (Louisiana) conducted a project that involved recruitment, coalition building, public awareness, training, basic literacy, collection development, tutoring, technology, and English as a Second Language (ESL) programs. The project served a community of over 200,000 people, and targeted the learning disabled,…

Geomorphic Investigation of Shreveport to Daingerfield Navigation Project

DTIC Science & Technology

1993-12-01

Red River Parish , Louisiana ," Southeastern Geological Society of America 22, (4), 17. Harrelson, D. W., and Smith, L. M. (1988...34Thermoluminescence dating of a selected Red River terrace, Red River Parish , Louisiana ,* Geological Society of America Abstracts, SE Sectional...28 cm. - (Technical report ; 61-93-31) Includes bilgehoireforences. 1. Arhelgclgeology - Red River Watershed (Tex.-La.) 2. Geonorphol- ogy-- Louisiana

33 CFR 3.40-60 - Sector Lower Mississippi River Marine Inspection Zone and Captain of the Port Zone.

Code of Federal Regulations, 2010 CFR

2010-07-01

... the east bank of the Mississippi River at the Louisiana-Mississippi border, thence south along the... boundary of the Old River Lock Structure, thence west along the southern bank of the Lower Old River, to... River Parish and DeSoto Parish to the Texas-Louisiana Border, including Lasalle, Caldwell, Caddo...

78 FR 17720 - Notice of Lodging of Revised Second Agreement and Order Regarding Modification of the Consent...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-22

... publically owned treatment works owned and operated by the City of Baton Rouge and the Parish of East Baton... December 31, 2018 and the City/Parish would implement additional work including installation of a... 20044-7611. Please enclose a check or money order for $7.00 (25 cents per page reproduction cost...

Water resources of Red River Parish, Louisiana

USGS Publications Warehouse

Newcome, Roy; Page, Leland Vernon

1963-01-01

Red River Parish is on the eastern flank of the Sabine uplift in northwestern Louisiana. The 'area is underlain by lignitic clay and sand of Paleocene and Eocene age which dip to the east at the rate of about 30 feet per mile. The Red River is entrenched in these rocks in the western part of the parish. Alternating valley filling and erosion during the Quaternary period have resulted in the present lowland with flanking terraces. In the flood-plain area moderate to large quantities of very hard, iron-bearing water, suitable for irrigation, are available to wells in the alluvial sand and gravel of Quaternary age. The aquifer ranges in thickness from 20 to slightly more than 100 feet. It is recharged by downward seepage of rainfall through overlying clay and silt, by inflow from older sands adjacent to and beneath the entrenched valley, and by infiltration from the streams where the water table is below stream level during flood stages or as a result of pumping. Water levels are highest in the middle of the valley. Ground water moves mainly toward the Red River on the east and Bayou Pierre on the west, but small amounts move down the valley. Computations based on water-level and aquifer-test data indicate that the Quaternary alluvium contains more than 330 billion gallons of ground water in storage and that the maximum discharge of ground water to the streams is slightly more than 30 mgd (million gallons per day). At times of high river stage, surface water flows into the aquifer at a rate that depends in part upon the height and duration of the river stage. Moderate supplies of soft, iron-bearing water may be obtained from dissected Pleistocene terrace deposits that flank the flood plains of the Red River and Black Lake Bayou. However, the quantity of water that can be pumped from these deposits varies widely from place to place because of differences in the areal extent and saturated thickness of the segments of the deposits; this extent and thickness are governed in turn by the amount of erosion the deposits have undergone. Beds of fine-grained lignitic sands of Tertiary age contain water of generally good quality to depths of 150 to 450 feet. The thinness and low permeability of the sands restrict their development to low-yield wells. Water from these sands in the western part of the parish, where they lie beneath the alluvial valley, is more mineralized than that from the younger Tertiary sands exposed in the east-central area. Streamflow records have been collected on the principal streams in Red River Parish since 1939. Additional spot low-flow data were obtained on several small streams originating within the parish for a study made in connection with the preparation of this report. Quality-of-water data for streams in the parish were collected on an occasional spot-sampling basis prior to and during this investigation. The largest source of surface water in the parish is the Red River, which drains approximately 63,400 square miles upstream from the parish. The Red River has an average flow of about 13,100 cfs (cubic feet per second), or about 8,500 mgd. Many of the streams that drain the upland area are not dependable sources of supply because their flows are not well sustained during dry seasons. The average annual precipitation over the parish is about 52 inches, of which about 17 inches becomes runoff; this runoff is equivalent to a continuous flow of about 1.25 cfs per square mile. Seasonal and annual runoff varies, but no significant trends have been noticed. The principal surface-water problems in the parish pertain to flood control, drainage, irrigation, and navigation. Flood problems have been alleviated considerably by the operation of Denison Dam (Lake Texoma), the completion of levees on the Red River, channel improvements on Bayou Pierre, and the completion of Wallace Lake reservoir on Cypress Bayou. There are wet lands along the Red River that would be very productive if properly drained

DNA-binding regulates site-specific ubiquitination of IRF-1.

PubMed

Landré, Vivien; Pion, Emmanuelle; Narayan, Vikram; Xirodimas, Dimitris P; Ball, Kathryn L

2013-02-01

Understanding the determinants for site-specific ubiquitination by E3 ligase components of the ubiquitin machinery is proving to be a challenge. In the present study we investigate the role of an E3 ligase docking site (Mf2 domain) in an intrinsically disordered domain of IRF-1 [IFN (interferon) regulatory factor-1], a short-lived IFNγ-regulated transcription factor, in ubiquitination of the protein. Ubiquitin modification of full-length IRF-1 by E3 ligases such as CHIP [C-terminus of the Hsc (heat-shock cognate) 70-interacting protein] and MDM2 (murine double minute 2), which dock to the Mf2 domain, was specific for lysine residues found predominantly in loop structures that extend from the DNA-binding domain, whereas no modification was detected in the more conformationally flexible C-terminal half of the protein. The E3 docking site was not available when IRF-1 was in its DNA-bound conformation and cognate DNA-binding sequences strongly suppressed ubiquitination, highlighting a strict relationship between ligase binding and site-specific modification at residues in the DNA-binding domain. Hyperubiquitination of a non-DNA-binding mutant supports a mechanism where an active DNA-bound pool of IRF-1 is protected from polyubiquitination and degradation.

Identification and characterization of a calmodulin binding domain in the plasma membrane Ca2+-ATPase from Trypanosoma equiperdum.

PubMed

Ramírez-Iglesias, José Rubén; Pérez-Gordones, María Carolina; Del Castillo, Jesús Rafael; Mijares, Alfredo; Benaim, Gustavo; Mendoza, Marta

2018-05-09

The plasma membrane Ca 2+ -ATPase (PMCA) from trypanosomatids lacks a classical calmodulin (CaM) binding domain, although CaM stimulated activities have been detected by biochemical assays. Recently we proposed that the Trypanosoma equiperdum CaM-sensitive PMCA (TePMCA) contains a potential 1-18 CaM-binding motif at the C-terminal region of the pump. In the present study, we evaluated the potential CaM-binding motifs using CaM from Trypanosoma cruzi and either the recombinant full length TePMCA C-terminal sequence (P14) or synthetic peptides comprising different regions of the C-terminal domain. We demonstrated that P14 and a synthetic peptide corresponding to residues 1037-1062 (which contains the predicted 1-18 binding motif) competed efficiently for binding to TcCaM, exhibiting similar IC 50 s of 200 nM. A stable complex of this peptide and TcCaM was formed in the presence of Ca 2+ , as determined by native-polyacrylamide gel electrophoresis. A predicted structure obtained by molecular docking showed an interaction of the 1-18 binding motif with the Ca 2+ /CaM complex. Moreover, when the peptide was incubated with CaM and Ca 2+ , a blue shift in the tryptophan fluorescence spectrum (from 350 to 329 nm) was observed. Substitutions at W 1039 and F 1056 , strongly decreased both CaM-peptide interaction and the complex assembly. Our results demonstrated the presence of a functional 1-18 motif at the TePMCA C-terminal domain. Furthermore, on the basis of spectrofluorometric assays and the resulting structure modeled by docking we propose that the L 1042 and W 1060 residues might also participate as anchors to form a 1-4-18-22 motif. Copyright © 2018 Elsevier B.V. All rights reserved.

The geology and ground water resources of Calcasieu Parish, Louisiana

USGS Publications Warehouse

Harder, Alfred H.

1960-01-01

Large quantities of fresh ground water are available in Calcasieu Parish. Fresh water is present in sand of Recent, Pleistocene, Pliocene, and Miocene ages, although locally only small supplies for rural or stock use can be obtained from the shallow sand lenses of Recent and Pleistocene ages. The principal fresh-water-bearing sands are the '200-foot,' '500-foot,' and '700-foot' sands of the Chicot aquifer of Pleistocene age, from which 105 million gallons is pumped daily. A yield of as much as 4,500 gpm (gallons per minute) has been obtained from a single well. The sands are typical of the Chicot aquifer throughout southwestern Louisiana in that generally they grade from fine sand at the top to coarse sand and gravel at the base of the aquifer. The coefficient of permeability of the principal sands in Calcasieu Parish ranges from 660 to about 2,000 gpd (gallons per day) per square foot and averages 1,200 gpd per square foot. The permeability of the sands generally varies with textural changes. The maximum depth of occurrence of fresh ground water in Calcasieu Parish ranges from about 700 feet to 2,500 feet below mean sea level; locally, however, where the sands overlie structures associated with oil fields, the maximum depth is less than 300 feet. Pumping has caused water levels to decline, at varying rates, in all the sands. In the '200-foot' sand they are declining at a rate of about 2 feet per year. In the industrial district of Calcasieu Parish, levels in the '500-foot' sand are declining at a rate of about 5 feet per year, and in the '700-foot' sand at a rate of about 3.5 feet per year. Salt-water contamination is accompanying the water-level decline in the '700-foot' sand in the central part of the parish. Quality-of-water data indicate that water from wells screened in the Chicot aquifer generally is suitable for some uses without treatment but would require treatment to be satisfactory for other uses. The temperature of the water ranges from 70? to 79?F. The lenticular sands of Pliocene and Miocene ages have not been used as a source of fresh ground water in Calcasieu Parish; however, north of the Houston River these formations contain fresh water, and the water contained in these formations in other parts of southwestern Louisiana is known to be soft and suitable for most purposes.

Ethnobotany of Indigenous Saraguros: Medicinal Plants Used by Community Healers "Hampiyachakkuna" in the San Lucas Parish, Southern Ecuador.

PubMed

Andrade, José M; Lucero Mosquera, Hernán; Armijos, Chabaco

2017-01-01

This paper reports the results of an ethnobotanical survey on the use of medicinal plants by community healers "Hampiyachakkuna" in the San Lucas Parish, province of Loja, Ecuador. A particular ethnic group, the indigenous Saraguros, inhabits this region. This study reports 183 plant species used in 75 different curative therapies by the Saraguro healers.

Public School Desegregation/Redesign: A Case Study in East Baton Rouge Parish, Louisiana. Urban Education Reports Number Fourteen.

ERIC Educational Resources Information Center

Stone, Frank Andrews

This publication presents a case study of the public school desegregation and redesign program of the East Baton Rouge Parish (Louisiana) School System, focusing on the 5 years from 1987 to 1992. Chapter 1 describes the setting and background, the sociocultural history of the area since pre-Revolutionary War days, the role and treatment of African…

Improving the accuracy of livestock distribution estimates through spatial interpolation.

PubMed

Bryssinckx, Ward; Ducheyne, Els; Muhwezi, Bernard; Godfrey, Sunday; Mintiens, Koen; Leirs, Herwig; Hendrickx, Guy

2012-11-01

Animal distribution maps serve many purposes such as estimating transmission risk of zoonotic pathogens to both animals and humans. The reliability and usability of such maps is highly dependent on the quality of the input data. However, decisions on how to perform livestock surveys are often based on previous work without considering possible consequences. A better understanding of the impact of using different sample designs and processing steps on the accuracy of livestock distribution estimates was acquired through iterative experiments using detailed survey. The importance of sample size, sample design and aggregation is demonstrated and spatial interpolation is presented as a potential way to improve cattle number estimates. As expected, results show that an increasing sample size increased the precision of cattle number estimates but these improvements were mainly seen when the initial sample size was relatively low (e.g. a median relative error decrease of 0.04% per sampled parish for sample sizes below 500 parishes). For higher sample sizes, the added value of further increasing the number of samples declined rapidly (e.g. a median relative error decrease of 0.01% per sampled parish for sample sizes above 500 parishes. When a two-stage stratified sample design was applied to yield more evenly distributed samples, accuracy levels were higher for low sample densities and stabilised at lower sample sizes compared to one-stage stratified sampling. Aggregating the resulting cattle number estimates yielded significantly more accurate results because of averaging under- and over-estimates (e.g. when aggregating cattle number estimates from subcounty to district level, P <0.009 based on a sample of 2,077 parishes using one-stage stratified samples). During aggregation, area-weighted mean values were assigned to higher administrative unit levels. However, when this step is preceded by a spatial interpolation to fill in missing values in non-sampled areas, accuracy is improved remarkably. This counts especially for low sample sizes and spatially even distributed samples (e.g. P <0.001 for a sample of 170 parishes using one-stage stratified sampling and aggregation on district level). Whether the same observations apply on a lower spatial scale should be further investigated.

Molecular docking studies of (1E,3E,5E)-1,6-Bis(substituted phenyl)hexa-1,3,5-triene and 1,4-Bis(substituted trans-styryl)benzene analogs as novel tyrosinase inhibitors.

PubMed

Ha, Young Mi; Lee, Hye Jin; Park, Daeui; Jeong, Hyoung Oh; Park, Ji Young; Park, Yun Jung; Lee, Kyung Jin; Lee, Ji Yeon; Moon, Hyung Ryong; Chung, Hae Young

2013-01-01

We simulated the docking of the tertiary structure of mushroom tyrosinase with our compounds. From the structure-tyrosinase inhibitory activity relationship, it is notable that compounds 4, 8 and 11 showed similar or better activity rates than kojic acid which was used as a positive control. Compounds 17, 21, and 23 among benzene analogs that possess the same substituent showed significantly lower tyrosinase inhibitory effects. Therefore, we have confirmed that among the compounds showing better tyrosinase inhibitory effects than kojic acid, the compounds with triene analogs have better tyrosinase inhibitory effect than the compounds with benzene analogs. Docking simulation suggested the mechanism of compounds by several key residues which had possible hydrogen bonding interactions. The pharmacophore model underlined the features of active compounds, 4,4'-((1E,3E,5E)-hexa-1,3,5-triene-1,6-diyl)diphenol, 5,5'-((1E,3E,5E)-hexa-1,3,5-triene-1,6-diyl)bis(2-methoxy-phenol), and 5,5'-((1E,3E,5E)-hexa-1,3,5-triene-1,6-diyl)dibenzene-1,3-diol among triene derivatives which had several hydrogen bond groups on both terminal rings. The soundness of the docking results and the agreement with the pharmacophores suggest that it can be conveniently exploited to design inhibitors with an improved affinity for tyrosinase.

Identification of chikungunya virus nsP2 protease inhibitors using structure-base approaches.

PubMed

Nguyen, Phuong T V; Yu, Haibo; Keller, Paul A

2015-04-01

The nsP2 protease of chikungunya virus (CHIKV) is one of the essential components of viral replication and it plays a crucial role in the cleavage of polyprotein precursors for the viral replication process. Therefore, it is gaining attention as a potential drug design target against CHIKV. Based on the recently determined crystal structure of the nsP2 protease of CHIKV, this study identified potential inhibitors of the virus using structure-based approaches with a combination of molecular docking, virtual screening and molecular dynamics (MD) simulations. The top hit compounds from database searching, using the NCI Diversity Set II, with targeting at five potential binding sites of the nsP2 protease, were identified by blind dockings and focused dockings. These complexes were then subjected to MD simulations to investigate the stability and flexibility of the complexes and to gain a more detailed insight into the interactions between the compounds and the enzyme. The hydrogen bonds and hydrophobic contacts were characterized for the complexes. Through structural alignment, the catalytic residues Cys1013 and His1083 were identified in the N-terminal region of the nsP2 protease. The absolute binding free energies were estimated by the linear interaction energy approach and compared with the binding affinities predicted with docking. The results provide valuable information for the development of inhibitors for CHIKV. Crown Copyright © 2015. Published by Elsevier Inc. All rights reserved.

A new method for estimating carbon dioxide emissions from transportation at fine spatial scales

PubMed Central

Shu, Yuqin; Reams, Margaret

2016-01-01

Detailed estimates of carbon dioxide (CO2) emissions at fine spatial scales are useful to both modelers and decision makers who are faced with the problem of global warming and climate change. Globally, transport related emissions of carbon dioxide are growing. This letter presents a new method based on the volume-preserving principle in the areal interpolation literature to disaggregate transportation-related CO2 emission estimates from the county-level scale to a 1 km2 grid scale. The proposed volume-preserving interpolation (VPI) method, together with the distance-decay principle, were used to derive emission weights for each grid based on its proximity to highways, roads, railroads, waterways, and airports. The total CO2 emission value summed from the grids within a county is made to be equal to the original county-level estimate, thus enforcing the volume-preserving property. The method was applied to downscale the transportation-related CO2 emission values by county (i.e. parish) for the state of Louisiana into 1 km2 grids. The results reveal a more realistic spatial pattern of CO2 emission from transportation, which can be used to identify the emission ‘hot spots’. Of the four highest transportation-related CO2 emission hotspots in Louisiana, high-emission grids literally covered the entire East Baton Rouge Parish and Orleans Parish, whereas CO2 emission in Jefferson Parish (New Orleans suburb) and Caddo Parish (city of Shreveport) were more unevenly distributed. We argue that the new method is sound in principle, flexible in practice, and the resultant estimates are more accurate than previous gridding approaches. PMID:26997973

Is Access to Outpatient Neurosurgery Affected by Narrow Insurance Networks? Results From Statewide Analysis of Marketplace Plans in Louisiana.

PubMed

Dossani, Rimal H; Kalakoti, Piyush; Nanda, Anil; Guthikonda, Bharat; Tumialán, Luis M

2018-02-06

The main objective of the Affordable Care Act (ACA) was to make health insurance affordable to all Americans while addressing the lack of coverage for 48 million people. In the face of rapidly increasing enrollment and rising demand for inexpensive plans, insurance providers are limiting in-network physicians. Provider networks offering plans with limited in-network physicians have become known as "narrow networks." To assesses the adequacy of ACA marketplace plans for outpatient neurosurgery in Louisiana. The Marketplace Public Use Files were searched for all "silver" plans. A total of 7 silver plans were identified in Louisiana. Using the plans' online directories, a search of in-network neurosurgeons in Louisiana parishes with >100 000 population was performed. The primary outcome was lack of in-network neurosurgeon(s) in silver plans within 50 miles of selected zip code for each parish with >100 000 population. Plans without in-network neurosurgeon(s) are labeled as neurosurgeon-deficient plans. Several plans in Louisiana are neurosurgeon deficient, ie no in-network neurosurgeon within 50 miles of the designated parish zip code. Company A's plan 3 is deficient in all 5 parishes, while company C and company D silver plans are deficient in 4 out of 14 (29%). Combined results from all counties and plans demonstrate that 43% (3 out of 7) of all silver plans in Louisiana are neurosurgeon deficient in at least 4 parishes with population >100 000. In Louisiana, narrow networks have limited access to neurosurgical care for those patients with ACA silver plans. Copyright © 2018 by the Congress of Neurological Surgeons

STS-84 Crew speaking at TCDT Press Briefing

NASA Technical Reports Server (NTRS)

1997-01-01

STS-84 crew members listen intently to Commander Charles J. Precourt, at far right, as he talks to news media representatives and other onlookers at Launch Pad 39A during the Terminal Countdown Demonstration Test (TCDT). Other crew members, from left, are Mission Specialist Edward Tsang Lu, Pilot Eileen Marie Collins, and Mission Specialists Carlos I. Noriega, Jean-Francois Clervoy of the European Space Agency, C. Michael Foale, and Elena V. Kondakova of the Russian Space Agency. STS-84 will be the sixth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Foale will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff.

KSC-97pc757

NASA Image and Video Library

1997-04-29

STS-84 crew members ride in and learn how to operate an M-113 armored personnel carrier as part of the Terminal Countdown Demonstration Test (TCDT) activities. Seated inside the M-113, from left, are Mission Specialist Jean-Francois Clervoy, Pilot Eileen Marie Collins (waving) and Commander Charles J. Precourt, in front. George Hoggard, a training officer with KSC Fire Services, sits on top of the personnel carrier. STS-84 aboard the Space Shuttle Atlantis will be the sixth docking of the Space Shuttle with the Russian Space Station Mir. After docking, STS-84 Mission Specialist C. Michael Foale will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff

Video guidance, landing, and imaging systems

NASA Technical Reports Server (NTRS)

Schappell, R. T.; Knickerbocker, R. L.; Tietz, J. C.; Grant, C.; Rice, R. B.; Moog, R. D.

1975-01-01

The adaptive potential of video guidance technology for earth orbital and interplanetary missions was explored. The application of video acquisition, pointing, tracking, and navigation technology was considered to three primary missions: planetary landing, earth resources satellite, and spacecraft rendezvous and docking. It was found that an imaging system can be mechanized to provide a spacecraft or satellite with a considerable amount of adaptability with respect to its environment. It also provides a level of autonomy essential to many future missions and enhances their data gathering ability. The feasibility of an autonomous video guidance system capable of observing a planetary surface during terminal descent and selecting the most acceptable landing site was successfully demonstrated in the laboratory. The techniques developed for acquisition, pointing, and tracking show promise for recognizing and tracking coastlines, rivers, and other constituents of interest. Routines were written and checked for rendezvous, docking, and station-keeping functions.

A Study of Changes in Dental Health Care Behavior of 4-H Youth in Selected Louisiana Parishes. R and T--Summary 51.

ERIC Educational Resources Information Center

Jones, Michael Alan

The effectiveness of the Dental Hygiene Education Program in changing the dental health care practices of 4-H club youth in four Louisiana parishes and youth knowledge of dental care principles were studied in this before-after experimental design. The study sample consisted of 258 youth from 10 4-H clubs. Subjects completed a four-item…

33 CFR 165.T11-0523 - Safety Zone; Houma Navigation Canal, From Waterway Mile Markers 19.0 to 20.0, Southwest of Bayou...

Code of Federal Regulations, 2012 CFR

2012-07-01

... Canal, From Waterway Mile Markers 19.0 to 20.0, Southwest of Bayou Plat, Bank to Bank, Terrebonne Parish....T11-0523 Safety Zone; Houma Navigation Canal, From Waterway Mile Markers 19.0 to 20.0, Southwest of... Mile Markers 19.0 to 20.0, Southwest of Bayou Plat, bank to bank, Terrebonne Parish, Louisiana. (b...

76 FR 28311 - Drawbridge Operation Regulations; Bayou Liberty, Mile 2.0, St. Tammany Parish, Slidell, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-17

...,'' and then click on the balloon shape in the ``Actions'' column. If you submit your comments by mail or... St. Tammany Parish. The vertical clearance is 7.59 feet (2.31m) above the 2% flowline, elevation 2.5 feet (0.76m) NAVD 1988. Presently, under 33 CFR 117.469, the draw of the S433 Bridge, mile 2.0, at...

Public Water Supply, Red River Parish, Louisiana.

DTIC Science & Technology

1981-03-01

overpumpage with resultant salt Infiltration. Health officials in the parish have com- plained about the poor quality of well water. (See letter from Dr...However, the effect of solid waste and sewage resulting from Grand Bayou Reservoir user activities can be minimized through State Board of Health ...quality and the associated public health hazards. (1-b) Possible complaints from land owners against land acquisition for pipeline right-of-way. (1-c

How Did Illiterates Fare as Literacy Became Almost Universal? Evidence from Nineteenth and Early Twentieth Century Liverpool

ERIC Educational Resources Information Center

Mitch, David

2003-01-01

A sample of marriage registers from the parish of Liverpool St. Nicholas Church in England between 1839-1927 is used to examine changing characteristics of grooms who signed with a mark over this period. The proportion of illiterate grooms in the parish fell from about a third to under 5%. Age at marriage and likelihood of being a widower rose…

Ethnobotany of Indigenous Saraguros: Medicinal Plants Used by Community Healers “Hampiyachakkuna” in the San Lucas Parish, Southern Ecuador

PubMed Central

Lucero Mosquera, Hernán; Armijos, Chabaco

2017-01-01

This paper reports the results of an ethnobotanical survey on the use of medicinal plants by community healers “Hampiyachakkuna” in the San Lucas Parish, province of Loja, Ecuador. A particular ethnic group, the indigenous Saraguros, inhabits this region. This study reports 183 plant species used in 75 different curative therapies by the Saraguro healers. PMID:28744470

Terrebonne Parish-Wide Forced Drainage System, Terrebonne Parish, Louisiana.

DTIC Science & Technology

1983-08-01

Gibson, Louisiana show Bayou Lafourche deposits at the surface capping Red River deposits, in turn overlying Teche Mississippi levees. There are five...eastern side of the alluvial *valley. Following the diversion of the Mississippi River from the Teche channel, the Red River continued to flow within...the Mississippi River and Red River . These alluvial sediments were left by the distributary streams of several deltas of the Mississippi River . The

Louisiana ground-water map no. 11: potentiometric surface, Spring, 1993, and water-level changes, 1987-93, of the Gonzales-New Orleans Aquifer in southeastern Louisiana

USGS Publications Warehouse

Walters, David J.

1995-01-01

The Gonzales-New Orleans aquifer is an important source of fresh water for southeastern Louisiana. Withdrawals from the Gonzales-New Orleans aquifer in Jefferson and Orleans Parishes totaled about 33 million gallons per day in 1990, most of which was used for power generation and industrial purposes. Ground-water flow in the Gonzales-New Orleans aquifer within the study area is toward the center of a cone of depression in the potentiometric surface located just northeast of downtown New Orleans. The cone of depression has formed due to large withdrawals from the aquifer. During the spring of 1993, the altitude of water levels in the Gonzales-New Orleans aquifer within the study area ranged from about 100 feet below sea level in Orleans Parish, to about 11 feet below sea level in St. John the Baptist Parish. Water-level changes in the aquifer during the period 1987-93 ranged from little or no change in some areas, to a recovery of more than 15 feet in eastern Jefferson and western Orleans Parishes near Lake Pontchartrain. Water-level changes within the Gonzales-New Orleans aquifer are primarily related to changes in pumping.

The interaction of Clostridium perfringens enterotoxin with receptor claudins

PubMed Central

Shrestha, Archana; Uzal, Francisco A.; McClane, Bruce A.

2016-01-01

Clostridium perfringens enterotoxin (CPE) has significant medical importance due to its involvement in several common human gastrointestinal diseases. This 35 kDa single polypeptide toxin consists of two domains: a C-terminal domain involved in receptor binding and an N-terminal domain involved in oligomerization, membrane insertion and pore formation. The action of CPE starts with its binding to receptors, which include certain members of the claudin tight junction protein family; bound CPE then forms a series of complexes, one of which is a pore that causes the calcium influx responsible for host cell death. Recent studies have revealed that CPE binding to claudin receptors involves interactions between the C-terminal CPE domain and both the 1st and 2nd extracellular loops (ECL-1 and ECL-2) of claudin receptors. Of particular importance for this binding is the docking of ECL-2 into a pocket present in the C-terminal domain of the toxin. This increased understanding of CPE interactions with claudin receptors is now fostering the development of receptor decoy therapeutics for CPE-mediated gastrointestinal disease, reagents for cancer therapy/diagnoses and enhancers of drug delivery. PMID:27090847

Sac1--Vps74 structure reveals a mechanism to terminate phosphoinositide signaling in the Golgi apparatus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cai, Yiying; Deng, Yongqiang; Horenkamp, Florian

2014-08-25

Sac1 is a phosphoinositide phosphatase of the endoplasmic reticulum and Golgi apparatus that controls organelle membrane composition principally via regulation of phosphatidylinositol 4-phosphate signaling. We present a characterization of the structure of the N-terminal portion of yeast Sac1, containing the conserved Sac1 homology domain, in complex with Vps74, a phosphatidylinositol 4-kinase effector and the orthologue of human GOLPH3. The interface involves the N-terminal subdomain of the Sac1 homology domain, within which mutations in the related Sac3/Fig4 phosphatase have been linked to Charcot–Marie–Tooth disorder CMT4J and amyotrophic lateral sclerosis. Disruption of the Sac1–Vps74 interface results in a broader distribution of phosphatidylinositolmore » 4-phosphate within the Golgi apparatus and failure to maintain residence of a medial Golgi mannosyltransferase. The analysis prompts a revision of the membrane-docking mechanism for GOLPH3 family proteins and reveals how an effector of phosphoinositide signaling serves a dual function in signal termination.« less

Role of Crk Adaptor Proteins in Cellular Migration and Invasion in Human Breast Cancer

DTIC Science & Technology

2007-03-01

nucleus. To confirm the staining is indeed specific, another antibody specific for CrkII is being tested. Furthermore, cytoplasmic and nuclear...the endogenous CrkL binding partner, Gab1 , which is enhanced upon HGF stimulation (Appendix 16). One final experiment, showing that the CrkLV5 tag...receptor tyrosine kinases, and a docking protein Gab1 , involved in epithelial dispersal and morphogenesis (5, 11, 12). The NH2-terminal SH3 domain of

Heterodimerization of the Entamoeba histolytica EhCPADH virulence complex through molecular dynamics and protein-protein docking.

PubMed

Montaño, Sarita; Orozco, Esther; Correa-Basurto, José; Bello, Martiniano; Chávez-Munguía, Bibiana; Betanzos, Abigail

2017-02-01

EhCPADH is a protein complex involved in the virulence of Entamoeba histolytica, the protozoan responsible for human amebiasis. It is formed by the EhCP112 cysteine protease and the EhADH adhesin. To explore the molecular basis of the complex formation, three-dimensional models were built for both proteins and molecular dynamics simulations (MDS) and docking calculations were performed. Results predicted that the pEhCP112 proenzyme and the mEhCP112 mature enzyme were globular and peripheral membrane proteins. Interestingly, in pEhCP112, the propeptide appeared hiding the catalytic site (C167, H329, N348); while in mEhCP112, this site was exposed and its residues were found structurally closer than in pEhCP112. EhADH emerged as an extended peripheral membrane protein with high fluctuation in Bro1 and V shape domains. 500 ns-long MDS and protein-protein docking predictions evidenced different heterodimeric complexes with the lowest free energy. pEhCP112 interacted with EhADH by the propeptide and C-terminal regions and mEhCP112 by the C-terminal through hydrogen bonds. In contrast, EhADH bound to mEhCP112 by 442-479 residues, adjacent to the target cell-adherence region (480-600 residues), and by the Bro1 domain (9-349 residues). Calculations of the effective binding free energy and per residue free energy decomposition showed that EhADH binds to mEhCP112 with a higher binding energy than to pEhCP112, mainly through van der Waals interactions and the nonpolar part of solvation energy. The EhADH and EhCP112 structural relationship was validated in trophozoites by immunofluorescence, TEM, and immunoprecipitation assays. Experimental findings fair agreed with in silico results.

Charter and Direct Run Schools of the Recovery School District (RSD) and Orleans Parish School Board (OPSB) Comparison of High Stakes Tests and Dropout Rates

ERIC Educational Resources Information Center

Andry, Beverly Guillory

2011-01-01

The city of New Orleans has embarked on an historic experiment reinventing its schools--once considered among the worst in the country--from a centralized, single district model of education to a two district model in which both the Recovery School District (RSD) and the preexisting Orleans Parish School Board (OPSB) both operate direct run and…

Survey Analysis of Military Parishes: The Wright-Patterson AFB Catholic Parish Example.

DTIC Science & Technology

1980-08-01

had scores which varied from mass to mass--sense of prayerfulness, singing, sense of community, and performance of guitar group--shown in Table 14. 17...significance is that the 1980 ratings were better than the 1978 ratings for all liturgy planning areas. An overall average liturgy planning score was...calculated for each indi- vidual who rated any of the topics. Those scores indicate generally positive perceptions of the liturgies. Eighty-six

Prioritization of Louisiana Parishes based on Industrial Releases of Known or Suspected Carcinogens.

PubMed

Katner, Adrienne

2015-01-01

This investigation evaluated the geographic distribution of carcinogen releases by Louisiana industries to prioritize areas for regulatory oversight, research and monitoring, and to promote clinician awareness and vigilance. Data on estimated industry releases for the period between 1996 and 2011 were obtained from the US Environmental Protection Agency's Toxics Release Inventory. Chemicals associated with cancers of the prostate, lung, bladder, kidney, breast and non-Hodgkin lymphoma were identified. The Risk Screening Environmental Indicators model was used to derive measures or model scores based on chemical toxicity, fate and transport, and population characteristics. Parishes, chemicals, industries and media generating the highest model scores were identified. Parishes with the highest model scores were East Baton Rouge, Calcasieu, Caddo and St. John the Baptist. Clinicians should carefully monitor cancer cases in these areas, and if patients reside near or work in industry, an occupational and environmental history should be considered.

Virtual screening and pharmacophore studies for ftase inhibitors using Indian plant anticancer compounds database.

