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Sample records for paspalum notatum fluegge

  1. Mass transfer, kinetics and equilibrium studies for the biosorption of methylene blue using Paspalum notatum.

    PubMed

    Kumar, K Vasanth; Porkodi, K

    2007-07-19

    Batch experiments were carried out for the sorption of methylene blue onto Paspalum notatum. The operating variables studied were initial dye concentration, initial solution pH, adsorbent dosage and contact time. Experimental equilibrium data were fitted to Freundlich, Langmuir and Redlich-Peterson isotherms by non-linear regression method. Six error functions was used to determine the optimum isotherm by non-linear regression method. The present study shows r2 as the best error function to determine the parameters involved in both two- and three-parameter isotherms. Langmuir isotherm was found to be the optimum isotherm for methylene blue onto P. notatum. The monolayer methylene blue sorption capacity of P. notatum was found to be 31 mg/g. The kinetics of methylene blue onto P. notatum was found to follow a pseudo second order kinetics. A Boyd plot confirms the external mass transfer as the rate-limiting step in the dye sorption process. The influence of initial dye concentration on the dye sorption process was represented in the form of dimensionless mass transfer numbers (Sh/Sc0.33) and was found to vary as C(0)-5x10(-6).

  2. Vertical migration of Haemonchus contortus infective larvae on Cynodon dactylon and Paspalum notatum pastures in response to climatic conditions.

    PubMed

    Amaradasa, Bimal S; Lane, Robert A; Manage, Ananda

    2010-05-28

    Observations were made on vertical migration patterns of Haemonchus contortus infective larvae on Cynodon dactylon (bermudagrass) and Paspalum notatum (bahiagrass) pastures under summer climatic conditions typical of East Texas. Ten thousand H. contortus infective larvae (L3) were introduced to 100 cm(2) subplots of each pasture species within a plot area of 1m(2). Subplots were inoculated with larvae by applying them in an aqueous medium to the soil or mat beneath the vegetation. Herbage from the inoculated areas was harvested on 5 sampling days over a span of 21 days. L3 recoveries were observed and recorded each day on four herbage strata viz. 0-5, 5-10, 10-20 and >20 cm from ground level. The log transformed larval recovery data were analyzed for effect of day, stratum, and day x stratum interaction for each grass species during two separate experimental periods. Precipitation, relative humidity and temperature during the study were subjected to correlation and multiple regression analyses with the larval counts. Significant (Por=0.93) between rainfall and total average daily larval counts was apparent. The multiple regression analysis did not show significant results for any of the climatic factors tested. This study showed that the H. contortus infective larvae can survive beyond 21 days in the soil and infest pasture grasses when the climatic conditions are favorable. Avoiding use of H. contortus contaminated pasturelands in summer at the onset of rainfall following a dry spell may effectively reduce nematode loads in susceptible farm animals. Additional studies should focus on factors affecting long term L3 survivability, migrational pattern on these and other plant species and the

  3. Apomixis and ploidy barrier suppress pollen-mediated gene flow in field grown transgenic turf and forage grass (Paspalum notatum Flüggé).

    PubMed

    Sandhu, Sukhpreet; Blount, Ann R; Quesenberry, Kenneth H; Altpeter, Fredy

    2010-09-01

    Bahiagrass (Paspalum notatum Flüggé) is the predominant forage grass in the southeastern US. The commercially important bahiagrass cultivar 'Argentine' is preferred for genetic transformation over sexual diploid cytotypes, since it produces uniform seed progeny through apomixis. Pseudogamous apomictic seed production in Argentine bahiagrass may contribute to transgene confinement. It is characterized by embryo development which is independent of fertilization of the egg cell, but requires fertilization with compatible pollen to produce the endosperm. Pollen-mediated gene transfer from transgenic, glufosinate-resistant apomictic bahiagrass as pollen donor at close proximity (0.5-3.5 m) with non-transgenic sexual or apomictic bahiagrass cultivars as pollen receptors was evaluated under field conditions. Hybridization frequency was evaluated by glufosinate herbicide resistance in >23,300 seedlings derived from open-pollinated (OP) pollen receptor plants. Average gene transfer between transgenic apomictic, tetraploid and sexual diploid bahiagrass was 0.03%. Herbicide-resistant hybrids confirmed by immuno-chromatographic detection of the PAT protein displayed a single copy bar gene identical to the pollen parent. Hybrids resulting from diploid pollen receptors were confirmed as triploids or aneu-triploids with significantly reduced vigor and seed set as compared to the parents. Transmission of transgenes to sexual bahiagrass is severely restricted by the ploidy difference between tetraploid apomicts and diploid sexual bahiagrass. Average gene transfer between transgenic apomictic tetraploid and non-transgenic, apomictic tetraploid bahiagrass was 0.17%, confirming a very low frequency of amphimixis in apomictic bahiagrass cultivars. While not providing complete transgene containment, gene transfer between transgenic apomictic and non-transgenic bahiagrass occurs at a much lower frequency than reported for other cross-pollinating or facultative apomictic grasses.

  4. The dominant 55 kDa allergen of the subtropical Bahia grass (Paspalum notatum) pollen is a group 13 pollen allergen, Pas n 13.

    PubMed

    Davies, Janet M; Voskamp, Astrid; Dang, Thanh D; Pettit, Benjamin; Loo, Dorothy; Petersen, Arnd; Hill, Michelle M; Upham, John W; Rolland, Jennifer M; O'Hehir, Robyn E

    2011-03-01

    Bahia grass, Paspalum notatum, is an important pollen allergen source with a long season of pollination and wide distribution in subtropical and temperate regions. We aimed to characterize the 55 kDa allergen of Bahia grass pollen (BaGP) and ascertain its clinical importance. BaGP extract was separated by 2D-PAGE and immunoblotted with serum IgE of a grass pollen-allergic patient. The amino-terminal protein sequence of the predominant allergen isoform at 55 kDa had similarity with the group 13 allergens of Timothy grass and maize pollen, Phl p 13 and Zea m 13. Four sequences obtained by rapid amplification of the allergen cDNA ends represented multiple isoforms of Pas n 13. The predicted full length cDNA for Pas n 13 encoded a 423 amino acid glycoprotein including a signal peptide of 28 residues and with a predicted pI of 7.0. Tandem mass spectrometry of tryptic peptides of 2D gel spots identified peptides specific to the deduced amino acid sequence for each of the four Pas n 13 cDNA, representing 47% of the predicted mature protein sequence of Pas n 13. There was 80.6% and 72.6% amino acid identity with Zea m 13 and Phl p 13, respectively. Reactivity with a Phl p 13-specific monoclonal antibody AF6 supported designation of this allergen as Pas n 13. The allergen was purified from BaGP extract by ammonium sulphate precipitation, hydrophobic interaction and size exclusion chromatography. Purified Pas n 13 reacted with serum IgE of 34 of 71 (48%) grass pollen-allergic patients and specifically inhibited IgE reactivity with the 55 kDa band of BaGP for two grass pollen-allergic donors. Four isoforms of Pas n 13 from pI 6.3-7.8 had IgE-reactivity with grass pollen allergic sera. The allergenic activity of purified Pas n 13 was demonstrated by activation of basophils from whole blood of three grass pollen-allergic donors tested but not control donors. Pas n 13 is thus a clinically relevant pollen allergen of the subtropical Bahia grass likely to be important in eliciting

  5. Final Report: The Rhizosphere Association of the Nitrogen Fixing Bacterial Species Azotobacter Paspali with the Tropical Grass Paspalum Notatum: Specificity of Colonization and Contribution to Plant Nutrition, July 1, 1995 - February 14, 1997

    SciTech Connect

    Kennedy, Christina K.

    1997-02-14

    The nitrogen fixing bacterium azotobacter paspali was first isolated from the roots of the sub-tropical grass, palpium notatum, and added to the clenus in 1996, by Dr. J. Dobereiner (Brazil). It is mentioned that this root association bacteria shows remarkable signs of host-plant specificity to one eco-type of this grass. This specificity is rare in non-symbiotic plant microbe interactions so far identified.

  6. Genetic variation in polyploid forage grass: Assessing the molecular genetic variability in the Paspalum genus

    PubMed Central

    2013-01-01

    Background Paspalum (Poaceae) is an important genus of the tribe Paniceae, which includes several species of economic importance for foraging, turf and ornamental purposes, and has a complex taxonomical classification. Because of the widespread interest in several species of this genus, many accessions have been conserved in germplasm banks and distributed throughout various countries around the world, mainly for the purposes of cultivar development and cytogenetic studies. Correct identification of germplasms and quantification of their variability are necessary for the proper development of conservation and breeding programs. Evaluation of microsatellite markers in different species of Paspalum conserved in a germplasm bank allowed assessment of the genetic differences among them and assisted in their proper botanical classification. Results Seventeen new polymorphic microsatellites were developed for Paspalum atratum Swallen and Paspalum notatum Flüggé, twelve of which were transferred to 35 Paspalum species and used to evaluate their variability. Variable degrees of polymorphism were observed within the species. Based on distance-based methods and a Bayesian clustering approach, the accessions were divided into three main species groups, two of which corresponded to the previously described Plicatula and Notata Paspalum groups. In more accurate analyses of P. notatum accessions, the genetic variation that was evaluated used thirty simple sequence repeat (SSR) loci and revealed seven distinct genetic groups and a correspondence of these groups to the three botanical varieties of the species (P. notatum var. notatum, P. notatum var. saurae and P. notatum var. latiflorum). Conclusions The molecular genetic approach employed in this study was able to distinguish many of the different taxa examined, except for species that belong to the Plicatula group, which has historically been recognized as a highly complex group. Our molecular genetic approach represents a

  7. Comparative mapping reveals partial conservation of synteny at the apomixis locus in Paspalum spp.

    PubMed

    Pupilli, F; Martinez, E J; Busti, A; Calderini, O; Quarin, C L; Arcioni, S

    2004-01-01

    In plants, gametophytic apomixis is a form of asexual reproduction that leads to the formation of seed-derived offspring that are genetically identical to the mother plant. A common set of RFLP markers, including five rice anchor markers previously shown to be linked to apomixis in Paspalum simplex, were used to detect linkage with apomixis in P. notatum and P. malacophyllum. A comparative map of the region around the apomixis locus was constructed for the three Paspalum species, and compared to the rice map. The locus that controls apomixis in P. simplex was almost completely conserved in the closely related species P. malacophyllum, whereas it was only partially represented in the distantly related species P. notatum. Although strong synteny of markers was noted between this locus and a portion of rice chromosome 12 in both P. simplex and P. malacophyllum, the same locus in P. notatum was localized to a hybrid chromosome which carries markers that map to rice chromosomes 2 and 12. All three Paspalum species showed recombination suppression at the apomixis locus; in the case of P. notatum, this might be due to a heterozygosity for a translocation that most probably negatively interferes with chromosomal pairing near the locus. A common set of markers that show linkage with apomixis in all three Paspalum species define a portion of the apomixis-controlling locus that is likely to contain genes critical for apomictic reproduction.

  8. Reminiscence of phospholipase B in Penicillium notatum.

    PubMed

    Saito, Kunihiko

    2014-01-01

    Since the phospholipase B (PLB) was reported as a deacylase of both lecithin and lysolecithin yielding fatty acids and glycerophosphocholine (GPC), there was a question as to whether it is a single enzyme or a mixture of a phospholipase A2 (PLA2) and a lysophospholipase (LPL). We purified the PLB in Penicillium notatum and showed that it catalyzed deacylation of sn-1 and sn-2 fatty acids of 1,2-diacylphospholipids and also sn-1 or sn-2 fatty acids of 1- or 2-monoacylphospholipids (lysophospholipids). Further, it also has a monoacyllipase activity. The purified PLB is a glycoprotein with m.w. of 91,300. The sugar moiety is M9 only and the protein moiety consists of 603 amino acids. PLB, different from PLA2, shows other enzymatic activities, such as transacylase, lipase and acylesterase. PLB activity is influenced by various substances, e.g. detergents, deoxycholate, diethylether, Fe(3+), and endogenous protease. Therefore, PLB might have broader roles than PLA2 in vivo. The database shows an extensive sequence similarity between P. notatum PLB and fungal PLB, cPLA2 and patatin, suggesting a homologous relationship. The catalytic triad of cPLA2, Ser, Asp and Arg, is also present in P. notatum PLB. Other related PLBs, PLB/Lipases are discussed.

  9. Paspalum striate mosaic virus: an Australian mastrevirus from Paspalum dilatatum.

    PubMed

    Geering, Andrew D W; Thomas, John E; Holton, Timothy; Hadfield, James; Varsani, Arvind

    2012-01-01

    Three monocot-infecting mastreviruses from Australia, all found primarily in pasture and naturalised grasses, have been characterised at the molecular level. Here, we present the full genome sequence of a fourth, Paspalum striate mosaic virus (PSMV), isolated from Paspalum dilatatum from south-east Queensland. The genome was 2816 nt long and had an organisation typical of other monocot-infecting mastreviruses. Its nearest relative is Bromus cartharticus striate mosaic virus (BCSMV), with which it shares an overall genome identity of 75%. Phylogenetic analysis of the complete genome and each of the putative viral proteins places PSMV in a group with the other three Australian striate mosaic viruses. PSMV, BCSMV and Digitaria didactyla striate mosaic virus all contain a similar, small recombinant sequence in the small intergenic region.

  10. A molecular map of the apomixis-control locus in Paspalum procurrens and its comparative analysis with other species of Paspalum.

    PubMed

    Hojsgaard, D H; Martínez, E J; Acuña, C A; Quarin, C L; Pupilli, F

    2011-10-01

    Since apomixis was first mapped in Paspalum, the absence of recombination that characterizes the related locus appeared to be the most difficult bottleneck to overcome for the dissection of the genetic determinants that control this trait. An approach to break the block of recombination was developed in this genus through an among-species comparative mapping strategy. A new apomictic species, P. procurrens (Q4094) was crossed with a sexual plant of P. simplex and their progeny was classified for reproductive mode with the aid of morphological, embryological and genetic analyses. On this progeny, a set of heterologous rice RFLP markers strictly co-segregating in coupling phase with apomixis was identified. These markers were all located on the telomeric region of the long arm of the chromosome 12 of rice. In spite of the lack of recombination exhibited by the apomixis-linked markers in P. procurrens, a comparative mapping analysis among P. simplex, P. malacophyllum, P. notatum and P. procurrens, allowed us to identify a small group of markers co-segregating with apomixis in all these species. These markers bracketed a chromosome region that likely contains all the genetic determinants of apomictic reproduction in Paspalum. The implications of this new inter-specific approach for overcoming the block of recombination to isolate the genetic determinants of apomixis and gain a better comprehension of genome structure of apomictic chromosome region are discussed.

  11. A methylation status analysis of the apomixis-specific region in Paspalum spp. suggests an epigenetic control of parthenogenesis.

    PubMed

    Podio, Maricel; Cáceres, Maria E; Samoluk, Sergio S; Seijo, José G; Pessino, Silvina C; Ortiz, Juan Pablo A; Pupilli, Fulvio

    2014-12-01

    Apomixis, a clonal plant reproduction by seeds, is controlled in Paspalum spp. by a single locus which is blocked in terms of recombination. Partial sequence analysis of the apomixis locus revealed structural features of heterochromatin, namely the presence of repetitive elements, gene degeneration, and de-regulation. To test the epigenetic control of apomixis, a study on the distribution of cytosine methylation at the apomixis locus and the effect of artificial DNA demethylation on the mode of reproduction was undertaken in two apomictic Paspalum species. The 5-methylcytosine distribution in the apomixis-controlling genomic region was studied in P. simplex by methylation-sensitive restriction fragment length polymorphism (RFLP) analysis and in P. notatum by fluorescene in situ hybridization (FISH). The effect of DNA demethylation was studied on the mode of reproduction of P. simplex by progeny test analysis of apomictic plants treated with the demethylating agent 5'-azacytidine. A high level of cytosine methylation was detected at the apomixis-controlling genomic region in both species. By analysing a total of 374 open pollination progeny, it was found that artificial demethylation had little or no effect on apospory, whereas it induced a significant depression of parthenogenesis. The results suggested that factors controlling repression of parthenogenesis might be inactivated in apomictic Paspalum by DNA methylation.

  12. Development and characterization of seashore paspalum SSR markers

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The increasing use of secondary water sources for irrigation, which is highly linked to salinization, creates a demand for salt tolerant turf. Seashore paspalum (Paspalum vaginatum Swartz) is a warm-season turfgrass that survives in sand dunes along coastal sites, brackish ponds, and in estuaries. S...

  13. Application of the FluEgg model to predict transport of Asian carp eggs in the Saint Joseph River (Great Lakes tributary)

    USGS Publications Warehouse

    Garcia, Tatiana; Murphy, Elizabeth A.; Jackson, P. Ryan; Garcia, Marcelo H.

    2015-01-01

    The Fluvial Egg Drift Simulator (FluEgg) is a three-dimensional Lagrangian model that simulates the movement and development of Asian carp eggs until hatching based on the physical characteristics of the flow field and the physical and biological characteristics of the eggs. This tool provides information concerning egg development and spawning habitat suitability including: egg plume location, egg vertical and travel time distribution, and egg-hatching risk. A case study of the simulation of Asian carp eggs in the Lower Saint Joseph River, a tributary of Lake Michigan, is presented. The river hydrodynamic input for FluEgg was generated in two ways — using hydroacoustic data and using HEC-RAS model data. The HEC-RAS model hydrodynamic input data were used to simulate 52 scenarios covering a broad range of flows and water temperatures with the eggs at risk of hatching ranging from 0 to 93% depending on river conditions. FluEgg simulations depict the highest percentage of eggs at risk of hatching occurs at the lowest discharge and at peak water temperatures. Analysis of these scenarios illustrates how the interactive relation among river length, hydrodynamics, and water temperature influence egg transport and hatching risk. An improved version of FluEgg, which more realistically simulates dispersion and egg development, is presented. Also presented is a graphical user interface that facilitates the use of FluEgg and provides a set of post-processing analysis tools to support management decision-making regarding the prevention and control of Asian carp reproduction in rivers with or without Asian carp populations.

  14. Evaluation of seashore paspalum germplasm for resistance to dollar spot disease

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Development of seashore paspalum (Paspalum vaginatum Swartz) cultivars that exhibit resistance to dollar spot disease, caused by Sclerotinia homoeocarpa F.T. Bennett, are needed. Seashore paspalum is a warm-season turfgrass often utilized on golf courses and athletic fields in the southeastern Unite...

  15. Host Status of 'SeaIsle 1' Seashore Paspalum (Paspalum vaginatum) to Belonolaimus longicaudatus and Hoplolaimus galeatus

    PubMed Central

    Hixson, A. C.; Crow, W. T.; McSorley, R.; Trenholm, L. E.

    2004-01-01

    Belonolaimus longicaudatus and Hoplolaimus galeatus are considered among the most damaging pathogens of turfgrasses in Florida. However, the host status of seashore paspalum (Paspalum vaginatum) is unknown. Glasshouse experiments were performed in 2002 and 2003 to determine the tolerance of 'SeaIsle 1' seashore paspalum to a population of B. longicaudatus and a population of H. galeatus, and to compare to 'Tifdwarf' bermudagrass for differences. Both nematode species reproduced well on either grass, but only B. longicaudatus consistently reduced root growth as measured by root length. Belonolaimus longicaudatus reduced root growth (P ≤ 0.05) by 35% to 45% at 120 days after inoculation on both grasses. In 2003, higher inoculum levels of H. galeatus reduced root growth (P ≤ 0.05) by 19.4% in seashore paspalum and by 14% in bermudagrass after 60 and 120 days of exposure, respectively. Percentage reductions in root length caused by H. galeatus and B. longicaudatus indicated no differences between grass species, although Tifdwarf bermudagrass supported higher soil population densities of both nematodes than SeaIsle 1 seashore paspalum. PMID:19262830

  16. Field Responses of Bermudagrass and Seashore paspalum Cultivars to Sting and Spiral Nematodes

    PubMed Central

    Pang, Wenjing; Luc, John E.; Crow, William T.; Kenworthy, Kevin E.; Giblin-Davis, Robin M.; McSorley, Robert; Kruse, Jason K.

    2011-01-01

    Belonolaimus longicaudatus and Helicotylenchus spp. are damaging nematode species on bermudagrass (Cynodon spp.) and seashore paspalum (Paspalum vaginatum) in sandy soils of the southeastern United States. Eight bermudagrass and three seashore paspalum cultivars were tested for responses to both nematode species in field plots for two years in Florida. Soil samples were taken every three months and nematode population densities in soil were quantified. Turfgrass aboveground health was evaluated throughout the growing season. Results showed that all bermudagrass cultivars, except TifSport, were good hosts for B. longicaudatus, and all seashore paspalum cultivars were good hosts for H. pseudorobustus. Overall, bermudagrass was a better host for B. longicaudatus while seashore paspalum was a better host for H. pseudorobustus. TifSport bermudagrass and SeaDwarf seashore paspalum cultivars supported the lowest population densities of B. longicaudatus. Seashore paspalum had a higher percent green cover than bermudagrass in the nematode-infested field. Nematode intolerant cultivars were identified. PMID:23430148

  17. Effects of genotype and isolate on expression of dollar spot in seashore paspalum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Seashore paspalum (Paspalum vaginatum Swartz) is a warm-season turfgrass species primarily utilized on golf courses and athletic fields and is often impacted by dollar spot disease. Dollar spot, caused by Sclerotinia homoeocarpa F.T. Bennett, is a major fungal disease and the most common turfgrass p...

  18. Unravelling the ambiguous reproductive biology of Paspalum malacophyllum: a decades old story clarified

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A recent a manuscript was published by our group that analyzed the reproductive biology of the grass species Paspalum malacophyllum using traditional embryological techniques combined with current cytological and molecular methods. Our findings confirmed apparent contradictions regarding the reprod...

  19. Interaction Between Belonolaimus longicaudatus and Helicotylenchus pseudorobustus on Bermudagrass and Seashore Paspalum Hosts

    PubMed Central

    Crow, William T.; Luc, John E.; Sekora, Nicholas S.; Pang, Wenjing

    2013-01-01

    Belonolaimus longicaudatus and Helicotylenchus pseudorobustus are among the most common nematode parasites of turfgrasses in Florida. Bermudagrass (Cynodon dactylon × C. transvaalensis) and seashore paspalum (Paspalum vaginatum) are the two turf species most commonly used on Florida golf courses. This paper explores the interactions between B. longicaudatus and H. pseudorobustus on bermudagrass and seashore paspalum hosts. Data collected from thousands of nematode samples submitted to the Florida Nematode Assay Lab over a 8-yr period revealed a negative relationship between B. longicaudatus and H. pseudorobustus on bermudagrass, but not seashore paspalum. In a multi-year field plot experiment using multiple cultivars of bermudagrass, and seashore paspalum B. longicaudatus and H. pseudorobustus were negatively related on both turf species. Greenhouse trials where multiple cultivars of both turf species were inoculated with different combinations of B. longicaudatus and H. pseudorobustus found that each nematode species was inhibitory to the other on both host species. Belonolaimus longicaudatus and H. pseudorobustus clearly impact each other on turfgrass hosts, although the mechanism of the nematode-nematode interactions is unknown. PMID:23589655

  20. Lower Mississippi River Environmental Program. Report 2. A Physical Description of Main Stem Levee Borrow Pits along the Lower Mississippi River

    DTIC Science & Technology

    1988-02-01

    Paspalum boscianum Bull paspalum Paspalum dilatatum Dallis grass Paspalum distichum Knotgrass Paspalum ...notatum Bahia grass Paspalum urvillei Vasey grass Passiflora incarnata Maypop Phoradendron flavescens Mistletoe Physalis heterophylla Ground cherry...mixed of Johnson grass and Bermuda grass pasture, while the river side exhibits typical marsh vegetation and bottomland hardwood characteristics

  1. Analysis of variation for apomictic reproduction in diploid Paspalum rufum

    PubMed Central

    Delgado, Luciana; Galdeano, Florencia; Sartor, María E.; Quarin, Camilo L.; Espinoza, Francisco; Ortiz, Juan Pablo A.

    2014-01-01

    Background and Aims The diploid cytotype of Paspalum rufum (Poaceae) reproduces sexually and is self-sterile; however, recurrent autopolyploidization through 2n + n fertilization and the ability for reproduction via apomixis have been documented in one genotype of the species. The objectives of this work were to analyse the variation in the functionality of apomixis components in diploid genotypes of P. rufum and to identify individuals with contrasting reproductive behaviours. Methods Samples of five individuals from each of three natural populations of P. rufum (designated R2, R5 and R6) were used. Seeds were obtained after open pollination, selfing, conspecific interploidy crosses and interspecific interploidy self-pollination induction. The reproductive behaviour of each plant was determined by using the flow cytometric seed screen (FCSS) method. Embryo sacs were cleared using a series of ethanol and methyl salicylate solutions and observed microscopically. Key Results In open pollination, all genotypes formed seeds by sexual means and no evidence of apomeiotic reproduction was detected. However, in conspecific interploidy crosses and interspecific interploidy self-pollination induction, variations in the reproductive pathways were observed. While all plants from populations R2 and R6 formed seeds exclusively by sexual means, three genotypes from the R5 population developed seeds from both meiotic and aposporous embryo sacs, and one of them (R5#49) through the complete apomictic pathway (apospory + parthenogenesis + pseudogamy). Cytoembryological observations revealed the presence of both meiotic and aposporous embryo sacs in all the genotypes analysed, suggesting that parthenogenesis could be uncoupled from apospory in some genotypes. Conclusions The results presented demonstrate the existence of variation in the functionality of apomixis components in natural diploid genotypes of P. rufum and have identified individuals with contrasting reproductive

  2. Complete asynapsis resulting in 2n pollen formation in Paspalum jesuiticum Parodi (Poaceae).

    PubMed

    Bernardo Filho, R A; Santos, A C C; Souza, F H D; Valls, J F M; Pagliarini, M S

    2014-01-17

    Cytological investigation revealed complete asynapsis during microsporogenesis in 2 wild accessions of Paspalum jesuiticum collected in distinct Brazilian regions. Both accessions were hexaploid (2n = 6x = 60) and 60 univalents could be counted at diakinesis. In this phase, the majority of meiocytes exhibited univalents with both chromatids. After alignment at the metaphase plate, the chromatids segregated to the poles. Only 1 meiotic division (equational) occurred, and after cytokinesis, a dyad with 2n microspores was formed. The genetic constitution of the 2n gametes was equivalent to that of first division restitution (FDR). Since recombination did not occur, 100% transmission of parental heterozygosity could be expected from the FDR 2n gametes. The meiotic behavior of both accessions suggested that they resulted from a recent natural hybridization event. The potential use of the 2n gametes in Paspalum breeding programs has been discussed.

  3. Harnessing apomictic reproduction in grasses: what we have learned from Paspalum

    PubMed Central

    Ortiz, Juan Pablo A.; Quarin, Camilo L.; Pessino, Silvina C.; Acuña, Carlos; Martínez, Eric J.; Espinoza, Francisco; Hojsgaard, Diego H.; Sartor, Maria E.; Cáceres, Maria E.; Pupilli, Fulvio

    2013-01-01

    Background Apomixis is an alternative route of plant reproduction that produces individuals genetically identical to the mother plant through seeds. Apomixis is desirable in agriculture, because it guarantees the perpetuation of superior genotypes (i.e. heterotic hybrid seeds) by self-seeding without loss of hybrid vigour. The Paspalum genus, an archetypal model system for mining apomixis gene(s), is composed of about 370 species that have extremely diverse reproductive systems, including self-incompatibility, self-fertility, full sexual reproduction, and facultative or obligate apomixis. Barriers to interspecific hybridization are relaxed in this genus, allowing the production of new hybrids from many different parental combinations. Paspalum is also tolerant to various parental genome contributions to the endosperm, allowing analyses of how sexually reproducing crop species might escape from dosage effects in the endosperm. Scope In this article, the available literature characterizing apomixis in Paspalum spp. and its use in breeding is critically reviewed. In particular, a comparison is made across species of the structure and function of the genomic region controlling apomixis in order to identify a common core region shared by all apomictic Paspalum species and where apomixis genes are likely to be localized. Candidate genes are discussed, either as possible genetic determinants (including homologs to signal transduction and RNA methylation genes) or as downstream factors (such as cell-to-cell signalling and auxin response genes) depending, respectively, on their co-segregation with apomixis or less. Strategies to validate the role of candidate genes in apomictic process are also discussed, with special emphasis on plant transformation in natural apomictic species. PMID:23864004

  4. Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance

    PubMed Central

    Chen, Yu; Chen, Chuanming; Tan, Zhiqun; Liu, Jun; Zhuang, Lili; Yang, Zhimin; Huang, Bingru

    2016-01-01

    Salinity-affected and heavy metal-contaminated soils limit the growth of glycophytic plants. Identifying genes responsible for superior tolerance to salinity and heavy metals in halophytes has great potential for use in developing salinity- and Cd-tolerant glycophytes. The objective of this study was to identify salinity- and Cd-tolerance related genes in seashore paspalum (Paspalum vaginatum), a halophytic perennial grass species, using yeast cDNA expression library screening method. Based on the Gateway-compatible vector system, a high-quality entry library was constructed, which contained 9.9 × 106 clones with an average inserted fragment length of 1.48 kb representing a 100% full-length rate. The yeast expression libraries were screened in a salinity-sensitive and a Cd-sensitive yeast mutant. The screening yielded 32 salinity-tolerant clones harboring 18 salinity-tolerance genes and 20 Cd-tolerant clones, including five Cd-tolerance genes. qPCR analysis confirmed that most of the 18 salinity-tolerance and five Cd-tolerance genes were up-regulated at the transcript level in response to salinity or Cd stress in seashore paspalum. Functional analysis indicated that salinity-tolerance genes from seashore paspalum could be involved mainly in photosynthetic metabolism, antioxidant systems, protein modification, iron transport, vesicle traffic, and phospholipid biosynthesis. Cd-tolerance genes could be associated with regulating pathways that are involved in phytochelatin synthesis, HSFA4-related stress protection, CYP450 complex, and sugar metabolism. The 18 salinity-tolerance genes and five Cd-tolerance genes could be potentially used as candidate genes for genetic modification of glycophytic grass species to improve salinity and Cd tolerance and for further analysis of molecular mechanisms regulating salinity and Cd tolerance. PMID:26904068

  5. Evidence for two distinct intracellular pools of inorganic sulfate in Penicillium notatum

    SciTech Connect

    Hunter, D.R.; Segel, I.H.

    1985-06-01

    A strain of Penicillium notatum unable to metabolize inorganic sulfate can accumulate sulfate internally to an apparent equilibrium concentration 10/sup 5/ times greater than that remaining in the medium. The apparent K/sub eq/ is near constant at all initial external sulfate concentrations below that which would eventually exceed the internal capacity of the cells. Under equilibrium conditions of zero net flux, external /sup 35/SO/sub 4//sup 2 -/ exchanges with internal, unlabeled SO/sub 4//sup 2 -/ at a rate consistent with the kinetic constants with the sulfate transport system. Efflux experiments demonstrated that sulfate occupies two distinct intracellular pools. Pool 1 is characterized by the rapid release of /sup 35/SO/sub 4//sup 2 -/ when the suspension of preloaded cells is adjusted to 10 mM azide at pH 8.4 (t/sub 1/2/, 0.38 min). /sup 35/SO/sub 4//sup 2 -/ in pool 1 also rapidly exchanges with unlabeled medium sulfate. Pool 2 is characterized by the slow release of /sup 35/SO/sub 4//sup 2 -/ induced by azide at pH 8.4 or unlabeled sulfate (t/sub 1/2/, 32 to 49 min). Early in the /sup 35/SO/sub 4//sup 2 -/ accumulation process, up to 78% of the total transported substrate is found in pool 1. At equilibrium, pool 1 accounts for only about 2% of the total accumulated /sup 35/SO/sub 4//sup 2 -/. Monensin (33 ..mu..m) accelerates the transfer of /sup 35/SO/sub 4//sup 2 -/ from pool 1 to pool 2. Valinomycin (0.2 ..mu..M) and tetraphynylboron/sup -/ (1 mM) retard the transfer of /sup 35/SO/sub 4//sup 2 -/ from pool 1 to pool 2. Pool 2 may reside in a vacuole or other intracellular organelle. A model for the transfer of sulfate from pool 1 to pool 2 is presented.

