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Sample records for pcr-free method detects

  1. PCR-free quantitative detection of genetically modified organism from raw materials. An electrochemiluminescence-based bio bar code method.

    PubMed

    Zhu, Debin; Tang, Yabing; Xing, Da; Chen, Wei R

    2008-05-15

    A bio bar code assay based on oligonucleotide-modified gold nanoparticles (Au-NPs) provides a PCR-free method for quantitative detection of nucleic acid targets. However, the current bio bar code assay requires lengthy experimental procedures including the preparation and release of bar code DNA probes from the target-nanoparticle complex and immobilization and hybridization of the probes for quantification. Herein, we report a novel PCR-free electrochemiluminescence (ECL)-based bio bar code assay for the quantitative detection of genetically modified organism (GMO) from raw materials. It consists of tris-(2,2'-bipyridyl) ruthenium (TBR)-labeled bar code DNA, nucleic acid hybridization using Au-NPs and biotin-labeled probes, and selective capture of the hybridization complex by streptavidin-coated paramagnetic beads. The detection of target DNA is realized by direct measurement of ECL emission of TBR. It can quantitatively detect target nucleic acids with high speed and sensitivity. This method can be used to quantitatively detect GMO fragments from real GMO products.

  2. PCR-Free Detection of Genetically Modified Organisms Using Magnetic Capture Technology and Fluorescence Cross-Correlation Spectroscopy

    PubMed Central

    Zhou, Xiaoming; Xing, Da; Tang, Yonghong; Chen, Wei R.

    2009-01-01

    The safety of genetically modified organisms (GMOs) has attracted much attention recently. Polymerase chain reaction (PCR) amplification is a common method used in the identification of GMOs. However, a major disadvantage of PCR is the potential amplification of non-target DNA, causing false-positive identification. Thus, there remains a need for a simple, reliable and ultrasensitive method to identify and quantify GMO in crops. This report is to introduce a magnetic bead-based PCR-free method for rapid detection of GMOs using dual-color fluorescence cross-correlation spectroscopy (FCCS). The cauliflower mosaic virus 35S (CaMV35S) promoter commonly used in transgenic products was targeted. CaMV35S target was captured by a biotin-labeled nucleic acid probe and then purified using streptavidin-coated magnetic beads through biotin-streptavidin linkage. The purified target DNA fragment was hybridized with two nucleic acid probes labeled respectively by Rhodamine Green and Cy5 dyes. Finally, FCCS was used to detect and quantify the target DNA fragment through simultaneously detecting the fluorescence emissions from the two dyes. In our study, GMOs in genetically engineered soybeans and tomatoes were detected, using the magnetic bead-based PCR-free FCCS method. A detection limit of 50 pM GMOs target was achieved and PCR-free detection of GMOs from 5 µg genomic DNA with magnetic capture technology was accomplished. Also, the accuracy of GMO determination by the FCCS method is verified by spectrophotometry at 260 nm using PCR amplified target DNA fragment from GM tomato. The new method is rapid and effective as demonstrated in our experiments and can be easily extended to high-throughput and automatic screening format. We believe that the new magnetic bead-assisted FCCS detection technique will be a useful tool for PCR-free GMOs identification and other specific nucleic acids. PMID:19956680

  3. PCR-free detection of genetically modified organisms using magnetic capture technology and fluorescence cross-correlation spectroscopy.

    PubMed

    Zhou, Xiaoming; Xing, Da; Tang, Yonghong; Chen, Wei R

    2009-11-26

    The safety of genetically modified organisms (GMOs) has attracted much attention recently. Polymerase chain reaction (PCR) amplification is a common method used in the identification of GMOs. However, a major disadvantage of PCR is the potential amplification of non-target DNA, causing false-positive identification. Thus, there remains a need for a simple, reliable and ultrasensitive method to identify and quantify GMO in crops. This report is to introduce a magnetic bead-based PCR-free method for rapid detection of GMOs using dual-color fluorescence cross-correlation spectroscopy (FCCS). The cauliflower mosaic virus 35S (CaMV35S) promoter commonly used in transgenic products was targeted. CaMV35S target was captured by a biotin-labeled nucleic acid probe and then purified using streptavidin-coated magnetic beads through biotin-streptavidin linkage. The purified target DNA fragment was hybridized with two nucleic acid probes labeled respectively by Rhodamine Green and Cy5 dyes. Finally, FCCS was used to detect and quantify the target DNA fragment through simultaneously detecting the fluorescence emissions from the two dyes. In our study, GMOs in genetically engineered soybeans and tomatoes were detected, using the magnetic bead-based PCR-free FCCS method. A detection limit of 50 pM GMOs target was achieved and PCR-free detection of GMOs from 5 microg genomic DNA with magnetic capture technology was accomplished. Also, the accuracy of GMO determination by the FCCS method is verified by spectrophotometry at 260 nm using PCR amplified target DNA fragment from GM tomato. The new method is rapid and effective as demonstrated in our experiments and can be easily extended to high-throughput and automatic screening format. We believe that the new magnetic bead-assisted FCCS detection technique will be a useful tool for PCR-free GMOs identification and other specific nucleic acids.

  4. A PCR-free fluorescence strategy for detecting telomerase activity via double amplification strategy.

    PubMed

    Zhang, Xiafei; Cheng, Rui; Shi, Zhilu; Jin, Yan

    2016-01-15

    As a universal tumor biomarker, research on the activity and inhibition of telomerase is of great importance for cancer diagnosis and therapy. Although the telomeric repeat amplification protocol (TRAP) has served as a powerful assay for detecting telomerase activity, its application has been significantly limited by amplification related errors and time-consuming procedure. To address the limitations of PCR-based protocol, a dual amplification fluorescence assay was developed for PCR-free detecting telomerase activity. Briefly, we designed an arch-structure DNA probe to specifically control strand displacement reaction and subsequent enzyme-aided amplification. Telomerase substrate (TS) primer was extended by telomerase to form long elongation products which contain several TTAGGG repeat units. So, one elongation product can release more than one trigger DNA (t-DNA) via strand displacement reaction to realize first amplification. Subsequently, t-DNA specifically opened molecular beacon (MB) to restore the fluorescence of MB. Meanwhile, t-DNA was recycled by the aid of nicking endonuclease to continuously open more and more MBs, leading to a second amplification. Owing to the double amplification strategy, the proposed method allowed the measurement of telomerase activity in crude cell extracts equivalent to 5 HeLa cells and 10 CCRF-CEM cells without PCR amplification. Besides, the influence of telomere-binding ligands on the telomerase activity demonstrated that the proposed method holds the potential to evaluate the inhibition efficiency of telomerase inhibitors.

  5. Two-step, PCR-free telomerase detection by using exonuclease III-aided target recycling.

    PubMed

    Zuo, Xiaolei; Xia, Fan; Patterson, Adriana; Soh, H Tom; Xiao, Yi; Plaxco, Kevin W

    2011-12-16

    We report the sensitive detection of telomerase activity by using exonuclease III-aided target recycling to amplify the signal produced by a chimeric LNA-DNA molecular beacon. We demonstrate the specific detection of as few as 30 telomerase-positive breast cancer cells in a single-measurement fluorescence assay that avoids the problematic PCR and gel analysis of the current "gold-standard" assay.

  6. A highly sensitive and specific biosensor for ligation- and PCR-free detection of microRNAs.

    PubMed

    Gao, Zhiqiang; Peng, Yanfen

    2011-05-15

    A highly sensitive microRNA (miRNA) biosensor for both ligation- and PCR-free detection of miRNAs is described in this work. The biosensor was made of a monolayer of long oligonucleotide capture probes (CPs) comprising of miRNA capturing segments at the top (3' termini) and detection probe capturing segments at the bottom (5' termini). Following hybridization with a target miRNA, a cocktail of Surveyor(®) and exonuclease I in pH 7.4 phosphate buffered saline was applied to the biosensor. Unhybridized CP strands and mismatched miRNA/CP duplexes were digested while complementarily hybridized ones remained intact. Thereafter, electrochemically activated glucose oxidase-tagged peptide nucleic acid detection probes (GOx-DP) were hybridized to the bottom segments of the CPs on the biosensor. The number of GOx molecules found at the biosensor surface coincides with the number of miRNA strands hybridized and therefore correlates directly to the concentration of the target miRNA. A detection limit of 10 fM and a linear current-concentration relationship up to 10 pM were attained under optimized conditions. The biosensor effectively eliminated the needs for chemical/biological ligation and PCR. It was showed that there is little cross-hybridization among closely related miRNA family members even at single-base-mismatched levels. Successful attempts were made in applying the biosensor to the detection of miRNAs in total RNA extracted from cell lines. PMID:21420848

  7. PCR-free and label-free fluorescent detection of telomerase activity at single-cell level based on triple amplification.

    PubMed

    Gao, Yanfang; Xu, Jing; Li, Baoxin; Jin, Yan

    2016-07-15

    As a universal biomarker for cancer diagnostics and cancer therapeutics, telomerase has attracted extensive attention concerning its detection and discovery of its inhibitors. Herein, we developed a PCR-free and label-free fluorescent strategy for facile, reliable and highly sensitive assay of human telomerase activity from crude cancer cell extracts. A G-quadruplex-selective fluorescent dye, N-methyl mesoporphyrin IX (NMM), was utilized as signal probe. Two hairpin probes with hidden G-quadruplex strand in their stem were designed as assembly components of strand displacement reaction (SDR). In this strategy, one telomerase elongation product contains several hexamer repeats which can hybridize with numerous assistant DNA to release a lot of trigger DNA (T-DNA) of SDR for achieving first step amplification. Then, strand displacement reaction led to the formation of G-quadruplex at the both end of two hairpin DNA probes for realizing second step amplification. Finally, the re-released T-DNA initiated another cycle of SDR, resulting in a significant increase in the fluorescence intensity of NMM. By taking advantage of triple signal amplification, the telomerase activity in the HeLa extracts equivalent to 1-3000 cells was detected in homogeneous solution. Telomerase activities of different cell lines, including cancer cells and normal cell, were also successfully evaluated. Meanwhile, the inhibition effect of 3'-azido-3'-deoxythymidine (AZT) was also investigated. Therefore, it offers a simple and reliable method for detecting telomerase activity at single-cell level without complex pre-modification of probe and enzyme auxiliary signal amplification, which has the merits of simplicity, rapid response, low cost and high reliability. PMID:26999622

  8. PCR-free and label-free fluorescent detection of telomerase activity at single-cell level based on triple amplification.

    PubMed

    Gao, Yanfang; Xu, Jing; Li, Baoxin; Jin, Yan

    2016-07-15

    As a universal biomarker for cancer diagnostics and cancer therapeutics, telomerase has attracted extensive attention concerning its detection and discovery of its inhibitors. Herein, we developed a PCR-free and label-free fluorescent strategy for facile, reliable and highly sensitive assay of human telomerase activity from crude cancer cell extracts. A G-quadruplex-selective fluorescent dye, N-methyl mesoporphyrin IX (NMM), was utilized as signal probe. Two hairpin probes with hidden G-quadruplex strand in their stem were designed as assembly components of strand displacement reaction (SDR). In this strategy, one telomerase elongation product contains several hexamer repeats which can hybridize with numerous assistant DNA to release a lot of trigger DNA (T-DNA) of SDR for achieving first step amplification. Then, strand displacement reaction led to the formation of G-quadruplex at the both end of two hairpin DNA probes for realizing second step amplification. Finally, the re-released T-DNA initiated another cycle of SDR, resulting in a significant increase in the fluorescence intensity of NMM. By taking advantage of triple signal amplification, the telomerase activity in the HeLa extracts equivalent to 1-3000 cells was detected in homogeneous solution. Telomerase activities of different cell lines, including cancer cells and normal cell, were also successfully evaluated. Meanwhile, the inhibition effect of 3'-azido-3'-deoxythymidine (AZT) was also investigated. Therefore, it offers a simple and reliable method for detecting telomerase activity at single-cell level without complex pre-modification of probe and enzyme auxiliary signal amplification, which has the merits of simplicity, rapid response, low cost and high reliability.

  9. Mitochondrial capture enriches mito-DNA 100 fold, enabling PCR-free mitogenomics biodiversity analysis.

    PubMed

    Liu, Shanlin; Wang, Xin; Xie, Lin; Tan, Meihua; Li, Zhenyu; Su, Xu; Zhang, Hao; Misof, Bernhard; Kjer, Karl M; Tang, Min; Niehuis, Oliver; Jiang, Hui; Zhou, Xin

    2016-03-01

    Biodiversity analyses based on next-generation sequencing (NGS) platforms have developed by leaps and bounds in recent years. A PCR-free strategy, which can alleviate taxonomic bias, was considered as a promising approach to delivering reliable species compositions of targeted environments. The major impediment of such a method is the lack of appropriate mitochondrial DNA enrichment ways. Because mitochondrial genomes (mitogenomes) make up only a small proportion of total DNA, PCR-free methods will inevitably result in a huge excess of data (>99%). Furthermore, the massive volume of sequence data is highly demanding on computing resources. Here, we present a mitogenome enrichment pipeline via a gene capture chip that was designed by virtue of the mitogenome sequences of the 1000 Insect Transcriptome Evolution project (1KITE, www.1kite.org). A mock sample containing 49 species was used to evaluate the efficiency of the mitogenome capture method. We demonstrate that the proportion of mitochondrial DNA can be increased by approximately 100-fold (from the original 0.47% to 42.52%). Variation in phylogenetic distances of target taxa to the probe set could in principle result in bias in abundance. However, the frequencies of input taxa were largely maintained after capture (R(2) = 0.81). We suggest that our mitogenome capture approach coupled with PCR-free shotgun sequencing could provide ecological researchers an efficient NGS method to deliver reliable biodiversity assessment.

  10. Multigrid contact detection method

    NASA Astrophysics Data System (ADS)

    He, Kejing; Dong, Shoubin; Zhou, Zhaoyao

    2007-03-01

    Contact detection is a general problem of many physical simulations. This work presents a O(N) multigrid method for general contact detection problems (MGCD). The multigrid idea is integrated with contact detection problems. Both the time complexity and memory consumption of the MGCD are O(N) . Unlike other methods, whose efficiencies are influenced strongly by the object size distribution, the performance of MGCD is insensitive to the object size distribution. We compare the MGCD with the no binary search (NBS) method and the multilevel boxing method in three dimensions for both time complexity and memory consumption. For objects with similar size, the MGCD is as good as the NBS method, both of which outperform the multilevel boxing method regarding memory consumption. For objects with diverse size, the MGCD outperform both the NBS method and the multilevel boxing method. We use the MGCD to solve the contact detection problem for a granular simulation system based on the discrete element method. From this granular simulation, we get the density property of monosize packing and binary packing with size ratio equal to 10. The packing density for monosize particles is 0.636. For binary packing with size ratio equal to 10, when the number of small particles is 300 times as the number of big particles, the maximal packing density 0.824 is achieved.

  11. Methods of Melanoma Detection.

    PubMed

    Leachman, Sancy A; Cassidy, Pamela B; Chen, Suephy C; Curiel, Clara; Geller, Alan; Gareau, Daniel; Pellacani, Giovanni; Grichnik, James M; Malvehy, Josep; North, Jeffrey; Jacques, Steven L; Petrie, Tracy; Puig, Susana; Swetter, Susan M; Tofte, Susan; Weinstock, Martin A

    2016-01-01

    Detection and removal of melanoma, before it has metastasized, dramatically improves prognosis and survival. The purpose of this chapter is to (1) summarize current methods of melanoma detection and (2) review state-of-the-art detection methods and technologies that have the potential to reduce melanoma mortality. Current strategies for the detection of melanoma range from population-based educational campaigns and screening to the use of algorithm-driven imaging technologies and performance of assays that identify markers of transformation. This chapter will begin by describing state-of-the-art methods for educating and increasing awareness of at-risk individuals and for performing comprehensive screening examinations. Standard and advanced photographic methods designed to improve reliability and reproducibility of the clinical examination will also be reviewed. Devices that magnify and/or enhance malignant features of individual melanocytic lesions (and algorithms that are available to interpret the results obtained from these devices) will be compared and contrasted. In vivo confocal microscopy and other cellular-level in vivo technologies will be compared to traditional tissue biopsy, and the role of a noninvasive "optical biopsy" in the clinical setting will be discussed. Finally, cellular and molecular methods that have been applied to the diagnosis of melanoma, such as comparative genomic hybridization (CGH), fluorescent in situ hybridization (FISH), and quantitative reverse transcriptase polymerase chain reaction (qRT-PCR), will be discussed. PMID:26601859

  12. Methods of Endotoxin Detection.

    PubMed

    Su, Wenqiong; Ding, Xianting

    2015-08-01

    Endotoxin, present in the outer membrane of all gram-negative bacteria, can pose serious risks to human health, from irreversible shock to death. Therefore, it is essential to develop sensitive, accurate, and rapid methods for its detection. The rabbit pyrogen test is the first standard technique for endotoxin detection and, nowadays, has been replaced by the Limulus Amoebocyte Lysate test, which is the most popular detection technique for endotoxin. With in-depth understanding of endotoxin, biosensors based on endotoxin-sensing components are promising alternatives to pursue in developing low-cost, easy-operation, and fast-response endotoxin detection techniques. This article summarizes the recent advances of endotoxin detection methods with a particular emphasis on optical and electrochemical biosensors based on various sensing elements ranging from nature biomolecules to artificial materials. As the research and technological revolution continues, the highly integrated and miniaturized commercial devices for sensitively and reliably detecting endotoxin will provide a wide range of applications in people's daily life. PMID:25720597

  13. Methods of Endotoxin Detection.

    PubMed

    Su, Wenqiong; Ding, Xianting

    2015-08-01

    Endotoxin, present in the outer membrane of all gram-negative bacteria, can pose serious risks to human health, from irreversible shock to death. Therefore, it is essential to develop sensitive, accurate, and rapid methods for its detection. The rabbit pyrogen test is the first standard technique for endotoxin detection and, nowadays, has been replaced by the Limulus Amoebocyte Lysate test, which is the most popular detection technique for endotoxin. With in-depth understanding of endotoxin, biosensors based on endotoxin-sensing components are promising alternatives to pursue in developing low-cost, easy-operation, and fast-response endotoxin detection techniques. This article summarizes the recent advances of endotoxin detection methods with a particular emphasis on optical and electrochemical biosensors based on various sensing elements ranging from nature biomolecules to artificial materials. As the research and technological revolution continues, the highly integrated and miniaturized commercial devices for sensitively and reliably detecting endotoxin will provide a wide range of applications in people's daily life.

  14. Methods for Doping Detection.

    PubMed

    Ponzetto, Federico; Giraud, Sylvain; Leuenberger, Nicolas; Boccard, Julien; Nicoli, Raul; Baume, Norbert; Rudaz, Serge; Saugy, Martial

    2016-01-01

    Over the past few years, the World Anti-Doping Agency (WADA) has focused its efforts on detecting not only small prohibited molecules, but also larger endogenous molecules such as hormones, in the view of implementing an endocrinological module in the Athlete Biological Passport (ABP). In this chapter, the detection of two major types of hormones used for doping, growth hormone (GH) and endogenous anabolic androgenic steroids (EAASs), will be discussed: a brief historical background followed by a description of state-of-the-art methods applied by accredited anti-doping laboratories will be provided and then current research trends outlined. In addition, microRNAs (miRNAs) will also be presented as a new class of biomarkers for doping detection. PMID:27348309

  15. Error detection method

    DOEpatents

    Olson, Eric J.

    2013-06-11

    An apparatus, program product, and method that run an algorithm on a hardware based processor, generate a hardware error as a result of running the algorithm, generate an algorithm output for the algorithm, compare the algorithm output to another output for the algorithm, and detect the hardware error from the comparison. The algorithm is designed to cause the hardware based processor to heat to a degree that increases the likelihood of hardware errors to manifest, and the hardware error is observable in the algorithm output. As such, electronic components may be sufficiently heated and/or sufficiently stressed to create better conditions for generating hardware errors, and the output of the algorithm may be compared at the end of the run to detect a hardware error that occurred anywhere during the run that may otherwise not be detected by traditional methodologies (e.g., due to cooling, insufficient heat and/or stress, etc.).

  16. Method for detecting biomolecules

    DOEpatents

    Huo, Qisheng; Liu, Jun

    2008-08-12

    A method for detecting and measuring the concentration of biomolecules in solution, utilizing a conducting electrode in contact with a solution containing target biomolecules, with a film with controllable pore size distribution characteristics applied to at least one surface of the conducting electrode. The film is functionalized with probe molecules that chemically interact with the target biomolecules at the film surface, blocking indicator molecules present in solution from diffusing from the solution to the electrode, thereby changing the electrochemical response of the electrode

  17. Nucleic acid detection methods

    DOEpatents

    Smith, C.L.; Yaar, R.; Szafranski, P.; Cantor, C.R.