PubMed

Khan, Abdul Hafeez; Prakash, Alok; Kumar, Dinesh; Rawat, Anil Kumar; Srivastava, Rajeev; Srivastava, Shipra

2010-07-06

Farnesyl transferase (FTase) is an enzyme responsible for post-translational modification in proteins having a carboxy-terminal CaaX motif in human. It catalyzes the attachment of a lipid group in proteins of RAS superfamily, which is essential in signal transduction. FTase has been recognized as an important target for anti cancer therapeutics. In this work, we performed virtual screening against FTase with entire 125 compounds from Indian Plant Anticancer Database using AutoDock 3.0.5 software. All compounds were docked within binding pocket containing Lys164, Tyr300, His248 and Tyr361 residues in crystal structure of FTase. These complexes were ranked according to their docking score, using methodology that was shown to achieve maximum accuracy. Finally we got three potent compounds with the best Autodock docking Score (Vinorelbine: -21.28 Kcal/mol, Vincristine: -21.74 Kcal/mol and Vinblastine: -22.14 Kcal/mol) and their energy scores were better than the FTase bound co-crystallized ligand (L- 739: -7.9 kcal/mol). These three compounds belong to Vinca alkaloids were analyzed through Python Molecular Viewer for their interaction studies. It predicted similar orientation and binding modes for these compounds with L-739 in FTase.Thus from the complex scoring and binding ability it is concluded that these Vinca alkaloids could be promising inhibitors for FTase. A 2-D pharmacophore was generated for these alkaloids using LigandScout to confirm it. A shared feature pharmacophore was also constructed that shows four common features (one hydogen bond Donar, Two hydrogen bond Acceptor and one ionizable area) help compounds to interact with this enzyme.

Non-nucleosidic inhibition of Herpes simplex virus DNA polymerase: mechanistic insights into the anti-herpetic mode of action of herbal drug withaferin A.

PubMed

Grover, Abhinav; Agrawal, Vibhuti; Shandilya, Ashutosh; Bisaria, Virendra S; Sundar, Durai

2011-01-01

Herpes Simplex Virus 1 and 2 causes several infections in humans including cold sores and encephalitis. Previous antiviral studies on herpes viruses have focussed on developing nucleoside analogues that can inhibit viral polymerase and terminate the replicating viral DNA. However, these drugs bear an intrinsic non-specificity as they can also inhibit cellular polymerase apart from the viral one. The present study is an attempt to elucidate the action mechanism of naturally occurring withaferin A in inhibiting viral DNA polymerase, thus providing an evidence for its development as a novel anti-herpetic drug. Withaferin A was found to bind very similarly to that of the previously reported 4-oxo-DHQ inhibitor. Withaferin A was observed binding to the residues Gln 617, Gln 618, Asn 815 and Tyr 818, all of which are crucial to the proper functioning of the polymerase. A comparison of the conformation obtained from docking and the molecular dynamics simulations shows that substantial changes in the binding conformations have occurred. These results indicate that the initial receptor-ligand interaction observed after docking can be limited due to the receptor rigid docking algorithm and that the conformations and interactions observed after simulation runs are more energetically favoured. We have performed docking and molecular dynamics simulation studies to elucidate the binding mechanism of prospective herbal drug withaferin A onto the structure of DNA polymerase of Herpes simplex virus. Our docking simulations results give high binding affinity of the ligand to the receptor. Long de novo MD simulations for 10 ns performed allowed us to evaluate the dynamic behaviour of the system studied and corroborate the docking results, as well as identify key residues in the enzyme-inhibitor interactions. The present MD simulations support the hypothesis that withaferin A is a potential ligand to target/inhibit DNA polymerase of the Herpes simplex virus. Results of these studies will also guide the design of selective inhibitors of DNA POL with high specificity and potent activity in order to strengthen the therapeutic arsenal available today against the dangerous biological warfare agent represented by Herpes Simplex Virus.

Non-nucleosidic inhibition of Herpes simplex virus DNA polymerase: mechanistic insights into the anti-herpetic mode of action of herbal drug withaferin A

PubMed Central

2011-01-01

Background Herpes Simplex Virus 1 and 2 causes several infections in humans including cold sores and encephalitis. Previous antiviral studies on herpes viruses have focussed on developing nucleoside analogues that can inhibit viral polymerase and terminate the replicating viral DNA. However, these drugs bear an intrinsic non-specificity as they can also inhibit cellular polymerase apart from the viral one. The present study is an attempt to elucidate the action mechanism of naturally occurring withaferin A in inhibiting viral DNA polymerase, thus providing an evidence for its development as a novel anti-herpetic drug. Results Withaferin A was found to bind very similarly to that of the previously reported 4-oxo-DHQ inhibitor. Withaferin A was observed binding to the residues Gln 617, Gln 618, Asn 815 and Tyr 818, all of which are crucial to the proper functioning of the polymerase. A comparison of the conformation obtained from docking and the molecular dynamics simulations shows that substantial changes in the binding conformations have occurred. These results indicate that the initial receptor-ligand interaction observed after docking can be limited due to the receptor rigid docking algorithm and that the conformations and interactions observed after simulation runs are more energetically favoured. Conclusions We have performed docking and molecular dynamics simulation studies to elucidate the binding mechanism of prospective herbal drug withaferin A onto the structure of DNA polymerase of Herpes simplex virus. Our docking simulations results give high binding affinity of the ligand to the receptor. Long de novo MD simulations for 10 ns performed allowed us to evaluate the dynamic behaviour of the system studied and corroborate the docking results, as well as identify key residues in the enzyme-inhibitor interactions. The present MD simulations support the hypothesis that withaferin A is a potential ligand to target/inhibit DNA polymerase of the Herpes simplex virus. Results of these studies will also guide the design of selective inhibitors of DNA POL with high specificity and potent activity in order to strengthen the therapeutic arsenal available today against the dangerous biological warfare agent represented by Herpes Simplex Virus. PMID:22373101

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

Kongsberg Engineering a.s. has developed an oil loading system for the Central North Sea, in 492-ft waters, which is not permanent, is safer, economical and withstands the environmental forces in the area. The ''Subload'' system is based on loading directly from a seafloor terminal to two 78,000 dwt dynamically positioned shuttle tankers. Upon arrival at the field, a shuttle tanker fitted with an SPM loading yoke and a riser reel deploys a 16-in. flexible riser attached to a lower riser package fitted with thrusters. Controlled by signals from a special high-accuracy underwater maneuver the lower riser end into docking positionmore » with the seafloor terminal. The terminal is located at the end of a two-km, 28-in. pipe line from the production platform. Presentation of the system, the company said that the diverless hookup procedure between the intrument-controlled riser connection and the subsea wellhead requires 45 minutes. The shuttle tanker loading could be completed twice a day in seven and a half hours per operation.« less

Munc18-1-regulated stage-wise SNARE assembly underlying synaptic exocytosis.

PubMed

Ma, Lu; Rebane, Aleksander A; Yang, Guangcan; Xi, Zhiqun; Kang, Yuhao; Gao, Ying; Zhang, Yongli

2015-12-23

Synaptic-soluble N-ethylmaleimide-sensitive factor attachment receptor (SNARE) proteins couple their stage-wise folding/assembly to rapid exocytosis of neurotransmitters in a Munc18-1-dependent manner. The functions of the different assembly stages in exocytosis and the role of Munc18-1 in SNARE assembly are not well understood. Using optical tweezers, we observed four distinct stages of assembly in SNARE N-terminal, middle, C-terminal, and linker domains (or NTD, MD, CTD, and LD, respectively). We found that SNARE layer mutations differentially affect SNARE assembly. Comparison of their effects on SNARE assembly and on exocytosis reveals that NTD and CTD are responsible for vesicle docking and fusion, respectively, whereas MD regulates SNARE assembly and fusion. Munc18-1 initiates SNARE assembly and structures t-SNARE C-terminus independent of syntaxin N-terminal regulatory domain (NRD) and stabilizes the half-zippered SNARE complex dependent upon the NRD. Our observations demonstrate distinct functions of SNARE domains whose assembly is intimately chaperoned by Munc18-1.

Uptake of atrial fibrillation screening aiming at stroke prevention: geo-mapping of target population and non-participation.

PubMed

Engdahl, Johan; Holmén, Anders; Rosenqvist, Mårten; Strömberg, Ulf

2013-08-03

In a screening study for silent atrial fibrillation (AF), which is a frequent source of cardiac emboli with ischemic stroke, the proportion of non-participants was considerable and their clinical profile differed from the participants' profile. We intended to geo-map the target population and non-participation in an attempt to understand factors related to screening uptake and, thereby, obtain useful information needed to intervene for improved uptake. In the municipality of Halmstad, Sweden, all residents born in 1934-1935 were invited to the screening study during April 2010 to February 2012. The total study group included 848 participants and 367 non-participants from 12 parishes. Geo-maps displaying participation, along with target-population-based geo-maps displaying proportion of immigrants and ischemic stroke incidence, were used. Smoothed non-participation ratios (SmNPR) varied from 0.81 to 1.24 across different parishes (SmNRP=1 corresponds to the expected participation based on the total study group). Among high risk individuals, the geographical variation was more pronounced (SmNPR range 0.75-1.51). Two parishes with higher share of immigrants and elevated population-based ischemic stroke incidence showed markedly lower participation, particularly among high-risk individuals. AF screening uptake varied evidently between parishes, particularly among high-risk individuals. Geo-mapping of target population and non-participation yielded useful information needed to intervene for improved screening uptake.

Influences on Adaptive Planning to Reduce Flood Risks among Parishes in South Louisiana.

PubMed

Paille, Mary; Reams, Margaret; Argote, Jennifer; Lam, Nina S-N; Kirby, Ryan

2016-02-01

Residents of south Louisiana face a range of increasing, climate-related flood exposure risks that could be reduced through local floodplain management and hazard mitigation planning. A major incentive for community planning to reduce exposure to flood risks is offered by the Community Rating System (CRS) of the National Flood Insurance Program (NFIP). The NFIP encourages local collective action by offering reduced flood insurance premiums for individual policy holders of communities where suggested risk-reducing measures have been implemented. This preliminary analysis examines the extent to which parishes (counties) in southern Louisiana have implemented the suggested policy actions and identifies key factors that account for variation in the implementation of the measures. More measures implemented results in higher CRS scores. Potential influences on scores include socioeconomic attributes of residents, government capacity, average elevation and past flood events. The results of multiple regression analysis indicate that higher CRS scores are associated most closely with higher median housing values. Furthermore, higher scores are found in parishes with more local municipalities that participate in the CRS program. The number of floods in the last five years and the revenue base of the parish does not appear to influence CRS scores. The results shed light on the conditions under which local adaptive planning to mitigate increasing flood risks is more likely to be implemented and offer insights for program administrators, researchers and community stakeholders.

Influences on Adaptive Planning to Reduce Flood Risks among Parishes in South Louisiana

PubMed Central

Paille, Mary; Reams, Margaret; Argote, Jennifer; Lam, Nina S.-N.; Kirby, Ryan

2016-01-01

Residents of south Louisiana face a range of increasing, climate-related flood exposure risks that could be reduced through local floodplain management and hazard mitigation planning. A major incentive for community planning to reduce exposure to flood risks is offered by the Community Rating System (CRS) of the National Flood Insurance Program (NFIP). The NFIP encourages local collective action by offering reduced flood insurance premiums for individual policy holders of communities where suggested risk-reducing measures have been implemented. This preliminary analysis examines the extent to which parishes (counties) in southern Louisiana have implemented the suggested policy actions and identifies key factors that account for variation in the implementation of the measures. More measures implemented results in higher CRS scores. Potential influences on scores include socioeconomic attributes of residents, government capacity, average elevation and past flood events. The results of multiple regression analysis indicate that higher CRS scores are associated most closely with higher median housing values. Furthermore, higher scores are found in parishes with more local municipalities that participate in the CRS program. The number of floods in the last five years and the revenue base of the parish does not appear to influence CRS scores. The results shed light on the conditions under which local adaptive planning to mitigate increasing flood risks is more likely to be implemented and offer insights for program administrators, researchers and community stakeholders. PMID:27330828

Underwater Docking of Autonomous Undersea Vehicles Using Optical Terminal Guidance

DTIC Science & Technology

1997-10-01

simply using a brighter beacon. Scattered light within the field-of-view is imaged almost equally into each of the four quadrants of a photodetector...received by adjacent quadrants a great deal of the forward scattered light can be rejected when the signals from the four quadrants are subsequently...employed to aim the nose of the vehicle at the light source because the illumination is equal in all four quadrants only when the tracker’s optical axis is

KSC-02PD0341

NASA Image and Video Library

2002-03-20

KENNEDY SPACE CENTER, FLA. -- STS-110 Commander Michael Bloomfield waves as he gets ready to depart KSC for Houston. He and the rest of the crew were at KSC for Terminal Countdown Demonstration Test activities that included payload familiarization and a simulated launch countdown. Scheduled for launch April 4, the 11-day STS-110 mission will feature Space Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet

Practical solutions for reducing container ships' waiting times at ports using simulation model

NASA Astrophysics Data System (ADS)

Sheikholeslami, Abdorreza; Ilati, Gholamreza; Yeganeh, Yones Eftekhari

2013-12-01

The main challenge for container ports is the planning required for berthing container ships while docked in port. Growth of containerization is creating problems for ports and container terminals as they reach their capacity limits of various resources which increasingly leads to traffic and port congestion. Good planning and management of container terminal operations reduces waiting time for liner ships. Reducing the waiting time improves the terminal's productivity and decreases the port difficulties. Two important keys to reducing waiting time with berth allocation are determining suitable access channel depths and increasing the number of berths which in this paper are studied and analyzed as practical solutions. Simulation based analysis is the only way to understand how various resources interact with each other and how they are affected in the berthing time of ships. We used the Enterprise Dynamics software to produce simulation models due to the complexity and nature of the problems. We further present case study for berth allocation simulation of the biggest container terminal in Iran and the optimum access channel depth and the number of berths are obtained from simulation results. The results show a significant reduction in the waiting time for container ships and can be useful for major functions in operations and development of container ship terminals.

Cultural Resources Survey of the Angelina Revetment Item, St. James Parish, Louisiana.

DTIC Science & Technology

1986-10-22

Corps G) of Engineers O New Oreans Dist 0 N In CULTURAL RESOURCES SURVEY OF THE ANGELINA REVETMENT ITEM, ST. JAMES . PARISH, LOUISIANA. FINAL REPORT...PD-86/0 3 AF Go 4. TITLE (ad S-belde) S. TYPE OF REPORT & PENIOO COVERED Cultural Resources Survey of the Final Angelina Revetment Item, St. James...the Angelina Revetment Item, adjacent to the Mississippi River channel, during August and September, 1985. b-The area was settled during the Spanish

Cultural Resources Survey and Archeological Inventory of the Proposed Carrollton Revetment Project, Orleans Parish, Louisiana, Phase 1. Volume 1 of 2

DTIC Science & Technology

2004-11-01

included hematite and ized by seasonal and specialized adaptations to magnetite plummets, atlatl weights, and gorgets. marsh environments. Bayou Jasmine ...This phase, named after the Bayou Jasmine site Very little subsistence information has been (16SJB2) in St. John the Baptist Parish, is typi... Jasmine sites (16MA47) unequivocally indicates a hunting and include small animals, such as muskrats, birds, foraging economy (Jackson 1986; 1991). Spe

Vapor Pressure of GB

DTIC Science & Technology

2009-04-01

equation. The Podoll and Parish low temperature measured vapor pressure data (-35 and -25 °C) were included in our analysis . Penski summarized the...existing literature data for GB in his 1994 data review and analysis .6 He did not include the 0 °C Podoll and Parish measured vapor pressure data point...35.9 Pa) in his analysis because the error associated with this point was Ŗ to 10 times greater than the other values". He did not include the -10 °C

Feasibility Study of Quantitative Erosion Models for Use by the Federal Emergency Management Agency in the Prediction of Coastal Flooding.

DTIC Science & Technology

1987-06-01

Terrebonne Parish, La. Erosional 4 II Terrebonne-Jefferson Parishes, La. Erosional 5 111 Mississippi river delta front, La. Marsh/mud coast 6 I Chandeleur ...response along the transgressive Chandeleur barrier island arc southeast of the Mississippi Delta plain is variable because of local dif- ferences in...storms are the primary agents causing erosion and migration of this barrier arc. Frederic’s greatest impact was in the duneless southern Chandeleurs

A Cultural Resources Survey of the St. Charles Parish Hurricane Protection Levee, St. Charles Parish, Louisiana

DTIC Science & Technology

1988-09-01

Environments, Inc. kDEC 2 1198 8 1260 Main Street Baton Rouge, Louisiana 70802 H Prepared for U.S. Army Corps of Engineers New Orleans District P.O. Box 60267...Geological interpretations were developed by Charles Pearson with the assistance of Sherwood Gagliano. Figures for the report were prepared by...November 1987. Analysis of the collected data and report preparation took place in December 1987 and January 1988. Although the hurricane protection levee

Archaeological Evaluation of the Paris Road Site (16 or 41), Orleans Parish, Louisiana.

DTIC Science & Technology

1984-03-01

Little Woods middens (16 OR 1 to 16 OR 5) " located northwest of the study area. Unfortunately, the records and most of the artifacts have been lost (Ford...the Little Woods and Big Oak Island (16 OR 6) sites in Orleans Parish led to -’. a definition of Tchefuncte material culture. Shenkel’s 1972 to 1974...the Little Woods Middens (16 OR 1-5) situated along the south shore of Lake Pontchartrain. Unfortunately, Czajkowski’s notes and artifact records

Cultural Resources Survey of Mile 306.3 to 293.4-R on the Mississippi River, Concordia, Pointe Coupee and West Feliciana Parishes, Louisiana

DTIC Science & Technology

1993-01-01

from Cairo, Illinois to an arbitrary location upstream of the Gulf of Mexico where the delta plain originates . Specifically, the proposed project area...dominated by sediment of Mississippi River alluvial origin . In the northern part of Pointe Coupee Parish, the sediment deposited by the Red or Arkansas...North America. Domesticated cultigens, pottery making, and mound building are recognized as characteristics that suggest increased populations, social

Goal clarity as an instrument for improved organizational wellbeing in the Church of Sweden.

PubMed

Hansson, Ann-Sophie; Anderzén, Ingrid

2009-01-01

Lack of goal clarity is known to have negative effects on organizational as well as individual wellbeing. This study assesses effects of goal clarity on organizational wellbeing in the Church of Sweden. Data was based on questionnaires from a random sample of 501 parishes and 1002 individuals from the upper parish management. The response rate was 62%. The results showed significantly more positive experiences of effects of goal clarity on organizational wellbeing for those having former experience with of this type of work and among those representing larger parishes. Older employees reported a higher degree of engagement in the work while younger employees expressed a higher degree of influence. The results suggest that work with goal clarity has a positive impact on organizational wellbeing, which in turn is expected to have positive effects on employee wellbeing. Further research is required to examine the relationships between goal clarity work and organizational as well as individual wellbeing.

Video-Guidance Design for the DART Rendezvous Mission

NASA Technical Reports Server (NTRS)

Ruth, Michael; Tracy, Chisholm

2004-01-01

NASA's Demonstration of Autonomous Rendezvous Technology (DART) mission will validate a number of different guidance technologies, including state-differenced GPS transfers and close-approach video guidance. The video guidance for DART will employ NASA/Marshall s Advanced Video Guidance Sensor (AVGS). This paper focuses on the terminal phase of the DART mission that includes close-approach maneuvers under AVGS guidance. The closed-loop video guidance design for DART is driven by a number of competing requirements, including a need for maximizing tracking bandwidths while coping with measurement noise and the need to minimize RCS firings. A range of different strategies for attitude control and docking guidance have been considered for the DART mission, and design decisions are driven by a goal of minimizing both the design complexity and the effects of video guidance lags. The DART design employs an indirect docking approach, in which the guidance position targets are defined using relative attitude information. Flight simulation results have proven the effectiveness of the video guidance design.

STS-84 crew members in M-113 armored carrier for TCDT

NASA Technical Reports Server (NTRS)

1997-01-01

STS-84 crew members ride in and learn how to operate an M-113 armored personnel carrier as part of the Terminal Countdown Demonstration Test (TCDT) activities. Seated inside the M-113, from left, are Mission Specialist Jean-Francois Clervoy, Pilot Eileen Marie Collins (waving) and Commander Charles J. Precourt, in front. George Hoggard, a training officer with KSC Fire Services, sits on top of the personnel carrier. STS-84 aboard the Space Shuttle Atlantis will be the sixth docking of the Space Shuttle with the Russian Space Station Mir. After docking, STS-84 Mission Specialist C. Michael Foale will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff.

Results of prototype software development for automation of shuttle proximity operations

NASA Technical Reports Server (NTRS)

Hiers, Harry K.; Olszewski, Oscar W.

1991-01-01

A Rendezvous Expert System (REX) was implemented on a Symbolics 3650 processor and integrated with the 6 DOF, high fidelity Systems Engineering Simulator (SES) at the NASA Johnson Space Center in Houston, Texas. The project goals were to automate the terminal phase of a shuttle rendezvous, normally flown manually by the crew, and proceed automatically to docking with the Space Station Freedom (SSF). The project goals were successfully demonstrated to various flight crew members, managers, and engineers in the technical community at JSC. The project was funded by NASA's Office of Space Flight, Advanced Program Development Division. Because of the complexity of the task, the REX development was divided into two distinct efforts. One to handle the guidance and control function using perfect navigation data, and another to provide the required visuals for the system management functions needed to give visibility to the crew members of the progress being made towards docking the shuttle with the LVLH stabilized SSF.

Single-Pixel Optical Fluctuation Analysis of Calcium Channel Function in Active Zones of Motor Nerve Terminals

PubMed Central

Luo, Fujun; Dittrich, Markus; Stiles, Joel R.; Meriney, Stephen D.

2011-01-01

We used high-resolution fluorescence imaging and single-pixel optical fluctuation analysis to estimate the opening probability of individual voltage-gated calcium (Ca2+) channels during an action potential and the number of such Ca2+ channels within active zones of frog neuromuscular junctions. Analysis revealed ~36 Ca2+ channels within each active zone, similar to the number of docked synaptic vesicles but far less than the total number of transmembrane particles reported based on freeze-fracture analysis (~200–250). The probability that each channel opened during an action potential was only ~0.2. These results suggest why each active zone averages only one quantal release event during every other action potential, despite a substantial number of docked vesicles. With sparse Ca2+ channels and low opening probability, triggering of fusion for each vesicle is primarily controlled by Ca2+ influx through individual Ca2+ channels. In contrast, the entire synapse is highly reliable because it contains hundreds of active zones. PMID:21813687

KSC-75PC-0330

NASA Image and Video Library

1975-07-03

CAPE CANAVERAL, Fla. – ASTP prime crewmen Donald Slayton, Thomas Stafford and Vance Brand pose with their Saturn IB launch vehicle following the Countdown Demonstration Test [CDDT], a step-by-step dress rehearsal for their July 15 launch. During the “wet” portion of the test, conducted yesterday, the stages of the launch vehicle were fueled as they will be on launch day. The fuels were off loaded and the terminal portion of the count repeated today with the astronauts aboard the vehicle. The first international crewed spaceflight was a joint U.S.-U.S.S.R. rendezvous and docking mission. The Apollo-Soyuz Test Project, or ASTP, took its name from the spacecraft employed: the American Apollo and the Soviet Soyuz. The three-man Apollo crew lifted off from Kennedy Space Center aboard a Saturn IB rocket on July 15, 1975, to link up with the Soyuz that had launched a few hours earlier. A cylindrical docking module served as an airlock between the two spacecraft for transfer of the crew members. Photo credit: NASA

Assessing the Relationship Between Mental Distress and Tobacco Use in Post-Katrina and Rita Louisiana.

PubMed

Mukherjee, Snigdha; Canterberry, Melanie; Yore, Jennifer B; Ledford, Edward Cannon; Carton, Thomas W

2017-08-24

The relationship between mental health status and smoking is complicated and often confounded by bi-directionality, yet most research on this relationship assumes exogeneity. The goal of this article is to implement an instrumental variable approach to (1) test the exogeneity assumption and (2) report on the association between mental health status and smoking post-disaster. This analysis utilizes the 2006 and 2007 Louisiana Behavioral Risk Factor Surveillance Survey to examine the link between mental distress and smoking in areas affected by Hurricanes Katrina and Rita. Residence in a hurricane-affected parish (county) was used as an instrumental variable for mental distress. Just over 22% of the sample resided in a hurricane-affected parish. Residents of hurricane-affected parishes were significantly more likely to report occasional and frequent mental distress. Residence in a hurricane-affected parish was not significantly associated with smoking status. With residence established as a salient instrumental variable for mental distress, the exogeneity assumption was tested and confirmed in this sample. A dose-response relationship existed between mental distress and smoking, with smoking prevalence increasing directly (and non-linearly) with mental distress. In this sample, the relationship between mental distress and smoking status was exogenous and followed a dose-response relationship, suggesting that the disasters did not result in an uptake of smoking initiation, but that the higher amounts of mental distress may lead to increased use among smokers. The findings suggest that tobacco control programs should devise unique strategies to address mentally distressed populations.

NMR Model of PrgI-SipD Interaction and its Implications in the Needle-Tip Assembly of the Salmonella Type III Secretion System

PubMed Central

Rathinavelan, Thenmalarchelvi; Lara-Tejero, Maria; Lefebre, Matthew; Chatterjee, Srirupa; McShan, Andrew C.; Guo, Da-Chuan; Tang, Chun; Galan, Jorge E.; De Guzman, Roberto N.

2014-01-01

Salmonella and other pathogenic bacteria use the type III secretion system (T3SS) to inject virulence proteins into human cells to initiate infections. The structural component of the T3SS contains a needle and a needle tip. The needle is assembled from PrgI needle protomers and the needle tip is capped with several copies of the SipD tip protein. How a tip protein docks on the needle is unclear. A crystal structure of a PrgI-SipD fusion protein docked on the PrgI needle results in steric clash of SipD at the needle tip when modeled on the recent atomic structure of the needle. Thus, there is currently no good model of how SipD is docked on the PrgI needle tip. Previously, we showed by NMR paramagnetic relaxation enhancement (PRE) methods that a specific region in the SipD coiled-coil is the binding site for PrgI. Others have hypothesized that a domain of the tip protein – the N-terminal α-helical hairpin, has to swing away during the assembly of the needle apparatus. Here, we show by PRE methods that a truncated form of SipD lacking the α-helical hairpin domain binds more tightly to PrgI. Further, PRE-based structure calculations revealed multiple PrgI binding sites on the SipD coiled-coil. Our PRE results together with the recent NMR-derived atomic structure of the Salmonella needle suggest a possible model of how SipD might dock at the PrgI needle tip. SipD and PrgI are conserved in other bacterial T3SSs, thus our results have wider implication in understanding other needle-tip complexes. PMID:24951833

Interactions of 2-phenyl-benzotriazole xenobiotic compounds with human Cytochrome P450-CYP1A1 by means of docking, molecular dynamics simulations and MM-GBSA calculations.

PubMed

Mena-Ulecia, Karel; MacLeod-Carey, Desmond

2018-06-01

2-phenyl-benzotriazole xenobiotic compounds (PBTA-4, PBTA-6, PBTA-7 and PBTA-8) that were previously isolated and identified in waters of the Yodo river, in Japan (Nukaya et al., 2001; Ohe et al., 2004; Watanabe et al., 2001) were characterized as powerful pro-mutagens. In order to predict the activation mechanism of these pro-mutagens, we designed a computational biochemistry protocol, which includes, docking experiments, molecular dynamics simulations and free energy decomposition calculations to obtain information about the interaction of 2-phenyl-benzotriazole molecules into the active center of cytochrome P450-CYP1A1 (CYP1A1). Molecular docking calculations using AutoDock Vina software shows that PBTAs are proportionally oriented in the pocket of CYP1A1, establishing π-π stacking attractive interactions between the triazole group and the Phe224, as well as, the hydrogen bonds of the terminal NH 2 over the benzotriazole units with the Asn255 and Ser116 amino acids. Molecular dynamics simulations using NAMD package showed that these interactions are stable along 100.0 ns of trajectories. Into this context, free binding energy calculations employing the MM-GBSA approach, shows that some differences exists among the interaction of PBTAs with CYP1A1, regarding the solvation, electrostatic and van der Waals interaction energy components. These results suggest that PBTA molecules might be activated by CYP1A1. Thus, enhancing their mutagenicity when compared with the pro-mutagen parent species. Copyright © 2018 Elsevier Ltd. All rights reserved.

A nuclear powered air cushion freighter for the 1980's.

NASA Technical Reports Server (NTRS)

Anderson, J. L.

1971-01-01

A design for a transoceanic, dry cargo-carrying freighter is suggested; its use and operation in port are discussed. With a gross weight of 4500 metric tons (5000 tons), more than 50 percent of which is cargo, it will cruise at 50 meters per second (100 knots) in waves 2.4 meters (8 ft) high. Its peripheral jet-flexible skirt air cushion concept and air thrustors will let the freighter go over waves 8 meters high at reduced velocity. Power comes from a 1280 megawatt, helium-cooled thermal reactor. It could dock at any major port in the world, but because it needs no surface contact, it could also travel inland to land-locked ports. A modular terminal design and methods of cargo transfer are suggested. The concept of cargo containerization influences both the freighter and terminal design.

Rickettsia prowazekii methionine aminopeptidase as a promising target for the development of antibacterial agents

DOE PAGES

Helgren, Travis R.; Chen, Congling; Wangtrakuldee, Phumvadee; ...

2016-11-10

Methionine aminopeptidase (MetAP) is a class of ubiquitous enzymes essential for the survival of numerous bacterial species. These enzymes are responsible for the cleavage of N-terminal formyl-methionine initiators from nascent proteins to initiate post-translational modifications that are often essential to proper protein function. Thus, inhibition of MetAP activity has been implicated as a novel antibacterial target. In this study, we tested this idea in the present study by targeting the MetAP enzyme in the obligate intracellular pathogen Rickettsia prowazekii. We first identified potent RpMetAP inhibitory species by employing an in vitro enzymatic activity assay. The molecular docking program AutoDock wasmore » then utilized to compare published crystal structures of inhibited MetAP species to docked poses of RpMetAP. Based on these in silico and in vitro screens, a subset of 17 compounds was tested for inhibition of R. prowazekii growth in a pulmonary vascular endothelial cell (EC) culture infection model system. All compounds were tested over concentration ranges that were determined to be non-toxic to the ECs and 8 of the 17 compounds displayed substantial inhibition of R. prowazekii growth. Lastly, these data highlight the therapeutic potential for inhibiting RpMetAP as a novel antimicrobial strategy and set the stage for future studies in pre-clinical animal models of infection.« less

Rickettsia prowazekii methionine aminopeptidase as a promising target for the development of antibacterial agents

DOE Office of Scientific and Technical Information (OSTI.GOV)

Helgren, Travis R.; Chen, Congling; Wangtrakuldee, Phumvadee

Methionine aminopeptidase (MetAP) is a class of ubiquitous enzymes essential for the survival of numerous bacterial species. These enzymes are responsible for the cleavage of N-terminal formyl-methionine initiators from nascent proteins to initiate post-translational modifications that are often essential to proper protein function. Thus, inhibition of MetAP activity has been implicated as a novel antibacterial target. In this study, we tested this idea in the present study by targeting the MetAP enzyme in the obligate intracellular pathogen Rickettsia prowazekii. We first identified potent RpMetAP inhibitory species by employing an in vitro enzymatic activity assay. The molecular docking program AutoDock wasmore » then utilized to compare published crystal structures of inhibited MetAP species to docked poses of RpMetAP. Based on these in silico and in vitro screens, a subset of 17 compounds was tested for inhibition of R. prowazekii growth in a pulmonary vascular endothelial cell (EC) culture infection model system. All compounds were tested over concentration ranges that were determined to be non-toxic to the ECs and 8 of the 17 compounds displayed substantial inhibition of R. prowazekii growth. Lastly, these data highlight the therapeutic potential for inhibiting RpMetAP as a novel antimicrobial strategy and set the stage for future studies in pre-clinical animal models of infection.« less

Liprin-α3 controls vesicle docking and exocytosis at the active zone of hippocampal synapses.

PubMed

Wong, Man Yan; Liu, Changliang; Wang, Shan Shan H; Roquas, Aram C F; Fowler, Stephen C; Kaeser, Pascal S

2018-02-27

The presynaptic active zone provides sites for vesicle docking and release at central nervous synapses and is essential for speed and accuracy of synaptic transmission. Liprin-α binds to several active zone proteins, and loss-of-function studies in invertebrates established important roles for Liprin-α in neurodevelopment and active zone assembly. However, Liprin-α localization and functions in vertebrates have remained unclear. We used stimulated emission depletion superresolution microscopy to systematically determine the localization of Liprin-α2 and Liprin-α3, the two predominant Liprin-α proteins in the vertebrate brain, relative to other active-zone proteins. Both proteins were widely distributed in hippocampal nerve terminals, and Liprin-α3, but not Liprin-α2, had a prominent component that colocalized with the active-zone proteins Bassoon, RIM, Munc13, RIM-BP, and ELKS. To assess Liprin-α3 functions, we generated Liprin-α3-KO mice by using CRISPR/Cas9 gene editing. We found reduced synaptic vesicle tethering and docking in hippocampal neurons of Liprin-α3-KO mice, and synaptic vesicle exocytosis was impaired. Liprin-α3 KO also led to mild alterations in active zone structure, accompanied by translocation of Liprin-α2 to active zones. These findings establish important roles for Liprin-α3 in active-zone assembly and function, and suggest that interplay between various Liprin-α proteins controls their active-zone localization.