  6. Microdochium paspali, a new species causing seashore paspalum disease in southern China.

    PubMed

    Zhang, Wu; Nan, Zhibiao; Tian, Pei; Hu, Meijiao; Gao, Zhaoyin; Li, Min; Liu, Guodαo

    2015-01-01

    A new species of Microdochium was identified as the causal agent of leaf blight of seashore paspalum (Paspalum vaginatum), a turf grass widely used in tropical and subtropical golf courses. In 2010 foliar necrosis and canopy thinning were observed on 11 surveyed golf courses in Hainan province, China, especially on fairways and putting greens. The infected leaves initially appeared water-soaked and dark green, rapidly faded to yellow or became chlorotic and quickly died, resulting in a sparse appearance in infected areas, leading to the disease name "sparse leaf patch." Isolates with rich and light pink to yellow mycelia and salmon-colored pionnotes were cultured from diseased turf foliage. Pathogenicity was demonstrated by inoculating these isolates onto "seaspray" seashore paspalum. Phylogenetic analysis based on the nuc rDNA internal transcribed spacer 1-5.8S-internal transcribed spacer 2 region (ITS), translation elongation factor 1-α (TEF1-α) and β-tubulin (BenA) indicated these isolates formed as a distinct clade within Microdochium (Xylariales). Further microscopic examination demonstrated that the species was morphologically distinct from three similar species of Microdochium. The name Microdochium paspali sp. nov. is proposed for this novel fungal pathogen.

  7. Simulation of hypothetical Asian carp egg and larvae development and transport in the Lockport, Brandon Road, Dresden Island, and Marseilles Pools of the Illinois Waterway by use of the Fluvial Egg Drift Simulator (FluEgg) model

    USGS Publications Warehouse

    Murphy, Elizabeth A.; Garcia, Tatiana; Jackson, P. Ryan; Duncker, James J.

    2016-04-05

    As part of the Great Lakes and Mississippi River Interbasin Study, the U.S. Army Corps of Engineers (USACE) is conducting an assessment of the vulnerability of the Chicago Area Waterway System and Des Plaines River to Asian carp (specifically, Hypophthalmichthys nobilis (bighead carp) and Hypophthalmichthys molitrix (silver carp)) spawning and recruitment. As part of this assessment, the USACE requested the help of the U.S. Geological Survey in predicting the fate and transport of Asian carp eggs hypothetically spawned at the electric dispersal barrier on the Chicago Sanitary and Ship Canal and downstream of the Brandon Road Lock and Dam on the Des Plaines River under dry weather flow and high water temperature conditions. The Fluvial Egg Drift Simulator (FluEgg) model predicted that approximately 80 percent of silver carp eggs spawned near the electric dispersal barrier would hatch within the Lockport and Brandon Road pools (as close as 3.6 miles downstream of the barrier) and approximately 82 percent of the silver carp eggs spawned near the Brandon Road Dam would hatch in the Des Plaines River (as close as 1.6 miles downstream from the gates of Brandon Road Lock). Extension of the FluEgg model to include the fate and transport of larvae until gas bladder inflation—the point at which the larvae begin to leave the drift—suggests that eggs spawned at the electric dispersal barrier would reach the gas bladder inflation stage primarily within the Dresden Island Pool, and those spawned at the Brandon Road Dam would reach this stage primarily within the Marseilles and Starved Rock Pools.

  8. Effect of medium components and metabolic inhibitors on beta-galactosidase production and secretion by Penicillium notatum 1.

    PubMed

    Fiedurek, J; Gromada, A; Jamroz, J

    1996-01-01

    Factors affecting the beta-galactosidase production by Penicillium notatum 1 were studied using fermentation media of different chemical composition. The medium containing lactose, salts, peptone and yeast extract with initial pH 2.5 was selected as the best for enzyme production. Monobasic ammonium phosphate (0.9%) was found to be the best inorganic nitrogen source for lactase production. Various extraction media and metabolic inhibitors were examined for effective releasing of beta-galactosidase from the fungal cells. Using a simple method of mycelium extraction with 0.1 Triton X-100, it was possible to obtain about 4-fold higher amounts of enzyme in the cell free extracts, than those excreted into the post-culture liquid.

  9. High-level expression of the Penicillium notatum glucose oxidase gene in Pichia pastoris using codon optimization.

    PubMed

    Gao, Zhaowei; Li, Zhuofu; Zhang, Yuhong; Huang, Huoqing; Li, Mu; Zhou, Liwei; Tang, Yunming; Yao, Bin; Zhang, Wei

    2012-03-01

    The glucose oxidase (GOD) gene from Penicillium notatum was expressed in Pichia pastoris. The 1,815 bp gene, god-w, encodes 604 amino acids. Recombinant GOD-w had optimal activity at 35-40°C and pH 6.2 and was stable, from pH 3 to 7 maintaining >75% maximum activity after incubation at 50°C for 1 h. GOD-w worked as well as commercial GODs to improve bread making. To achieve high-level expression of recombinant GOD in P. pastoris, 272 nucleotides involving 228 residues were mutated, consistent with the codon bias of P. pastoris. The optimized recombinant GOD-m yielded 615 U ml(-1) (2.5 g protein l(-1)) in a 3 l fermentor--410% higher than GOD-w (148 U ml(-1)), and thus is a low-cost alternative for the bread baking industry.

  10. Plant regeneration through somatic embryogenesis from suspension culture-derived protoplasts of Paspalum scrobiculatum L.

    PubMed

    Nayak, P; Sen, S K

    1991-09-01

    Protoplasts were released from embryogenic suspension culture of Paspalum scrobiculatum and cultured in either liquid or semisolid KM medium supplemented with 2,4-D in the dark at 24°C with or without a feeder layer. Cell wall formation was observed in 75% of the plated protoplasts. Microcolonies developed after 10 d of culture, which in turn formed callus upon transfer to M-2 medium (Nayak and Sen, 1989). The highest plating effeciency (ca 7%) was obtained in thin-layer liquid culture. The macrocalli formed somatic embryos which regenerated to plantlets. The plantlets were grown to flowering plants upon transfer to soil.

  11. Oxidation of carbon sources via the tricarboxylic acid cycle during calcium-induced conidiation of Penicillium notatum.

    PubMed

    Pitt, D; Mosley, M J

    1986-01-01

    The TCA cycle was examined during Ca2+-induced conidiation in Penicillium notatum over the 12-h period after addition of Ca2+ to vegetative cultures. Conidiation was independent of Ca2+ when certain intermediates and derivatives of the TCA cycle served as sole carbon sources. Arsenite and malonate augmented the effect of Ca2+ on conidiation but did not substitute for it. Mitochondria from vegetative cells had low rates of oxidation of TCA cycle intermediates and, with the exception of pyruvate, aconitate and glutamate, these were poorly linked to phosphorylation processes. Calcium ions affected mitochondrial function causing reduced oxidation of oxoglutarate, elimination of pyruvate oxidation and a decline in respiratory control of these substrates with increased oxidation of NADH and NADPH. Radiorespirometric studies and enzyme searches revealed a complete but weakly oxidative TCA cycle in vegetative cells. In Ca2+-induced cells oxoglutarate dehydrogenase activity was deleted within 6.5 h of Ca2+ addition and this was accompanied by establishment of an 'incomplete Krebs cycle'. Calcium-induced conidiation was associated with increased capacity for acetate and glutamate metabolism involving an activated glyoxylate shunt which may be related to enhanced biosynthetic demand. The metabolic basis of the Ca2+ effect on conidiation is discussed in connection with previous findings.

  12. Host preference and suitability of grasses for Oebalus pugnax

    PubMed Central

    Awuni, GA; Gore, J; Cook, D; Bond, JA; Musser, FR; Adams, CA

    2014-01-01

    The rice stink bug, Oebalus pugnax (Fabricius) (Hemiptera: Pentatomidae: Carpocorini), though graminaceous, discriminates among its numerous host grass species. This could represent a feeding preference, it could be related to host suitability for growth and development. To clarify the role of host grass discrimination, two laboratory studies were conducted: (1) free-choice tests to evaluate preferences of O. pugnax among 11 wild host grass species found in three rice-producing counties of the central Mississippi Delta (MS, USA), and (2) no-choice tests to evaluate the impact of rice (Oryza sativa L.), junglerice [Echinochloa colona (L.) Link], and dallisgrass (Paspalum dilatatum Poir.) (all Poaceae), on the development of O. pugnax from second instar to adult. In the free-choice test, four experiments were conducted, each with four sets of host grass species and observed 1, 2, 4, 8, and 16 h after release in cages. Approximately 4 h was necessary for O. pugnax to settle on preferred host grasses. Oebalus pugnax showed a feeding preference for junglerice over all 10 other grass species. Bahiagrass, Paspalum notatum Flueggé, was the least preferred. The no-choice tests showed significant effect of host grass species on O. pugnax mean development time of nymphal survival to adults. Survival of nymphs was lower and mean development time was longer on dallisgrass compared to rice and junglerice. Knowledge of O. pugnax rate of growth and development on host grasses could be useful in the future development of rice integrated pest management strategies. PMID:25635144

  13. Saline Irrigation Affects Belonolaimus longicaudatus and Hoplolaimus galeatus on Seashore Paspalum

    PubMed Central

    Hixson, A. C.; Crow, W. T.; McSorley, R.; Trenholm, L.E.

    2005-01-01

    Seashore paspalum (Paspalum vaginatum) has great potential for use in salt-affected turfgrass sites. Use of this grass on golf courses, athletic fields, and lawns in subtropical coastal areas may aid in conservation of freshwater resources. Belonolaimus longicaudatus and Hoplolaimus galeatus are considered among the most damaging root pathogens of turfgrasses in Florida. Glasshouse experiments were performed in 2002 and 2003 to examine the effects of increasing levels of irrigation salinity on B. longicaudatus and H. galeatus. Irrigation treatments were formulated by concentrating deionized water to six salinity levels (0, 5, 10, 15, 20, and 25 dS/m). Final population densities of H. galeatus followed a negative linear regression (r² = 0.92 and 0.83; P <= 0.01) with increasing salinity levels. Final population densities of B. longicaudatus were quadratically (r² = 0.72 and 0.78; P <= 0.01) related to increasing salinity levels from 0 to 25 dS/m. An increase in population densities of B. longicaudatus was observed at moderate salinity levels (10 and 15 dS/m) compared to 0 dS/m. Root-length comparisons revealed that B. longicaudatus caused root stunting at low salinity levels, 0 to 10 dS/m, but roots were not affected at 15 to 25 dS/m. These results indicate that the ability of B. longicaudatus to feed and stunt root growth was negatively affected at salinity levels of 15 dS/m and above. PMID:19262841

  14. Cross-reactivity among antigens of different air-borne fungi detected by ELISA using five monoclonal antibodies against Penicillium notatum.

    PubMed

    Shen, H D; Lin, W L; Chen, R J; Han, S H

    1990-10-01

    Cross-reactivity among antigens of 12 genera of air-borne fungi, 13 species of Penicillium, and 5 species of Aspergillus was studied by ELISA using five monoclonal antibodies (MoAbs) against Penicillium notatum. Epitopes recognized by all the five MoAbs were susceptible to treatment of mild periodate oxidation and may therefore be associated with carbohydrates. Furthermore, our results showed that there is cross-reactivity among antigens of Penicillium, Aspergillus, and Eurotium species. By using these MoAbs, cross reactivity was not detected between antigens of Penicillium notatum and antigens of Fusarium solani, Alternaria porri, Cladosporium cladosporoides, Curvularia species, Nigrospora species, Aureobasidium pullulans, Wallemia species, Rhizopus arrhizus, and Candida albicans. Cross-reactivity among antigens of 11 species of Penicillium and 5 species of Aspergillus could be detected by ELISA using one of the five MoAbs (MoAb P15). The fact that there may be cross-reactivity among antigens of closely related fungi species should be considered in the diagnosis and treatment of mold allergic diseases.

  15. Dorsoventral variations in dark chilling effects on photosynthesis and stomatal function in Paspalum dilatatum leaves.

    PubMed

    Soares-Cordeiro, Ana Sofia; Driscoll, Simon P; Arrabaça, Maria Celeste; Foyer, Christine H

    2011-01-01

    The effects of dark chilling on the leaf-side-specific regulation of photosynthesis were characterized in the C(4) grass Paspalum dilatatum. CO(2)- and light-response curves for photosynthesis and associated parameters were measured on whole leaves and on each leaf side independently under adaxial and abaxial illumination before and after plants were exposed to dark chilling for one or two consecutive nights. The stomata closed on the adaxial sides of the leaves under abaxial illumination and no CO(2) uptake could be detected on this surface. However, high rates of whole leaf photosynthesis were still observed because CO(2) assimilation rates were increased on the abaxial sides of the leaves under abaxial illumination. Under adaxial illumination both leaf surfaces contributed to the inhibition of whole leaf photosynthesis observed after one night of chilling. After two nights of chilling photosynthesis remained inhibited on the abaxial side of the leaf but the adaxial side had recovered, an effect related to increased maximal ribulose-1,5-bisphosphate carboxylation rates (V(cmax)) and enhanced maximal electron transport rates (J(max)). Under abaxial illumination, whole leaf photosynthesis was decreased only after the second night of chilling. The chilling-dependent inhibition of photosynthesis was located largely on the abaxial side of the leaf and was related to decreased V(cmax) and J(max), but not to the maximal phosphoenolpyruvate carboxylase carboxylation rate (V(pmax)). Each side of the leaf therefore exhibits a unique sensitivity to stress and recovery. Side-specific responses to stress are related to differences in the control of enzyme and photosynthetic electron transport activities.

  16. Plant regeneration from callus of apomictic and sexual lines of Paspalum simplex and RFLP analysis of regenerated plants.

    PubMed

    Molinari, L; Busti, A; Calderini, O; Arcioni, S; Pupilli, F

    2003-07-01

    Culture conditions have been established for the induction of callus from different explants of Paspalum simplex. Fast-growing calli were obtained from hypocotyls and roots excised from 5-day-old seedlings on culture medium containing 2,4-dichlorophenoxyacetic acid and kinetin. Rapid plant regeneration from both apomictic and sexual lines was achieved when the medium was supplemented with alpha-naphthaleneacetic acid and benzylaminopurine. Restriction fragment length polymorphism analysis of the apomixis-controlling region of the regenerated plants showed an absence of restriction site variation for the loci analysed, whereas various degrees of variation were detected for the DNA methylation sites of the same loci.

  17. Vegetative Analysis of the Flookplain of the Trinity River, Texas,

    DTIC Science & Technology

    1974-09-30

    Fisch. & Mey. Baby blue-eyes Nemophila phacelioides Nutt. Bahia grass Paspalum notatum Flugge Baldwin ironweed Vernonia Baldwinii Torr. Balloon...dracunculoides (DC.) Shinners Broomweed Xanthocephalum texanum (DC.) Shinners Brownseed paspalum . Paspalum plicatulum Michx. Browntop panic grass Panicum...Filiformis (Lam.) Beauv. Redtop bentgrass Agrostis stolonifera L. Reflexed sedge Carex retroflexa Michx. Rescue grass Bromus unioloides H.B.K. Rice

  18. An apomixis-linked ORC3-like pseudogene is associated with silencing of its functional homolog in apomictic Paspalum simplex.

    PubMed

    Siena, Lorena A; Ortiz, Juan Pablo A; Calderini, Ornella; Paolocci, Francesco; Cáceres, Maria E; Kaushal, Pankaj; Grisan, Simone; Pessino, Silvina C; Pupilli, Fulvio

    2016-03-01

    Apomixis in plants consists of asexual reproduction by seeds. Here we characterized at structural and functional levels an apomixis-linked sequence of Paspalum simplex homologous to subunit 3 of the ORIGIN RECOGNITION COMPLEX (ORC3). ORC is a multiprotein complex which controls DNA replication and cell differentiation in eukaryotes. Three PsORC3 copies were identified, each one characterized by a specific expression profile. Of these, PsORC3a, specific for apomictic genotypes, is a pseudogene that was poorly and constitutively expressed in all developmental stages of apomictic flowers, whereas PsORC3b, the putative functional gene in sexual flowers, showed a precise time-related regulation. Sense transcripts of PsORC3 were expressed in the female cell lineage of both apomictic and sexual reproductive phenotypes, and in aposporous initials. Although strong expression was detected in sexual early endosperm, no expression was present in the apomictic endosperm. Antisense PsORC3 transcripts were revealed exclusively in apomictic germ cell lineages. Defective orc3 mutants of rice and Arabidopsis showed normal female gametophytes although the embryo and endosperm were arrested at early phases of development. We hypothesize that PsORC3a is associated with the down-regulation of its functional homolog and with the development of apomictic endosperm which deviates from the canonical 2(maternal):1(paternal) genome ratio.

  19. Gene Discovery and Molecular Marker Development, Based on High-Throughput Transcript Sequencing of Paspalum dilatatum Poir

    PubMed Central

    Giordano, Andrea; Cogan, Noel O. I.; Kaur, Sukhjiwan; Drayton, Michelle; Mouradov, Aidyn; Panter, Stephen; Schrauf, Gustavo E.; Mason, John G.; Spangenberg, German C.

    2014-01-01

    Background Paspalum dilatatum Poir. (common name dallisgrass) is a native grass species of South America, with special relevance to dairy and red meat production. P. dilatatum exhibits higher forage quality than other C4 forage grasses and is tolerant to frost and water stress. This species is predominantly cultivated in an apomictic monoculture, with an inherent high risk that biotic and abiotic stresses could potentially devastate productivity. Therefore, advanced breeding strategies that characterise and use available genetic diversity, or assess germplasm collections effectively are required to deliver advanced cultivars for production systems. However, there are limited genomic resources available for this forage grass species. Results Transcriptome sequencing using second-generation sequencing platforms has been employed using pooled RNA from different tissues (stems, roots, leaves and inflorescences) at the final reproductive stage of P. dilatatum cultivar Primo. A total of 324,695 sequence reads were obtained, corresponding to c. 102 Mbp. The sequences were assembled, generating 20,169 contigs of a combined length of 9,336,138 nucleotides. The contigs were BLAST analysed against the fully sequenced grass species of Oryza sativa subsp. japonica, Brachypodium distachyon, the closely related Sorghum bicolor and foxtail millet (Setaria italica) genomes as well as against the UniRef 90 protein database allowing a comprehensive gene ontology analysis to be performed. The contigs generated from the transcript sequencing were also analysed for the presence of simple sequence repeats (SSRs). A total of 2,339 SSR motifs were identified within 1,989 contigs and corresponding primer pairs were designed. Empirical validation of a cohort of 96 SSRs was performed, with 34% being polymorphic between sexual and apomictic biotypes. Conclusions The development of genetic and genomic resources for P. dilatatum will contribute to gene discovery and expression studies

  20. Specific expression of apomixis-linked alleles revealed by comparative transcriptomic analysis of sexual and apomictic Paspalum simplex Morong flowers.

    PubMed

    Polegri, Livia; Calderini, Ornella; Arcioni, Sergio; Pupilli, Fulvio

    2010-06-01

    Apomixis is defined as clonal reproduction by seed. A comparative transcriptomic analysis was undertaken between apomictic and sexual genotypes of Paspalum simplex Morong to identify apomixis-related polymorphisms at the level of mRNA. cDNA-AFLP (amplified fragment length polymorphism) profiling of apomictic and sexual flowers at several stages of development yielded 202 amplicons that showed several kinds of expression specificities. Among these, the large majority consisted of amplicons that were present only in specific stages of development of the apomictic flowers. Ten percent of polymorphic amplicons were present with almost identical intensity in all stages of the apomictic flowers and never in the sexual flowers. Reverse transcription-PCR (RT-PCR) and Southern analyses of these amplicons showed that they belong to constitutively expressed alleles that are specifically present on the apomixis-controlling locus of P. simplex. The most frequent biological functions inferred from the sequence homology of the apomixis-linked alleles were related to signal transduction and nucleic acid/protein-binding activities. Most of these apomixis-linked alleles showed nonsense and frameshift mutations, revealing their probable pseudogene nature. None of the amplicons that were present only in specific stages of development of the apomictic flowers co-segregated with apomixis, indicating they did not originate from additional apomictic alleles but more probably from differential regulation of the same allele in apomictic and sexual flowers. The molecular functions inferred from sequence analysis of these latter amplicons were related to seed storage protein and regulatory genes of various types. The results are discussed regarding the possible role in apomictic reproduction of the differentially expressed genes in relation to their specificity of expression and inferred molecular functions.

  1. Dredging Operations Technical Support Program. Long-Term Monitoring of Habitat Development at Upland and Wetland Dredged Material Disposal Sites 1974-1982.

    DTIC Science & Technology

    1985-07-01

    Asparagus officinale Asters Aster spp. Bagpod Sesbania vesicaria Bahia grass Paspalum notatum Bald cypress Taxodium distichum Barberry Berberis sp...Barley Hordeum vulgare Barnyard grass Bchniochloa crusgalli Barren bromegrass Bromus sterilis Bayberry Nyrica pensgivanica Beach morning glory Ipomoea...Rumex crispus Cypress bulrush Scizrpus cyperiznus Dallis grass Paspalum , dilatatuu Dandelion Taraxacum off icinal. Dayf lover Cowaelina sp. Deer pea

  2. An AFLP marker tightly linked to apomixis reveals hemizygosity in a portion of the apomixis-controlling locus in Paspalum simplex.

    PubMed

    Labombarda, Paola; Busti, Alessandra; Caceres, Maria Eugenia; Pupilli, Fulvio; Arcioni, Sergio

    2002-06-01

    A mapping population of Paspalum simplex segregating for apomixis (asexual reproduction through seeds) was screened with AFLPs to find apomixis-linked markers. Four AFLPs linked to apomixis in coupling phase were found. Three of them did not show recombinants among the 87 individuals of the mapping population, whereas the other was more loosely linked. Integrating the AFLP data with those obtained previously with rice RFLP anchor markers, a map was drawn for the chromosome region of P. simplex encompassing apomixis. We cloned the three AFLPs tightly linked with apomixis into plasmid vectors and used them as probes to hybridize the restriction digested DNA of the mapping population. Two of them revealed RFLP bands linked to apomixis together with other alleles, whereas one was proven to belong to a hemizygous portion of the apomixis locus. The total picture resulting from AFLP and RFLP analyses was that a cluster of markers tightly linked with apomixis was detected in P simplex together with two other markers that were more loosely linked. These two markers enclosed a relatively large chromosome segment characterized by strong repression of recombination. The block of recombination may have caused sequence divergence and, therefore, hemizygosity of some regions belonging to the apomixis-controlling chromosome segment of P. simplex. The potential of developing an apomixis-specific sequence for screening large-fragment libraries for the physical isolation of the locus encompassing apomixis is discussed.

  3. Molecular cytogenetics and DNA sequence analysis of an apomixis-linked BAC in Paspalum simplex reveal a non pericentromere location and partial microcolinearity with rice.

    PubMed

    Calderini, Ornella; Chang, Song B; de Jong, Hans; Busti, Alessandra; Paolocci, Francesco; Arcioni, Sergio; de Vries, Sacco C; Abma-Henkens, Marleen H C; Lankhorst, Renè M Klein; Donnison, Iain S; Pupilli, Fulvio

    2006-04-01

    Apomixis in plants is a form of clonal reproduction through seeds. A BAC clone linked to apomictic reproduction in Paspalum simplex was used to locate the apomixis locus on meiotic chromosome preparations. Fluorescent in situ hybridisation revealed the existence of a single locus embedded in a heterochromatin-poor region not adjacent to the centromere. We report here for the first time information regarding the sequencing of a large DNA clone from the apomixis locus. The presence of two genes whose rice homologs were mapped on the telomeric part of the long arm of rice chromosome 12 confirmed the strong synteny between the apomixis locus of P. simplex with the related area of the rice genome at the map level. Comparative analysis of this region with rice as representative of a sexual species revealed large-scale rearrangements due to transposable elements and small-scale rearrangements due to deletions and single point mutations. Both types of rearrangements induced the loss of coding capacity of large portions of the "apomictic" genes compared to their rice homologs. Our results are discussed in relation to the use of rice genome data for positional cloning of apomixis genes and to the possible role of rearranged supernumerary genes in the apomictic process of P. simplex.

  4. EVALUATION OF COMPONENTS FOR HARDWOOD SILVOPASTORES FOR COW-CALF OPERATORS IN THE SOUTHEASTERN UNITED STATES

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Silvopasture systems consisting of bahiagrass (Paspalum notatum) and pines (Pinus spp.) are common in the southeastern United States. However, some producers prefer other forages to bahiagrass and there are increasing opportunities for marketing hardwoods in the region. Warm season forages and hardw...

  5. Response of a southeastern U.S. bahiagrass pasture to elevated atmospheric CO2 and N fertilization

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In the Southeastern US both managed and unmanaged pasture systems remain understudied agro-ecosystems in terms of the effects of elevated atmospheric CO2 concentration. Therefore, we initiated a long-term study of bahiagrass (Paspalum notatum Flüggé) response to elevated CO2 using open top field cha...

  6. Expression of crylFa in bahiagrass enhances resistance to fall armyworm

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bahiagrass (Paspalum notatum var. Flugge) is the predominant forage grass in Florida and in subtropical regions worldwide. To improve pest resistance against fall armyworm (Spodoptera frugiperda J. E. Smith), an optimized cry1Fa gene encoding a '-endotoxin from Bacillus thuringiensis was synthesized...

  7. Recommended Species for Vegetative Stabilization of Training Lands in Arid and Semi-Arid Environments

    DTIC Science & Technology

    1985-09-01

    semibacata Awnless bush sunflower Helianthus sp. Bahia grass Paspalum notatum Barley Hordeum vulgare Basin wildrye Elymus cinereus Bearded wheatgrass...Boer lovegrass Eragrostis curvuLa *Brittlebush Encelia farinosa *Brome grasses Bromus spp. Buckwheat s Eriogonum spp. Buffalograss Buchloe dactyloides...mexicana *Millets Panicum spp. Mountain brome Bromus montanum Mountain mahogany Gercocarpus montanus *Mountain penstenion Penstemon montanus *Muhly grasses

  8. Long-term pasture under elevated CO2 and N management: CO2 flux patterns upon return to cultivation

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Soil CO2 efflux patterns associated with converting pastures back to row crop production remain understudied in the Southeastern US. A 10-year study of bahiagrass (Paspalum notatum Flüggé) response to elevated CO2 was conducted using open top field chambers on a Blanton loamy sand (loamy siliceous, ...

  9. Effects of elevated atmospheric CO2 and N fertilization on bahiagrass pastures in the Southeastern U.S.

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of elevated atmospheric CO2 on pasture systems remain understudied in the Southeastern US. A 10-year study of bahiagrass (Paspalum notatum Flüggé) response to elevated CO2 was established in 2005 using open top field chambers on a Blanton loamy sand (loamy siliceous, thermic, Grossarenic...

  10. Adaxial/abaxial specification in the regulation of photosynthesis and stomatal opening with respect to light orientation and growth with CO2 enrichment in the C4 species Paspalum dilatatum.

    PubMed

    Soares, Ana Sofia; Driscoll, Simon P; Olmos, Enrique; Harbinson, Jeremy; Arrabaça, Maria Celeste; Foyer, Christine H

    2008-01-01

    Whole-plant morphology, leaf structure and composition were studied together with the effects of light orientation on the dorso-ventral regulation of photosynthesis and stomatal conductance in Paspalum dilatatum cv. Raki plants grown for 6 wk at either 350 or 700 microl l(-1) CO(2). Plant biomass was doubled as a result of growth at high CO(2) and the shoot:root ratio was decreased. Stomatal density was increased in the leaves of the high CO(2)-grown plants, which had greater numbers of smaller stomata and more epidermal cells on the abaxial surface. An asymmetric surface-specific regulation of photosynthesis and stomatal conductance was observed with respect to light orientation. This was not caused by dorso-ventral variations in leaf structure, the distribution of phosphoenolpyruvate carboxylase (PEPC) and ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) proteins or light absorptance, transmittance or reflectance. Adaxial/abaxial specification in the regulation of photosynthesis results from differential sensitivity of stomatal opening to light orientation and fixed gradients of enzyme activation across the leaf.

  11. Gopher Tortoise Survey Handbook

    DTIC Science & Technology

    2009-03-01

    Paspalum notatum) pasture, a sand ridge with sand live oak scrub, and a patch of mature longleaf pine designated in the above figure as tortoise habitat...The work was completed under the direction of the Ecological Process Branch (CN-N) of the Installations Division (CN), Construction Engineer- ing...patterns of desert tortoises at multiple spatial scales. Chelonian Conservation and Biology 4:366–379. Martin, P. L., and J. L. Layne. 1987

  12. Ground Water Issue: Phytoremediation of Contaminated Soil and Ground Water at Hazardous Waste Sites

    DTIC Science & Technology

    2001-02-01

    2000 Soil Phytoextraction 100 Bq 137Cs/g soil 112 Bq 90Sr/g soil Bahia grass ( Paspalum notatum), johnson grass (Sorghum halpense), switchgrass (Panicum...15% in shoots after 155 days in the presence of grass (Qiu et al., 1994); in another study, minimal uptake of PCP by several plants was seen (Bellin...will be used interchangeably to indicate all plant life, whether trees, grasses , shrubs, or other forms). Phytoextraction Phytoextraction is contaminant

  13. Polyploidy and Interspecific Hybridization in Cynodon, Paspalum, Pennisetum, and Zoysia

    Technology Transfer Automated Retrieval System (TEKTRAN)

    There are many examples of agronomically or economically important characteristics in wild species, such as disease tolerance or quality, that are difficult to incorporate into related cultivated species due to differences in ploidy levels. Sterility, or at least reduced fertility, is common when w...

  14. Development of a Methodology for Preparing Performance Standards for Operation and Maintenance Activities at Corps of Engineers Recreation Areas.

    DTIC Science & Technology

    1980-09-01

    mixture each kind mixture 1 2 3 4 ’Pensacola’ Bahiagrass ( Paspalum notatum) 60 78 46.8 Bermudagrass (Cynodon dactylon) 40 82 32.8 Total pure live seed in...Technical Director was Mr. F. R. Brown . Acc ssion For NTIS GRAM JDC T.A0 kMumounced Justificatio Distribut on/ jl ?O.ty Codes Avail and/or Me~t Spec &I...ft. acre 0.31 Rotary, 5 ft. acre 0.90 Rotary, 6 to 8 ft. acre 0.64 Reforestation: Hand planting acre 6.16 Machine planting acre 0.88 Seeding acre 1.54

  15. Accumulation of heavy metals in four grasses grown on lead and zinc mine tailings.

    PubMed

    Shu, Wen-Sheng; Zhao, Yun-Lin; Yang, Bing; Xia, Han-Ping; Lan, Chong-Yu

    2004-01-01

    A field experiment was conducted to compare the growth and metal accumulation of Vetiveria zizanioides, Paspalum notatum, Cynodon dactylon and Imperata cylindraca var. major on the tailings, amended with 10 cm domestic refuse + complex NPK fertilizer(Treatment A), 10 cm domestic refuse(Treatment B) and complex NPK fertilizer (Treatment C) respectively, and without any amendment used as control (Treatment D). The results indicated that V. zizanioides was a typical heavy metal excluder, because the concentrations in shoots of the plants were the lowest among the four plants tested. The most of metal accumulated in V. zizanioides distributed in its root, and transportation of metal in this plant from root to shoot was restricted. Therefore, V. zizanioides was more suitable for phytostabilization of toxic mined lands than P. notatum and C. dactylon, which accumulated a relatively high level of metals in their shoots and roots. It was also found that I. cylindraca var. major accumulated lower amounts of Pb, Zn and Cu than C. dactylon and P. notatum, and could also be considered for phytostalilisaton of tailings. Although the metal(Pb, Zn and Cu) concentrations in shoots and roots of V. zizanioides were the lowest, the total amounts of heavy metals accumulated in shoots of V. zizanioides were the highest among the four tested plants due to the highest dry weight yield of it. The results indicated that V. zizanioides was the best choice among the four species used for phytoremediation (for both phytostabilization and phytoextraction) of metal contaminated soils.

  16. Effect of Soils from Six Management Systems on Root-knot Nematodes and Plant Growth in Greenhouse Assays

    PubMed Central

    Kokalis-Burelle, N.; Chellemi, D. O.; Périès, X.

    2005-01-01

    The effects of soil management systems on root-knot nematode (Meloidogyne incognita) eggs and gall incidence on tomato (Lycopersicon esculentum) and cucumber (Cucumis sativus) following tomato were evaluated. Soil was collected from a replicated field experiment in which six management systems were being assessed for vegetable production. Soil management systems were conventional production, organic production, bahiagrass (Paspalum notatum) pasture, bahiagrass: Stylosanthes (Stylosanthes guianensis) pasture, bare ground fallow, and weed fallow. Soil was collected from field plots and used in greenhouse experiments. Identification of egg-parasitic fungi and the incidence of root-knot nematode galling were assessed both on tomato and cucumber planted in the same pots following the removal of tomato plants. Organic, bare ground fallow and conventional production treatments reduced galling both on tomato and on cucumber following tomato. Although no treatment consistently enhanced egg-parasitic fungi, management system did affect egg viability and the types of fungi isolated from parasitized eggs. PMID:19262892

  17. Bahiagrass for the Management of Meloidogyne arenaria in Peanut

    PubMed Central

    Rodríguez-Kábana, R.; Weaver, C. F.; Robertson, D. G.; Ivey, H.