    1998-05-19

    The invention relates to methods for rapidly determining the sequence and/or length a target sequence. The target sequence may be a series of known or unknown repeat sequences which are hybridized to an array of probes. The hybridized array is digested with a single-strand nuclease and free 3{prime}-hydroxyl groups extended with a nucleic acid polymerase. Nuclease cleaved heteroduplexes can be easily distinguish from nuclease uncleaved heteroduplexes by differential labeling. Probes and target can be differentially labeled with detectable labels. Matched target can be detected by cleaving resulting loops from the hybridized target and creating free 3-hydroxyl groups. These groups are recognized and extended by polymerases added into the reaction system which also adds or releases one label into solution. Analysis of the resulting products using either solid phase or solution. These methods can be used to detect characteristic nucleic acid sequences, to determine target sequence and to screen for genetic defects and disorders. Assays can be conducted on solid surfaces allowing for multiple reactions to be conducted in parallel and, if desired, automated. 18 figs.

  18. Nucleic Acid Detection Methods

    DOEpatents

    Smith, Cassandra L.; Yaar, Ron; Szafranski, Przemyslaw; Cantor, Charles R.

    1998-05-19

    The invention relates to methods for rapidly determining the sequence and/or length a target sequence. The target sequence may be a series of known or unknown repeat sequences which are hybridized to an array of probes. The hybridized array is digested with a single-strand nuclease and free 3'-hydroxyl groups extended with a nucleic acid polymerase. Nuclease cleaved heteroduplexes can be easily distinguish from nuclease uncleaved heteroduplexes by differential labeling. Probes and target can be differentially labeled with detectable labels. Matched target can be detected by cleaving resulting loops from the hybridized target and creating free 3-hydroxyl groups. These groups are recognized and extended by polymerases added into the reaction system which also adds or releases one label into solution. Analysis of the resulting products using either solid phase or solution. These methods can be used to detect characteristic nucleic acid sequences, to determine target sequence and to screen for genetic defects and disorders. Assays can be conducted on solid surfaces allowing for multiple reactions to be conducted in parallel and, if desired, automated.

  19. Waveguide disturbance detection method

    DOEpatents

    Korneev, Valeri A.; Nihei, Kurt T.; Myer, Larry R.

    2000-01-01

    A method for detection of a disturbance in a waveguide comprising transmitting a wavefield having symmetric and antisymmetric components from a horizontally and/or vertically polarized source and/or pressure source disposed symmetrically with respect to the longitudinal central axis of the waveguide at one end of the waveguide, recording the horizontal and/or vertical component or a pressure of the wavefield with a vertical array of receivers disposed at the opposite end of the waveguide, separating the wavenumber transform of the wavefield into the symmetric and antisymmetric components, integrating the symmetric and antisymmetric components over a broad frequency range, and comparing the magnitude of the symmetric components and the antisymmetric components to an expected magnitude for the symmetric components and the antisymmetric components for a waveguide of uniform thickness and properties thereby determining whether or not a disturbance is present inside the waveguide.

  20. Methods of DNA methylation detection

    NASA Technical Reports Server (NTRS)

    Maki, Wusi Chen (Inventor); Filanoski, Brian John (Inventor); Mishra, Nirankar (Inventor); Rastogi, Shiva (Inventor)

    2010-01-01

    The present invention provides for methods of DNA methylation detection. The present invention provides for methods of generating and detecting specific electronic signals that report the methylation status of targeted DNA molecules in biological samples.Two methods are described, direct and indirect detection of methylated DNA molecules in a nano transistor based device. In the direct detection, methylated target DNA molecules are captured on the sensing surface resulting in changes in the electrical properties of a nano transistor. These changes generate detectable electronic signals. In the indirect detection, antibody-DNA conjugates are used to identify methylated DNA molecules. RNA signal molecules are generated through an in vitro transcription process. These RNA molecules are captured on the sensing surface change the electrical properties of nano transistor thereby generating detectable electronic signals.

  1. Method for detecting leaks

    SciTech Connect

    Baillie, L.A.; Senese, F.J.

    1988-09-27

    This patent describes a method for determining leaks in a storage tank containing a liquid. The method consists of: locating a float means initially at a depth in the liquid approximately equal to V/sub L//S/sub L/ where V/sub L/ is the volume of the liquid in the tank and S/sub L/ is free surface area of the liquid in the tank; saturating vapor above the liquid in the tank with vapor of the liquid by atomizing so as to fill the vapor above the liquid with small drops of liquid or coating surfaces of the tank above the liquid with a thin layer of the liquid so as to hasten saturation of the vapor above the liquid, so that temperature variation of the liquid in the tank does not change the depth at which the float means floats in the liquid; and determining changes of location of the float means in the tank.

  2. Local method for detecting communities

    NASA Astrophysics Data System (ADS)

    Bagrow, James P.; Bollt, Erik M.

    2005-10-01

    We propose a method of community detection that is computationally inexpensive and possesses physical significance to a member of a social network. This method is unlike many divisive and agglomerative techniques and is local in the sense that a community can be detected within a network without requiring knowledge of the entire network. A global application of this method is also introduced. Several artificial and real-world networks, including the famous Zachary karate club, are analyzed.

  3. Method for detecting an element

    DOEpatents

    Blackwood, Larry G.; Reber, Edward L.; Rohde, Kenneth W.

    2007-02-06

    A method for detecting an element is disclosed and which includes the steps of providing a gamma-ray spectrum which depicts, at least in part, a test region having boundaries, and which has a small amount of the element to be detected; providing a calculation which detects the small amount of the element to be detected; and providing a moving window and performing the calculation within the moving window, and over a range of possible window boundaries within the test region to determine the location of the optimal test region within the gamma-ray spectrum.

  4. Method for detecting biological toxins

    SciTech Connect

    Ligler, F.S.; Campbell, J.R.

    1992-01-01

    Biological toxins are indirectly detected by using polymerase chain reaction to amplify unique nucleic acid sequences coding for the toxins or enzymes unique to toxin synthesis. Buffer, primers coding for the unique nucleic acid sequences and an amplifying enzyme are added to a sample suspected of containing the toxin. The mixture is then cycled thermally to exponentially amplify any of these unique nucleic acid sequences present in the sample. The amplified sequences can be detected by various means, including fluorescence. Detection of the amplified sequences is indicative of the presence of toxin in the original sample. By using more than one set of labeled primers, the method can be used to simultaneously detect several toxins in a sample.

  5. Survey of Anomaly Detection Methods

    SciTech Connect

    Ng, B

    2006-10-12

    This survey defines the problem of anomaly detection and provides an overview of existing methods. The methods are categorized into two general classes: generative and discriminative. A generative approach involves building a model that represents the joint distribution of the input features and the output labels of system behavior (e.g., normal or anomalous) then applies the model to formulate a decision rule for detecting anomalies. On the other hand, a discriminative approach aims directly to find the decision rule, with the smallest error rate, that distinguishes between normal and anomalous behavior. For each approach, we will give an overview of popular techniques and provide references to state-of-the-art applications.

  6. Method for detecting toxic gases

    DOEpatents

    Stetter, J.R.; Zaromb, S.; Findlay, M.W. Jr.

    1991-10-08

    A method is disclosed which is capable of detecting low concentrations of a pollutant or other component in air or other gas. This method utilizes a combination of a heating filament having a catalytic surface of a noble metal for exposure to the gas and producing a derivative chemical product from the component. An electrochemical sensor responds to the derivative chemical product for providing a signal indicative of the product. At concentrations in the order of about 1-100 ppm of tetrachloroethylene, neither the heating filament nor the electrochemical sensor is individually capable of sensing the pollutant. In the combination, the heating filament converts the benzyl chloride to one or more derivative chemical products which may be detected by the electrochemical sensor. 6 figures.

  7. Method for detecting toxic gases

    DOEpatents

    Stetter, Joseph R.; Zaromb, Solomon; Findlay, Jr., Melvin W.

    1991-01-01

    A method capable of detecting low concentrations of a pollutant or other component in air or other gas, utilizing a combination of a heating filament having a catalytic surface of a noble metal for exposure to the gas and producing a derivative chemical product from the component, and an electrochemical sensor responsive to the derivative chemical product for providing a signal indicative of the product. At concentrations in the order of about 1-100 ppm of tetrachloroethylene, neither the heating filament nor the electrochemical sensor is individually capable of sensing the pollutant. In the combination, the heating filament converts the benzyl chloride to one or more derivative chemical products which may be detected by the electrochemical sensor.

  8. Bacteria detection instrument and method

    NASA Technical Reports Server (NTRS)

    Renner, W.; Fealey, R. D. (Inventor)

    1972-01-01

    A method and apparatus for screening a sample fluid for bacterial presence are disclosed wherein the fluid sample is mixed with culture media of sufficient quantity to permit bacterial growth in order to obtain a test solution. The concentration of oxygen dissolved in the test solution is then monitored using the potential difference between a reference electrode and a noble metal electrode which are in contact with the test solution. The change in oxygen concentration which occurs during a period of time as indicated by the electrode potential difference is compared with a detection criterion which exceeds the change which would occur absent bacteria.

  9. Explosives detection system and method

    DOEpatents

    Reber, Edward L.; Jewell, James K.; Rohde, Kenneth W.; Seabury, Edward H.; Blackwood, Larry G.; Edwards, Andrew J.; Derr, Kurt W.

    2007-12-11

    A method of detecting explosives in a vehicle includes providing a first rack on one side of the vehicle, the rack including a neutron generator and a plurality of gamma ray detectors; providing a second rack on another side of the vehicle, the second rack including a neutron generator and a plurality of gamma ray detectors; providing a control system, remote from the first and second racks, coupled to the neutron generators and gamma ray detectors; using the control system, causing the neutron generators to generate neutrons; and performing gamma ray spectroscopy on spectra read by the gamma ray detectors to look for a signature indicative of presence of an explosive. Various apparatus and other methods are also provided.

  10. Immunofluorescence detection methods using microspheres

    NASA Astrophysics Data System (ADS)

    Szurdoki, Ferenc; Michael, Karri L.; Agrawal, Divya; Taylor, Laura C.; Schultz, Sandra L.; Walt, David R.

    1999-01-01

    Microsphere-based immunoassays were devised for compounds of agricultural and biomedical interest (e.g., digoxin, theophylline, and zearalenone). Commercially available microspheres with surface functional groups for chemical derivatization were used as solid carriers. After immobilizing the target substances, the surface of the haptenized microspheres was blocked by a protein to reduce aspecific binding. Competitive immunoassays were performed using the functionalized microspheres and antibodies labeled with horseradish peroxidase. Immunofluorescence signal amplification was achieved by enzyme-catalyzed reporter deposition (CARD). An epifluorescence microscope, a CCD camera interfaced with a computer, and microscopy image analysis software were employed for quantitative detection of fluorescent light emitted from individual microspheres. Integration of several such immunoassays and application of an optical encoding method enabled multianalyte determination. These immunoassays can also be utilized in an immunosensor array format. This immunoarray format could facilitate miniaturization and automation of multianalyte immunoassays.

  11. Particle detection systems and methods

    DOEpatents

    Morris, Christopher L.; Makela, Mark F.

    2010-05-11

    Techniques, apparatus and systems for detecting particles such as muons and neutrons. In one implementation, a particle detection system employs a plurality of drift cells, which can be for example sealed gas-filled drift tubes, arranged on sides of a volume to be scanned to track incoming and outgoing charged particles, such as cosmic ray-produced muons. The drift cells can include a neutron sensitive medium to enable concurrent counting of neutrons. The system can selectively detect devices or materials, such as iron, lead, gold, uranium, plutonium, and/or tungsten, occupying the volume from multiple scattering of the charged particles passing through the volume and can concurrently detect any unshielded neutron sources occupying the volume from neutrons emitted therefrom. If necessary, the drift cells can be used to also detect gamma rays. The system can be employed to inspect occupied vehicles at border crossings for nuclear threat objects.

  12. Method For Detecting Biological Agents

    DOEpatents

    Chen, Liaohai; McBranch, Duncan W.; Wang, Hsing-Lin; Whitten, David G.

    2005-12-27

    A sensor is provided including a polymer capable of having an alterable measurable property from the group of luminescence and electrical conductivity, the polymer having an intermediate combination of a recognition element, a tethering element and a property-altering element bound thereto and capable of altering the measurable property, the intermediate combination adapted for subsequent separation from the polymer upon exposure to an agent having an affinity for binding to the recognition element whereupon the separation of the intermediate combination from the polymer results in a detectable change in the alterable measurable property, and, detecting said detectable change in the alterable measurable property.

  13. Method of detecting sulfur dioxide

    DOEpatents

    Spicer, Leonard D.; Bennett, Dennis W.; Davis, Jon F.

    1985-01-01

    (CH.sub.3).sub.3 SiNSO is produced by the reaction of ((CH.sub.3).sub.3 Si).sub.2 NH with SO.sub.2. Also produced in the reaction are ((CH.sub.3).sub.3 Si).sub.2 O and a new solid compound [NH.sub.4 ][(CH.sub.3).sub.3 SiOSO.sub.2 ]. Both (CH.sub.3).sub.3 SiNSO and [NH.sub.4 ][(CH.sub.3).sub.3 SiOSO.sub.2 ] have fluorescent properties. The reaction of the subject invention is used in a method of measuring the concentration of SO.sub.2 pollutants in gases. By the method, a sample of gas is bubbled through a solution of ((CH.sub.3).sub.3 Si).sub.2 NH, whereby any SO.sub.2 present in the gas will react to produce the two fluorescent products. The measured fluorescence of these products can then be used to calculate the concentration of SO.sub.2 in the original gas sample. The solid product [NH.sub.4][(CH.sub.3).sub.3 SiOSO.sub.2 ] may be used as a standard in solid state NMR spectroscopy.

  14. Method for detecting coliform organisms

    NASA Technical Reports Server (NTRS)

    Nishioka, K.; Nibley, D. A.; Jeffers, E. L.; Brooks, R. L. (Inventor)

    1983-01-01

    A method and apparatus are disclosed for determining the concentration of coliform bacteria in a sample. The sample containing the coliform bacteria is cultured in a liquid growth medium. The cultured bacteria produce hydrogen and the hydrogen is vented to a second cell containing a buffer solution in which the hydrogen dissolves. By measuring the potential change in the buffer solution caused by the hydrogen, as a function of time, the initial concentration of bacteria in the sample is determined. Alternatively, the potential change in the buffer solution can be compared with the potential change in the liquid growth medium to verify that the potential change in the liquid growth medium is produced primarily by the hydrogen gas produced by the coliform bacteria.

  15. Method for Trace Oxygen Detection

    NASA Technical Reports Server (NTRS)

    Man, Kim Fung (Inventor); Boumsellek, Said (Inventor); Chutjian, Ara (Inventor)

    1997-01-01

    Trace levels of molecular oxygen are measured by introducing a gas containing the molecular oxygen into a target zone, and impacting the molecular oxygen in the target zone with electrons at the O(-) resonant energy level for dissociative electron attachment to produce O(-) ions. Preferably, the electrons have an energy of about 4 to about 10 eV. The amount of O(-) ions produced is measured, and is correlated with the molecular oxygen content in the target zone. The technique is effective for measuring levels of oxygen below 50 ppb. and even less than 1 ppb. The amount of O(-) can be measured in a quadrupole mass analyzer. Best results are obtained when the electrons have an energy of about 6 to about 8 eV. and preferably about 6.8 eV. The method can be used for other species by selecting the appropriate electron energy level.

  16. Spectral analysis method for detecting an element

    DOEpatents

    Blackwood, Larry G [Idaho Falls, ID; Edwards, Andrew J [Idaho Falls, ID; Jewell, James K [Idaho Falls, ID; Reber, Edward L [Idaho Falls, ID; Seabury, Edward H [Idaho Falls, ID

    2008-02-12

    A method for detecting an element is described and which includes the steps of providing a gamma-ray spectrum which has a region of interest which corresponds with a small amount of an element to be detected; providing nonparametric assumptions about a shape of the gamma-ray spectrum in the region of interest, and which would indicate the presence of the element to be detected; and applying a statistical test to the shape of the gamma-ray spectrum based upon the nonparametric assumptions to detect the small amount of the element to be detected.

  17. GMDD: a database of GMO detection methods

    PubMed Central

    Dong, Wei; Yang, Litao; Shen, Kailin; Kim, Banghyun; Kleter, Gijs A; Marvin, Hans JP; Guo, Rong; Liang, Wanqi; Zhang, Dabing

    2008-01-01

    Background Since more than one hundred events of genetically modified organisms (GMOs) have been developed and approved for commercialization in global area, the GMO analysis methods are essential for the enforcement of GMO labelling regulations. Protein and nucleic acid-based detection techniques have been developed and utilized for GMOs identification and quantification. However, the information for harmonization and standardization of GMO analysis methods at global level is needed. Results GMO Detection method Database (GMDD) has collected almost all the previous developed and reported GMOs detection methods, which have been grouped by different strategies (screen-, gene-, construct-, and event-specific), and also provide a user-friendly search service of the detection methods by GMO event name, exogenous gene, or protein information, etc. In this database, users can obtain the sequences of exogenous integration, which will facilitate PCR primers and probes design. Also the information on endogenous genes, certified reference materials, reference molecules, and the validation status of developed methods is included in this database. Furthermore, registered users can also submit new detection methods and sequences to this database, and the newly submitted information will be released soon after being checked. Conclusion GMDD contains comprehensive information of GMO detection methods. The database will make the GMOs analysis much easier. PMID:18522755

  18. Bioluminescent bioreporter integrated circuit detection methods

    DOEpatents

    Simpson, Michael L.; Paulus, Michael J.; Sayler, Gary S.; Applegate, Bruce M.; Ripp, Steven A.

    2005-06-14

    Disclosed are monolithic bioelectronic devices comprising a bioreporter and an OASIC. These bioluminescent bioreporter integrated circuit are useful in detecting substances such as pollutants, explosives, and heavy-metals residing in inhospitable areas such as groundwater, industrial process vessels, and battlefields. Also disclosed are methods and apparatus for detection of particular analytes, including ammonia and estrogen compounds.

  19. CURRENT METHODS FOR DETECTION OF CRYPTOSPORIDIUM SPECIES

    EPA Science Inventory

    Current methods for detecting protozoa in water produce results that are highly variable. It is difficult to determine if the methods themselves, or the procedures for testing these methods, are the source of the variability. If testing procedures are responsible for high varia...

  20. Methods for the detection of marine toxins

    SciTech Connect

    Wekell, M.M.; Manger, R.M.; Hadley, S.W.; Hungerford, J.M.

    1995-12-01

    Toxic materials have been dumped into the seas from waste streams and other pollutant sources such as runoff, etc. For protection of public health, it is essential that rapid, reliable and simple methods exist to detect marine toxins in seafoods. In addition, it is necessary to develop methods requiring a minimum of test material. Pure standards for many of the marine toxins are scarce. Reduced sample requirements extend the utility of detection methods in research and forensic applications as well. In the past, there was much reliance on the animal bioassay; however, this dependence hopefully will be reduced as newer instrumental techniques (chromatographic, mass spectrometric, electrophoretic), biochemical (immunochemical, receptor site assay), and cell bioassay methods are developed with a higher degree of precision and specificity. It is beneficial that a multiplicity of methods be available to detect marine toxins in seafoods. Each method has unique advantages and disadvantages.

  1. Automated Methods for Multiplexed Pathogen Detection

    SciTech Connect

    Straub, Tim M.; Dockendorff, Brian P.; Quinonez-Diaz, Maria D.; Valdez, Catherine O.; Shutthanandan, Janani I.; Tarasevich, Barbara J.; Grate, Jay W.; Bruckner-Lea, Cindy J.

    2005-09-01

    Detection of pathogenic microorganisms in environmental samples is a difficult process. Concentration of the organisms of interest also co-concentrates inhibitors of many end-point detection methods, notably, nucleic acid methods. In addition, sensitive, highly multiplexed pathogen detection continues to be problematic. The primary function of the BEADS (Biodetection Enabling Analyte Delivery System) platform is the automated concentration and purification of target analytes from interfering substances, often present in these samples, via a renewable surface column. In one version of BEADS, automated immunomagnetic separation (IMS) is used to separate cells from their samples. Captured cells are transferred to a flow-through thermal cycler where PCR, using labeled primers, is performed. PCR products are then detected by hybridization to a DNA suspension array. In another version of BEADS, cell lysis is performed, and community RNA is purified and directly labeled. Multiplexed detection is accomplished by direct hybridization of the RNA to a planar microarray. The integrated IMS/PCR version of BEADS can successfully purify and amplify 10 E. coli O157:H7 cells from river water samples. Multiplexed PCR assays for the simultaneous detection of E. coli O157:H7, Salmonella, and Shigella on bead suspension arrays was demonstrated for the detection of as few as 100 cells for each organism. Results for the RNA version of BEADS are also showing promising results. Automation yields highly purified RNA, suitable for multiplexed detection on microarrays, with microarray detection specificity equivalent to PCR. Both versions of the BEADS platform show great promise for automated pathogen detection from environmental samples. Highly multiplexed pathogen detection using PCR continues to be problematic, but may be required for trace detection in large volume samples. The RNA approach solves the issues of highly multiplexed PCR and provides ''live vs. dead'' capabilities. However

  2. Analytic sequential methods for detecting network intrusions

    NASA Astrophysics Data System (ADS)

    Chen, Xinjia; Walker, Ernest

    2014-05-01

    In this paper, we propose an analytic sequential methods for detecting port-scan attackers which routinely perform random "portscans" of IP addresses to find vulnerable servers to compromise. In addition to rigorously control the probability of falsely implicating benign remote hosts as malicious, our method performs significantly faster than other current solutions. We have developed explicit formulae for quick determination of the parameters of the new detection algorithm.