REACT Real-Time Emergency Action Coordination Tool

NASA Technical Reports Server (NTRS)

2004-01-01

Recently the Emergency Management Operations Center (EMOC) of St. Tammany Parish turned to the Technology Development and Transfer Office (TDTO) of NASA's Stennis Space Center (SSC) for help in combating the problems associated with water inundation. Working through a Dual-Use Development Agreement the Technology Development and Transfer Office, EMOC and a small geospatial applications company named Nvision provided the parish with a new front-line defense. REACT, Real-time Emergency Action coordination Tool is a decision support system that integrates disparate information to enable more efficient decision making by emergency management personnel.

Rice Agriculture in the River Parishes: The Historical Archeology of the Vacherie Site (16 SJ 40), St. James Parish, Louisiana

DTIC Science & Technology

1990-09-01

1893 and 1921 Mississippi River Commission Chart 72; ca. 1930s Caving Bank Survey Map; Mississippi River Hydrographic Survey Chart 41; and the U.S.G.S...of 1876-1893 and 1921 Mississippi River Commission Charts 72, the Caving Bank survey (ca. 1940s-1970s) map, the Mississippi River Hydrographic Survey... Chart (41), and the U.S.G.S. 7.5’ Lutcher, LA quadrangle, were used to examine patterns of erosion, stability, and bankline aggradation. The batture

STS-79 Commander Readdy and Pilot Wilcutt at slidewire

NASA Technical Reports Server (NTRS)

1996-01-01

Clad in their launch/entry suits, STS-79 Commander William F. Readdy (left) and Pilot Terrence W. Wilcutt test the fit of a slidewire basket on the emergency egress system at Launch Pad 39A. The six astronauts assigned to the fourth Shuttle-Mir docking flight are completing Terminal Countdown Demonstration Test (TCDT) activities. A dress rehearsal for launch, the TCDT includes emergency egress training at the launch pad and culminates with a simulated countdown. The Space Shuttle Atlantis is undergoing preparations for liftoff on STS-79 no earlier than Sept. 12.

STS-79 CREW COMMANDER WILLIAM F. READDY PREPARES TO ENTER ATLANTIS AT PAD 39A FOR TCDT

NASA Technical Reports Server (NTRS)

1996-01-01

At Launch Pad 39A, the astronauts assigned to Space Shuttle Mission STS-79 are wrapping up Terminal Countdown Demonstration Test (TCDT) activities with participation in a simulated countdown. Shown here in the white room of the Orbiter Access Arm is Commander William F. Readdy. Besides the realistic launch day preparation, the TCDT also includes emergency egress training at the pad. The Space Shuttle Atlantis is undergoing preparations for liftoff on the fourth Shuttle-Mir docking flight no earlier than Sept. 12.

KSC-02pd0303

NASA Image and Video Library

2002-03-18

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Jerry Ross waits his turn at driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. In the background, right, is Mission Specialist Lee Morin. TCDT includes emergency egress training and a simulated launch countdown, and is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet

STS-110 M.S. Smith suits up for TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Steven Smith relaxes during suit fit, which is part of Terminal Countdown Demonstration Test activities. The TCDT is held at KSC prior to each Space Shuttle flight to provide flight crews an opportunity to participate in simulated launch countdown activities. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Smith driving M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Steven Smith waits his turn at driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. TCDT includes emergency egress training and a simulated launch countdown, and is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

Concerted regulation of ISWI by an autoinhibitory domain and the H4 N-terminal tail

PubMed Central

Ludwigsen, Johanna; Pfennig, Sabrina; Singh, Ashish K; Schindler, Christina; Harrer, Nadine; Forné, Ignasi; Zacharias, Martin; Mueller-Planitz, Felix

2017-01-01

ISWI-family nucleosome remodeling enzymes need the histone H4 N-terminal tail to mobilize nucleosomes. Here we mapped the H4-tail binding pocket of ISWI. Surprisingly the binding site was adjacent to but not overlapping with the docking site of an auto-regulatory motif, AutoN, in the N-terminal region (NTR) of ISWI, indicating that AutoN does not act as a simple pseudosubstrate as suggested previously. Rather, AutoN cooperated with a hitherto uncharacterized motif, termed AcidicN, to confer H4-tail sensitivity and discriminate between DNA and nucleosomes. A third motif in the NTR, ppHSA, was functionally required in vivo and provided structural stability by clamping the NTR to Lobe 2 of the ATPase domain. This configuration is reminiscent of Chd1 even though Chd1 contains an unrelated NTR. Our results shed light on the intricate structural and functional regulation of ISWI by the NTR and uncover surprising parallels with Chd1. DOI: http://dx.doi.org/10.7554/eLife.21477.001 PMID:28109157

Purification and Characterization of Peptides Inhibiting MMP-1 Activity with C Terminate of Gly-Leu from Simulated Gastrointestinal Digestion Hydrolysates of Tilapia (Oreochromis niloticus) Skin Gelatin.

PubMed

Liping, Sun; Qiuming, Liu; Jian, Fan; Xiao, Li; Yongliang, Zhuang

2018-01-24

Tilapia skin gelatin hydrolysates (TSGHs) were prepared by simulated gastrointestinal digestion and separated by gel filtration and semi-preparative reversed-phase high-performance liquid chromatography. The anti-photoaging effects were evaluated using an ultraviolet radiation B (UVB)-induced mouse embryonic fibroblast (MEF) photoaging model in vitro. Three fractions from TSGHs with high inhibitory intercellular matrix metalloproteinase-1 (MMP-1) activities and reactive oxygen species (ROS) production were obtained. Three key peptides, GYTGL, LGATGL, and VLGL, were identified, and their C terminate was Gly-Leu. Three peptides were synthesized and exhibited a significant inhibition of intercellular MMP-1 activity and ROS production. Furthermore, three peptides inhibiting MMP-1 activities were evaluated through their docking of S 1 ' and S 3 ' active pockets of MMP-1. Hydrogen bonds and C terminate Gly-Leu played important roles. Finally, the protective effects of three peptides on intercellular collagen in UVB-induced MEFs were compared. Our results indicated that tilapia gelatin peptides exhibited potential activities to prevent and regulate photoaging.

Modeling, molecular dynamics, and docking assessment of transcription factor rho: a potential drug target in Brucella melitensis 16M

PubMed Central

Pradeepkiran, Jangampalli Adi; Kumar, Konidala Kranthi; Kumar, Yellapu Nanda; Bhaskar, Matcha

2015-01-01

The zoonotic disease brucellosis, a chronic condition in humans affecting renal and cardiac systems and causing osteoarthritis, is caused by Brucella, a genus of Gram-negative, facultative, intracellular pathogens. The mode of transmission and the virulence of the pathogens are still enigmatic. Transcription regulatory elements, such as rho proteins, play an important role in the termination of transcription and/or the selection of genes in Brucella. Adverse effects of the transcription inhibitors play a key role in the non-successive transcription challenges faced by the pathogens. In the investigation presented here, we computationally predicted the transcription termination factor rho (TtFRho) inhibitors against Brucella melitensis 16M via a structure-based method. In view the unknown nature of its crystal structure, we constructed a robust three-dimensional homology model of TtFRho’s structure by comparative modeling with the crystal structure of the Escherichia coli TtFRho (Protein Data Bank ID: 1PVO) as a template in MODELLER (v 9.10). The modeled structure was optimized by applying a molecular dynamics simulation for 2 ns with the CHARMM (Chemistry at HARvard Macromolecular Mechanics) 27 force field in NAMD (NAnoscale Molecular Dynamics program; v 2.9) and then evaluated by calculating the stereochemical quality of the protein. The flexible docking for the interaction phenomenon of the template consists of ligand-related inhibitor molecules from the ZINC (ZINC Is Not Commercial) database using a structure-based virtual screening strategy against minimized TtFRho. Docking simulations revealed two inhibitors compounds – ZINC24934545 and ZINC72319544 – that showed high binding affinity among 2,829 drug analogs that bind with key active-site residues; these residues are considered for protein-ligand binding and unbinding pathways via steered molecular dynamics simulations. Arg215 in the model plays an important role in the stability of the protein-ligand complex via a hydrogen bonding interaction by aromatic-π contacts, and the ADMET (absorption, distribution, metabolism, and excretion) analysis of best leads indicate nontoxic in nature with good potential for drug development. PMID:25848225

Water resources of Natchitoches Parish, Louisiana

USGS Publications Warehouse

Fendick, Robert B.; Prakken, Larry B.; Griffith, Jason M.

2013-01-01

In 2005, about 33.8 million gallons per day (Mgal/d) was withdrawn from water sources in Natchitoches Parish, Louisiana. Surface water sources accounted for about 86 percent (29.2 Mgal/d) of all withdrawals whereas groundwater sources accounted for about 14 percent (4.62 Mgal/d). Withdrawals for industrial use accounted for about 42 percent (14.1 Mgal/d) of the total water withdrawn (table 2). Other categories of use included public supply, rural domestic, livestock, rice irrigation, general irrigation, and aquaculture. The city of Natchitoches used almost 5.6 Mgal/d (about 5.2 Mgal/d of surface water and 0.4 Mgal/d of ground water) for public supply. Water-use data collected at 5-year intervals from 1960 to 2005 indicated that total water withdrawals increased from about 3.5 Mgal/d in 1960 to a peak of almost 35 Mgal/d in 2000. This fact sheet summarizes basic information on the water resources of Natchitoches Parish. Information on groundwater and surface-water availability, quality, development, use, and trends is based on previously published reports listed in the Selected References section.

Two heads are better than one: crystal structure of the insect derived double domain Kazal inhibitor rhodniin in complex with thrombin.

PubMed

van de Locht, A; Lamba, D; Bauer, M; Huber, R; Friedrich, T; Kröger, B; Höffken, W; Bode, W

1995-11-01

Rhodniin is a highly specific inhibitor of thrombin isolated from the assassin bug Rhodnius prolixus. The 2.6 Angstrum crystal structure of the non-covalent complex between recombinant rhodniin and bovine alpha-thrombin reveals that the two Kazal-type domains of rhodniin bind to different sites of thrombin. The amino-terminal domain binds in a substrate-like manner to the narrow active-site cleft of thrombin; the imidazole group of the P1 His residue extends into the S1 pocket to form favourable hydrogen/ionic bonds with Asp189 at its bottom, and additionally with Glu192 at its entrance. The carboxy-terminal domain, whose distorted reactive-site loop cannot adopt the canonical conformation, docks to the fibrinogen recognition exosite via extensive electrostatic interactions. The rather acidic polypeptide linking the two domains is displaced from the thrombin surface, with none of its residues involved in direct salt bridges with thrombin. The tight (Ki = 2 x 10(-13) M) binding of rhodniin to thrombin is the result of the sum of steric and charge complementarity of the amino-terminal domain towards the active-site cleft, and of the electrostatic interactions between the carboxy-terminal domain and the exosite.

Three-dimensional studies of pathogenic peptides from the c-terminal of Trypanosoma cruzi ribosomal P proteins and their interaction with a monoclonal antibody structural model

PubMed Central

Martín, Osvaldo A; Villegas, Myriam E; Aguilar, Carlos F

2009-01-01

The acidic C-terminal peptides from Trypanosoma cruzi ribosomal P proteins are the major target of the antibody response in patients suffering Chagas chronic heart disease. It has been proposed that the disease is triggered by the cross-reaction of these antibodies with the second extra cellular loop of the β1-adrenoreceptor, brought about by the molecular mimicry between the acidic C-terminal peptides and the receptor's loop. To improve the understanding of the structural basis of the autoimmune response against heart receptors, the 3-dimensional structure of the C-terminal peptides of Trypanosoma cruzi ribosomal proteins P0 (EDDDDDFGMGALF) and P2β (EEEDDDMGFGLFD) were solved using the Electrostaticaly Driven MonteCarlo method. Their structures were compared with the second extra-cellular loop of our homology model of human rhodopsin and the existing experimental NMR structures of the C-terminal peptides from human P0 (EESDDDMGFGLFD) and from Leishmania braziliensis P0 (EEADDDMGFGLFD). Docking of Trypanosoma cruzi peptides P0, P2β and human rhodopsin loop into our anti-P2β monoclonal antibody homology model allowed to explore their interactions. The solution structure of peptides P0 and P2β can be briefly described as a bend. Although the global conformations of the peptides are not identical they shared a common region of four residues (3 to 6) that have a similar structure. The structural alignment of the five peptides also showed a surprising conformational similarity for the same residues. The antibody model and docking studies revealed a most remarkable feature in the active site, a positively charged, narrow and deep cavity where the acidic residues 3 to 6 were accommodated. These results suggest that the most important elements in the molecular peptide recognition by the antibody may be the shape of the loop and the presence of negative charges in positions 3–5 (P0, P2β) or a negative charge in position 4 (rhodopsin loop). This work describes clearly the interactions of the structural elements involved in the autoimmune mechanism of anti-P auto-antibodies cross-reaction and stimulation of the β1-adrenoreceptor and the visual pigment rhodopsin. Results from this study could lead eventually to the development of treatments to abolish receptor mediated symptoms in Chagas. PACS code: 87.15.-v PMID:19473527

Aspergillus Oryzae S2 α-Amylase Domain C Involvement in Activity and Specificity: In Vivo Proteolysis, Molecular and Docking Studies

PubMed Central

Sahnoun, Mouna; Jemli, Sonia; Trabelsi, Sahar; Ayadi, Leila; Bejar, Samir

2016-01-01

We previously reported that Aspergillus oryzae strain S2 had produced two α-amylase isoforms named AmyA and AmyB. The apparent molecular masses revealed by SDS-PAGE were 50 and 42 kDa, respectively. Yet AmyB has a higher catalytic efficiency. Based on a monitoring study of the α-amylase production in both the presence and absence of different protease inhibitors, a chymotrypsin proteolysis process was detected in vivo generating AmyB. A. oryzae S2 α-amylase gene was amplified, cloned and sequenced. The sequence analysis revealed nine exons, eight introns and an encoding open reading frame of 1500 bp corresponding to AmyA isoform. The amino-acid sequence analysis revealed aY371 potential chymotrypsin cleaving site, likely to be the AmyB C-Terminal end and two other potential sites at Y359, and F379. A zymogram with a high acrylamide concentration was used. It highlighted two other closed apparent molecular mass α-amylases termed AmyB1 and AmyB2 reaching40 kDa and 43 kDa. These isoforms could be possibly generated fromY359, and F379secondary cut, respectively. The molecular modeling study showed that AmyB preserved the (β/α)8 barrel domain and the domain B but lacked the C-terminal domain C. The contact map analysis and the docking studies strongly suggested a higher activity and substrate binding affinity for AmyB than AmyA which was previously experimentally exhibited. This could be explained by the easy catalytic cleft accessibility. PMID:27101008

The Mr 140,000 Intermediate Chain of Chlamydomonas Flagellar Inner Arm Dynein Is a WD-Repeat Protein Implicated in Dynein Arm Anchoring

PubMed Central

Yang, Pinfen; Sale, Winfield S.

1998-01-01

Previous structural and biochemical studies have revealed that the inner arm dynein I1 is targeted and anchored to a unique site located proximal to the first radial spoke in each 96-nm axoneme repeat on flagellar doublet microtubules. To determine whether intermediate chains mediate the positioning and docking of dynein complexes, we cloned and characterized the 140-kDa intermediate chain (IC140) of the I1 complex. Sequence and secondary structural analysis, with particular emphasis on β-sheet organization, predicted that IC140 contains seven WD repeats. Reexamination of other members of the dynein intermediate chain family of WD proteins indicated that these polypeptides also bear seven WD/β-sheet repeats arranged in the same pattern along each intermediate chain protein. A polyclonal antibody was raised against a 53-kDa fusion protein derived from the C-terminal third of IC140. The antibody is highly specific for IC140 and does not bind to other dynein intermediate chains or proteins in Chlamydomonas flagella. Immunofluorescent microscopy of Chlamydomonas cells confirmed that IC140 is distributed along the length of both flagellar axonemes. In vitro reconstitution experiments demonstrated that the 53-kDa C-terminal fusion protein binds specifically to axonemes lacking the I1 complex. Chemical cross-linking indicated that IC140 is closely associated with a second intermediate chain in the I1 complex. These data suggest that IC140 contains domains responsible for the assembly and docking of the I1 complex to the doublet microtubule cargo. PMID:9843573

Mutational studies on HslU and its docking mode with HslV.

PubMed

Song, H K; Hartmann, C; Ramachandran, R; Bochtler, M; Behrendt, R; Moroder, L; Huber, R

2000-12-19

HslVU is an ATP-dependent prokaryotic protease complex. Despite detailed crystal and molecular structure determinations of free HslV and HslU, the mechanism of ATP-dependent peptide and protein hydrolysis remained unclear, mainly because the productive complex of HslV and HslU could not be unambiguously identified from the crystal data. In the crystalline complex, the I domains of HslU interact with HslV. Observations based on electron microscopy data were interpreted in the light of the crystal structure to indicate an alternative mode of association with the intermediate domains away from HslV. By generation and analysis of two dozen HslU mutants, we find that the amidolytic and caseinolytic activities of HslVU are quite robust to mutations on both alternative docking surfaces on HslU. In contrast, HslVU activity against the maltose-binding protein-SulA fusion protein depends on the presence of the I domain and is also sensitive to mutations in the N-terminal and C-terminal domains of HslU. Mutational studies around the hexameric pore of HslU seem to show that it is involved in the recognition/translocation of maltose-binding protein-SulA but not of chromogenic small substrates and casein. ATP-binding site mutations, among other things, confirm the essential role of the "sensor arginine" (R393) and the "arginine finger" (R325) in the ATPase action of HslU and demonstrate an important role for E321. Additionally, we report a better refined structure of the HslVU complex crystallized along with resorufin-labeled casein.

Water resources of Washington Parish, Louisiana

USGS Publications Warehouse

White, Vincent E.; Prakken, Lawrence B.

2016-06-13

In 2010, about 34.55 million gallons per day (Mgal/d) of water were withdrawn in Washington Parish, including about 28.10 Mgal/d from groundwater sources and 6.44 Mgal/d from surface-water sources1 (table 1). Withdrawals for industrial use accounted for about 52 percent (17.80 Mgal/d) of the total water withdrawn (table 2). Other categories of use included public supply, rural domestic, irrigation, and livestock. Water-use data collected at 5-year intervals from 1960 to 2010 (fig. 2) indicated that water withdrawals peaked in 1975 at about 51.9 Mgal/d.

KSC-97pc755

NASA Image and Video Library

1997-04-29

STS-84 crew members ride in and learn how to operate an M-113 armored personnel carrier as part of the Terminal Countdown Demonstration Test (TCDT) activities. In the front seat is Pilot Eileen Marie Collins. George Hoggard, a training officer with KSC Fire Services, sits beside her on top of the personnel carrier. Directly behind Hoggard, from left, are Commander Charles J. Precourt and Mission Specialist Elena V. Kondakova (sitting) of the Russian Space Agency. At the rear, from left, are Mission Specialist C. Michael Foale and Mission Specialist Jean-Francois Clervoy of the European Space Agency. STS-84 aboard the Space Shuttle Atlantis will be the sixth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Foale will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff

CryoEM structure of the spliceosome immediately after branching

PubMed Central

Galej, Wojciech P.; Wilkinson, Max E.; Fica, Sebastian M.; Oubridge, Chris; Newman, Andrew J.; Nagai, Kiyoshi

2016-01-01

Pre-mRNA splicing proceeds by two consecutive trans-esterification reactions via a lariat-intron intermediate. We present the 3.8Å cryoEM structure of the spliceosome immediately after lariat formation. The 5’-splice site is cleaved but remains close to the catalytic Mg2+ site in the U2/U6 snRNA triplex, and the 5’-phosphate of the intron nucleotide G(+1) is linked to the branch adenosine 2’OH. The 5’-exon is held between the Prp8 N-terminal and Linker domains, and base-pairs with U5 snRNA loop 1. Non-Watson-Crick interactions between the branch helix and 5’-splice site dock the branch adenosine into the active site, while intron nucleotides +3 to +6 base-pair with the U6 snRNA ACAGAGA sequence. Isy1 and the step one factors Yju2 and Cwc25 stabilise docking of the branch helix. The intron downstream of the branch site emerges between the Prp8 RT and Linker domains and extends towards Prp16 helicase, suggesting a plausible mechanism of remodelling before exon ligation. PMID:27459055

ELMO recruits actin cross-linking family 7 (ACF7) at the cell membrane for microtubule capture and stabilization of cellular protrusions.

PubMed

Margaron, Yoran; Fradet, Nadine; Côté, Jean-François

2013-01-11

ELMO and DOCK180 proteins form an evolutionarily conserved module controlling Rac GTPase signaling during cell migration, phagocytosis, and myoblast fusion. Here, we identified the microtubule and actin-binding spectraplakin ACF7 as a novel ELMO-interacting partner. A C-terminal polyproline segment in ELMO and the last spectrin repeat of ACF7 mediate a direct interaction between these proteins. Co-expression of ELMO1 with ACF7 promoted the formation of long membrane protrusions during integrin-mediated cell spreading. Quantification of membrane dynamics established that coupling of ELMO and ACF7 increases the persistence of the protruding activity. Mechanistically, we uncovered a role for ELMO in the recruitment of ACF7 to the membrane to promote microtubule capture and stability. Functionally, these effects of ELMO and ACF7 on cytoskeletal dynamics required the Rac GEF DOCK180. In conclusion, our findings support a role for ELMO in protrusion stability by acting at the interface between the actin cytoskeleton and the microtubule network.

STS-84 crew participates in TCDT activities

NASA Technical Reports Server (NTRS)

1997-01-01

STS-84 crew members ride in and learn how to operate an M-113 armored personnel carrier as part of the Terminal Countdown Demonstration Test (TCDT) activities. In the front seat is Pilot Eileen Marie Collins. George Hoggard, a training officer with KSC Fire Services, sits beside her on top of the personnel carrier. Directly behind Hoggard, from left, are Commander Charles J. Precourt and Mission Specialist Elena V. Kondakova (sitting) of the Russian Space Agency. At the rear, from left, are Mission Specialist C. Michael Foale and Mission Specialist Jean-Francois Clervoy of the European Space Agency. STS-84 aboard the Space Shuttle Atlantis will be the sixth docking of the Space Shuttle with the Russian Space Station Mir. After docking, Foale will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff.

Antihypertensive Effects, Molecular Docking Study, and Isothermal Titration Calorimetry Assay of Angiotensin I-Converting Enzyme Inhibitory Peptides from Chlorella vulgaris.

PubMed

Xie, Jingli; Chen, Xujun; Wu, Junjie; Zhang, Yanyan; Zhou, Yan; Zhang, Lujia; Tang, Ya-Jie; Wei, Dongzhi

2018-02-14

The aim of this work is to explore angiotensin I-converting enzyme (ACE) inhibitory peptides from Chlorella vulgaris (C. vulgaris) and discover the inhibitory mechanism of the peptides. After C. vulgaris proteins were gastrointestinal digested in silico, several ACE inhibitory peptides with C-terminal tryptophan were screened. Among them, two novel noncompetitive ACE inhibitors, Thr-Thr-Trp (TTW) and Val-His-Trp (VHW), exhibited the highest inhibitory activity indicated by IC 50 values 0.61 ± 0.12 and 0.91 ± 0.31 μM, respectively. Both the peptides were demonstrated stable against gastrointestinal digestion and ACE hydrolysis. The peptides were administrated to spontaneously hypertensive rats (SHRs) in the dose 5 mg/kg body weight, and VHW could decrease 50 mmHg systolic blood pressure of SHRs (p < 0.05). Molecular docking displayed that both TTW and VHW formed six hydrogen bonds with active site pockets of ACE. Besides, isothermal titration calorimetry assay discovered that VHW could form more stable complex with ACE than TTW. Therefore, VHW was an excellent ACE inhibitor.

Louisiana Ground-Water Map No. 22: Generalized Potentiometric Surface of the Amite Aquifer and the "2,800-Foot" Sand of the Baton Rouge Area in Southeastern Louisiana, June-August 2006

USGS Publications Warehouse

Fendick, Robert B.

2007-01-01

The Amite aquifer and the '2,800-foot' sand of the Baton Rouge area (hereafter referred to as the '2,800-foot' sand) are principal sources of fresh ground water in southeastern Louisiana. Both the Amite aquifer and the '2,800-foot' sand are part of the Jasper equivalent aquifer system. The Amite aquifer is heavily pumped in the Bogalusa area, and the '2,800-foot' sand is one of the most heavily pumped aquifers in East Baton Rouge Parish. The Baton Rouge fault zone, which acts as a barrier to flow, trends approximately west-northwest from a point just south of The Rigolets through southern West Baton Rouge Parish, and is the approximate southern limit of freshwater in the aquifers. For the purposes of this report, freshwater is defined as water having less than 250 milligrams per liter (mg/L) of chloride, and most of the water withdrawals described in this report were assumed to be fresh. In 2005, about 18 million gallons per day (Mgal/d) was withdrawn from the Amite aquifer, primarily for public-supply use (8.4 Mgal/d) and industrial use (9.6 Mgal/d). During this same period, about 32 Mgal/d was withdrawn from the '2,800-foot' sand, primarily for public-supply use (13 Mgal/d) and industrial use (19 Mgal/d). Public-supply and industrial withdrawals from the Amite aquifer and the '2,800-foot' sand are listed in table 1. According to data from the Louisiana State Census Data Center, some of the largest population increases in the State during the period 1990 to 2000 occurred in St. Tammany (32.4 percent), Livingston (30.2 percent), and Tangipahoa (17.4 percent) Parishes. These population increases have been accompanied by increased withdrawals of ground water during the same period: 40 percent in St. Tammany Parish, 63 percent in Livingston Parish, and 35 percent in Tangipahoa Parish. An increase in population in these parishes is expected from population displacement due to damages from Hurricanes Katrina and Rita crossing the Louisiana coast in August and September of 2005. Additional information about ground-water flow and effects of increased withdrawals on water levels in the Amite aquifer and the '2,800-foot' sand is needed to assess ground-water-development potential and to protect this resource. To meet this need, the U.S. Geological Survey, in cooperation with the Louisiana Department of Transportation and Development, began a study in 2005 to determine water levels, flow direction, and water-level trends for the Amite aquifer and '2,800-foot' sand. This report presents data and a map that describe the generalized potentiometric surface of the Amite aquifer and '2,800-foot' sand in southeastern Louisiana. Graphs of water levels in selected wells and a table of withdrawals from the Amite aquifer and '2,800-foot' sand show historical changes in water levels and water use. The generalized potentiometric-surface map illustrates the water levels and ground-water flow directions for June-August 2006. These data are on file at the USGS office in Baton Rouge, Louisiana.

Utilizing NASA Earth Observing System (EOS) Data to Determine Ideal Planting Locations for Wetland Tree Species in St. Bernard Parish, Louisiana

NASA Technical Reports Server (NTRS)

Reahard, Ross; Arguelles, Maria; Strong, Emma; Ewing, Michael; Kelly, Chelsey

2012-01-01

St. Bernard Parish, in southeast Louisiana, is rapidly losing coastal forests and wetlands due to a combination of natural and anthropogenic disturbances (e.g. subsidence, saltwater intrusion, low sedimentation, nutrient deficiency, herbivory, canal dredging, levee construction, spread of invasive species, etc.). After Hurricane Katrina severely impacted the area in 2005, multiple Non-Governmental Organizations (NGOs) have worked not only on rebuilding destroyed dwellings, but on rebuilding the ecosystems that once protected the citizens of St. Bernard Parish. Volunteer groups, NGOs, and government entities often work separately and independently of each other and use different sets of information to choose the best planting sites for coastal forests. Using NASA EOS, NRCS soil surveys, and ancillary road and canal data in conjunction with ground truthing, the team created maps of optimal planting sites for several species of wetland trees to aid in unifying these organizations, who share a common goal, under one plan. The methodology for this project created a comprehensive Geographic Information System (GIS) to help identify suitable planting sites in St. Bernard Parish. This included supplementing existing elevation data using LIDAR data and classifying existing land cover in the study area from ASTER multispectral satellite data. Low altitude AVIRIS hyperspectral imagery was used to assess the health of vegetation over an area near the intersection of the Mississippi River Gulf Outlet Canal (MRGO) and Bayou la Loutre. Historic extent of coastal forests was mapped using aerial photos from USGS collected between 1952 and 1956. The final products demonstrated the utility of combining NASA EOS with other geospatial data in assessing, monitoring, and restoring of coastal ecosystems in Louisiana. This methodology also provides a useful template for other ecological forecasting and coastal restoration applications.

Evaluation of available data sources to prioritize parishes for arsenic monitoring and outreach related to private well drinking water.

PubMed

Katner, Adrienne; Lackovic, Michelle; Streva, Kate; Paul, Vanessa; Trachtman, William Clay

2015-01-01

The objective of this assessment was to identify and evaluate data sets for use in the surveillance of arsenic hazards and private well drinking water use in Louisiana. Features, strengths, and limitations of the data sets are described, and prioritization criteria are applied to identify areas in need of further monitoring or outreach. Recent efforts have been made by the Environmental Public Health Tracking Network to evaluate the quality of private well water data for the purpose of supporting state and national surveillance activities. Like most states, Louisiana does not collect or mandate reporting of private well water quality data. Therefore, responding to public concerns about private well water quality requires an identification and evaluation of existing data. Data evaluated include measures of arsenic in groundwater and soil, private well water use, and biomonitoring results. The Environmental Protection Agency's Safe Drinking Water Information System and the US Geological Survey's Water Use data set were the most informative, nationally available data sets for conducting private well water arsenic surveillance. Three priority parishes were identified on the basis of a selection criteria, although all parishes require more private well sampling data. While the data reviewed enabled preliminary identification of parishes in need of monitoring and outreach, data limitations (particularly, a lack of statewide well water quality data) prevent a comprehensive evaluation of well water arsenic hazards and private well water use. A large number of unregistered wells further impede risk determination. Reliance on existing data sources is necessary, but development of metadata documentation is essential to prevent data misinterpretation. Increased outreach and policies to promote or mandate private well testing and reporting are needed to enable a comprehensive private well water tracking system.

STS-84 Commander Charles Precourt arriving for TCDT

NASA Technical Reports Server (NTRS)

1997-01-01

STS-84 Commander Charles J. Precourt arrives at KSCs Shuttle Landing Facility for the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. Precourt will lead the six other crew members when they travel to Mir next month aboard the Space Shuttle Atlantis. STS-84 Mission Specialist C. Michael Foale will be dropped off on Mir to become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth on Atlantis after about four months on the orbiting station. STS-84 will be the sixth Shuttle-Mir docking. Liftoff is targeted for May 15.

STS-79 CREW COMMANDER WILLIAM F. READDY AT PAD 39A FOR TCDT

NASA Technical Reports Server (NTRS)

1996-01-01

With the Space Shuttle Atlantis as a backdrop, STS-79 Commander William F. Readdy answers questions posed by reporters at Launch Pad 39A. Readdy and the other five members of the STS-79 crew, Pilot Terrence W. Wilcutt and Mission Specialists Jay Apt, Carl E. Walz, Tom Akers, and John E. Blaha, are at KSC for the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for the launch targeted for mid-September. STS-79 will be the fourth Shuttle-Mir docking and the first flight of the SPACEHAB Double Module.

STS-110 M.S. Ross in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Jerry Ross waits his turn at driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. In the background, right, is Mission Specialist Lee Morin. TCDT includes emergency egress training and a simulated launch countdown, and is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Morin in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- Waiting his turn at driving the M-113 armored personnel carrier is STS-110 Mission Specialist Lee Morin. The driving is part of Terminal Countdown Demonstration Test activities, which include emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 Pilot Frick in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Pilot Stephen Frick waits inside the M-113 armored personnel carrier to begin training on driving the vehicle, which is part of Terminal Countdown Demonstration Test activities. TCDT includes emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Ochoa in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Ellen Ochoa waits her turn at driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. In the background, right, is Pilot Stephen Frick. TCDT includes emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

Optimal Terminal Descent Guidance Logic to Achieve a Soft Lunar Touchdown

NASA Technical Reports Server (NTRS)

Lee, Allan Y.

2011-01-01

Altair Lunar Lander is the linchpin in the Constellation Program for human return to the Moon. In the 2010design reference mission, Altair is to be delivered to low Earth orbit by the Ares V heavy lift launch vehicle, and after subsequent docking with Orion in LEO, the Altair/Orion stack is delivered through trans-lunar injection (TLI). The Altair/Orion stack separates from the Ares V Earth departure stage shortly after TLI and continues the flight to the Moon as a single stack. Fig. 1 depicts one version of the Altair lunar lander.

Aerospace applications of atmospheric rendezvous.

NASA Technical Reports Server (NTRS)

Bird, J. D.; Schaezler, A. D.

1972-01-01

This paper studies the feasibility of the use of an atmospheric rendezvous concept to increase the efficiency and flexibility of space transportation systems. In this concept the second stage of a recoverable orbital launch vehicle or hypersonic transport would be built without wings, landing gear, or subsonic flight propulsion, and would be received in an atmospheric rendezvous by a carrier vehicle at the terminal point of flight for subsequent ferry to a landing site. Significant possibilities for weight improvement are shown and the attractiveness of a subsonic form of atmospheric rendezvous in either a towing or docking mode is illustrated.

Discovery of Klotho peptide antagonists against Wnt3 and Wnt3a target proteins using combination of protein engineering, protein-protein docking, peptide docking and molecular dynamics simulations.