    1988-01-01

    Bahiagrass (Paspalum notatum) cultivars Argentine, Pensacola, and Tifton-9 were non-hosts for Meloidogyne arenaria, M. incognita, and Heterodera glycines in a greenhouse experiment using field soil infested with these nematodes. The effect of Pensacola bahiagrass in rotation with peanut (Arachis hypogaea) on M. arenaria was studied in 1986 and 1987 in a field at the Wiregrass substation near Headland, Alabama. Each year soil densities of second-stage juveniles of M. arenaria, determined near peanut harvest, were 96-98% lower under bahiagrass than under peanut. In 1987 peanut yields in plots following bahiagrass were 27% higher than in plots under peanut monoculture. Juvenile population densities in bahiagrass-peanut plots were 41% lower than in plots with continuous peanut. Using bahiagrass for reducing population densities of M. arenaria and increasing peanut yield was as effective as using aldicarb at the recommended rates for peanut. PMID:19290315

  18. [Seasonal variation of light fraction organic matter in degraded red soil after vegetation restoration].

    PubMed

    Xie, Jin-Sheng; Yang, Yu-Sheng; Yang, Zhi-Jie; Huang, Shi-De; Chen, Guang-Shui

    2008-03-01

    This paper studied the seasonal variation of light fraction organic matter (LFOM) in the red soils of severely eroded bare land, and of the bare lands restored to Pinus massoniana forest land, Castanea mollissima plantation, and Paspalum notatum grassland in the Hetian Town of Changting County, Fujian Province, with secondary forest soil as the control. The results showed that in the surface soil of the bare land, LFOM content was between 0.05-0.14 g x kg(-1) and with no significant seasonal variation, while in that of P. massoniana forest land, C. mollissima plantation and P. notatum grassland, LFOM content had a distinct seasonal variation, and was 58%-122% higher in spring, autumn, and winter than in summer. The C content and C/N ratio of the LFOM in the three restored lands were lower in summer than in other seasons, while the nitrogen content of the LFOM was in adverse, indicating that the high temperature and humidity in summer induced a rapid decomposition of soil LFOM. The LFOM in secondary forest soil had the similar variation trend to that in the three restored lands, but the variation range was significantly narrower. The seasonal dynamics of surface soil LFOM was affected not only by micro-climate but also by vegetation types, and the variation range was greater in P. notatum grassland than in forest lands. It was suggested that to enhance the observation precision of soil LFOM, repeated sampling or integrating the factors such as climate, vegetation type, and management measures should be taken to determine the appropriate sampling time.

  19. Ruminal release of minerals from six forage species.

    PubMed

    Emanuele, S M; Staples, C R

    1990-07-01

    An in vitro technique and an in situ technique were used to measure release of Ca, Mg, P and Zn over time from hand-clipped alfalfa (Medicago sativa L.). Maximal release of P and Zn was greater using the in situ technique. 'Florida 77' alfalfa (Medicago sativa L.), 'Florigraze' rhizoma peanut (Arachis glabrata Benth.), 'Mott' dwarf elephantgrass (Pennisetum purpureum Schum.), 'Tifton 78' bermudagrass (Cynodon dactylon (L) Pers.), 'Pensacola' bahiagrass (Paspalum notatum Flugge) and 'Floralta' limpograss (Hemarthria altissima (Poir.) Stapf and Hubbard) were used to examine the ruminal release of Ca, Mg, P, K, Cu and Zn by means of the in situ technique. Minerals were ranked from highest to lowest for extent of immediate and maximal release in the rumen. Averaged across forage species, ranking was K at 100% and 100%, Mg at 82% and 95%, Cu at 71% and 84%, P at 66% and 80%, Zn at 26% and 69% and Ca at 29% and 70%. A large proportion of Ca was associated with the plant cell wall, based on the duration of incubation time needed to maximize its release and the large fractinal amount of Ca slowly released. A large portion of the Zn was released slowly as well (mean, 43.8%), but release of Zn was maximal in less than 24 h. Most of the Mg, K, P and Cu probably reside in the cell contents. Forages with high NDF concentrations can have high release coefficients for their minerals.

  20. Production of Vesicular-Arbuscular Mycorrhizal Fungus Inoculum in Aeroponic Culture †

    PubMed Central

    Hung, Ling-Ling L.; Sylvia, David M.

    1988-01-01

    Bahia grass (Paspalum notatum) and industrial sweet potato (Ipomoea batatas) colonized by Glomus deserticola, G. etunicatum, and G. intraradices were grown in aeroponic cultures. After 12 to 14 weeks, all roots were colonized by the inoculated vesicular-arbuscular mycorrhizal fungi. Abundant vesicles and arbuscules formed in the roots, and profuse sporulation was detected intra-and extraradically. Within each fungal species, industrial sweet potato contained significantly more roots and spores per plant than bahia grass did, although the percent root colonization was similar for both hosts. Mean percent root colonization and sporulation per centimeter of colonized root generally increased with time, although with some treatments colonization declined by week 14. Spore production ranged from 4 spores per cm of colonized root for G. etunicatum to 51 spores per cm for G. intraradices. Infectivity trials with root inocula resulted in a mean of 38, 45, and 28% of bahia grass roots colonized by G. deserticola, G. etunicatum, and G. intraradices, respectively. The germination rate of G. etunicatum spores produced in soil was significantly higher than that produced in aeroponic cultures (64% versus 46%) after a 2-week incubation at 28°C. However, infectivity studies comparing G. etunicatum spores from soil and aeroponic culture indicated no biological differences between the spore sources. Aeroponically produced G. deserticola and G. etunicatum inocula retained their infectivity after cold storage (4°C) in either sterile water or moist vermiculite for at least 4 and 9 months, respectively. PMID:16347548

  1. Floristic and structural patterns in South Brazilian coastal grasslands.

    PubMed

    Menezes, Luciana S; Müller, Sandra C; Overbeck, Gerhard E

    2015-01-01

    The natural vegetation of Southern Brazil's coastal region includes grasslands formations that are poorly considered in conservation policy, due to the lack of knowledge about these systems. This study reports results from a regional-scale survey of coastal grasslands vegetation along a 536 km gradient on southern Brazil. We sampled 16 sites along the coastal plain with 15 plots (1 m²) per site. All sites were grazed by cattle. We estimated plant species cover, vegetation height, percentage of bare soil, litter and manure, and classified species according to their growth forms. We found 221 species, 14 of them exotic and two threatened. The prostate grasses: Axonopus aff.affinis, Paspalum notatum and P. pumilumwere among the most important species. Prostrate graminoids species represented the most important vegetation cover, followed by cespitose grasses. Vegetation height, bare soil, litter and manure were similar among all areas, highlighting the homogeneity of sampling sites due to similar management. In comparison to other grasslands formations in Southern Brazil, the coastal grasslands presented rather low species richness. The presence of high values for bare soil at all sampling sites indicates the need to discuss management practices in the region, especially with regard to the intensity of livestock grazing.

  2. Velvetbean and Bahiagrass as Rotation Crops for Management of Meloidogyne spp. and Heterodera glycines in Soybean

    PubMed Central

    Weaver, D. B.; Rodríguez-Kábana, R.; Carden, E. L.

    1998-01-01

    Soybean (Glycine max) yield often is limited by the phytoparasitic nematodes Meloidogyne spp. and Heterodera glycines in the southeastern United States. We studied the effects of rotation with bahiagrass (Paspalum notatum), velvetbean (Mucuna pruiens), or continuous soybean, aldicarb, and soybean cultivar on yield and population densities in two fields infested with a mixture of Meloidogyne spp. and H. glycines. Velvetbean and bahiagrass reduced population levels of both nematode species to near zero prior to planting soybean. At harvest, both nematode populations were equal in soybean following bahiagrass and continuous soybean but were lower following velvetbean. Both bahiagrass and velvetbean as previous crops were equal in producing significantly (P < 0.003) higher yield than continuous soybean. Velvetbean increased subsequent soybean yield by 98% and bahiagrass increased subsequent soybean yield by 85% as previous crops compared to continuous soybean. The major differences between the two rotation crops were yield response of the nematode-susceptible cultivars and at-harvest nematode populations. Velvetbean tended to mask genetic differences among cultivars more so than bahiagrass. Velvetbean also produced a more long-term effect on nematode populations, with numbers of both Meloidogyne spp. and H. glycines lower in soybean following velvethean than following bahiagrass or continuous soybean. PMID:19274247

  3. Production of native arbuscular mycorrhizal fungi inoculum under different environmental conditions.

    PubMed

    Torres-Arias, Yamir; Fors, Rosalba Ortega; Nobre, Camila; Gómez, Eduardo Furrazola; Berbara, Ricardo Luis Louro

    In order to obtain an arbuscular mycorrhizal fungi (AMF) native inoculum from Sierra de Moa and determine the most appropriate conditions for its big scale production, four light and temperature combinations were tested in three plant species (Calophyllum antillanum, Talipariti elatum and Paspalum notatum). Growth and development parameters, as well as the mycorrhizal functioning of the seedlings were evaluated. The natural light treatment under high temperatures (L-H) was the most suitable for the growth and development of the three plant species, showing the highest total biomass values, mainly of root, and a positive root-shoot ratio balance. This treatment also promoted higher values of root mycorrhizal colonization, external mycelium and AMF spore density. A total of 38 AMF species were identified among the plants and environmental conditions tested. Archaeospora sp.1, Glomus sp.5, Glomus brohultii and G. glomerulatum were observed in all the treatments. The L-H condition can be recommended for native inoculum production, as it promotes a better expression of the AM symbiosis and an elevated production of mycorrhizal propagules.

  4. On-farm production of inoculum of indigenous arbuscular mycorrhizal fungi and assessment of diluents of compost for inoculum production.

    PubMed

    Douds, David D; Nagahashi, Gerald; Hepperly, Paul Reed

    2010-04-01

    On-farm production of arbuscular mycorrhizal [AM] fungus inoculum can be employed to make the benefits of the symbiosis more available to vegetable farmers. Experiments were conducted to modify an existing method for the production of inoculum in temperate climates to make it more readily adoptable by farmers. Perlite, vermiculite, and peat based potting media were tested as diluents of yard clippings compost for the media in which the inoculum was produced using bahiagrass (Paspalum notatum Flugge) as host plant. All produced satisfactory concentrations of AM fungus propagules, though vermiculite proved to be better than potting media (89 vs. 25 propagules cm(-3), respectively). Two methods were tested for the growth of AM fungi indigenous to the farm: (1) adding field soil into the vermiculite and compost mixture and (2) pre-colonizing the bahiagrass seedlings in media inoculated with field soil prior to transplant into that mixture. Adding 100 cm(3) of field soil to the compost and vermiculite produced 465 compared to 137 propagules cm(-3) for the pre-colonization method. The greater flexibility these modifications give will make it easier for farmers to produce inoculum of AM fungi on-the-farm.

  5. On-farm production of AM fungus inoculum in mixtures of compost and vermiculite.

    PubMed

    Douds, D D; Nagahashi, G; Pfeffer, P E; Reider, C; Kayser, W M

    2006-04-01

    On-farm production of arbuscular mycorrhizal (AM) fungus inoculum can reduce the cost of the inoculum and increase utilization of this symbiosis in plant production. Bahiagrass (Paspalum notatum Flugge) seedlings, colonized by AM fungi, were transplanted into raised bed enclosures. Media within the enclosures was vermiculite mixed with either field soil or yard clippings compost in Experiment I and vermiculite mixed with yard clippings compost or dairy manure/leaf compost in Experiment II. Compost and vermiculite mixtures yielded more propagules of AM fungi than soil-based mixtures in Experiment I. Growth of plants in a 1:4 (v/v) mixture of yard clippings compost and vermiculite produced more inoculum (503 propagules cm(-3)) than growth in 1:9 and 1:99 (v/v) mixtures (240 and 42 propagules cm(-3), respectively). Water, inorganic nutrient solution minus P, and fish protein digest were added to inoculum production enclosures in Experiment II. Results indicated that supplemental nutrient addition was unnecessary. This method produces a concentrated inoculum of AM fungi in a form readily used as an amendment to horticultural potting media for the production of vegetable seedlings.

  6. Comparative plant uptake and microbial degradation of trichloroethylene in the rhizospheres of five plant species-- implications for bioremediation of contaminated surface soils

    SciTech Connect

    Anderson, T.A. ); Walton, B.T. )

    1992-01-01

    The objective of this study was to collect data that would provide a foundation for the concept of using vegetation to enhance in situ bioremediation of contaminated surface soils. Soil and vegetation (Lespedeza cuneata, Paspalum notatum, Pinus taeda, and Solidago sp.) samples from the Miscellaneous Chemicals Basin (MCB) at the Savannah River Site were used in tests to identify critical plant and microbiological variables affecting the fate of trichloroethylene (TCE) in the root zone. Microbiological assays including phospholipid acid analyses, and {sup 14}C-acetate incorporation were conducted to elucidate differences in rhizosphere and nonvegetated soil microbial communities from the MCB. The microbial activity, biomass, and degradation of TCE in rhizosphere soils were significantly greater than corresponding nonvegetated soils. Vegetation had a positive effect on microbial degradation of {sup 14}C-TCE in whole-plant experiments. Soils from the MCB containing Lespedeza cuneata, Pinus taeda, and Glycine max mineralized greater than 25% of the {sup 14}C- TCE added compared with less than 20% in nonvegetated soils. Collectively, these results provide evidence for the positive role of vegetation in enhancing biodegradation.

  7. Environmental Inventory and Analysis for Pine Bluff, Arkansas. Volume II. Appendices. Pine Bluff Metropolitan Area, Arkansas Urban Water Management Study. Revised.

    DTIC Science & Technology

    1975-10-01

    Grass D-22 Table D-2 (continued)4 4 Arundinaria gigantea Wet areas Cane Bromus racemosus Open areas, old fields Br-me Grass ...sandy soil U Panic Grass Panicum scoparium Moist woods, sandy soil C Panic Grass Panicum virgatum Moist open areas C Panic Grass Paspalum floridanum...Moist open areas C Paspalum Paspalum laeve Open woods U Paspalum Paspalum urvillei Moist disturbed areas C Vasey Grass Setaria lutesens Fields,

  8. Phytoextraction of lead-contaminanted soil using Vetiver grass (Vetiveria Zizanioides L.), Cogongrass (Imperata cylindrica L.) and Caraboagrass (Paspalum conjugatum L.)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The global problem concerning contamination of the environment as a consequence of human activities is increasing. Most of the environmental contaminants are chemical by-products and heavy metals such as lead (Pb). Lead released into the environment makes its way into the air, soil and water. Lead c...

  9. Soil organic carbon and nitrogen accumulation in plots of rhizoma perennial peanut and bahiagrass grown in elevated carbon dioxide and temperature.

    PubMed

    Allen, Leon Hartwell; Albrecht, Stephan L; Boote, Kenneth J; Thomas, Jean M G; Newman, Yoana C; Skirvin, Katherine W

    2006-01-01

    Carbon sequestration in soils might mitigate the increase of carbon dioxide (CO2) in the atmosphere. Two contrasting subtropical perennial forage species, bahiagrass (BG; Paspalum notatum Flügge; C4), and rhizoma perennial peanut (PP; Arachis glabrata Benth.; C3 legume), were grown at Gainesville, Florida, in field soil plots in four temperature zones of four temperature-gradient greenhouses, two each at CO2 concentrations of 360 and 700 micromol mol(-1). The site had been cultivated with annual crops for more than 20 yr. Herbage was harvested three to four times each year. Soil samples from the top 20 cm were collected in February 1995, before plant establishment, and in December 2000 at the end of the project. Overall mean soil organic carbon (SOC) gains across 6 yr were 1.396 and 0.746 g kg(-1) in BG and PP, respectively, indicating that BG plots accumulated more SOC than PP. Mean SOC gains in BG plots at 700 and 360 micromol mol(-1) CO2 were 1.450 and 1.343 g kg(-1), respectively (not statistically different). Mean SOC gains in PP plots at 700 and 360 micromol mol(-1) CO2 were 0.949 and 0.544 g kg(-1), respectively, an increase caused by elevated CO2. Relative SON accumulations were similar to SOC increases. Overall mean annual SOC accumulation, pooled for forages and CO2 treatments, was 540 kg ha(-1) yr(-1). Eliminating elevated CO2 effects, overall mean SOC accumulation was 475 kg ha(-1) yr(-1). Conversion from cropland to forages was a greater factor in SOC accumulation than the CO2 fertilization effect.

  10. Persistence and Suppressiveness of Pasteuria penetrans to Meloidogyne arenaria Race

    PubMed Central

    Cetintas, R.; Dickson, D. W.

    2004-01-01

    The long-term persistence and suppressiveness of Pasteuria penetrans against Meloidogyne arenaria race 1 were investigated in a formerly root-knot nematode suppressive site following 9 years of continuous cultivation of three treatments and 4 years of continuous peanut. The three treatments were two M. arenaria race 1 nonhost crops, bahiagrass (Paspalum notatum cv. Pensacola var. Tifton 9), rhizomal peanut (Arachis glabrata cv. Florigraze), and weed fallow. Two root-knot nematode susceptible weeds commonly observed in weed fallow plots were hairy indigo (Indigofera hirsuta) and alyce clover (Alysicarpus vaginalis). The percentage of J2 with endospores attached reached the highest level of 87% in 2000 in weed fallow, and 63% and 53% in 2002 in bahiagrass and rhizomal peanut, respectively. The percentage of endospore-filled females extracted from peanut roots grown in weed fallow plots increased from nondetectable in 1999 to 56% in 2002, whereas the percentages in bahiagrass and rhizomal peanut plots were 41% and 16%, respectively. Over 4 years, however, there was no strong evidence that endospores densities reached suppressive levels because peanut roots, pods, and pegs were heavily galled, and yields were suppressed. This might be attributed to the discovery of M. javanica infecting peanut in this field in early autumn 2001. A laboratory test confirmed that although the P. penetrans isolate specific to M. arenaria attached to M. javanica J2, no development occurred. In summary, P. penetrans increased on M. arenaria over a 4-year period, but apparently because of infection of M. javanica on peanut at the field site root-knot disease was not suppressed. This was confirmed by a suppressive soil test that showed a higher level of soil suppressiveness than occurred in the field (P ≤ 0.01). PMID:19262836

  11. Nutritive value, fermentation characteristics, and in situ disappearance kinetics of ensiled warm-season legumes and bahiagrass.

    PubMed

    Foster, J L; Carter, J N; Sollenberger, L E; Blount, A R; Myer, R O; Maddox, M K; Phatak, S C; Adesogan, A T

    2011-04-01

    This study determined the nutritive value, ensiling characteristics, and in situ disappearance kinetics of bahiagrass (Paspalum notatum Flügge 'Tifton 9'), perennial peanut (Arachis glabrata Benth. 'Florigraze'), annual peanut [Arachis hypogaea (L.) 'FL MDR 98'], cowpea [Vigna unguiculata (L.) Walp. 'Iron clay'], and pigeonpea [Cajanus cajan (L.) Millsp. 'GA-2']. All forages were harvested at maturity stages that optimized dry matter (DM) yield and nutritive value. After harvest, forages were wilted to 45% DM, and 4 replicate bales of each legume and 8 bales of bahiagrass were wrapped in polyethylene and ensiled for 180 d. After each bale was opened, the forage was thoroughly mixed, and representative subsamples were taken for laboratory analysis and in situ incubation. Wilting and ensiling decreased the rumen-undegradable protein, water-soluble carbohydrate, crude protein (CP), and in vitro true digestibility (IVTD) of bahiagrass, perennial peanut, and cowpea, and increased their neutral detergent fiber (NDF) concentrations. Among haylages, CP concentration was greatest for annual peanut, followed by perennial peanut and cowpea, and least for bahiagrass. In contrast, NDF concentration was greater in bahiagrass than in legumes. Pigeonpea had the greatest NDF concentration among legumes and lowest IVTD of all haylages. All haylages were aerobically stable for at least 84 h, but pH was lower in perennial peanut and cowpea than in pigeonpea. Ammonia-N concentrations tended to be greater in legume haylages than in bahiagrass haylage. Butyrate concentration was greater in annual and perennial peanut than in bahiagrass. Total VFA concentration was greater in annual and perennial peanut and cowpea haylages than in bahiagrass haylage. Undegradable DM fractions were greater and extent of DM degradation was lower in bahiagrass and pigeonpea than in other haylages but lag time and degradation rates did not differ. Annual and perennial peanut and cowpea haylages were as

  12. Persistence and Suppressiveness of Pasteuria penetrans to Meloidogyne arenaria Race.

    PubMed

    Cetintas, R; Dickson, D W

    2004-12-01

    The long-term persistence and suppressiveness of Pasteuria penetrans against Meloidogyne arenaria race 1 were investigated in a formerly root-knot nematode suppressive site following 9 years of continuous cultivation of three treatments and 4 years of continuous peanut. The three treatments were two M. arenaria race 1 nonhost crops, bahiagrass (Paspalum notatum cv. Pensacola var. Tifton 9), rhizomal peanut (Arachis glabrata cv. Florigraze), and weed fallow. Two root-knot nematode susceptible weeds commonly observed in weed fallow plots were hairy indigo (Indigofera hirsuta) and alyce clover (Alysicarpus vaginalis). The percentage of J2 with endospores attached reached the highest level of 87% in 2000 in weed fallow, and 63% and 53% in 2002 in bahiagrass and rhizomal peanut, respectively. The percentage of endospore-filled females extracted from peanut roots grown in weed fallow plots increased from nondetectable in 1999 to 56% in 2002, whereas the percentages in bahiagrass and rhizomal peanut plots were 41% and 16%, respectively. Over 4 years, however, there was no strong evidence that endospores densities reached suppressive levels because peanut roots, pods, and pegs were heavily galled, and yields were suppressed. This might be attributed to the discovery of M. javanica infecting peanut in this field in early autumn 2001. A laboratory test confirmed that although the P. penetrans isolate specific to M. arenaria attached to M. javanica J2, no development occurred. In summary, P. penetrans increased on M. arenaria over a 4-year period, but apparently because of infection of M. javanica on peanut at the field site root-knot disease was not suppressed. This was confirmed by a suppressive soil test that showed a higher level of soil suppressiveness than occurred in the field (P

  13. Exserohilum rostratum: Characterization of a Cross-Kingdom Pathogen of Plants and Humans

    PubMed Central

    Sharma, Kalpana; Goss, Erica M.; Dickstein, Ellen R.; Smith, Matthew E.; Johnson, Judith A.; Southwick, Frederick S.; van Bruggen, Ariena H. C.

    2014-01-01

    Pathogen host shifts represent a major source of new infectious diseases. There are several examples of cross-genus host jumps that have caused catastrophic epidemics in animal and plant species worldwide. Cross-kingdom jumps are rare, and are often associated with nosocomial infections. Here we provide an example of human-mediated cross-kingdom jumping of Exserohilum rostratum isolated from a patient who had received a corticosteroid injection and died of fungal meningitis in a Florida hospital in 2012. The clinical isolate of E. rostratum was compared with two plant pathogenic isolates of E. rostratum and an isolate of the closely related genus Bipolaris in terms of morphology, phylogeny, and pathogenicity on one C3 grass, Gulf annual rye grass (Lolium multiflorum), and two C4 grasses, Japanese stilt grass (Microstegium vimineum) and bahia grass (Paspalum notatum). Colony growth and color, as well as conidia shape and size were the same for the clinical and plant isolates of E. rostratum, while these characteristics differed slightly for the Bipolaris sp. isolate. The plant pathogenic and clinical isolates of E. rostratum were indistinguishable based on morphology and ITS and 28S rDNA sequence analysis. The clinical isolate was as pathogenic to all grass species tested as the plant pathogenic strains that were originally isolated from plant hosts. The clinical isolate induced more severe symptoms on stilt grass than on rye grass, while this was the reverse for the plant isolates of E. rostratum. The phylogenetic similarity between the clinical and plant-associated E. rostratum isolates and the ability of the clinical isolate to infect plants suggests that a plant pathogenic strain of E. rostratum contaminated the corticosteroid injection fluid and was able to cause systemic disease in the affected patient. This is the first proof that a clinical isolate of E. rostratum is also an effective plant pathogen. PMID:25285444

  14. Comparison of soil bacterial communities under diverse agricultural land management and crop production practices.

    PubMed

    Wu, Tiehang; Chellemi, Dan O; Graham, Jim H; Martin, Kendall J; Rosskopf, Erin N

    2008-02-01

    The composition and structure of bacterial communities were examined in soil subjected to a range of diverse agricultural land management and crop production practices. Length heterogeneity polymerase chain reaction (LH-PCR) of bacterial DNA extracted from soil was used to generate amplicon profiles that were analyzed with univariate and multivariate statistical methods. Five land management programs were initiated in July 2000: conventional, organic, continuous removal of vegetation (disk fallow), undisturbed (weed fallow), and bahiagrass pasture (Paspalum notatum var Argentine). Similar levels in the diversity of bacterial 16S rDNA amplicons were detected in soil samples collected from organically and conventionally managed plots 3 and 4 years after initiation of land management programs, whereas significantly lower levels of diversity were observed in samples collected from bahiagrass pasture. Differences in diversity were attributed to effects on how the relative abundance of individual amplicons were distributed (evenness) and not on the total numbers of bacterial 16S rDNA amplicons detected (richness). Similar levels of diversity were detected among all land management programs in soil samples collected after successive years of tomato (Lycopersicon esculentum) cultivation. A different trend was observed after a multivariate examination of the similarities in genetic composition among soil bacterial communities. After 3 years of land management, similarities in genetic composition of soil bacterial communities were observed in plots where disturbance was minimized (bahiagrass and weed fallow). The genetic compositions in plots managed organically were similar to each other and distinct from bacterial communities in other land management programs. After successive years of tomato cultivation and damage from two major hurricanes, only the composition of soil bacterial communities within organically managed plots continued to maintain a high degree of similarity

  15. Short Communication An efficient method for simultaneous extraction of high-quality RNA and DNA from various plant tissues.

    PubMed

    Oliveira, R R; Viana, A J C; Reátegui, A C E; Vincentz, M G A

    2015-12-29

    Determination of gene expression is an important tool to study biological processes and relies on the quality of the extracted RNA. Changes in gene expression profiles may be directly related to mutations in regulatory DNA sequences or alterations in DNA cytosine methylation, which is an epigenetic mark. Correlation of gene expression with DNA sequence or epigenetic mark polymorphism is often desirable; for this, a robust protocol to isolate high-quality RNA and DNA simultaneously from the same sample is required. Although commercial kits and protocols are available, they are mainly optimized for animal tissues and, in general, restricted to RNA or DNA extraction, not both. In the present study, we describe an efficient and accessible method to extract both RNA and DNA simultaneously from the same sample of various plant tissues, using small amounts of starting material. The protocol was efficient in the extraction of high-quality nucleic acids from several Arabidopsis thaliana tissues (e.g., leaf, inflorescence stem, flower, fruit, cotyledon, seedlings, root, and embryo) and from other tissues of non-model plants, such as Avicennia schaueriana (Acanthaceae), Theobroma cacao (Malvaceae), Paspalum notatum (Poaceae), and Sorghum bicolor (Poaceae). The obtained nucleic acids were used as templates for downstream analyses, such as mRNA sequencing, quantitative real time-polymerase chain reaction, bisulfite treatment, and others; the results were comparable to those obtained with commercial kits. We believe that this protocol could be applied to a broad range of plant species, help avoid technical and sampling biases, and facilitate several RNA- and DNA-dependent analyses.

  16. Evapotranspiration parameterizations at a grass site in Florida, USA

    USGS Publications Warehouse

    Rizou, M.; Sumner, David M.; Nnadi, F.

    2007-01-01

    In spite of the fact that grasslands account for about 40% of the ice-free global terrestrial land cover, their contribution to the surface exchanges of energy and water in local and regional scale is so far uncertain. In this study, the sensitivity of evapotranspiration (ET) and other energy fluxes to wetness variables, namely the volumetric Soil Water Content (SWC) and Antecedent Precipitation Index (API), over a non-irrigated grass site in Central Florida, USA (28.049 N, 81.400 W) were investigated. Eddy correlation and soil water content measurements were taken by USGS (U.S. Geological Survey) at the grass study site, within 100 m of a SFWMD (South Florida Water Management District) weather station. The soil is composed of fine sands and it is mainly covered by Paspalum notatum (bahia grass). Variable soil wetness conditions with API bounds of about 2 to 160 mm and water table levels of 0.03 to 1.22 m below ground surface, respectively, were observed throughout the year 2004. The Bowen ratio exhibited an average of 1 and values larger than 2 during few dry days. The daytime average ET was classified into two stages, first stage (energy-limited) and second stage (water- limited) based on the water availability. The critical values of API and SWC were found to be about 56 mm and 0.17 respectively, with the second one being approximately 33% of the SWC at saturation. The ET values estimated by the simple Priestley-Taylor (PT) method were compared to the actual values. The PT coefficient varied from a low bound of approximately 0.4 to a peak of 1.21. Simple relationships for the PT empirical factor were employed in terms of SWC and API to improve the accuracy of the second stage observations. The results of the ET parameterizations closely match eddy-covariance flux values on daily and longer time steps.

  17. Transcriptome analysis of differentially expressed genes during embryo sac development in apomeiotic non-parthenogenetic interspecific hybrid of Pennisetum glaucum.

    PubMed

    Sahu, Pranav Pankaj; Gupta, Sarika; Malaviya, D R; Roy, Ajoy Kumar; Kaushal, Pankaj; Prasad, Manoj

    2012-07-01

    Apomixis results in the production of genetically uniform progeny, derived from the fertilization independent development (parthenogenesis) of an unreduced egg cell (apomeiosis). To identify genes involved in the apomeiosis, a comparative transcriptome analysis of differentially expressed genes during embryo sac (ES) development in a sexual Pennisetum glaucum (genotype 81A1) and its apomeiotic (aposporic) non-parthenogenetic interspecific hybrid (BC1GO) was investigated. BC1GO exhibited the partitioned apomeiosis component, whereby the second apomixis component viz., parthenogenesis was completely lacking. A total of 96 non-redundant transcripts were recovered using suppression subtractive hybridization and classified into 11 different categories according to their putative functions. Amongst the identified transcripts, many of them belonged to unknown function (40%) followed by those involved in protein metabolism, stress response, pollen/ovule/embryo development, and translation/protein modification process. A data search of transcriptional profiling in other apomictic species revealed that 75% of the differentially expressed transcripts have not been reported in previous studies. By macroarray analysis, we identified differential expression pattern of 96 transcripts, 45 (47%) of which showed ≥2-fold induction in apomeiotic BC1GO. Further, the obtained results were validated by quantitative real-time polymerase chain reaction to have a comparative expression profiling of eight selected up-regulated transcripts (≥2.5-fold) between BC1GO and 81A1 at different phases of ovule development. In silico mapping demonstrated that 13 transcripts were located onto rice chromosome 2, region syntenic with the apospory locus as reported in Brachiaria brizantha and Paspalum notatum. The expression patterns of these transcripts showed a significant difference at differentiating megaspore mother cell and gametogenesis stages thereby suggesting their involvement in floral

  18. Ecological rehabilitation and phytoremediation with four grasses in oil shale mined land.

    PubMed

    Xia, H P

    2004-01-01

    Vetiver grass (Vetiveria zizanioides), bahia grass (Paspalum notatum), St. Augustine grass (Stenotaphrum secundatum), and bana grass (Pennisetum glaucumxP. purpureum) were selected to rehabilitate the degraded ecosystem of an oil shale mined land of Maoming Petro-Chemical Company located in Southwest of Guangdong Province, China. Among them, vetiver had the highest survival rate, up to 99%, followed by bahia and St. Augustine, 96% and 91%, respectively, whereas bana had the lowest survival rate of 62%. The coverage and biomass of vetiver were also the highest after 6-month planting. Fertilizer application significantly increased biomass and tiller number of the four grasses, of which St. Augustine was promoted most, up to 70% for biomass, while vetiver was promoted least, only 27% for biomass. Two heavy metals, lead (Pb) and cadmium (Cd) tested in this trial had different concentrations in the oil shale residue, and also had different contents and distributions in the four grass species. Concentrations of Pb and Cd in the four grasses presented a disparity of only 1.6-3.8 times, but their uptake amounts to the two metals were apart up to 27.5-35.5 times, which was chiefly due to the significantly different biomasses among them. Fertilizer application could abate the ability of the four species to accumulate heavy metals, namely concentration of heavy metals in plants decreased as fertilizer was applied. The total amount of metals accumulated by each plant under the condition of fertilization did not decrease due to an increase of biomass. In summary, vetiver may be the best species used for vegetation rehabilitation in oil shale disposal piles.