  3. Apparatus and methods for detecting chemical permeation

    DOEpatents

    Vo-Dinh, Tuan

    1994-01-01

    Apparatus and methods for detecting the permeation of hazardous or toxic chemicals through protective clothing are disclosed. The hazardous or toxic chemicals of interest do not possess the spectral characteristic of luminescence. The apparatus and methods utilize a spectrochemical modification technique to detect the luminescence quenching of an indicator compound which upon permeation of the chemical through the protective clothing, the indicator is exposed to the chemical, thus indicating chemical permeation.

  4. Coverage methods for early groundwater contamination detection.

    PubMed

    Nunes, Luís Miguel; da Conceição Cunha, Maria; Ribeiro, Luís

    2013-05-01

    A method based on space-filling coverage designs to optimize groundwater monitoring networks for plume detection and quantification is proposed. Space-filling objective functions are then compared with more classical functions. The method was applied to a hypothetical case-study with 160 candidate locations, resulting in final optimal design monitoring networks with 40 locations. Results show that the method is superior to those based strictly on the probability of contamination detection for quantifying maximum and mean values. In the light of these results fractal properties of space-filling coverage methods and of simulated annealing are also discussed.

  5. High sensitivity leak detection method and apparatus

    DOEpatents

    Myneni, Ganapatic R.

    1994-01-01

    An improved leak detection method is provided that utilizes the cyclic adsorption and desorption of accumulated helium on a non-porous metallic surface. The method provides reliable leak detection at superfluid helium temperatures. The zero drift that is associated with residual gas analyzers in common leak detectors is virtually eliminated by utilizing a time integration technique. The sensitivity of the apparatus of this disclosure is capable of detecting leaks as small as 1.times.10.sup.-18 atm cc sec.sup.-1.

  6. High sensitivity leak detection method and apparatus

    DOEpatents

    Myneni, G.R.

    1994-09-06

    An improved leak detection method is provided that utilizes the cyclic adsorption and desorption of accumulated helium on a non-porous metallic surface. The method provides reliable leak detection at superfluid helium temperatures. The zero drift that is associated with residual gas analyzers in common leak detectors is virtually eliminated by utilizing a time integration technique. The sensitivity of the apparatus of this disclosure is capable of detecting leaks as small as 1 [times] 10[sup [minus]18] atm cc sec[sup [minus]1]. 2 figs.

  7. Method for remote detection of trace contaminants

    DOEpatents

    Simonson, Robert J.; Hance, Bradley G.

    2003-09-09

    A method for remote detection of trace contaminants in a target area comprises applying sensor particles that preconcentrate the trace contaminant to the target area and detecting the contaminant-sensitive fluorescence from the sensor particles. The sensor particles can have contaminant-sensitive and contaminant-insensitive fluorescent compounds to enable the determination of the amount of trace contaminant present in the target are by relative comparison of the emission of the fluorescent compounds by a local or remote fluorescence detector. The method can be used to remotely detect buried minefields.

  8. Adaptive sequential methods for detecting network intrusions

    NASA Astrophysics Data System (ADS)

    Chen, Xinjia; Walker, Ernest

    2013-06-01

    In this paper, we propose new sequential methods for detecting port-scan attackers which routinely perform random "portscans" of IP addresses to find vulnerable servers to compromise. In addition to rigorously control the probability of falsely implicating benign remote hosts as malicious, our method performs significantly faster than other current solutions. Moreover, our method guarantees that the maximum amount of observational time is bounded. In contrast to the previous most effective method, Threshold Random Walk Algorithm, which is explicit and analytical in nature, our proposed algorithm involve parameters to be determined by numerical methods. We have introduced computational techniques such as iterative minimax optimization for quick determination of the parameters of the new detection algorithm. A framework of multi-valued decision for detecting portscanners and DoS attacks is also proposed.

  9. An enhanced Monte Carlo outlier detection method.

    PubMed

    Zhang, Liangxiao; Li, Peiwu; Mao, Jin; Ma, Fei; Ding, Xiaoxia; Zhang, Qi

    2015-09-30

    Outlier detection is crucial in building a highly predictive model. In this study, we proposed an enhanced Monte Carlo outlier detection method by establishing cross-prediction models based on determinate normal samples and analyzing the distribution of prediction errors individually for dubious samples. One simulated and three real datasets were used to illustrate and validate the performance of our method, and the results indicated that this method outperformed Monte Carlo outlier detection in outlier diagnosis. After these outliers were removed, the value of validation by Kovats retention indices and the root mean square error of prediction decreased from 3.195 to 1.655, and the average cross-validation prediction error decreased from 2.0341 to 1.2780. This method helps establish a good model by eliminating outliers. © 2015 Wiley Periodicals, Inc.

  10. Inner Crack Detection Method for Cantilever Beams

    NASA Astrophysics Data System (ADS)

    Li, Zheng; Zhang, Wei; Li, Yixuan; Su, Xianyue

    2008-02-01

    In this paper, continuous wavelet transform has been performed to extract the inner crack information from the guided waves in cantilever beams, and the location and size of crack can be detected exactly. Considering its best time-frequency property, Gabor continuous wavelet transform is employed to analyze the complicated flexible wave signals in cantilever beam, which is inspirited by an impact on the free end. Otherwise, in order to enhance the sensitivity of detection for some small cracks, an improved method is discussed. Here, both computational and experimental methods are carried out for comparing the influence of different crack location in beam. Therefore, the method proposed can be expected to expand to a powerful damage detection method in a broad engineering application.

  11. Method of Fault Detection and Rerouting

    NASA Technical Reports Server (NTRS)

    Medelius, Pedro J. (Inventor); Gibson, Tracy L. (Inventor); Lewis, Mark E. (Inventor)

    2013-01-01

    A system and method for detecting damage in an electrical wire, including delivering at least one test electrical signal to an outer electrically conductive material in a continuous or non-continuous layer covering an electrically insulative material layer that covers an electrically conductive wire core. Detecting the test electrical signals in the outer conductive material layer to obtain data that is processed to identify damage in the outer electrically conductive material layer.

  12. Automated macromolecular crystal detection system and method

    DOEpatents

    Christian, Allen T.; Segelke, Brent; Rupp, Bernard; Toppani, Dominique

    2007-06-05

    An automated macromolecular method and system for detecting crystals in two-dimensional images, such as light microscopy images obtained from an array of crystallization screens. Edges are detected from the images by identifying local maxima of a phase congruency-based function associated with each image. The detected edges are segmented into discrete line segments, which are subsequently geometrically evaluated with respect to each other to identify any crystal-like qualities such as, for example, parallel lines, facing each other, similarity in length, and relative proximity. And from the evaluation a determination is made as to whether crystals are present in each image.

  13. Three Methods of Detection of Hydrazines

    NASA Technical Reports Server (NTRS)

    Griffin, Timothy; Berger, Cristina

    2010-01-01

    Three proposed methods for measuring trace quantities of hydrazines involve ionization and detection of hydrazine derivatives. These methods are intended to overcome the limitations of prior hydrazine- detection methods. Hydrazine (Hz), monomethylhydrazine (MMH), and unsymmetrical dimethylhydrazine (UDMH) are hypergolic fuels and are highly reactive, toxic, and corrosive. A capability to measure concentrations of hydrazines is desirable for detecting leaks and ensuring safety in aerospace settings and in some industrial settings in which these compounds are used. One of the properties (high reactivity) that make it desirable to detect trace amounts of hydrazines also makes it difficult to detect hydrazines and measure their concentrations accurately using prior methods: significant amounts are lost to thermal and catalytic decomposition prior to detection. Further complications arise from the sticky nature of hydrazines: Sample hydrazine molecules tend to become irreversibly adsorbed onto solid surfaces with which they come into contact during transport to detectors, giving rise to drift in detector responses. In each proposed method, the reactive, sticky nature of hydrazines would be turned to advantage by providing a suitably doped substrate surface with which the hydrazines would react. The resulting hydrazine derivatives would be sufficiently less sticky and sufficiently more stable so that fewer molecules would be lost to decomposition or adsorption during transport. Consequently, it would be possible to measure concentration with more sensitivity and less error than in prior techniques. The first proposed method calls for the use of a recently developed technique known as desorption electrospray ionization (DESI), in which a pneumatically assisted micro -electrospray at ambient pressure is directed at a surface of interest. In this case, the surface of interest would be that of a substrate described above.

  14. Apparatus and methods for detecting chemical permeation

    DOEpatents

    Vo-Dinh, T.

    1994-12-27

    Apparatus and methods for detecting the permeation of hazardous or toxic chemicals through protective clothing are disclosed. The hazardous or toxic chemicals of interest do not possess the spectral characteristic of luminescence. The apparatus and methods utilize a spectrochemical modification technique to detect the luminescence quenching of an indicator compound which upon permeation of the chemical through the protective clothing, the indicator is exposed to the chemical, thus indicating chemical permeation. The invention also relates to the fabrication of protective clothing materials. 13 figures.

  15. Novel methods for detecting buried explosive devices

    SciTech Connect

    Kercel, S.W.; Burlage, R.S.; Patek, D.R.; Smith, C.M.; Hibbs, A.D.; Rayner, T.J.

    1997-04-01

    Oak Ridge National Laboratory (ORNL) and Quantum Magnetics, Inc. (QM) are exploring novel landmine detection technologies. Technologies considered here include bioreporter bacteria, swept acoustic resonance, nuclear quadrupole resonance (NQR), and semiotic data fusion. Bioreporter bacteria look promising for third-world humanitarian applications; they are inexpensive, and deployment does not require high-tech methods. Swept acoustic resonance may be a useful adjunct to magnetometers in humanitarian demining. For military demining, NQR is a promising method for detecting explosive substances; of 50,000 substances that have been tested, none has an NQR signature that can be mistaken for RDX or TNT. For both military and commercial demining, sensor fusion entails two daunting tasks, identifying fusible features in both present-day and emerging technologies, and devising a fusion algorithm that runs in real-time on cheap hardware. Preliminary research in these areas is encouraging. A bioreporter bacterium for TNT detection is under development. Investigation has just started in swept acoustic resonance as an approach to a cheap mine detector for humanitarian use. Real-time wavelet processing appears to be a key to extending NQR bomb detection into mine detection, including TNT-based mines. Recent discoveries in semiotics may be the breakthrough that will lead to a robust fused detection scheme.

  16. Novel methods for detecting buried explosive devices

    NASA Astrophysics Data System (ADS)

    Kercel, Stephen W.; Burlage, Robert S.; Patek, David R.; Smith, Cyrus M.; Hibbs, Andrew D.; Rayner, Timothy J.

    1997-07-01

    Oak Ridge National Laboratory and Quantum Magnetics, Inc. are exploring novel landmine detection technologies. Technologies considered here include bioreporter bacteria, swept acoustic resonance, nuclear quadrupole resonance (NQR), and semiotic data fusion. Bioreporter bacteria look promising for third-world humanitarian applications; they are inexpensive, and deployment does not require high-tech methods. Swept acoustic resonance may be a useful adjunct to magnetometers in humanitarian demining. For military demining, NQR is a promising method for detecting explosive substances; of 50,000 substances that have been tested, one has an NQR signature that can be mistaken for RDX or TNT. For both military and commercial demining, sensor fusion entails two daunting tasks, identifying fusible features in both present-day and emerging technologies, and devising a fusion algorithm that runs in real-time on cheap hardware. Preliminary research in these areas is encouraging. A bioreporter bacterium for TNT detection is under development. Investigation has just started in swept acoustic resonance as an approach to a cheap mine detector for humanitarian use. Real-time wavelet processing appears to be a key to extending NQR bomb detection into mine detection, including TNT-based mines. Recent discoveries in semiotics may be the breakthrough that will lead to a robust fused detection scheme.

  17. Flow cytometric detection method for DNA samples

    DOEpatents

    Nasarabadi, Shanavaz; Langlois, Richard G.; Venkateswaran, Kodumudi S.

    2006-08-01

    Disclosed herein are two methods for rapid multiplex analysis to determine the presence and identity of target DNA sequences within a DNA sample. Both methods use reporting DNA sequences, e.g., modified conventional Taqman.RTM. probes, to combine multiplex PCR amplification with microsphere-based hybridization using flow cytometry means of detection. Real-time PCR detection can also be incorporated. The first method uses a cyanine dye, such as, Cy3.TM., as the reporter linked to the 5' end of a reporting DNA sequence. The second method positions a reporter dye, e.g., FAM, on the 3' end of the reporting DNA sequence and a quencher dye, e.g., TAMRA, on the 5' end.

  18. Flow cytometric detection method for DNA samples

    DOEpatents

    Nasarabadi,Shanavaz; Langlois, Richard G.; Venkateswaran, Kodumudi S.

    2011-07-05

    Disclosed herein are two methods for rapid multiplex analysis to determine the presence and identity of target DNA sequences within a DNA sample. Both methods use reporting DNA sequences, e.g., modified conventional Taqman.RTM. probes, to combine multiplex PCR amplification with microsphere-based hybridization using flow cytometry means of detection. Real-time PCR detection can also be incorporated. The first method uses a cyanine dye, such as, Cy3.TM., as the reporter linked to the 5' end of a reporting DNA sequence. The second method positions a reporter dye, e.g., FAM.TM. on the 3' end of the reporting DNA sequence and a quencher dye, e.g., TAMRA.TM., on the 5' end.

  19. Method for detecting gas turbine engine flashback

    DOEpatents

    Singh, Kapil Kumar; Varatharajan, Balachandar; Kraemer, Gilbert Otto; Yilmaz, Ertan; Lacy, Benjamin Paul

    2012-09-04

    A method for monitoring and controlling a gas turbine, comprises predicting frequencies of combustion dynamics in a combustor using operating conditions of a gas turbine, receiving a signal from a sensor that is indicative of combustion dynamics in the combustor, and detecting a flashback if a frequency of the received signal does not correspond to the predicted frequencies.

  20. Method and apparatus for detecting an analyte

    DOEpatents

    Allendorf, Mark D.; Hesketh, Peter J.

    2011-11-29

    We describe the use of coordination polymers (CP) as coatings on microcantilevers for the detection of chemical analytes. CP exhibit changes in unit cell parameters upon adsorption of analytes, which will induce a stress in a static microcantilever upon which a CP layer is deposited. We also describe fabrication methods for depositing CP layers on surfaces.

  1. Improved astigmatic focus error detection method

    NASA Technical Reports Server (NTRS)

    Bernacki, Bruce E.

    1992-01-01

    All easy-to-implement focus- and track-error detection methods presently used in magneto-optical (MO) disk drives using pre-grooved media suffer from a side effect known as feedthrough. Feedthrough is the unwanted focus error signal (FES) produced when the optical head is seeking a new track, and light refracted from the pre-grooved disk produces an erroneous FES. Some focus and track-error detection methods are more resistant to feedthrough, but tend to be complicated and/or difficult to keep in alignment as a result of environmental insults. The astigmatic focus/push-pull tracking method is an elegant, easy-to-align focus- and track-error detection method. Unfortunately, it is also highly susceptible to feedthrough when astigmatism is present, with the worst effects caused by astigmatism oriented such that the tangential and sagittal foci are at 45 deg to the track direction. This disclosure outlines a method to nearly completely eliminate the worst-case form of feedthrough due to astigmatism oriented 45 deg to the track direction. Feedthrough due to other primary aberrations is not improved, but performance is identical to the unimproved astigmatic method.

  2. Intrusion detection using pattern recognition methods

    NASA Astrophysics Data System (ADS)

    Jiang, Nan; Yu, Li

    2007-09-01

    Today, cyber attacks such as worms, scanning, active attackers are pervasive in Internet. A number of security approaches are proposed to address this problem, among which the intrusion detection system (IDS) appears to be one of the major and most effective solutions for defending against malicious users. Essentially, intrusion detection problem can be generalized as a classification problem, whose goal is to distinguish normal behaviors and anomalies. There are many well-known pattern recognition algorithms for classification purpose. In this paper we describe the details of applying pattern recognition methods to the intrusion detection research field. Experimenting on the KDDCUP 99 data set, we first use information gain metric to reduce the dimensionality of the original feature space. Two supervised methods, the support vector machine as well as the multi-layer neural network have been tested and the results display high detection rate and low false alarm rate, which is promising for real world applications. In addition, three unsupervised methods, Single-Linkage, K-Means, and CLIQUE, are also implemented and evaluated in the paper. The low computational complexity reveals their application in initial data reduction process.

  3. Method and system for detecting an explosive

    DOEpatents

    Reber, Edward L.; Rohde, Kenneth W.; Blackwood, Larry G.

    2010-12-07

    A method and system for detecting at least one explosive in a vehicle using a neutron generator and a plurality of NaI detectors. Spectra read from the detectors is calibrated by performing Gaussian peak fitting to define peak regions, locating a Na peak and an annihilation peak doublet, assigning a predetermined energy level to one peak in the doublet, and predicting a hydrogen peak location based on a location of at least one peak of the doublet. The spectra are gain shifted to a common calibration, summed for respective groups of NaI detectors, and nitrogen detection analysis performed on the summed spectra for each group.

  4. Detection methods for centrifugal microfluidic platforms.

    PubMed

    Burger, Robert; Amato, Letizia; Boisen, Anja

    2016-02-15

    Centrifugal microfluidics has attracted much interest from academia as well as industry, since it potentially offers solutions for affordable, user-friendly and portable biosensing. A wide range of so-called fluidic unit operations, e.g. mixing, metering, liquid routing, and particle separation, have been developed and allow automation and integration of complex assay protocols in lab-on-a-disc systems. Besides liquid handling, the detection strategy for reading out the assay is crucial for developing a fully integrated system. In this review, we focus on biosensors and readout methods for the centrifugal microfluidics platform and cover optical as well as mechanical and electrical detection principles.

  5. A novel method for detection of apoptosis

    SciTech Connect

    Zagariya, Alexander M.

    2012-04-15

    There are two different Angiotensin II (ANG II) peptides in nature: Human type (ANG II) and Bovine type (ANG II*). These eight amino acid peptides differ only at position 5 where Valine is replaced by Isoleucine in the Bovine type. They are present in all species studied so far. These amino acids are different by only one atom of carbon. This difference is so small, that it will allow any of ANG II, Bovine or Human antibodies to interact with all species and create a universal method for apoptosis detection. ANG II concentrations are found at substantially higher levels in apoptotic, compared to non-apoptotic, tissues. ANG II accumulation can lead to DNA damage, mutations, carcinogenesis and cell death. We demonstrate that Bovine antiserum can be used for universal detection of apoptosis. In 2010, the worldwide market for apoptosis detection reached the $20 billion mark and significantly increases each year. Most commercially available methods are related to Annexin V and TUNNEL. Our new method based on ANG II is more widely known to physicians and scientists compared to previously used methods. Our approach offers a novel alternative for assessing apoptosis activity with enhanced sensitivity, at a lower cost and ease of use.

  6. Need for new caries detection methods

    NASA Astrophysics Data System (ADS)

    Young, Douglas A.; Featherstone, John D. B.

    1999-05-01

    Dental caries (tooth decay) continues to be a major problems for adults as well as children, even though great advances have been made in preventive methods in the last 20 years. New methods for the management of caries will work best if lesions can be detected at an early stage and chemical rather than physical intervention can take place, thereby preserving the natural tooth structure and helping the saliva to heal, or remineralize, the areas of early decay. Clinical detection of caries in the US relies on visual examination, tactile with hand held explorer, and conventional radiographs, all of which are inadequate for the occlusal (biting) surfaces of the teeth where most of the decay now occurs. The dentist often has to explore by drilling with a dental bur to confirm early decay in these areas. New method that can determine the extent and degree of subsurface lesions in these surfaces non-destructively are essential for further advances in the clinical management of dental caries. Optical methods, which exploit the differences between sound and carious enamel and dentin, show great promise for the accurate detection of these lesions. Two or three- dimensional images, which include a measure of severity will be needed.