PubMed

Mirza, Shaher Bano; Ekhteiari Salmas, Ramin; Fatmi, M Qaiser; Durdagi, Serdar

2017-12-01

The Klotho is known as lifespan enhancing protein involved in antagonizing the effect of Wnt proteins. Wnt proteins are stem cell regulators, and uninterrupted exposure of Wnt proteins to the cell can cause stem and progenitor cell senescence, which may lead to aging. Keeping in mind the importance of Klotho in Wnt signaling, in silico approaches have been applied to study the important interactions between Klotho and Wnt3 and Wnt3a (wingless-type mouse mammary tumor virus (MMTV) integration site family members 3 and 3a). The main aim of the study is to identify important residues of the Klotho that help in designing peptides which can act as Wnt antagonists. For this aim, a protein engineering study is performed for Klotho, Wnt3 and Wnt3a. During the theoretical analysis of homology models, unexpected role of number of disulfide bonds and secondary structure elements has been witnessed in case of Wnt3 and Wnt3a proteins. Different in silico experiments were carried out to observe the effect of correct number of disulfide bonds on 3D protein models. For this aim, total of 10 molecular dynamics (MD) simulations were carried out for each system. Based on the protein-protein docking simulations of selected protein models of Klotho with Wnt3 and Wnt3a, different peptides derived from Klotho have been designed. Wnt3 and Wnt3a proteins have three important domains: Index finger, N-terminal domain and a patch of ∼10 residues on the solvent exposed surface of palm domain. Protein-peptide docking of designed peptides of Klotho against three important domains of palmitoylated Wnt3 and Wnt3a yields encouraging results and leads better understanding of the Wnt protein inhibition by proposed Klotho peptides. Further in vitro studies can be carried out to verify effects of novel designed peptides as Wnt antagonists.

A docking study of enhanced intracellular survival protein from Mycobacterium tuberculosis with human DUSP16/MKP-7.

PubMed

Yoon, Hye Jin; Kim, Kyoung Hoon; Yang, Jin Kuk; Suh, Se Won; Kim, Hyunsik; Jang, Soonmin

2013-11-01

The intracellular pathogen Mycobacterium tuberculosis (Mtb) causes tuberculosis, and one of its secreted effector proteins, called enhanced intracellular survival (Eis) protein, enhances its survival in macrophages. Mtb Eis activates JNK-specific dual-specificity protein phosphatase 16 (DUSP16)/mitogen-activated protein kinase phosphatase-7 (MKP-7) through the acetylation on Lys55, thus inactivating JNK by dephosphorylation. Based on the recently reported crystal structure of Mtb Eis, a docking model for the binding of Mtb Eis to DUSP16/MKP-7 was generated. In the docking model, the substrate helix containing Lys55 of DUSP16/MKP-7 fits nicely into the active-site cleft of Mtb Eis; the twisted β-sheet of Eis domain II embraces the substrate helix from one side. Most importantly, the side-chain of Lys55 is inserted toward acetyl-CoA and the resulting distance is 4.6 Å between the NZ atom of Lys55 and the carbonyl carbon of the acetyl group in acetyl-CoA. The binding of Mtb Eis and DUSP16/MKP-7 is maintained by strong electrostatic interactions. The active-site cleft of Mtb Eis has a negatively charged surface formed by Asp25, Glu138, Asp286, Glu395 and the terminal carboxylic group of Phe396. In contrast, DUSP16/MKP-7 contains five basic residues, Lys52, Lys55, Arg56, Arg57 and Lys62, which point toward the negatively charged surface of the active-site pocket of Mtb Eis. Thus, the current docking model suggests that the binding of DUSP16/MKP-7 to Mtb Eis should be established by charge complementarity in addition to a very favorable geometric arrangement. The suggested mode of binding requires the dissociation of the hexameric Mtb Eis into dimers or monomers. This study may be useful for future studies aiming to develop inhibitors of Mtb Eis as a new anti-tuberculosis drug candidate.

Structural Asymmetry and Disulfide Bridges among Subunits Modulate the Activity of Human Malonyl-CoA Decarboxylase*

PubMed Central

Aparicio, David; Pérez-Luque, Rosa; Carpena, Xavier; Díaz, Mireia; Ferrer, Joan C.; Loewen, Peter C.; Fita, Ignacio

2013-01-01

Decarboxylation of malonyl-CoA to acetyl-CoA by malonyl-CoA decarboxylase (MCD; EC 4.1.1.9) is an essential facet in the regulation of fatty acid metabolism. The structure of human peroxisomal MCD reveals a molecular tetramer that is best described as a dimer of structural heterodimers, in which the two subunits present markedly different conformations. This molecular organization is consistent with half-of-the-sites reactivity. Each subunit has an all-helix N-terminal domain and a catalytic C-terminal domain with an acetyltransferase fold (GNAT superfamily). Intersubunit disulfide bridges, Cys-206–Cys-206 and Cys-243–Cys-243, can link the four subunits of the tetramer, imparting positive cooperativity to the catalytic process. The combination of a half-of-the-sites mechanism within each structural heterodimer and positive cooperativity in the tetramer produces a complex regulatory picture that is further complicated by the multiple intracellular locations of the enzyme. Transport into the peroxisome has been investigated by docking human MCD onto the peroxisomal import protein peroxin 5, which revealed interactions that extend beyond the C-terminal targeting motif. PMID:23482565

A Blocking Group Scan Using a Spherical Organometallic Complex Identifies an Unprecedented Binding Mode with Potent Activity In Vitro and In Vivo for the Opioid Peptide Dermorphin.

PubMed

Strack, Martin; Bedini, Andrea; Yip, King T; Lombardi, Sara; Siegmund, Daniel; Stoll, Raphael; Spampinato, Santi M; Metzler-Nolte, Nils

2016-10-04

Herein, the selective enforcement of one particular receptor-ligand interaction between specific domains of the μ-selective opioid peptide dermorphin and the μ opioid receptor is presented. For this, a blocking group scan is described which exploits the steric demand of a bis(quinolinylmethyl)amine rhenium(I) tricarbonyl complex conjugated to a number of different, strategically chosen positions of dermorphin. The prepared peptide conjugates lead to the discovery of two different binding modes: An expected N-terminal binding mode corresponds to the established view of opioid peptide binding, whereas an unexpected C-terminal binding mode is newly discovered. Surprisingly, both binding modes provide high affinity and agonistic activity at the μ opioid receptor in vitro. Furthermore, the unprecedented C-terminal binding mode shows potent dose-dependent antinociception in vivo. Finally, in silico docking studies support receptor activation by both dermorphin binding modes and suggest a biological relevance for dermorphin itself. Relevant ligand-protein interactions are similar for both binding modes, which is in line with previous protein mutation studies. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Dissection of the components for PIP2 activation and thermosensation in TRP channels

PubMed Central

Brauchi, Sebastian; Orta, Gerardo; Mascayano, Carolina; Salazar, Marcelo; Raddatz, Natalia; Urbina, Hector; Rosenmann, Eduardo; Gonzalez-Nilo, Fernando; Latorre, Ramon

2007-01-01

Phosphatidylinositol 4,5-bisphosphate (PIP2) plays a central role in the activation of several transient receptor potential (TRP) channels. The role of PIP2 on temperature gating of thermoTRP channels has not been explored in detail, and the process of temperature activation is largely unexplained. In this work, we have exchanged different segments of the C-terminal region between cold-sensitive (TRPM8) and heat-sensitive (TRPV1) channels, trying to understand the role of the segment in PIP2 and temperature activation. A chimera in which the proximal part of the C-terminal of TRPV1 replaces an equivalent section of TRPM8 C-terminal is activated by PIP2 and confers the phenotype of heat activation. PIP2, but not temperature sensitivity, disappears when positively charged residues contained in the exchanged region are neutralized. Shortening the exchanged segment to a length of 11 aa produces voltage-dependent and temperature-insensitive channels. Our findings suggest the existence of different activation domains for temperature, PIP2, and voltage. We provide an interpretation for channel–PIP2 interaction using a full-atom molecular model of TRPV1 and PIP2 docking analysis. PMID:17548815

Mechanism of ubiquinol oxidation by the bc(1) complex: role of the iron sulfur protein and its mobility.

PubMed

Crofts, A R; Guergova-Kuras, M; Huang, L; Kuras, R; Zhang, Z; Berry, E A

1999-11-30

Native structures of ubihydroquinone:cytochrome c oxidoreductase (bc(1) complex) from different sources, and structures with inhibitors in place, show a 16-22 A displacement of the [2Fe-2S] cluster and the position of the C-terminal extrinsic domain of the iron sulfur protein. None of the structures shows a static configuration that would allow catalysis of all partial reactions of quinol oxidation. We have suggested that the different conformations reflect a movement of the subunit necessary for catalysis. The displacement from an interface with cytochrome c(1) in native crystals to an interface with cytochrome b is induced by stigmatellin or 5-n-undecyl-6-hydroxy-4,7-dioxobenzothiazole (UHDBT) and involves ligand formation between His-161 of the [2Fe-2S] binding cluster and the inhibitor. The movement is a rotational displacement, so that the same conserved docking surface on the iron sulfur protein interacts with cytochrome c(1) and with cytochrome b. The mobile extrinsic domain retains essentially the same tertiary structure, and the anchoring N-terminal tail remains in the same position. The movement occurs through an extension of a helical segment in the short linking span. We report details of the protein structure for the two main configurations in the chicken heart mitochondrial complex and discuss insights into mechanism provided by the structures and by mutant strains in which the docking at the cytochrome b interface is impaired. The movement of the iron sulfur protein represents a novel mechanism of electron transfer, in which a tethered mobile head allows electron transfer through a distance without the entropic loss from free diffusion.

Staphylococcus aureus SdrE captures complement factor H's C-terminus via a novel ‘close, dock, lock and latch' mechanism for complement evasion

PubMed Central

Zhang, Yingjie; Wu, Minhao; Hang, Tianrong; Wang, Chengliang; Yang, Ye; Pan, Weimin; Zang, Jianye

2017-01-01

Complement factor H (CFH) is a soluble complement regulatory protein essential for the down-regulation of the alternative pathway on interaction with specific markers on the host cell surface. It recognizes the complement component 3b (C3b) and 3d (C3d) fragments in addition to self cell markers (i.e. glycosaminoglycans, sialic acid) to distinguish host cells that deserve protection from pathogens that should be eliminated. The Staphylococcus aureus surface protein serine–aspartate repeat protein E (SdrE) was previously reported to bind human CFH as an immune-evasion tactic. However, the molecular mechanism underlying SdrE–CFH-mediated immune evasion remains unknown. In the present study, we identified a novel region at CFH's C-terminus (CFH1206–1226), which binds SdrE N2 and N3 domains (SdrEN2N3) with high affinity, and determined the crystal structures of apo-SdrEN2N3 and the SdrEN2N3–CFH1206–1226 complex. Comparison of the structure of the CFH–SdrE complex with other CFH structures reveals that CFH's C-terminal tail flips from the main body to insert into the ligand-binding groove of SdrE. In addition, SdrEN2N3 adopts a ‘close’ state in the absence of CFH, which undergoes a large conformational change on CFH binding, suggesting a novel ‘close, dock, lock and latch' (CDLL) mechanism for SdrE to recognize its ligand. Our findings imply that SdrE functions as a ‘clamp' to capture CFH's C-terminal tail via a unique CDLL mechanism and sequesters CFH on the surface of S. aureus for complement evasion. PMID:28258151

Staphylococcus aureus SdrE captures complement factor H's C-terminus via a novel 'close, dock, lock and latch' mechanism for complement evasion.

PubMed

Zhang, Yingjie; Wu, Minhao; Hang, Tianrong; Wang, Chengliang; Yang, Ye; Pan, Weimin; Zang, Jianye; Zhang, Min; Zhang, Xuan

2017-05-04

Complement factor H (CFH) is a soluble complement regulatory protein essential for the down-regulation of the alternative pathway on interaction with specific markers on the host cell surface. It recognizes the complement component 3b (C3b) and 3d (C3d) fragments in addition to self cell markers (i.e. glycosaminoglycans, sialic acid) to distinguish host cells that deserve protection from pathogens that should be eliminated. The Staphylococcus aureus surface protein serine-aspartate repeat protein E (SdrE) was previously reported to bind human CFH as an immune-evasion tactic. However, the molecular mechanism underlying SdrE-CFH-mediated immune evasion remains unknown. In the present study, we identified a novel region at CFH's C-terminus (CFH 1206-1226 ), which binds SdrE N2 and N3 domains (SdrE N2N3 ) with high affinity, and determined the crystal structures of apo-SdrE N2N3 and the SdrE N2N3 -CFH 1206-1226 complex. Comparison of the structure of the CFH-SdrE complex with other CFH structures reveals that CFH's C-terminal tail flips from the main body to insert into the ligand-binding groove of SdrE. In addition, SdrE N2N3 adopts a 'close' state in the absence of CFH, which undergoes a large conformational change on CFH binding, suggesting a novel 'close, dock, lock and latch' (CDLL) mechanism for SdrE to recognize its ligand. Our findings imply that SdrE functions as a 'clamp' to capture CFH's C-terminal tail via a unique CDLL mechanism and sequesters CFH on the surface of S. aureus for complement evasion. © 2017 The Author(s).

Simulation of Different Truncated p16INK4a Forms and In Silico Study of Interaction with Cdk4

PubMed Central

Fahham, Najmeh; Ghahremani, Mohammad Hossein; Sardari, Soroush; Vaziri, Behrouz; Ostad, Seyed Nasser

2008-01-01

Protein-protein interactions studies can greatly increase the amount of structural and functional information pertaining to biologically active molecules and processes. The information obtained from such studies can lead to design and application of new modification in order to obtain a desired bioactivity. Many application packages and servers performing docking, such as HEX, DOT, AUTODOCK, and ZDOCK are now available for predicting the lowest free energy state of a protein complex. In this study, we have focused on cyclin-dependent kinase 4 (Cdk4), a key molecule in the regulation of cell cycle progression at the G1-S phase restriction point and p16INK4a, a tumor suppressor which inhibits Cdk4 activity. Truncated structures were created to find the more critical regions of p16 for interaction. The tertiary structures were determined by ProSAL, GENO3D Web Server. We evaluated their interactions with Cdk4 using two docking systems, HEX 4.5 and DOT 1. Calculations were performed on a high-speed computer. Minimizations and visualizations were carried out by PdbViewer 3.7. Considering shape and shape/electrostatic total energy, structures containing ANK II, III and IV motifs that lack the N-terminal region of the full length p16 molecule showed the best fit complexes among the p16 truncated forms. The free energies were compatible with that of p16 full length original form, the full length. It seems that the N-terminal of the molecule is not crucial for the interaction since the truncated structure containing only this region did not show a good total energy. PMID:19352455

The structure of lactoferrin-binding protein B from Neisseria meningitidis suggests roles in iron acquisition and neutralization of host defences

PubMed Central

Brooks, Cory L.; Arutyunova, Elena; Lemieux, M. Joanne

2014-01-01

Pathogens have evolved a range of mechanisms to acquire iron from the host during infection. Several Gram-negative pathogens including members of the genera Neisseria and Moraxella have evolved two-component systems that can extract iron from the host glycoproteins lactoferrin and transferrin. The homologous iron-transport systems consist of a membrane-bound transporter and an accessory lipoprotein. While the mechanism behind iron acquisition from transferrin is well understood, relatively little is known regarding how iron is extracted from lactoferrin. Here, the crystal structure of the N-terminal domain (N-lobe) of the accessory lipoprotein lactoferrin-binding protein B (LbpB) from the pathogen Neisseria meningitidis is reported. The structure is highly homologous to the previously determined structures of the accessory lipoprotein transferrin-binding protein B (TbpB) and LbpB from the bovine pathogen Moraxella bovis. Docking the LbpB structure with lactoferrin reveals extensive binding interactions with the N1 subdomain of lactoferrin. The nature of the interaction precludes apolactoferrin from binding LbpB, ensuring the specificity of iron-loaded lactoferrin. The specificity of LbpB safeguards proper delivery of iron-bound lactoferrin to the transporter lactoferrin-binding protein A (LbpA). The structure also reveals a possible secondary role for LbpB in protecting the bacteria from host defences. Following proteolytic digestion of lactoferrin, a cationic peptide derived from the N-terminus is released. This peptide, called lactoferricin, exhibits potent antimicrobial effects. The docked model of LbpB with lactoferrin reveals that LbpB interacts extensively with the N-terminal lactoferricin region. This may provide a venue for preventing the production of the peptide by proteolysis, or directly sequestering the peptide, protecting the bacteria from the toxic effects of lactoferricin. PMID:25286931

In human pseudouridine synthase 1 (hPus1), a C-terminal helical insert blocks tRNA from binding in the same orientation as in the Pus1 bacterial homologue TruA, consistent with their different target selectivities.

PubMed

Czudnochowski, Nadine; Wang, Amy Liya; Finer-Moore, Janet; Stroud, Robert M

2013-10-23

Human pseudouridine (Ψ) synthase Pus1 (hPus1) modifies specific uridine residues in several non-coding RNAs: tRNA, U2 spliceosomal RNA, and steroid receptor activator RNA. We report three structures of the catalytic core domain of hPus1 from two crystal forms, at 1.8Å resolution. The structures are the first of a mammalian Ψ synthase from the set of five Ψ synthase families common to all kingdoms of life. hPus1 adopts a fold similar to bacterial Ψ synthases, with a central antiparallel β-sheet flanked by helices and loops. A flexible hinge at the base of the sheet allows the enzyme to open and close around an electropositive active-site cleft. In one crystal form, a molecule of Mes [2-(N-morpholino)ethane sulfonic acid] mimics the target uridine of an RNA substrate. A positively charged electrostatic surface extends from the active site towards the N-terminus of the catalytic domain, suggesting an extensive binding site specific for target RNAs. Two α-helices C-terminal to the core domain, but unique to hPus1, extend along the back and top of the central β-sheet and form the walls of the RNA binding surface. Docking of tRNA to hPus1 in a productive orientation requires only minor conformational changes to enzyme and tRNA. The docked tRNA is bound by the electropositive surface of the protein employing a completely different binding mode than that seen for the tRNA complex of the Escherichia coli homologue TruA. Copyright © 2013 Elsevier Ltd. All rights reserved.

The carboxy-terminal αN helix of the archaeal XerA tyrosine recombinase is a molecular switch to control site-specific recombination.

PubMed

Serre, Marie-Claude; El Arnaout, Toufic; Brooks, Mark A; Durand, Dominique; Lisboa, Johnny; Lazar, Noureddine; Raynal, Bertrand; van Tilbeurgh, Herman; Quevillon-Cheruel, Sophie

2013-01-01

Tyrosine recombinases are conserved in the three kingdoms of life. Here we present the first crystal structure of a full-length archaeal tyrosine recombinase, XerA from Pyrococcus abyssi, at 3.0 Å resolution. In the absence of DNA substrate XerA crystallizes as a dimer where each monomer displays a tertiary structure similar to that of DNA-bound Tyr-recombinases. Active sites are assembled in the absence of dif except for the catalytic Tyr, which is extruded and located equidistant from each active site within the dimer. Using XerA active site mutants we demonstrate that XerA follows the classical cis-cleavage reaction, suggesting rearrangements of the C-terminal domain upon DNA binding. Surprisingly, XerA C-terminal αN helices dock in cis in a groove that, in bacterial tyrosine recombinases, accommodates in trans αN helices of neighbour monomers in the Holliday junction intermediates. Deletion of the XerA C-terminal αN helix does not impair cleavage of suicide substrates but prevents recombination catalysis. We propose that the enzymatic cycle of XerA involves the switch of the αN helix from cis to trans packing, leading to (i) repositioning of the catalytic Tyr in the active site in cis and (ii) dimer stabilisation via αN contacts in trans between monomers.

Characterization of Spindle Checkpoint Kinase Mps1 Reveals Domain with Functional and Structural Similarities to Tetratricopeptide Repeat Motifs of Bub1 and BubR1 Checkpoint Kinases*

PubMed Central

Lee, Semin; Thebault, Philippe; Freschi, Luca; Beaufils, Sylvie; Blundell, Tom L.; Landry, Christian R.; Bolanos-Garcia, Victor M.; Elowe, Sabine

2012-01-01

Kinetochore targeting of the mitotic kinases Bub1, BubR1, and Mps1 has been implicated in efficient execution of their functions in the spindle checkpoint, the self-monitoring system of the eukaryotic cell cycle that ensures chromosome segregation occurs with high fidelity. In all three kinases, kinetochore docking is mediated by the N-terminal region of the protein. Deletions within this region result in checkpoint failure and chromosome segregation defects. Here, we use an interdisciplinary approach that includes biophysical, biochemical, cell biological, and bioinformatics methods to study the N-terminal region of human Mps1. We report the identification of a tandem repeat of the tetratricopeptide repeat (TPR) motif in the N-terminal kinetochore binding region of Mps1, with close homology to the tandem TPR motif of Bub1 and BubR1. Phylogenetic analysis indicates that TPR Mps1 was acquired after the split between deutorostomes and protostomes, as it is distinguishable in chordates and echinoderms. Overexpression of TPR Mps1 resulted in decreased efficiency of both chromosome alignment and mitotic arrest, likely through displacement of endogenous Mps1 from the kinetochore and decreased Mps1 catalytic activity. Taken together, our multidisciplinary strategy provides new insights into the evolution, structural organization, and function of Mps1 N-terminal region. PMID:22187426

Characterization of spindle checkpoint kinase Mps1 reveals domain with functional and structural similarities to tetratricopeptide repeat motifs of Bub1 and BubR1 checkpoint kinases.

PubMed

Lee, Semin; Thebault, Philippe; Freschi, Luca; Beaufils, Sylvie; Blundell, Tom L; Landry, Christian R; Bolanos-Garcia, Victor M; Elowe, Sabine

2012-02-17

Kinetochore targeting of the mitotic kinases Bub1, BubR1, and Mps1 has been implicated in efficient execution of their functions in the spindle checkpoint, the self-monitoring system of the eukaryotic cell cycle that ensures chromosome segregation occurs with high fidelity. In all three kinases, kinetochore docking is mediated by the N-terminal region of the protein. Deletions within this region result in checkpoint failure and chromosome segregation defects. Here, we use an interdisciplinary approach that includes biophysical, biochemical, cell biological, and bioinformatics methods to study the N-terminal region of human Mps1. We report the identification of a tandem repeat of the tetratricopeptide repeat (TPR) motif in the N-terminal kinetochore binding region of Mps1, with close homology to the tandem TPR motif of Bub1 and BubR1. Phylogenetic analysis indicates that TPR Mps1 was acquired after the split between deutorostomes and protostomes, as it is distinguishable in chordates and echinoderms. Overexpression of TPR Mps1 resulted in decreased efficiency of both chromosome alignment and mitotic arrest, likely through displacement of endogenous Mps1 from the kinetochore and decreased Mps1 catalytic activity. Taken together, our multidisciplinary strategy provides new insights into the evolution, structural organization, and function of Mps1 N-terminal region.

Persistence of evolutionary memory: primordial six-transmembrane helical domain mu opiate receptors selectively linked to endogenous morphine signaling.

PubMed

Kream, Richard M; Sheehan, Melinda; Cadet, Patrick; Mantione, Kirk J; Zhu, Wei; Casares, Federico; Stefano, George B

2007-12-01

Biochemical, molecular and pharmacological evidence for two unique six-transmembrane helical (TMH) domain opiate receptors expressed from the micro opioid receptor (MOR) gene have been shown. Designated micro3 and micro4 receptors, both protein species are Class A rhodopsin-like members of the superfamily of G-protein coupled receptors but are selectively tailored to mediate the cellular regulatory effects of endogenous morphine and related morphinan alkaloids via stimulation of nitric oxide (NO) production and release. Both micro3 and micro4 receptors lack an amino acid sequence of approximately 90 amino acids that constitute the extracellular N-terminal and TMH1 domains and part of the first intracellular loop of the micro1 receptor, but retain the empirically defined ligand binding pocket distributed across conserved TMH2, TMH3, and TMH7 domains of the micro1 sequence. Additionally, the receptor proteins are terminated by unique intracellular C-terminal amino acid sequences that serve as putative coupling or docking domains required for constitutive NO synthase activation. Because the recognition profile of micro3 and micro4 receptors is restricted to rigid benzylisoquinoline alkaloids typified by morphine and its extended family of chemical congeners, it is hypothesized that conformational stabilization provided by interaction of extended extracellular N-terminal protein domains and the extracellular loops is required for binding of endogenous opioid peptides as well as synthetic flexible opiate alkaloids.

Water resources of the Southern Hills regional aquifer system, southeastern Louisiana

USGS Publications Warehouse

White, Vincent E.

2017-03-01

Information concerning the availability, use, and quality of groundwater in the 10 parishes overlying the Southern Hills regional aquifer system of Louisiana (fig. 1) is critical for water-supply management. The purpose of this fact sheet is to present information that can be used by water managers, residents, and others for stewardship of this vital resource. Information on the availability, past and current use, use trends, and water quality from groundwater sources in these parishes is presented. Previously published reports (see References Cited section) and data stored in the U.S. Geological Survey’s National Water Information System (U.S. Geological Survey, 2017) are the primary sources of the information presented here.

Structure and substrate recruitment of the human spindle checkpoint kinase Bub1.

PubMed

Kang, Jungseog; Yang, Maojun; Li, Bing; Qi, Wei; Zhang, Chao; Shokat, Kevan M; Tomchick, Diana R; Machius, Mischa; Yu, Hongtao

2008-11-07

In mitosis, the spindle checkpoint detects a single unattached kinetochore, inhibits the anaphase-promoting complex or cyclosome (APC/C), and prevents premature sister chromatid separation. The checkpoint kinase Bub1 contributes to checkpoint sensitivity through phosphorylating the APC/C activator, Cdc20, and inhibiting APC/C catalytically. We report here the crystal structure of the kinase domain of Bub1, revealing the requirement of an N-terminal extension for its kinase activity. Though the activation segment of Bub1 is ordered and has structural features indicative of active kinases, the C-terminal portion of this segment sterically restricts substrate access to the active site. Bub1 uses docking motifs, so-called KEN boxes, outside its kinase domain to recruit Cdc20, one of two known KEN box receptors. The KEN boxes of Bub1 are required for the spindle checkpoint in human cells. Therefore, its unusual active-site conformation and mode of substrate recruitment suggest that Bub1 has an exquisitely tuned specificity for Cdc20.

Structural insights into RNA processing by the human RISC-loading complex.

PubMed

Wang, Hong-Wei; Noland, Cameron; Siridechadilok, Bunpote; Taylor, David W; Ma, Enbo; Felderer, Karin; Doudna, Jennifer A; Nogales, Eva

2009-11-01

Targeted gene silencing by RNA interference (RNAi) requires loading of a short guide RNA (small interfering RNA (siRNA) or microRNA (miRNA)) onto an Argonaute protein to form the functional center of an RNA-induced silencing complex (RISC). In humans, Argonaute2 (AGO2) assembles with the guide RNA-generating enzyme Dicer and the RNA-binding protein TRBP to form a RISC-loading complex (RLC), which is necessary for efficient transfer of nascent siRNAs and miRNAs from Dicer to AGO2. Here, using single-particle EM analysis, we show that human Dicer has an L-shaped structure. The RLC Dicer's N-terminal DExH/D domain, located in a short 'base branch', interacts with TRBP, whereas its C-terminal catalytic domains in the main body are proximal to AGO2. A model generated by docking the available atomic structures of Dicer and Argonaute homologs into the RLC reconstruction suggests a mechanism for siRNA transfer from Dicer to AGO2.

Clarinet (CLA-1), a novel active zone protein required for synaptic vesicle clustering and release

PubMed Central

Nelson, Jessica; Richmond, Janet E; Colón-Ramos, Daniel A; Shen, Kang

2017-01-01

Active zone proteins cluster synaptic vesicles at presynaptic terminals and coordinate their release. In forward genetic screens, we isolated a novel Caenorhabditis elegans active zone gene, clarinet (cla-1). cla-1 mutants exhibit defects in synaptic vesicle clustering, active zone structure and synapse number. As a result, they have reduced spontaneous vesicle release and increased synaptic depression. cla-1 mutants show defects in vesicle distribution near the presynaptic dense projection, with fewer undocked vesicles contacting the dense projection and more docked vesicles at the plasma membrane. cla-1 encodes three isoforms containing common C-terminal PDZ and C2 domains with homology to vertebrate active zone proteins Piccolo and RIM. The C-termini of all isoforms localize to the active zone. Specific loss of the ~9000 amino acid long isoform results in vesicle clustering defects and increased synaptic depression. Our data indicate that specific isoforms of clarinet serve distinct functions, regulating synapse development, vesicle clustering and release. PMID:29160205

[3D structure of DKK1 indicates its involvement in both canonical and non-canonical Wnt pathways].

PubMed

Khalili, S; Rasaee, M J; Bamdad, T

2017-01-01

Dikkoppf-1 (DKK1) is an antagonist of the canonical Wnt signaling pathway. The importance of DKK1 as a diagnostic and therapeutic agent in a wide range of diseases along with its significance in a variety of biological processes accentuate the necessity to decipher its 3D structure that would pave the way towards the development of relevant selective inhibitors. A DKK1 structure model predicted by the Robetta server with structural refinements including a 10 ns molecular dynamics run was subjected to functional and docking analyses. We hypothesize that the N-terminal region of the DKK1 molecule could be functionally important for both canonical and noncanonical Wnt pathways. Moreover, it seems that DKK1 could be involved in interactions with the Frizzled receptors, leading to the activation of the Planar Cell Polarity (PCP) pathway (activation of Jun N-terminal kinase (JNK) Pathway) and Wnt/Ca^(2+) pathway (activation of CamKII).

Assessment of heavy metal and petroleum hydrocarbon contamination in the Sultanate of Oman with emphasis on harbours, marinas, terminals and ports.

PubMed

Jupp, Barry P; Fowler, Scott W; Dobretsov, Sergey; van der Wiele, Henk; Al-Ghafri, Ahmed

2017-08-15

The assessment here includes data on levels of contaminants (petroleum hydrocarbons and heavy metals) in sediments and biomonitor organisms, including the eulittoral rock oyster Saccostrea cucullata and subtidal biomonitors, the barnacle Balanus trigonus and the antipatharian coral Antipathes sp., at harbours, marinas, terminals and large ports along the coastline of Oman. TBT levels in harbour and port sediments up to a maximum of 100ppb TBT dry weight are highlighted. Oysters contained concentrations up to 367ppm mg TPH/kg dry weight. The maximum levels of Cd, Cu, Pb and Zn were found in the subtidal sediments and barnacles at the oil tanker loading Single Buoy Mooring stations in Mina Al Fahal. In general, the levels of most of the contaminants analysed are at low to moderate concentrations compared to those in highly contaminated sites such as shipyards and dry docks, but continued monitoring is recommended especially during any dredging campaigns. Copyright © 2017 Elsevier Ltd. All rights reserved.

Phosphatidylglycerol directs binding and inhibitory action of EIIAGlc protein on the maltose transporter.

PubMed

Bao, Huan; Duong, Franck

2013-08-16

The signal-transducing protein EIIA(Glc) belongs to the phosphoenolpyruvate carbohydrate phosphotransferase system. In its dephosphorylated state, EIIA(Glc) is a negative regulator for several permeases, including the maltose transporter MalFGK2. How EIIA(Glc) is targeted to the membrane, how it interacts with the transporter, and how it inhibits sugar uptake remain obscure. We show here that acidic phospholipids together with the N-terminal tail of EIIA(Glc) are essential for the high affinity binding of the protein to the transporter. Using protein docking prediction and chemical cross-linking, we demonstrate that EIIA(Glc) binds to the MalK dimer, interacting with both the nucleotide-binding and the C-terminal regulatory domains. Dissection of the ATPase cycle reveals that EIIA(Glc) does not affect the binding of ATP but rather inhibits the capacity of MalK to cleave ATP. We propose a mechanism of maltose transport inhibition by this central amphitropic regulatory protein.

STS-110 Commander Bloomfield in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Commander Michael Bloomfield is eager to take his turn turn at driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. To his left is Mission Specialist Steven Smith. TCDT includes emergency egress training and a simulated launch countdown, and is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-86 Mission Specialist Wolf at SLF for TCDT

NASA Technical Reports Server (NTRS)

1997-01-01

STS-86 Mission Specialist David A. Wolf arrives in a T-38 jet at KSCs Shuttle Landing Facility for the Terminal Countdown Demonstration Test (TCDT), a dress rehearsal for launch. STS-86 will be the seventh docking of the Space Shuttle with the Russian Space Station Mir. During the mission, Wolf will transfer to the Mir 24 crew, replacing astronaut C. Michael Foale, who will return to Earth with the rest of the STS-86 crew. Wolf is scheduled to remain on the Mir until his replacement arrives on the STS-89 mission in January. STS-86 is targeted for a Sept. 25 launch aboard the Space Shuttle Atlantis.