  19. Predictive modeling of hazardous waste landfill total above-ground biomass using passive optical and LIDAR remotely sensed data

    NASA Astrophysics Data System (ADS)

    Hadley, Brian Christopher

    This dissertation assessed remotely sensed data and geospatial modeling technique(s) to map the spatial distribution of total above-ground biomass present on the surface of the Savannah River National Laboratory's (SRNL) Mixed Waste Management Facility (MWMF) hazardous waste landfill. Ordinary least squares (OLS) regression, regression kriging, and tree-structured regression were employed to model the empirical relationship between in-situ measured Bahia (Paspalum notatum Flugge) and Centipede [Eremochloa ophiuroides (Munro) Hack.] grass biomass against an assortment of explanatory variables extracted from fine spatial resolution passive optical and LIDAR remotely sensed data. Explanatory variables included: (1) discrete channels of visible, near-infrared (NIR), and short-wave infrared (SWIR) reflectance, (2) spectral vegetation indices (SVI), (3) spectral mixture analysis (SMA) modeled fractions, (4) narrow-band derivative-based vegetation indices, and (5) LIDAR derived topographic variables (i.e. elevation, slope, and aspect). Results showed that a linear combination of the first- (1DZ_DGVI), second- (2DZ_DGVI), and third-derivative of green vegetation indices (3DZ_DGVI) calculated from hyperspectral data recorded over the 400--960 nm wavelengths of the electromagnetic spectrum explained the largest percentage of statistical variation (R2 = 0.5184) in the total above-ground biomass measurements. In general, the topographic variables did not correlate well with the MWMF biomass data, accounting for less than five percent of the statistical variation. It was concluded that tree-structured regression represented the optimum geospatial modeling technique due to a combination of model performance and efficiency/flexibility factors.

  20. Grass pollen allergens globally: the contribution of subtropical grasses to burden of allergic respiratory diseases.

    PubMed

    Davies, J M

    2014-06-01

    Grass pollens of the temperate (Pooideae) subfamily and subtropical subfamilies of grasses are major aeroallergen sources worldwide. The subtropical Chloridoideae (e.g. Cynodon dactylon; Bermuda grass) and Panicoideae (e.g. Paspalum notatum; Bahia grass) species are abundant in parts of Africa, India, Asia, Australia and the Americas, where a large and increasing proportion of the world's population abide. These grasses are phylogenetically and ecologically distinct from temperate grasses. With the advent of global warming, it is conceivable that the geographic distribution of subtropical grasses and the contribution of their pollen to the burden of allergic rhinitis and asthma will increase. This review aims to provide a comprehensive synthesis of the current global knowledge of (i) regional variation in allergic sensitivity to subtropical grass pollens, (ii) molecular allergenic components of subtropical grass pollens and (iii) allergic responses to subtropical grass pollen allergens in relevant populations. Patients from subtropical regions of the world show higher allergic sensitivity to grass pollens of Chloridoideae and Panicoideae grasses, than to temperate grass pollens. The group 1 allergens are amongst the allergen components of subtropical grass pollens, but the group 5 allergens, by which temperate grass pollen extracts are standardized for allergen content, appear to be absent from both subfamilies of subtropical grasses. Whilst there are shared allergenic components and antigenic determinants, there are additional clinically relevant subfamily-specific differences, at T- and B-cell levels, between pollen allergens of subtropical and temperate grasses. Differential immune recognition of subtropical grass pollens is likely to impact upon the efficacy of allergen immunotherapy of patients who are primarily sensitized to subtropical grass pollens. The literature reviewed herein highlights the clinical need to standardize allergen preparations for both

  1. Controlled application rate of water treatment residual for agronomic and environmental benefits.

    PubMed

    Oladeji, Olawale O; O'Connor, George A; Sartain, Jerry B; Nair, Vimala D

    2007-01-01

    Water treatment residuals (WTR) are useful soil amendments to control excessive soluble phosphorus (P) in soils, but indiscriminate additions can result in inadequate control or excessive immobilization of soluble P, leading to crop deficiencies. We evaluated the influence of application rates of an Al-WTR and various P-sources on plant yields, tissue P concentrations, and P uptake and attempted to identify a basis for determining WTR application rates. Bahiagrass (paspalum notatum Fluggae) was grown in a P-deficient soil amended with four P-sources at two application levels (N- and P-based rates) and three WTR rates (0, 10, and 25 g kg(-1) oven dry basis) in a glasshouse pot experiment. The glasshouse results were compared with data from a 2-yr field experiment with similar treatments that were surface applied to an established bahiagrass. Soil P storage capacity (SPSC) values increased with application rate of WTR, and the increase varied with sources of P applied. Soil soluble P concentrations increased as SPSC was reduced, and a change point was identified at 0 mg kg(-1) SPSC in the glasshouse and the field studies. A change point was identified in the bahiagrass yields at a tissue P concentration of 2.0 g kg(-1), corresponding to zero SPSC. Zero SPSC was shown to be an agronomic threshold above which yields and P concentrations of plants declined and below which there is little or no yield response to increased plant P concentrations. Applying P-sources at N-based rates, along with WTR sufficient to give SPSC value of 0 mg kg(-1) SPSC, enhanced the environmental benefits (reduced P loss potential) without negative agronomic impacts.

  2. Environmental Impact Research Program and Defense Natural Resources Program. Northern Bobwhite (Colinus virginianus). Section 4.1.3, US Army Corps of Engineers Wildlife Resources Management Manual.

    DTIC Science & Technology

    1992-04-01

    Honeysuckles Sassafras Smartweeds Vetches Crab grass Paspalums Ash Poor Joe Bull grass Grapes Spurred butterfly pea Doveweeds Foxtail grasses Cranesbill...millets (Panicum spp.), and pas- I): .lUs ( Paspalum spp.) are important grasses . Doveweeds (Croton spp.) and ragweeds (Ambrosia spp.) are often...Bristlegrass (Setaria spp.) Browntop millet (Panicum fascicula turn) Bull grass ( Paspalum boscianun) Bush clovers (Lespedeza spp.) Common persimmon

  3. Intake, digestibility, and nitrogen retention by sheep supplemented with warm-season legume haylages or soybean meal.

    PubMed

    Foster, J L; Adesogan, A T; Carter, J N; Blount, A R; Myer, R O; Phatak, S C

    2009-09-01

    The high cost of commercial supplements necessitates evaluation of alternatives for ruminant livestock fed poor quality warm-season grasses. This study determined how supplementing bahiagrass haylage (Paspalum notatum Flügge cv. Tifton 9) with soybean [Glycine max (L.) Merr.] meal or warm-season legume haylages affected the performance of lambs. Forty-two Dorper x Katadhin lambs (27.5 +/- 5 kg) were fed for ad libitum intake of bahiagrass haylage (67.8% NDF, 9.6% CP) alone (control) or supplemented with soybean meal (18.8% NDF, 51.4% CP) or haylages of annual peanut [Arachis hypogaea (L.) cv. Florida MDR98; 39.6% NDF, 18.7% CP], cowpea [Vigna unguiculata (L.) Walp. cv. Iron clay; 44.1% NDF, 16.0% CP], perennial peanut (Arachis glabrata Benth. cv. Florigraze; 40.0% NDF, 15.8% CP), or pigeonpea [Cajanus cajan (L.) Millsp. cv. GA-2; 65.0% NDF, 13.7% CP]. Haylages were harvested at the optimal maturity for maximizing yield and nutritive value, wilted to 45% DM, baled, wrapped in polyethylene plastic, and ensiled for 180 d. Legumes were fed at 50% of the dietary DM, and soybean meal was fed at 8% of the dietary DM to match the average CP concentration (12.8%) of legume haylage-supplemented diets. Lambs were fed each diet for a 14-d adaptation period and a 7-d data collection period. Each diet was fed to 7 lambs in period 1 and 4 lambs in period 2. Pigeonpea haylage supplementation decreased (P < 0.01) DM and OM intake and digestibility vs. controls. Other legume haylages increased (P < 0.05) DM and OM intake vs. controls; however, only soybean meal supplementation increased (P = 0.01) DM digestibility. All supplements decreased (P = 0.05) NDF digestibility. Except for pigeonpea haylage, all supplements increased (P < 0.01) N intake, digestibility, and retention, and the responses were greatest (P = 0.04) with soybean meal supplementation. Microbial N synthesis was reduced (P = 0.02) by pigeonpea haylage supplementation, but unaffected (P = 0.05) by other supplements

  4. Intake, digestibility, and nitrogen retention by sheep supplemented with warm-season legume hays or soybean meal.

    PubMed

    Foster, J L; Adesogan, A T; Carter, J N; Blount, A R; Myer, R O; Phatak, S C

    2009-09-01

    The increasing cost of feed supplements necessitates evaluation of alternatives for ruminant livestock grazing poor quality warm-season grasses. This study determined how supplementing bahiagrass hay (Paspalum notatum Flügge cv. Pensacola) with soybean [Glycine max (L.) Merr.] meal or warm-season legume hays affected intake, digestibility, and N utilization by lambs. Dorper x Katadhin crossbred lambs (30.6 +/- 5.5 kg; n = 42) were fed bahiagrass hay (73.8% NDF, 8.1% CP) for ad libitum intake and supplemented with nothing (control), soybean meal, or hays of annual peanut [Arachis hypogaea (L.) cv. Florida MDR98; 46.2% NDF, 14.7% CP], cowpea [Vigna unguiculata (L.) Walp. cv. Iron clay; 62.2% NDF, 11.7% CP], perennial peanut (Arachis glabrata Benth. cv. Florigraze; 43.3% NDF, 15.2% CP), pigeonpea [Cajanus cajan (L.) Millsp. cv. GA-2; 78.6% NDF, 12.2% CP], or soybean (cv. Pioneer 97B52; 59.0% NDF, 13.5% CP). Legume hays were supplemented at 50% of total diet DM, and soybean meal was supplemented at a level (4.25% of diet DM) that matched the average dietary CP content (10.8%) of the legume hay-supplemented diets. The cowpea, pigeonpea, and soybean were harvested at respective maturities that maximized DM yield and nutritive value, and the peanuts were first cuttings. Diets were fed to 6 lambs per treatment for 2 consecutive 21-d periods. Supplementation with hays of annual and perennial peanut, cowpea, and soybean increased (P < 0.01) DMI vs. control, but apparent DM digestibility was only increased (P = 0.03) by supplementation with annual or perennial peanut hay. Compared with the control, N intake, digestibility, and retention were increased (P < 0.01) by supplementation with legume hay or soybean meal. Responses were greatest when annual or perennial peanut hays were fed. Ruminal ammonia concentration was increased (P < 0.01) by all legume hay supplements vs. the control. Microbial N synthesis and ruminally degraded OM were increased (P = 0.03) by perennial and

  5. Diet selection by steers using microhistological and stable carbon isotope ratio analyses.

    PubMed

    Bennett, L L; Hammond, A C; Williams, M J; Chase, C C; Kunkle, W E

    1999-08-01

    Two methods of determining diet botanical composition, microhistological (MH), and stable carbon isotope ratio (CR) analyses were used to determine botanical composition of ingesta and fecal grab samples in steers grazing rhizoma peanut-mixed tropical grass pastures. Three pastures were used over two grazing seasons, 1992 and 1993, in Brooksville, FL. A weighted-disc double-sampling technique was used to determine forage mass and botanical composition, percentage of rhizoma peanut (Arachis glabrata), grass (Paspalum notatum and Cynodon dactlyon), and forb (primarily Chenopodium ambrosioides) on offer every 28 d throughout the grazing seasons. There was an effect of sampling date (P<.001), sampling date x pasture (P<.001), and sampling date x year (P<.001) on forage mass on offer. There was a pasture x year x sampling date interaction (P<.001) for all botanical components. In 1992 and 1993, using cannulated steers sampled every 56 d, there were interactions with year for rhizoma peanut and forb (P<.05), but not for grass with MH analysis (components: rhizoma peanut, grass, and forb). Ingesta and fecal rhizoma peanut (r = .73 and .92 for 1992 and 1993, respectively) and ingesta and fecal forb (r = .86 and .98 for 1992 and 1993, respectively) were positively correlated (P<.001). Ingesta and fecal grass were positively correlated (r = .52, P<.001), but the correlation was not as high. With the CR analysis (components: Calvin cycle [C3] plants and C4-dicarboxylic acid pathway [C4] plants), ingesta and corrected fecal (corrected for in vitro organic matter digestibility [IVOMD]) C3 plants were positively correlated (r = .62; P<.001). Diet composition of fecal grab samples from noncannulated steers, collected on the same sampling schedule as for hand-clipped pasture samples, differed at times due to the complexity of the sward (both rhizoma peanut and forb constituted a single component, C3, in the CR analysis). Based on these results, if there is a substantial

  6. Effect of ammonium sulfate fertilization on bahiagrass quality and copper metabolism in grazing beef cattle.

    PubMed

    Arthington, J D; Rechcigl, J E; Yost, G P; McDowell, L R; Fanning, M D

    2002-10-01

    To assess the impact of S fertilization on bahiagrass (Paspalum notatum) quality and Cu metabolism in cattle, two studies were conducted during the summer grazing season (1999 and 2000). Pasture replicates (16.2 ha; n = 2/treatment) received the same fertilizer treatment in each growing season, consisting of 1) 67 kg N/ha from ammonium sulfate (AS), 2) 67 kg N/ha from ammonium nitrate (AN), and 3) control (no fertilizer; C). Forage sampling was conducted at 28-d intervals following fertilization by the collection of whole plants (four samples/pasture) in randomly distributed 1-m2 grazing exclusion cages and analyzed for CP, in vitro organic matter digestibility, S, P, Ca, K, Mg, Na, Fe, Al, Mn, Cu, and Zn. To determine the effect of fertilizer treatment on liver trace mineral concentrations in grazing cattle, random liver tissue samples were collected (n = 12; four/treatment) at the start and end of the study period in 2000. Ammonium sulfate fertilization increased (P < 0.001) forage S concentration in both years. Plant tissue N concentrations were increased by N fertilization, regardless of source, in 2000, but not in 1999. Cows grazing AS pastures had lower (P < 0.05) liver Cu concentrations at the end of the study period in 2000 compared to AN and C. In Exp. 2, 37 Cu-deficient heifers grazing AS fertilized pastures were obtained from the same location and allocated to one of two treatments, consisting of supplements providing 123 mg/d of either inorganic (Cu sulfate; n = 12) or organic (Availa-Cu; n = 15) Cu. Treatments were delivered for 83 d. Liver Cu increased over time in all heifers regardless of treatment; however, heifers supplemented with Availa-Cu tended (P = 0.09) to have higher mean liver Cu concentrations than those receiving Cu sulfate. The results of these studies indicate that AS fertilization of bahiagrass increases forage S concentrations. When provided free-choice access to a complete salt-based trace mineral supplement, cows grazing AS

  7. Source and level of energy supplementation for yearling cattle fed ammoniated hay.

    PubMed

    Royes, J B; Brown, W F; Martin, F G; Bates, D B

    2001-05-01

    Brahman x British crossbred steers were used in growth and digestion trials to evaluate the response of source (corn, sugar cane molasses, or soybean hulls) and feeding rate (0, 1.4, or 2.8 kg DM per steer daily in the growth trials; 0, 15, or 30% of the ration DM in the digestion trial) of energy supplementation in cattle fed ammoniated (4% of forage DM) stargrass (Cynodon nlemfuensis Vanderyst var. nlemfuensis) hay. Cattle on all treatments were fed 0.5 kg cottonseed meal daily. In the growth trials, steers grazed dormant bahiagrass (Paspalum notatum) pasture. Increasing the levels of supplementation decreased hay intake but increased total dietary intake for all diets (P < 0.07). Daily gain and feed efficiency of steers were improved (P < 0.03) with supplementation. Steers supplemented with corn or soybean hulls at 2.8 kg DM/d had a higher ADG (0.92 kg) and gain/feed (0.103) than steers supplemented with molasses (0.78 kg, 0.08, respectively) at the same level. Seven crossbred steers (200 kg) were used in a five-period digestion trial to evaluate apparent OM, NDF, ADF, and hemicellulose digestibility. Apparent OM digestibility of all diets increased linearly (P = 0.02) as the level of supplementation increased. Apparent NDF and ADF digestibility decreased (P < 0.03) as the level of supplementation with corn or molasses increased, whereas increasing the level of soybean hulls in the diet increased (P < 0.06) apparent NDF and ADF digestibility. Four ruminally fistulated crossbred steers (472 kg) were used in a 4 x 4 latin square design to investigate ruminal characteristics with energy supplementation at 30% of ration DM. Ruminal pH in steers supplemented with soybean hulls or corn declined after feeding. Ruminal pH decreased more rapidly with corn supplementation and remained below 6.2 for a longer period of time than with the other diets. Ruminal pH did not change within 24 h after feeding for steers fed the control or molasses diets. No change in total VFA

  8. Biological impact of divergent land management practices on tomato crop health.

    PubMed

    Chellemi, Dan O; Wu, Tiehang; Graham, Jim H; Church, Greg

    2012-06-01

    Development of sustainable food systems is contingent upon the adoption of land management practices that can mitigate damage from soilborne pests. Five diverse land management practices were studied for their impacts on Fusarium wilt (Fusarium oxysporum f. sp. lycopersici), galling of roots by Meloidogyne spp. and marketable yield of tomato (Solanum lycopersicum) and to identify associations between the severity of pest damage and the corresponding soil microbial community structure. The incidence of Fusarium wilt was >14% when tomato was cultivated following 3 to 4 years of an undisturbed weed fallow or continuous tillage disk fallow rotation and was >4% after 3 to 4 years of bahiagrass (Paspalum notatum) rotation or organic production practices that included soil amendments and cover crops. The incidence of Fusarium wilt under conventional tomato production with soil fumigation varied from 2% in 2003 to 15% in 2004. Repeated tomato cultivation increased Fusarium wilt by 20% or more except when tomato was grown using organic practices, where disease remained less than 3%. The percent of tomato roots with galls from Meloidogyne spp. ranged from 18 to 82% in soil previously subjected to a weed fallow rotation and 7 to 15% in soil managed previously as a bahiagrass pasture. Repeated tomato cultivation increased the severity of root galling in plots previously subjected to a conventional or disk fallow rotation but not in plots managed using organic practices, where the percentage of tomato roots with galls remained below 1%. Marketable yield of tomato exceeded 35 Mg ha(-1) following all land management strategies except the strip-tillage/bahiagrass program. Marketable yield declined by 11, 14, and 19% when tomato was grown in consecutive years following a bahiagrass, weed fallow, and disk rotation. The composition of fungal internal transcribed spacer 1 (ITS1) and bacterial 16S rDNA amplicons isolated from soil fungal and bacterial communities corresponded with

  9. Effect of copper source and level on performance and copper status of cattle consuming molasses-based supplements.

    PubMed

    Arthington, J D; Pate, F M; Spears, J W

    2003-06-01

    Two studies were conducted to evaluate the availability of dietary Cu offered to growing beef cattle consuming molasses-based supplements. In Exp. 1, 24 Braford heifers were assigned randomly to bahiagrass (Paspalum notatum) pastures (two heifers/pasture). Heifers were provided 1.5 kg of TDN and 0.3 kg of supplemental CP/heifer daily using a molasses-cottonseed meal slurry. Three treatments were randomly assigned to pastures (four pastures/treatment), providing 100 mg of supplemental Cu daily in the form of either CuSO4 (inorganic Cu) or organic-Cu. A third treatment offered no supplemental Cu (negative control). Heifer BW was collected at the start and end of the study. Jugular blood and liver samples were collected on d 0, 29, 56, and 84. In Exp. 2, 24 Brahman-crossbred steers were fed the same molasses-cottonseed meal supplement at the same rates used in Exp. 1. Steers were housed in individual pens (15 m2) with free-choice access to stargrass (Cynodon spp.) hay. Four Cu treatments were assigned to individual steers (six pens/treatment) providing 1) 10 ppm of Cu from an organic source; 2) 10 ppm Cu from Tri-basic Cu chloride (TBCC); 3) 30 ppm of Cu from TBCC; or 4) 30 ppm of Cu, a 50:50 ratio of TBCC and organic Cu. Body weights and jugular blood and liver samples were collected on d 0, 24, 48, and 72. In Exp. 1, liver Cu concentrations did not differ between heifers supplemented with inorganic and organic Cu. Each source resulted in increased (P < 0.05) liver Cu concentrations compared with the unsupplemented control. Plasma ceruloplasmin concentrations were higher (P < 0.05) for Cu-supplemented heifers, independent of Cu source. Heifer ADG tended (P = 0.11) to increase with Cu supplementation compared with the unsupplemented control. In Exp. 2, liver Cu was greater (P < 0.05) on d 24, 48, and 72 for steers consuming 30 vs. 10 ppm of Cu. Steers supplemented with organic Cu had lower DMI than steers supplemented with 10 or 30 ppm of TBCC. These data suggest that

  10. Development of Volatile Oil of Mustard and Vanillin as an Effective Food Preservation System for Military Bread and Baked Goods

    DTIC Science & Technology

    2006-10-01

    Aspergillus niger and Penicillium notatum in the model system. 5 3. The growth or no growth of Aspergillus niger in the model system in the...antimicrobial properties of VOM and vanillin were evaluated alone against four organisms associated with bread. The organisms selected were Penicillium ...organisms were studied: Penicillium notatum, Rhizopus stolonifer, Aspergillus niger and Saccharomycopsis fibuligera. The determination of

  11. Evaluation of Plant Growth Regulators for Use in Grounds Maintenance at Military Installations

    DTIC Science & Technology

    1992-07-01

    dominant grass , bahiagrass ( Paspalum notatun) which comprised 95-98 percent of the area (visual estimate) and a variety of broadleaf and grassy weed species...gamagrass (Tripsacum dactyloides L.); vasey grass ( Paspalum urvillei); and milkweed (Asclepias spp.). Other weed species present were infrequent, low-growing...following weed species: Eastern gamagrass (Tripsacum dactyloides L.), milkweed (Asclepias spp.), and vasey grass ( Paspalum urvillei). e. None of the

  12. Effect of Boundary Conditions on the Axial Compression Buckling of Homogeneous Orthotropic Composite Cylinders in the Long Column Range

    NASA Technical Reports Server (NTRS)

    Mikulas, Martin M., Jr.; Nemeth, Michael P.; Oremont, Leonard; Jegley, Dawn C.

    2011-01-01

    Buckling loads for long isotropic and laminated cylinders are calculated based on Euler, Fluegge and Donnell's equations. Results from these methods are presented using simple parameters useful for fundamental design work. Buckling loads for two types of simply supported boundary conditions are calculated using finite element methods for comparison to select cases of the closed form solution. Results indicate that relying on Donnell theory can result in an over-prediction of buckling loads by as much as 40% in isotropic materials.

  13. Terrebonne Parish-Wide Forced Drainage System, Terrebonne Parish, Louisiana.

    DTIC Science & Technology

    1983-08-01

    marshes include: Acnida cuspidata, Bacopa monnieri, Leptochloa facicularis, Paspalum vaginatum and Pluchea camphorata. P~imary productivity of intermediate...intermediate marshes of Terrebonne Parish include: Acnida cuspidata, Bacopa monnieri, Leptochloa fascicularis, Paspalum vaginatum and Pluchea camphorata...intermediate marsh as it does the brackish type, but to a lesser degree. Other common plants are Phragmites communis, Sagittaria falcata, and Bacopa

  14. Identifying Military Impacts on Archaeological Deposits Based on Differences in Soil Organic Carbon and Chemical Elements at Soil Horizon Interfaces

    DTIC Science & Technology

    2012-03-01

    Paspalum spp), Japanese brome ( Bromus arvensis), panicgrass (Panicum spp), ragweed (Ambrosia artemisifolia), lespedeza (Lespedeza spp), and oak and pine...little bluestem (Schizachyrium scoparium) with a small component of smooth brome ( Bromus inermis) and goldenrod (Solidago spp). Following transect...immature pine trees with an understory dominated by broomsedge, McCartney rose (Rosa bracteata), partridge pea (Chamaecrista spp), paspalum

  15. Bioenergy Crop Breeding and Production Research in the Southeast, Final Report for 1996 to 2001

    SciTech Connect

    Bouton, J.H.

    2003-05-30

    Switchgrass (Panicum virgatum L.) is a native grass species to much of the US. It has shown great potential for use in production of fuel ethanol from cellulosic biomass (Lynd et al., 1991). Work in Alabama demonstrated very high dry matter yields can be achieved with switchgrass (Maposse et al. 1995) in the southeastern US. Therefore, this region is thought to be an excellent choice for development of a switchgrass cropping system where farmers can produce the grass for either biomass or forage. Another report has shown success with selection and breeding to develop high yielding germplasm from adapted cultivars and ecotypes of switchgrass (Moser and Vogel 1995). In the mid 1990s, however, there was little plant breeding effort for switchgrass with a potential for developing a cultivar for the southeast region. The main goal of the project was to develop adaptive, high-yielding switchgrass cultivars for use in cropping systems for bioenergy production in the southeastern US. A secondary objective was to assess the potential of alternate herbaceous species such as bermudagrass (Cynodon dactylon L.), bahiagrass (Paspalum notatum Flugge.), and napiergrass (Pennisetum purpureum Schumach.) that may compete with switchgrass for herbaceous bioenergy production in the southeast. During the conduct of the project, another goal of developing molecular markers useful for genetic mapping was added. The ''lowland'' cultivars, Alamo and Kanlow, were found to be the highest yielding switchgrass cultivars. Although most summers during the project period were hot and dry, their annual dry matter yield continue to outperform the best ''upland'' cultivars such as Cave-in-Rock, Shawnee, NE Late, and Trailblazer. The use of a breeding procedure based on the ''honeycomb design'' and multi-location progeny testing, coupled with the solid heritability and genetic gain estimates for dry matter yield in lowland type switchgrass germplasm, indicated excellent potential to isolate parental

  16. Development of a Fluvial Egg Drift Simulator to evaluate the transport and dispersion of Asian carp eggs in rivers

    USGS Publications Warehouse

    Garcia, Tatiana; Jackson, P. Ryan; Murphy, Elizabeth A.; Valocchi, Albert J.; Garcia, Marcelo H.

    2013-01-01

    Asian carp are migrating towards the Great Lakes and are threatening to invade this ecosystem, hence there is an immediate need to control their population. The transport of Asian carp eggs in potential spawning rivers is an important factor in its life history and recruitment success. An understanding of the transport, development, and fate of Asian carp eggs has the potential to create prevention, management, and control strategies before the eggs hatch and develop the ability to swim. However, there is not a clear understanding of the hydrodynamic conditions at which the eggs are transported and kept in suspension. This knowledge is imperative because of the current assumption that suspension is required for the eggs to survive. Herein, FluEgg (Fluvial Egg Drift Simulator), a three-dimensional Lagrangian model capable of evaluating the influence of flow velocity, shear dispersion and turbulent diffusion on the transport and dispersal patterns of Asian carp eggs is presented. The model's variables include not only biological behavior (growth rate, density changes) but also the physical characteristics of the flow field, such as mean velocities and eddy diffusivities. The performance of the FluEgg model was evaluated using observed data from published flume experiments conducted in China with water-hardened Asian carp eggs as subjects. FluEgg simulations show a good agreement with the experimental data. The model was also run with observed data from the Sandusky River in Ohio to provide a real-world demonstration case. This research will support the identification of critical hydrodynamic conditions (e.g., flow velocity, depth, and shear velocity) to maintain eggs in suspension, assist in the evaluation of suitable spawning rivers for Asian carp populations and facilitate the development of prevention, control and management strategies for Asian carp species in rivers and water bodies.

  17. Terrestrial Biological Inventory, Hillview Drainage and Levee District, Greene and Scott Counties, Illinois.

    DTIC Science & Technology

    1982-01-01

    Illinois: Grasses - Bromus to Paspalum . Southern Ill. Univ. Press, Carbondale, Ill. 332 pp. Mohleubrock, R.K. 1973. The Illustrated Flora of Illinois: Grasses ... Grass ) Paspalum ciliatifolium Hichx. (Hairy Lens Grass ) Phalaris arundinacea L. (Reed Canary Grass ) Poa annua L. (Mnus1 Blue Grass ) Poa Pratensis L...broad bottom- lands of this section. On the mesic prairie Andropogon gerardii Vitman. (Big Bluestem), Sorghastrum nutans (L.) Nash. (Indian Grass

  18. Vegetation Evaluation and Recommendations: Dredge Material Placement Areas and Adjacent Lands, Kaskaskia River Navigation Project, New Athens to Fayetteville.

    DTIC Science & Technology

    1981-06-03

    288 pp. Mohlenbrock, R. H. 1972. The illustrated flora of Illinois: Grasses : Bromus to Paspalum . Southern Illinois University Press, Carbondale...in less satur- ated areas are Desmodium paniculatum (panicled tick trefoil), Geum canadense (white avens), Paspalum fluitans (swamp bead grass ...tall fescue), Bromus inermis (smooth brome), and Tridens flavus (purple-top) are the most abundant and important grasses in the old fields. Major

  19. Evaluation of turfgrass species and cultivars for potential resistance to twolined spittlebug (Hemiptera: Cercopidae).

    PubMed

    Shortman, S L; Braman, S K; Duncan, R R; Hanna, W W; Engelke, M C

    2002-04-01

    Potential resistance to the twolined spittlebug, Prosapia bicincta (Say), was evaluated among 56 turfgrass genotypes. Greenhouse, laboratory, and field bioassays identified differences in spittlebug survival and development, host preference and damage levels, and turfgrass tolerance to and ability to recover from pest induced injury. All centipede grasses demonstrated high levels of susceptibility, followed by bermudagrasses, seashore paspalums, and zoysiagrasses. Average nymphal survival to the adult stage ranged from 1.5 to 78.1%. Development required 38.1-62.0 d under greenhouse conditions, depending on plant taxa. Among seashore paspalums, nymphal survival to the adult stage was lowest and duration of development was longest on HI-1, 'Sea Isle 2000', 561-79, and 'Mauna Kea'. Reduced spittlebug survival and increased developmental times were also observed on the bermudagrasses BERPC 91-15 and 'Tifway'. Although zoysiagrasses supported spittlebug development and survival to the adult stage, developmental times were extended on the zoysiagrass cultivars 'Emerald' and 'El Toro'. Spittlebug preference varied with generation evaluated. First-generation spittlebugs inflicted the greatest damage on TC201 (centipede grass), 'Primavera' (bermudagrass), and 'Emerald' (zoysiagrass) in choice tests. In the fall, second-generation spittlebugs damaged TC201 (centipedegrass) and 'Sea Isle 1' (paspalum) most severely, whereas 561-79 (paspalum) and 'Emerald'(zoysiagrass) were less severely affected. Among taxa included in field trials, HI-1, 'Mauna Kea', 'Sea Isle 2000',and AP-14 paspalums, 'Tifway' bermudagrass, and 'Emerald' zoysiagrass were most tolerant (demonstrated the best regrowth potential following twolined spittlebug feeding).

  20. Seed deterioration in flooded agricultural fields during winter

    USGS Publications Warehouse

    Nelms, C.O.; Twedt, D.J.

    1996-01-01

    We determined rate of seed deterioration for 3 crops (corn, rice, and soybean) and 8 weeds commonly found in agricultural fields and moist-soil management units in the Mississippi Alluvial Valley (MAV). The weeds were broadleaf signalgrass (Brachiaria platyphylla), junglerice barnyardgrass (Echinochloa colonum), morningglory (Ipomoea sp.), panic grass (Panicum sp.), bull paspalum (Paspalum boscianum), red rice (Oryza sativa), hemp sesbania (Sesbania exaltata), and bristlegrass (Setaria sp.). Weed seeds, except morningglory, deteriorated slower than corn and soybean, whereas rice decomposed slower than all weed seeds except red rice and bull paspalum. For land managers desiring to provide plant food for wintering waterfowl, rice is clearly the most persistent small grain crop in the MAV. Persistence of weed seeds under flooded conditions throughout winter makes them a cost-effective alternative to traditional crops on land managed for waterfowl.

  1. Soil-extractable phosphorus and phosphorus saturation threshold in beef cattle pastures as affected by grazing management and forage type.

    PubMed

    Sigua, Gilbert C; Chase, Chad C; Albano, Joseph

    2014-02-01

    Grazing can accelerate and alter the timing of nutrient transfer, and could increase the amount of extractable phosphorus (P) cycle from soils to plants. The effects of grazing management and/or forage type that control P cycling and distribution in pasture's resources have not been sufficiently evaluated. Our ability to estimate the levels and changes of soil-extractable P and other crop nutrients in subtropical beef cattle pastures has the potential to improve our understanding of P dynamics and nutrient cycling at the landscape level. To date, very little attention has been paid to evaluating transfers of extractable P in pasture with varying grazing management and different forage type. Whether or not P losses from grazed pastures are significantly greater than background losses and how these losses are affected by soil, forage management, or stocking density are not well understood. The objective of this study was to evaluate the effect of grazing management (rotational versus "zero" grazing) and forage types (FT; bahiagrass, Paspalum notatum, Flugge versus rhizoma peanuts, Arachis glabrata, Benth) on the levels of extractable soil P and degree of P saturation in beef cattle pastures. This study (2004-2007) was conducted at the Subtropical Agricultural Research Station, US Department of Agriculture-Agricultural Research Service located 7 miles north of Brooksville, FL. Soil (Candler fine sand) at this location was described as well-drained hyperthermic uncoated Typic Quartzipsamments. A split plot arrangement in a completely randomized block design was used and each treatment was replicated four times. The main plot was represented by grazing management (grazing vs. no grazing) while forage types (bahiagrass vs. perennial peanut) as the sub-plot treatment. Eight steel exclosures (10 × 10 m) were used in the study. Four exclosures were placed and established in four pastures with bahiagrass and four exclosures were established in four pastures with rhizoma

  2. Digestive utilization of ozone-exposed forage by rabbits (Oryctolagus cuniculus)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    A mixture of common Southern Piedmont (USA) grassland species (Lolium arundinacea, Paspalum dilatatum, Cynodon dactylon and Trifolium repens) was exposed to ozone [ambient (non-filtered; NF) and twice-ambient (2X) concentrations] and fed to individually caged New Zealand white rabbits (Oryctolagus c...