  7. Research and Design of Rootkit Detection Method

    NASA Astrophysics Data System (ADS)

    Liu, Leian; Yin, Zuanxing; Shen, Yuli; Lin, Haitao; Wang, Hongjiang

    Rootkit is one of the most important issues of network communication systems, which is related to the security and privacy of Internet users. Because of the existence of the back door of the operating system, a hacker can use rootkit to attack and invade other people's computers and thus he can capture passwords and message traffic to and from these computers easily. With the development of the rootkit technology, its applications are more and more extensive and it becomes increasingly difficult to detect it. In addition, for various reasons such as trade secrets, being difficult to be developed, and so on, the rootkit detection technology information and effective tools are still relatively scarce. In this paper, based on the in-depth analysis of the rootkit detection technology, a new kind of the rootkit detection structure is designed and a new method (software), X-Anti, is proposed. Test results show that software designed based on structure proposed is much more efficient than any other rootkit detection software.

  8. Lifting wavelet method of target detection

    NASA Astrophysics Data System (ADS)

    Han, Jun; Zhang, Chi; Jiang, Xu; Wang, Fang; Zhang, Jin

    2009-11-01

    Image target recognition plays a very important role in the areas of scientific exploration, aeronautics and space-to-ground observation, photography and topographic mapping. Complex environment of the image noise, fuzzy, all kinds of interference has always been to affect the stability of recognition algorithm. In this paper, the existence of target detection in real-time, accuracy problems, as well as anti-interference ability, using lifting wavelet image target detection methods. First of all, the use of histogram equalization, the goal difference method to obtain the region, on the basis of adaptive threshold and mathematical morphology operations to deal with the elimination of the background error. Secondly, the use of multi-channel wavelet filter wavelet transform of the original image de-noising and enhancement, to overcome the general algorithm of the noise caused by the sensitive issue of reducing the rate of miscarriage of justice will be the multi-resolution characteristics of wavelet and promotion of the framework can be designed directly in the benefits of space-time region used in target detection, feature extraction of targets. The experimental results show that the design of lifting wavelet has solved the movement of the target due to the complexity of the context of the difficulties caused by testing, which can effectively suppress noise, and improve the efficiency and speed of detection.

  9. Detecting data anomalies methods in distributed systems

    NASA Astrophysics Data System (ADS)

    Mosiej, Lukasz

    2009-06-01

    Distributed systems became most popular systems in big companies. Nowadays many telecommunications companies want to hold large volumes of data about all customers. Obviously, those data cannot be stored in single database because of many technical difficulties, such as data access efficiency, security reasons, etc. On the other hand there is no need to hold all data in one place, because companies already have dedicated systems to perform specific tasks. In the distributed systems there is a redundancy of data and each system holds only interesting data in appropriate form. Data updated in one system should be also updated in the rest of systems, which hold that data. There are technical problems to update those data in all systems in transactional way. This article is about data anomalies in distributed systems. Avail data anomalies detection methods are shown. Furthermore, a new initial concept of new data anomalies detection methods is described on the last section.

  10. System and method for anomaly detection

    DOEpatents

    Scherrer, Chad

    2010-06-15

    A system and method for detecting one or more anomalies in a plurality of observations is provided. In one illustrative embodiment, the observations are real-time network observations collected from a stream of network traffic. The method includes performing a discrete decomposition of the observations, and introducing derived variables to increase storage and query efficiencies. A mathematical model, such as a conditional independence model, is then generated from the formatted data. The formatted data is also used to construct frequency tables which maintain an accurate count of specific variable occurrence as indicated by the model generation process. The formatted data is then applied to the mathematical model to generate scored data. The scored data is then analyzed to detect anomalies.

  11. Surface property detection apparatus and method

    DOEpatents

    Martens, Jon S.; Ginley, David S.; Hietala, Vincent M.; Sorensen, Neil R.

    1995-01-01

    Apparatus and method for detecting, determining, and imaging surface resistance corrosion, thin film growth, and oxide formation on the surface of conductors or other electrical surface modification. The invention comprises a modified confocal resonator structure with the sample remote from the radiating mirror. Surface resistance is determined by analyzing and imaging reflected microwaves; imaging reveals anomalies due to surface impurities, non-stoichiometry, and the like, in the surface of the superconductor, conductor, dielectric, or semiconductor.

  12. Surface property detection apparatus and method

    DOEpatents

    Martens, J.S.; Ginley, D.S.; Hietala, V.M.; Sorensen, N.R.

    1995-08-08

    Apparatus and method for detecting, determining, and imaging surface resistance corrosion, thin film growth, and oxide formation on the surface of conductors or other electrical surface modification. The invention comprises a modified confocal resonator structure with the sample remote from the radiating mirror. Surface resistance is determined by analyzing and imaging reflected microwaves; imaging reveals anomalies due to surface impurities, non-stoichiometry, and the like, in the surface of the superconductor, conductor, dielectric, or semiconductor. 4 figs.

  13. Detection Method of TOXOPLASMA GONDII Tachyzoites

    NASA Astrophysics Data System (ADS)

    Eassa, Souzan; Bose, Chhanda; Alusta, Pierre; Tarasenko, Olga

    2011-06-01

    Tachyzoites are considered to be the most important stage of Toxoplasma gondii which causes toxoplasmosis. T. gondii is, an obligate intracellular parasite which infects a wide range of cells. The present study was designed to develop a method for an early detection of T. gondii tachyzoites. The method comprised of a binding assay which was analyzed using principal component and cluster analysis. Our data showed that glycoconjugates GC1, GC2, GC3 and GC10 exhibit a significantly higher binding affinity for T. gondii tachyzoites as compared to controls (T. gondii only, PAA only, GC 1, 2, 3, and 10 only).

  14. Improved method for detection of starch hydrolysis

    SciTech Connect

    Ohawale, M.R.; Wilson, J.J.; Khachatourians, G.G.; Ingledew, W.M.

    1982-09-01

    A new starch hydrolysis detection method which does not rely on iodine staining or the use of color-complexed starch is described. A linear relationship was obtained with agar-starch plates when net clearing zones around colonies of yeasts were plotted against enzyme levels (semilogarithm scale) produced by the same yeast strains in liquid medium. A similar relationship between starch clearing zones and alpha-amylase levels from three different sources was observed. These observations suggest that the method is useful in mutant isolations, strain improvement programs, and the prediction of alpha-amylase activities in culture filtrates or column effluents. (Refs. 18).

  15. A new IQ detection method for LLRF

    NASA Astrophysics Data System (ADS)

    Qiu, Feng; Gao, Jie; Lin, Hai-ying; Liu, Rong; Ma, Xin-peng; Sha, Peng; Sun, Yi; Wang, Guang-wei; Wang, Qun-yao; Xu, Bo; Zeng, Ri-hua

    2012-05-01

    Digital LLRF technology has been widely used in new generation particle accelerators. IF quadrature sampling is a common method for amplitude and phase detection. Many strategies, which obey the same rule of fsample=(M/N)fIF (M/N is a rational number), have been proposed to reduce the effects of spectrum aliasing. However, we found that M/N does not need to be a rational number according to Shannon's theorem. Therefore, we propose a new IQ detection method in this paper. This method is based on a special IIR filter which is derived from an RLC circuit. The unique characteristic of the method is that the value of fIF is independent of the value of fsample. We have set up an experimental platform to verify our method. A 122.88 MHz sampling clock is used to sample a 3 MHz IF signal. The DDS and PI control techniques are used to realize the closed-loop control. Results show that the stability of the system is within ± 0.05% (peak to peak) for the amplitude, and with ±0.03° (peak to peak) for the phase in 5 h.

  16. Waterborne Pathogens: Detection Methods and Challenges

    PubMed Central

    Ramírez-Castillo, Flor Yazmín; Loera-Muro, Abraham; Jacques, Mario; Garneau, Philippe; Avelar-González, Francisco Javier; Harel, Josée; Guerrero-Barrera, Alma Lilián

    2015-01-01

    Waterborne pathogens and related diseases are a major public health concern worldwide, not only by the morbidity and mortality that they cause, but by the high cost that represents their prevention and treatment. These diseases are directly related to environmental deterioration and pollution. Despite the continued efforts to maintain water safety, waterborne outbreaks are still reported globally. Proper assessment of pathogens on water and water quality monitoring are key factors for decision-making regarding water distribution systems’ infrastructure, the choice of best water treatment and prevention waterborne outbreaks. Powerful, sensitive and reproducible diagnostic tools are developed to monitor pathogen contamination in water and be able to detect not only cultivable pathogens but also to detect the occurrence of viable but non-culturable microorganisms as well as the presence of pathogens on biofilms. Quantitative microbial risk assessment (QMRA) is a helpful tool to evaluate the scenarios for pathogen contamination that involve surveillance, detection methods, analysis and decision-making. This review aims to present a research outlook on waterborne outbreaks that have occurred in recent years. This review also focuses in the main molecular techniques for detection of waterborne pathogens and the use of QMRA approach to protect public health. PMID:26011827

  17. Waterborne pathogens: detection methods and challenges.

    PubMed

    Ramírez-Castillo, Flor Yazmín; Loera-Muro, Abraham; Jacques, Mario; Garneau, Philippe; Avelar-González, Francisco Javier; Harel, Josée; Guerrero-Barrera, Alma Lilián

    2015-01-01

    Waterborne pathogens and related diseases are a major public health concern worldwide, not only by the morbidity and mortality that they cause, but by the high cost that represents their prevention and treatment. These diseases are directly related to environmental deterioration and pollution. Despite the continued efforts to maintain water safety, waterborne outbreaks are still reported globally. Proper assessment of pathogens on water and water quality monitoring are key factors for decision-making regarding water distribution systems' infrastructure, the choice of best water treatment and prevention waterborne outbreaks. Powerful, sensitive and reproducible diagnostic tools are developed to monitor pathogen contamination in water and be able to detect not only cultivable pathogens but also to detect the occurrence of viable but non-culturable microorganisms as well as the presence of pathogens on biofilms. Quantitative microbial risk assessment (QMRA) is a helpful tool to evaluate the scenarios for pathogen contamination that involve surveillance, detection methods, analysis and decision-making. This review aims to present a research outlook on waterborne outbreaks that have occurred in recent years. This review also focuses in the main molecular techniques for detection of waterborne pathogens and the use of QMRA approach to protect public health. PMID:26011827

  18. Waterborne pathogens: detection methods and challenges.

    PubMed

    Ramírez-Castillo, Flor Yazmín; Loera-Muro, Abraham; Jacques, Mario; Garneau, Philippe; Avelar-González, Francisco Javier; Harel, Josée; Guerrero-Barrera, Alma Lilián

    2015-05-21

    Waterborne pathogens and related diseases are a major public health concern worldwide, not only by the morbidity and mortality that they cause, but by the high cost that represents their prevention and treatment. These diseases are directly related to environmental deterioration and pollution. Despite the continued efforts to maintain water safety, waterborne outbreaks are still reported globally. Proper assessment of pathogens on water and water quality monitoring are key factors for decision-making regarding water distribution systems' infrastructure, the choice of best water treatment and prevention waterborne outbreaks. Powerful, sensitive and reproducible diagnostic tools are developed to monitor pathogen contamination in water and be able to detect not only cultivable pathogens but also to detect the occurrence of viable but non-culturable microorganisms as well as the presence of pathogens on biofilms. Quantitative microbial risk assessment (QMRA) is a helpful tool to evaluate the scenarios for pathogen contamination that involve surveillance, detection methods, analysis and decision-making. This review aims to present a research outlook on waterborne outbreaks that have occurred in recent years. This review also focuses in the main molecular techniques for detection of waterborne pathogens and the use of QMRA approach to protect public health.

  19. Detection of Respiratory Viruses by Molecular Methods

    PubMed Central

    Mahony, James B.

    2008-01-01

    Summary: Clinical laboratories historically diagnose seven or eight respiratory virus infections using a combination of techniques including enzyme immunoassay, direct fluorescent antibody staining, cell culture, and nucleic acid amplification tests. With the discovery of six new respiratory viruses since 2000, laboratories are faced with the challenge of detecting up to 19 different viruses that cause acute respiratory disease of both the upper and lower respiratory tracts. The application of nucleic acid amplification technology, particularly multiplex PCR coupled with fluidic or fixed microarrays, provides an important new approach for the detection of multiple respiratory viruses in a single test. These multiplex amplification tests provide a sensitive and comprehensive approach for the diagnosis of respiratory tract infections in individual hospitalized patients and the identification of the etiological agent in outbreaks of respiratory tract infection in the community. This review describes the molecular methods used to detect respiratory viruses and discusses the contribution that molecular testing, especially multiplex PCR, has made to our ability to detect respiratory viruses and to increase our understanding of the roles of various viral agents in acute respiratory disease. PMID:18854489

  20. Current methods for detecting ethylene in plants

    PubMed Central

    Cristescu, Simona M.; Mandon, Julien; Arslanov, Denis; De Pessemier, Jérôme; Hermans, Christian; Harren, Frans J. M.

    2013-01-01

    Background In view of ethylene's critical developmental and physiological roles the gaseous hormone remains an active research topic for plant biologists. Progress has been made to understand the ethylene biosynthesis pathway and the mechanisms of perception and action. Still numerous questions need to be answered and findings to be validated. Monitoring gas production will very often complete the picture of any ethylene research topic. Therefore the search for suitable ethylene measuring methods for various plant samples either in the field, greenhouses, laboratories or storage facilities is strongly motivated. Scope This review presents an update of the current methods for ethylene monitoring in plants. It focuses on the three most-used methods – gas chromatography detection, electrochemical sensing and optical detection – and compares them in terms of sensitivity, selectivity, time response and price. Guidelines are provided for proper selection and application of the described sensor methodologies and some specific applications are illustrated of laser-based detector for monitoring ethylene given off by Arabidopsis thaliana upon various nutritional treatments. Conclusions Each method has its advantages and limitations. The choice for the suitable ethylene sensor needs careful consideration and is driven by the requirements for a specific application. PMID:23243188

  1. Sensing Methods for Detecting Analog Television Signals

    NASA Astrophysics Data System (ADS)

    Rahman, Mohammad Azizur; Song, Chunyi; Harada, Hiroshi

    This paper introduces a unified method of spectrum sensing for all existing analog television (TV) signals including NTSC, PAL and SECAM. We propose a correlation based method (CBM) with a single reference signal for sensing any analog TV signals. In addition we also propose an improved energy detection method. The CBM approach has been implemented in a hardware prototype specially designed for participating in Singapore TV white space (WS) test trial conducted by Infocomm Development Authority (IDA) of the Singapore government. Analytical and simulation results of the CBM method will be presented in the paper, as well as hardware testing results for sensing various analog TV signals. Both AWGN and fading channels will be considered. It is shown that the theoretical results closely match with those from simulations. Sensing performance of the hardware prototype will also be presented in fading environment by using a fading simulator. We present performance of the proposed techniques in terms of probability of false alarm, probability of detection, sensing time etc. We also present a comparative study of the various techniques.

  2. Novelty detection using level set methods.

    PubMed

    Ding, Xuemei; Li, Yuhua; Belatreche, Ammar; Maguire, Liam P

    2015-03-01

    This paper presents a level set boundary description (LSBD) approach for novelty detection that treats the nonlinear boundary directly in the input space. The proposed approach consists of level set function (LSF) construction, boundary evolution, and termination of the training process. It employs kernel density estimation to construct the LSF of the initial boundary for the training data set. Then, a sign of the LSF-based algorithm is proposed to evolve the boundary and make it fit more tightly in the data distribution. The training process terminates when an expected fraction of rejected normal data is reached. The evolution process utilizes the signs of the LSF values at all training data points to decide whether to expand or shrink the boundary. Extensive experiments are conducted on benchmark data sets to evaluate the proposed LSBD method and compare it against four representative novelty detection methods. The experimental results demonstrate that the novelty detector modeled with the proposed LSBD can effectively detect anomalies. PMID:25720011

  3. ULTRASONIC FLAW DETECTION METHOD AND MEANS

    DOEpatents

    Worlton, D.C.

    1961-08-15

    A method of detecting subsurface flaws in an object using ultrasonic waves is described. An ultnasonic wave of predetermined velocity and frequency is transmitted to engage the surface of the object at a predetermined angle of inci dence thereto. The incident angle of the wave to the surface is determined with respect to phase velocity, incident wave velocity, incident wave frequency, and the estimated depth of the flaw so that Lamb waves of a particular type and mode are induced only in the portion of the object between the flaw and the surface. These Lamb waves are then detected as they leave the object at an angle of exit equal to the angle of incidence. No waves wlll be generated in the object and hence received if no flaw exists beneath the surface. (AEC)

  4. Halocarbon refrigerant detection methods. Final report

    SciTech Connect

    Tapscott, R.E.; Sohn, C.W.

    1996-01-01

    The Montreal Protocol and the U.S. Clean Air Act limit the production of ozone-depleting substances, including many refrigerants. Three options for cost-effectively phasing out these refrigerants from Army installations are: (1) refrigerant containment, (2) retrofit conversion to accommodate alternative refrigerant, and (3) replacement with cooling systems using alternative refrigerant. This report contributes to the first option by identifying and assessing methods to detect chlorofluorocarbon (CFC), hydrochlorofluorocarbon (HCFC) and hydrofluorocarbon (HFC) refrigerants that leak from air-conditioning and refrigeration systems. As background, the report describes the relevant sections of the Montreal Protocol and the Clean Air Act, and gives an overview of refrigerants. This is followed by a description of the technologies used in refrigerant leak detection, and a survey of detector types available and their price ranges. Appendixes provide an extensive list of detector products and their specifications, plus manufacturer addresses and phone numbers.

  5. Method and apparatus for detecting neutrons

    DOEpatents

    Perkins, Richard W.; Reeder, Paul L.; Wogman, Ned A.; Warner, Ray A.; Brite, Daniel W.; Richey, Wayne C.; Goldman, Don S.

    1997-01-01

    The instant invention is a method for making and using an apparatus for detecting neutrons. Scintillating optical fibers are fabricated by melting SiO.sub.2 with a thermal neutron capturing substance and a scintillating material in a reducing atmosphere. The melt is then drawn into fibers in an anoxic atmosphere. The fibers may then be coated and used directly in a neutron detection apparatus, or assembled into a geometrical array in a second, hydrogen-rich, scintillating material such as a polymer. Photons generated by interaction with thermal neutrons are trapped within the coated fibers and are directed to photoelectric converters. A measurable electronic signal is generated for each thermal neutron interaction within the fiber. These electronic signals are then manipulated, stored, and interpreted by normal methods to infer the quality and quantity of incident radiation. When the fibers are arranged in an array within a second scintillating material, photons generated by kinetic neutrons interacting with the second scintillating material and photons generated by thermal neutron capture within the fiber can both be directed to photoelectric converters. These electronic signals are then manipulated, stored, and interpreted by normal methods to infer the quality and quantity of incident radiation.

  6. Method and apparatus for detecting neutrons

    DOEpatents

    Perkins, R.W.; Reeder, P.L.; Wogman, N.A.; Warner, R.A.; Brite, D.W.; Richey, W.C.; Goldman, D.S.

    1997-10-21

    The instant invention is a method for making and using an apparatus for detecting neutrons. Scintillating optical fibers are fabricated by melting SiO{sub 2} with a thermal neutron capturing substance and a scintillating material in a reducing atmosphere. The melt is then drawn into fibers in an anoxic atmosphere. The fibers may then be coated and used directly in a neutron detection apparatus, or assembled into a geometrical array in a second, hydrogen-rich, scintillating material such as a polymer. Photons generated by interaction with thermal neutrons are trapped within the coated fibers and are directed to photoelectric converters. A measurable electronic signal is generated for each thermal neutron interaction within the fiber. These electronic signals are then manipulated, stored, and interpreted by normal methods to infer the quality and quantity of incident radiation. When the fibers are arranged in an array within a second scintillating material, photons generated by kinetic neutrons interacting with the second scintillating material and photons generated by thermal neutron capture within the fiber can both be directed to photoelectric converters. These electronic signals are then manipulated, stored, and interpreted by normal methods to infer the quality and quantity of incident radiation. 5 figs.

  7. Bayesian Methods for Radiation Detection and Dosimetry

    SciTech Connect

    Peter G. Groer

    2002-09-29

    We performed work in three areas: radiation detection, external and internal radiation dosimetry. In radiation detection we developed Bayesian techniques to estimate the net activity of high and low activity radioactive samples. These techniques have the advantage that the remaining uncertainty about the net activity is described by probability densities. Graphs of the densities show the uncertainty in pictorial form. Figure 1 below demonstrates this point. We applied stochastic processes for a method to obtain Bayesian estimates of 222Rn-daughter products from observed counting rates. In external radiation dosimetry we studied and developed Bayesian methods to estimate radiation doses to an individual with radiation induced chromosome aberrations. We analyzed chromosome aberrations after exposure to gammas and neutrons and developed a method for dose-estimation after criticality accidents. The research in internal radiation dosimetry focused on parameter estimation for compartmental models from observed compartmental activities. From the estimated probability densities of the model parameters we were able to derive the densities for compartmental activities for a two compartment catenary model at different times. We also calculated the average activities and their standard deviation for a simple two compartment model.