STS-110 M.S. Smith, Ross, and Walheim in Atlantis during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- (Left to right) STS-110 Mission Specialists Steven Smith, Jerry Ross and Rex Walheim settle into their seats aboard Space Shuttle Atlantis prior to a simulated launch countdown. The simulation is part of Terminal Countdown Demonstration Test activities. TCDT also includes emergency egress training and is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Smith and Ross in slidewire basket during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialists Steven L. Smith (left) and Jerry L. Ross (right) get ready to climb out of the slidewire basket, part of emergency egress equipment on the launch pad.. The crew is taking part in Terminal Countdown Demonstration Test activities, which also include a simulated launch countdown, held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

Results from Coalbed Methane Drilling in Winn Parish, Louisiana

USGS Publications Warehouse

Hackley, Paul C.; Warwick, Peter D.; Breland, F. Clayton; Richard, Troy E.; Ross, Kirk

2007-01-01

A coalbed methane (CBM) well in Winn Parish, Louisiana, named CZ Fee A No. 114, was drilled by Vintage Petroleum, Inc., in January 2004. The CZ Fee A No. 114 CBM well was drilled to a total depth of 3,114 ft and perforated at 2,730-2,734 ft in a Wilcox Group (Paleocene-Eocene) coal bed. Analytical data from the drilling project have been released by Vintage Petroleum, Inc., and by the current well operator, Hilcorp Energy Corporation (see Appendix) to the Louisiana Geological Survey (LGS) and the U.S. Geological Survey (USGS) for publication. General information about the CZ Fee A No. 114 CBM well is compiled in Table 1, and analytical data from the well are included in following sections. The CZ Fee A No. 114 well is located in eastern Winn Parish, approximately 30 mi east of where Wilcox Group strata crop out on the Sabine Uplift (fig. 1). In the CZ Fee A No. 114 well, lower Wilcox Paleocene coal beds targeted for CBM production occur at depths of 2,600-3,000 ft (fig. 2). Average monthly gas production for the reporting period August 1, 2004, through May 1, 2005, was 450 thousand cubic feet (Mcf) (Louisiana Department of Natural Resources, 2005).

Belonging and community: understandings of "home" and "friends" among the English poor, 1750-1850.

PubMed

Snell, K D M

2012-01-01

This article is based on unique ‘narratives of the poor’, that is, letters from poor people to their parishes of settlement, petitions to the London Refuge of the Destitute, and letters from mothers to the London Foundling Hospital, with supportive evidence from newspapers. These display fundamental concepts among the English poor, who were often poorly literate, and who comprised the majority of the population. Discussion focuses upon their understandings of ‘home’, ‘belonging’, ‘friends’, and ‘community’. These key concepts are related here to modern discussions, to set important concerns into historical perspective. ‘Friends’, valuably studied by sociologists such as Pahl, had a wide meaning in the past. ‘Home’ meant (alongside abode) one's parish of legal settlement, where one was entitled to poor relief under the settlement/poor laws. This was where one ‘belonged’. Ideas of ‘community’ were held and displayed even at a distance, among frequently migrant poor, who wrote to their parishes showing strong ties of attachment, right, and local obligation. This discussion explores these issues in connection with belonging and identity. It elucidates the meaning and working of poor law settlement, and is also an exploration of popular mentalities and the semi-literate ways in which these were expressed.

Demographic history of an English coal-mining parish: Houghton-le-Spring, County Durham, 1660-1820

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peck, T.R.

In 1666 the size of the population of Houghton-le-Spring was 2332. By 1821, the population had grown to 12,889 persons. The population of the village grew primarily due to increasing fertility during the period. The Total Martial Fertility Ratio (20-49) increased from 6.98 to 8.37 between the late seventeenth and the early nineteenth centuries. The mean age at first marriage for brides and grooms declined on average by three years. During the 160 years of the study the level of mortality actually increased. In the parish of Houghton-le-Spring, the coal miners, who were prime examples of proletarians, did marry muchmore » younger than a person engaged in the traditional occupations. Thus, the primary cause of the increasing level of fertility in the parish was the process of proletarianization. The study of mortality revealed that coal miners and their dependents suffered higher rates of mortality than persons in other occupations. These higher rates were partly caused by a greater incidence of deaths due to mining accidents. The population proved to be surprisingly immobile. Approximately 90% of the population lived their entire life within fifteen miles of their place of birth. This was true of all occupational groups.« less

Flood Protection Through Landscape Scale Ecosystem Restoration- Quantifying the Benefits

NASA Astrophysics Data System (ADS)

Pinero, E.

2017-12-01

Hurricane Harvey illustrated the risks associated with storm surges on coastal areas, especially during severe storms. One way to address storm surges is to utilize the natural ability of offshore coastal land to dampen their severity. In addition to helping reduce storm surge intensity and related damage, restoring the land will generate numerous co-benefits such as carbon sequestration and water quality improvement. The session will discuss the analytical methodology that helps define what is the most resilient species to take root, and to calculate quantified benefits. It will also address the quantification and monetization of benefits to make the business case for restoration. In 2005, Hurricanes Katrina and Rita damaged levees along the Gulf of Mexico, leading to major forest degradation, habitat deterioration and reduced wildlife use. As a result, this area lost an extensive amount of land, with contiguous sections of wetlands being converted to open water. The Restore the Earth Foundation's North American Amazon project intends to restore one million acres of forests and forested wetlands in the lower Mississippi River Valley. The proposed area for the first phase of this project was once an historic bald cypress forested wetland, which was degraded due to increased salinity levels and extreme fluctuations in hydrology. The Terrebonne and Lafourche Parishes, the "bayou parishes", communities with a combined population of over 200,000, sit on thin fingers of land that are protected by surrounding wetland swamps and wetlands, beyond which is the Gulf of Mexico. The Parishes depend on fishing, hunting, trapping, boat building, off-shore oil and gas production and support activities. Yet these communities are highly vulnerable to risks from natural hazards and future land loss. The ground is at or near sea level and therefore easily inundated by storm surges if not protected by wetlands. While some communities are protected by a levee system, the Terrebonne and Lafourche Parishes remain vulnerable to the impacts of flooding and hurricanes.

Utilizing NASA EOS to Assist in Determining Suitable Planting Locations for Bottomland Hardwood Trees in St. Bernard Parish, Louisiana

NASA Astrophysics Data System (ADS)

Reahard, R. R.; Arguelles, M.; Ewing, M.; Kelly, C.; Strong, E.

2012-12-01

St. Bernard Parish, located in southeast Louisiana, is rapidly losing coastal forests and wetlands due to a variety of natural and anthropogenic disturbances (e.g. subsidence, saltwater intrusion, low sedimentation, nutrient deficiency, herbivory, canal dredging, levee construction, spread of invasive species, etc.). After Hurricane Katrina severely impacted the area in 2005, multiple Non-Governmental Organizations (NGOs) have focused not only on rebuilding destroyed dwellings, but on rebuilding the ecosystems that once protected the citizens of St. Bernard Parish. Volunteer groups, NGOs, and government entities often work separately and independently of each other and use different sets of information to choose the best planting sites for restoring coastal forests. Using NASA Earth Observing Systems (EOS), Natural Resource Conservation Service (NRCS) soil surveys, and ancillary road and canal data in conjunction with ground truthing, the team created maps of optimal planting sites for several species of bottomland hardwood trees to aid in unifying these organizations, who share a common goal, under one plan. The methodology for this project created a comprehensive Geographic Information System (GIS) to help identify suitable planting sites in St. Bernard Parish. This included supplementing existing elevation data using Digital Elevation Models derived from LIDAR data, and determining existing land cover in the study area from classified Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) imagery. Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) data from a single low-altitude swath was used to assess the health of vegetation over an area near the Mississippi River Gulf Outlet Canal (MRGO) and Bayou La Loutre. Historic extent of coastal forests was also mapped using aerial photos collected between 1952 and 1956. The final products demonstrated yet another application of NASA EOS in the rebuilding and monitoring of coastal ecosystems in Louisiana. This methodology will also serve as a useful template for other ecological forecasting and coastal restoration applications.

Counting Souls: Towards an historical demography of Africa

PubMed Central

Walters, Sarah

2016-01-01

Background Little is known about even the relatively recent demographic history of Africa, because of the lack of data. Elsewhere, historical demographic trends have been reconstructed by applying family reconstitution to church records. Such data also exist throughout Africa from the late 19th century. For the Counting Souls Project, nearly one million records from the oldest Catholic parishes in East and Central Africa have been digitised. These data are currently being processed into a relational database. The aim of this paper is to describe their potential for demographic reconstruction in the region, and to outline how their provenance defines the analytical approach. Results Empirically, religion is correlated with population patterns in contemporary Africa, and, historically, reproduction and family formation were central to Christian mission in the region. Measuring change using sources created by agents of change raises questions of epistemology, causation, and selection bias. This paper describes how these concerns are balanced by missionary determination to follow the intimate lives of their parishioners, to monitor their ‘souls’, and to measure their morality, fidelity, and faith. This intimate recording means that the African parish registers, together with related sources such as missionary diaries and letters and oral histories, describe qualitatively and quantitatively what happens to individual agency (reproductive decision-making) when the moral hegemony shifts (via evangelisation and colonisation), and how the two interact in a reciprocal process of change. Conclusion Reconstructing long-term demographic trends using parish registers in Africa is therefore more than simply generating rates and testing their reliability. It is a bigger description of how ‘decision rules’ are structured and re-structured, unpicking the cognitive seam between individual and culture by exploring dynamic micro-interactions between reproduction, honour, hope, and modernity over the long term. With such a mixed-methods approach, parish registers offer real potential for historical demography in Africa. PMID:27313490

Status of Water Levels and Selected Water-Quality Conditions in the Sparta-Memphis Aquifer in Arkansas and the Status of Water Levels in the Sparta Aquifer in Louisiana, Spring 2005

USGS Publications Warehouse

Schrader, T.P.; Jones, J.S.

2007-01-01

The U.S. Geological Survey in cooperation with the Arkansas Natural Resources Commission, the Arkansas Geological Commission, and the Louisiana Department of Transportation and Development has monitored water levels in the Sparta Sand of Claiborne Group and Memphis Sand of Claiborne Group since the 1920's. Ground-water withdrawals have increased while water levels have declined since monitoring was initiated. This report has been produced to describe ground-water levels in the aquifers in the Sparta Sand and Memphis Sand and provide information for the management of this valuable resource. The 2005 potentiometric-surface map of the aquifers in the Sparta Sand and Memphis Sand was constructed using water-level data collected in 333 wells in Arkansas and 120 wells in Louisiana during the spring of 2005. The highest water-level altitude measured in Arkansas was 327 feet above National Geodetic Vertical Datum of 1929 located in Grant County in the outcrop at the western boundary of the study area; the lowest water-level altitude was 189 feet below National Geodetic Vertical Datum of 1929 in Union County. The highest water-level altitude measured in Louisiana was 246 feet above National Geodetic Vertical Datum of 1929 located in Bossier Parish in the outcrop area near the western boundary of the study area; the lowest water-level altitude was 226 feet below National Geodetic Vertical Datum of 1929 in central Ouachita Parish. Three large depressions centered in Columbia, Jefferson, and Union Counties in Arkansas are the result of large withdrawals for industrial and public supplies. In Louisiana, three major pumping centers are in Ouachita, Jackson, and Lincoln Parishes. Water withdrawals from these major pumping centers primarily is used for industrial and public-supply purposes. Withdrawals from Ouachita and Lincoln Parishes and Union County, Arkansas, primarily for industrial purposes, have caused the resulting cones of depression to coalesce so that the -40 foot potentiometric contour encircles the three pumping centers. Seven smaller depressions are evident on the 2005 Sparta-Memphis potentiometric-surface map located in Webster and Winn Parishes, Louisiana, and Calhoun, Cleveland, western Columbia, Desha, and Lafayette Counties, Arkansas. The depression in Calhoun County initially was shown in the 1996-1997 potentiometric surface. The depression in Desha County initially was shown in the 1999 potentiometric surface. The depressions in Webster and Winn Parishes were shown as early as 1975. The depressions in Cleveland, western Columbia, and Lafayette Counties initially were shown in the 2003 potentiometric surface. A map of differences in water-level measurements between 2001 and 2005 was constructed using the difference between water-level measurements from 294 wells in Arkansas and 29 wells in Louisiana. The difference in water levels between 2001 and 2005 ranged from -30.1 to 44.6 feet. The largest rise of 44.6 feet in water level measured was in Union County in Arkansas. The largest decline of 30.1 feet in water level measured was in Columbia County in Arkansas. Areas with a general rise in water levels in Arkansas are shown in Arkansas, Columbia, Craighead, Jefferson, Prairie, and the western half of Union Counties. The area around west-central Union County had rises as much as 44.6 feet, with seven wells showing a rise of 20 feet or greater, which is an annual rise of 5 feet or greater. Areas in Arkansas with a general decline in water level are shown in western Bradley, eastern Calhoun, Cleveland, Cross, Desha, Drew, Lafayette, Lee, Lincoln, Lonoke, Poinsett, and the eastern half of Union Counties. In Louisiana, the water-level difference map showed a general rise in water levels in northern Claiborne, northern Webster, and northwestern Union Parishes mainly because of a decrease in industrial withdrawals in southern Arkansas, particularly Union County. Another rise in water level was indicated in western

A python-based docking program utilizing a receptor bound ligand shape: PythDock.

PubMed

Chung, Jae Yoon; Cho, Seung Joo; Hah, Jung-Mi

2011-09-01

PythDock is a heuristic docking program that uses Python programming language with a simple scoring function and a population based search engine. The scoring function considers electrostatic and dispersion/repulsion terms. The search engine utilizes a particle swarm optimization algorithm. A grid potential map is generated using the shape information of a bound ligand within the active site. Therefore, the searching area is more relevant to the ligand binding. To evaluate the docking performance of PythDock, two well-known docking programs (AutoDock and DOCK) were also used with the same data. The accuracy of docked results were measured by the difference of the ligand structure between x-ray structure, and docked pose, i.e., average root mean squared deviation values of the bound ligand were compared for fourteen protein-ligand complexes. Since the number of ligands' rotational flexibility is an important factor affecting the accuracy of a docking, the data set was chosen to have various degrees of flexibility. Although PythDock has a scoring function simpler than those of other programs (AutoDock and DOCK), our results showed that PythDock predicted more accurate poses than both AutoDock4.2 and DOCK6.2. This indicates that PythDock could be a useful tool to study ligand-receptor interactions and could also be beneficial in structure based drug design.

Mortality in the slave and white populations of Natchitoches Parish, Louisiana, 1850.

PubMed Central

René, A. A.; Daniels, D. E.; Jones, W.; Moore, F. I.

1992-01-01

A review of mortality from the 1850 census mortality schedules of Natchitoches Parish, Louisiana has provided a snapshot of the health conditions of African-American slaves. The cause of death was abstracted from the mortality schedule and categorized according to the ninth revision of the Manual of the International Classification of Diseases. Children under the age of 9 accounted for 44% of the total mortality. Sixty-four percent of all deaths recorded occurred in the slave population. Sixty-two percent of the slave deaths occurred in the male population. Leading causes of death were helminthiasis, whooping cough, fever, cholera, and pneumonia. Reports of mortality due to Cachexia Africana (dirt eating) among slaves are discussed. PMID:1404481

Identification of novel phosphatidic acid binding domain on sphingosine kinase 1 of Arabidopsis thaliana.

PubMed

Pandit, Shatakshi; Dalal, Vikram; Mishra, Girish

2018-07-01

Phosphatidic acid (PA) is an important lipid signaling molecule which interacts with Arabidopsis thaliana Sphingosine kinase1 (AtSPHK1) during several abiotic stresses particularly drought stress as a result of Abscisic acid (ABA) signaling in guard cells. PA molecules respond by generating lipid signal and/or by binding and translocating target proteins to membrane. However, site of interaction and role of PA binding to AtSPHK1 is not clear yet. Owing to the importance of AtSPHK1 during stress signaling it is imperative to decipher the site of PA interaction with AtSPHK1. To identify the PA binding region of AtSPHK1, various deletion fragments from N-terminal and C-terminal region were prepared. Results from protein lipid overlay assay using various truncated proteins of AtSPHK1 suggested the involvement of N-terminal region, between 110 and 205 amino acids, in binding with PA. In-silico analyses performed to build homologous structure of AtSPHK1 revealed that PA docking occurs in the hydrophobic cavity of DAG-Kinase domain. Deletion of amino acids 182 VSGDGI 187 perturbed PA-AtSPHK1 binding, indicating an essential role of these six amino acids in PA-AtSPHK1 binding. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

Integrated machine learning, molecular docking and 3D-QSAR based approach for identification of potential inhibitors of trypanosomal N-myristoyltransferase.

PubMed

Singh, Nidhi; Shah, Priyanka; Dwivedi, Hemlata; Mishra, Shikha; Tripathi, Renu; Sahasrabuddhe, Amogh A; Siddiqi, Mohammad Imran

2016-11-15

N-Myristoyltransferase (NMT) catalyzes the transfer of myristate to the amino-terminal glycine of a subset of proteins, a co-translational modification involved in trafficking substrate proteins to membrane locations, stabilization and protein-protein interactions. It is a studied and validated pre-clinical drug target for fungal and parasitic infections. In the present study, a machine learning approach, docking studies and CoMFA analysis have been integrated with the objective of translation of knowledge into a pipelined workflow towards the identification of putative hits through the screening of large compound libraries. In the proposed pipeline, the reported parasitic NMT inhibitors have been used to develop predictive machine learning classification models. Simultaneously, a TbNMT complex model was generated to establish the relationship between the binding mode of the inhibitors for LmNMT and TbNMT through molecular dynamics simulation studies. A 3D-QSAR model was developed and used to predict the activity of the proposed hits in the subsequent step. The hits classified as active based on the machine learning model were assessed as the potential anti-trypanosomal NMT inhibitors through molecular docking studies, predicted activity using a QSAR model and visual inspection. In the final step, the proposed pipeline was validated through in vitro experiments. A total of seven hits have been proposed and tested in vitro for evaluation of dual inhibitory activity against Leishmania donovani and Trypanosoma brucei. Out of these five compounds showed significant inhibition against both of the organisms. The common topmost active compound SEW04173 belongs to a pyrazole carboxylate scaffold and is anticipated to enrich the chemical space with enhanced potency through optimization.

Protein docking prediction using predicted protein-protein interface.

PubMed

Li, Bin; Kihara, Daisuke

2012-01-10

Many important cellular processes are carried out by protein complexes. To provide physical pictures of interacting proteins, many computational protein-protein prediction methods have been developed in the past. However, it is still difficult to identify the correct docking complex structure within top ranks among alternative conformations. We present a novel protein docking algorithm that utilizes imperfect protein-protein binding interface prediction for guiding protein docking. Since the accuracy of protein binding site prediction varies depending on cases, the challenge is to develop a method which does not deteriorate but improves docking results by using a binding site prediction which may not be 100% accurate. The algorithm, named PI-LZerD (using Predicted Interface with Local 3D Zernike descriptor-based Docking algorithm), is based on a pair wise protein docking prediction algorithm, LZerD, which we have developed earlier. PI-LZerD starts from performing docking prediction using the provided protein-protein binding interface prediction as constraints, which is followed by the second round of docking with updated docking interface information to further improve docking conformation. Benchmark results on bound and unbound cases show that PI-LZerD consistently improves the docking prediction accuracy as compared with docking without using binding site prediction or using the binding site prediction as post-filtering. We have developed PI-LZerD, a pairwise docking algorithm, which uses imperfect protein-protein binding interface prediction to improve docking accuracy. PI-LZerD consistently showed better prediction accuracy over alternative methods in the series of benchmark experiments including docking using actual docking interface site predictions as well as unbound docking cases.

Discourse versus practice: are traditional practices and beliefs in pregnancy and childbirth included or excluded in the Ecuadorian health care system?

PubMed

Gallegos, Carlos Andres; Waters, William F; Kuhlmann, Anne Sebert

2017-03-01

Traditional beliefs, knowledge and practices are formally integrated into the Ecuadorian health system. We sought to understand whether they are integrated in practice. Qualitative data were collected in two rural parishes in the central highlands of Ecuador through four focus group discussions (30 participants), eight key informant interviews, three participatory exercises (24 participants), structured observations of health facilities and analysis of official documents. We found different levels of integration, coexistence, tolerance, and intolerance of traditional health beliefs and practices in health facilities. One parish has undergone dramatic social and cultural transformation, and the role of traditional birth attendants is limited. In the other parish, traditional indigenous norms and values persist, and traditional birth attendants are sought during pregnancy and childbirth. The degree to which traditional birth attendants, indigenous women and their families are included or excluded from public health services depends largely on decisions taken by local health professionals. Formal policies in Ecuador stipulate that health care should be intercultural, but the role of traditional birth attendants is not necessarily incorporated in practice. The integration of culturally-informed beliefs and practices is critical for providing appropriate health services to members of vulnerable populations. © The Author 2016. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Hydrogeologic framework and potentiometric surface of the Williamson Creek Aquifer "B" sand in the Fort Polk area, Vernon Parish, Louisiana, March 1997

USGS Publications Warehouse

Prakken, Lawrence B.

2001-01-01

The Fort Polk Military Reservation(hereinafter referred to as the Reservation) in Vernon Parish, Louisiana, occupies 107,024 acres of lands; 66,998 acres are owned by the U.S. Army, and 40,026 acres are owned by the U.S. Forest Service (Dan Nance, Fort Polk Public Affairs office, written commun., 1998).  Some areas of the Reservation, such as an artillery impact area, live-firm areas, and special purpose training areas, are restricted to military personnel.  The Williamson Creek and Carnahan Bayou aquifers are major sources of freshwater for the Reservation.  IN 1996, the Reservation's total water pumpage from the Williamson Creek aquifer for public supply was approxiamately 2.4 million gallons per day (Edward Ducote, Water and Wastewater Branch, Directorate of Public Works, Fort Polk, written commun., 1998).  In 1997, the water withdrawl rate for public supply was approzimately 1.88 million gallons per day from 11 wells completed in the Williamson Creek aquifer.  Almost all of the water was withdrawn from the "B" sand, which is the predominant sand layer of the Williamson Creek aquifer in the study area.  In 1997, nearby Leesville, the seat of Vernon Parish, withdrew all its water for public supply from the deeper Carnahan Bayou aquifer.

Hemidactylus parvimaculatus (Sri Lankan spotted house gecko)

USGS Publications Warehouse

Glorioso, Brad M.

2016-01-01

USA: LOUISIANA: St. Tammany Parish: private property ca. 4 km S of Abita Springs, E of State Hwy 59, and N of Interstate 12 (30.44000°N, 90.02000°W; WGS 84). 18 August 2013. Brad M. Glorioso. Verified by David Heckard. Florida Museum of Natural History (UF 176422, photo voucher). New parish record. This species was first reported in the Americas in the vicinity of Audubon Zoo in New Orleans, Louisiana (Heckard et al. 2013. IRCF Reptiles & Amphibians 20:192–196). This is the third report of this species in Louisiana (Heckard et al. 2013, op. cit.; Borgardt 2015. Herpetol. Rev. 46:217), and is now documented from Orleans, Jefferson, and St. Tammany parishes in southeast Louisiana. The individual was located at night, ca. 10 m from a dwelling on the forest floor amid a downed picket fence, which was resting atop a thick layer of pine needles. There are H. turcicus at the property, but this individual was recognized as unusual, and many photos were taken before releasing the animal. It was not until much later that it was determined to be H. parvimaculatus. The origin of this individual is unknown, as the owners of this 1.62-ha property are elderly and do not keep any pets. Subsequent casual searches have not turned up any new individuals. I thank David Heckard for his help with identification and discussion of this species in Louisiana.

[Was Spanish influenza in Kristiania a socially neutral disease?].

PubMed

Mamelund, Svenn-Erik

2005-12-15

A debate has been going on since 1918 over whether there were social differences in mortality from Spanish influenza. Mot commentators have concluded that mortality was socially neutral. In this paper it is discussed why the influenza pandemic of 1918-19 was different from recent influenza epidemics, which have displayed greater social differences in mortality than most other causes of death. Multivariate analysis and event history data are used for the first time to analyse the variation in mortality from Spanish influenza. The study is confined to a west end and an east end parish in Norway's capital city. Historical demographic data for Norway has a good reputation internationally. The data are also unique because--Norway being a neutral country--they can be used to estimate the effect of the Spanish influenza on mortality net of the effect of the First World War. Middle class and bourgeois mortality was 19-25% lower than working class mortality (not significant). Those living in apartments with four to six rooms had on average 50 % lower mortality than those living in one-room apartments (significant). Moreover, the east end parish had 50 % higher mortality than the west end parish (significant). These findings challenge the myth that Spanish influenza picked its victims at random. The study may have international relevance because data difficult to obtain for other countries have been used.

Overview of particulate exposures in the US trucking industry

PubMed Central

Smith, Thomas J.; Davis, Mary E.; Reaser, Paul; Natkin, Jonathan; Hart, Jaime E; Laden, Francine; Heff, Allan; Garshick, Eric

2007-01-01

As part of a large epidemiologic study of lung cancer, 55,000 subjects, we have conducted a nation-wide survey of particulate exposures in the US trucking industry. The goal is to differentiate the risks from various types of particulate exposures, such as traffic emissions and general air pollution. We hypothesize that exposures defined by job and work site characteristics can be linked with subjects using their personal job histories. This report covers exposures at 36 randomly sited large truck freight terminals in the US. Measurements were made of PM2.5, elemental carbon (EC), and organic carbon (OC) upwind of the terminal (background) and in work areas, and by personal samples. Significant differences in exposure intensity, dg/m3, were found for work locations and jobs relative to background levels (GM[GSD]) at terminal sites: PM2.5 9.8[2.34], EC 0.5[3.24], and OC 5.0[1.76]. Using EC as a marker for diesel particles, work locations varied significantly: office 0.3[3.7], dock area 0.7[2.89] and shop area 1.5[3.52]), as did job titles (non-smokers): clerk 0.1[9.98], dockworker 0.8[2.13], and mechanic 2.0[3.82]. Cigarette smoking contributed substantially to personal exposures, approximately doubling PM2.5 and OC, but having less of an effect on EC. Large differences were seen across the terminal sites due to differences in local regional air pollution levels from traffic and other sources. We conclude that it will be possible to estimate current exposures of the cohort using an exposure assignment matrix based on job title, work location, and terminal site. This distribution overlaps substantially with the general public’s exposure to these sources. PMID:16826284

Lessons in molecular recognition. 2. Assessing and improving cross-docking accuracy.

PubMed

Sutherland, Jeffrey J; Nandigam, Ravi K; Erickson, Jon A; Vieth, Michal

2007-01-01

Docking methods are used to predict the manner in which a ligand binds to a protein receptor. Many studies have assessed the success rate of programs in self-docking tests, whereby a ligand is docked into the protein structure from which it was extracted. Cross-docking, or using a protein structure from a complex containing a different ligand, provides a more realistic assessment of a docking program's ability to reproduce X-ray results. In this work, cross-docking was performed with CDocker, Fred, and Rocs using multiple X-ray structures for eight proteins (two kinases, one nuclear hormone receptor, one serine protease, two metalloproteases, and two phosphodiesterases). While average cross-docking accuracy is not encouraging, it is shown that using the protein structure from the complex that contains the bound ligand most similar to the docked ligand increases docking accuracy for all methods ("similarity selection"). Identifying the most successful protein conformer ("best selection") and similarity selection substantially reduce the difference between self-docking and average cross-docking accuracy. We identify universal predictors of docking accuracy (i.e., showing consistent behavior across most protein-method combinations), and show that models for predicting docking accuracy built using these parameters can be used to select the most appropriate docking method.

Structural Modifications of Benzimidazoles via Multi-Step Synthesis and Their Impact on Sirtuin-Inhibitory Activity.

PubMed

Yoon, Yeong Keng; Choon, Tan Soo

2016-01-01

Benzimidazole derivatives have been shown to possess sirtuin-inhibitory activity. In the continuous search for potent sirtuin inhibitors, systematic changes on the terminal benzene ring were performed on previously identified benzimidazole-based sirtuin inhibitors, to further investigate their structure-activity relationships. It was demonstrated that the sirtuin activities of these novel compounds followed the trend where meta-substituted compounds possessed markedly weaker potency than ortho- and para-substituted compounds, with the exception of halogenated substituents. Molecular docking studies were carried out to rationalize these observations. Apart from this, the methods used to synthesize the interesting compounds are also discussed. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

STS-110 crew in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- With fellow crew members Mission Specialists Rex Walheim and Ellen Ochoa (waving her arm) and a trainer aboard, STS-110 Pilot Stephen Frick stirs up dust behind the M-113 armored personnel carrier as he practices driving it. The training is part of Terminal Countdown Demonstration Test activities, which include emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Ochoa in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- STS-110 Mission Specialist Ellen Ochoa practices driving the M-113 armored personnel carrier, part of Terminal Countdown Demonstration Test activities. Accompanying her are fellow crew members Mission Specialist Rex Walheim (far left) and Pilot Stephen Frink (second from left). In front is the trainer. TCDT includes emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

STS-110 M.S. Ross and Smith in M-113 personnel carrier during TCDT

NASA Technical Reports Server (NTRS)

2002-01-01

KENNEDY SPACE CENTER, FLA. -- With STS-110 Mission Specialists Jerry Ross (far left) and Steven Smith (third from left) on board, Commander Michael Bloomfield scatters dust as he practices driving the M-113 armored personnel carrier. The driving is part of Terminal Countdown Demonstration Test activities, which include emergency egress training and a simulated launch countdown. The TCDT is held at KSC prior to each Space Shuttle flight. Scheduled for launch April 4, the 11-day mission will feature Shuttle Atlantis docking with the International Space Station (ISS) and delivering the S0 truss, the centerpiece-segment of the primary truss structure that will eventually extend over 300 feet.

PharmDock: a pharmacophore-based docking program

PubMed Central

2014-01-01

Background Protein-based pharmacophore models are enriched with the information of potential interactions between ligands and the protein target. We have shown in a previous study that protein-based pharmacophore models can be applied for ligand pose prediction and pose ranking. In this publication, we present a new pharmacophore-based docking program PharmDock that combines pose sampling and ranking based on optimized protein-based pharmacophore models with local optimization using an empirical scoring function. Results Tests of PharmDock on ligand pose prediction, binding affinity estimation, compound ranking and virtual screening yielded comparable or better performance to existing and widely used docking programs. The docking program comes with an easy-to-use GUI within PyMOL. Two features have been incorporated in the program suite that allow for user-defined guidance of the docking process based on previous experimental data. Docking with those features demonstrated superior performance compared to unbiased docking. Conclusion A protein pharmacophore-based docking program, PharmDock, has been made available with a PyMOL plugin. PharmDock and the PyMOL plugin are freely available from http://people.pharmacy.purdue.edu/~mlill/software/pharmdock. PMID:24739488

An Automated Strategy for Binding-Pose Selection and Docking Assessment in Structure-Based Drug Design.

PubMed

Ballante, Flavio; Marshall, Garland R

2016-01-25

Molecular docking is a widely used technique in drug design to predict the binding pose of a candidate compound in a defined therapeutic target. Numerous docking protocols are available, each characterized by different search methods and scoring functions, thus providing variable predictive capability on a same ligand-protein system. To validate a docking protocol, it is necessary to determine a priori the ability to reproduce the experimental binding pose (i.e., by determining the docking accuracy (DA)) in order to select the most appropriate docking procedure and thus estimate the rate of success in docking novel compounds. As common docking programs use generally different root-mean-square deviation (RMSD) formulas, scoring functions, and format results, it is both difficult and time-consuming to consistently determine and compare their predictive capabilities in order to identify the best protocol to use for the target of interest and to extrapolate the binding poses (i.e., best-docked (BD), best-cluster (BC), and best-fit (BF) poses) when applying a given docking program over thousands/millions of molecules during virtual screening. To reduce this difficulty, two new procedures called Clusterizer and DockAccessor have been developed and implemented for use with some common and "free-for-academics" programs such as AutoDock4, AutoDock4(Zn), AutoDock Vina, DOCK, MpSDockZn, PLANTS, and Surflex-Dock to automatically extrapolate BD, BC, and BF poses as well as to perform consistent cluster and DA analyses. Clusterizer and DockAccessor (code available over the Internet) represent two novel tools to collect computationally determined poses and detect the most predictive docking approach. Herein an application to human lysine deacetylase (hKDAC) inhibitors is illustrated.

InterEvDock2: an expanded server for protein docking using evolutionary and biological information from homology models and multimeric inputs.

PubMed

Quignot, Chloé; Rey, Julien; Yu, Jinchao; Tufféry, Pierre; Guerois, Raphaël; Andreani, Jessica

2018-05-08

Computational protein docking is a powerful strategy to predict structures of protein-protein interactions and provides crucial insights for the functional characterization of macromolecular cross-talks. We previously developed InterEvDock, a server for ab initio protein docking based on rigid-body sampling followed by consensus scoring using physics-based and statistical potentials, including the InterEvScore function specifically developed to incorporate co-evolutionary information in docking. InterEvDock2 is a major evolution of InterEvDock which allows users to submit input sequences - not only structures - and multimeric inputs and to specify constraints for the pairwise docking process based on previous knowledge about the interaction. For this purpose, we added modules in InterEvDock2 for automatic template search and comparative modeling of the input proteins. The InterEvDock2 pipeline was benchmarked on 812 complexes for which unbound homology models of the two partners and co-evolutionary information are available in the PPI4DOCK database. InterEvDock2 identified a correct model among the top 10 consensus in 29% of these cases (compared to 15-24% for individual scoring functions) and at least one correct interface residue among 10 predicted in 91% of these cases. InterEvDock2 is thus a unique protein docking server, designed to be useful for the experimental biology community. The InterEvDock2 web interface is available at http://bioserv.rpbs.univ-paris-diderot.fr/services/InterEvDock2/.