  3. Actions to Abate Critical Threats, Such as Encroachment and Invasive Species, Using GIS and Conservation Area Planning Across the Gulf Coastal Plain Ecosystem Partnership (GCPEP) Landscape, Phase 1

    DTIC Science & Technology

    2006-12-22

    2 Japanese Honeysuckle (Lonicera japonica) 2 Lantana (Lantana camara) 2 Vasey Grass (Paspalum urvillei) 1 Pampas Grass 1 Camphor Tree...Urban interface Main base 10+ Yes Treat 10. Camphor Road edges 1+ Yes Treat 29 PARTNER INVASIVE ASSESSMENT REPLIES Agency/Organization: __DOD

  4. Lower Mississippi River Environmental Program. Report 15. Vegetation Development on Revetments Along the Lower Mississippi River

    DTIC Science & Technology

    1988-06-01

    guinguefolia Ulmus rubra Physalis pubescens Unknown f orb Portulacca oleracea Sida spinosa Smilax bona-nox Smilax sp. Sporobolus sp. Teucrium canadense Unknown...Paspajlum fluitans Paspalum Phyla incisa Phyla Physalis pubescens Groundche: ,. Platanus occidentalis Sycamore Pluchea camporata Marsh fleaba Populus

  5. Proposed Land Conveyance for Construction of Three Facilities at March Air Force Base, California

    DTIC Science & Technology

    1988-09-01

    found. The species composition of this community includes grasses such as slender wild oat (Avena barbata), red brome ( Bromus rubens), foxtail...Hordeum sp.), ripgutgrass ( Bromus diandrus), and Schismus barbatus. Native bunch grasses of the undisturbed valley grassland community, such as needle...the southwestern part of the land, dominated by Dallis grass ( Paspalum dilatatum). The central, previously developed area consists of various

  6. Aquilla Lake, Brazos River Basin, Texas, Pre-Impoundment Environmental Study: Supplement to Design Memorandum Number 9, Master Plan (in Response to: 40CFR 1505.3),

    DTIC Science & Technology

    1983-06-01

    dandelion was dominant, but sow thistle (Sonchus asper), and goldenrod were becoming established. Japanese brome ( Bromus japonicus) snd Johnson grass ...Sorghum halepense Japanese Brome Bromus japonicus Dallisgrass Paspalum dilatatun Downy Brome Bromus tectorum Scribner’s Dichanthelium Dichanthelium...back to the ground each year. Grasses and forbs, annuals or perennials (Hanson 1962). The vegetation complexity required 2 sampling methods - canopy

  7. Terrestrial Biological Inventory Degognia and Fountain Bluff Levee and Drainage District and Grand Tower Drainage and Levee District, Jackson County, Illinois.

    DTIC Science & Technology

    1978-08-01

    orchids. Southern Illinois Univ. Press, Carbondale, Illinois. 288 pp. Mohlenbrock, R. H. 1972. The illustrated flora of Illinois: Grasses : Bromus to... Paspalum . Southern Illinois Univ. Press, Carbondale, Illinois. 332 pp. Mohlenbrock, R. H. 1973. The illustrated flora of Illinois: Grasses : Panicum to...75%. Manna grass (Glyceria striata) and yellow buttercup (Ranunculus septentrionalis) are most frequent, with a frequency of 67%. Next frequent, at 50

  8. Testing Nine Archaeological Sites in the Downstream Corridor, Saylorville Lake, Iowa. 1982.

    DTIC Science & Technology

    1983-04-01

    2*- - - - - - - - - 2 polygonum or sedge Paspalum sp. - - -1 not identified CYPERACEAE ( sedge ) 6 - - due to lack of time JU CACEAE (rush...fields. Also present are sedges and rushes which are found along the river. Components at the Christenson site can be understood only in the context of

  9. Effects of salts and temperatures on post-irradiation growth of Penicillium exposed to ultraviolet

    SciTech Connect

    Valdez, R.; Siegel, B.Z.; Siegel, S.M.

    1981-01-01

    The growth of Penicillium notatum colonies after uv irradiation of dried mycelium or spores was studied in relation to post-irradiation temperature and salt environment. Dried mycelium and spores behaved differently with respect to sensitivity to temperature, salts and uv, especially the latter. Threshold inhibitory doses for spores were modified markedly either at 4 C or in magnesium and calcium chlorides. It is suggested that these temperature and salt effects are related to prevention of photochemical membrane damage.

  10. Why did the Fleming strain fail in penicillin industry?

    PubMed

    Rodríguez-Sáiz, Marta; Díez, Bruno; Barredo, José Luis

    2005-05-01

    Penicillin, discovered 75 years ago by Sir Alexander Fleming in Penicillium notatum, laid the foundations of modern antibiotic chemotherapy. Early work was carried out on the original Fleming strain, but it was later replaced by overproducing strains of Penicillium chrysogenum, which became the industrial penicillin producers. We show how a C(1357)-->T (A394V) change in the gene encoding PahA in P. chrysogenum may help to explain the drawback of P. notatum. PahA is a cytochrome P450 enzyme involved in the catabolism of phenylacetic acid (PA; a precursor of penicillin G). We expressed the pahA gene from P. notatum in P. chrysogenum obtaining transformants able to metabolize PA (P. chrysogenum does not), and observing penicillin production levels about fivefold lower than that of the parental strain. Our data thus show that a loss of function in P. chrysogenum PahA is directly related to penicillin overproduction, and support the historic choice of P. chrysogenum as the industrial producer of penicillin.

  11. Winona, Minnesota Flood Control Project and Waterfront Development.

    DTIC Science & Technology

    1976-01-01

    be seeded or sodded and then maintained by abutting property owners. By filling the floor of the ditch to the top of the channel wall, the ground would... Paspalum can be found in numbers. AQUATIC VEGETATION 2.040 The following account consists of excerpts from a paper written by William Green on...this species seldom sets seed to any extent on the river, there have been years when it seeded heavily, and then it was of considerable value to

  12. American River Watershed Investigation, California, Feasibility Report. Part 1. Main Report. Part 2. Environmental Impact Statement/Environmental Impact Report

    DTIC Science & Technology

    1991-12-01

    oak Avena fatua X X X Datlis grass Paspalum dilatatum X X Red brome Bromus rubra X X X Botttebrush squirrettaiL Sitanion hystrix X X X Notes: OAK...Continuied) COIWOM MANE SCIENTIFIC NME TYPICAL COIMJNITY Wild oats Avena fatua GRASS Crab grass Digitaria sanguinatis GRASS Brome grass Bromus rubens GRASS ...River. The Auburn area is generally developed, with heavy traffic volumes passing along Interstate 80 and northward along Highway 49 to Grass Valley

  13. Sterling C. Robertson Dam and Limestone Lake on the Navasota River, Texas (Leon, Limestone and Robertson Counties).

    DTIC Science & Technology

    1976-04-01

    Paspalum species, and bluestem. The cleared bottom- lands are vegetated predominantly with grasses and forbs with a few scattered trees and shrubs. Within...in contrast to the Black Prairie to the northwest dominated vegetationally by grasses and the Piney Woods to the southeast dominated by Pines.Oaks...it the proposed reservoir. From 1907 to 1930, I /1 to 2 million short tons were taken from 6 to 9 foot seams near Bear Grass and Evansville in

  14. Inventory of Rare of Endangered Vascular Plants Occurring in the Floodplain of the Mississippi River between Cairo, Illinois, and St. Paul, Minnesota, and in the Floodplain of the Illinois River between Grafton, Illinois, and Chicago,

    DTIC Science & Technology

    1975-01-01

    The illustrated flora of Illinois: Grasses : Bromus to Paspalum . Southern Illinois University Press, Carbon- dale. 332 pp. Mohlenbrock, R. H. 1973. The...species, calling it Eragrostis pilifera Scheele. r 17 Eragrostis reptans (Michx.) Nees Pony Grass Family Poaceae Status: Endangered Or possibly extinct...Illinois). This low-growing grass is distributed from Kentucky, Illinois, and Missouri south to Texas and Louisiana. It is also found as an exten- sion

  15. Environmental Assessment: Proposed Lakeview Marina Site Boat Ramp and Access, Saylorville Lake, Polk County, Iowa

    DTIC Science & Technology

    1988-08-01

    cover of yellow sweet clover, red clover, and a small amount of brome grass ( Bromus sp.). Trees within the upper zone include sapling and intermediate...clover, brome grass , and switchgrass ( Paspalum virgatum) with small amounts of goldenrod (Solidago sp.) poison ivy, milkweed (Amaranthus sp.), thistle...amount of brome grass ( Bromus sp.). Trees within the upper zone include sapling and intermediate size shagbark hickory, sumac (Rhus glabra), and white

  16. American River Watershed Investigation, California. Volume 3. Appendix M

    DTIC Science & Technology

    1991-12-01

    fatua X X X Dallis grass Paspalum dilatatum X X Red brome Bromus rubra X X X Bottlebrush squirreltail Sitanion hystrix X X X Notes: OAK -- Associated with...was ignored for two reasons. First, the analyses discounts apparent cohesion at very low stresses. In fact, vegetation ( grass roots) in the upper 6...roots or grass (See Plates 2 and 3 for typical banks). Closer examination of the banks revealed that the materials were often deposited in layers from

  17. Environmental Impact Statement for the New San Clemente Project, Monterey County, California - Regulatory Permit Application Number 16516S09. Appendices.

    DTIC Science & Technology

    1987-09-01

    seariola (Willow Lettuce), Melilotus albus (White Sweet Clover), Paspalum distriehum (Knotgrass), Polywogon monspeliensis (Rabbitfoot Grass ), Rumex...Equisetum spp (horsetail). 3. Dry Wash: Low annual herbs and grasses that occur in scoured or rocky substrate areas. Often the habitat is covered with mats...Narrow-leaved Bedstraw) - ME, OW Gairun aparine (Goose Grass ) - ME, R "G~iium californicum (California Bedstraw) - ME Lu.unioera interrupta (Chaparral

  18. Plants under Climatic Stress

    PubMed Central

    Taylor, A. O.; Rowley, J. A.

    1971-01-01

    Photosynthetic rates of both C4- and C3-pathway plants grown at 25 C were measured before and during a period of chilling stress at 10 C, and then again at 25 C following various periods at 10 C. When temperatures are first lowered photosynthetic rates drop immediately, then undergo a further reduction which is quite rapid in species such as Sorghum, maize, and Pennisetum; slower in soybean; and very slow in Paspalum and ryegrass. Visible light causes progressive permanent damage to the photosynthetic capacity of leaves during this period of lowered photosynthesis. The extent of damage increases with light intensity and the length of time leaves are held at 10 C but varies greatly between species, being roughly correlated with the extent to which chilling initially and subsequently lowers photosynthesis. Three days of chilling (10 C) at 170 w·m−2 reduces the photosynthetic capacity of youngest-mature Paspalum leaves only 30 to 40% while Sorghum leaves are essentially inoperative when returned to 25 C after the same stress. Root temperature has a substantial rapid effect on photosynthesis of soybean and little immediate effect on Sorghum. Photosynthesis of stress-intolerant species (Sorghum) is reduced only slightly more than that of semitolerant species (Paspalum) when temperatures are lowered at mid-photo-period, but to a far greater extent if temperatures are reduced at the commencement of a photoperiod. PMID:16657691

  19. Species and biogeochemical cycles of organic phosphorus in sediments from a river with different aquatic plants located in Huaihe River Watershed, China.

    PubMed

    Yuan, He Zhong; Pan, Wei; Ren, Li Jun; Liu, Eeng Feng; Shen, Ji; Geng, Qi Fang; An, Shu Qing

    2015-01-01

    The results of phosphorus fractionation in the sediments from a contaminated river containing different aquatic plants, analyzed by solution 31P-NMR for Organic Phosphorus, showed that the concentration of Inorganic Phosphorus dominated in all species and Organic Phosphorus accounted for over 20% of Total Phosphorus. In general, orthophosphate was dominant in all the sampling sites. The proportion of Organic Phosphorus accounting for the Total Phosphorus in the sediments with different plant decreased in the following order: Paspalum distichum>Typha orientalis>Hydrilla verticillata. Phosphorus-accumulation ability of Paspalum distichum was obviously stronger than Typha orientalis and Hydrilla verticillata. The Organic Phosphorus was in aquatic plants dominated by humic-associated P (Hu-P), which converted to Inorganic Ohosphorus more significantly in submerged plants than in emerged plants. The sediment dominated by Paspalum distichum abundantly accumulated Organic Phosphorus in the orthophosphate monoester fraction. The degradation and mineralization of orthophosphate monoester was the important source of high Inorganic Phosphorus concentration and net primary productivity in Suoxu River. The Organic Phosphorus derived from Typha orientalis and Hydrilla verticillata was dramatically converted to Inorganic Phosphorus when the environmental factors varied.

  20. Phytolith Assemblages and Systematic Associations in Grassland Species of the South-Eastern Pampean Plains, Argentina

    PubMed Central

    FERNÁNDEZ HONAINE, MARIANA; ZUCOL, ALEJANDRO F.; OSTERRIETH, MARGARITA L.

    2006-01-01

    • Background and Aims Phytolith descriptions of South American plant species are scarce. This knowledge is crucial for the interpretation of the fossil phytolith record of a region. In this study phytolith assemblages and systematic relationships of the main grasses and Asteraceae species of Paspalum quadrifarium grassland are described. • Methods Phytoliths from leaves of Poaceae and Asteraceae species were extracted by using a calcination technique. For each species, 350–400 phytoliths were counted and the relative frequency of each morphotype was calculated. Phytolith assemblages were subject to principal components analysis (PCA) and cluster analysis (Morisita index). • Key Results PCA and cluster analysis showed family (Poaceae vs. Asteraceae) and subfamily (within Poaceae) differentiation. Exceptions to general trends described for other species were detected. Floristic variants of Paspalum quadrifarium grassland can be separated by their phytolith assemblages. • Conclusions The study provides a reference collection of phytolith assemblages of the main Poaceae and Asteraceae species of Paspalum quadrifarium grassland and describes some phytolith morphotypes/systematic relationships useful for the analysis of fossil phytolith assemblages of the Pampean region. PMID:17030553

  1. Microbial exposure and mold-specific serum IgG levels among children with respiratory symptoms in 2 school buildings.

    PubMed

    Hyvärinen, Anne; Husman, Tuula; Laitinen, Sirpa; Meklin, Teija; Taskinen, Taina; Korppi, Matti; Nevalainen, Aino

    2003-05-01

    In this study, the authors determined the association between serum mold-specific immunoglobulin G (IgG) levels in primary school children (N = 181) with asthma, wheezing, or cough symptoms and exposure to indoor mold in 2 schools, with and without mold damage. Microbial exposure was determined with environmental sampling. Serum IgG antibody concentrations against 24 microbial strains were determined with enzyme-linked immunosorbent assay. Children's microbe-specific IgG levels were often higher in the reference school. There was an association between elevated serum IgG antibody levels to Penicillium notatum and moisture damage in the school. In addition, moisture damage both in school and at home was associated with Penicillium notatum and Eurotium amstelodami IgG levels. These observations comported with microbial findings in the index school. No other positive associations between IgG antibodies and microbial findings for the school buildings were observed. IgG levels in sera of school children did not provide a specific means for assessing the microbial exposure associated with moisture and microbial problems in the school buildings. Thus, IgG analysis cannot be readily suggested as a routine method for the evaluation of these exposures.

  2. Biotic elicitor enhanced production of psoralen in suspension cultures of Psoralea corylifolia L.

    PubMed Central

    Ahmed, Syed Abrar; Baig, Mirza Mushtaq Vaseem

    2014-01-01

    Cell cultures of Psoralea corylifolia L. were established from the leaf disk derived callus. The effect of different biotic elicitors prepared from the fungal extract (Aspergillus niger and Penicillium notatum), yeast extract and chitosan with different concentrations was studied. The increased synthesis of psoralen in 16-day old cell cultures under 16 h of light and 8 h of dark period was studied. Elicitation of psoralen in A. niger elicitor treated cells was found 9-fold higher over control cells. Treating the cells with P. notatum, yeast extract and chitosan elicitors lead to four to seven-fold higher psoralen accumulation over control cells. The extract of A. niger at 1.0% v/v increased the significant accumulation of psoralen (9850 μg/g DCW) in the cultured cells. Our study clearly shows that all the elicitors had the potential to increase the accumulation of psoralen but the A. niger elicitor at 1.0% v/v induced maximum accumulation. PMID:25313287

  3. Urban water budgets: a comparative study of three landscape management scenarios in southern California

    NASA Astrophysics Data System (ADS)

    Bijoor, N. S.; Haver, D.; Pataki, D. E.

    2009-12-01

    The fate of irrigation water in urban landscapes is highly uncertain, due in large part to uncertainties in urban ecohydrology. In this study, we compared evapotranspiration (ET), leaf-level stomatal conductance, and soil moisture of three landscapes managed under typical, retrofitted, and low-impact scenarios. The typical landscape consisted of fescue (Schedonorus phoenix (Scop.) Holub), a common cool-season turfgrass species. Watering was controlled by a timer and occurred on a daily basis, representative of irrigation by most homeowners. The retrofitted landscape consisted of seashore paspalum (Paspalum vaginatum), a warm-season species, and watering was based on measurements of soil moisture. The low-impact landscape consisted of mixed species of cool-season native sedge (Carex), and watering was based on measurements of weather conditions. The amount of irrigation received was highest in the typical landscape, and lowest in the retrofitted landscape. We hypothesized that the low-impact landscape would have the highest irrigation efficiency or IE (ET/applied irrigation water) while the typical landscape would have the lowest, due to differences in stomatal conductance and soil moisture. ET was measured using a chamber technique, and stomatal conductance was determined using a porometer. Destructive samples were used to estimate leaf area index (LAI) and soil moisture was measured using time domain reflectometry (TDR). We found no significant difference in soil moisture among landscapes, except in spring when the retrofitted landscape was drier than the other two. The average annual ET was similar among landscapes, though there were large seasonal differences. In the fall, the ET of sedge was higher than fescue, and paspalum did not differ from the other two species. In the winter, the ET of the warm-season grass paspalum was lower than the cool-season sedge and similar to fescue. In spring, there were no differences among species. In summer, the ET of paspalum

  4. Environmental Assessment for Fuel Storage Tank Removal and Replacement

    DTIC Science & Technology

    2004-10-23

    Straw bale dikes • Silt fences • Temporary sediment traps • Seeding Additionally, Charleston AFB is developing an erosion control database to assist...One-Flowered Broomrape G5 S? SC Oxypolis canbyi Canby’s Dropwort G2 S1 FE/SE Paspalum bifidum Bead-Grass G5 S? SC Peltandra sagittifolia Spoon-Flower...Mycteria americana Wood Stork G4 S1S2 FE/SE Pelecanus occidentalis Brown Pelican G4 S1S2 SC Picoides borealis Red-Cockaded Woodpecker G3 S2 FE/SE

  5. Aquatic plants for removal of mevinphos from the aquatic environment

    NASA Technical Reports Server (NTRS)

    Wolverton, B. C.

    1975-01-01

    Fragrant waterlily (Nymphaea odorata, Ait.), joint-grass (Paspalum distichum L.), and rush (Juncus repens, Michx.) were used to evaluate the effectiveness of vascular aquatic plants in removing the insecticide mevinphos (dimethyl-1-carbomethoxy-1propen-2-yl phosphate) from waters contaminated with this chemical. The emersed aquatic plants fragrant waterlily and joint-grass removed 87 and 93 ppm of mevinphos from water test systems in less than 2 weeks without apparent damage to the plants; whereas rush, a submersed plant, removed less insecticide than the water-soil controls. Water-soil control still contained toxic levels of this insecticide, as demonstrated by fish bioassay studies, after 35 days.

  6. (15)N natural abundance in plants of the Amazon River floodplain and potential atmospheric N2 fixation.

    PubMed

    Martinelli, L A; Victoria, R L; Trivelin, P C O; Devol, A H; Richey, J E

    1992-07-01

    The(15)N natural abundance values of various Amazon floodplain (várzea) plants was investigated. Samples of young leaf tissues were collected during three different periods of the river hydrography (low water, mid rising water and high water) and during one period in the Madeira River (high water). A large variation of(15)N abundance was observed, both among the different plant types and between the different flood stages. This variation probably, reflected, in part, the highly variable nature of the floodplain, sometimes dry and oxygenated and at other times inundated and anaerobic and, in part, changes in plant nitrogen metabolism. Comparison of the nitrogen isotopic composition of leguminous plants with that of non-leguminous plants showed that, on average, the(15)N abundance was lower in the legumes than non-legumes, suggesting active N-fixation. Also, the(15)N natural abundance in aquatic grasses of the generaPaspalum, was in general, lower than the(15)N abundance of aquatic grasses of the generaEchinochloa. As both of these grasses grow in the same general habitat, it appears thatPaspalum grasses may also be nitrogen fixers.

  7. Preventing establishment: an inventory of introduced plants in Puerto Villamil, Isabela Island, Galapagos.

    PubMed

    Guézou, Anne; Pozo, Paola; Buddenhagen, Christopher

    2007-10-17

    As part of an island-wide project to identify and eradicate potentially invasive plant species before they become established, a program of inventories is being carried out in the urban and agricultural zones of the four inhabited islands in Galapagos. This study reports the results of the inventory from Puerto Villamil, a coastal village representing the urban zone of Isabela Island. We visited all 1193 village properties to record the presence of the introduced plants. In addition, information was collected from half of the properties to determine evidence for potential invasiveness of the plant species. We recorded 261 vascular taxa, 13 of which were new records for Galapagos. Most of the species were intentionally grown (cultivated) (73.3%) and used principally as ornamentals. The most frequent taxa we encountered were Cocos nucifera (coconut tree) (22.1%) as a cultivated plant and Paspalum vaginatum (salt water couch) (13.2%) as a non cultivated plant. In addition 39 taxa were naturalized. On the basis of the invasiveness study, we recommend five species for eradication (Abutilon dianthum, Datura inoxia, Datura metel, Senna alata and Solanum capsicoides), one species for hybridization studies (Opuntia ficus-indica) and three species for control (Furcraea hexapetala, Leucaena leucocephala and Paspalum vaginatum).

  8. Photorespiration in C4 grasses remains slow under drought conditions.

    PubMed

    Carmo-Silva, Ana E; Powers, Stephen J; Keys, Alfred J; Arrabaça, Maria Celeste; Parry, Martin A J

    2008-07-01

    The CO(2)-concentrating mechanism present in C(4) plants decreases the oxygenase activity of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) and, consequently, photorespiratory rates in air. Under drought conditions, the intercellular CO(2) concentration may decrease and cause photorespiration to increase. The C(4) grasses Paspalum dilatatum Poiret, Cynodon dactylon (L.) Pers. and Zoysia japonica Steudel were grown in soil and drought was imposed by ceasing to provide water. Net CO(2) assimilation (A) and stomatal conductance to water vapour decreased with leaf dehydration. Decreased carbon and increased oxygen isotope composition were also observed under drought. The response of A to CO(2) suggested that the compensation point was zero in all species irrespective of the extent of drought stress. A slight decrease of A as O(2) concentration increased above 10% provided evidence for slow photorespiratory gas exchanges. Analysis of amino acids contained in the leaves, particularly the decrease of glycine after 30 s in darkness, supported the presence of slow photorespiration rates, but these were slightly faster in Cynodon dactylon than in Paspalum dilatatum and Zoysia japonica. Although the contents of glycine and serine increased with dehydration and mechanistic modelling of C(4) photosynthesis suggested slightly increased photorespiration rates in proportion to photosynthesis, the results provide evidence that photorespiration remained slow under drought conditions.

  9. Preventing Establishment: An Inventory of Introduced Plants in Puerto Villamil, Isabela Island, Galapagos

    PubMed Central

    Guézou, Anne; Pozo, Paola; Buddenhagen, Christopher

    2007-01-01

    As part of an island-wide project to identify and eradicate potentially invasive plant species before they become established, a program of inventories is being carried out in the urban and agricultural zones of the four inhabited islands in Galapagos. This study reports the results of the inventory from Puerto Villamil, a coastal village representing the urban zone of Isabela Island. We visited all 1193 village properties to record the presence of the introduced plants. In addition, information was collected from half of the properties to determine evidence for potential invasiveness of the plant species. We recorded 261 vascular taxa, 13 of which were new records for Galapagos. Most of the species were intentionally grown (cultivated) (73.3%) and used principally as ornamentals. The most frequent taxa we encountered were Cocos nucifera (coconut tree) (22.1%) as a cultivated plant and Paspalum vaginatum (salt water couch) (13.2%) as a non cultivated plant. In addition 39 taxa were naturalized. On the basis of the invasiveness study, we recommend five species for eradication (Abutilon dianthum, Datura inoxia, Datura metel, Senna alata and Solanum capsicoides), one species for hybridization studies (Opuntia ficus-indica) and three species for control (Furcraea hexapetala, Leucaena leucocephala and Paspalum vaginatum). PMID:17940606

  10. Phytochemical screening and antimicrobial activity of Coccinia cordifolia L. plant.

    PubMed

    Khatun, Shahanaz; Pervin, Farzana; Karim, Mohammad Rezaul; Ashraduzzaman, Mohammad; Rosma, Ahmad

    2012-10-01

    The medicinal plant, Coccinia cordifolia L. was analyzed for its chemical composition. The antimicrobial activities of the methanol, water, ethanol and ethyl acetate extracts of Coccinia cordifolia L. plant were evaluated against some Gram positive bacteria (Sarcina lutea, Bacillus subtilis and Staphylococcus aureus), Gram negative bacteria (Salmonella typhi, Shigella dysenteriae and Escherichia coli) and fungi (Candida albicans, Aspergillus niger and Penicillium notatum). Chemical analysis showed that the plant is rich in nutrients, especially antioxidant compounds such as total phenol, vitamin C and β-carotene. Phytochemical screening showed that the methanolic extract contains the bioactive constituents such as tannins, saponins, phenols, flavonoids and terpenoids. In the methanolic extract of the plant, promising antimicrobial potential was observed against the tested microorganism. Methanolic extract showed highest activity against Shigella dysenteriae, Escherichia coli, Staphylococcus aureus, and Candida albicans compared to the other extracts. Water extract showed less antimicrobial activity as compared to other extractants.

  11. On micro-organisms of the stratosphere.

    PubMed

    Imshenetsky, A A; Lysenko, S V; Kazakov, G A; Ramkova, N V

    1976-01-01

    The lower parts of the biosphere are well studied since various live beings are found in oceans and at the bottom of large hollows. Contrary to this, we have no data about the upper boundaries of the biosphere. Samples were obtained with the help of specially constructed analysers which were installed in meteorological rockets and reached an altitude of 100 km. With the help of methods completely excluding the possibility of contamination of analysers with outside microflora it became possible to prove that earth microbes carried by air currents are present in the stratosphere. At an altitude of 48-77 km Circinella muscae, Asp. niger, Penicillium notatum were found as well as mycobacterium and micrococcus. The correlation of these cultures with external factors is studied and the weight of one conidium or one cell in isolated micro-organisms is estimated. These investigations will continue.

  12. Brine organisms and the question of habitat-specific adaptation

    NASA Technical Reports Server (NTRS)

    Siegel, B. Z.; Siegel, S. M.; Speitel, T.; Waber, J.; Stoecker, R.

    1984-01-01

    The question of adaptivity to extremely saline water environments is discussed, with attention given to the evolutionary performance of four common organisms including Cladonia skottsbergii, Penicillium notatum, Nostoc, and Dunaliella salina. Samples of each organism were collected and subjected to experimental conditions similar to extreme marine and limnetic environments in the Dead Sea and Don Juan Pond in the upper Wright valley of Antarctica. Measurements were made of isotope uptake and carbon dioxide production, and photoautotrophs were taken. It is found that all of the organisms responded quickly to the need to adapt to the extreme environments. It is concluded that a degree of uncertainty exists in the perception that the abundance of bulk water on the earth is in itself essential for life.

  13. Upper boundary of the biosphere.

    PubMed Central

    Imshenetsky, A A; Lysenko, S V; Kazakov, G A

    1978-01-01

    By using meterological rockets fitted with specially designed analyzers, samples for microbiological investigation have been taken. The analyzer design prevented extraneous microorganisms from penetrating into the analyzer. Before being used, the analyzers were sterilized with high gamma-ray doses. For the first time microorganisms have been detected in the mesosphere at an altitude of 48 to 77 km. The microorganisms are microscopic fungi having black conidia or spores (Circinella muscae, Aspergillus niger, Papulaspora anomala) and one species forming green conidia (Penicillium notatum). Colonies of Mycobacterium luteum and Micrococcus albus have also grown. Five of the six species have synthesized pigments. The presence of pigmented microbial forms leads us to believe that natural selection is occurring in the mesosphere because cells possessing chromogenous pigments (carotenoids, melanins) are more resistant to ultraviolet-ray action. A greater number of microorganisms have been registered in the mesosphere during dust storms than in the absence of strong winds. Images PMID:623455

  14. Synthesis, Spectral investigation (¹H, ¹³C) and Anti-microbial Screening of benzophenone imines.

    PubMed

    Khosa, Muhammad Kaleem; Jamal, Muhammad Asghar; Saif, Muhammad Jawad; Muneer, Majid; Rehman, Fazalur; Farman, Muhammad; Shoaib, Hafiz Muhammad; Shahid, Muhammad; Hameed, Shabnam

    2015-11-01

    New series of benzophenone imines with general formula Ph2-C=NR; R = Benzyl, 4-Fluorobenzyl, Naphthyl, Phenyl, 4-Nitrophenyl were synthesized by condensation of dichlorodiphenylmethane and different aromatic primary amines (1:1) Those imines were characterized by different physiochemical and spectroscopic techniques like melting point, elemental analysis, FT-IR, multinuclear NMR (¹H, ¹³C). After characterization, imines were subjected to anti-microbial activities. All compounds showed promising activity against different bacterial strains like Escherichia coli, Bacillussubtilis, Pasturellam ultocida and Staphylococcus aureus as well as fungal strains like Alternata alternaria, Ganoderma lucidium, Penicillium notatum and Trichoderma harzianum using Amoxicillin and Flucanazole as a standard drugs respectively.

  15. Toxicity and bioaccumulation of biosolids-borne triclocarban (TCC) in terrestrial organisms.

    PubMed

    Snyder, Elizabeth Hodges; O'Connor, George A; McAvoy, Drew C

    2011-01-01

    Triclocarban (TCC) toxicity and bioaccumulation data are primarily limited to direct human and animal dermal exposures, animal ingestion exposures to neat and feed-spiked TCC, and/or aquatic organism exposures. Three non-human, terrestrial organism groups anticipated to be the most highly exposed to land-applied, biosolids-borne TCC are soil microbes, earthworms, and plants. The three ecological receptors are expected to be at particular risk due to unique modes of exposure (e.g. constant, direct contact with soil; uptake of amended soil and pore water), inherently greater sensitivity to environmental contaminants (e.g. increased body burdens, permeable membranes), and susceptibility to minute changes in the soil environment. The toxicities of biosolids-borne TCC to Eisenia fetida earthworms and soil microbial communities were characterized using adaptations of the USEPA Office of Prevention, Pesticides, and Toxic Substances (OPPTS) Guidelines 850.6200 (Earthworm Subchronic Toxicity Test) and 850.5100 (Soil Microbial Community Toxicity Test), respectively. The resultant calculated TCC LC50 value for E. fetida was 40 mg TCC kg amended fine sand(-1). Biosolids-borne TCC in an amended fine sand had no significant effect on soil microbial community respiration, ammonification, or nitrification. Bioaccumulation of biosolids-borne TCC by E. fetida and Paspulum notatum was measured to characterize potential biosolids-borne TCC movement through the food chain. Dry-weight TCC bioaccumulation factor (BAF) values in E. fetida and P. notatum ranged from 5.2-18 and 0.00041-0.007 (gsoil gtissue(-1)), respectively.

  16. [The study of profile of hypersensitivity to pollen and fungal allergens in the Moscow region].