  8. Method and apparatus for detecting explosives

    DOEpatents

    Moore, David Steven

    2011-05-10

    A method and apparatus is provided for detecting explosives by thermal imaging. The explosive material is subjected to a high energy wave which can be either a sound wave or an electromagnetic wave which will initiate a chemical reaction in the explosive material which chemical reaction will produce heat. The heat is then sensed by a thermal imaging device which will provide a signal to a computing device which will alert a user of the apparatus to the possibility of an explosive device being present.

  9. Dielectric detection by an electromagnetic cavity method

    NASA Astrophysics Data System (ADS)

    Weatherall, James C.; Beckley, Howard F.; Gatto, Joseph A.

    2004-09-01

    A method to screen for flammable and explosive materials in bottles by electromagnetic measurement is described. The technique makes use of an aluminum cavity having strong electromagnetic resonances in the radio wave band. An object inserted into the cavity changes the internal field configuration, and causes small, but measurable shifts in the resonant frequencies. The response depends on the electrical permittivity, or dielectric constant, of the material. By measuring the frequency change of many different cavity modes, the dielectric constant of the perturbing object can be inferred independently of the object's size and shape. We demonstrate the detection of materials in bottles using an experimental device.

  10. Systems and methods for detecting and processing

    DOEpatents

    Johnson, Michael M.; Yoshimura, Ann S.

    2006-03-28

    Embodiments of the present invention provides systems and method for detecting. Sensing modules are provided in communication with one or more detectors. In some embodiments, detectors are provided that are sensitive to chemical, biological, or radiological agents. Embodiments of sensing modules include processing capabilities to analyze, perform computations on, and/or run models to predict or interpret data received from one or more detectors. Embodiments of sensing modules form various network configurations with one another and/or with one or more data aggregation devices. Some embodiments of sensing modules include power management functionalities.

  11. Traumatic Brain Injury Detection Using Electrophysiological Methods

    PubMed Central

    Rapp, Paul E.; Keyser, David O.; Albano, Alfonso; Hernandez, Rene; Gibson, Douglas B.; Zambon, Robert A.; Hairston, W. David; Hughes, John D.; Krystal, Andrew; Nichols, Andrew S.

    2015-01-01

    Measuring neuronal activity with electrophysiological methods may be useful in detecting neurological dysfunctions, such as mild traumatic brain injury (mTBI). This approach may be particularly valuable for rapid detection in at-risk populations including military service members and athletes. Electrophysiological methods, such as quantitative electroencephalography (qEEG) and recording event-related potentials (ERPs) may be promising; however, the field is nascent and significant controversy exists on the efficacy and accuracy of the approaches as diagnostic tools. For example, the specific measures derived from an electroencephalogram (EEG) that are most suitable as markers of dysfunction have not been clearly established. A study was conducted to summarize and evaluate the statistical rigor of evidence on the overall utility of qEEG as an mTBI detection tool. The analysis evaluated qEEG measures/parameters that may be most suitable as fieldable diagnostic tools, identified other types of EEG measures and analysis methods of promise, recommended specific measures and analysis methods for further development as mTBI detection tools, identified research gaps in the field, and recommended future research and development thrust areas. The qEEG study group formed the following conclusions: (1) Individual qEEG measures provide limited diagnostic utility for mTBI. However, many measures can be important features of qEEG discriminant functions, which do show significant promise as mTBI detection tools. (2) ERPs offer utility in mTBI detection. In fact, evidence indicates that ERPs can identify abnormalities in cases where EEGs alone are non-disclosing. (3) The standard mathematical procedures used in the characterization of mTBI EEGs should be expanded to incorporate newer methods of analysis including non-linear dynamical analysis, complexity measures, analysis of causal interactions, graph theory, and information dynamics. (4) Reports of high specificity in q

  12. Leak and Pipe Detection Method and System

    NASA Technical Reports Server (NTRS)

    Youngquist, Robert C. (Inventor)

    2003-01-01

    A method and system for locating leaks of conductive fluids from non-conductive pipes and other structures or for locat- ing non-conductive pipes or structures having conductive fluid contained therein, employ a charge generator to apply a time varying charge to the conductive fluid, and a capaci- tive type detector that can detect the variable charge that is induced in the fluid. The capacitive detector, which prefer- ably includes a handheld housing, employs a large conduc- tive pickup plate that is used to locate the pipe or leak by scanning the plate over the ground and detecting the induced charge that is generated when the plate comes in close proximity to the pipe or leak. If a leak is encountered, the resulting signal will appear over an area larger than expected for a buried pipe, assuming the leak provides an electrically conductive path between the flow and the wet surrounding ground. The detector uses any suitable type of indicator device, such as a pair of headphones that enable an operator to hear the detected signal as a chirping sound, for example.

  13. Methods and Instruments for Fast Neutron Detection

    SciTech Connect

    Jordan, David V.; Reeder, Paul L.; Cooper, Matthew W.; McCormick, Kathleen R.; Peurrung, Anthony J.; Warren, Glen A.

    2005-05-01

    Pacific Northwest National Laboratory evaluated the performance of a large-area (~0.7 m2) plastic scintillator time-of-flight (TOF) sensor for direct detection of fast neutrons. This type of sensor is a readily area-scalable technology that provides broad-area geometrical coverage at a reasonably low cost. It can yield intrinsic detection efficiencies that compare favorably with moderator-based detection methods. The timing resolution achievable should permit substantially more precise time windowing of return neutron flux than would otherwise be possible with moderated detectors. The energy-deposition threshold imposed on each scintillator contributing to the event-definition trigger in a TOF system can be set to blind the sensor to direct emission from the neutron generator. The primary technical challenge addressed in the project was to understand the capabilities of a neutron TOF sensor in the limit of large scintillator area and small scintillator separation, a size regime in which the neutral particle’s flight path between the two scintillators is not tightly constrained.

  14. Radiation sensitive area detection device and method

    NASA Technical Reports Server (NTRS)

    Carter, Daniel C. (Inventor); Hecht, Diana L. (Inventor); Witherow, William K. (Inventor)

    1991-01-01

    A radiation sensitive area detection device for use in conjunction with an X ray, ultraviolet or other radiation source is provided which comprises a phosphor containing film which releases a stored diffraction pattern image in response to incoming light or other electromagnetic wave. A light source such as a helium-neon laser, an optical fiber capable of directing light from the laser source onto the phosphor film and also capable of channelling the fluoresced light from the phosphor film to an integrating sphere which directs the light to a signal processing means including a light receiving means such as a photomultiplier tube. The signal processing means allows translation of the fluoresced light in order to detect the original pattern caused by the diffraction of the radiation by the original sample. The optical fiber is retained directly in front of the phosphor screen by a thin metal holder which moves up and down across the phosphor screen and which features a replaceable pinhole which allows easy adjustment of the resolution of the light projected onto the phosphor film. The device produces near real time images with high spatial resolution and without the distortion that accompanies prior art devices employing photomultiplier tubes. A method is also provided for carrying out radiation area detection using the device of the invention.

  15. Lagrangian based methods for coherent structure detection.

    PubMed

    Allshouse, Michael R; Peacock, Thomas

    2015-09-01

    There has been a proliferation in the development of Lagrangian analytical methods for detecting coherent structures in fluid flow transport, yielding a variety of qualitatively different approaches. We present a review of four approaches and demonstrate the utility of these methods via their application to the same sample analytic model, the canonical double-gyre flow, highlighting the pros and cons of each approach. Two of the methods, the geometric and probabilistic approaches, are well established and require velocity field data over the time interval of interest to identify particularly important material lines and surfaces, and influential regions, respectively. The other two approaches, implementing tools from cluster and braid theory, seek coherent structures based on limited trajectory data, attempting to partition the flow transport into distinct regions. All four of these approaches share the common trait that they are objective methods, meaning that their results do not depend on the frame of reference used. For each method, we also present a number of example applications ranging from blood flow and chemical reactions to ocean and atmospheric flows. PMID:26428570

  16. Comparison of detection methods for vaginal lactobacilli.

    PubMed

    Smidt, I; Kiiker, R; Oopkaup, H; Lapp, E; Rööp, T; Truusalu, K; Štšepetova, J; Truu, J; Mändar, R

    2015-01-01

    Vaginal lactobacilli offer protection against microbiota imbalance and genitourinary tract infections. We compared vaginal lactobacilli in 50 Estonian women of child-bearing age applying culture-based methods, quantitative PCR and next-generation sequencing (NGS). The culture-based methods found three different lactobacilli: Lactobacillus crispatus, Lactobacillus jensenii and Lactobacillus gasseri. Using NGS revealed the presence of L. crispatus in 76%, Lactobacillus iners in 52%, L. jensenii in 47% and L. gasseri in 33% of the samples. According to qPCR, L. iners was present in 67% and L. crispatus in 64% of the samples. The proportions of L. crispatus revealed by qPCR and NGS were in good correlation (R=0.79, P<0.001), while that of L. iners correlated poorly (R=0.13, P>0.05). Good concordance for L. crispatus was also found between the results of the culture-based method and qPCR. Finally, good overlap between the results of the culture-based method and NGS was revealed: in case of a positive NGS result for L. crispatus, the same species was isolated in 95% of samples. The corresponding percentages were 82% for L. jensenii and 86% for L. gasseri. Our data indicate fairly general concordance of the three methods for detecting vaginal lactobacilli, except for L. iners. This points out the importance of standardisation of techniques, and the respective studies should involve cultures applying a medium suitable for the fastidious L. iners. PMID:25869280

  17. Platelet antibody: review of detection methods

    SciTech Connect

    Schwartz, K.A.

    1988-10-01

    The driving force behind development of in vitro methods for platelet antibodies is identification of plasma factors causing platelet destruction. Early methods relied on measurement of platelet activation. Current methods are more specific and use a purified antibody against immunoglobulin or complement, which is usually labeled with /sup 125/I or tagged with an enzyme or fluorescein. Comparisons of quantitation of platelet-associated IgG show wide variability between different methods. The disparate results can be related both to differences in binding of secondary antibodies to immunoglobulin in solution compared to immunoglobulins attached to platelets and to the improper assumption that the binding ratio between the secondary detecting and primary antiplatelet antibody is one. Most assays can 1) identify neonatal isoimmune thrombocytopenia and posttransfusion purpura, 2) help to differentiate between immune and nonimmune thrombocytopenias, 3) help to sort out the offending drug when drug-induced thrombocytopenia is suspected, and 4) identify platelet alloantibodies and potential platelet donors via a cross match assay for refractory patients. However, the advantages of quantitative assays over qualitative methods with respect to predictions of patients clinical course and response to different treatments remain to be investigated. 61 references.

  18. Comparison of detection methods for vaginal lactobacilli.

    PubMed

    Smidt, I; Kiiker, R; Oopkaup, H; Lapp, E; Rööp, T; Truusalu, K; Štšepetova, J; Truu, J; Mändar, R

    2015-01-01

    Vaginal lactobacilli offer protection against microbiota imbalance and genitourinary tract infections. We compared vaginal lactobacilli in 50 Estonian women of child-bearing age applying culture-based methods, quantitative PCR and next-generation sequencing (NGS). The culture-based methods found three different lactobacilli: Lactobacillus crispatus, Lactobacillus jensenii and Lactobacillus gasseri. Using NGS revealed the presence of L. crispatus in 76%, Lactobacillus iners in 52%, L. jensenii in 47% and L. gasseri in 33% of the samples. According to qPCR, L. iners was present in 67% and L. crispatus in 64% of the samples. The proportions of L. crispatus revealed by qPCR and NGS were in good correlation (R=0.79, P<0.001), while that of L. iners correlated poorly (R=0.13, P>0.05). Good concordance for L. crispatus was also found between the results of the culture-based method and qPCR. Finally, good overlap between the results of the culture-based method and NGS was revealed: in case of a positive NGS result for L. crispatus, the same species was isolated in 95% of samples. The corresponding percentages were 82% for L. jensenii and 86% for L. gasseri. Our data indicate fairly general concordance of the three methods for detecting vaginal lactobacilli, except for L. iners. This points out the importance of standardisation of techniques, and the respective studies should involve cultures applying a medium suitable for the fastidious L. iners.

  19. Lagrangian based methods for coherent structure detection

    SciTech Connect

    Allshouse, Michael R.; Peacock, Thomas

    2015-09-15

    There has been a proliferation in the development of Lagrangian analytical methods for detecting coherent structures in fluid flow transport, yielding a variety of qualitatively different approaches. We present a review of four approaches and demonstrate the utility of these methods via their application to the same sample analytic model, the canonical double-gyre flow, highlighting the pros and cons of each approach. Two of the methods, the geometric and probabilistic approaches, are well established and require velocity field data over the time interval of interest to identify particularly important material lines and surfaces, and influential regions, respectively. The other two approaches, implementing tools from cluster and braid theory, seek coherent structures based on limited trajectory data, attempting to partition the flow transport into distinct regions. All four of these approaches share the common trait that they are objective methods, meaning that their results do not depend on the frame of reference used. For each method, we also present a number of example applications ranging from blood flow and chemical reactions to ocean and atmospheric flows.

  20. Method and system for detecting explosives

    DOEpatents

    Reber, Edward L.; Jewell, James K.; Rohde, Kenneth W.; Seabury, Edward H.; Blackwood, Larry G.; Edwards, Andrew J.; Derr, Kurt W.

    2009-03-10

    A method of detecting explosives in a vehicle includes providing a first rack on one side of the vehicle, the rack including a neutron generator and a plurality of gamma ray detectors; providing a second rack on another side of the vehicle, the second rack including a neutron generator and a plurality of gamma ray detectors; providing a control system, remote from the first and second racks, coupled to the neutron generators and gamma ray detectors; using the control system, causing the neutron generators to generate neutrons; and performing gamma ray spectroscopy on spectra read by the gamma ray detectors to look for a signature indicative of presence of an explosive. Various apparatus and other methods are also provided.

  1. Nucleic acid detection system and method for detecting influenza

    DOEpatents

    Cai, Hong; Song, Jian

    2015-03-17

    The invention provides a rapid, sensitive and specific nucleic acid detection system which utilizes isothermal nucleic acid amplification in combination with a lateral flow chromatographic device, or DNA dipstick, for DNA-hybridization detection. The system of the invention requires no complex instrumentation or electronic hardware, and provides a low cost nucleic acid detection system suitable for highly sensitive pathogen detection. Hybridization to single-stranded DNA amplification products using the system of the invention provides a sensitive and specific means by which assays can be multiplexed for the detection of multiple target sequences.

  2. New method to detect caries via fluorescence

    NASA Astrophysics Data System (ADS)

    Eberhart, J.; Frentzen, M.; Thoms, M.

    2007-07-01

    Caries, a common and widespread infectious disease, has to be detected as early as possible. Based on the need for an easy and handy tool for preventing invasive treatment a new fluorescence camera system has been developed. Using this camera the so-called porphyrins, metabolic products of oral pathogenic bacteria can be visualized. Thereby fluorophores are excited at a wavelength of 405nm by the built-in GaN-LEDs. Healthy and diseased dental hard tissues fluoresce in the green and in the red spectral range, respectively, thus allowing differentiation by coulor. To prove the reliability of this fluorescence camera system, freshly extracted teeth were examined. Three different methods of analysis were verified and compared to give information about the lesions (sensitivity & selectivity): The extent of the fluorescence area, the integral of the red/green ratio of the lesion and the maximum red/green ratio in the area of interest. Histological sections of the teeth served as reference. In addition, the camera was compared to a tip probe sensor already available on the market. In total, our results show that regarding the three different algorithms of analysis, the maximum of the red/green ratio is a preferential method to evaluate carious lesions. Sound tissue, enamel caries and dentin caries can be clearly distinguished. The new fluorescence camera is a handy, efficient and fast device in order to detect lesions and seems to be superior to the tip probe sensor regarding the positioning. Further studies are required.

  3. Method and apparatus for vapor detection

    NASA Technical Reports Server (NTRS)

    Lerner, Melvin (Inventor); Hood, Lyal V. (Inventor); Rommel, Marjorie A. (Inventor); Pettitt, Bruce C. (Inventor); Erikson, Charles M. (Inventor)

    1980-01-01

    The method disclosed herein may be practiced by passing the vapors to be sampled along a path with halogen vapor, preferably chlorine vapor, heating the mixed vapors to halogenate those of the sampled vapors subject to halogenation, removing unreacted halogen vapor, and then sensing the vapors for organic halogenated compounds. The apparatus disclosed herein comprises means for flowing the vapors, both sample and halogen vapors, into a common path, means for heating the mixed vapors to effect the halogenation reaction, means for removing unreacted halogen vapor, and a sensing device for sensing halogenated compounds. By such a method and means, the vapors of low molecular weight hydrocarbons, ketones and alcohols, when present, such as methane, ethane, acetone, ethanol, and the like are converted, at least in part, to halogenated compounds, then the excess halogen removed or trapped, and the resultant vapors of the halogenated compounds sensed or detected. The system is highly sensitive. For example, acetone in a concentration of 30 parts per billion (volume) is readily detected.

  4. Efficient Computer Network Anomaly Detection by Changepoint Detection Methods

    NASA Astrophysics Data System (ADS)

    Tartakovsky, Alexander G.; Polunchenko, Aleksey S.; Sokolov, Grigory

    2013-02-01

    We consider the problem of efficient on-line anomaly detection in computer network traffic. The problem is approached statistically, as that of sequential (quickest) changepoint detection. A multi-cyclic setting of quickest change detection is a natural fit for this problem. We propose a novel score-based multi-cyclic detection algorithm. The algorithm is based on the so-called Shiryaev-Roberts procedure. This procedure is as easy to employ in practice and as computationally inexpensive as the popular Cumulative Sum chart and the Exponentially Weighted Moving Average scheme. The likelihood ratio based Shiryaev-Roberts procedure has appealing optimality properties, particularly it is exactly optimal in a multi-cyclic setting geared to detect a change occurring at a far time horizon. It is therefore expected that an intrusion detection algorithm based on the Shiryaev-Roberts procedure will perform better than other detection schemes. This is confirmed experimentally for real traces. We also discuss the possibility of complementing our anomaly detection algorithm with a spectral-signature intrusion detection system with false alarm filtering and true attack confirmation capability, so as to obtain a synergistic system.

  5. Odour Detection Methods: Olfactometry and Chemical Sensors

    PubMed Central

    Brattoli, Magda; de Gennaro, Gianluigi; de Pinto, Valentina; Loiotile, Annamaria Demarinis; Lovascio, Sara; Penza, Michele

    2011-01-01

    The complexity of the odours issue arises from the sensory nature of smell. From the evolutionary point of view olfaction is one of the oldest senses, allowing for seeking food, recognizing danger or communication: human olfaction is a protective sense as it allows the detection of potential illnesses or infections by taking into account the odour pleasantness/unpleasantness. Odours are mixtures of light and small molecules that, coming in contact with various human sensory systems, also at very low concentrations in the inhaled air, are able to stimulate an anatomical response: the experienced perception is the odour. Odour assessment is a key point in some industrial production processes (i.e., food, beverages, etc.) and it is acquiring steady importance in unusual technological fields (i.e., indoor air quality); this issue mainly concerns the environmental impact of various industrial activities (i.e., tanneries, refineries, slaughterhouses, distilleries, civil and industrial wastewater treatment plants, landfills and composting plants) as sources of olfactory nuisances, the top air pollution complaint. Although the human olfactory system is still regarded as the most important and effective “analytical instrument” for odour evaluation, the demand for more objective analytical methods, along with the discovery of materials with chemo-electronic properties, has boosted the development of sensor-based machine olfaction potentially imitating the biological system. This review examines the state of the art of both human and instrumental sensing currently used for the detection of odours. The olfactometric techniques employing a panel of trained experts are discussed and the strong and weak points of odour assessment through human detection are highlighted. The main features and the working principles of modern electronic noses (E-Noses) are then described, focusing on their better performances for environmental analysis. Odour emission monitoring carried out

  6. Hazard Detection Methods for Lunar Landing

    NASA Technical Reports Server (NTRS)

    Brady, Tye; Zimpfer, Doug; Robertson, Edward; Epp, Chirold; Paschall, Stephen

    2009-01-01

    The methods and experiences from the Apollo Program are fundamental building blocks for the development of lunar landing strategies for the Constellation Program. Each of the six lunar landing Apollo missions landed under near ideal lighting conditions. The astronauts visually performed terrain relative navigation while looking out of windows, and were greatly aided by external communication and well lit scenes. As the LM approached the landing site, the astronauts performed visual hazard detection and avoidance, also under near-ideal lighting conditions. The astronauts were looking out of the windows trying to the best of their ability to avoid rocks, slopes, and craters and find a safe landing location. NASA has expressed a desire for global lunar access for both crewed and robotic sortie lunar exploration missions (Cook, 2007) (Dale, 2006). Early NASA architecture studies have identified the lunar poles as desirable locations for early lunar missions. These polar missions have less than ideal lighting conditions and will significantly affect the way a crewed vehicle plans to land at such locales. Consequently, a variety of hazard identification methods should be considered for use by the crew to ensure a high degree of safety. This paper discusses such identification methods applicable to the poorly lit polar lunar environment, better ensuring global access for the soon to be designed Lunar Lander Vehicle (LLV).