78 FR 42583 - Data Collection Available for Public Comments

Federal Register 2010, 2011, 2012, 2013, 2014

2013-07-16

... the parishes/counties that were Presidential declared disaster area as a results of Hurricanes Katrina... and lender oversight. Description of Respondents: Small Businesses devastated by Hurricanes Katrina...

77 FR 6622 - Environmental Impact Statement: Caddo Parish, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2012-02-08

.... Carl M. Highsmith, Project Delivery Team Leader, Louisiana Division, Federal Highway Administration....I49shreveport.com . SUPPLEMENTARY INFORMATION: The FHWA, in cooperation with the Louisiana Department of...

State Regulation, Family Breakdown, and Lone Motherhood

PubMed Central

Meek, Jeff

2014-01-01

Using a range of parish records, records from the Registrar General of Scotland, charity organizations, and media reports, this article contributes to the historiography which evaluates the effects of World War I in Britain as well as the history of lone mothers and their children. It highlights how during the war, women, especially lone mothers, made significant gains through the welfare system, changing approaches to illegitimacy and the plentiful nature of women’s work but also how in doing so this brought them under greater surveillance by the state, local parishes, and charity organizations. Moreover, as this article will demonstrate, many of the gains made by women were short-lived and in fact the war contributed to high levels of family breakdown and gendered and intergenerational poverty endured by lone mothers and their children. PMID:26538794

Nursing care in postwar Madrid.

PubMed

Chamorro Rebollo, Elena; Siles González, José; Díaz Pérez, Cristina; Álvarez López, Oscar

2016-06-01

To describe the work of the Salus Infirmorum Sisterhood in caring for the most underprivileged individuals from the postwar outskirts of Madrid, through the voluntary service of the nurses who were part of that Institution. A historical study based on the analysis of primary sources from the Sisterhood's archives. Salus Infirmorum once relied on more than 100 volunteer nurses who treated over 425-thousand people in 21 parish dispensaries located within the neediest neighborhoods of Madrid, providing both preventative and curative medical care. Nurses were offered adequate training in exchange for the care provided. Salus Infirmorum took healthcare to the streets of Madrid, treating patients in improvised medical clinics set up in parishes or in the patient's own home, as the situation required, in addition to training women who otherwise would not have had access to it.

Osteopilus septentrionalis (Cuban treefrog)

USGS Publications Warehouse

Glorioso, Brad M.; Steece, Aaron; Lemann, Zachary K.; Lazare, Remy; Beck, James W.

2016-01-01

USA: LOUISIANA: St. Tammany Parish: on private property on Allen Road in Slidell (ca. 30.262°N, 89.741°W; WGS 84). 2 April 2013. Aaron Steece. Verified by Hardin Waddle. Florida Museum of Natural History (UF 177727, photo voucher). New parish record. This adult was found ca. 2 m high on a branch at the edge of a wooded area behind a house. It was photographed and released, as the species identity and significance was unknown. The origin of this individual is unknown. The homeowner stated that he bought nursery plants often, but checked them thoroughly as he put them indoors. Since this initial finding, the homeowner learned more about Cuban Treefrogs and searched for them on many occasions at this location for two years, but detected no additional Cuban Treefrogs.

Simulation of groundwater flow in the "1,500-foot" sand and "2,000-foot" sand and movement of saltwater in the "2,000-foot" sand of the Baton Rouge area, Louisiana

USGS Publications Warehouse

Heywood, Charles E.; Griffith, Jason M.

2013-01-01

Groundwater withdrawals have caused saltwater to encroach into freshwater-bearing aquifers beneath Baton Rouge, Louisiana. Groundwater investigations in the 1960s identified a freshwater-saltwater interface located at the Baton Rouge Fault, across which abrupt changes in water levels occur. Aquifers south of the fault generally contain saltwater, and aquifers north of the fault contain freshwater, though limited saltwater encroachment has been detected within 7 of the 10 aquifers north of the fault. The 10 aquifers beneath the Baton Rouge area, which includes East and West Baton Rouge Parishes, Pointe Coupee Parish, and East and West Feliciana Parishes, provided about 167 million gallons per day (Mgal/day) for public supply and industrial use in 2010. Groundwater withdrawals from an aquifer that is 2,000-feet (ft) deep in East Baton Rouge Parish (the “2,000-foot” sand of the Baton Rouge area) have caused water-level drawdown up to 356 ft and induced saltwater movement northward across the fault. Groundwater withdrawals from the “2,000-foot” sand averaged 23.9 Mgal/d during 2010. Saltwater encroachment threatens wells that are located about 3 miles north of the fault, where industrial withdrawals account for about 66 percent of the water withdrawn from the “2,000-foot” sand in East Baton Rouge Parish. Constant and variable-density groundwater models were developed with the MODFLOW and SEAWAT groundwater modeling codes to evaluate strategies to control saltwater migration, including changes in the distribution of groundwater withdrawals and installation of “scavenger” wells to intercept saltwater before it reaches existing production wells. Five hypothetical scenarios simulated the effects of different groundwater withdrawal options on groundwater levels within the “1,500-foot” sand and the “2,000-foot” sand and the transport of saltwater within the “2,000-foot” sand. Scenario 1 is considered a base case for comparison to the other four scenarios and simulates continuation of 2007 reported groundwater withdrawals. Scenario 2 simulates discontinuation of withdrawals from seven selected industrial wells located in the northwest corner of East Baton Rouge Parish, and water levels within the “1,500-foot” sand were predicted to be about 15 to 20 ft higher under this withdrawal scenario than under scenario 1. Scenario 3 simulates the effects of a scavenger well, which withdraws water from the base of the “2,000-foot” sand at a rate of 2 Mgal/d, at two possible locations on water levels and concentrations within the “2,000-foot” sand. In comparison to the concentrations simulated in scenario 1, operation of the scavenger well in the locations specified in scenario 3 reduces the chloride concentrations at all existing chloride-observation well locations. Scenario 4 simulates a 3.6 Mgal/d reduction in total groundwater withdrawals from selected wells screened in the “2,000-foot” sand that are located in the Baton Rouge industrial district. For scenario 4, the median and mean plume concentrations are slightly lower than scenario 1. Scenario 5 simulates the effect of total cessation of groundwater withdrawals from the “2,000-foot” sand in the industrial district. The simulated chloride-concentration distribution in scenario 5 reflects the change in groundwater flow direction. Although some saltwater would continue to cross the Baton Rouge Fault and encroach toward municipal supply wells, further encroachment toward the industrial district would be abated.

1. Historic American Buildings Survey Lester Jones, Photographer February 28, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Historic American Buildings Survey Lester Jones, Photographer February 28, 1940 SLAVE HOSPITAL FROM THE SOUTHWEST - Melrose Plantation, Slave Hospital, State Highway 119, Melrose, Natchitoches Parish, LA

32 CFR 239.9 - Application Processing Procedures.

Code of Federal Regulations, 2010 CFR

2010-07-01

... the CoreLogic trend report to determine the eligibility of an applicant's county, city, or parish. (ii... appropriate and applicants receive deserved benefit payments. (i) Trend indications of applicants' county...

F2Dock: Fast Fourier Protein-Protein Docking

PubMed Central

Bajaj, Chandrajit; Chowdhury, Rezaul; Siddavanahalli, Vinay

2009-01-01

The functions of proteins is often realized through their mutual interactions. Determining a relative transformation for a pair of proteins and their conformations which form a stable complex, reproducible in nature, is known as docking. It is an important step in drug design, structure determination and understanding function and structure relationships. In this paper we extend our non-uniform fast Fourier transform docking algorithm to include an adaptive search phase (both translational and rotational) and thereby speed up its execution. We have also implemented a multithreaded version of the adaptive docking algorithm for even faster execution on multicore machines. We call this protein-protein docking code F2Dock (F2 = Fast Fourier). We have calibrated F2Dock based on an extensive experimental study on a list of benchmark complexes and conclude that F2Dock works very well in practice. Though all docking results reported in this paper use shape complementarity and Coulombic potential based scores only, F2Dock is structured to incorporate Lennard-Jones potential and re-ranking docking solutions based on desolvation energy. PMID:21071796

Ligand-biased ensemble receptor docking (LigBEnD): a hybrid ligand/receptor structure-based approach

NASA Astrophysics Data System (ADS)

Lam, Polo C.-H.; Abagyan, Ruben; Totrov, Maxim

2018-01-01

Ligand docking to flexible protein molecules can be efficiently carried out through ensemble docking to multiple protein conformations, either from experimental X-ray structures or from in silico simulations. The success of ensemble docking often requires the careful selection of complementary protein conformations, through docking and scoring of known co-crystallized ligands. False positives, in which a ligand in a wrong pose achieves a better docking score than that of native pose, arise as additional protein conformations are added. In the current study, we developed a new ligand-biased ensemble receptor docking method and composite scoring function which combine the use of ligand-based atomic property field (APF) method with receptor structure-based docking. This method helps us to correctly dock 30 out of 36 ligands presented by the D3R docking challenge. For the six mis-docked ligands, the cognate receptor structures prove to be too different from the 40 available experimental Pocketome conformations used for docking and could be identified only by receptor sampling beyond experimentally explored conformational subspace.

Internalization and desensitization of the human glucose-dependent-insulinotropic receptor is affected by N-terminal acetylation of the agonist.

PubMed

Ismail, Sadek; Dubois-Vedrenne, Ingrid; Laval, Marie; Tikhonova, Irina G; D'Angelo, Romina; Sanchez, Claire; Clerc, Pascal; Gherardi, Marie-Julie; Gigoux, Véronique; Magnan, Remi; Fourmy, Daniel

2015-10-15

How incretins regulate presence of their receptors at the cell surface and their activity is of paramount importance for the development of therapeutic strategies targeting these receptors. We have studied internalization of the human Glucose-Insulinotropic Polypeptide receptor (GIPR). GIP stimulated rapid robust internalization of the GIPR, the major part being directed to lysosomes. GIPR internalization involved mainly clathrin-coated pits, AP-2 and dynamin. However, neither GIPR C-terminal region nor β-arrestin1/2 was required. Finally, N-acetyl-GIP recognized as a dipeptidyl-IV resistant analogue, fully stimulated cAMP production with a ∼15-fold lower potency than GIP and weakly stimulated GIPR internalization and desensitization of cAMP response. Furthermore, docking N-acetyl-GIP in the binding site of modeled GIPR showed slighter interactions with residues of helices 6 and 7 of GIPR compared to GIP. Therefore, incomplete or partial activity of N-acetyl-GIP on signaling involved in GIPR desensitization and internalization contributes to the enhanced incretin activity of this peptide. Copyright © 2015. Published by Elsevier Ireland Ltd.

The brown adipocyte protein CIDEA promotes lipid droplet fusion via a phosphatidic acid-binding amphipathic helix

PubMed Central

Barneda, David; Planas-Iglesias, Joan; Gaspar, Maria L; Mohammadyani, Dariush; Prasannan, Sunil; Dormann, Dirk; Han, Gil-Soo; Jesch, Stephen A; Carman, George M; Kagan, Valerian; Parker, Malcolm G; Ktistakis, Nicholas T; Klein-Seetharaman, Judith; Dixon, Ann M; Henry, Susan A; Christian, Mark

2015-01-01

Maintenance of energy homeostasis depends on the highly regulated storage and release of triacylglycerol primarily in adipose tissue, and excessive storage is a feature of common metabolic disorders. CIDEA is a lipid droplet (LD)-protein enriched in brown adipocytes promoting the enlargement of LDs, which are dynamic, ubiquitous organelles specialized for storing neutral lipids. We demonstrate an essential role in this process for an amphipathic helix in CIDEA, which facilitates embedding in the LD phospholipid monolayer and binds phosphatidic acid (PA). LD pairs are docked by CIDEA trans-complexes through contributions of the N-terminal domain and a C-terminal dimerization region. These complexes, enriched at the LD–LD contact site, interact with the cone-shaped phospholipid PA and likely increase phospholipid barrier permeability, promoting LD fusion by transference of lipids. This physiological process is essential in adipocyte differentiation as well as serving to facilitate the tight coupling of lipolysis and lipogenesis in activated brown fat. DOI: http://dx.doi.org/10.7554/eLife.07485.001 PMID:26609809

Molecular docking.

PubMed

Morris, Garrett M; Lim-Wilby, Marguerita

2008-01-01

Molecular docking is a key tool in structural molecular biology and computer-assisted drug design. The goal of ligand-protein docking is to predict the predominant binding mode(s) of a ligand with a protein of known three-dimensional structure. Successful docking methods search high-dimensional spaces effectively and use a scoring function that correctly ranks candidate dockings. Docking can be used to perform virtual screening on large libraries of compounds, rank the results, and propose structural hypotheses of how the ligands inhibit the target, which is invaluable in lead optimization. The setting up of the input structures for the docking is just as important as the docking itself, and analyzing the results of stochastic search methods can sometimes be unclear. This chapter discusses the background and theory of molecular docking software, and covers the usage of some of the most-cited docking software.

Final Determination - signed October 16, 1985

EPA Pesticide Factsheets

Fianl Determination of the U.S. EPA's Assistant Administrator for External Affairs concerning the Bayou Aux Carpes site in Jefferson Parish, Louisiana pursuant to Section 404(c) of the Clean Water Act.

Is It Reliable to Take the Molecular Docking Top Scoring Position as the Best Solution without Considering Available Structural Data?

PubMed

Ramírez, David; Caballero, Julio

2018-04-28

Molecular docking is the most frequently used computational method for studying the interactions between organic molecules and biological macromolecules. In this context, docking allows predicting the preferred pose of a ligand inside a receptor binding site. However, the selection of the “best” solution is not a trivial task, despite the widely accepted selection criterion that the best pose corresponds to the best energy score. Here, several rigid-target docking methods were evaluated on the same dataset with respect to their ability to reproduce crystallographic binding orientations, to test if the best energy score is a reliable criterion for selecting the best solution. For this, two experiments were performed: (A) to reconstruct the ligand-receptor complex by performing docking of the ligand in its own crystal structure receptor (defined as self-docking), and (B) to reconstruct the ligand-receptor complex by performing docking of the ligand in a crystal structure receptor that contains other ligand (defined as cross-docking). Root-mean square deviation (RMSD) was used to evaluate how different the obtained docking orientation is from the corresponding co-crystallized pose of the same ligand molecule. We found that docking score function is capable of predicting crystallographic binding orientations, but the best ranked solution according to the docking energy is not always the pose that reproduces the experimental binding orientation. This happened when self-docking was achieved, but it was critical in cross-docking. Taking into account that docking is typically used with predictive purposes, during cross-docking experiments, our results indicate that the best energy score is not a reliable criterion to select the best solution in common docking applications. It is strongly recommended to choose the best docking solution according to the scoring function along with additional structural criteria described for analogue ligands to assure the selection of a correct docking solution.

Structural insights into the human RyR2 N-terminal region involved in cardiac arrhythmias

DOE Office of Scientific and Technical Information (OSTI.GOV)

Borko, Ľubomír; Bauerová-Hlinková, Vladena, E-mail: vladena.bauerova@savba.sk; Hostinová, Eva

2014-11-01

X-ray and solution structures of the human RyR2 N-terminal region were obtained under near-physiological conditions. The structure exhibits a unique network of interactions between its three domains, revealing an important stabilizing role of the central helix. Human ryanodine receptor 2 (hRyR2) mediates calcium release from the sarcoplasmic reticulum, enabling cardiomyocyte contraction. The N-terminal region of hRyR2 (amino acids 1–606) is the target of >30 arrhythmogenic mutations and contains a binding site for phosphoprotein phosphatase 1. Here, the solution and crystal structures determined under near-physiological conditions, as well as a homology model of the hRyR2 N-terminal region, are presented. The N-terminusmore » is held together by a unique network of interactions among its three domains, A, B and C, in which the central helix (amino acids 410–437) plays a prominent stabilizing role. Importantly, the anion-binding site reported for the mouse RyR2 N-terminal region is notably absent from the human RyR2. The structure concurs with the differential stability of arrhythmogenic mutations in the central helix (R420W, I419F and I419F/R420W) which are owing to disparities in the propensity of mutated residues to form energetically favourable or unfavourable contacts. In solution, the N-terminus adopts a globular shape with a prominent tail that is likely to involve residues 545–606, which are unresolved in the crystal structure. Docking the N-terminal domains into cryo-electron microscopy maps of the closed and open RyR1 conformations reveals C{sup α} atom movements of up to 8 Å upon channel gating, and predicts the location of the leucine–isoleucine zipper segment and the interaction site for spinophilin and phosphoprotein phosphatase 1 on the RyR surface.« less

Production of ACE inhibitory peptides from sweet sorghum grain protein using alcalase: Hydrolysis kinetic, purification and molecular docking study.

PubMed

Wu, Qiongying; Du, Jinjuan; Jia, Junqiang; Kuang, Cong

2016-05-15

In this study, sweet sorghum grain protein (SSGP) was hydrolyzed using alcalase yielding ACE inhibitory peptides. A kinetic model was proposed to describe the enzymolysis process of SSGP. The kinetic parameters, a and b, were determined according to experimental data. It was found that the model was reliable to describe the kinetic behaviour for SSGP hydrolysis by alcalase. After hydrolysis, the SSGP hydrolysate with DH of 19% exhibited the strongest ACE inhibitory activity and the hydrolysate was then used to isolate ACE inhibitory peptides. A novel ACE inhibitory peptide was successfully purified from this hydrolysate by ultrafiltration, ion exchange chromatography, gel filtration chromatography, and reversed-phased high performance liquid chromatography (RP-HPLC). The amino acid sequence of the purified peptide was identified as Thr-Leu-Ser (IC50=102.1 μM). The molecular docking studies revealed that the ACE inhibition of the tripeptide was mainly attributed to its C-terminal Ser, which can effectively interact with the S1 and S2 pockets of ACE. Our studies suggest that the tripeptide from the SSGP hydrolysate can be utilized to develop functional food ingredients or pharmaceuticals for prevention of hypertension. Copyright © 2015 Elsevier Ltd. All rights reserved.

STS-81 CREW DURING SAFETY EQUIPMENT DEMONSTRATION AT LC 39B DURING TCDT

NASA Technical Reports Server (NTRS)

1996-01-01

The STS-81 crew gets a description of safety equipment and emergency egress routes on Launch Pad 39B during Terminal Countdown Demonstration Test (TCDT) exercises for that mission. They are (from left): Mission Specialists Marsha S. Ivins, J.M. 'Jerry' Linenger and Peter J. K. 'Jeff' Wisoff; Mission Commander Michael A. Baker; Mission Specialist John M. Grunsfeld; and Pilot Brent W. Jett, Jr. STS-81 is the fifth Shuttle-Mir docking mission and will feature the transfer of Linenger to Mir to replace astronaut John Blaha, who has been on the orbital laboratory since Sept. 19 after arrival there during the STS-79 mission. During STS-81, Shuttle and Mir crews will conduct risk mitigation, human life science, microgravity and materials processing experiments that will provide data for the design, development and operation of the International Space Station. The primary payload is the SPACEHAB-DM double module will provide space for more than 2,000 pounds of hardware, food and water that will be transferred into the Russian space station during five days of docking operations during the 10-day mission. The SPACEHAB will also be used to return experiment samples from the Mir to Earth for analysis and for microgravity experiments during the mission.

An atomistic view of Hsp70 allosteric crosstalk: from the nucleotide to the substrate binding domain and back

PubMed Central

Chiappori, Federica; Merelli, Ivan; Milanesi, Luciano; Colombo, Giorgio; Morra, Giulia

2016-01-01

The Hsp70 is an allosterically regulated family of molecular chaperones. They consist of two structural domains, NBD and SBD, connected by a flexible linker. ATP hydrolysis at the NBD modulates substrate recognition at the SBD, while peptide binding at the SBD enhances ATP hydrolysis. In this study we apply Molecular Dynamics (MD) to elucidate the molecular determinants underlying the allosteric communication from the NBD to the SBD and back. We observe that local structural and dynamical modulation can be coupled to large-scale rearrangements, and that different combinations of ligands at NBD and SBD differently affect the SBD domain mobility. Substituting ADP with ATP in the NBD induces specific structural changes involving the linker and the two NBD lobes. Also, a SBD-bound peptide drives the linker docking by increasing the local dynamical coordination of its C-terminal end: a partially docked DnaK structure is achieved by combining ATP in the NBD and peptide in the SBD. We propose that the MD-based analysis of the inter domain dynamics and structure modulation could be used as a tool to computationally predict the allosteric behaviour and functional response of Hsp70 upon introducing mutations or binding small molecules, with potential applications for drug discovery. PMID:27025773

Six degree of freedom FORTRAN program, ASTP docking dynamics, users guide

NASA Technical Reports Server (NTRS)

Mount, G. O., Jr.; Mikhalkin, B.

1974-01-01

The digital program ASTP Docking Dynamics as outlined is intended to aid the engineer using the program to determine the docking system loads and attendant vehicular motion resulting from docking two vehicles that have an androgynous, six-hydraulic-attenuator, guide ring, docking interface similar to that designed for the Apollo/Soyuz Test Project (ASTP). This program is set up to analyze two different vehicle combinations: the Apollo CSM docking to Soyuz and the shuttle orbiter docking to another orbiter. The subroutine modifies the vehicle control systems to describe one or the other vehicle combinations; the rest of the vehicle characteristics are changed by input data. To date, the program has been used to predict and correlate ASTP docking loads and performance with docking test program results from dynamic testing. The program modified for use on IBM 360 computers. Parts of the original docking system equations in the areas of hydraulic damping and capture latches are modified to better describe the detail design of the ASTP docking system.

Replica Exchange Improves Sampling in Low-Resolution Docking Stage of RosettaDock

PubMed Central

Zhang, Zhe; Lange, Oliver F.

2013-01-01

Many protein-protein docking protocols are based on a shotgun approach, in which thousands of independent random-start trajectories minimize the rigid-body degrees of freedom. Another strategy is enumerative sampling as used in ZDOCK. Here, we introduce an alternative strategy, ReplicaDock, using a small number of long trajectories of temperature replica exchange. We compare replica exchange sampling as low-resolution stage of RosettaDock with RosettaDock's original shotgun sampling as well as with ZDOCK. A benchmark of 30 complexes starting from structures of the unbound binding partners shows improved performance for ReplicaDock and ZDOCK when compared to shotgun sampling at equal or less computational expense. ReplicaDock and ZDOCK consistently reach lower energies and generate significantly more near-native conformations than shotgun sampling. Accordingly, they both improve typical metrics of prediction quality of complex structures after refinement. Additionally, the refined ReplicaDock ensembles reach significantly lower interface energies and many previously hidden features of the docking energy landscape become visible when ReplicaDock is applied. PMID:24009670

Structural simulation of adenosine phosphate via plumbagin and zoledronic acid competitively targets JNK/Erk to synergistically attenuate osteoclastogenesis in a breast cancer model

PubMed Central

Qiao, H; Wang, T-y; Yu, Z-f; Han, X-g; Liu, X-q; Wang, Y-g; Fan, Q-m; Qin, A; Tang, T-t

2016-01-01

The treatment of breast cancer-induced osteolysis remains a challenge in clinical settings. Here, we explored the effect and mechanism of combined treatment with zoledronic acid (ZA) and plumbagin (PL), a widely investigated component derived from Plumbago zeylanica, against breast cancer-induced osteoclastogenesis. We found that the combined treatment with PL and ZA suppressed cell viability of precursor osteoclasts and synergistically inhibited MDA-MB-231-induced osteoclast formation (combination index=0.28) with the abrogation of recombinant mouse receptor activator of nuclear factor-κB ligand (RANKL)-induced activation of NF-κB/MAPK (nuclear factor-κB/mitogen-activated protein kinase) pathways. Molecular docking suggested a putative binding area within c-Jun N-terminal kinase/extracellular signal-regulated kinase (JNK/Erk) protease active sites through the structural mimicking of adenosine phosphate (ANP) by the spatial combination of PL with ZA. A homogeneous time-resolved fluorescence assay further illustrated the direct competitiveness of the dual drugs against ANP docking to phosphorylated JNK/Erk, contributing to the inhibited downstream expression of c-Jun/c-Fos/NFATc-1 (nuclear factor of activated T cells, cytoplasmic, calcineurin-dependent 1). Then, in vivo testing demonstrated that the combined administration of PL and ZA attenuated breast cancer growth in the bone microenvironment. Additionally, these molecules prevented the destruction of proximal tibia, with significant reduction of tartrate-resistant acid phosphatase (TRAcP)-positive osteoclast cells and potentiation of apoptotic cancer cells, to a greater extent when combined than when the drugs were applied independently. Altogether, the combination treatment with PL and ZA could significantly and synergistically suppress osteoclastogenesis and inhibit tumorigenesis both in vitro and in vivo by simulating the spatial structure of ANP to inhibit competitively phosphorylation of c-Jun N-terminal kinase/extracellular signal-regulated kinase (JNK/Erk). PMID:26866274

Satellite Docking Simulator with Generic Contact Dynamics Capabilities

NASA Astrophysics Data System (ADS)

Ma, O.; Crabtree, D.; Carr, R.; Gonthier, Y.; Martin, E.; Piedboeuf, J.-C.

2002-01-01

Satellite docking (and capture) systems are critical for the servicing or salvage of satellites. Satellite servicing has comparatively recently become a realistic and promising space operation/mission. Satellite servicing includes several of the following operations: rendezvous; docking (capturing); inspection; towing (transporting); refueling; refurbishing (replacement of faulty or "used-up" modules/boxes); and un-docking (releasing). Because spacecraft servicing has been, until recently non-feasible or non-economical, spacecraft servicing technology has been neglected. Accordingly, spacecraft designs have featured self- contained systems without consideration for operational servicing. Consistent with this view, most spacecrafts were designed and built without docking interfaces. If, through some mishap, a spacecraft was rendered non-operational, it was simply considered expendable. Several feasibility studies are in progress on salvaging stranded satellites (which, in fact had led to this project). The task of the designer of the docking system for a salvaging task is difficult. He/she has to work with whatever it is on orbit, and this excludes any special docking interfaces, which might have made his/her task easier. As satellite servicing becomes an accepted design requirement, many future satellites will be equipped with appropriate docking interfaces. The designer of docking systems will be faced with slightly different challenges: reliable, cost-effective, docking (and re-supply) systems. Thus, the role of designers of docking systems will increase from one of a kind, ad-hoc interfaces intended for salvaging operations, to docking systems for satellites and "caretaker" spacecraft which are meant for servicing and are produced in larger numbers. As in any space system (for which full and representative ground hardware test-beds are very expensive and often impossible to develop), simulations are mandatory for the development of systems and operations for satellite servicing. Simulations are also instrumental in concept studies during proposals and early development stages. Finally, simulations are useful during the operational phase of satellite servicing: improving the operational procedures; training ground operators; command and control, etc. Hence the need exists for a Satellite Servicing Simulator, which will support a project throughout its lifecycle. The paper addresses a project to develop a Simulink-based Satellite Docking Simulator (SDS) with generic Contact Dynamics (CD) capabilities. The simulator is intended to meet immediate practical demands for development of complex docking systems and operations at MD Robotics. The docking phase is the most critical and complex phase of the entire servicing sequence, and without docking there is no servicing. Docking mechanisms are often quite complex, especially when built to dock with a satellite manufactured without special docking interfaces. For successful docking operations, the design of a docking system must take into consideration: complexity of 3D geometric shapes defining the contact interfaces; sophistication of the docking mechanism; friction and stiction at the contacting surfaces; compliance (stiffness) and damping, in all axes; positional (translation and rotation) misalignments and relative velocities, in all axes; inertial properties of the docking satellites (including their distribution); complexity of the drive mechanisms and control sub-systems for the overall docking system; fully autonomous or tele-operated docking from the ground; etc. The docking simulator, which makes use of the proven Contact Dynamics Toolkit (CDT) developed by MD Robotics, is thus practically indispensable for the docking system designer. The use of the simulator could greatly reduce the prototyping and development time of a docking interface. A special feature of the simulator, which required an update of CDT, is variable step-size integration. This new capability permits increases in speed to accomplish all the simulation tasks.

BP-Dock: A Flexible Docking Scheme for Exploring Protein–Ligand Interactions Based on Unbound Structures

PubMed Central

Bolia, Ashini; Gerek, Z. Nevin; Ozkan, S. Banu

2016-01-01

Molecular docking serves as an important tool in modeling protein–ligand interactions. However, it is still challenging to incorporate overall receptor flexibility, especially backbone flexibility, in docking due to the large conformational space that needs to be sampled. To overcome this problem, we developed a novel flexible docking approach, BP-Dock (Backbone Perturbation-Dock) that can integrate both backbone and side chain conformational changes induced by ligand binding through a multi-scale approach. In the BP-Dock method, we mimic the nature of binding-induced events as a first-order approximation by perturbing the residues along the protein chain with a small Brownian kick one at a time. The response fluctuation profile of the chain upon these perturbations is computed using the perturbation response scanning method. These response fluctuation profiles are then used to generate binding-induced multiple receptor conformations for ensemble docking. To evaluate the performance of BP-Dock, we applied our approach on a large and diverse data set using unbound structures as receptors. We also compared the BP-Dock results with bound and unbound docking, where overall receptor flexibility was not taken into account. Our results highlight the importance of modeling backbone flexibility in docking for recapitulating the experimental binding affinities, especially when an unbound structure is used. With BP-Dock, we can generate a wide range of binding site conformations realized in nature even in the absence of a ligand that can help us to improve the accuracy of unbound docking. We expect that our fast and efficient flexible docking approach may further aid in our understanding of protein–ligand interactions as well as virtual screening of novel targets for rational drug design. PMID:24380381

DockRank: Ranking docked conformations using partner-specific sequence homology-based protein interface prediction

PubMed Central

Xue, Li C.; Jordan, Rafael A.; EL-Manzalawy, Yasser; Dobbs, Drena; Honavar, Vasant

2015-01-01

Selecting near-native conformations from the immense number of conformations generated by docking programs remains a major challenge in molecular docking. We introduce DockRank, a novel approach to scoring docked conformations based on the degree to which the interface residues of the docked conformation match a set of predicted interface residues. Dock-Rank uses interface residues predicted by partner-specific sequence homology-based protein–protein interface predictor (PS-HomPPI), which predicts the interface residues of a query protein with a specific interaction partner. We compared the performance of DockRank with several state-of-the-art docking scoring functions using Success Rate (the percentage of cases that have at least one near-native conformation among the top m conformations) and Hit Rate (the percentage of near-native conformations that are included among the top m conformations). In cases where it is possible to obtain partner-specific (PS) interface predictions from PS-HomPPI, DockRank consistently outperforms both (i) ZRank and IRAD, two state-of-the-art energy-based scoring functions (improving Success Rate by up to 4-fold); and (ii) Variants of DockRank that use predicted interface residues obtained from several protein interface predictors that do not take into account the binding partner in making interface predictions (improving success rate by up to 39-fold). The latter result underscores the importance of using partner-specific interface residues in scoring docked conformations. We show that DockRank, when used to re-rank the conformations returned by ClusPro, improves upon the original ClusPro rankings in terms of both Success Rate and Hit Rate. DockRank is available as a server at http://einstein.cs.iastate.edu/DockRank/. PMID:23873600

DockRank: ranking docked conformations using partner-specific sequence homology-based protein interface prediction.

PubMed

Xue, Li C; Jordan, Rafael A; El-Manzalawy, Yasser; Dobbs, Drena; Honavar, Vasant

2014-02-01

Selecting near-native conformations from the immense number of conformations generated by docking programs remains a major challenge in molecular docking. We introduce DockRank, a novel approach to scoring docked conformations based on the degree to which the interface residues of the docked conformation match a set of predicted interface residues. DockRank uses interface residues predicted by partner-specific sequence homology-based protein-protein interface predictor (PS-HomPPI), which predicts the interface residues of a query protein with a specific interaction partner. We compared the performance of DockRank with several state-of-the-art docking scoring functions using Success Rate (the percentage of cases that have at least one near-native conformation among the top m conformations) and Hit Rate (the percentage of near-native conformations that are included among the top m conformations). In cases where it is possible to obtain partner-specific (PS) interface predictions from PS-HomPPI, DockRank consistently outperforms both (i) ZRank and IRAD, two state-of-the-art energy-based scoring functions (improving Success Rate by up to 4-fold); and (ii) Variants of DockRank that use predicted interface residues obtained from several protein interface predictors that do not take into account the binding partner in making interface predictions (improving success rate by up to 39-fold). The latter result underscores the importance of using partner-specific interface residues in scoring docked conformations. We show that DockRank, when used to re-rank the conformations returned by ClusPro, improves upon the original ClusPro rankings in terms of both Success Rate and Hit Rate. DockRank is available as a server at http://einstein.cs.iastate.edu/DockRank/. Copyright © 2013 Wiley Periodicals, Inc.

ConsDock: A new program for the consensus analysis of protein-ligand interactions.

PubMed

Paul, Nicodème; Rognan, Didier

2002-06-01

Protein-based virtual screening of chemical libraries is a powerful technique for identifying new molecules that may interact with a macromolecular target of interest. Because of docking and scoring limitations, it is more difficult to apply as a lead optimization method because it requires that the docking/scoring tool is able to propose as few solutions as possible and all of them with a very good accuracy for both the protein-bound orientation and the conformation of the ligand. In the present study, we present a consensus docking approach (ConsDock) that takes advantage of three widely used docking tools (Dock, FlexX, and Gold). The consensus analysis of all possible poses generated by several docking tools is performed sequentially in four steps: (i) hierarchical clustering of all poses generated by a docking tool into families represented by a leader; (ii) definition of all consensus pairs from leaders generated by different docking programs; (iii) clustering of consensus pairs into classes, represented by a mean structure; and (iv) ranking the different means starting from the most populated class of consensus pairs. When applied to a test set of 100 protein-ligand complexes from the Protein Data Bank, ConsDock significantly outperforms single docking with respect to the docking accuracy of the top-ranked pose. In 60% of the cases investigated here, ConsDock was able to rank as top solution a pose within 2 A RMSD of the X-ray structure. It can be applied as a postprocessing filter to either single- or multiple-docking programs to prioritize three-dimensional guided lead optimization from the most likely docking solution. Copyright 2002 Wiley-Liss, Inc.