    PubMed

    Akhapkina, I G; Krakhanenkova, S N; Dobronravova, E V; Shushpanova, E N

    2014-05-01

    The profile of hypersensitivity to pollen and fungal allergens is an important element of common pattern of immune diseases needed for development of effective pharmaceuticals. The purpose of the study was to analyze the rate of detection of combined forms of hypersensitivity to pollen and fungal allergens (pollen of birch, hazel, cocksfoot, wormwood, fungi A. alternata, C. herbarum, R. nigricans, P. notatum, C. albicans, A. fumigatus) in the Moscow region on the basis of data of scarification skin samples. The mono-sensibilization was established in 23.36% of all cases of hypersensitivity. At that, among leading allergens turned out A. alternata and cocksfoot pollen (6.54% and 4.67%), followed by allergens of wormwood pollen, P. notatum, R. nigricans, birch pollen and C. albicans (3.74%, 3.74%, 1.87%, 1.87% and 0.93% correspondingly). The polysensibilization was established in 51.40% of cases. Besides, the combined hypersensitivity to pollen allergens of plants (20.26%) and to pollen and fungal allergens (20.56%) occurred more frequently In the group of patients with polysensibilization predominated combined allergic reactions to pollen allergens and A. alternata allergens (36.36%). On the whole, most frequently occurred sensitization to allergens of birch, hazel, cocksfoot, wormwood and A. alternata allergen (76.14%, 69.32%, 57.95%, 55.68%, 39.77% and 56.82% correspondingly). In the Moscow region predominate combined forms of hypersensitivity to two and more pollen and fungal allergens. The polysensitization to pollen allergens and A. alternata allergen occurs more frequently.

  17. Physiological and Growth Responses of Six Turfgrass Species Relative to Salinity Tolerance

    PubMed Central

    Uddin, Md. Kamal; Juraimi, Abdul Shukor; Ismail, Mohd. Razi; Hossain, Md. Alamgir; Othman, Radziah; Abdul Rahim, Anuar

    2012-01-01

    The demand for salinity-tolerant turfgrasses is increasing due to augmented use of effluent or low-quality water (sea water) for turf irrigation and the growing turfgrass industry in coastal areas. Experimental plants, grown in plastic pots filled with a mixture of river sand and KOSASR peat (9 : 1), were irrigated with sea water at different dilutions imparting salinity levels of 0, 8, 16, 24, 32, 40, or 48 dS m−1. Salinity tolerance was evaluated on the basis of leaf firing, shoot and root growth reduction, proline content, and relative water content. Paspalum vaginatum was found to be most salt tolerant followed by Zoysia japonica and Zoysia matrella, while Digitaria didactyla, Cynodon dactylon “Tifdwarf,” and Cynodon dactylon “Satiri” were moderately tolerant. The results indicate the importance of turfgrass varietal selection for saline environments. PMID:22666166

  18. Xiphidorus amazonensis n. sp. (Nematoda: Longidoridae) from the Brazilian Amazon Basin.

    PubMed

    Uesugi, C H; Huang, C S; Cares, J E

    1985-07-01

    Xiphidorus amazonensis n. sp. was found in the rhizospheres of Jatropha curcas, Musa sp., Anona muricata, Cassia tora, Panicum laxum, Paspalum fasciculatum, Aeschynomene sensitiva, Saccharum officinarum, Manihot esculenta, Abelmoschus esculentus, Tamarindus indica, Mangifera indica, Vigna unguiculata, Zea mays, Commelina sp., Cyperus rotundus, Fimbristylis miliacea, Citrus sinensis, and Eichhornia crassipes on the Amazon River island of Xiborena, approximately 40 km southeast of Manaus, capital of the State of Amazonas. The type habitat is flooded annually for about 6 months by the Amazon River. Xiphidorus amazonensis n. sp. differs from the closely related species Xiphidorus yepesara Monteiro, 1976 by the larger size, by a, b, and c values, and by the rounded tail terminus. It also resembles Xiphidorus tucumanensis Chaves and Coomans, 1984, but can be distinguished by its larger size, larger a, b, and c values, more conical female tail, bilobed amphidial pouch, and the presence of a spermatheca full of sperm.

  19. Vegetation Status of the Keoladeo National Park, Bharatpur, Rajasthan, India (April 2009)

    USGS Publications Warehouse

    Middleton, Beth A.

    2009-01-01

    The biodiversity of aquatic plant species may be reduced in the future by drought and/or climate change in monsoonal wetlands. After a number of years of low water levels, the aquatic vegetation of the Keoladeo National Park in Bharatpur, Rajasthan, India, was assessed. Though likely reduced in areal extent, most of the aquatic species were found in locations in the park that contained the seed bank of aquatic species in the 1980s. Some of the species of concern observed included Cyperus rotundus, Nymphoides indica, Paspalum distichum, Potamogeton pectinatus, Scirpus tuberosus, and Vallisneria natans. While it is likely that the abundance of these species has declined over time, this cannot be determined quantitatively without detailed field studies designed to replicate the 1980s analyses.

  20. Population Dynamics of Plant Nematodes in Cultivated Soil: Effect of Sod-based Rotations in Cecil Sandy Loam

    PubMed Central

    Brodie, B. B.; Good, J. M.; Adams, W. E.

    1969-01-01

    In a 6-year study of four nematode species in sod-based corn (Zea mays) rotations, population densities varied with different cropping systems. Continuous corn, with or without a winter rye (Secale cereale) or vetch (Vicia villosa) cover, favored an increase of Pratylenchus zeae and suppressed Trichodorus christiei, Helicotylenchus dihystera, and Xiphinema americanum. A four-year sod-based rotation (3 years sod, 1 year corn) of 'Coastal' bermudagrass (Cynodon dactylon) and fescue (Festuca arundinacea) was less favorable for P. zeae than was monocultured corn but was more favorable for T. christiei. Alfalfa (Medicago sativum) and rescue favored an increase of T. christiei but suppressed the other three species. 'Coastal' bermudagrass and 'Pensacola' bahiagrass (Paspalum notaturn) were not favorable for extensive development of any nematode species present. In longer term studies, of which these are a part, all four species survived for 10 years in relatively low numbers in bermudagrass and bahiagrass sods. PMID:19325691

  1. Molecular tools to understand the bioremediation effect of plants and earthworms on contaminated marine sediments.

    PubMed

    Moreno, Beatriz; Cañizares, Rosa; Macci, Cristina; Doni, Serena; Masciandaro, Grazia; Benitez, Emilio

    2015-12-30

    A meso-scale pilot plant was set up to test the efficiency of a bioremediation scheme applied to marine sediments contaminated by heavy metals and hydrocarbons. The experiment was implemented for three years in two stages using two remediation agents: plants (Paspalum vaginatum and Tamarix gallica) and earthworms (Eisenia fetida). DNA and RNA-based methodologies were applied to elucidate the dynamics of the bacterial population and were related to improving biological and chemical conditions of the sediments. Bioremediation strategies were successful in removing pollutants from the contaminated sediments and specialization within the bacterial community related to the type of contamination present was detected in the different stages of the process. The highest response of Gram-positive PAH-degraders to the contamination was detected at the beginning and after the first stage of the experiment, corresponding to the uppermost values of degradation.

  2. Cloning plants by seeds: Inheritance models and candidate genes to increase fundamental knowledge for engineering apomixis in sexual crops.

    PubMed

    Pupilli, Fulvio; Barcaccia, Gianni

    2012-06-30

    Apomixis is desirable in agriculture as a reproductive strategy for cloning plants by seeds. Because embryos derive from the parthenogenic development of apomeiotic egg cells, apomixis excludes fertilization in addition to meiotic segregation and recombination, resulting in offspring that are exact replicas of the parent. Introgression of apomixis from wild relatives to crop species and transformation of sexual genotypes into apomictically reproducing ones are long-held goals of plant breeding. In fact, it is generally accepted that the introduction of apomixis into agronomically important crops will have revolutionary implications for agriculture. This review deals with the current genetic and molecular findings that have been collected from model species to elucidate the mechanisms of apomeiosis, parthenogenesis and apomixis as a whole. Our goal is to critically determine whether biotechnology can combine key genes known to control the expression of the processes miming the main components of apomixis in plants. Two natural apomicts, as the eudicot Hypericum perforatum L. (St. John's wort) and the monocot Paspalum spp. (crowngrass), and the sexual model species Arabidopsis thaliana are ideally suited for such investigations at the genomic and biotechnological levels. Some novel views and original concepts have been faced on this review, including (i) the parallel between Y-chromosome and apomixis-bearing chromosome (e.g., comparative genomic analyses revealed common features as repression of recombination events, accumulation of transposable elements and degeneration of genes) from the most primitive (Hypericum-type) to the most advanced (Paspalum-type) in evolutionary terms, and (ii) the link between apomixis and gene-specific silencing mechanisms (i.e., likely based on chromatin remodelling factors), with merging lines of evidence regarding the role of auxin in cell fate specification of embryo sac and egg cell development in Arabidopsis. The production of

  3. Localized breeding of the Anopheles gambiae complex (Diptera: Culicidae) along the River Gambia, West Africa.

    PubMed

    Bøgh, C; Bøgh, C; Clarke, S E; Jawara, M; Thomas, C J; Lindsay, S W

    2003-08-01

    A study was undertaken to identify the major larval habitats of the Anopheles gambiae (Giles) complex in rural Gambia. Mosquito larvae and pupae were sampled along transects and in specific habitats in the central region of the country during the rainy seasons of 1996 and 1997. The sampling showed that the major breeding sites were located on the flooded alluvial soils bordering the river. The largest numbers of larvae were found during September, one month after the peak rains. Polymerase chain reaction analysis of specimens showed that Anopheles melas (Theobald) was the dominant species in the flooded areas (81.5%), followed by A. gambiae sensu stricto (Giles) (18.0%) and A. arabiensis (Patton) (0.5%). By sampling in specific habitats it was evident that A. arabiensis was mainly breeding in rain-fed rice fields along the edge of the alluvial soils. Anopheles melas and A. gambiae s.s. often coexisted but whereas A. melas were found in water with a salinity of up to 72% sea water (25.2 g NaCl l(-1)), A. gambiae s.s. only occurred in water with up to 30% sea water (10.5 g NaCl l(-1)). Anopheles melas larvae were found in association with plant communities dominated by sedges and grasses (Eleocharis sp., Paspalum sp., Sporobolus sp.) and sea-purslane Sesuvium portulacastrum (L.) and the presence of cattle hoof prints, whereas A. gambiae s.s. larvae mainly occurred in association with Paspalum sp. and Eleocharis sp. The study showed that even during the peak rainy season, breeding of the A. gambiae complex is almost entirely restricted to the extensive alluvial areas along the river.

  4. The role of plant type and salinity in the selection for the denitrifying community structure in the rhizosphere of wetland vegetation.

    PubMed

    Bañeras, Luís; Ruiz-Rueda, Olaya; López-Flores, Rocío; Quintana, Xavier D; Hallin, Sara

    2012-06-01

    Coastal wetlands, as transient links from terrestrial to marine environments, are important for nitrogen removal by denitrification. Denitrification strongly depends on both the presence of emergent plants and the denitrifier communities selected by different plant species. In this study, the effects of vegetation and habitat heterogeneity on the community of denitrifying bacteria were investigated in nine coastal wetlands in two preserved areas of Spain. Sampling locations were selected to cover a range of salinity (0.81 to 31.3 mS/cm) and nitrate concentrations (0.1 to 303 μM NO3-), allowing the evaluation of environmental variables that select for denitrifier communities in the rhizosphere of Phragmites sp., Ruppia sp., and Paspalum sp. Potential nitrate reduction rates were found to be dependent on the sampling time and plant species and related to the denitrifier community structure, which was assessed by terminal restriction fragment length polymorphism analysis of the functional genes nirS, nirK and nosZ. The results showed that denitrifier community structure was also governed by plant species and salinity, with significant influences of other variables, such as sampling time and location. Ruppia sp. and Phragmites sp. selected for certain communities, whereas this was not the case for Paspalum sp. The plant species effect was strongest on nirK-type denitrifiers, whereas water carbon content was a significant factor defining the structure of the nosZ-harboring community. The differences recognized using the three functional gene markers indicated that different drivers act on denitrifying populations capable of complete denitrification, compared to the overall denitrifier community. This finding may have implications for emissions of the greenhouse gas nitrous oxide.

  5. Proteomics shows new faces for the old penicillin producer Penicillium chrysogenum.

    PubMed

    Barreiro, Carlos; Martín, Juan F; García-Estrada, Carlos

    2012-01-01

    Fungi comprise a vast group of microorganisms including the Ascomycota (majority of all described fungi), the Basidiomycota (mushrooms or higher fungi), and the Zygomycota and Chytridiomycota (basal or lower fungi) that produce industrially interesting secondary metabolites, such as β-lactam antibiotics. These compounds are one of the most commonly prescribed drugs world-wide. Since Fleming's initial discovery of Penicillium notatum 80 years ago, the role of Penicillium as an antimicrobial source became patent. After the isolation of Penicillium chrysogenum NRRL 1951 six decades ago, classical mutagenesis and screening programs led to the development of industrial strains with increased productivity (at least three orders of magnitude). The new "omics" era has provided the key to understand the underlying mechanisms of the industrial strain improvement process. The review of different proteomics methods applied to P. chrysogenum has revealed that industrial modification of this microorganism was a consequence of a careful rebalancing of several metabolic pathways. In addition, the secretome analysis of P. chrysogenum has opened the door to new industrial applications for this versatile filamentous fungus.

  6. Synthesis, characteristics and antimicrobial activity of ZnO nanoparticles

    NASA Astrophysics Data System (ADS)

    Janaki, A. Chinnammal; Sailatha, E.; Gunasekaran, S.

    2015-06-01

    The utilization of various plant resources for the bio synthesis of metallic nano particles is called green technology and it does not utilize any harmful protocols. Present study focuses on the green synthesis of ZnO nano particles by Zinc Carbonate and utilizing the bio-components of powder extract of dry ginger rhizome (Zingiber officinale). The ZnO nano crystallites of average size range of 23-26 nm have been synthesized by rapid, simple and eco friendly method. Zinc oxide nano particles were characterized by using X-ray diffraction (XRD), Scanning Electron Microscope (SEM), Energy Dispersive X-ray spectroscopy (EDX). FTIR spectra confirmed the adsorption of surfactant molecules at the surface of ZnO nanoparticles and the presence of ZnO bonding. Antimicrobial activity of ZnO nano particles was done by well diffusion method against pathogenic organisms like Klebsiella pneumonia, Staphylococcus aureus and Candida albicans and Penicillium notatum. It is observed that the ZnO synthesized in the process has the efficient antimicrobial activity.

  7. Taxonomic and nomenclatural aspects of Hypoxylon taxa from southern South America proposed by Spegazzini.

    PubMed

    Hladki, Adriana I; Romero, Andrea I

    2009-01-01

    The holotypes and isotypes of 20 Hypoxylon taxa described by Spegazzini have been examined and their taxonomic positions and nomenclatural problems are discussed. Two new combinations, Annulohypoxylon apiahynum comb. nov. and A. subeffusum comb. nov., are proposed. H. goliath is considered a synonym of Rosellinia bunodes. H. albostigmatosum and H. guarapiense are synonyms of H. anthochroum, H. anthracoderma of H. monticulosum, H. mbaiense of H. notatum, H. paulistanum of H. diatrypeoides, H. plumbeum and H. rubiginosum var. microcarpum of H. perforatum. H. porteri and H. intermedium belong in Biscogniauxia capnodes, H. puiggarii in Annulophypoxylon subeffusum, H. subvinosum. in H. lenormandii, H. turbinatum var. guaraniticum in Phylacia turbinata and H. valsarioides in Creosphaeria sassafras. H. leptascum is transferred to A. leptascum, H. circostomum to Nemania circostoma and H. latissimum to N. latissima. The holotype of H. albostigmatosum has been recovered, thus the lectotypification by Shear no longer is needed. H. subnigricans and H. umbilicatum are confirmed as good taxa. H. anthochroum and H. lenormandii are reported as first records from Argentina (Tucumán).

  8. Proteomics Shows New Faces for the Old Penicillin Producer Penicillium chrysogenum

    PubMed Central

    Barreiro, Carlos; Martín, Juan F.; García-Estrada, Carlos

    2012-01-01

    Fungi comprise a vast group of microorganisms including the Ascomycota (majority of all described fungi), the Basidiomycota (mushrooms or higher fungi), and the Zygomycota and Chytridiomycota (basal or lower fungi) that produce industrially interesting secondary metabolites, such as β-lactam antibiotics. These compounds are one of the most commonly prescribed drugs world-wide. Since Fleming's initial discovery of Penicillium notatum 80 years ago, the role of Penicillium as an antimicrobial source became patent. After the isolation of Penicillium chrysogenum NRRL 1951 six decades ago, classical mutagenesis and screening programs led to the development of industrial strains with increased productivity (at least three orders of magnitude). The new “omics” era has provided the key to understand the underlying mechanisms of the industrial strain improvement process. The review of different proteomics methods applied to P. chrysogenum has revealed that industrial modification of this microorganism was a consequence of a careful rebalancing of several metabolic pathways. In addition, the secretome analysis of P. chrysogenum has opened the door to new industrial applications for this versatile filamentous fungus. PMID:22318718

  9. Synthesis, characteristics and antimicrobial activity of ZnO nanoparticles.

    PubMed

    Janaki, A Chinnammal; Sailatha, E; Gunasekaran, S

    2015-06-05

    The utilization of various plant resources for the bio synthesis of metallic nano particles is called green technology and it does not utilize any harmful protocols. Present study focuses on the green synthesis of ZnO nano particles by Zinc Carbonate and utilizing the bio-components of powder extract of dry ginger rhizome (Zingiber officinale). The ZnO nano crystallites of average size range of 23-26 nm have been synthesized by rapid, simple and eco friendly method. Zinc oxide nano particles were characterized by using X-ray diffraction (XRD), Scanning Electron Microscope (SEM), Energy Dispersive X-ray spectroscopy (EDX). FTIR spectra confirmed the adsorption of surfactant molecules at the surface of ZnO nanoparticles and the presence of ZnO bonding. Antimicrobial activity of ZnO nano particles was done by well diffusion method against pathogenic organisms like Klebsiella pneumonia, Staphylococcus aureus and Candida albicans and Penicillium notatum. It is observed that the ZnO synthesized in the process has the efficient antimicrobial activity.

  10. Sensitization Rates for Various Allergens in Children with Allergic Rhinitis in Qingdao, China.

    PubMed

    Lin, Hang; Lin, Rongjun; Li, Na

    2015-09-07

    The aim of this study was to determine the prevalence of sensitization to common allergens in children with allergic rhinitis (AR) living in Qingdao, China. We conducted a retrospective analysis for AR cases, who underwent skin prick tests (SPT) in Qingdao. A total of 2841 children with AR qualified for the inclusion criteria (Age 3-5 years: 1500 children; Age 6-12 years: 1341 children). The most common inhaled allergens to which the AR children were sensitive were Dermatophagoides pteronyssinus (69.3%), Dermatophagoides farinae (66.2%) and mould 1 (Penicillium notatum 38.9%); while the corresponding ingested allergens were mussel (39.2%), shrimp (36.3%) and carp (36.5%). The prevalence of sensitization to inhaled allergens and food allergens was higher in children >6 years of age as compared to that in children 3-5 years of age (all p < 0.05). Children >6 years old were more sensitive to dust mite as compared to children 3-5 years old (p < 0.05). Sensitization to dust mite was more common in males than in females (p = 0.05). In this study, Dermatophagoides pteronyssinus and Dermatophagoides farinae were the most common allergens causing AR in children in Qingdao, China. Older children with AR, particularly males, were found to be more sensitive to dust mite.

  11. Chemical composition and biological activities of essential oil from the leaves of Sesuvium portulacastrum.

    PubMed

    Magwa, Michael L; Gundidza, Mazuru; Gweru, Nyasha; Humphrey, Godfred

    2006-01-03

    Sesuvium portulacastrum has long been used as a remedy for fever and scurvy. Hydrodistillation was used to extract the essential oil from the fresh leaves of Sesuvium portulacastrum. The essential oil yield obtained was 0.15%. Using GC-MS analysis, alpha-pinene, camphene, beta-pinene, alpha-terpinene, O-cymene, limonene, 1,8-cineole, alpha-terpinene, bornyl acetate, tridecane, trans-caryophyllene and alpha-humulene were identified. The hole plate diffusion method was used for antibacterial testing. The essential oil exhibited antibacterial activity against Acetobacter calcoacetica, Bacillus subtillis, Clostridium sporogenes, Clostridium perfringens, Escherichia coli, Salmonella typhii, Staphylococcus aureus and Yersinia enterocolitica. The mycelium growth inhibition method was used for the antifungal testing. The oil exhibited antifungal activity against Candida albicans, Aspergillus niger, Aspergillus flavus and Penicillium notatum. Using the beta-carotene, acetone and linoleic acid method for the antioxidant testing, the essential oil showed antioxidant activity threshold of 15.9 mm mean zone of color retention.

  12. Resistance of stratospheric and mesospheric micro-organisms to extreme factors.

    PubMed

    Imshenetsky, A A; Lysenko, S V; Kasakov, G A; Ramkova, N V

    1977-01-01

    Studies of the stratosphere and mesosphere, by means of special analysers installed on meteorological rockets, have thrown more light on our knowledge of the upper boundary of the biosphere. The presence of the following micro-organisms was registered at heights of 49-77 km: Aspergillus niger, Penicillium notatum, Circinella muscae, Papulaspora anomala, Mycobacterium luteum and Micrococcus albus. The isolated micro-organisms were subjected to the action of gamma-irradiation, high vacuum and UV radiation in order to evaluate the quality of sterilization by gamma-rays (3.2-3.5 Mrad) prior to sampling and the resistance of these micro-organisms to physical factors of the stratosphere and mesosphere. No species with high radio-resistance were detected among the isolated cultures. The D10 index for fungal spores and bacterial vegetative cells, freeze-dried or suspended in a physiological solution, did not exceed 290 krad. These data confirm that sterilization of the analyser with gamma-rays assured the purity of biological experiments during sampling. The isolated micro-organisms were found to be very resistant to high vacuum (10(-9) mmHg) and UV radiation, with the exception of the pigmentless Micrococcus albus. This evidence shows that pigmented micro-organisms can survive in the earth's atmosphere at high altitudes.

  13. Broad-spectrum antifungal-producing lactic acid bacteria and their application in fruit models.

    PubMed

    Crowley, Sarah; Mahony, Jennifer; van Sinderen, Douwe

    2013-07-01

    A large-scale screen of some 7,000 presumptive lactic acid bacteria (LAB), isolated from animal, human, or plant origin, identified 1,149 isolates with inhibitory activity against the food-spoilage mould Penicillium expansum. In excess of 500 LAB isolates were subsequently identified to produce a broad spectrum of activity against P. expansum, Penicillium digitatum, Penicillium notatum, Penicillium roqueforti, Rhizopus stolonifer, Fusarium culmorum, Aspergillus fumigatus and Rhodotorula mucilaginosa. Partial 16S rRNA sequencing of 94 broad spectrum isolates revealed that the majority of antifungal producers were strains of Lactobacillus plantarum. The remaining population was composed of Weissella confusa and Pediococcus pentosaceous isolates. Characterization of six selected broad-spectrum antifungal LAB isolates revealed that antifungal activity is maximal at a temperature of 30 °C, a pH of 4.0 and is stable across a variety of salt concentrations. The antifungal compound(s) was shown to be neither proteinaceous nor volatile in nature. P. pentosaceous 54 was shown to have protective properties against P. expansum spoilage when applied in pear, plum and grape models, therefore representing an excellent candidate for food-related applications.

  14. Alteration of Acrylonitrile-Methylacrylate-Butadiene Terpolymer by Nocardia rhodochrous and Penicillium notatum†

    PubMed Central

    Antoine, A. D.; Dean, A. V.; Gilbert, S. G.

    1980-01-01

    [14C]Barex-210, a terpolymer of acrylonitrile, methylacrylate, and butadiene, was tested for bioconversion. Powdered samples of polymer, each specifically 14C labeled at different carbon atoms of the polymer, were incubated with either Nocardia rhodochrous or Penicillium notatum in an enriched growth medium for various periods of time. After 6 months of incubation, the 14C-labeled polymer was transformed from a high-molecular-weight material completely soluble in dimethyl formamide (DMF) into both a lower-molecular-weight form still soluble in DMF and a second form that was no longer soluble in DMF. The amount of 14C-labeled carbon atoms converted into DMF-insoluble material was 8% of the backbone carbon-carbon atoms and 12% of the side-chain nitrile and acrylate atoms from the acrylonitrile-methylacrylate copolymer and 60% of the elastomer (acrylonitrile-butadiene copolymer) atoms. Metabolism of the polymer was not established from measurements of metabolic 14CO2. Evolution of 14CO2 amounted to only 0.3, 0.6, 1.8, and 3.3% of these four fractions, respectively. Although the transformation of high-molecular-weight polymer into DMF-insoluble material was rapid in the early stages of microbial growth, the accompanying CO2 evolution was much slower. Further evidence of polymer alteration was indicated by the infrared spectrum of the insoluble material, which showed a disappearance of the nitrile and methylacrylate peaks. PMID:16345541

  15. Influence of growth regulators and elicitors on cell growth and α-tocopherol and pigment productions in cell cultures of Carthamus tinctorius L.

    PubMed

    Chavan, Smita P; Lokhande, Vinayak H; Nitnaware, Kirti M; Nikam, Tukaram D

    2011-03-01

    The present study examined the effects of plant growth hormones, incubation period, biotic (Trametes versicolor, Mucor sp., Penicillium notatum, Rhizopus stolonifer, and Fusarium oxysporum) and abiotic (NaCl, MgSO(4), FeSO(4), ZnSO(4), and FeCl(3)) elicitors on cell growth and α-tocopherol and pigment (red and yellow) productions in Carthamus tinctorius cell cultures. The cell growth and α-tocopherol and pigment contents improved significantly on Murashige and Skoog (MS) liquid medium containing 50.0 μM α-naphthalene acetic acid (NAA) and 2.5 μM 6-Benzyladenine (BA) at 28 days of incubation period. Incorporation of T. versicolor (50 mg l(-1)) significantly enhanced the production of α-tocopherol (12.7-fold) and red pigment (4.24-fold). Similarly, supplementation of 30 mg l(-1) T. versicolor (7.54-fold) and 70 mg l(-1) Mucor sp. (7.40-fold) significantly increased the production of yellow pigment. Among abiotic elicitors, NaCl (50-70 mg l(-1)) and MgSO(4) (10-30 mg l(-1)) significantly improved production of α-tocopherol (1.24-fold) and red pigment (20-fold), whereas yellow pigment content increased considerably by all the abiotic elicitor treatments. Taken together, the present study reports improved productions of α-tocopherol and the pigment as a stress response of safflower cell cultures exposed to these elicitors.

  16. The penicillin gene cluster is amplified in tandem repeats linked by conserved hexanucleotide sequences.

    PubMed Central

    Fierro, F; Barredo, J L; Díez, B; Gutierrez, S; Fernández, F J; Martín, J F

    1995-01-01

    The penicillin biosynthetic genes (pcbAB, pcbC, penDE) of Penicillium chrysogenum AS-P-78 were located in a 106.5-kb DNA region that is amplified in tandem repeats (five or six copies) linked by conserved TTTACA sequences. The wild-type strains P. chrysogenum NRRL 1951 and Penicillium notatum ATCC 9478 (Fleming's isolate) contain a single copy of the 106.5-kb region. This region was bordered by the same TTTACA hexanucleotide found between tandem repeats in strain AS-P-78. A penicillin overproducer strain, P. chrysogenum E1, contains a large number of copies in tandem of a 57.9-kb DNA fragment, linked by the same hexanucleotide or its reverse complementary TGTAAA sequence. The deletion mutant P. chrysogenum npe10 showed a deletion of 57.9 kb that corresponds exactly to the DNA fragment that is amplified in E1. The conserved hexanucleotide sequence was reconstituted at the deletion site. The amplification has occurred within a single chromosome (chromosome I). The tandem reiteration and deletion appear to arise by mutation-induced site-specific recombination at the conserved hexanucleotide sequences. Images Fig. 3 PMID:7597101

  17. Aerobiological analysis in a salami factory: a possible case of extrinsic allergic alveolitis by Penicillium camembertii.

    PubMed

    Marchisio, V F; Sulotto, F; Botta, G C; Chiesa, A; Airaudi, D; Anastasi, A

    1999-08-01

    A 39-year-old man was hospitalized with a history of fatigue, dyspnoea and low grade fever which seemed to be related to his working environment. The patient was employed in a salami factory, working near the area where the salami are seasoned with fungal inocula. Chest X-ray showed diffuse initial changes of reticulonodular pattern that disappeared after a brief course of steroids therapy. Precipitating antibodies to Penicillium notatum and Aspergillus fumigatus were found both in plasma and bronchoalveolar lavage fluid. This, together with the finding of a lymphocytic alveolitis with CD4+ depletion and CD8+ increase, suggested the possibility of extrinsic allergic alveolitis of fungal aetiology. Qualitative and quantitative monitoring with an impinger of both the working and outside environment for aerial fungal concentration demonstrated a very high level of contamination (up to 1.14x10(9) fungal propagules m-3 of air) and an inside/outside ratio from 21 to about 2000. Penicillium camembertii was the most common species found in all the indoor sites (60-100% of the fungal load). The patient's BALF and serum both displayed precipitating antibodies to P. camembertii from the powder used for the inoculum and the air samples. These results together with the patient's working history gave some evidence of relationship between the indoor P. camembertii concentration and the patient's symptoms.

  18. Life and the outer planets I. Performance of terrestrial organisms in ammonia-rich systems.

    PubMed

    Siegel, S M

    1977-01-01

    Survival and growth of organisms has been demonstrated at 298 degrees K in NH3 atmospheres, including ammonia-methane mixtures. Included are bacteria such as Clostridium perfringens, Pseudomonas aeruginosa, fungi such as Penicillium notatum and Torula utilis. Although the biological response in onion and other species of Allium is limited to germination, standard metabolic poisons were active even in 15 M aqueous NH3, at 250 degrees K. The most extreme example of compatibility between NH3-rich environments and terrestrial life was the retention of metabolic capabilities by conidia of Penicillium after 6 months at 233 degrees K in a liquid ammonia-glycerol medium. Tritiated thymidine, uridine and amino acids were incorporated by these conidia unless subjected to intense gamma-radiation. Observations spanning the past decade suggest that the analogies between H2O and NH3 as solvent media or -OH and -NH2, as functional groups are probably valid. Chemical-biological evolution similar to early terrestrial evolution could be compatible with chemical conditions presumed to exist on the outer planets and some of their satellites.

  19. Antimicrobial activity of protease inhibitor from leaves of Coccinia grandis (L.) Voigt.

    PubMed

    Satheesh, L Shilpa; Murugan, K

    2011-05-01

    Antimicrobial activity of protease inhibitor isolated from Coccinia grandis (L.) Voigt. has been reported. A 14.3 kDa protease inhibitor (PI) was isolated and purified to homogeneity by ammonium sulfate precipitation (20-85% saturation), sephadex G-75, DEAE sepharose column and trypsin-sepharose affinity chromatography from the leaves of C. grandis. The purity was checked by reverse phase high performance liquid chromatography. PI exhibited marked growth inhibitory effects on colon cell lines in a dose-dependent manner. PI was thermostable and showed antimicrobial activity without hemolytic activity. PI strongly inhibited pathogenic microbial strains, including Staphylococcus aureus, Klebsiella pneumoniae, Proteus vulgaris, Eschershia coli, Bacillus subtilis and pathogenic fungus Candida albicans, Mucor indicus, Penicillium notatum, Aspergillus flavus and Cryptococcus neoformans. Examination by bright field microscopy showed inhibition of mycelial growth and sporulation. Morphologically, PI treated fungus showed a significant shrinkage of hyphal tips. Reduced PI completely lost its activity indicating that disulfide bridge is essential for its protease inhibitory and antifungal activity. Results reported in this study suggested that PI may be an excellent candidate for development of novel oral or other anti-infective agents.

  20. Studies on air-borne fungi at Qena. I. Seasonal fluctuations.

    PubMed

    Moubasher, A H; Abdel-Fattah, H M; Swelim, M A

    1981-01-01

    73 species which belong to 24 genera were collected in 200 and 35 exposures made during the period May 1976-October 1977 at each of two levels (2 m and 20 m). The air-borne fungi showed seasonal periodicities and the highest incidence was recovered in spring and autumn and the least in the summer. Aspergillus was the dominating genus. 17 species were collected at the two levels of which A. niger and A. flavus were the most common. Other common genera were Cladosporium which was represented by C. herbarum, C. cladosporioides, C. sphaerospermum, and C. macrocarpum. 7 species of Curvularia were identified of which C. pallescens was the most frequent at the low and C. spicifera at the high level. Drechslera was represented by 6 species of which D. halodes was the most common at the two levels. Only one Alternaria species, A. alternata was isolated at both levels. 10 Penicillium were recovered, P. notatum was the most frequently one isolated at the two levels. Many fungal spore showers of Cladosporium, Aspergillus, Curvularia, and Alternaria were recorded during the experimental period.