  7. Method and system for turbomachinery surge detection

    DOEpatents

    Faymon, David K.; Mays, Darrell C.; Xiong, Yufei

    2004-11-23

    A method and system for surge detection within a gas turbine engine, comprises: measuring the compressor discharge pressure (CDP) of the gas turbine over a period of time; determining a time derivative (CDP.sub.D ) of the measured (CDP) correcting the CDP.sub.D for altitude, (CDP.sub.DCOR); estimating a short-term average of CDP.sub.DCOR.sup.2 ; estimating a short-term average of CDP.sub.DCOR ; and determining a short-term variance of corrected CDP rate of change (CDP.sub.roc) based upon the short-term average of CDP.sub.DCOR and the short-term average of CDP.sub.DCOR.sup.2. The method and system then compares the short-term variance of corrected CDP rate of change with a pre-determined threshold (CDP.sub.proc) and signals an output when CDP.sub.roc >CDP.sub.proc. The method and system provides a signal of a surge within the gas turbine engine when CDP.sub.roc remains>CDP.sub.proc for pre-determined period of time.

  8. Liquid chromatography detection unit, system, and method

    SciTech Connect

    Derenzo, Stephen E.; Moses, William W.

    2015-10-27

    An embodiment of a liquid chromatography detection unit includes a fluid channel and a radiation detector. The radiation detector is operable to image a distribution of a radiolabeled compound as the distribution travels along the fluid channel. An embodiment of a liquid chromatography system includes an injector, a separation column, and a radiation detector. The injector is operable to inject a sample that includes a radiolabeled compound into a solvent stream. The position sensitive radiation detector is operable to image a distribution of the radiolabeled compound as the distribution travels along a fluid channel. An embodiment of a method of liquid chromatography includes injecting a sample that comprises radiolabeled compounds into a solvent. The radiolabeled compounds are then separated. A position sensitive radiation detector is employed to image distributions of the radiolabeled compounds as the radiolabeled compounds travel along a fluid channel.

  9. Solar cell anomaly detection method and apparatus

    NASA Technical Reports Server (NTRS)

    Miller, Emmett L. (Inventor); Shumka, Alex (Inventor); Gauthier, Michael K. (Inventor)

    1981-01-01

    A method is provided for detecting cracks and other imperfections in a solar cell, which includes scanning a narrow light beam back and forth across the cell in a raster pattern, while monitoring the electrical output of the cell to find locations where the electrical output varies significantly. The electrical output can be monitored on a television type screen containing a raster pattern with each point on the screen corresponding to a point on the solar cell surface, and with the brightness of each point on the screen corresponding to the electrical output from the cell which was produced when the light beam was at the corresponding point on the cell. The technique can be utilized to scan a large array of interconnected solar cells, to determine which ones are defective.

  10. Systems and methods for detecting neutrons

    DOEpatents

    Bross, Alan D.; Mellott, Kerry L.; Pla-Dalmau, Anna

    2005-08-09

    Systems and methods for detecting neutrons. One or more neutron-sensitive scintillators can be configured from a plurality of nano-sized particles, dopants and an extruded plastic material, such as polystyrene. The nano-sized particles can be compounded into the extruded plastic material with at least one dopant that permits the plastic material to scintillate. One or more plastic light collectors can be associated with a neutron-sensitive scintillator, such that the plastic light collector includes a central hole thereof. A wavelength-shifting fiber can then be located within the hole. The wavelength shifting (WLS) fiber absorbs scintillation light having a wavelength thereof and re-emits the light at a longer wavelength.

  11. Electrophysiological methods in early glaucoma detection.

    PubMed

    Fernández-Tirado, F J; Uclés, P; Pablo, L; Honrubia, F M

    1994-04-01

    Electrophysiological methods like pattern electroretinogram and pattern visual evoked potentials may be the best approach for early glaucoma detection, as they have demonstrated to be sensitive to the ganglion cells functional changes. Reported values of both P50 and N95 pattern electroretinogram components differ widely, a fact perhaps related to a heterogeneous grouping of patients suffering from ocular hypertension and glaucoma, rather than to the type of technique utilized. This study is based on a total of 42 subjects: 14 normals, 16 subjects suffering from ocular hypertension, and 12 patients with glaucoma, with 79 eyes examined. Pattern electroretinogram and pattern visual evoked potentials were used as successive techniques. Setting condition for pattern electroretinogram, such as low temporal frequency (2 Hz), 30 min check size, high contrast (99%) and luminance (93 cd/m2), identified the N95 component as the best index for early glaucoma detection. In the control group N95 mean amplitude was 1.62 muV +/- 0.59 SD and showed almost significant difference with ocular hypertension (p = 0.07) and highly significant difference with the glaucoma group (p < 0.01), with decrement of 58.6% in the glaucoma group. P50 mean amplitude, on the contrary, did not show significant differences among the groups (Newman-Keul test), its reduction in glaucoma being 28%. The mean pattern visual evoked potentials latency was alos highly significant between glaucoma and control groups, but not between ocular hypertension and control groups; the mean amplitude did not show significant differences. A proportion of 26.6% abnormal pattern electroretinogram was found in the group suspected of having glaucoma where conventional methods had proved normal.(ABSTRACT TRUNCATED AT 250 WORDS) PMID:8079620

  12. Sensor And Method For Detecting A Superstrate

    NASA Technical Reports Server (NTRS)

    Arndt, G. Dickey (Inventor); Cari, James R. (Inventor); Ngo, Phong H. (Inventor); Fink, Patrick W. (Inventor); Siekierski, James D. (Inventor)

    2006-01-01

    Method and apparatus are provided for determining a superstrate on or near a sensor, e.g., for detecting the presence of an ice superstrate on an airplane wing or a road. In one preferred embodiment, multiple measurement cells are disposed along a transmission line. While the present invention is operable with different types of transmission lines, construction details for a presently preferred coplanar waveguide and a microstrip waveguide are disclosed. A computer simulation is provided as part of the invention for predicting results of a simulated superstrate detector system. The measurement cells may be physically partitioned, nonphysically partitioned with software or firmware, or include a combination of different types of partitions. In one embodiment, a plurality of transmission lines are utilized wherein each transmission line includes a plurality of measurement cells. The plurality of transmission lines may be multiplexed with the signal from each transmission line being applied to the same phase detector. In one embodiment, an inverse problem method is applied to determine the superstrate dielectric for a transmission line with multiple measurement cells.

  13. DOM Based XSS Detecting Method Based on Phantomjs

    NASA Astrophysics Data System (ADS)

    Dong, Ri-Zhan; Ling, Jie; Liu, Yi

    Because malicious code does not appear in html source code, DOM based XSS cannot be detected by traditional methods. By analyzing the causes of DOM based XSS, this paper proposes a detection method of DOM based XSS based on phantomjs. This paper uses function hijacking to detect dangerous operation and achieves a prototype system. Comparing with existing tools shows that the system improves the detection rate and the method is effective to detect DOM based XSS.

  14. Radio frequency detection assembly and method for detecting radio frequencies

    DOEpatents

    Cown, Steven H.; Derr, Kurt Warren

    2010-03-16

    A radio frequency detection assembly is described and which includes a radio frequency detector which detects a radio frequency emission produced by a radio frequency emitter from a given location which is remote relative to the radio frequency detector; a location assembly electrically coupled with the radio frequency detector and which is operable to estimate the location of the radio frequency emitter from the radio frequency emission which has been received; and a radio frequency transmitter electrically coupled with the radio frequency detector and the location assembly, and which transmits a radio frequency signal which reports the presence of the radio frequency emitter.

  15. System and method for detecting cells or components thereof

    DOEpatents

    Porter, Marc D.; Lipert, Robert J.; Doyle, Robert T.; Grubisha, Desiree S.; Rahman, Salma

    2009-01-06

    A system and method for detecting a detectably labeled cell or component thereof in a sample comprising one or more cells or components thereof, at least one cell or component thereof of which is detectably labeled with at least two detectable labels. In one embodiment, the method comprises: (i) introducing the sample into one or more flow cells of a flow cytometer, (ii) irradiating the sample with one or more light sources that are absorbed by the at least two detectable labels, the absorption of which is to be detected, and (iii) detecting simultaneously the absorption of light by the at least two detectable labels on the detectably labeled cell or component thereof with an array of photomultiplier tubes, which are operably linked to two or more filters that selectively transmit detectable emissions from the at least two detectable labels.

  16. A comparison of moving object detection methods for real-time moving object detection

    NASA Astrophysics Data System (ADS)

    Roshan, Aditya; Zhang, Yun

    2014-06-01

    Moving object detection has a wide variety of applications from traffic monitoring, site monitoring, automatic theft identification, face detection to military surveillance. Many methods have been developed across the globe for moving object detection, but it is very difficult to find one which can work globally in all situations and with different types of videos. The purpose of this paper is to evaluate existing moving object detection methods which can be implemented in software on a desktop or laptop, for real time object detection. There are several moving object detection methods noted in the literature, but few of them are suitable for real time moving object detection. Most of the methods which provide for real time movement are further limited by the number of objects and the scene complexity. This paper evaluates the four most commonly used moving object detection methods as background subtraction technique, Gaussian mixture model, wavelet based and optical flow based methods. The work is based on evaluation of these four moving object detection methods using two (2) different sets of cameras and two (2) different scenes. The moving object detection methods have been implemented using MatLab and results are compared based on completeness of detected objects, noise, light change sensitivity, processing time etc. After comparison, it is observed that optical flow based method took least processing time and successfully detected boundary of moving objects which also implies that it can be implemented for real-time moving object detection.

  17. Rapid Methods for the Detection of General Fecal Indicators

    EPA Science Inventory

    Specified that EPA should develop: appropriate and effective indicators for improving detection in a timely manner of pathogens in coastal waters appropriate, accurate, expeditious and cost-effective methods for the timely detection of pathogens in coastal waters

  18. [Bacteriocins: criteria, classification, characteristics, methods of detection].

    PubMed

    Blinkova, L P

    2003-01-01

    The review on bacteriocins of Gram negative and Gram positive bacteria. Criteria making it possible to regard antagonistic substances as bateriocins or bacteriocin-like substances and on their classification are presented. Examples of bacteriocins naming depending on the taxonomic position of the producer culture are given. Information on the physico-chemical and biological properties of bacteriocins and their purification is presented as well as on detection tools of bacteriocins in microorganisms and evaluation of the producer activity of the bacteriological culture.

  19. Method for detection of extremely low concentration

    DOEpatents

    Andresen, Brian D.; Miller, Fred S.

    2002-01-01

    An ultratrace detector system for hand-held gas chromatography having high sensitivity, for example, to emissions generated during production of weapons, biological compounds, drugs, etc. The detector system is insensitive to water, air, helium, argon, oxygen, and CO.sub.2. The detector system is basically composed of a hand-held capillary gas chromatography (GC), an insulated heated redox-chamber, a detection chamber, and a vapor trap. For example, the detector system may use gas phase redox reactions and spectral absorption of mercury vapor. The gas chromatograph initially separates compounds that percolate through a bed of heated mercuric oxide (HgO) in a silica--or other metal--aerogel material which acts as an insulator. Compounds easily oxidized by HgO liberate atomic mercury that subsequently pass through a detection chamber which includes a detector cell, such as quartz, that is illuminated with a 254 nm ultra-violet (UV) mercury discharge lamp which generates the exact mercury absorption bands that are used to detect the liberated mercury atoms. Atomic mercury strongly absorbs 254 nm energy is therefore a specific signal for reducing compounds eluting from the capillary GC, whereafter the atomic mercury is trapped for example, in a silicon-aerogel trap.

  20. Method of detecting and counting bacteria

    NASA Technical Reports Server (NTRS)

    Picciolo, G. L.; Chappelle, E. W. (Inventor)

    1976-01-01

    An improved method is provided for determining bacterial levels, especially in samples of aqueous physiological fluids. The method depends on the quantitative determination of bacterial adenosine triphosphate (ATP) in the presence of nonbacterial ATP. The bacterial ATP is released by cell rupture and is measured by an enzymatic bioluminescent assay. A concentration technique is included to make the method more sensitive. It is particularly useful where the fluid to be measured contains an unknown or low bacteria count.

  1. A new method of pulse edge detection in low SNR

    NASA Astrophysics Data System (ADS)

    Fan, Xiaolei; Li, Tao; Su, Shaoying; Chen, Zengping

    2015-12-01

    In this paper, we propose a new pulse edge detection method based on short time Fourier transform (STFT) and difference of boxes (DOB) filter. Firstly, detect the coarse starting and ending positions in frequency domain after STFT. Then obtain the precise pulse edge through DOB filter. It achieves a better performance than the classical energy detection (ED) method, especially when signal to noise ratio (SNR) is low. Simulation results and real data application validate the effectiveness of the proposed method.

  2. Method for early detection of infectious mononucleosis

    DOEpatents

    Willard, K.E.

    1982-08-10

    Early detection of infectious mononucleosis is carried out using a sample of human blood by isolating and identifying the presence of Inmono proteins in the sample from a two-dimensional protein map with the proteins being characterized by having isoelectric banding as measured in urea of about -16 to -17 with respect to certain isoelectric point standards and molecular mass of about 70 to 75 K daltons as measured in the presence of sodium dodecylsulfate containing polyacrylamide gels, the presence of the Inmono proteins being correlated with the existence of infectious mononucleosis.

  3. Correlation studies on surface particle detection methods

    NASA Technical Reports Server (NTRS)

    Peterson, Ronald V.; White, James C.

    1988-01-01

    The accurate determination of dust levels on optical surfaces is necessary to assess sensor system performance. A comparison study was made on several particle measurement methods including those based on direct imaging and light scattering. The effectiveness of removing the particles from the surface prior to determining particle size distributions was also assessed. These studies revealed that some methods, especially those requiring particle removal before analysis, are subject to large systematic errors affecting particle size distributions. Thus, an understanding of the particle measurement methods employed is necessary before any surface cleanliness or obstruction value assignments are accepted as true representations of an optical surface contamination condition.

  4. Endotoxemia: methods of detection and clinical correlates.

    PubMed Central

    Hurley, J C

    1995-01-01

    As an assay for endotoxin, the Limulus amebocyte lysate assay has several desirable properties: sensitivity, specificity, and potential for adaptation to a quantitative format. Several modifications have been developed to enhance its potential for clinical application. The modifications that allow quantitative measurement of endotoxin and also improve its application to blood samples are described in this review. In fluids other than blood, the detection of endotoxin with the Limulus amebocyte lysate assay can be used as an aid to identify the presence of gram-negative bacteria, and the assay has established utility. With blood, however, there are a range of factors that interfere with the detection of endotoxemia and there are disparate views with respect to the diagnostic and prognostic significance of the test results. In general, the clinical significance of the finding of endotoxemia broadly parallels the frequency and importance of gram-negative sepsis in the patient groups studied and a decline in endotoxin levels accompanies clinical improvement. However, with therapies designed to reduce levels of endotoxin, or to antagonize its effects, it is unclear whether clinical improvement occurs as a consequence of changes in the levels of endotoxemia. PMID:7621402

  5. Polarization sensitive optical coherence tomography detection method

    SciTech Connect

    Everett, M J; Sathyam, U S; Colston, B W; DaSilva, L B; Fried, D; Ragadio, J N; Featherstone, J D B

    1999-05-12

    This study demonstrates the potential of polarization sensitive optical coherence tomography (PS-OCT) for non-invasive in vivo detection and characterization of early, incipient caries lesions. PS-OCT generates cross-sectional images of biological tissue while measuring the effect of the tissue on the polarization state of incident light. Clear discrimination between regions of normal and demineralized enamel is first shown in PS-OCT images of bovine enamel blocks containing well-characterized artificial lesions. High-resolution, cross-sectional images of extracted human teeth are then generated that clearly discriminate between the normal and carious regions on both the smooth and occlusal surfaces. Regions of the teeth that appeared to be demineralized in the PS-OCT images were verified using histological thin sections examined under polarized light microscopy. The PS-OCT system discriminates between normal and carious regions by measuring the polarization state of the back-scattered 1310 nm light, which is affected by the state of demineralization of the enamel. Demineralization of enamel increases the scattereing coefficient, thus depolarizing the incident light. This study shows that PS-OCT has great potential for the detection, characterization, and monitoring of incipient caries lesions.

  6. Abnormality degree detection method using negative potential field group detectors

    NASA Astrophysics Data System (ADS)

    Zhang, Hongli; Liu, Shulin; Li, Dong; Shi, Kunju; Wang, Bo; Cui, Jiqiang

    2015-09-01

    Online monitoring methods have been widely used in many major devices, however the normal and abnormal states of equipment are estimated mainly based on the monitoring results whether monitored parameters exceed the setting thresholds. Using these monitoring methods may cause serious false positive or false negative results. In order to precisely monitor the state of equipment, the problem of abnormality degree detection without fault sample is studied with a new detection method called negative potential field group detectors(NPFG-detectors). This method achieves the quantitative expression of abnormality degree and provides the better detection results compared with other methods. In the process of Iris data set simulation, the new algorithm obtains the successful results in abnormal detection. The detection rates for 3 types of Iris data set respectively reach 100%, 91.6%, and 95.24% with 50% training samples. The problem of Bearing abnormality degree detection via an abnormality degree curve is successfully solved.

  7. Detection methods and performance criteria for genetically modified organisms.

    PubMed

    Bertheau, Yves; Diolez, Annick; Kobilinsky, André; Magin, Kimberly

    2002-01-01

    Detection methods for genetically modified organisms (GMOs) are necessary for many applications, from seed purity assessment to compliance of food labeling in several countries. Numerous analytical methods are currently used or under development to support these needs. The currently used methods are bioassays and protein- and DNA-based detection protocols. To avoid discrepancy of results between such largely different methods and, for instance, the potential resulting legal actions, compatibility of the methods is urgently needed. Performance criteria of methods allow evaluation against a common standard. The more-common performance criteria for detection methods are precision, accuracy, sensitivity, and specificity, which together specifically address other terms used to describe the performance of a method, such as applicability, selectivity, calibration, trueness, precision, recovery, operating range, limit of quantitation, limit of detection, and ruggedness. Performance criteria should provide objective tools to accept or reject specific methods, to validate them, to ensure compatibility between validated methods, and be used on a routine basis to reject data outside an acceptable range of variability. When selecting a method of detection, it is also important to consider its applicability, its field of applications, and its limitations, by including factors such as its ability to detect the target analyte in a given matrix, the duration of the analyses, its cost effectiveness, and the necessary sample sizes for testing. Thus, the current GMO detection methods should be evaluated against a common set of performance criteria.

  8. Method and apparatus for detecting halogenated hydrocarbons

    DOEpatents

    Monagle, Matthew; Coogan, John J.

    1997-01-01

    A halogenated hydrocarbon (HHC) detector is formed from a silent discharge (also called a dielectric barrier discharge) plasma generator. A silent discharge plasma device receives a gas sample that may contain one or more HHCs and produces free radicals and excited electrons for oxidizing the HHCs in the gas sample to produce water, carbon dioxide, and an acid including halogens in the HHCs. A detector is used to sensitively detect the presence of the acid. A conductivity cell detector combines the oxidation products with a solvent where dissociation of the acid increases the conductivity of the solvent. The conductivity cell output signal is then functionally related to the presence of HHCs in the gas sample. Other detectors include electrochemical cells, infrared spectrometers, and negative ion mobility spectrometers.

  9. Sciatica: Detection and Confirmation by New Method

    PubMed Central

    Nadkarni, Sunil

    2014-01-01

    We need to overcome limitations of present assessment and also integrate newer research in our work about sciatica. Inflammation induces changes in the DRG and nerve root. It sensitizes the axons. Nociceptor is a unique axon. It is pseudo unipolar: both its ends, central and peripheral, behave in similar fashion. The nerve in periphery which carries these axons may selectively become sensitive to mechanical pressure--“mechanosensitized,” as we coin the phrase. Many pain questionnaires are used and are effective in identifying neuropathic pain solely on basis of descriptors but they do not directly physically correlate nerve root and pain. A thorough neurological evaluation is always needed. Physical examination is not direct pain assessment but testing mobility of nerve root and its effect on pain generation. There is a dogmatic dominance of dermatomes in assessment of leg pain. They are unreliable. Images may not correlate with symptoms and pathology in about 28% of cases. Electrophysiology may be normal in purely inflamed nerve root. Palpation may help in such inflammatory setting to refine our assessment further. Confirmation of sciatica is done by selective nerve root block (SNRB) today but it is fraught with several complications and needs elaborate inpatient and operating room set up. We have used the unique property of the pseudo unipolar axon that both its ends have similar functional properties and so inject along its peripheral end sodium channel blockers to block the basic cause of the mechanosensitization namely upregulated sodium channels in the root or DRG. Thus using palpation we may be able to detect symptomatic nerve in stage of inflammation and with distal end injection, along same inflamed nerve we may be able to abolish and so confirm sciatica. Discussions of sciatica pain diagnosis tend to immediately shift and centre on the affected disc rather than the nerve. Theoretically it may be possible to detect the affected nerve by palpating the

  10. Methods for detection of ataxia telangiectasia mutations

    DOEpatents

    Gatti, Richard A.