GalaxyDock BP2 score: a hybrid scoring function for accurate protein-ligand docking

NASA Astrophysics Data System (ADS)

Baek, Minkyung; Shin, Woong-Hee; Chung, Hwan Won; Seok, Chaok

2017-07-01

Protein-ligand docking is a useful tool for providing atomic-level understanding of protein functions in nature and design principles for artificial ligands or proteins with desired properties. The ability to identify the true binding pose of a ligand to a target protein among numerous possible candidate poses is an essential requirement for successful protein-ligand docking. Many previously developed docking scoring functions were trained to reproduce experimental binding affinities and were also used for scoring binding poses. However, in this study, we developed a new docking scoring function, called GalaxyDock BP2 Score, by directly training the scoring power of binding poses. This function is a hybrid of physics-based, empirical, and knowledge-based score terms that are balanced to strengthen the advantages of each component. The performance of the new scoring function exhibits significant improvement over existing scoring functions in decoy pose discrimination tests. In addition, when the score is used with the GalaxyDock2 protein-ligand docking program, it outperformed other state-of-the-art docking programs in docking tests on the Astex diverse set, the Cross2009 benchmark set, and the Astex non-native set. GalaxyDock BP2 Score and GalaxyDock2 with this score are freely available at http://galaxy.seoklab.org/softwares/galaxydock.html.

PPI4DOCK: large scale assessment of the use of homology models in free docking over more than 1000 realistic targets.

PubMed

Yu, Jinchao; Guerois, Raphaël

2016-12-15

Protein-protein docking methods are of great importance for understanding interactomes at the structural level. It has become increasingly appealing to use not only experimental structures but also homology models of unbound subunits as input for docking simulations. So far we are missing a large scale assessment of the success of rigid-body free docking methods on homology models. We explored how we could benefit from comparative modelling of unbound subunits to expand docking benchmark datasets. Starting from a collection of 3157 non-redundant, high X-ray resolution heterodimers, we developed the PPI4DOCK benchmark containing 1417 docking targets based on unbound homology models. Rigid-body docking by Zdock showed that for 1208 cases (85.2%), at least one correct decoy was generated, emphasizing the efficiency of rigid-body docking in generating correct assemblies. Overall, the PPI4DOCK benchmark contains a large set of realistic cases and provides new ground for assessing docking and scoring methodologies. Benchmark sets can be downloaded from http://biodev.cea.fr/interevol/ppi4dock/ CONTACT: guerois@cea.frSupplementary information: Supplementary data are available at Bioinformatics online. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

VIEW WEST, 1ST FLOOR, EAST ROOM, HYDRAULIC COTTON PRESS, DETAIL, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

VIEW WEST, 1ST FLOOR, EAST ROOM, HYDRAULIC COTTON PRESS, DETAIL, CONTINENTAL GIN COMPANY HYDRAULIC TANK - Magnolia Plantation, Cotton Gins & Presses, LA Route 119, Natchitoches, Natchitoches Parish, LA

Fungal Diseases: Ringworm Risk & Prevention

MedlinePlus

... H, Parish LC. Manual of Medical Mycology, Blackwell Science, Cambridge 1995. p.36. Wilson EK, Deweber K, Berry JW, Wilckens JH. Cutaneous infections in wrestlers. Sports health 2013;5:423-37. Pecci M, Comeau ...

American & Soviet engineers examine ASTP docking set-up following tests

NASA Image and Video Library

1974-07-10

S74-25394 (10 July 1974) --- A group of American and Soviet engineers of the Apollo-Soyuz Test Project working group three examines an ASTP docking set-up following a docking mechanism fitness test conducted in Building 13 at the Johnson Space Center. Working Group No. 3 is concerned with ASTP docking problems and techniques. The joint U.S.-USSR ASTP docking mission in Earth orbit is scheduled for the summer of 1975. The Apollo docking mechanism is atop the Soyuz docking mechanism.

Early Exposure to General Anesthesia Disrupts Spatial Organization of Presynaptic Vesicles in Nerve Terminals of the Developing Rat Subiculum.

PubMed

Lunardi, N; Oklopcic, A; Prillaman, M; Erisir, A; Jevtovic-Todorovic, V

2015-10-01

Exposure to general anesthesia (GA) during critical stages of brain development induces widespread neuronal apoptosis and causes long-lasting behavioral deficits in numerous animal species. Although several studies have focused on the morphological fate of neurons dying acutely by GA-induced developmental neuroapoptosis, the effects of an early exposure to GA on the surviving synapses remain unclear. The aim of this study is to study whether exposure to GA disrupts the fine regulation of the dynamic spatial organization and trafficking of synaptic vesicles in presynaptic terminals. We exposed postnatal day 7 (PND7) rat pups to a clinically relevant anesthetic combination of midazolam, nitrous oxide, and isoflurane and performed a detailed ultrastructural analysis of the synaptic vesicle architecture at presynaptic terminals in the subiculum of rats at PND 12. In addition to a significant decrease in the density of presynaptic vesicles, we observed a reduction of docked vesicles, as well as a reduction of vesicles located within 100 nm from the active zone, in animals 5 days after an initial exposure to GA. We also found that the synaptic vesicles of animals exposed to GA are located more distally with respect to the plasma membrane than those of sham control animals and that the distance between presynaptic vesicles is increased in GA-exposed animals compared to sham controls. We report that exposure of immature rats to GA during critical stages of brain development causes significant disruption of the strategic topography of presynaptic vesicles within the nerve terminals of the subiculum.

Comparative evaluation of several docking tools for docking small molecule ligands to DC-SIGN.

PubMed

Jug, Gregor; Anderluh, Marko; Tomašič, Tihomir

2015-06-01

Five docking tools, namely AutoDock, FRED, CDOCKER, FlexX and GOLD, have been critically examined, with the aim of selecting those most appropriate for use as docking tools for docking molecules to the lectin dendritic cell-specific intercellular adhesion molecule-3-grabbing non-integrin (DC-SIGN). This lectin has been selected for its rather non-druggable binding site, which enables complex interactions that guide the binding of the core monosaccharide. Since optimal orientation is crucial for forming coordination bonds, it was important to assess whether the selected docking tools could reproduce the optimal binding conformation for several oligosaccharides that are known to bind DC-SIGN. Our results show that even widely used docking programs have certain limitations when faced with a rather shallow and featureless binding site, as is the case of DC-SIGN. The FRED docking software (OpenEye Scientific Software, Inc.) was found to score as the best tool for docking ligands to DC-SIGN. The performance of FRED was further assessed on another lectin, Langerin. We have demonstrated that this validated docking protocol could be used for docking to other lectins similar to DC-SIGN.

65. (Credit JTL) Filter room looking WSW across remodelled New ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

65. (Credit JTL) Filter room looking WSW across remodelled New York horizontal pressure filters (in foreground). - McNeil Street Pumping Station, McNeil Street & Cross Bayou, Shreveport, Caddo Parish, LA

1. Historic American Buildings Survey Samuel Wilson, Jr., Photographer, November ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Historic American Buildings Survey Samuel Wilson, Jr., Photographer, November 30, 1934 VIEW OF TOWER ACROSS BLIND BAY MARSH - Frank's Island Lighthouse, North East Pass, Mississippi River, Boothville, Plaquemines Parish, LA

Local censuses in the 18th century.

PubMed

Law, C M

1969-03-01

Abstract Recent work on the population problems of the eighteenth century has been mainly based on the use of parish records. Another source, and one which, surprisingly, has received little attention is the local census. These are more numerous than is generally realised; and can be of great use in demographic studies. This paper examines 125 local censuses mainly taken in urban areas. They are discussed in terms of how they come to be taken, their reliability, extant manuscript material and their contents. Whilst most of the censuses confine themselves to the basic facts such as total population, number of houses and number of families, some give details of sex, age, marital status and occupation. Generally the information is given for the parish or local administrative unit, but in a few instances it is available by streets.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pi, Min; Kapoor, Karan P.; Ye, Ruisong

The possibility that G protein-coupled receptor family C member A (GPRC6A) is the osteocalcin (Ocn)-sensing G protein-coupled receptor that directly regulates pancreatic β-cell functions is controversial. In the current study, we found that Ocn and an Ocn-derived C-terminal hexapeptide directly activate GPRC6A-dependent ERK signaling in vitro. Computational models probe the structural basis of Ocn binding to GPRC6A and predict that the C-terminal hexapeptide docks to the extracellular side of the transmembrane domain of GPRC6A. Consistent with the modeling, mutations in the computationally identified binding pocket of GPRC6A reduced Ocn and C-terminal hexapeptide activation of this receptor. In addition, selective deletionmore » of Gprc6a in β-cells (Gprc6aβ-cell-cko) by crossing Gprc6aflox/flox mice with Ins2-Cre mice resulted in reduced pancreatic weight, islet number, insulin protein content, and insulin message expression. Both islet size and β-cell proliferation were reduced in Gprc6aβ-cell-cko compared with control mice. Gprc6aβ-cell-cko exhibited abnormal glucose tolerance, but normal insulin sensitivity. Islets isolated from Gprc6aβ-cell-cko mice showed reduced insulin simulation index in response to Ocn. These data establish the structural basis for Ocn direct activation of GPRC6A and confirm a role for GPRC6A in regulating β-cell proliferation and insulin secretion.« less

Endogenous fatty acids in olfactory hairs influence pheromone binding protein structure and function in Lymantria dispar.

PubMed

Nardella, Jason; Terrado, Mailyn; Honson, Nicolette S; Plettner, Erika

2015-08-01

The gypsy moth utilizes a pheromone, (7R,8S)-2-methyl-7,8-epoxyoctadecane, for mate location. The pheromone is detected by sensory hairs (sensilla) on the antennae of adult males. Sensilla contain the dendrites of olfactory neurons bathed in lymph, which contains pheromone binding proteins (PBPs). We have extracted and identified free fatty acids from lymph of sensory hairs, and we demonstrate that these function as endogenous ligands for gypsy moth PBP1 and PBP2. Homology modeling of both PBPs, and docking of fatty acids reveal multiple binding sites: one internal, the others external. Pheromone binding assays suggest that these fatty acids increase PBP-pheromone binding affinity. We show that fatty acid binding causes an increase in α-helix content in the N-terminal domain, but not in the C-terminal peptide of both proteins. The C-terminal peptide was shown to form a α-helix in a hydrophobic, homogeneous environment, but not in the presence of fatty acid micelles. Through partition assays we show that the fatty acids prevent adsorption of the pheromone on hydrophobic surfaces and facilitate pheromone partition into an aqueous phase. We propose that lymph is an emulsion of fatty acids and PBP that influence each other and thereby control the partition equilibria of hydrophobic odorants. Copyright © 2015 Elsevier Inc. All rights reserved.

Improvement of the catalytic performance of a Bispora antennata cellulase by replacing the N-terminal semi-barrel structure.

PubMed

Zheng, Fei; Huang, Huoqing; Wang, Xiaoyu; Tu, Tao; Liu, Qiong; Meng, Kun; Wang, Yuan; Su, Xiaoyun; Xie, Xiangming; Luo, Huiying

2016-10-01

The aim of this work was to study the contribution of the N-terminal structure to cellulase catalytic performance. A wild-type cellulase (BaCel5) of glycosyl hydrolase (GH) family 5 from Bispora antennata and two hybrid enzymes (BaCel5(127) and BaCel5(167)) with replacement of the N-terminal (βα)3 (127 residues) or (βα)4 (167 residues)-barrel with the corresponding sequences of TeEgl5A from Talaromyces emersonii were produced in Pichia pastoris and biochemically characterized. BaCel5 exhibited optimal activity at pH 5.0 and 50°C but had low catalytic efficiency (25.4±0.8mLs(-1)mg(-1)). In contrast, BaCel5(127) and BaCel5(167) showed similar enzymatic properties but improved catalytic performance. When using CMC-Na, barley β-glucan, lichenan, and cellooligosaccharides as substrates, BaCel5(127) and BaCel5(167) had increased specific activities and catalytic efficiencies by ∼1.8-6.7-fold and ∼1.0-4.7-fold, respectively. The catalytic efficiency of BaCel5(167) was even higher than that of parental proteins. The underlying mechanism was analyzed by molecular docking and molecular dynamic simulation. Copyright © 2016 Elsevier Ltd. All rights reserved.

Presynaptic Proteins as Markers of the Neurotoxic Activity of BmjeTX-I and BmjeTX-II Toxins from Bothrops marajoensis (Marajó Lancehead) Snake Venom.

PubMed

Lisboa, Antonio; Melaré, Rodolfo; Franco, Junia R B; Bis, Carolina V; Gracia, Marta; Ponce-Soto, Luis A; Marangoni, Sérgio; Rodrigues-Simioni, Léa; da Cruz-Höfling, Maria Alice; Rocha, Thalita

2016-01-01

Neuromuscular preparations exposed to B. marajoensis venom show increases in the frequency of miniature end-plate potentials and twitch tension facilitation followed by presynaptic neuromuscular paralysis, without evidences of muscle damage. Considering that presynaptic toxins interfere into the machinery involved in neurotransmitter release (synaptophysin, synaptobrevin, and SNAP25 proteins), the main objective of this communication is to analyze, by immunofluorescence and western blotting, the expression of the synaptic proteins, synaptophysin, synaptobrevin, and SNAP25 and by myography, light, and transmission electron microscopy the pathology of motor nerve terminals and skeletal muscle fibres of chick biventer cervicis preparations (CBC) exposed in vitro to BmjeTX-I and BmjeTX-II toxins from B. marajoensis venom. CBC incubated with toxins showed irreversible twitch tension blockade and unaffected KCl- and ACh-evoked contractures, and the positive colabelling of acetylcholine receptors confirmed that their action was primarily at the motor nerve terminal. Hypercontraction and loose myofilaments and synaptic vesicle depletion and motor nerve damage indicated that the toxins displayed both myotoxic and neurotoxic effect. The blockade resulted from interference on synaptophysin, synaptobrevin, and SNAP25 proteins leading to the conclusion that BmjeTX-I and BmjeTX-II affected neurotransmitter release machinery by preventing the docking of synaptic vesicles to the axolemma of the nerve terminal.

AutoDockFR: Advances in Protein-Ligand Docking with Explicitly Specified Binding Site Flexibility

PubMed Central

Ravindranath, Pradeep Anand; Forli, Stefano; Goodsell, David S.; Olson, Arthur J.; Sanner, Michel F.

2015-01-01

Automated docking of drug-like molecules into receptors is an essential tool in structure-based drug design. While modeling receptor flexibility is important for correctly predicting ligand binding, it still remains challenging. This work focuses on an approach in which receptor flexibility is modeled by explicitly specifying a set of receptor side-chains a-priori. The challenges of this approach include the: 1) exponential growth of the search space, demanding more efficient search methods; and 2) increased number of false positives, calling for scoring functions tailored for flexible receptor docking. We present AutoDockFR–AutoDock for Flexible Receptors (ADFR), a new docking engine based on the AutoDock4 scoring function, which addresses the aforementioned challenges with a new Genetic Algorithm (GA) and customized scoring function. We validate ADFR using the Astex Diverse Set, demonstrating an increase in efficiency and reliability of its GA over the one implemented in AutoDock4. We demonstrate greatly increased success rates when cross-docking ligands into apo receptors that require side-chain conformational changes for ligand binding. These cross-docking experiments are based on two datasets: 1) SEQ17 –a receptor diversity set containing 17 pairs of apo-holo structures; and 2) CDK2 –a ligand diversity set composed of one CDK2 apo structure and 52 known bound inhibitors. We show that, when cross-docking ligands into the apo conformation of the receptors with up to 14 flexible side-chains, ADFR reports more correctly cross-docked ligands than AutoDock Vina on both datasets with solutions found for 70.6% vs. 35.3% systems on SEQ17, and 76.9% vs. 61.5% on CDK2. ADFR also outperforms AutoDock Vina in number of top ranking solutions on both datasets. Furthermore, we show that correctly docked CDK2 complexes re-create on average 79.8% of all pairwise atomic interactions between the ligand and moving receptor atoms in the holo complexes. Finally, we show that down-weighting the receptor internal energy improves the ranking of correctly docked poses and that runtime for AutoDockFR scales linearly when side-chain flexibility is added. PMID:26629955

Microgravity experiments of nano-satellite docking mechanism for final rendezvous approach and docking phase

NASA Astrophysics Data System (ADS)

Ui, Kyoichi; Matunaga, Saburo; Satori, Shin; Ishikawa, Tomohiro

2005-09-01

Laboratory for Space Systems (LSS), Tokyo Institute of Technology (Tokyo Tech) conducted three-dimensional microgravity environment experiments about a docking mechanism for mothership-daughtership (MS-DS) nano-satellite using the facility of Japan Micro Gravity Center (JAMIC) with Hokkaido Institute of Technology (HIT). LSS has studied and developed a docking mechanism for MS-DS nano-satellite system in final rendezvous approach and docking phase since 2000. Consideration of the docking mechanism is to mate a nano-satellite stably while remaining control error of relative velocity and attitude because it is difficult for nano-satellite to have complicated attitude control and mating systems. Objective of the experiments is to verify fundamental grasping function based on our proposed docking methodology. The proposed docking sequence is divided between approach/grasping phase and guiding phase. In the approach/grasping phase, the docking mechanism grasps the nano-satellite even though the nano-satellite has relative position and attitude control errors as well as relative velocity in a docking space. In the guiding function, the docking mechanism guides the nano-satellite to a docking port while adjusting its attitude in order to transfer electrical power and fuel to the nano-satellite. In the paper, we describe the experimental system including the docking mechanism, control system, the daughtership system and the release mechanism, and describe results of microgravity experiments in JAMIC.

STS-84 Commander Charlie Precourt at TCDT Press Meeting

NASA Technical Reports Server (NTRS)

1997-01-01

STS-84 Commander Charles J. Precourt talks to news media representatives and other onlookers during Terminal Countdown Demonstration Test (TCDT) activities at Launch Pad 39A. Two-time space flyer Precourt will lead the other six STS-84 crew members on the sixth docking of the Space Shuttle with the Russian Space Station Mir. One of the crew members, C. Michael Foale, will transfer to the space station and become a member of the Mir 23 crew, replacing U.S. astronaut Jerry M. Linenger, who will return to Earth aboard Atlantis. Foale will live and work on Mir until mid-September when his replacement is expected to arrive on the STS-86 mission. STS-84 is targeted for a May 15 liftoff.

STS-89 M.S. Sharipov of the RSA participates in TCDT

NASA Technical Reports Server (NTRS)

1998-01-01

STS-89 Mission Specialist Salizhan Sharipov of the Russian Space Agency participates in a question and answer session for the media during Terminal Countdown Demonstration Test (TCDT) activities at KSC. The seven astronauts assigned to the eighth Shuttle-Mir docking flight are at KSC for this dress rehearsal for launch, which includes emergency egress training at the launch pad and culminates with a simulated countdown. The Space Shuttle Endeavour is undergoing preparations for liftoff, scheduled for Jan. 22. STS-89 Mission Specialist Andrew Thomas, Ph.D, will transfer to the Russian Space Station Mir, and succeed David Wolf, M.D., who will return to Earth aboard Endeavour. Dr. Thomas will live and work on Mir until June.

78 FR 14355 - National Register of Historic Places; Notification of Pending Nominations and Related Actions

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-05

..., 13000093 LOUISIANA St. Bernard Parish Pecan Grove Plantation House, (Louisiana's French Creole Architecture MPS) 10 Pecan Grove Ln., Meraux, 13000094 MASSACHUSETTS Barnstable County Old North Cemetery, US 6...

4. View of castiron sugar kettle with mill ruins in ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

4. View of cast-iron sugar kettle with mill ruins in background, looking S. - Laurel Valley Sugar Plantation, Sugar Mill, 2 miles South of Thibodaux on State Route 308, Thibodaux, Lafourche Parish, LA

33. View of footbridge near visitor's center, looking from the ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

33. View of footbridge near visitor's center, looking from the northeast (duplicate of HALS no. LA-1-4 (CT)) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

50. View of Caroline Dormon's log house looking from the ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

50. View of Caroline Dormon's log house looking from the southwest (view similar to HALS no. LA-1-21) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

54. View of footbridge from Wings Rest Pond looking from ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

54. View of footbridge from Wings Rest Pond looking from the east (similar to HALS no. LA-1-24) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

51. View of Caroline Dormon's log house looking from the ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

51. View of Caroline Dormon's log house looking from the southeast (similar to HALS no. LA-1-18) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

65. View of rare torreya looking from the southwest (closer ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

65. View of rare torreya looking from the southwest (closer view of springtime image, HALS no. LA-1-37) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

1. Full SW side of dock as viewed from shore ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Full SW side of dock as viewed from shore at the Oil/Creosote Unloading Dock. This view formed a panorama with photo WA-131-H-5, which shows the Oil/Creosote Unloading Dock. - Pacific Creosoting Plant, West Dock, 5350 Creosote Place, Northeast, Bremerton, Kitsap County, WA

Optical Docking Aid Containing Fresnel Lenses

NASA Technical Reports Server (NTRS)

Pierce, Cole J.

1995-01-01

Proposed device provides self-contained visual cues to aid in docking. Similar to devices used to guide pilots in landing on aircraft carriers. Positions and directions of beams of light give observer visual cues of position relative to docking target point. Optical assemblies generate directed, diverging beams of light that, together, mark approach path to docking point. Conceived for use in docking spacecraft at Space Station Freedom, device adapted to numerous industrial docking and alignment applications.

pyDockWEB: a web server for rigid-body protein-protein docking using electrostatics and desolvation scoring.

PubMed

Jiménez-García, Brian; Pons, Carles; Fernández-Recio, Juan

2013-07-01

pyDockWEB is a web server for the rigid-body docking prediction of protein-protein complex structures using a new version of the pyDock scoring algorithm. We use here a new custom parallel FTDock implementation, with adjusted grid size for optimal FFT calculations, and a new version of pyDock, which dramatically speeds up calculations while keeping the same predictive accuracy. Given the 3D coordinates of two interacting proteins, pyDockWEB returns the best docking orientations as scored mainly by electrostatics and desolvation energy. The server does not require registration by the user and is freely accessible for academics at http://life.bsc.es/servlet/pydock. Supplementary data are available at Bioinformatics online.

Multi-Conformer Ensemble Docking to Difficult Protein Targets

DOE PAGES

Ellingson, Sally R.; Miao, Yinglong; Baudry, Jerome; ...

2014-09-08

We investigate large-scale ensemble docking using five proteins from the Directory of Useful Decoys (DUD, dud.docking.org) for which docking to crystal structures has proven difficult. Molecular dynamics trajectories are produced for each protein and an ensemble of representative conformational structures extracted from the trajectories. Docking calculations are performed on these selected simulation structures and ensemble-based enrichment factors compared with those obtained using docking in crystal structures of the same protein targets or random selection of compounds. We also found simulation-derived snapshots with improved enrichment factors that increased the chemical diversity of docking hits for four of the five selected proteins.more » A combination of all the docking results obtained from molecular dynamics simulation followed by selection of top-ranking compounds appears to be an effective strategy for increasing the number and diversity of hits when using docking to screen large libraries of chemicals against difficult protein targets.« less

DockingApp: a user friendly interface for facilitated docking simulations with AutoDock Vina.

PubMed

Di Muzio, Elena; Toti, Daniele; Polticelli, Fabio

2017-02-01

Molecular docking is a powerful technique that helps uncover the structural and energetic bases of the interaction between macromolecules and substrates, endogenous and exogenous ligands, and inhibitors. Moreover, this technique plays a pivotal role in accelerating the screening of large libraries of compounds for drug development purposes. The need to promote community-driven drug development efforts, especially as far as neglected diseases are concerned, calls for user-friendly tools to allow non-expert users to exploit the full potential of molecular docking. Along this path, here is described the implementation of DockingApp, a freely available, extremely user-friendly, platform-independent application for performing docking simulations and virtual screening tasks using AutoDock Vina. DockingApp sports an intuitive graphical user interface which greatly facilitates both the input phase and the analysis of the results, which can be visualized in graphical form using the embedded JMol applet. The application comes with the DrugBank set of more than 1400 ready-to-dock, FDA-approved drugs, to facilitate virtual screening and drug repurposing initiatives. Furthermore, other databases of compounds such as ZINC, available also in AutoDock format, can be readily and easily plugged in.

DockingApp: a user friendly interface for facilitated docking simulations with AutoDock Vina

NASA Astrophysics Data System (ADS)

Di Muzio, Elena; Toti, Daniele; Polticelli, Fabio

2017-02-01

Molecular docking is a powerful technique that helps uncover the structural and energetic bases of the interaction between macromolecules and substrates, endogenous and exogenous ligands, and inhibitors. Moreover, this technique plays a pivotal role in accelerating the screening of large libraries of compounds for drug development purposes. The need to promote community-driven drug development efforts, especially as far as neglected diseases are concerned, calls for user-friendly tools to allow non-expert users to exploit the full potential of molecular docking. Along this path, here is described the implementation of DockingApp, a freely available, extremely user-friendly, platform-independent application for performing docking simulations and virtual screening tasks using AutoDock Vina. DockingApp sports an intuitive graphical user interface which greatly facilitates both the input phase and the analysis of the results, which can be visualized in graphical form using the embedded JMol applet. The application comes with the DrugBank set of more than 1400 ready-to-dock, FDA-approved drugs, to facilitate virtual screening and drug repurposing initiatives. Furthermore, other databases of compounds such as ZINC, available also in AutoDock format, can be readily and easily plugged in.

Multilevel Parallelization of AutoDock 4.2.

PubMed

Norgan, Andrew P; Coffman, Paul K; Kocher, Jean-Pierre A; Katzmann, David J; Sosa, Carlos P

2011-04-28

Virtual (computational) screening is an increasingly important tool for drug discovery. AutoDock is a popular open-source application for performing molecular docking, the prediction of ligand-receptor interactions. AutoDock is a serial application, though several previous efforts have parallelized various aspects of the program. In this paper, we report on a multi-level parallelization of AutoDock 4.2 (mpAD4). Using MPI and OpenMP, AutoDock 4.2 was parallelized for use on MPI-enabled systems and to multithread the execution of individual docking jobs. In addition, code was implemented to reduce input/output (I/O) traffic by reusing grid maps at each node from docking to docking. Performance of mpAD4 was examined on two multiprocessor computers. Using MPI with OpenMP multithreading, mpAD4 scales with near linearity on the multiprocessor systems tested. In situations where I/O is limiting, reuse of grid maps reduces both system I/O and overall screening time. Multithreading of AutoDock's Lamarkian Genetic Algorithm with OpenMP increases the speed of execution of individual docking jobs, and when combined with MPI parallelization can significantly reduce the execution time of virtual screens. This work is significant in that mpAD4 speeds the execution of certain molecular docking workloads and allows the user to optimize the degree of system-level (MPI) and node-level (OpenMP) parallelization to best fit both workloads and computational resources.

Silencing of dedicator of cytokinesis (DOCK180) obliterates pregnancy by interfering with decidualization due to blockage of nuclear entry of autoimmune regulator (AIRE).

PubMed

Mohan, Jasna Jagan; Narayan, Prashanth; Padmanabhan, Renjini Ambika; Joseph, Selin; Kumar, Pradeep G; Laloraya, Malini

2018-07-01

Dedicator of cytokinesis (DOCK 180) involved in cytoskeletal reorganization is primarily a cytosolic molecule. It is recently shown to be nuclear in HeLa cells but its nuclear function is not known. The spatiotemporal distribution of DOCK180 in uterus was studied in uterine cytoplasmic and nuclear compartments during the "window of implantation." The functional significance of nuclear DOCK180 was explored by homology modeling, co-immunoprecipitation assays, and mass spectrometric analysis. Dock180's role in early pregnancy was ascertained by Dock 180 silencing and subsequent quantitative real-time PCR and Western blotting analysis. Our study shows a nuclear DOCK180 in the uterus during "window of implantation." Estrogen and progesterone mediate expression and nuclear translocation of DOCK180. The nuclear function of DOCK180 is attributed to its ability to import autoimmune regulator (AIRE) into the nucleus. Silencing of Dock180 inhibited AIRE nuclear shuttling which influenced its downstream targets, thereby affecting decidualization with AIRE and HOXA-10 as the major players as well as lack of implantation site formation due to impact on angiogenesis-associated genes. DOCK180 has an indispensable role in pregnancy establishment as knocking down Dock180 abrogates pregnancy by a consolidated impact on decidualization and angiogenesis by regulating AIRE nuclear entry. © 2018 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

InterEvDock: a docking server to predict the structure of protein–protein interactions using evolutionary information

PubMed Central

Yu, Jinchao; Vavrusa, Marek; Andreani, Jessica; Rey, Julien; Tufféry, Pierre; Guerois, Raphaël

2016-01-01

The structural modeling of protein–protein interactions is key in understanding how cell machineries cross-talk with each other. Molecular docking simulations provide efficient means to explore how two unbound protein structures interact. InterEvDock is a server for protein docking based on a free rigid-body docking strategy. A systematic rigid-body docking search is performed using the FRODOCK program and the resulting models are re-scored with InterEvScore and SOAP-PP statistical potentials. The InterEvScore potential was specifically designed to integrate co-evolutionary information in the docking process. InterEvDock server is thus particularly well suited in case homologous sequences are available for both binding partners. The server returns 10 structures of the most likely consensus models together with 10 predicted residues most likely involved in the interface. In 91% of all complexes tested in the benchmark, at least one residue out of the 10 predicted is involved in the interface, providing useful guidelines for mutagenesis. InterEvDock is able to identify a correct model among the top10 models for 49% of the rigid-body cases with evolutionary information, making it a unique and efficient tool to explore structural interactomes under an evolutionary perspective. The InterEvDock web interface is available at http://bioserv.rpbs.univ-paris-diderot.fr/services/InterEvDock/. PMID:27131368

Socioeconomic differences in child mortality in central Poland at the end of the nineteenth century.

PubMed

Drozd-Lipińska, Alicja; Klugier, Ewa; Kamińska-Czakłosz, Małgorzata

2015-07-01

Analyses of historical or modern populations indicate a strong relationship between mortality level and standard of living, measured, among other factors, by degree of urbanization. The aim of this study was to assess mortality rates in children of up to 5 years of age in two populations living under different conditions in central modern Poland at the end of the 19th century: the rural parish of Kowal, under Russian partition, and Toruń, an industrial and urbanized centre under Prussian partition. Data on births and deaths were taken from birth certificate registries and from the Prussian statistics yearbooks for 1876-1894. Death rates of children aged 0-5 years were calculated, and also for annual age ranges. The urban population had lower birth rates (37.19‰), natural increase rates (8.0‰), population dynamics rates (1.26‰), which provide information about the relation between two components of a natural increase, i.e. births and deaths, and an over-mortality of boys in relation to girls. In the rural population these values were all higher: 53.67‰, 18.11‰ and 1.59‰ respectively. No impact was found of social stratification on child mortality in the wide age group of 0-5 years. However, for subsequent one-year age groups significant relationships between mortality level and size and industrialization level of the population centres were noted. The living conditions of infants in Toruń, although being in a better position as an area annexed by Prussia, were markedly worse than those of rural Kowal Parish. In the urban centre infant mortality was slightly over 269 for 1000 live born, and in Kowal Parish it was 163 for 1000 live born. The high infant mortality was balanced in Toruń by the higher mortality levels of children aged 2-5 years compared with Kowal Parish. Natural selection in the city had the greatest impact on infants, who did not have the protective influence of breast-feeding because women had to return to work shortly after giving birth. The lower infant mortality of mothers in the countryside due to longer breast-feeding led to larger family sizes. In 1871-1890 in the villages the number of children per women was about 7.42, whereas in Toruń it ranged from 4.4 to 5.2. The probability of death among children who survived the first year of life was higher in the countryside than the town. In the rural parish, perhaps because of cultural factors such as breast-feeding or working practices making full-time baby-sitting possible, children who did not reach the age of 1 year were not subjected to such intensive natural selection. Overall, differences in child mortality in the two centres in 19th central Poland resulted from ecological and cultural conditions, rather than from social and economical reasons (living under different partitions).

Dry dock no. 4. Service Building between dry docks 4 ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Dry dock no. 4. Service Building between dry docks 4 and 5. Floor plans (Navy Yard Public Works Office 1941). In files of Cushman & Wakefield, building 501. Philadelphia Naval Business Center. - Naval Base Philadelphia-Philadelphia Naval Shipyard, Service Building, Dry Docks No. 4 & 5, League Island, Philadelphia, Philadelphia County, PA

Docking system for spacecraft

NASA Technical Reports Server (NTRS)

Kahn, Jon B. (Inventor)

1988-01-01

A mechanism is disclosed for the docking of a spacecraft to a space station where a connection for transfer of personnel and equipment is desired. The invention comprises an active docking structure on a spacecraft and a passive docking structure on the station. The passive structure includes a docking ring mounted on a tunnel structure fixed to the space station. The active structure includes a docking ring carried by an actuator-attenuator devices, each attached at one end to the ring and at its other end in the spacecraft payload bay. The devices respond to command signals for moving the docking ring between a stowed position in the spacecraft to a deployed position suitable for engagement with the docking ring. The devices comprise means responsive to signals of sensed loadings to absorb impact energy and retraction means for drawing the coupled spacecraft and station into final docked configuration and moving the tunnel structure to a berthed position in the spacecraft. Latches couple the spacecraft and space station upon contact of the docking rings and latches establish a structural tie between the spacecraft when retracted.