  1. Preliminary investigation on the potential use of two C4 turfgrass species to reduce nutrient release in a Mediterranean drained peatland.

    PubMed

    Giannini, Vittoria; Pistocchi, Chiara; Silvestri, Nicola; Volterrani, Marco; Cantini, Valentina; Bonari, Enrico

    2015-02-01

    This study compared dry matter production, nutrient uptake and tissue nutrient concentration of two C4 turfgrass species (Cynodon dactylon × Cynodon transvaalensis Burtt Davy and Paspalum vaginatum Swartz) supplied with three different nutrient solutions in a sand and peat culture. The 8-week experiment was performed in mesocosms and simulated the conditions of an open-field phyto-treatment system located in a Mediterranean drained peatland (Tuscany, Italy). Peat was collected on the site, and one of the solutions mimicked drainage water flowing into it. Three hypotheses were tested: (i) the species chosen efficiently removed nutrients from both the solution and the substrate; (ii) peat contributed to the nutrient load; and (iii) the species chosen were suitable in the open-field system. Both species adapted well to the experimental conditions and demonstrated considerable ability to remove nutrients. P. vaginatum took up nitrogen more efficiently, mainly in conditions of high nutrient availability. We observed supplementary nutrient uptake by plants in the peat treatment. Performances of the two C4 turfgrasses extrapolated to the field scale seemed effective from a phyto-treatment perspective.

  2. Genetic diversity and genomic resources available for the small millet crops to accelerate a New Green Revolution

    PubMed Central

    Goron, Travis L.; Raizada, Manish N.

    2015-01-01

    Small millets are nutrient-rich food sources traditionally grown and consumed by subsistence farmers in Asia and Africa. They include finger millet (Eleusine coracana), foxtail millet (Setaria italica), kodo millet (Paspalum scrobiculatum), proso millet (Panicum miliaceum), barnyard millet (Echinochloa spp.), and little millet (Panicum sumatrense). Local farmers value the small millets for their nutritional and health benefits, tolerance to extreme stress including drought, and ability to grow under low nutrient input conditions, ideal in an era of climate change and steadily depleting natural resources. Little scientific attention has been paid to these crops, hence they have been termed “orphan cereals.” Despite this challenge, an advantageous quality of the small millets is that they continue to be grown in remote regions of the world which has preserved their biodiversity, providing breeders with unique alleles for crop improvement. The purpose of this review, first, is to highlight the diverse traits of each small millet species that are valued by farmers and consumers which hold potential for selection, improvement or mechanistic study. For each species, the germplasm, genetic and genomic resources available will then be described as potential tools to exploit this biodiversity. The review will conclude with noting current trends and gaps in the literature and make recommendations on how to better preserve and utilize diversity within these species to accelerate a New Green Revolution for subsistence farmers in Asia and Africa. PMID:25852710

  3. Mercury speciation, distribution, and bioaccumulation in a river catchment impacted by compact fluorescent lamp manufactures.

    PubMed

    Liang, Peng; Feng, Xinbin; You, Qiongzhi; Zhang, Jin; Cao, Yucheng; Leung, Anna Oi Wah; Wu, Shengchun

    2016-06-01

    The influence from the manufacturing of compact fluorescent lamps (CFL) on mercury (Hg) speciation and distribution in river catchments nearby a typical CFL manufacturing area in China was investigated. Water, sediment, river snail (Procambarus clarkii), and macrophyte (Paspalum distichum L.) samples were collected. Total Hg (THg) and methylmercury (MeHg) concentrations in water ranged from 1.06 to 268 ng · L(-1) and N.D. -2.14 ng · L(-1), respectively. MeHg was significantly positively correlated with THg in water. THg and MeHg in sediment ranged from 15.0 to 2480 and 0.06 to 1.85 ng · g(-1), respectively. River snail samples exhibited high concentrations of THg (206-1437 ng · g(-1)) and MeHg (31.4-404 ng · g(-1)). THg and MeHg concentrations in root of P. distichum L. were significantly higher than those in shoot, indicating that THg and MeHg in the plant were mainly attributed to root assimilation. A very high bioaccumulation factor (20.9 ± 22.1) for MeHg in P. distichum L was noted, suggesting that P. distichum L. might have a potential role in phytoremediating MeHg contaminated soil due to its abnormal uptake capacity to MeHg.

  4. The role of drought- and disturbance-mediated competition in shaping community responses to varied environments.

    PubMed

    Napier, Joseph D; Mordecai, Erin A; Heckman, Robert W

    2016-06-01

    By altering the strength of intra- and interspecific competition, droughts may reshape plant communities. Furthermore, species may respond differently to drought when other influences, such as herbivory, are considered. To explore this relationship, we conducted a greenhouse experiment measuring responses to inter- and intraspecific competition for two grasses, Schedonorus arundinaceus and Paspalum dilatatum, while varying water availability and simulating herbivory via clipping. We then parameterized population growth models to examine the long-term outcome of competition under these conditions. Under drought, S. arundinaceus was less water stressed than P. dilatatum, which exhibited severe water stress; clipping alleviated this stress, increasing the competitive ability of P. dilatatum relative to S. arundinaceus. Although P. dilatatum competed weakly under drought, clipping reduced water stress in P. dilatatum, thereby enhancing its ability to compete with S. arundinaceus under drought. Supporting these observations, population growth models predicted that P. dilatatum would exclude S. arundinaceus when clipped under drought, while S. arundinaceus would exclude P. dilatatum when unclipped under drought. When the modeled environment varied temporally, environmental variation promoted niche differences that, though insufficient to maintain stable coexistence, prevented unconditional competitive exclusion by promoting priority effects. Our results suggest that it is important to consider how species respond not just to stable, but also to variable, environments. When species differ in their responses to drought, competition, and simulated herbivory, stable environments may promote competitive exclusion, while fluctuating environments may promote coexistence. These interactions are critical to understanding how species will respond to global change.

  5. The concentrations of five heavy metals in components of an economically important urban coastal wetland in Ghana: public health and phytoremediation implications.

    PubMed

    Gbogbo, Francis; Otoo, Samuel D

    2015-10-01

    Sakumo II is an urban wetland and a receptacle for domestic and industrial wastes from two cities in Ghana. It however supports viable populations of fish and crabs, is cultivated for food crops and grazed by farm animals. Components of the wetland can therefore accumulate pollutants, but the public health and phytoremediation implications of this are yet to be evaluated. We analysed Cd, As, Hg, Cu and Pb in the lagoon water, sediment, green algae, eight species of aquatic macrophytes, seven species of arthropods and one species of fish. The concentrations of Pb were generally below detection limit whilst Cu was detected only in the lagoon water and Pheropsophus vertialis. Cadmium ranged from 21 ± 4 ppb in algae to 69 ± 12 ppb in Typha domingensis and was generally higher than As and Hg. The highest concentration of As was 11.7 ± 2.1 ppb in Pistia stratiotes whilst Hg was highest in lagoon water (4 ± 2 ppb). The Cd concentrations generally, and Hg concentrations in macrophytes, were higher than US EPA guidelines indicating the wetland's resources were unsafe for regular consumption. Among the emergent aquatic macrophytes, T. domingensis, Ludwigia sp. and Paspalum vaginatum, respectively, had the highest accumulation capacity for Cd, As and Hg, but the floating aquatic plant P. stratiotes appeared to be a better accumulator of Cd and As.

  6. Feeding habits of coypu in the wetlands of the Southern region of Brazil.

    PubMed

    Colares, Ioni G; Oliveira, Raquel N V; Liveira, Rafael M; Colares, Elton P

    2010-09-01

    The aim of this study was to determine the diet of coypu (Myocastor coypus) in two areas (Santa Isabel do Sul wetlands - Area 1, and Santa Marta Farm - Area 2) in the Southern region of Brazil, using microhistological analyses of feces. Twenty-four plant species were identified from collected feces samples. Among the identified species, nine are common in the animals' diet in both areas; the presence of Oriza sativa was not detected in any of the samples. Among the identified species, 84% and 54% of the coypu's diet from Areas 1 and 2, respectively, are aquatic plants. Poaceae family was most common, being found in 82% of the samples from both areas. Paspalum disthichum (Area 1) and Panicum tricholaenoides (Area 2) were the most frequent species on the coypu's diet. The diet comparison for both areas indicates that feeding habits vary depending on the type of habitat, environmental conditions and food availability. The absence of rice in our analysis may be an indication for the preservation of native areas around watercourses, so as to prevent coypu from invading irrigated crops.

  7. Full Genome Sequence Analysis of Two Isolates Reveals a Novel Xanthomonas Species Close to the Sugarcane Pathogen Xanthomonas albilineans

    PubMed Central

    Pieretti, Isabelle; Cociancich, Stéphane; Bolot, Stéphanie; Carrère, Sébastien; Morisset, Alexandre; Rott, Philippe; Royer, Monique

    2015-01-01

    Xanthomonas albilineans is the bacterium responsible for leaf scald, a lethal disease of sugarcane. Within the Xanthomonas genus, X. albilineans exhibits distinctive genomic characteristics including the presence of significant genome erosion, a non-ribosomal peptide synthesis (NRPS) locus involved in albicidin biosynthesis, and a type 3 secretion system (T3SS) of the Salmonella pathogenicity island-1 (SPI-1) family. We sequenced two X. albilineans-like strains isolated from unusual environments, i.e., from dew droplets on sugarcane leaves and from the wild grass Paspalum dilatatum, and compared these genomes sequences with those of two strains of X. albilineans and three of Xanthomonas sacchari. Average nucleotide identity (ANI) and multi-locus sequence analysis (MLSA) showed that both X. albilineans-like strains belong to a new species close to X. albilineans that we have named “Xanthomonas pseudalbilineans”. X. albilineans and “X. pseudalbilineans” share many genomic features including (i) the lack of genes encoding a hypersensitive response and pathogenicity type 3 secretion system (Hrp-T3SS), and (ii) genome erosion that probably occurred in a common progenitor of both species. Our comparative analyses also revealed specific genomic features that may help X. albilineans interact with sugarcane, e.g., a PglA endoglucanase, three TonB-dependent transporters and a glycogen metabolism gene cluster. Other specific genomic features found in the “X. pseudalbilineans” genome may contribute to its fitness and specific ecological niche. PMID:26213974

  8. Differences in photosynthetic syndromes of four halophytic marsh grasses in Pakistan.

    PubMed

    Moinuddin, Muhammad; Gulzar, Salman; Hameed, Abdul; Gul, Bilquees; Ajmal Khan, M; Edwards, Gerald E

    2017-01-01

    Salt-tolerant grasses of warm sub-tropical ecosystems differ in their distribution patterns with respect to salinity and moisture regimes. Experiments were conducted on CO2 fixation and light harvesting processes of four halophytic C4 grasses grown under different levels of salinity (0, 200 and 400 mM NaCl) under ambient environmental conditions. Two species were from a high saline coastal marsh (Aeluropus lagopoides and Sporobolus tremulus) and two were from a moderate saline sub-coastal draw-down tidal marsh (Paspalum paspalodes and Paspalidium geminatum). Analyses of the carbon isotope ratios of leaf biomass in plants indicated that carbon assimilation was occurring by C4 photosynthesis in all species during growth under varying levels of salinity. In the coastal species, with increasing salinity, there was a parallel decrease in rates of CO2 fixation (A), transpiration (E) and stomatal conductance (g s), with no effect on water use efficiency (WUE). These species were adapted for photoprotection by an increase in the Mehler reaction with an increase in activity of PSII/CO2 fixed accompanied by high levels of antioxidant enzymes, superoxide dismutase and ascorbate peroxidase. The sub-coastal species P. paspalodes and P. geminatum had high levels of carotenoid pigments and non-photochemical quenching by the xanthophyll cycle.

  9. Seasonal infestations of two stem borers (Lepidoptera: Crambidae) in noncrop grasses of Gulf Coast rice agroecosystems.

    PubMed

    Beuzelin, J M; Mészáros, A; Reagan, T E; Wilson, L T; Way, M O; Blouin, D C; Showler, A T

    2011-10-01

    Infestations of two stem borers, Eoreuma loftini (Dyar) and Diatraea saccharalis (F.) (Lepidoptera: Crambidae), were compared in noncrop grasses adjacent to rice (Oryza sativa L.) fields. Three farms in the Texas rice Gulf Coast production area were surveyed every 6-8 wk between 2007 and 2009 using quadrat sampling along transects. Although D. saccharalis densities were relatively low, E. loftini average densities ranged from 0.3 to 5.7 immatures per m(2) throughout the 2-yr period. Early annual grasses including ryegrass, Lolium spp., and brome, Bromus spp., were infested during the spring, whereas the perennial johnsongrass, Sorghum halepense (L.) Pers., and Vasey's grass, Paspalum urvillei Steud., were infested throughout the year. Johnsongrass was the most prevalent host (41-78% relative abundance), but Vasey's grass (13-40% relative abundance) harbored as much as 62% of the recovered E. loftini immatures (during the winter). Young rice in newly planted fields did not host stem borers before June. April sampling in fallow rice fields showed that any available live grass material, volunteer rice or weed, can serve as a host during the spring. Our study suggests that noncrop grasses are year-round sources of E. loftini in Texas rice agroecosystems and may increase pest populations.

  10. [Effects of soil factors on vegetation community structure in an abandoned subtropical paddy wetland].

    PubMed

    Peng, Yi; Li, Yu-Yuan; Li, Zhong-Wu; Ye, Fang-Yi; Pan, Chun-Xiang; Xie, Xiao-Li

    2009-07-01

    Based on the investigation data from a subtropical wetland having been abandoned from paddy agriculture for one year, a redundancy analysis was conducted on the relationships between vegetation community and soil factors in the wetland. It was found that soil moisture regime, available K and P, and pH were the main factors affecting the distribution of plant species. The common plant species could be classified into three groups, i. e., Ludwigia prostrata - Murdannia triquetra group (G1), Hemarthria altissima - Rotala rotundifolia - Lapsana apogonoides group (G2), and Conyza canadensis - Polygonum hydropiper - Paspalum pasaloides group (G3). G1 mainly distributed on the soils with higher available K, G2 mainly distributed in periodically flooded area, while G3 mainly distributed in drainage area and was positively correlated to soil available P and pH. Species diversity and above-ground biomass had significant positive correlations with soil pH and total K, respectively, while evenness index was significantly negatively correlated with soil available N. No significant correlations were observed among other indices.

  11. Disturbance governs dominance of an invasive forb in a temporary wetland.

    PubMed

    Price, J N; Berney, P J; Ryder, D; Whalley, R D B; Gross, C L

    2011-11-01

    Dominance of invasive species is often assumed to be due to a superior ability to acquire resources. However, dominance in plant communities can arise through multiple interacting mechanisms, including disturbance. Inter-specific competition can be strongly affected by abiotic conditions, which can determine the outcome of competitive interactions. We evaluated competition and disturbance as mechanisms governing dominance of Phyla canescens (hereafter lippia), an invasive perennial forb from South America, in Paspalum distichum (perennial grass, hereafter water couch) meadows in floodplain wetlands of eastern Australia. Water couch meadows (in the study area) are listed under the Ramsar Convention due to their significance as habitat for migratory waterbirds. In the field, we monitored patterns of vegetation boundaries between the two species in response to flooding. Under controlled glasshouse conditions, we explored competitive interactions between the native water couch and lippia subject to different soil moisture/inundation regimes. We did this using a pairwise factorial glasshouse experiment that manipulated neighbor density (9 treatments) and soil moisture/inundation (4 treatments). In the field trial, inundation increased the cover of water couch. Under more controlled conditions, the invader had a competitive effect on the native species only under dry soil conditions, and was strongly inhibited by inundation. This suggests that dry conditions favor the growth of the invader and wetter (more historical) conditions favor the native grass. In this system, invader dominance is governed by altered disturbance regimes which give the invader a competitive advantage over the native species.

  12. Genetic diversity and genomic resources available for the small millet crops to accelerate a New Green Revolution.

    PubMed

    Goron, Travis L; Raizada, Manish N

    2015-01-01

    Small millets are nutrient-rich food sources traditionally grown and consumed by subsistence farmers in Asia and Africa. They include finger millet (Eleusine coracana), foxtail millet (Setaria italica), kodo millet (Paspalum scrobiculatum), proso millet (Panicum miliaceum), barnyard millet (Echinochloa spp.), and little millet (Panicum sumatrense). Local farmers value the small millets for their nutritional and health benefits, tolerance to extreme stress including drought, and ability to grow under low nutrient input conditions, ideal in an era of climate change and steadily depleting natural resources. Little scientific attention has been paid to these crops, hence they have been termed "orphan cereals." Despite this challenge, an advantageous quality of the small millets is that they continue to be grown in remote regions of the world which has preserved their biodiversity, providing breeders with unique alleles for crop improvement. The purpose of this review, first, is to highlight the diverse traits of each small millet species that are valued by farmers and consumers which hold potential for selection, improvement or mechanistic study. For each species, the germplasm, genetic and genomic resources available will then be described as potential tools to exploit this biodiversity. The review will conclude with noting current trends and gaps in the literature and make recommendations on how to better preserve and utilize diversity within these species to accelerate a New Green Revolution for subsistence farmers in Asia and Africa.

  13. Mycotoxicoses of ruminants and horses.

    PubMed

    Riet-Correa, Franklin; Rivero, Rodolfo; Odriozola, Ernesto; Adrien, Maria de Lourdes; Medeiros, Rosane M T; Schild, Ana Lucia

    2013-11-01

    In the current study, mycotoxicoses of ruminants and horses are reviewed, with an emphasis on the occurrence of these diseases in South America. The main mycotoxicoses observed in grazing cattle include intoxications by indole-diterpenoid mycotoxins (Paspalum spp. contaminated by Claviceps paspali, Lolium perenne infected by Neotyphodium lolii, Cynodon dactylon infected by Claviceps cynodontis, and Poa huecu), gangrenous ergotism and dysthermic syndrome (hyperthermia) caused by Festuca arundinacea (syn. Festuca elatior) infected by Neotyphodium coenophialum (syn. Acremonium coenophialum), and photosensitization in pastures contaminated by toxigenic Pithomyces chartarum. Other mycotoxicoses in grazing cattle include slaframine toxicity in clover pastures infected by Rhizoctonia leguminicola and diplodiosis in cattle grazing in corn stubbles. The mycotoxicoses caused by contaminated concentrated food or byproducts in cattle include poisoning by toxins of Aspergillus clavatus, which contaminate barley or sugar beetroot by-products, gangrenous ergotism or dysthermic syndrome caused by wheat bran or wheat screenings contaminated with Claviceps purpurea, and acute respiratory distress caused by damaged sweet potatoes (Ipomoea batatas). The main mycotoxicosis of horses is leukoencephalomalacia caused by the fumonisins B1 and B2 produced by Fusarium spp. Poisoning by C. purpurea and F. elatior infected by N. coenophialum has also been reported as a cause of agalactia and neonatal mortality in mares. Slaframine toxicosis caused by the ingestion of alfalfa hay contaminated by R. leguminicola has also been reported in horses.

  14. Metal concentrations and mycorrhizal status of plants colonizing copper mine tailings: potential for revegetation.

    PubMed

    Chen, Baodong; Tang, Xiangyu; Zhu, Yongguan; Christie, Peter

    2005-05-01

    A field survey of metal concentrations and mycorrhizal status of plants growing on copper mine tailings was conducted in Anhui Province, China. Available phosphorus and organic matter in the tailings were very low. High concentrations of Pb, Zn, As and Cd as well as Cu were observed on some sites. The dominant plants growing on mine tailings belonged to the families Gramineae and Compositae, and the most widely distributed plant species were Imperata cylindrica, Cynodon dactylon and Paspalum distichum. Coreopsis drummondii also grew well on the arid sites but not on wet sites. Very low or zero arbuscular mycorrhizal (AM) fungal colonization was observed in most of the plants, but extensive mycorrhizal colonization was recorded in the roots of C. drummondii and C. dactylon. Metal concentrations in plant tissues indicated that I. cylindrica and P. distichum utilized avoidance mechanisms to survive at high metal concentrations. The investigation suggests that remediation and revegetation of heavy metal contaminated sites might be facilitated by selection of tolerant plant species. Isolation of tolerant AM fungi may also be warranted.

  15. Allergens of the entomopathogenic fungus Beauveria bassiana.

    PubMed

    Westwood, Greg S; Huang, Shih-Wen; Keyhani, Nemat O

    2005-01-11

    BACKGROUND: Beauveria bassiana is an important entomopathogenic fungus currently under development as a bio-control agent for a variety of insect pests. Although reported to be non-toxic to vertebrates, the potential allergenicity of Beauveria species has not been widely studied. METHODS: IgE-reactivity studies were performed using sera from patients displaying mould hypersensitivity by immunoblot and immunoblot inhibition. Skin reactivity to B. bassiana extracts was measured using intradermal skin testing. RESULTS: Immunoblots of fungal extracts with pooled as well as individual sera showed a distribution of IgE reactive proteins present in B. bassiana crude extracts. Proteinase K digestion of extracts resulted in loss of IgE reactive epitopes, whereas EndoH and PNGaseF (glycosidase) treatments resulted in minor changes in IgE reactive banding patterns as determined by Western blots. Immunoblot inhibitions experiments showed complete loss of IgE-binding using self protein, and partial inhibition using extracts from common allergenic fungi including; Alternaria alternata, Aspergillus fumigatus, Cladosporium herbarum, Candida albicans, Epicoccum purpurascens, and Penicillium notatum. Several proteins including a strongly reactive band with an approximate molecular mass of 35 kDa was uninhibited by any of the tested extracts, and may represent B. bassiana specific allergens. Intradermal skin testing confirmed the in vitro results, demonstrating allergenic reactions in a number of individuals, including those who have had occupational exposure to B. bassiana. CONCLUSIONS: Beauveria bassiana possesses numerous IgE reactive proteins, some of which are cross-reactive among allergens from other fungi. A strongly reactive potential B. bassiana specific allergen (35 kDa) was identified. Intradermal skin testing confirmed the allergenic potential of B. bassiana.

  16. The antifungal, cytotoxic, antitermite and insecticidal activities of Zizyphus jujube.

    PubMed

    Ahmad, Bashir; Khan, Ibrar; Bashir, Shumaila; Azam, Sadiq; Ali, Niaz

    2011-10-01

    Plants are very useful, self-generating machines, producing a variety of useful bioactive products. Keeping in view this idea, the crude methanolic extract and various fractions of Zizyphus jujuba were screened for antifungal, cytotoxic, antitermite and insecticidal activities. Low activity was shown by the crude methanolic extract (12%), n-hexane (9%), chloroform (20%) and ethyl acetate (14%) fraction against Penicillium notatum. Low activity was shown by the n-hexane fraction against Aspergillus niger (10%) and Trichoderma harzianum (13%) and inactive against Aspergillus flavus, Fusarium oxysporum and Rhizopus stolonifer. The CHCl(3) fraction exhibited low activity of 10% against F. oxysporum while showing no activity against the rest of the test fungi. All the test samples were inactive against Rhizopus stolonifer. The crude methanolic extract was highly cytotoxic (73.33%) at the concentration of 1000 (µg/ml) while the rest of the test samples were low in toxicity at the same concentration. The crude methanolic extract of Zizyphus jujuba showed significant antitermite activity against Heterotermes indicola, among the test samples. Against Tribolium castaneum, Rhizopertha dominica and Callosbruchus analis the insecticidal activity was determined. All the test samples except n-hexane showed low activity (20%) against T. castaneum. The n-hexane fraction showed low activity (20%) against R. dominica while the rest of the fractions were inactive against it. Low activity of 40% and 20% was shown by the chloroform and n-hexane fraction respectively against C. analis. The results of the present study revealed that the plant could be as potent source of cytotoxic drugs.

  17. Survey, purification, and properties of sugar phosphate phosphohydrolase among microorganisms.

    PubMed

    Choy, F Y; Lee, Y P

    1983-12-01

    Sugar phosphate phosphohydrolase was purified approximately 500- to 600-fold to apparent homogeneity from Escherichia coli B, Escherichia coli C, Escherichia coli var. communior, Escherichia acidilactici, Enterobacter aerogenes, Neisseria meningitidis, and Saccharomyces cereviseae. The molecular weights of the enzyme as estimated by gel filtration ranged from 97 X 10(3) to 101 X 10(3). The enzyme was composed of two subunits with the same molecular weight which ranged from 50 X 10(3) to 52 X 10(3), as determined by sodium dodecyl sulfate gel electrophoresis. Homogeneous enzyme preparations hydrolyse all the tested alpha-D-aldohexose 1-phosphate, D-(keto or aldo)hexose 6-phosphate, and pentose phosphate substrates significantly. When the microorganisms were transferred from growth medium with 1% glucose to that without glucose, there were dramatic increases in both the specific and total enzyme activities. At least three isozymes appeared to be present in S. cereviseae, and two appeared to be present in E. coli B, E. coli var. communior, and N. meningitidis. Rabbit antiserum immunized against sugar phosphate phosphohydrolase purified from E. coli B cross-reacted with both the crude extracts and purified preparations of the enzyme from the other microorganisms. The presence of neither sugar phosphate phosphohydrolase activity nor immunocrossreacting material was detected in the following microorganisms: Aspergillus niger, Azotobacter chroococcum, Bacillus subtilis, Bacillus pumilis, Citrobacter freundii, Clostridium butyricum, Corynebacterium xerosis, Flavobacterium aquatile, Flavobacterium synxanthum, Lactobacillus bulgaricus, Micrococcus coralinus, Neisseria perflava, Neurospora crassa, Penicilium expansum, Penicilium notatum, Proteus mirabilis, Proteus vulgaris, Pseudomonas fluorescens, Saccharomyces fermenti, Sarcina lutea, and Streptomyces antibioticus. At present, no conclusive relationship can be established between the phosphoenolpyruvate phosphotransferase

  18. Screening for new accumulator plants in Andes Range mines

    NASA Astrophysics Data System (ADS)

    Bech, Jaume; Roca, Núria

    2016-04-01

    Toxic metal pollution of waters and soils is a major environmental problem, and most conventional remediation approaches do not provide acceptable solutions. The use of plants or plant products to restore or stabilize contaminated sites, collectively known as phytoremediation, takes advantage of the natural abilities of plants to take up, accumulate, store, or degrade organic and inorganic substances. Although not a new concept, phytoremediation is currently being re-examined as an environmentally friendly, cost-effective means of reducing metal contaminated soil. Plants growing on naturally metal-enriched soils are of particular interest in this regard, since they are genetically tolerant to high metal concentrations and have an excellent adaptation to this multi-stress environment. Processes include using plants that tolerate and accumulate metals at high levels (phytoextraction) and using plants that can grow under conditions that are toxic to other plants while preventing, for example, soil erosion (phytostabilization). Soil and plant samples were taken at polymetallic mines in Peru, Ecuador and Chile. It is suggested that Plantago orbignyana Steinheil is a Pb hyperaccumulator. Moreover, unusually elevated concentrations of Pb (over 1000 mg kg-1) and Translocation Factor (TF) greater than one were also detected in shoots of 6 different plants species (Ageratina sp., Achirodine alata, Cortaderia apalothica, Epilobium denticulatum, Taraxacum officinalis and Trifolium repens) of a Caroline mine in Perú. Among the grass species (Poaceae), the highest shoot As concentration were found in Paspalum sp. (>1000 μg g-1) and Eriochola ramose (460 μg g-1) from the Cu mine in Peru and in Holcus lanatus and Pennisetum clandestinum (>200 μg g-1) from the silver mine in Ecuador. The shoot accumulation of Zn was highest in Baccharis amdatensis (>1900 μg g-1) and in Rumex crispus (1300 μg g-1) from the Ag mine in Ecuador (Bech et al., 2002). Paspalum racemosum also

  19. Community of arbuscular mycorrhizal fungi in a coastal vegetation on Okinawa island and effect of the isolated fungi on growth of sorghum under salt-treated conditions.

    PubMed

    Yamato, Masahide; Ikeda, Shiho; Iwase, Koji

    2008-07-01

    Community of arbuscular mycorrhizal (AM) fungi in a coastal vegetation on Okinawa island in Japan was examined. A sampling plot was established in a colony of Ipomoea pes-caprae (Convolvulaceae) on the beach in Tamagusuku, Okinawa Pref, in which eight root samples of I. pes-caprae and three root samples each of Vigna marina (Leguminosae) and Paspalum distichum (Poaceae) were collected. Partial 18S rDNA of AM fungi was amplified from the root samples by polymerase chain reaction (PCR) with primers NS31 and AM1. Restriction fragment length polymorphism analysis with HinfI and RsaI for cloned PCR products revealed that two types of Glomus sp., type A and type B, were dominant in the colony. Among them, the fungi of type A were especially dominant near the edge of the colony facing the sea. A phylogenetic analysis showed that the AM fungi of type B are closely related to Glomus intraradices and those of type A are nearly related to type B. From the sequence data, it was also found that type A was further divided into two types, type A1 and A2. One representative strain each of the three types, type A1, A2, and B, propagated from single spore each, was examined for the growth of sorghum (Sorghum bicolor) at three different salinity levels, 0, 100, and 200 mM NaCl. At the non-salt-treated condition, the type B fungus was the most effective on shoot growth enhancement of the host plant, whereas at the salt-treated conditions, the type A2 fungus was the most effective. An efficient suppression of Na + translocation into the shoot by the examined AM fungi was found. These results suggested that the AM fungi dominant near the sea are adapted to salt-stressed environment to alleviate the salt stress of host plants.

  20. Prevalence and risk factors associated with gastrointestinal nematode infection in goats raised in Baybay city, Leyte, Philippines

    PubMed Central

    Rupa, Ariel Paul M.; Portugaliza, Harvie P.

    2016-01-01

    Aim: Gastrointestinal parasitism is a serious constraint affecting goat production in the Philippines. This study aimed to determine the prevalence and associated risk factors of gastrointestinal nematode infection in goat-populated barangays of Baybay City, Leyte. Materials and Methods: A total of 81 households or farms were interviewed, and 450 goats were sampled for fecalysis. Fecal egg count along with egg morphological identification and coproculture for third stage larvae identification were conducted. Descriptive statistics and logistic regression analyses were carried out to determine the farm- and animal-level prevalence and risk factors. Results: Fecalysis revealed the presence of strongyle and Trichuris spp. with a farm-level prevalence of 100% and 4.94%, respectively; and animal-level prevalence of 96.22% and 4.44%, respectively. The identified strongyle genera per barangay were Haemonchus spp. (34.79%), Trichostrongylus spp. (33.29%), Oesophagostomum spp. (24.21%), Cooperia spp. (6.93%), and Chabertia spp. (0.79%). Goats older than 12 months were four times more likely to present high strongyle burden when compared to goats <6 months. With each month increase in goat’s age, the odds of acquiring strongyle infection also increased by 1.07 times. Animals kept in goat house with cemented flooring have lower odds of acquiring strongyle (odds ratio=0.12). Goats raised for leisure purposes and fed with carabao grass (Paspalum conjugatum) were 8.12 and 5.52 times more likely to acquire Trichuris, respectively. Conclusion: Most of the backyard goat raisers in Baybay City, Leyte, do not practice sound helminth control measures as shown by the high prevalence of gastrointestinal nematodes. The most relevant risk factors for gastrointestinal nematode infection were the age of the goat, type of goat house’s flooring, purpose of raising goats, and feeding practices. PMID:27536034

  1. Restoring biodiversity in the Gwydir Wetlands through environmental flows.

    PubMed

    Mawhinney, W A

    2003-01-01

    As part of the Water Reforms process, environmental flow rules have been progressively implemented in New South Wales rivers. The Integrated Monitoring of Environmental Flows (IMEF) is a major project established to better understand how rivers and associated wetlands respond to environmental water allocations. The results presented here represent the vegetation data collected for the testing of the hypothesis that "protecting or restoring a portion of freshes and high flows and otherwise maintaining natural flow variability will replenish anabranches and riverine wetlands, restoring their biodiversity". The study site is the Ramsar listed Gwydir Wetlands, located on the Gingham and Gwydir (Big Leather) Watercourses in the Lower Gwydir Valley, 100 km west of Moree. The expansion of irrigated agriculture in the lower Gwydir valley has severely altered flow regimes in the wetlands. The spread of the weed Phyla canescens (Lippia) is of major concern to landholders in the Gwydir Wetlands. Results indicate that Paspalum distichum (Water couch) and Eleocharis plana (Ribbed spike-rush) can maintain dominance over Phyla canescens if flooding occurs on a semi-regular basis. Conversely, Eichhornia crassipes (Water hyacinth) is a rampant noxious weed of open water in the Gwydir Wetlands, and has quickly spread in areas that are inundated for long periods. Management of this weed requires periodic drying of the wetlands to cause desiccation and death of the plants. The flooding requirement of individual species and plant associations in the Gwydir Wetlands are currently not fully understood. By providing better information on the consequence of different flows, the IMEF project will help to develop better management strategies to shift the dominance from introduced species such as P. canescens and E. crassipes to more desirable native plant species.