    2005-10-04

    The present invention is directed to a method of screening large, complex, polyexonic eukaryotic genes such as the ATM gene for mutations and polymorphisms by an improved version of single strand conformation polymorphism (SSCP) electrophoresis that allows electrophoresis of two or three amplified segments in a single lane. The present invention also is directed to new mutations and polymorphisms in the ATM gene that are useful in performing more accurate screening of human DNA samples for mutations and in distinguishing mutations from polymorphisms, thereby improving the efficiency of automated screening methods.

  11. Multimode nondestructive detecting method for high-speed rail defects

    NASA Astrophysics Data System (ADS)

    Sun, Mingjian; Cheng, Xingzhen; Wan, Guangnan; Liu, Ting; Fu, Ying; Wang, Yan

    2015-11-01

    It is very important to detect the surface defects of the high-speed rail for security concerns. A multimode detecting method, which integrates high resolution of optical image, high precision of photoacoustic detection and strong penetration of ultrasound detecting, is proposed for the rail defect detection. Utilizing the surface defect characteristics obtained from optical signal, the photoacoustic and ultrasound scanning region could be determined, and rail shallow and internal defect characteristics can be acquired subsequently. Eventually, fusing three modal signals mentioned above, the information of the entire rail defect, including type, extension trend and depth can be detected. It has been proved that the multimode method can improve the detecting efficiency, and enlarge the detection range in the meantime.

  12. A numerical method of detecting singularity

    NASA Technical Reports Server (NTRS)

    Laporte, M.; Vignes, J.

    1978-01-01

    A numerical method is reported which determines a value C for the degree of conditioning of a matrix. This value is C = 0 for a singular matrix and has progressively larger values for matrices which are increasingly well-conditioned. This value is C sub = C max sub max (C defined by the precision of the computer) when the matrix is perfectly well conditioned.

  13. Method of Detecting Coliform Bacteria from Reflected Light

    NASA Technical Reports Server (NTRS)

    Vincent, Robert K. (Inventor)

    2014-01-01

    The present invention relates to a method of detecting coliform bacteria in water from reflected light, and also includes devices for the measurement, calculation and transmission of data relating to that method.

  14. Method for detection of antibodies for metallic elements

    DOEpatents

    Barrick, C.W.; Clarke, S.M.; Nordin, C.W.

    1993-11-30

    An apparatus and method for detecting antibodies specific to non-protein antigens. The apparatus is an immunological plate containing a plurality of plastic projections coated with a non-protein material. Assays utilizing the plate are capable of stabilizing the non-protein antigens with detection levels for antibodies specific to the antigens on a nanogram level. A screening assay with the apparatus allows for early detection of exposure to non-protein materials. Specifically metallic elements are detected. 10 figures.

  15. Method for detection of antibodies for metallic elements

    DOEpatents

    Barrick, Charles W.; Clarke, Sara M.; Nordin, Carl W.

    1993-11-30

    An apparatus and method for detecting antibodies specific to non-protein antigens. The apparatus is an immunological plate containing a plurality of plastic projections coated with a non-protein material. Assays utilizing the plate are capable of stabilizing the non-protein antigens with detection levels for antibodies specific to the antigens on a nanogram level. A screening assay with the apparatus allows for early detection of exposure to non-protein materials. Specifically metallic elements are detected.

  16. Heterodyne method for high specificity gas detection.

    NASA Technical Reports Server (NTRS)

    Dimeff, J.; Donaldson, R. W.; Gunter, W. D., Jr.; Jaynes, D. N.; Margozzi, A. P.; Deboo, G. J.; Mcclatchie, E. A.; Williams, K. G.

    1971-01-01

    This paper describes a new technique for measuring trace quantities of gases. The technique involves the use of a reference cell (containing a known amount of the gas being sought) and a sample cell (containing an unknown amount of the same gas) wherein the gas densities are modulated. Light passing through the two cells in sequence is modulated in intensity at the vibrational-rotational lines characteristic of the absorption spectrum for the gas of interest. Since the absorption process is nonlinear, modulating the two absorption cells at two different frequencies gives rise to a heterodyning effect, which in turn introduces sum and difference frequencies in the detected signal. Measuring the ratio of the difference frequency signal for example, to the signal introduced by the reference cell provides a normalized measure of the amount of the gas in the sample cell. The readings produced are thereby independent of source intensity, window transparency, and detector sensitivity. Experimental evaluation of the technique suggests that it should be applicable to a wide range of gases, that it should be able to reject spurious signals due to unwanted gases, and that it should be sensitive to concentrations of the order of 10 to the minus 8th power when used with a sample cell of only 20 cm length.

  17. Laser pulse detection method and apparatus

    NASA Astrophysics Data System (ADS)

    Goss, W.; Janesick, J. R.

    1984-02-01

    A sensor is described for detecting the difference in phase of a pair of returned light pulse components, such as two components of a light pulse of an optical gyro. In an optic gyro, the two light components have passed in opposite directions through a coil of optical fiber, with the difference in phase of the returned light components determining the intensity of light shining on the sensor. The sensor includes a CCD (charge coupled device) that receives the pair of returned light components to generate a charge proportional to the number of photons in the received light. The amount of the charge represents the phase difference between the two light components. At a time after the transmission of the light pulse and before the expected time of arrival of the interfering light components, charge accumulating in the CCD as a result of reflections from components in the system, are repeatedly removed from the CCD, by transferring out charges in the CCD and dumping these charges.

  18. Laser pulse detection method and apparatus

    NASA Technical Reports Server (NTRS)

    Goss, W.; Janesick, J. R. (Inventor)

    1984-01-01

    A sensor is described for detecting the difference in phase of a pair of returned light pulse components, such as two components of a light pulse of an optical gyro. In an optic gyro, the two light components have passed in opposite directions through a coil of optical fiber, with the difference in phase of the returned light components determining the intensity of light shining on the sensor. The sensor includes a CCD (charge coupled device) that receives the pair of returned light components to generate a charge proportional to the number of photons in the received light. The amount of the charge represents the phase difference between the two light components. At a time after the transmission of the light pulse and before the expected time of arrival of the interfering light components, charge accumulating in the CCD as a result of reflections from components in the system, are repeatedly removed from the CCD, by transferring out charges in the CCD and dumping these charges.

  19. Laser pulse detection method and apparatus

    NASA Technical Reports Server (NTRS)

    Goss, Willis C. (Inventor); Janesick, James R. (Inventor)

    1987-01-01

    A sensor is described for detecting the difference in phase of a pair of returned light pulse components, such as the two components of a light pulse of an optical gyro. In an optic gyro, the two light components have passed in opposite directions through a coil of optical fiber, with the difference in phase of the returned light components determining the intensity of light shining on the sensor. The sensor includes a CCD (charge coupled device) that receives the pair of returned light components to generate a charge proportional to the number of photons in the received light. The amount of the charge represents the phase difference between the two light components. At a time after the transmission of the light pulse and before the expected time of arrival of the interfering light components, charge accumulating in the CCD as a result of reflections from optical components in the system, are repeatedly removed from the CCD, by transferring out charges in the CCD and dumping these charges.

  20. Localized surface plasmon resonance mercury detection system and methods

    DOEpatents

    James, Jay; Lucas, Donald; Crosby, Jeffrey Scott; Koshland, Catherine P.

    2016-03-22

    A mercury detection system that includes a flow cell having a mercury sensor, a light source and a light detector is provided. The mercury sensor includes a transparent substrate and a submonolayer of mercury absorbing nanoparticles, e.g., gold nanoparticles, on a surface of the substrate. Methods of determining whether mercury is present in a sample using the mercury sensors are also provided. The subject mercury detection systems and methods find use in a variety of different applications, including mercury detecting applications.

  1. Criteria For Evaluation of Proposed Protozoan Detection Methods

    EPA Science Inventory

    Currently, the only EPA approved method for detection and quantitation of protozoan cysts and oöcysts in source and drinking water, is the “ICR Protozoan Method for Detecting Giardia Cysts and Cryptosporidium Oöcysts in Water by a Fluorescent Antibody Procedure (ICR Microbial La...

  2. Ultra-high sensitivity radiation detection apparatus and method

    DOEpatents

    Gross, Kenneth C.; Valentine, John D.; Markum, Francis; Zawadzki, Mary; Dickerman, Charles

    1999-01-01

    A method and apparatus are provided to concentrate and detect very low levels of radioactive noble gases from the atmosphere. More specifically the invention provides a method and apparatus to concentrate xenon, krypton and radon in an organic fluid and to detect these gases by the radioactive emissions.

  3. Method for detecting trace impurities in gases

    DOEpatents

    Freund, Samuel M.; Maier, II, William B.; Holland, Redus F.; Beattie, Willard H.

    1981-01-01

    A technique for considerably improving the sensitivity and specificity of infrared spectrometry as applied to quantitative determination of trace impurities in various carrier or solvent gases is presented. A gas to be examined for impurities is liquefied and infrared absorption spectra of the liquid are obtained. Spectral simplification and number densities of impurities in the optical path are substantially higher than are obtainable in similar gas-phase analyses. Carbon dioxide impurity (.about.2 ppm) present in commercial Xe and ppm levels of Freon 12 and vinyl chloride added to liquefied air are used to illustrate the method.

  4. Method for detecting trace impurities in gases

    DOEpatents

    Freund, S.M.; Maier, W.B. II; Holland, R.F.; Beattie, W.H.

    A technique for considerably improving the sensitivity and specificity of infrared spectrometry as applied to quantitative determination of trace impurities in various carrier or solvent gases is presented. A gas to be examined for impurities is liquefied and infrared absorption spectra of the liquid are obtained. Spectral simplification and number densities of impurities in the optical path are substantially higher than are obtainable in similar gas-phase analyses. Carbon dioxide impurity (approx. 2 ppM) present in commercial Xe and ppM levels of Freon 12 and vinyl chloride added to liquefied air are used to illustrate the method.

  5. Analytical Methods for Secondary Metabolite Detection.

    PubMed

    Taibon, Judith; Strasser, Hermann

    2016-01-01

    The entomopathogenic fungi Metarhizium brunneum, Beauveria bassiana, and B. brongniartii are widely applied as biological pest control agent in OECD countries. Consequently, their use has to be flanked by a risk management approach, which includes the need to monitor the fate of their relevant toxic metabolites. There are still data gaps claimed by regulatory authorities pending on their identification and quantification of relevant toxins or secondary metabolites. In this chapter, analytical methods are presented allowing the qualitative and quantitative analysis of the relevant toxic B. brongniartii metabolite oosporein and the three M. brunneum relevant destruxin (dtx) derivatives dtx A, dtx B, and dtx E. PMID:27565501

  6. Analytical Methods for Secondary Metabolite Detection.

    PubMed

    Taibon, Judith; Strasser, Hermann

    2016-01-01

    The entomopathogenic fungi Metarhizium brunneum, Beauveria bassiana, and B. brongniartii are widely applied as biological pest control agent in OECD countries. Consequently, their use has to be flanked by a risk management approach, which includes the need to monitor the fate of their relevant toxic metabolites. There are still data gaps claimed by regulatory authorities pending on their identification and quantification of relevant toxins or secondary metabolites. In this chapter, analytical methods are presented allowing the qualitative and quantitative analysis of the relevant toxic B. brongniartii metabolite oosporein and the three M. brunneum relevant destruxin (dtx) derivatives dtx A, dtx B, and dtx E.

  7. Delamination detection using methods of computational intelligence

    NASA Astrophysics Data System (ADS)

    Ihesiulor, Obinna K.; Shankar, Krishna; Zhang, Zhifang; Ray, Tapabrata

    2012-11-01

    Abstract Reliable delamination prediction scheme is indispensable in order to prevent potential risks of catastrophic failures in composite structures. The existence of delaminations changes the vibration characteristics of composite laminates and hence such indicators can be used to quantify the health characteristics of laminates. An approach for online health monitoring of in-service composite laminates is presented in this paper that relies on methods based on computational intelligence. Typical changes in the observed vibration characteristics (i.e. change in natural frequencies) are considered as inputs to identify the existence, location and magnitude of delaminations. The performance of the proposed approach is demonstrated using numerical models of composite laminates. Since this identification problem essentially involves the solution of an optimization problem, the use of finite element (FE) methods as the underlying tool for analysis turns out to be computationally expensive. A surrogate assisted optimization approach is hence introduced to contain the computational time within affordable limits. An artificial neural network (ANN) model with Bayesian regularization is used as the underlying approximation scheme while an improved rate of convergence is achieved using a memetic algorithm. However, building of ANN surrogate models usually requires large training datasets. K-means clustering is effectively employed to reduce the size of datasets. ANN is also used via inverse modeling to determine the position, size and location of delaminations using changes in measured natural frequencies. The results clearly highlight the efficiency and the robustness of the approach.

  8. Vapor generation methods for explosives detection research

    SciTech Connect

    Grate, Jay W.; Ewing, Robert G.; Atkinson, David A.

    2012-12-01

    The generation of calibrated vapor samples of explosives compounds remains a challenge due to the low vapor pressures of the explosives, adsorption of explosives on container and tubing walls, and the requirement to manage (typically) multiple temperature zones as the vapor is generated, diluted, and delivered. Methods that have been described to generate vapors can be classified as continuous or pulsed flow vapor generators. Vapor sources for continuous flow generators are typically explosives compounds supported on a solid support, or compounds contained in a permeation or diffusion device. Sources are held at elevated isothermal temperatures. Similar sources can be used for pulsed vapor generators; however, pulsed systems may also use injection of solutions onto heated surfaces with generation of both solvent and explosives vapors, transient peaks from a gas chromatograph, or vapors generated by s programmed thermal desorption. This article reviews vapor generator approaches with emphasis on the method of generating the vapors and on practical aspects of vapor dilution and handling. In addition, a gas chromatographic system with two ovens that is configurable with up to four heating ropes is proposed that could serve as a single integrated platform for explosives vapor generation and device testing. Issues related to standards, calibration, and safety are also discussed.

  9. Method and apparatus for detecting chemical binding

    DOEpatents

    Warner, Benjamin P.; Havrilla, George J.; Miller, Thomasin C.; Wells, Cyndi A.

    2007-07-10

    The method for screening binding between a target binder and potential pharmaceutical chemicals involves sending a solution (preferably an aqueous solution) of the target binder through a conduit to a size exclusion filter, the target binder being too large to pass through the size exclusion filter, and then sending a solution of one or more potential pharmaceutical chemicals (preferably an aqueous solution) through the same conduit to the size exclusion filter after target binder has collected on the filter. The potential pharmaceutical chemicals are small enough to pass through the filter. Afterwards, x-rays are sent from an x-ray source to the size exclusion filter, and if the potential pharmaceutical chemicals form a complex with the target binder, the complex produces an x-ray fluorescence signal having an intensity that indicates that a complex has formed.

  10. Method And Apparatus For Detecting Chemical Binding

    DOEpatents

    Warner, Benjamin P.; Havrilla, George J.; Miller, Thomasin C.; Wells, Cyndi A.

    2005-02-22

    The method for screening binding between a target binder and potential pharmaceutical chemicals involves sending a solution (preferably an aqueous solution) of the target binder through a conduit to a size exclusion filter, the target binder being too large to pass through the size exclusion filter, and then sending a solution of one or more potential pharmaceutical chemicals (preferably an aqueous solution) through the same conduit to the size exclusion filter after target binder has collected on the filter. The potential pharmaceutical chemicals are small enough to pass through the filter. Afterwards, x-rays are sent from an x-ray source to the size exclusion filter, and if the potential pharmaceutical chemicals form a complex with the target binder, the complex produces an x-ray fluorescence signal having an intensity that indicates that a complex has formed.

  11. Effects of Linking Methods on Detection of DIF.

    ERIC Educational Resources Information Center

    Kim, Seock-Ho; Cohen, Allan S.

    1992-01-01

    Effects of the following methods for linking metrics on detection of differential item functioning (DIF) were compared: (1) test characteristic curve method (TCC); (2) weighted mean and sigma method; and (3) minimum chi-square method. With large samples, results were essentially the same. With small samples, TCC was most accurate. (SLD)

  12. Using statistical methods and genotyping to detect tuberculosis outbreaks

    PubMed Central

    2013-01-01

    Background Early identification of outbreaks remains a key component in continuing to reduce the burden of infectious disease in the United States. Previous studies have applied statistical methods to detect unexpected cases of disease in space or time. The objectives of our study were to assess the ability and timeliness of three spatio-temporal methods to detect known outbreaks of tuberculosis. Methods We used routinely available molecular and surveillance data to retrospectively assess the effectiveness of three statistical methods in detecting tuberculosis outbreaks: county-based log-likelihood ratio, cumulative sums, and a spatial scan statistic. Results Our methods identified 8 of the 9 outbreaks, and 6 outbreaks would have been identified 1–52 months (median = 10 months) before local public health authorities identified them. Assuming no delays in data availability, 46 (59.7%) of the 77 patients in the 9 outbreaks were identified after our statistical methods would have detected the outbreak but before local public health authorities became aware of the problem. Conclusions Statistical methods, when applied retrospectively to routinely collected tuberculosis data, can successfully detect known outbreaks, potentially months before local public health authorities become aware of the problem. The three methods showed similar results; no single method was clearly superior to the other two. Further study to elucidate the performance of these methods in detecting tuberculosis outbreaks will be done in a prospective analysis. PMID:23497235

  13. Systems and Methods for Automated Water Detection Using Visible Sensors

    NASA Technical Reports Server (NTRS)

    Rankin, Arturo L. (Inventor); Matthies, Larry H. (Inventor); Bellutta, Paolo (Inventor)

    2016-01-01

    Systems and methods are disclosed that include automated machine vision that can utilize images of scenes captured by a 3D imaging system configured to image light within the visible light spectrum to detect water. One embodiment includes autonomously detecting water bodies within a scene including capturing at least one 3D image of a scene using a sensor system configured to detect visible light and to measure distance from points within the scene to the sensor system, and detecting water within the scene using a processor configured to detect regions within each of the at least one 3D images that possess at least one characteristic indicative of the presence of water.

  14. Food allergen detection methods: a coordinated approach.

    PubMed

    Goodwin, Philip R

    2004-01-01

    The levels (1-2%) and increasing severity of allergic responses to food in the adult population are well documented, as is the phenomenon of even higher (3-8%) and apparently increasing incidence in children, albeit that susceptibility decreases with age. Problematic foods include peanut, milk, eggs, tree nuts, and sesame, but the list is growing as awareness continues to rise. The amounts of such foods that can cause allergic reactions is difficult to gauge; however, the general consensus is that ingestion of low parts per million is sufficient to cause severe reactions in badly affected individuals. Symptoms can rapidly-within minutes-progress from minor discomfort to severe, even life-threatening anaphylactic shock in those worst affected. Given the combination of high incidence of atopy, potential severity of response, and apparently widespread instances of "hidden" allergens in the food supply, it is not surprising that this issue is increasingly subject to legislative and regulatory scrutiny. In order to assist in the control of allergen levels in foods to acceptable levels, analysts require a combination of test methods, each designed to produce accurate, timely, and cost-effective analytical information. Such information contributes significantly to Hazard Analysis Critical Control Point programs to determine food manufacturers' risk and improves the accuracy of monitoring and surveillance by food industry, commercial, and enforcement laboratories. Analysis thereby facilitates improvements in compliance with labeling laws with concomitant reductions in risks to atopic consumers. This article describes a combination of analytical approaches to fulfill the various needs of these 3 analytical communities.

  15. Harmonic Motion Microwave Doppler Imaging method for breast tumor detection.

    PubMed

    Top, Can Barıs; Tafreshi, Azadeh Kamali; Gençer, Nevzat G

    2014-01-01

    Harmonic Motion Microwave Doppler Imaging (HMMDI) method is recently proposed as a non-invasive hybrid breast imaging technique for tumor detection. The acquired data depend on acoustic, elastic and electromagnetic properties of the tissue. The potential of the method is analyzed with simulation studies and phantom experiments. In this paper, the results of these studies are summarized. It is shown that HMMDI method has a potential to detect malignancies inside fibro-glandular tissue.