A Comparison of Candidate Seal Designs for Future Docking Systems

NASA Technical Reports Server (NTRS)

Dunlap, Patrick, H., Jr.; Steinetz, Bruce, M.

2012-01-01

NASA is developing a new docking system to support future space exploration missions to low Earth orbit, the Moon, and other destinations. A key component of this system is the seal at the main docking interface which inhibits the loss of cabin air once docking is complete. Depending on the mission, the seal must be able to dock in either a seal-on-flange or seal-on-seal configuration. Seal-on-flange mating would occur when a docking system equipped with a seal docks to a system with a flat metal flange. This would occur when a vehicle docks to a node on the International Space Station. Seal-on-seal mating would occur when two docking systems equipped with seals dock to each other. Two types of seal designs were identified for this application: Gask-O-seals and multi-piece seals. Both types of seals had a pair of seal bulbs to satisfy the redundancy requirement. A series of performance assessments and comparisons were made between the candidate seal designs indicating that they meet the requirements for leak rate and compression and adhesion loads under a range of operating conditions. Other design factors such as part count, integration into the docking system tunnel, seal-on-seal mating, and cost were also considered leading to the selection of the multi-piece seal design for the new docking system. The results of this study can be used by designers of future docking systems and other habitable volumes to select the seal design best-suited for their particular application.

76 FR 6508 - Data Collection Available for Public Comments and Recommendations

Federal Register 2010, 2011, 2012, 2013, 2014

2011-02-04

... parishes/ counties that were Presidential declared disaster area as a results of Hurricanes Katrina or Rita...: Applicants requesting an SBA loan for Katrina or Rita. Form Number's: 2276 A, B, C, 2281, 2282. Annual...

75 FR 22787 - Proposed Settlement Agreement, Clean Air Act Citizen Suit

Federal Register 2010, 2011, 2012, 2013, 2014

2010-04-30

... for the Woodside Landfill in Walker, Livingston Parish Louisiana (the ``Woodside Petition'') within... to object to issuance of air permit No. 1740-00025V1 to Waste Management for the Woodside Landfill in...

3. Photocopy of c. 1906 photograph looking E at water ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

3. Photocopy of c. 1906 photograph looking E at water tower showing corn grinding shed to the left and mule barn to the rear. - Laurel Valley Sugar Plantation, State Route 308, Thibodaux, Lafourche Parish, LA

ROSTRUM IN MEMORIAL SECTION ALONG CENTRAL DRIVE, WITH BIVOUAC OF ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

ROSTRUM IN MEMORIAL SECTION ALONG CENTRAL DRIVE, WITH BIVOUAC OF THE DEAD MONUMENT AT FAR LEFT. VIEW TO EAST. - Baton Rouge National Cemetery, 220 North 19th Street, Baton Rouge, East Baton Rouge Parish, LA

ALTERNATIVE DISINFECTANTS FOR DRINKING WATER TREATMENT

EPA Science Inventory

During a one-year study at Jefferson Parish, Louisiana the chemical, microbiological, and mutagenic effects of using the major drinking water disinfectants (chlorine, chlorine dioxide, chloramine, ozone) were evaluated. ests were performed on samples collected from various treatm...

ALTERNATIVE DISINFECTION FOR DRINKING WATER TREATMENT

EPA Science Inventory

During a one-yr study at Jefferson Parish, La., the chemical, microbiological, and mutagenic effects os using the major drinkgin water disinfectants (chlorine, chlorine dioxide, chloramine, ozone) were evaluated. Tests were performed on samples collected from various treatment s...

DEPLOYABLE HOMES FOLLOWING NATURAL DISASTERS

EPA Science Inventory

Duke University is partnering with Habitat for Humanity and the Planning and Housing Departments of St. Bernard Parish, Louisiana to assist residents of the gulf coast area by attempting to identify relevant technologies that show promise for improving ...

54. CLEARANCE OF SITE PRIOR TO CONSTRUCTION OF BREAKER BUILDING, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

54. CLEARANCE OF SITE PRIOR TO CONSTRUCTION OF BREAKER BUILDING, AND CONSTRUCTION OF EMBANKMENT FOR RAILROAD SPUR. c.1898 (AKZO No. A-3) - Avery Island Salt Works, Akzo Salt Incorporated, Avery Island, Iberia Parish, LA

45. Starboard elevation under way. Note large turtle deck and ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

45. Starboard elevation under way. Note large turtle deck and crane configuration. - U.S. Coast Guard Cutter WHITE SUMAC, U.S. Coast Guard 8th District Base, 4640 Urquhart Street, New Orleans, Orleans Parish, LA

78 FR 18481 - Drawbridge Operation Regulations; Inner Harbor Navigation Canal, LA

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-27

... regulation governing the operation of the US 90 (Danzinger) vertical lift span drawbridge across the Inner... Lift Span Bridge across the Inner Harbor Navigation Canal, mile 3.10 at New Orleans, Orleans Parish...

14. Photocopy of c. 1906 photograph of 70 foot boom ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

14. Photocopy of c. 1906 photograph of 70 foot boom crane that unloaded the sugar cane. - Laurel Valley Sugar Plantation, Sugar Mill, 2 miles South of Thibodaux on State Route 308, Thibodaux, Lafourche Parish, LA

OVERALL VIEW OF CEMETERY SECTIONS SOUTH OF CENTRAL DRIVE, SHOWING ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

OVERALL VIEW OF CEMETERY SECTIONS SOUTH OF CENTRAL DRIVE, SHOWING SECTION MARKER AT BASE OF TREE. VIEW TO SOUTH. - Baton Rouge National Cemetery, 220 North 19th Street, Baton Rouge, East Baton Rouge Parish, LA

53. View of Wings Rest Pond with reflection of "grandpappy" ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

53. View of Wings Rest Pond with reflection of "grandpappy" looking from the southwest (similar to HALS no. LA-1-23) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

27. View in the Shagbark Hickory area looking north to ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

27. View in the Shagbark Hickory area looking north to the visitor's center (duplicate of HALS no. LA-1-2 (CT)) - Briarwood: The Caroline Dormon Nature Preserve, 216 Caroline Dormon Road, Saline, Bienville Parish, LA

98. (Credit BLV) Detail of gravity, flow conduit intake at ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

98. (Credit BLV) Detail of gravity, flow conduit intake at cross Lake dam Cribbing supports extra suction intake installed in 1930. - McNeil Street Pumping Station, McNeil Street & Cross Bayou, Shreveport, Caddo Parish, LA

10. Detail view of northeast corner looking from the north ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

10. Detail view of northeast corner looking from the north - Piece Sur Piece Building (House), On dirt road off of Highway 494, about 1 1/2 miles Northwest of Bermuda, Bermuda, Natchitoches Parish, LA

1. Historic American Buildings Survey San Francisco Chronicle Library ca. ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. Historic American Buildings Survey San Francisco Chronicle Library ca. 1865 ORIGINAL SITE - RIGHT FOREGROUND (On Market Street) - Holy Cross Parish Hall, Eddy Street (moved from Market & Second Streets), San Francisco, San Francisco County, CA

Public health assessment for petro-processors of Lousiana Incorporated, Baton Rouge, East Baton Rouge Parish, Louisiana, Region 6. Cerclis No. LAD057482713. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-01-16

The Petro-Processors of Louisiana, Inc. (PPI) site, located in East Baton Rouge Parish, Louisiana, operated two waste disposal facilities: the Brooklawn area and the Scenic Highway area. Both areas contain chlorinated aromatic hydrocarbons and chlorinated hydrocarbons. Contaminants have been detected in samples from soil, groundwater, surface water, and air at the Brooklawn area and in soil, groundwater, and air at the Scenic Highway area. The site is considered a public health hazard because of risks to human health from past, present, and future exposure to hazardous substances. Exposure pathways of public health concern are: ingestion of contaminated fish, potential ingestionmore » of contaminated groundwater and wildlife, dermal contact with contaminated sediments, inhalation of airborne volatile contaminants prior to and during remedial activities, and dermal contact and incidental ingestion of contaminated soils.« less

FINAL TECHNICAL REPORT, U.S. Department of Energy: Award No. DE-EE0002855 "Demonstrating the Commercial Feasibility of Geopressured-Geothermal Power Development at Sweet Lake Field - Cameron Parish, Louisiana"

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gayle, Phillip A., Jr.

The goal of the project was to demonstrate the commercial feasibility of geopressured-geothermal power development by exploiting the extraordinarily high pressured hot brines know to exist at depth near the Sweet Lake oil and gas field in Cameron Parish, Louisiana. The existence of a geopressured-geothermal system at Sweet Lake was confirmed in the 1970's and 1980's as part of DOE's Geopressured-Geothermal Program. That program showed that the energy prices at the time could not support commercial production of the resource. Increased electricity prices and technological advancements over the last two decades, combined with the current national support for developing clean,more » renewable energy and the job creation it would entail, provided the justification necessary to reevaluate the commercial feasibility of power generation from this vast resource.« less

Environmental Assessment for decommissioning the Strategic Petroleum Reserve Weeks Island Facility, Iberia Parish, Louisiana

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-12-01

The Strategic Petroleum Reserve (SPR) Weeks Island site is one of five underground salt dome crude oils storage facilities operated by the Department of Energy (DOE). It is located in Iberia Parish, Louisiana. The purpose of the proposed action is to decommission the Weeks Island crude oil storage after the oil inventory has been transferred to other SPR facilities. Water intrusion into the salt dome storage chambers and the development of two sinkholes located near the aboveground facilities has created uncertain geophysical conditions. This Environmental Assessment describes the proposed decommissioning operation, its alternatives, and potential environmental impacts. Based on thismore » analyses, DOE has determined that the proposed action is not a major Federal action significantly affecting the quality of the human environment within the meaning of the National Environmental Policy Act (NEPA) and has issued the Finding of No Significant Impact (FONSI).« less

Climatological variables and the incidence of Dengue fever in Barbados.

PubMed

Depradine, Colin; Lovell, Ernest

2004-12-01

A retrospective study to determine relationships between the incidence of dengue cases and climatological variables and to obtain a predictive equation was carried out for the relatively small Caribbean island of Barbados which is divided into 11 parishes. The study used the weekly dengue cases and precipitation data for the years (1995 - 2000) that occurred in the small area of a single parish. Other climatological data were obtained from the local meteorological offices. The study used primarily cross correlation analysis and found the strongest correlation with the vapour pressure at a lag of 6 weeks. A weaker correlation occurred at a lag of 7 weeks for the precipitation. The minimum temperature had its strongest correlation at a lag of 12 weeks and the maximum temperature a lag of 16 weeks. There was a negative correlation with the wind speed at a lag of 3 weeks. The predictive models showed a maximum explained variance of 35%.

Quality of Water from Shallow Wells in Urban Residential and Light Commercial Areas in Lafayette Parish, Louisiana, 2001 through 2002

USGS Publications Warehouse

Fendick, Robert B.; Tollett, Roland W.

2004-01-01

In 2001-02, the U.S. Geological Survey installed and sampled 28 shallow wells in urban residential and light commercial areas in Lafayette Parish, Louisiana, for a land-use study in the Acadian-Pontchartrain Study Unit of the National Water-Quality Assessment (NAWQA) Program. The wells were installed in the Chicot aquifer system, the primary source of water for irrigation and public-water supplies in southwestern Louisiana. The purpose of this report is to describe the quality of water from the 28 shallow wells and to relate that water quality to natural factors and to human activities. Ground-water samples were analyzed for general ground-water properties and about 240 water-quality contituents, including dissolved solids, major inorganic ions, trace elements, nutrients, dissolved organic carbon (DOC), radon, chlorofluorocarbons, selected stable isotopes, pesticides, pesticide degradation products, and volatile organic compounds (VOC's).

"... As we forgive those who trespass against us...": theological reflections on sin and guilt in the hospital environment.

PubMed

Schmidt, Kurt W

2005-08-01

In general parlance the term sin has lost its existential meaning. Originally a Jewish-Christian term within a purely religious context, referring to a wrongdoing with regard to God, sin has slowly become reduced to guilt in the course of the secularization process. Guilt refers to a wrongdoing, especially with regard to fellow human beings. It also refers to errors of judgement with what can be tragic consequences. These errors can occur whenever human beings are called upon to act, including the hospital environment. A Christian hospital has to address the issue of how to deal not only with guilt-ridden misdemeanors, but also with wrongdoing unto God, which overshadows every instance of guilt-ridden human behavior. Here, as in every parish, the Church Service is the place to acknowledge sin, confess sin, and forgive sin, beyond the boundaries of the parish itself.

Geopressured well project Sweet Lake, Cameron Parish, Louisiana. Final report Feb 80-Sep 82

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hoffman, K.S.

1983-01-01

The Sweet Lake geopressured-geothermal test well(Magma Gulf-Technadril/DOE Amoco Fee 1) was drilled in Cameron Parish, Louisiana under a Department of Energy contract. The primary purpose was to demonstrate technological and economic recovery of the geopressured-geothermal resource. The Gas Research Institute funded ancillary work in mud logging, micropaleontology, organic geochemistry, rock mechanics, and core analysis. The well was perforated in the upper Frio Miogypsinoides sand, at a depth of 15,387-15,414 feet. Mud logging and micropaleontology were used to monitor stratigraphic position during the drilling of the well and were particularly important in picking the casing point at the top of themore » Miogypsinoides sand. Several phases of testing have been carried out, including an initial flow test, a reservoir limit test, and long-term (6+ month) testing.« less

A Hadoop-based Molecular Docking System

NASA Astrophysics Data System (ADS)

Dong, Yueli; Guo, Quan; Sun, Bin

2017-10-01

Molecular docking always faces the challenge of managing tens of TB datasets. It is necessary to improve the efficiency of the storage and docking. We proposed the molecular docking platform based on Hadoop for virtual screening, it provides the preprocessing of ligand datasets and the analysis function of the docking results. A molecular cloud database that supports mass data management is constructed. Through this platform, the docking time is reduced, the data storage is efficient, and the management of the ligand datasets is convenient.

GPU.proton.DOCK: Genuine Protein Ultrafast proton equilibria consistent DOCKing.

PubMed

Kantardjiev, Alexander A

2011-07-01

GPU.proton.DOCK (Genuine Protein Ultrafast proton equilibria consistent DOCKing) is a state of the art service for in silico prediction of protein-protein interactions via rigorous and ultrafast docking code. It is unique in providing stringent account of electrostatic interactions self-consistency and proton equilibria mutual effects of docking partners. GPU.proton.DOCK is the first server offering such a crucial supplement to protein docking algorithms--a step toward more reliable and high accuracy docking results. The code (especially the Fast Fourier Transform bottleneck and electrostatic fields computation) is parallelized to run on a GPU supercomputer. The high performance will be of use for large-scale structural bioinformatics and systems biology projects, thus bridging physics of the interactions with analysis of molecular networks. We propose workflows for exploring in silico charge mutagenesis effects. Special emphasis is given to the interface-intuitive and user-friendly. The input is comprised of the atomic coordinate files in PDB format. The advanced user is provided with a special input section for addition of non-polypeptide charges, extra ionogenic groups with intrinsic pK(a) values or fixed ions. The output is comprised of docked complexes in PDB format as well as interactive visualization in a molecular viewer. GPU.proton.DOCK server can be accessed at http://gpudock.orgchm.bas.bg/.

CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site

PubMed Central

Kurcinski, Mateusz; Jamroz, Michal; Blaszczyk, Maciej; Kolinski, Andrzej; Kmiecik, Sebastian

2015-01-01

Protein–peptide interactions play a key role in cell functions. Their structural characterization, though challenging, is important for the discovery of new drugs. The CABS-dock web server provides an interface for modeling protein–peptide interactions using a highly efficient protocol for the flexible docking of peptides to proteins. While other docking algorithms require pre-defined localization of the binding site, CABS-dock does not require such knowledge. Given a protein receptor structure and a peptide sequence (and starting from random conformations and positions of the peptide), CABS-dock performs simulation search for the binding site allowing for full flexibility of the peptide and small fluctuations of the receptor backbone. This protocol was extensively tested over the largest dataset of non-redundant protein–peptide interactions available to date (including bound and unbound docking cases). For over 80% of bound and unbound dataset cases, we obtained models with high or medium accuracy (sufficient for practical applications). Additionally, as optional features, CABS-dock can exclude user-selected binding modes from docking search or to increase the level of flexibility for chosen receptor fragments. CABS-dock is freely available as a web server at http://biocomp.chem.uw.edu.pl/CABSdock. PMID:25943545

Protein-Protein Docking with F2Dock 2.0 and GB-Rerank

PubMed Central

Chowdhury, Rezaul; Rasheed, Muhibur; Keidel, Donald; Moussalem, Maysam; Olson, Arthur; Sanner, Michel; Bajaj, Chandrajit

2013-01-01

Motivation Computational simulation of protein-protein docking can expedite the process of molecular modeling and drug discovery. This paper reports on our new F2 Dock protocol which improves the state of the art in initial stage rigid body exhaustive docking search, scoring and ranking by introducing improvements in the shape-complementarity and electrostatics affinity functions, a new knowledge-based interface propensity term with FFT formulation, a set of novel knowledge-based filters and finally a solvation energy (GBSA) based reranking technique. Our algorithms are based on highly efficient data structures including the dynamic packing grids and octrees which significantly speed up the computations and also provide guaranteed bounds on approximation error. Results The improved affinity functions show superior performance compared to their traditional counterparts in finding correct docking poses at higher ranks. We found that the new filters and the GBSA based reranking individually and in combination significantly improve the accuracy of docking predictions with only minor increase in computation time. We compared F2 Dock 2.0 with ZDock 3.0.2 and found improvements over it, specifically among 176 complexes in ZLab Benchmark 4.0, F2 Dock 2.0 finds a near-native solution as the top prediction for 22 complexes; where ZDock 3.0.2 does so for 13 complexes. F2 Dock 2.0 finds a near-native solution within the top 1000 predictions for 106 complexes as opposed to 104 complexes for ZDock 3.0.2. However, there are 17 and 15 complexes where F2 Dock 2.0 finds a solution but ZDock 3.0.2 does not and vice versa; which indicates that the two docking protocols can also complement each other. Availability The docking protocol has been implemented as a server with a graphical client (TexMol) which allows the user to manage multiple docking jobs, and visualize the docked poses and interfaces. Both the server and client are available for download. Server: http://www.cs.utexas.edu/~bajaj/cvc/software/f2dock.shtml. Client: http://www.cs.utexas.edu/~bajaj/cvc/software/f2dockclient.shtml. PMID:23483883

AnchorDock: Blind and Flexible Anchor-Driven Peptide Docking.

PubMed

Ben-Shimon, Avraham; Niv, Masha Y

2015-05-05

The huge conformational space stemming from the inherent flexibility of peptides is among the main obstacles to successful and efficient computational modeling of protein-peptide interactions. Current peptide docking methods typically overcome this challenge using prior knowledge from the structure of the complex. Here we introduce AnchorDock, a peptide docking approach, which automatically targets the docking search to the most relevant parts of the conformational space. This is done by precomputing the free peptide's structure and by computationally identifying anchoring spots on the protein surface. Next, a free peptide conformation undergoes anchor-driven simulated annealing molecular dynamics simulations around the predicted anchoring spots. In the challenging task of a completely blind docking test, AnchorDock produced exceptionally good results (backbone root-mean-square deviation ≤ 2.2Å, rank ≤15) for 10 of 13 unbound cases tested. The impressive performance of AnchorDock supports a molecular recognition pathway that is driven via pre-existing local structural elements. Copyright © 2015 Elsevier Ltd. All rights reserved.

Protein-protein docking with binding site patch prediction and network-based terms enhanced combinatorial scoring.

PubMed

Gong, Xinqi; Wang, Panwen; Yang, Feng; Chang, Shan; Liu, Bin; He, Hongqiu; Cao, Libin; Xu, Xianjin; Li, Chunhua; Chen, Weizu; Wang, Cunxin

2010-11-15

Protein-protein docking has made much progress in recent years, but challenges still exist. Here we present the application of our docking approach HoDock in CAPRI. In this approach, a binding site prediction is implemented to reduce docking sampling space and filter out unreasonable docked structures, and a network-based enhanced combinatorial scoring function HPNCscore is used to evaluate the decoys. The experimental information was combined with the predicted binding site to pick out the most likely key binding site residues. We applied the HoDock method in the recent rounds of the CAPRI experiments, and got good results as predictors on targets 39, 40, and 41. We also got good results as scorers on targets 35, 37, 40, and 41. This indicates that our docking approach can contribute to the progress of protein-protein docking methods and to the understanding of the mechanism of protein-protein interactions. © 2010 Wiley-Liss, Inc.

Electrostatics in protein–protein docking

PubMed Central

Heifetz, Alexander; Katchalski-Katzir, Ephraim; Eisenstein, Miriam

2002-01-01

A novel geometric-electrostatic docking algorithm is presented, which tests and quantifies the electrostatic complementarity of the molecular surfaces together with the shape complementarity. We represent each molecule to be docked as a grid of complex numbers, storing information regarding the shape of the molecule in the real part and information regarding the electrostatic character of the molecule in the imaginary part. The electrostatic descriptors are derived from the electrostatic potential of the molecule. Thus, the electrostatic character of the molecule is represented as patches of positive, neutral, or negative values. The potential for each molecule is calculated only once and stored as potential spheres adequate for exhaustive rotation/translation scans. The geometric-electrostatic docking algorithm is applied to 17 systems, starting form the structures of the unbound molecules. The results—in terms of the complementarity scores of the nearly correct solutions, their ranking in the lists of sorted solutions, and their statistical uniqueness—are compared with those of geometric docking, showing that the inclusion of electrostatic complementarity in docking is very important, in particular in docking of unbound structures. Based on our results, we formulate several "good electrostatic docking rules": The geometric-electrostatic docking procedure is more successful than geometric docking when the potential patches are large and when the potential extends away from the molecular surface and protrudes into the solvent. In contrast, geometric docking is recommended when the electrostatic potential around the molecules to be docked appears homogenous, that is, with a similar sign all around the molecule. PMID:11847280

Magnetic docking aid for orbiter to ISS docking

NASA Technical Reports Server (NTRS)

Schneider, William C.; Nagy, Kornel; Schliesing, John A.

1996-01-01

The present docking system for the Orbiter uses mechanical capture latches that are actuated by contact forces. The forces are generated when the two approaching masses collide at the docking mechanism. There is always a trade-off between having high enough momentum to effect capture and low enough momentum to avoid structural overload or unacceptable angular displacements. The use of the present docking system includes a contact thrusting maneuver that causes high docking loads to be included into Space Station. A magnetic docking aid has been developed to reduce the load s during docking. The magnetic docking aid is comprised of two extendible booms that are attached adjacent to the docking structure with electromagnets attached on the end of the boom. On the mating vehicle, two steel plates are attached. As the Orbiter approaches Space Station, the booms are extended, and the magnets attach to the actuated (without thrusting), by slowly driving the extendible booms to the stowed position, thus reacting the load into the booms. This results in a docking event that has lower loads induced into Space Station structure. This method also greatly simplifies the Station berthing tasks, since the Shuttle Remote Manipulation System (SRMS) arm need only place the element to be berthed on the magnets (no load required), rather than firing the Reaction Control System (RCS) jets to provide the required force for capture latch actuation. The Magnetic Docking Aid was development testing on a six degree-of-freedom (6 DOF) system at JSC.

A modular docking mechanism for in-orbit assembly and spacecraft servicing

NASA Technical Reports Server (NTRS)

Gampe, F.; Priesett, K.; Bentall, R. H.

1985-01-01

A Docking Mechanism concept is described which is suitable for use with autonomous docking systems. The central feature of using simple cylindrical handles on one side and a type of prism seating on the other is offered as a practical method of achieving a standardized structural interface without freezing continued development of the latches, either technically or commercially. The main emphasis in docking mechanism concepts is in two directions: (1) a very simple docking mechanism, involving mainly the latch mechanism to achieve a structural link; and (2) a sophisticated Docking Mechanism, where the latch mechanism is designed for nonrigid spacecraft and the achievement of very low dynamic interactions between spacecraft during the docking process.

W.A. Parish Post Combustion CO 2 Capture and Sequestration Project Final Public Design Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Armpriester, Anthony

The Petra Nova Project is a commercial scale post-combustion carbon dioxide capture project that is being developed by a joint venture between NRG Energy (NRG) and JX Nippon Oil and Gas Exploration (JX). The project is designed to separate and capture carbon dioxide from an existing coal-fired unit's flue gas slipstream at NRG's W.A. Parish Generation Station located southwest of Houston, Texas. The captured carbon dioxide will be transported by pipeline and injected into the West Ranch oil field to boost oil production. The project, which is partially funded by financial assistance from the U.S. Department of Energy will usemore » Mitsubishi Heavy Industries of America, Inc.'s Kansai Mitsubishi Carbon Dioxide Recovery (KM-CDR(R)) advanced amine-based carbon dioxide absorption technology to treat and capture at least 90% of the carbon dioxide from a 240 megawatt equivalent flue gas slipstream off of Unit 8 at W.A. Parish. The project will capture approximately 5,000 tons of carbon dioxide per day or 1.5 million tons per year that Unit 8 would otherwise emit, representing the largest commercial scale deployment of post-combustion carbon dioxide capture at a coal power plant to date. The joint venture issued full notice to proceed in July 2014 and when complete, the project is expected to be the world's largest post-combustion carbon dioxide capture facility on an existing coal plant. The detailed engineering is sufficiently complete to prepare and issue the Final Public Design Report.« less

The northern population development; colonization and mortality in Swedish Sápmi, 1776-1895.

PubMed

Sköld, Peter; Axelsson, Per

2008-02-01

The aim of the Consequence of Colonization project is to study population development and mortality in Swedish Sápmi. This article, the first to be drawn from our research, compares these changes between Sami and non-Sami, South and North Sami. Study design. Longitudinal individual based data from computerized records ofthe Glillivare, Undersåker and Frostviken parishes, divided into 2 40-year periods: 1776-1815 and 1856-1895. The main source material used for the present study was a set of data files from the Demographic Data Base (DDB) at Umeå University, the largest historical database in Europe. A Sami cohort was created by indicators of ethnicity in the parish registers, and was later extended with automatic linkages to children and parents. Sami mortality rates show great fluctuations during the period 1776-1815, almost always peaking at a higher rate than in the rest of Sweden. The non-Sami group had lower mortality rates compared with both Sweden as a whole and the Sami in the parish. Between 1856 and 1895, the non-Sami experienced a very small reduction in their mortality rates and the Sami experienced overall improvement in their health status. Significant differences in age-specific mortality appear when the South and North Sami are compared, showing that the South Sami had far lower child mortality rates. The Sami population's health status improved during the nineteenth century. This indicates that they had advanced in the epidemiologic transition model. A corresponding change is not found for the non-Sami group.

76 FR 27309 - Union Electric Company, dba AmerenUE; Notice of Application for Amendment of License and...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-05-11

... brief comments up to 6,000 characters, without prior registration, using the eComment system at http... docks, and add 1,330 feet of breakwater. The completed development would have 18 docks (16 boat docks, 1 swim dock, and 1 fishing dock) with 240 boat slips and 156 personal watercraft lifts; boat fueling...

Docking system for spacecraft

NASA Technical Reports Server (NTRS)

Kahn, Jon B. (Inventor)

1990-01-01

A mechanism for the docking of a space vehicle to a space station where a connection for transfer of personnel and equipment is desired. The invention comprises an active docking structure on a space vehicle 10 and a passive docking structure on a station 11. The passive structure includes a docking ring 50 mounted on a tunnel structure 35 fixed to the space station. The active structure including a docking ring 18 carried by actuator-attenuator devices 20, each attached at one end to the ring 18 and at its other end in the vehicle's payload bay 12. The devices 20 respond to command signals for moving the docking ring 18 between a stowed position in the space vehicle to a deployed position suitable for engagement with the docking ring 50. The devices 20 comprise means responsive to signals of sensed loadings to absorb impact energy and retraction means for drawing the coupled space vehicle and station into final docked configuration and moving the tunnel structure to a berthed position in the space vehicle 10. Latches 60 couple the space vehicle and space station upon contact of docking rings 18 and 50 and latches 41-48 establish a structural tie between the spacecraft when retracted.

Multiple grid arrangement improves ligand docking with unknown binding sites: Application to the inverse docking problem.

PubMed

Ban, Tomohiro; Ohue, Masahito; Akiyama, Yutaka

2018-04-01

The identification of comprehensive drug-target interactions is important in drug discovery. Although numerous computational methods have been developed over the years, a gold standard technique has not been established. Computational ligand docking and structure-based drug design allow researchers to predict the binding affinity between a compound and a target protein, and thus, they are often used to virtually screen compound libraries. In addition, docking techniques have also been applied to the virtual screening of target proteins (inverse docking) to predict target proteins of a drug candidate. Nevertheless, a more accurate docking method is currently required. In this study, we proposed a method in which a predicted ligand-binding site is covered by multiple grids, termed multiple grid arrangement. Notably, multiple grid arrangement facilitates the conformational search for a grid-based ligand docking software and can be applied to the state-of-the-art commercial docking software Glide (Schrödinger, LLC). We validated the proposed method by re-docking with the Astex diverse benchmark dataset and blind binding site situations, which improved the correct prediction rate of the top scoring docking pose from 27.1% to 34.1%; however, only a slight improvement in target prediction accuracy was observed with inverse docking scenarios. These findings highlight the limitations and challenges of current scoring functions and the need for more accurate docking methods. The proposed multiple grid arrangement method was implemented in Glide by modifying a cross-docking script for Glide, xglide.py. The script of our method is freely available online at http://www.bi.cs.titech.ac.jp/mga_glide/. Copyright © 2018 The Authors. Published by Elsevier Ltd.. All rights reserved.

Detailed analysis of grid-based molecular docking: A case study of CDOCKER-A CHARMm-based MD docking algorithm.

PubMed

Wu, Guosheng; Robertson, Daniel H; Brooks, Charles L; Vieth, Michal

2003-10-01

The influence of various factors on the accuracy of protein-ligand docking is examined. The factors investigated include the role of a grid representation of protein-ligand interactions, the initial ligand conformation and orientation, the sampling rate of the energy hyper-surface, and the final minimization. A representative docking method is used to study these factors, namely, CDOCKER, a molecular dynamics (MD) simulated-annealing-based algorithm. A major emphasis in these studies is to compare the relative performance and accuracy of various grid-based approximations to explicit all-atom force field calculations. In these docking studies, the protein is kept rigid while the ligands are treated as fully flexible and a final minimization step is used to refine the docked poses. A docking success rate of 74% is observed when an explicit all-atom representation of the protein (full force field) is used, while a lower accuracy of 66-76% is observed for grid-based methods. All docking experiments considered a 41-member protein-ligand validation set. A significant improvement in accuracy (76 vs. 66%) for the grid-based docking is achieved if the explicit all-atom force field is used in a final minimization step to refine the docking poses. Statistical analysis shows that even lower-accuracy grid-based energy representations can be effectively used when followed with full force field minimization. The results of these grid-based protocols are statistically indistinguishable from the detailed atomic dockings and provide up to a sixfold reduction in computation time. For the test case examined here, improving the docking accuracy did not necessarily enhance the ability to estimate binding affinities using the docked structures. Copyright 2003 Wiley Periodicals, Inc.

Magnet-Based System for Docking of Miniature Spacecraft

NASA Technical Reports Server (NTRS)

Howard, Nathan; Nguyen, Hai D.

2007-01-01

A prototype system for docking a miniature spacecraft with a larger spacecraft has been developed by engineers at the Johnson Space Center. Engineers working on Mini AERCam, a free-flying robotic camera, needed to find a way to successfully dock and undock their miniature spacecraft to refuel the propulsion and recharge the batteries. The subsystems developed (see figure) include (1) a docking port, designed for the larger spacecraft, which contains an electromagnet, a ball lock mechanism, and a service probe; and (2) a docking cluster, designed for the smaller spacecraft, which contains either a permanent magnet or an electromagnet. A typical docking operation begins with the docking spacecraft maneuvering into position near the docking port on the parent vehicle. The electromagnet( s) are then turned on, and, if necessary, the docking spacecraft is then maneuvered within the capture envelope of the docking port. The capture envelope for this system is approximated by a 5-in. (12.7-cm) cube centered on the front of the docking-port electromagnet and within an angular misalignment of <30 . Thereafter, the magnetic forces draw the smaller spacecraft toward the larger one and this brings the spacecraft into approximate alignment prior to contact. Mechanical alignment guides provide the final rotational alignment into one of 12 positions. Once the docking vehicle has been captured magnetically in the docking port, the ball-lock mechanism is activated, which locks the two spacecraft together. At this point the electromagnet( s) are turned off, and the service probe extended if recharge and refueling are to be performed. Additionally, during undocking, the polarity of one electromagnet can be reversed to provide a gentle push to separate the two spacecraft. This system is currently being incorporated into the design of Mini AERCam vehicle.