  2. Phytoremediation potential of weeds in heavy metal contaminated soils of the Bassa Industrial Zone of Douala, Cameroon.

    PubMed

    Lum, A Fontem; Ngwa, E S A; Chikoye, D; Suh, C E

    2014-01-01

    Phytoremediation is a promising option for reclaiming soils contaminated with toxic metals, using plants with high potentials for extraction, stabilization and hyperaccumulation. This study was conducted in Cameroon, at the Bassa Industrial Zone of Douala in 2011, to assess the total content of 19 heavy metals and 5 other elements in soils and phytoremediation potential of 12 weeds. Partial extraction was carried out in soil, plant root and shoot samples. Phytoremediation potential was evaluated in terms of the Biological Concentration Factor, Translocation Factor and Biological Accumulation Coefficient. The detectable content of the heavy metals in soils was Cu:70-179, Pb:8-130, Zn:200-971, Ni:74-296, Co:31-90, Mn:1983-4139, V:165-383, Cr:42-1054, Ba:26-239, Sc:21-56, Al:6.11-9.84, Th:7-22, Sr:30-190, La:52-115, Zr:111-341, Y:10-49, Nb:90-172 in mg kg(-1), and Ti:2.73-4.09 and Fe:12-16.24 in wt%. The contamination index revealed that the soils were slightly to heavily contaminated while the geoaccumulation index showed that the soils ranged from unpolluted to highly polluted. The concentration of heavy metals was ranked as Zn > Ni > Cu > V > Mn > Sc > Co > Pb and Cr in the roots and Mn > Zn > Ni > Cu > Sc > Co > V > Pb > Cr > Fe in the shoots. Dissotis rotundifolia and Kyllinga erecta had phytoextraction potentials for Pb and Paspalum orbicularefor Fe. Eleusine indica and K. erecta had phytostabilisation potential for soils contaminated with Cu and Pb, respectively.

  3. [Eco-hydrological characteristics and soil and water conservation effect of citrus plantation on slope red soil of Jiangxi Province, China].

    PubMed

    Yang, Jie; Guo, Xiao-Min; Song, Yue-Jun; Xiao, Sheng-Sheng; Niu, De-Kui

    2012-02-01

    A 9-year observation was conducted at the experimental plots in the Citrus reticulata plantation in Jiangxi Provincial Eco-Technology Park to study the eco-hydrological characteristics and soil conservation benefits of the plantation on slope red soil. Seven treatments were designed and monitored over nine years. The average flow and the rate of sediment for the seven treatments were reduced by 78.5% and 77.2%, respectively. The reduction rates were the highest in treatments band coverage of Paspalum natatu, whole coverage of P. natatu, and level terrace with grass on ridge, with the values of 94.8%, 94.3% and 92.5%, respectively, followed by in treatment intercropping Glycine max (66.0%) and Raphanus sativus (77.5%), with horizontal planting being better than vertical planting, and the lowest in treatment without understory vegetation (33.1%). The observations on the precipitation redistribution of 43 rainfall events with a mean precipitation of 20.07 mm in 2009-2010 showed that the throughfall, stemflow, and canopy interception were 9.15, 4.72 and 6.20 mm, accounting for 44.7%, 25.7% and 29.6% of the precipitation, respectively. The throughfall and stemflow tended to increase with increasing precipitation. There was a significant liner negative correlation between the canopy interception rate and the precipitation when the rainfall was less than 10 mm, but no significant correlation when the rainfall was greater than 10 mm. The water holding rate of C. reticulata litters was logarithmically correlated with water soaking time, and the maximum water holding rate was 326%. It was considered that rational allocation of understory vegetation played an important role in the soil and water conservation of citrus orchard on slope red soil.

  4. Evaluation of local energy sources in milk production in a tropical silvopastoral system with Erythrina poeppigiana.

    PubMed

    Jiménez-Ferrer, Guillermo; Mendoza-Martínez, Germán; Soto-Pinto, Lorena; Alayón-Gamboa, Armando

    2015-06-01

    An experiment was carried out to determine the effect of four local energy sources (sorghum grain, green banana, polished rice, and sugarcane molasses) fed to dairy cows on intake, milk production and composition, and economic viability in a silvopastoral system in Costa Rica (Turrialba). Twelve grazing cows (Jersey × Central American Milking Creole), with a mean live weight of 332 kg (SD 34), were supplemented with 0.5 kg of dry matter (DM)/100 kg/LW of Erythrina porppigiana fresh foliage daily. Experimental design was a replicated change-over 4 × 4 Latin Square. The pasture composition was 11 and 17 % of star grass (Cynodon niemfuensis), 32 and 28 % of ruzzi grass (Brachiaria rusisiensis), and 45 and 42 % of natural grasses (Axonopus compresus and Paspalum conjugatum) at initial and final times of the essay, respectively. The grass allowance was 30.14 DM/cow/day. Significant differences were found among treatments for variable milk fat content (P < 0.05). Sorghum presented the highest (41.2 g/kg milk) content of milk fat, followed by green banana (39.2 g/kg milk), polished rice (38.3 g/kg milk) and molasses (38.1 g/kg milk). Non-significant differences (P > 0.05) resulted for total milk production (sorghum 9.0 kg/cow/day; green banana 8.9 kg/cow/day; polished rice 8.8 kg/cow/day; molasses 8.6 kg/cow/day) and fat-corrected milk (FCM). The financial analysis showed that all treatments were economically viable; however, supplementation with green bananas and molasses were the most favorable due to the low costs incurred.

  5. Unmanned Aerial Vehicle to Estimate Nitrogen Status of Turfgrasses

    PubMed Central

    Corniglia, Matteo; Gaetani, Monica; Grossi, Nicola; Magni, Simone; Migliazzi, Mauro; Angelini, Luciana; Mazzoncini, Marco; Silvestri, Nicola; Fontanelli, Marco; Raffaelli, Michele; Peruzzi, Andrea; Volterrani, Marco

    2016-01-01

    Spectral reflectance data originating from Unmanned Aerial Vehicle (UAV) imagery is a valuable tool to monitor plant nutrition, reduce nitrogen (N) application to real needs, thus producing both economic and environmental benefits. The objectives of the trial were i) to compare the spectral reflectance of 3 turfgrasses acquired via UAV and by a ground-based instrument; ii) to test the sensitivity of the 2 data acquisition sources in detecting induced variation in N levels. N application gradients from 0 to 250 kg ha-1 were created on 3 different turfgrass species: Cynodon dactylon x transvaalensis (Cdxt) ‘Patriot’, Zoysia matrella (Zm) ‘Zeon’ and Paspalum vaginatum (Pv) ‘Salam’. Proximity and remote-sensed reflectance measurements were acquired using a GreenSeeker handheld crop sensor and a UAV with onboard a multispectral sensor, to determine Normalized Difference Vegetation Index (NDVI). Proximity-sensed NDVI is highly correlated with data acquired from UAV with r values ranging from 0.83 (Zm) to 0.97 (Cdxt). Relating NDVI-UAV with clippings N, the highest r is for Cdxt (0.95). The most reactive species to N fertilization is Cdxt with a clippings N% ranging from 1.2% to 4.1%. UAV imagery can adequately assess the N status of turfgrasses and its spatial variability within a species, so for large areas, such as golf courses, sod farms or race courses, UAV acquired data can optimize turf management. For relatively small green areas, a hand-held crop sensor can be a less expensive and more practical option. PMID:27341674

  6. Changes in southern Piedmont grassland community structure and nutritive quality with future climate scenarios of elevated tropospheric ozone and altered rainfall patterns.

    PubMed

    Gilliland, N J; Chappelka, A H; Muntifering, R B; Ditchkoff, S S

    2016-01-01

    Forage species common to the southern USA Piedmont region, Lolium arundinacea, Paspalum dilatatum, Cynodon dactylon and Trifolium repens, were established in a model pasture system to test the future climate change scenario of increasing ozone exposure in combination with varying rainfall amounts on community structure and nutritive quality. Forages were exposed to two levels of ozone [ambient (non-filtered; NF) and twice ambient (2×) concentrations] with three levels of precipitation (average or ±20% of average) in modified open-top chambers (OTCs) from June to September 2009. Dry matter (DM) yield did not differ over the growing season between forage types, except in primary growth grasses where DM yield was higher in 2× than NF treatment. Primary growth clover decreased in nutritive quality in 2× ozone because of increased concentrations of neutral detergent fibre (NDF), acid detergent fibre (ADF) and acid detergent lignin (ADL). Re-growth clover exhibited the largest decrease in nutritive quality, whereas grasses were not adversely affected in 2× ozone. Re-growth grasses responded positively to 2× ozone exposure, as indicated in increased relative food value (RFV) and percentage crude protein (CP) than NF-exposed re-growth grasses. Effects of precipitation were not significant over the growing season for primary or re-growth forage, except in primary growth grasses where DM yield was higher in chambers with above average (+20%) precipitation. Total canopy cover was significantly higher over the growing season in chambers receiving above average precipitation, but no significant effects were observed with ozone. Results indicate shifts in plant community structure and functioning related to mammalian herbivore herbivory in future climate change scenarios.

  7. Unmanned Aerial Vehicle to Estimate Nitrogen Status of Turfgrasses.

    PubMed

    Caturegli, Lisa; Corniglia, Matteo; Gaetani, Monica; Grossi, Nicola; Magni, Simone; Migliazzi, Mauro; Angelini, Luciana; Mazzoncini, Marco; Silvestri, Nicola; Fontanelli, Marco; Raffaelli, Michele; Peruzzi, Andrea; Volterrani, Marco

    2016-01-01

    Spectral reflectance data originating from Unmanned Aerial Vehicle (UAV) imagery is a valuable tool to monitor plant nutrition, reduce nitrogen (N) application to real needs, thus producing both economic and environmental benefits. The objectives of the trial were i) to compare the spectral reflectance of 3 turfgrasses acquired via UAV and by a ground-based instrument; ii) to test the sensitivity of the 2 data acquisition sources in detecting induced variation in N levels. N application gradients from 0 to 250 kg ha-1 were created on 3 different turfgrass species: Cynodon dactylon x transvaalensis (Cdxt) 'Patriot', Zoysia matrella (Zm) 'Zeon' and Paspalum vaginatum (Pv) 'Salam'. Proximity and remote-sensed reflectance measurements were acquired using a GreenSeeker handheld crop sensor and a UAV with onboard a multispectral sensor, to determine Normalized Difference Vegetation Index (NDVI). Proximity-sensed NDVI is highly correlated with data acquired from UAV with r values ranging from 0.83 (Zm) to 0.97 (Cdxt). Relating NDVI-UAV with clippings N, the highest r is for Cdxt (0.95). The most reactive species to N fertilization is Cdxt with a clippings N% ranging from 1.2% to 4.1%. UAV imagery can adequately assess the N status of turfgrasses and its spatial variability within a species, so for large areas, such as golf courses, sod farms or race courses, UAV acquired data can optimize turf management. For relatively small green areas, a hand-held crop sensor can be a less expensive and more practical option.

  8. Excreting and non-excreting grasses exhibit different salt resistance strategies

    PubMed Central

    Moinuddin, Muhammad; Gulzar, Salman; Ahmed, Muhammad Zaheer; Gul, Bilquees; Koyro, Hans-Werner; Khan, Muhammad Ajmal

    2014-01-01

    The combination of traits that makes a plant successful under saline conditions varies with the type of plant and its interaction with the environmental conditions. Knowledge about the contribution of these traits towards salt resistance in grasses has great potential for improving the salt resistance of conventional crops. We attempted to identify differential adaptive response patterns of salt-excreting versus non-excreting grasses. More specifically, we studied the growth, osmotic, ionic and nutrient (carbon/nitrogen) relations of two salt-excreting (Aeluropus lagopoides and Sporobolus tremulus) and two non-excreting (Paspalum paspalodes and Paspalidium geminatum) perennial C4 grasses under non-saline and saline (0, 200 and 400 mM NaCl) conditions. Growth and relative growth rate decreased under saline conditions in the order P. geminatum > S. tremulus = A. lagopoides > P. paspalodes. The root-to-shoot biomass allocation was unaffected in salt-excreting grasses, increased in P. paspalodes but decreased in P. geminatum. Salt-excreting grasses had a higher shoot/root Na+ ratio than non-excreting grasses. K+, Ca2+ and Mg2+ homoeostasis remained undisturbed among test grasses possibly through improved ion selectivity with rising substrate salinity. Salt-excreting grasses increased leaf succulence, decreased ψs and xylem pressure potential, and accumulated proline and glycinebetaine with increasing salinity. Higher salt resistance of P. paspalodes could be attributed to lower Na+ uptake, higher nitrogen-use efficiency and higher water-use efficiency among the test species. However, P. geminatum was unable to cope with salt-induced physiological drought. More information is required to adequately document the differential strategies of salt resistance in salt-excreting and non-excreting grasses. PMID:24996428

  9. Biogeochemistry of the Amazon River Basin: the role of aquatic ecosystems in the Amazon functioning

    NASA Astrophysics Data System (ADS)

    Victoria, R. L.; Ballester, V. R.; Krushe, A. V.; Richey, J. E.; Aufdenkampe, A. K.; Kavaguishi, N. L.; Gomes, B. M.; Victoria, D. D.; Montebello, A. A.; Niell, C.; Deegan, L.

    2004-12-01

    In this study we present the results of an integrated analysis of physical and anthropogenic controls of river biogeochemistry in Amazônia. At the meso-scale level, our results show that both soil properties and land use are the main drivers of river biogeochemistry and metabolism, with pasture cover and soil exchange cation capacity explaining 99% (p < 0.01) of the variability observed in surface water ions and nutrients concentrations. In small rivers, forest clearing can increase cations, P and C inputs. P and light are the main PPL limiting factors in forested streams, while in pasture streams N becomes limiting. P export to streams may increase or remain nearly undetectable after forest-to-pasture conversion, depending on soil type. Pasture streams on Oxisols have very low P export, while on Ultisols P export is increased. Conversions of forest to pasture leads to extensive growth of in channel Paspalum resulting in higher DOC concentrations and respiration rates. Pasture streams have higher DOC fluxes when compared to the forest ones. In pasture areas the soil are compacted, there is less infiltration and higher surface run off, leaching soil superficial layers and caring more DOC to the streams. In forest areas infiltration is deeper into the soils and canopy interaction is higher. Mineralogy and soil properties are key factors determining exports of nutrients to streams. Therefore, land use change effects on nutrient export from terrestrial to aquatic ecosystems and the atmosphere must be understood within the context of varying soil properties across the Amazon Basin.

  10. Emission of methane and carbon dioxide and earthworm survival during composting of pharmaceutical sludge and spent mycelia.

    PubMed

    Majumdar, Deepanjan; Patel, Jigisha; Bhatt, Neha; Desai, Priyanka

    2006-03-01

    Emissions of methane (CH4) and carbon dioxide (CO2) from spent mycelia of the mold Penicilium notatum and sludge from the effluent treatment facility (ETPS) of a pharmaceutical industry were estimated twice during a two-week composting before vermicomposting. These wastes are dumped in landfills or sometimes used in agricultural fields and no reports are available on their greenhouse gas producing potentials. The solid wastes contained appreciable organic carbon and nitrogen while very high Fe, Mn and Zn were found in ETPS only. Pure wastes did not support germination of Vigna radiata L. while mixing soil with ETPS and spent mycelia at the ratios of 12:1 and 14:1 led to 80% and 50% germination, respectively. The wastes were mixed with cowdung at the ratios of 1:1, 1:3 and 3:1 for composting. Carbon dioxide emissions were always significantly higher than CH4 emissions from all the treatments due to prevalence of aerobic condition during composting. From some treatments, CH4 emissions increased with time, indicating increasing activity of anaerobic bacteria in the waste mixtures. Methane emissions ranged from 21.6 to 231.7 microg m(-2) day(-1) while CO2 emissions were greater than thousand times at 39.8-894.8 mg m(-2) day(-1). The amount of C emitted as CH4-C and CO2-C from ranged from 0.007% to 0.081% of total C composted. Cowdung emitted highest CH4 followed by spent mycelia and ETPS while ETPS emitted more CO2 than spent mycelia but lesser than cowdung. Global warming potential of emitted CH4 was found to be in the range of 10.6-27.7 mg-CO2-equivalent on a 20-year time horizon. The results suggest that pharmaceutical wastes can be an important source of CH4 and CO2 during composting or any other stockpiling under suitable moisture conditions. The waste mixtures were found not suitable for vermicomposting after two weeks composting and earthworms did not survive long in the mixtures.

  11. Antifungal and antibacterial activities of Mexican tarragon (Tagetes lucida).

    PubMed

    Céspedes, Carlos L; Avila, J Guillermo; Martínez, Andrés; Serrato, Blanca; Calderón-Mugica, José C; Salgado-Garciglia, Rafael

    2006-05-17

    Mexican tarragon (Tagetes lucida Cv. Asteraceae: Campanulatae) is an important, nutritious plant and an effective herbal medicine. Seven coumarins, 7,8-dihydroxycoumarin (4), umbelliferone (7-hydroxycoumarin) (5), scoparone (6,7-dimethoxycoumarin) (7), esculetin (6,7-dihydroxycoumarin) (11), 6-hydroxy-7-methoxycoumarin (12), herniarin (7-methoxycoumarin) (13), and scopoletin (6-methoxy-7-hydroxycoumarin) (14), and three flavonoids, patuletin (18), quercetin (19), and quercetagetin (20), were isolated from CH2Cl2 and MeOH extracts from aerial parts of T. lucida. In addition, 6,7-diacetoxy coumarin (15), 6-methoxy-7-acetylcoumarin (16), and 6-acetoxy-7-methoxycoumarin (17) derivatives were synthesized. 8-Methoxypsoralen (1), 8-acetyl-7-hydroxycoumarin (2), 7,8-dihydroxy-6-meth-oxycoumarin (3), 6,7-dimethoxy-4-methylcoumarin (6), 5,7-dihydroxy-4-methylcoumarin (8), 4-hydroxycoumarin (9), 4-hydroxy-6,7-dimethylcoumarin (10), naringenin (21), glycoside-7-rhamnonaringin (22), and rutin (23) were commercially obtained (Sigma-Aldrich). All of these compounds and extracts (M1 and M2) were assayed against bacteria and fungi. The antibacterial activity was determined on Bacillus subtilis, Escherichia coli, Proteus mirabilis, Klebsiella pneumoniae, Salmonella typhi, Salmonella sp., Shigella boydii, Shigella sp., Enterobacter aerogenes, Enterobacter agglomerans, Sarcina lutea, Staphylococcus epidermidis, Staphylococcus aureus, Yersinia enterolitica, Vibrio cholerae (three El Tor strains, CDC-V12, clinic case, and INDRE-206, were obtained from contaminated water), and V. cholerae (NO-O1). The evaluated fungi were Aspergillus niger, Penicillium notatum, Fusarium moniliforme, Fusarium sporotrichum, Rhizoctonia solani, and Trichophyton mentagrophytes. The most active compounds against Gram-positive and -negative bacteria were the dihydroxylated coumarins 3 and 4. In addition, 2-4, 6, 7, and 11 showed an interesting activity against V. cholerae, a key bacterium in the contaminated

  12. Performance and economic analyses of year-round forage systems for forage-fed beef production in the Gulf Coast.

    PubMed

    Scaglia, G; Rodriguez, J; Gillespie, J; Bhandari, B; Wang, J J; McMillin, K W

    2014-12-01

    On a global scale, most beef is produced from grazing pastures or rangelands. Certain limitations exist, however, such as not having adequate animal rates of gain for marbling and availability of adequate forage nutritional value and quantity for constant animal weight gains. In the last 20 yr, there has been an increased interest in forage-fed beef for multiple reasons (health related, environmental concerns, and welfare issues). Starting on June 5, 13, 14, and 8 in 4 consecutive yr, 54 steers (initial BW=259±5.6 kg; average of 9 mo of age) were randomly allotted to 3 yr-round forage systems. Each system occupied 6 ha/replicate and had the same stocking rate. System 1 had annual ryegrass (Lolium multiflorum) for winter grazing and bermudagrass (Cynodon dactylon) for summer grazing; while Systems 2 and 3 added rye and a clover mix to the ryegrass and diversified the use of pastures in the fall (dallisgrass [Paspalum dilatatum] and clovers [Trifolium spp.]). System 3 added the use of annual summer forages. During their respective growing season for each forage or forage mix, mass and height did not limit animal performance; however, there was a sampling date effect (P<0.05) for nutritive value variables since it decreased as forages became mature. The ADG observed (0.44 kg) for all systems (P=0.78) during summer was lower than expected and might have been limited by the observed temperature as well as forage nutritive value. Systems 1 and 2 had more grazing days (P=0.03) during summer (155 and 146 d, respectively) compared to System 3 (132 d) due to the greater pasture area of bermudagrass in those systems. Steers in System 3 were fed more hay for a longer period of time (P<0.05) than on the other 2 systems. System 1 and 2 produced more hay per hectare than System 3 (P<0.05). No differences (P>0.05) were detected between systems in ADG year round, during the winter season, or carcass characteristics. Return over total direct costs and total specified expenses were

  13. The first report of Pb and Zn accumulation in some native plants from the Peruvian Andes

    NASA Astrophysics Data System (ADS)

    Bech, Jaume; Duran, Paola; Poma, Wilfredo; Sánchez, Isidoro; Barceló, Juan; Roca, Núria; Boluda, Rafael; Roca-Pérez, Luís.; Poschenrieder, Charlotte

    2010-05-01

    Until recent decades little has been known about the remediation of mining sites using metalophytes in Latin America. Metal mining has helped to create severe and diverse environmental problems. The present study proposed to identify and characterize spontaneously growing heavy metal tolerant plant species in the area around the polimetalic mine in Hualgayoc (Cajamarca, Peru). These species are potentially useful for phytorremediation. Plant and soils from their rhizosphere were sampled and analized for concentration of As, Fe, Mn, Pb and Zn. Translocation Factor (TF) defined the metals concentrations ratio between shoots and root biomass and Shoot Accumulation Factor (SAF) the metal concentration ratio between shoot and soil concentration were determined and used to measure the effectiveness of a plant in concentrating metals into its biomass. The soils were neutral pH (7,4±0,5) with variable content of organic carbon (2,4±1,1) and loam texture: sand (42,9±10,8) and clay (16,7±4,6). According to the total metals, all samples exceeded toxicity thresholds, high Pb (20016 ± 32559 mg•kg-1) and Zn (22512 ± 13056 mg•kg-1) concentrations were detected. High shoot Pb and Zn concentrations were found in Plantaginaceae Plantago orbignyana (6998 and 9617 μg/g); Brassicaceae Lepidium bipinnatifidum (6886 and 5034 mg•kg-1) and Asteraceae Senecio sp (4253 and 3870 mg•kg-1) and Baccharis latifolia (2554 and 1284 mg•kg-1 respectively). The high values of TFs indicates that the plants effectively traslocated metales. Lepidium bipinnatifidum shows the highest TFs values (143 in Pb and 21,5 in Zn). The SAF values were much lower than those reported for other species such as Paspalum sp in the Peruvian copper mine, which may be due to a high top soil Pb and Zn concentrations. These species can surely be considered as interesting for phytoextraction, due not only to its accumulative capacity but also since they showed an elevated transfer factor and grew in the

  14. Mercury net methylation in five tropical flood plain regions of Brazil: high in the root zone of floating macrophyte mats but low in surface sediments and flooded soils.

    PubMed

    Guimarães, J R; Meili, M; Hylander, L D; de Castro e Silva, E; Roulet, M; Mauro, J B; de Lemos, R

    2000-10-16

    In aquatic systems, bottom sediments have often been considered as the main methylmercury (MeHg) production site. In tropical floodplain areas, however, floating meadows and flooded forests extend over large areas and can be important Hg methylating sites. We present here a cross-system comparison of the Hg net methylation capacity in surface sediments, flooded soils and roots of floating aquatic macrophytes, assayed by in situ incubation with 203Hg and extraction of formed Me203 Hg by acid leaching and toluene. The presence of mono-MeHg was confirmed by thin layer chromatography and other techniques. Study areas included floodplain lakes in the Amazon basin (Tapajós, Negro and Amazon rivers), the Pantanal floodplain (Paraguay river basin), freshwater coastal lagoons in Rio de Janeiro and oxbow lakes in the Mogi-Guaçú river, São Paulo state. Different Hg levels were added in assays performed in 1994-1998, but great care was taken to standardise all other test parameters, to allow data comparisons. Net MeHg production was one order of magnitude higher (mean 13.8%, range 0.28-35) in the living or decomposing roots of floating or rooted macrophyte mats (Eichhornia azurea, E. crassipes, Paspalum sp., Eleocharis sellowiana, Salvinia sp., S. rotundifolia and Scirpus cubensis) than in the surface layer of underlying lake sediments (mean 0.6%, range 0.022-2.5). Methylation in flooded soils presented a wide range and was in some cases similar to the one found in macrophyte roots but usually much lower. In a Tapajós floodplain lake, natural concentrations of MeHg in soil and sediment cores taken along a lake-forest transect agreed well with data on net methylation potentials in the same samples. E. azurea, E. crassipes and Salvinia presented the highest methylation potentials, up to 113 times higher than in sediments. Methylation in E. azurea from six lakes of the Paraguay and Cuiabá rivers, high Pantanal, was determined in the 1998 dry and wet seasons and ranged from

  15. [Investigation of mold fungi in air samples of elementary schools and evaluation of allergen-specific IgE levels in students' sera].

    PubMed

    Ovet, Habibe; Ergin, Cağrı; Kaleli, Ilknur

    2012-04-01

    , Penicillium camemberti, Penicillium chrysogenum, Penicillium commune, Penicillium expansum, Penicillium frequentans, Penicillium glaucum, Penicillium notatum, Penicillium roqueforti ve Penicillium viridicatum) (RIDASCREEN; R-Biopharm AG, Germany) levels were determined in those children. Total IgE levels above reference ranges were detected in 41% (9/22) of the screened sera samples. P.roqueforti, P.commune and P.camemberti antibodies were higher (Odds ratio as 5.50, 4.0 and 3.75, respectively) in sera with high total IgE levels. No independent variables were determined between individual and/or environmental factors and Penicillium-specific IgE antibodies. It was concluded that those three strains should be chosen as antigens for mold allergy screening tests which will be performed among atopic cases in our region. In conclusion it should be kept in mind that molds have a possible role in the development of allergic symptoms, however, they are not the sole determining factor in this process. In the investigation of the allergic diseases environmental factors should be considered and standardized methods should be applied.

  16. Specificity and Control of Choline–O-Sulfate Transport in Filamentous Fungi

    PubMed Central

    Bellenger, Nicole; Nissen, Per; Wood, Trudy C.; Segel, Irwin H.

    1968-01-01

    Choline-O-sulfate uptake by Penicillium notatum showed the following characteristics. (i) Transport was mediated by a permease which is highly specific for choline-O-sulfate. No significant inhibition of transport was caused by choline, choline-O-phosphate, acetylcholine, ethanolamine-O-phosphate, ethanolamine-O-sulfate, methanesulfonyl choline, 2-aminoethane thiosulfate, or the monomethyl or dimethyl analogues of choline-O-sulfate. Similarly, no significant inhibition was caused by any common sulfur amino acid or inorganic sulfur compound. Mutants lacking the inorganic sulfate permease possessed the choline-O-sulfate permease at wild-type levels. (ii) Choline-O-sulfate transport obeyed saturation kinetics (Km = 10−4 to 3 × 10−4m; Vmax = 1 to 6 μmoles per g per min). The kinetics of transport between 10−9 and 10−1m external choline-O-sulfate showed that only one saturable mechanism is present. (iii) Transport was sensitive to 2,4-dinitrophenol, azide, N-ethylmaleimide, p-chloromercuribenzoate, and cyanide. Ouabain, phloridzin, and eserine had no effect. (iv) Transport was pH-dependent with an optimum at pH 6. Variations in the ionic strength of the incubation medium had no effect. (v) Transport was temperature-dependent with a Q10 of greater than 2 between 3 and 40 C. Transport decreased rapidly above 40 C. (vi) Ethylenediaminetetraacetate (sodium salts, pH 6) had no effect, nor was there any stimulation by metal or nonmetal ions. Cu++, Ag+, and Hg++ were inhibitory. (vii) The initial rate at which the ester is transported was independent of intracellular hydrolysis. After long periods of incubation (> 10 min), a significant proportion of the transported choline-O-sulfate was hydrolyzed intracellulary. In the presence of 5 × 10−3m external choline-O-sulfate, the mycelia accumulated choline-O-sulfate to an apparent intracellular concentration of 0.075 m by 3 hr. Transport was unidirectional. No efflux or exchange of 35S-choline-O-sulfate was observed

  17. Allergen-specific IgE levels against crude mould and storage mite extracts and recombinant mould allergens in sera from horses affected with chronic bronchitis.

    PubMed

    Eder, C; Crameri, R; Mayer, C; Eicher, R; Straub, R; Gerber, H; Lazary, S; Marti, E

    2000-03-15

    Immunoglobulin E antibody (IgE) levels against four recombinant (r) mould allergens (r-Aspergillus fumigatus [rAsp f] 7, 8 and 9; r-Alternaria alternata 1 [rAlta1]) and crude mould (Aspergillus fumigatus, Alternaria alternata, Penicillium notatum) and storage mite extracts were determined by ELISA in sera from 24 pulmonary sound control horses and 26 horses suffering from chronic bronchitis/bronchiolitis (CB), also called chronic obstructive pulmonary disease (COPD). Serum IgG and IgA titres were also determined against Aspergillus fumigatus extract and rAsp f 8.IgE against the crude extracts could be measured in all sera, but there was no significant difference between CB-affected and control horses. In contrast, only 8-30% of the horses, depending on the r-allergen tested, had detectable IgE levels in serum against the r-allergens. Horses with CB had significantly more often detectable IgE levels than controls against rAlt a 1 (10/26 and 3/24, respectively, p=0. 054), rAsp f 7 (13/26 and 2/24, respectively, p<0.01) and rAsp f 8 (11/26 and 1/24, respectively, p<0.01). Only four horses (three CB-affected and one healthy, p0.05) had detectable IgE levels against rAsp f 9. Furthermore, CB-affected horses were often sensitised against two or more r-allergens (13/26 of the CB-affected horses) while only one of the 24 healthy horses had positive IgE levels against more than one r-allergens. Similarly to IgE levels, no significant differences between CB-affected and healthy horses were found for IgG titres against the Aspergillus fumigatus extract. However, horses with CB had significantly higher serum IgG titres against rAsp f 8 than healthy controls (median=28 versus 10 relative ELISA units [REU], p<0.01). Additionally, horses with detectable IgE titres against rAsp f 8 had significantly higher IgG titres against this r-allergen than horses with undetectable IgE titres (median IgG titres=46 and 13 REU, respectively; p<0.01). For serum IgA titres, neither differences

  18. Hydrology and Soil Erosion in Tropical Rainforests and Pasture Lands on the Atherton Tablelands, North Queensland, Australia - a rainfall simulator study

    NASA Astrophysics Data System (ADS)

    Joanne, Joanne; Ciesiolka, Cyril

    2010-05-01

    The Barron and Johnstone Rivers rise in the basaltic Atherton Tableland, North Queensland, Australia, and flow into the Coral Sea and Great Barrier Reef World Heritage Area (GBRWHA). Natural rainforest in this region was cleared for settlement in the early 20th century. Rapid decline in soil fertility during the 1940's and 50's forced landholders to turn to pasture based industries from row crop agriculture. Since then, these pasture based industries have intensified. The intensified land use has been linked to increases in sediment and nutrient levels in terrestrial runoff and identified as a major environmental threat to the GBRWHA, which has raised alarm for the tourist industry and resource managers. Studies linking land-use to pollutant discharge are often based on measurements and modelling of end of catchment measurements of water quality. Whilst such measurements can be a reasonable indicator of the effects of land use on pollutant discharge to waterways, they are often a gross assessment. This project used rainfall simulations to investigate the relationship between land use and management with sources and sinks of runoff and soil erosion within the Barron and Johnstone Rivers catchments. Rainfall simulations were conducted and pollutant loads measured in natural rainforest, as well as dairy and beef farming systems. The dairy farming systems included an effluent fed pasture, a high mineral fertilizer and supplementary irrigation farm, and a rainfed organic pasture that relied on tropical legumes and introduced grasses and returned organic material to the soil. One of the beef farming systems used a 7-10 day rotation with a low fertilizer regime (kikuyu mostly), while the other, used a long period- two paddock-rotation with no fertiliser and paspalum pastures. The rainforests were generally small isolated enclaves with a well developed shrub layer (1-3 m), and a presence of scattered, deciduous trees. Simulations were carried out on sites which were