  16. Harmonic Motion Microwave Doppler Imaging method for breast tumor detection.

    PubMed

    Top, Can Barıs; Tafreshi, Azadeh Kamali; Gençer, Nevzat G

    2014-01-01

    Harmonic Motion Microwave Doppler Imaging (HMMDI) method is recently proposed as a non-invasive hybrid breast imaging technique for tumor detection. The acquired data depend on acoustic, elastic and electromagnetic properties of the tissue. The potential of the method is analyzed with simulation studies and phantom experiments. In this paper, the results of these studies are summarized. It is shown that HMMDI method has a potential to detect malignancies inside fibro-glandular tissue. PMID:25571382

  17. 25 Years of Self-organized Criticality: Numerical Detection Methods

    NASA Astrophysics Data System (ADS)

    McAteer, R. T. James; Aschwanden, Markus J.; Dimitropoulou, Michaila; Georgoulis, Manolis K.; Pruessner, Gunnar; Morales, Laura; Ireland, Jack; Abramenko, Valentyna

    2016-01-01

    The detection and characterization of self-organized criticality (SOC), in both real and simulated data, has undergone many significant revisions over the past 25 years. The explosive advances in the many numerical methods available for detecting, discriminating, and ultimately testing, SOC have played a critical role in developing our understanding of how systems experience and exhibit SOC. In this article, methods of detecting SOC are reviewed; from correlations to complexity to critical quantities. A description of the basic autocorrelation method leads into a detailed analysis of application-oriented methods developed in the last 25 years. In the second half of this manuscript space-based, time-based and spatial-temporal methods are reviewed and the prevalence of power laws in nature is described, with an emphasis on event detection and characterization. The search for numerical methods to clearly and unambiguously detect SOC in data often leads us outside the comfort zone of our own disciplines—the answers to these questions are often obtained by studying the advances made in other fields of study. In addition, numerical detection methods often provide the optimum link between simulations and experiments in scientific research. We seek to explore this boundary where the rubber meets the road, to review this expanding field of research of numerical detection of SOC systems over the past 25 years, and to iterate forwards so as to provide some foresight and guidance into developing breakthroughs in this subject over the next quarter of a century.

  18. A novel method for determining target detection thresholds

    NASA Astrophysics Data System (ADS)

    Grossman, S.

    2015-05-01

    Target detection is the act of isolating objects of interest from the surrounding clutter, generally using some form of test to include objects in the found class. However, the method of determining the threshold is overlooked relying on manual determination either through empirical observation or guesswork. The question remains: how does an analyst identify the detection threshold that will produce the optimum results? This work proposes the concept of a target detection sweet spot where the missed detection probability curve crosses the false detection curve; this represents the point at which missed detects are traded for false detects in order to effect positive or negative changes in the detection probability. ROC curves are used to characterize detection probabilities and false alarm rates based on empirically derived data. It identifies the relationship between the empirically derived results and the first moment statistic of the histogram of the pixel target value data and then proposes a new method of applying the histogram results in an automated fashion to predict the target detection sweet spot at which to begin automated target detection.

  19. Systems and methods for detection of blowout precursors in combustors

    DOEpatents

    Lieuwen, Tim C.; Nair, Suraj

    2006-08-15

    The present invention comprises systems and methods for detecting flame blowout precursors in combustors. The blowout precursor detection system comprises a combustor, a pressure measuring device, and blowout precursor detection unit. A combustion controller may also be used to control combustor parameters. The methods of the present invention comprise receiving pressure data measured by an acoustic pressure measuring device, performing one or a combination of spectral analysis, statistical analysis, and wavelet analysis on received pressure data, and determining the existence of a blowout precursor based on such analyses. The spectral analysis, statistical analysis, and wavelet analysis further comprise their respective sub-methods to determine the existence of blowout precursors.

  20. Performance evaluation of fault detection methods for wastewater treatment processes.

    PubMed

    Corominas, Lluís; Villez, Kris; Aguado, Daniel; Rieger, Leiv; Rosén, Christian; Vanrolleghem, Peter A

    2011-02-01

    Several methods to detect faults have been developed in various fields, mainly in chemical and process engineering. However, minimal practical guidelines exist for their selection and application. This work presents an index that allows for evaluating monitoring and diagnosis performance of fault detection methods, which takes into account several characteristics, such as false alarms, false acceptance, and undesirable switching from correct detection to non-detection during a fault event. The usefulness of the index to process engineering is demonstrated first by application to a simple example. Then, it is used to compare five univariate fault detection methods (Shewhart, EWMA, and residuals of EWMA) applied to the simulated results of the Benchmark Simulation Model No. 1 long-term (BSM1_LT). The BSM1_LT, provided by the IWA Task Group on Benchmarking of Control Strategies, is a simulation platform that allows for creating sensor and actuator faults and process disturbances in a wastewater treatment plant. The results from the method comparison using BSM1_LT show better performance to detect a sensor measurement shift for adaptive methods (residuals of EWMA) and when monitoring the actuator signals in a control loop (e.g., airflow). Overall, the proposed index is able to screen fault detection methods.

  1. Optical methods for the detection of heavy metal ions

    NASA Astrophysics Data System (ADS)

    Uglov, A. N.; Bessmertnykh-Lemeune, A.; Guilard, R.; Averin, A. D.; Beletskaya, I. P.

    2014-03-01

    The review covers an important area of the modern chemistry, namely, the detection of heavy metal ions using optical molecular detectors. The role of this method in metal ion detection and the physicochemical grounds of operation of chemosensors are discussed, and examples of detection of most abundant heavy metal ions and synthetic approaches to molecular detectors are presented. The immobilization of molecular detectors on solid substrates for the design of analytical sensor devices is described. The bibliography includes 178 references.

  2. Feature matching method in shaped light mode VFD defect detection

    NASA Astrophysics Data System (ADS)

    Jin, Xuanhong; Dai, Shuguang; Mu, Pingan

    2010-08-01

    In recent years, Vacuum Fluorescent Display (VFD) module in the car audio panel has been widely used. However, due to process reasons, VFD display production process will produce defects, not only affect the appearance, but also affect the display correctly. So building a car VFD display panel defect detection system is of great significance. Machine vision technology is introduced into the automotive VFD display defect detection in order to achieve fast and accurate detection of defects. Shaped light mode is a typical flaw detection mode which is based on characteristics of vehicle VFD panel. According to the image features, learning of the gray matching and feature matching method, we integrated use of feature matching method and the gray level matching method to achieve defect detection.

  3. Comparison study of seizure detection using stationary and nonstationary methods.

    PubMed

    Li, Ying; Hsin, Yue-Loong; Liu, Wentai

    2014-01-01

    We present an accurate seizure detection algorithm, and make a detailed comparison of two frequency analysis methods: a widely used stationary method - Fast Fourier Transform (FFT) and a relatively new nonstationary method - Hilbert-Huang Transform (HHT). Two public databases and one our own database were tested. The results show that our algorithm has very high accuracy compared with the state-of-the-art. More interestingly, it shows that the nonstationary method HHT offers better performance than the stationary method FFT in seizure detection. Therefore we propose that we should pay attention to the nonstationarity of EEG signal, since the "stationary assumption" may introduce some inaccuracy.

  4. Bayesian methods for outliers detection in GNSS time series

    NASA Astrophysics Data System (ADS)

    Qianqian, Zhang; Qingming, Gui

    2013-07-01

    This article is concerned with the problem of detecting outliers in GNSS time series based on Bayesian statistical theory. Firstly, a new model is proposed to simultaneously detect different types of outliers based on the conception of introducing different types of classification variables corresponding to the different types of outliers; the problem of outlier detection is converted into the computation of the corresponding posterior probabilities, and the algorithm for computing the posterior probabilities based on standard Gibbs sampler is designed. Secondly, we analyze the reasons of masking and swamping about detecting patches of additive outliers intensively; an unmasking Bayesian method for detecting additive outlier patches is proposed based on an adaptive Gibbs sampler. Thirdly, the correctness of the theories and methods proposed above is illustrated by simulated data and then by analyzing real GNSS observations, such as cycle slips detection in carrier phase data. Examples illustrate that the Bayesian methods for outliers detection in GNSS time series proposed by this paper are not only capable of detecting isolated outliers but also capable of detecting additive outlier patches. Furthermore, it can be successfully used to process cycle slips in phase data, which solves the problem of small cycle slips.

  5. [Standardization of technical methods for apple fluorescence canopy spectral detection].

    PubMed

    Zhu, Xi-Cun; Zhao, Geng-Xing; Lei, Tong; Wang, Ling; Dong, Fang; Wang, Jing-An

    2010-06-01

    Aiming at spectral detection of apple fluorescence canopy, the present paper carried out spectral detection tests under different weather conditions, different detection times, and different detection heights and angles to apple canopy in the two years of 2008 and 2009, so as to analyze impacts of these factors on apple canopy spectral characteristics and explore standardized spectral detection methods for apple fluorescence canopy. The results indicated the regularity in spectral reflectance of apple fluorescence canopy to a certain degree under different conditions, especially in the 760-1 350 nm near-infrared bands. The authors found that canopy spectral reflectance declined along with the decrease in sunshine and it is appropriate to detect canopy spectrum in sunny days with few clouds. In addition, spectral reflectance tended to be stable when the wind scale was below grade 2. The discrepancy of canopy spectra is small during the time period from 10:00 to 15:00 of a day compared to that of other times. For maintaining stable spectral curves, the height of detector to apple canopy needed to be adjusted to cover the whole canopy within the field of view according to detection angle of the detector. The vertical or approximately vertical detection was the best for canopy spectral reflectance acquisition. The standardization of technical methods of spectral detection for apple fluorescence canopy was proposed accordingly, which provided theoretical references for spectral detection and information extraction of apple tree canopy.

  6. Method of enhancing radiation response of radiation detection materials

    DOEpatents

    Miller, Steven D.

    1997-01-01

    The present invention is a method of increasing radiation response of a radiation detection material for a given radiation signal by first pressurizing the radiation detection material. Pressurization may be accomplished by any means including mechanical and/or hydraulic. In this application, the term "pressure" includes fluid pressure and/or mechanical stress.

  7. Method for the detection of Salmonella enterica serovar Enteritidis

    DOEpatents

    Agron, Peter G.; Andersen, Gary L.; Walker, Richard L.

    2008-10-28

    Described herein is the identification of a novel Salmonella enterica serovar Enteritidis locus that serves as a marker for DNA-based identification of this bacterium. In addition, three primer pairs derived from this locus that may be used in a nucleotide detection method to detect the presence of the bacterium are also disclosed herein.

  8. Radionuclide detection by inductively coupled plasma mass spectrometry: A comparison of atomic and radiation detection method

    SciTech Connect

    Smith, M.R.; Wyse, E.J.; Koppenaal, D.W.

    1991-04-01

    Radionuclide detection by mass spectrometric techniques offers inherent advantages over conventional radiation detection methods. Since radionuclides decay at variable rates (half-lives) and via various nuclear transformations (i.e. emission of alpha, beta, and/or gamma radiation) their determination via radiation detection depends not only on decay systematics but also on detector technology. Radionuclide detection by direct atom measurement, however, is dependent only on technique sensitivity and is indifferent to decay mode. Evaluation of inductively coupled plasma mass spectrometry (ICP/MS) indicates this method to be superior conventional radiation detection techniques for many radionuclides. This work discusses factors which influence detection by both methods. Illustrative applications of ICP/MS to the ultra-trace determination of several radionuclides, including {sup 129}I, are presented. 20 refs., 6 figs., 1 tab.

  9. A fast automatic target detection method for detecting ships in infrared scenes

    NASA Astrophysics Data System (ADS)

    Özertem, Kemal Arda

    2016-05-01

    Automatic target detection in infrared scenes is a vital task for many application areas like defense, security and border surveillance. For anti-ship missiles, having a fast and robust ship detection algorithm is crucial for overall system performance. In this paper, a straight-forward yet effective ship detection method for infrared scenes is introduced. First, morphological grayscale reconstruction is applied to the input image, followed by an automatic thresholding onto the suppressed image. For the segmentation step, connected component analysis is employed to obtain target candidate regions. At this point, it can be realized that the detection is defenseless to outliers like small objects with relatively high intensity values or the clouds. To deal with this drawback, a post-processing stage is introduced. For the post-processing stage, two different methods are used. First, noisy detection results are rejected with respect to target size. Second, the waterline is detected by using Hough transform and the detection results that are located above the waterline with a small margin are rejected. After post-processing stage, there are still undesired holes remaining, which cause to detect one object as multi objects or not to detect an object as a whole. To improve the detection performance, another automatic thresholding is implemented only to target candidate regions. Finally, two detection results are fused and post-processing stage is repeated to obtain final detection result. The performance of overall methodology is tested with real world infrared test data.

  10. Passive background correction method for spatially resolved detection

    DOEpatents

    Schmitt, Randal L.; Hargis, Jr., Philip J.

    2011-05-10

    A method for passive background correction during spatially or angularly resolved detection of emission that is based on the simultaneous acquisition of both the passive background spectrum and the spectrum of the target of interest.

  11. Nested methylation-specific polymerase chain reaction cancer detection method

    DOEpatents

    Belinsky, Steven A.; Palmisano, William A.

    2007-05-08

    A molecular marker-based method for monitoring and detecting cancer in humans. Aberrant methylation of gene promoters is a marker for cancer risk in humans. A two-stage, or "nested" polymerase chain reaction method is disclosed for detecting methylated DNA sequences at sufficiently high levels of sensitivity to permit cancer screening in biological fluid samples, such as sputum, obtained non-invasively. The method is for detecting the aberrant methylation of the p16 gene, O 6-methylguanine-DNA methyltransferase gene, Death-associated protein kinase gene, RAS-associated family 1 gene, or other gene promoters. The method offers a potentially powerful approach to population-based screening for the detection of lung and other cancers.

  12. An improved PCA method with application to boiler leak detection.

    PubMed

    Sun, Xi; Marquez, Horacio J; Chen, Tongwen; Riaz, Muhammad

    2005-07-01

    Principal component analysis (PCA) is a popular fault detection technique. It has been widely used in process industries, especially in the chemical industry. In industrial applications, achieving a sensitive system capable of detecting incipient faults, which maintains the false alarm rate to a minimum, is a crucial issue. Although a lot of research has been focused on these issues for PCA-based fault detection and diagnosis methods, sensitivity of the fault detection scheme versus false alarm rate continues to be an important issue. In this paper, an improved PCA method is proposed to address this problem. In this method, a new data preprocessing scheme and a new fault detection scheme designed for Hotelling's T2 as well as the squared prediction error are developed. A dynamic PCA model is also developed for boiler leak detection. This new method is applied to boiler water/steam leak detection with real data from Syncrude Canada's utility plant in Fort McMurray, Canada. Our results demonstrate that the proposed method can effectively reduce false alarm rate, provide effective and correct leak alarms, and give early warning to operators.

  13. A new ultrasound based method for rapid microorganism detection

    NASA Astrophysics Data System (ADS)

    Shukla, Shiva Kant; Segura, Luis Elvira; Sánchez, Carlos José Sierra; López, Pablo Resa

    2012-05-01

    A new method for rapid detection of catalase positive microorganisms by using an ultrasonic measuring method is proposed in this work. The developed technique is based on the detection of oxygen bubbles produced by the hydrolysis of hydrogen peroxide induced by the enzyme catalase which is present in many microorganisms. The bubbles are trapped in a media based on agar gel which was especially developed for microbiological evaluation. It is found that microorganism concentrations of the order of 105 c.f.u./ml can be detected by using this method. The results obtained show up that the proposed method is competitive with other modern commercial methods like luminescence by ATP system. The method can also be used for characterization of enzyme activity.

  14. Recent developments in detection methods for microfabricated analytical devices.

    PubMed

    Schwarz, M A; Hauser, P C

    2001-09-01

    Sensitive detection in microfluidic analytical devices is a challenge because of the extremely small detection volumes available. Considerable efforts have been made lately to further address this aspect and to investigate techniques other than fluorescence. Among the newly introduced techniques are the optical methods of chemiluminescence, refraction and thermooptics, as well as the electrochemical methods of amperometry, conductimetry and potentiometry. Developments are also in progress to create miniaturized plasma-emission spectrometers and sensitive detectors for gas-chromatographic separations.

  15. Improved Hidden-Markov-Model Method Of Detecting Faults

    NASA Technical Reports Server (NTRS)

    Smyth, Padhraic J.

    1994-01-01

    Method of automated, continuous monitoring to detect faults in complicated dynamic system based on hidden-Markov-model (HMM) approach. Simpler than another, recently proposed HMM method, but retains advantages of that method, including low susceptibility to false alarms, no need for mathematical model of dynamics of system under normal or faulty conditions, and ability to detect subtle changes in characteristics of monitored signals. Examples of systems monitored by use of this method include motors, turbines, and pumps critical in their applications; chemical-processing plants; powerplants; and biomedical systems.

  16. Method for edge detection in images using fuzzy relation

    NASA Astrophysics Data System (ADS)

    Nieradka, Grzegorz

    2008-01-01

    Edge detection is one of the most important tasks in machine vision and image processing. The paper presents novel approach to construction of algorithm for detection edges in images. In order to solve the problem the concepts of the fuzzy similarity relation and homogeneity region were exploited. The results of application of the proposed edge calculation method are presented in this paper. Additionally, this paper presents an interesting artistic effect obtained by application of the image processing method based on such the detection of edges. Possible artistic effects of application of this algorithm are exemplified.

  17. Other Notable Methods of Membrane Protein Detection: A Brief Review.

    PubMed

    Kurien, Biji T; Scofield, R Hal

    2015-01-01

    Several techniques have been employed to detect proteins on membranes. These include the use of quantum dot luminescent labels, oxyblot immunochemical detection, polymer immunocomplexes, "coupled" probing approach, in situ renaturation of proteins for detecting enzyme activities in crude or purified preparations, immunochromatographic assay, western-phosphatase assay, and use of Congo red dye (a cosmetic color named Alta), Pro-Q Emerald 488 dye, or amine-reactive dye in combination with alkaline phosphatase- and horseradish peroxidase-antibody conjugates for the simultaneous trichromatic fluorescence detection of proteins. Several methods have been used to improve the detection of proteins on membranes, including glutaraldehyde treatment of nitrocellulose blots, elimination of keratin artifacts in immunoblots probed with polyclonal antibodies, and washing of immunoblots with excessive water and manipulation of Tween-20 in wash buffer. These methods are briefly reviewed in this chapter. PMID:26139283

  18. Automatic landslide and mudflow detection method via multichannel sparse representation

    NASA Astrophysics Data System (ADS)

    Chao, Chen; Zhou, Jianjun; Hao, Zhuo; Sun, Bo; He, Jun; Ge, Fengxiang

    2015-10-01

    Landslide and mudflow detection is an important application of aerial images and high resolution remote sensing images, which is crucial for national security and disaster relief. Since the high resolution images are often large in size, it's necessary to develop an efficient algorithm for landslide and mudflow detection. Based on the theory of sparse representation and, we propose a novel automatic landslide and mudflow detection method in this paper, which combines multi-channel sparse representation and eight neighbor judgment methods. The whole process of the detection is totally automatic. We make the experiment on a high resolution image of ZhouQu district of Gansu province in China on August, 2010 and get a promising result which proved the effective of using sparse representation on landslide and mudflow detection.

  19. Efficient method of image edge detection based on FSVM

    NASA Astrophysics Data System (ADS)

    Cai, Aiping; Xiong, Xiaomei

    2013-07-01

    For efficient object cover edge detection in digital images, this paper studied traditional methods and algorithm based on SVM. It analyzed Canny edge detection algorithm existed some pseudo-edge and poor anti-noise capability. In order to provide a reliable edge extraction method, propose a new detection algorithm based on FSVM. Which contains several steps: first, trains classify sample and gives the different membership function to different samples. Then, a new training sample is formed by increase the punishment some wrong sub-sample, and use the new FSVM classification model for train and test them. Finally the edges are extracted of the object image by using the model. Experimental result shows that good edge detection image will be obtained and adding noise experiments results show that this method has good anti-noise.

  20. Methods, systems and devices for detecting and locating ferromagnetic objects

    DOEpatents

    Roybal, Lyle Gene [Idaho Falls, ID; Kotter, Dale Kent [Shelley, ID; Rohrbaugh, David Thomas [Idaho Falls, ID; Spencer, David Frazer [Idaho Falls, ID

    2010-01-26

    Methods for detecting and locating ferromagnetic objects in a security screening system. One method includes a step of acquiring magnetic data that includes magnetic field gradients detected during a period of time. Another step includes representing the magnetic data as a function of the period of time. Another step includes converting the magnetic data to being represented as a function of frequency. Another method includes a step of sensing a magnetic field for a period of time. Another step includes detecting a gradient within the magnetic field during the period of time. Another step includes identifying a peak value of the gradient detected during the period of time. Another step includes identifying a portion of time within the period of time that represents when the peak value occurs. Another step includes configuring the portion of time over the period of time to represent a ratio.

  1. A Method for Detecting Positive Growth Autocorrelation without Marking Individuals

    PubMed Central

    Brooks, Mollie E.; McCoy, Michael W.; Bolker, Benjamin M.

    2013-01-01

    In most ecological studies, within-group variation is a nuisance that obscures patterns of interest and reduces statistical power. However, patterns of within-group variability often contain information about ecological processes. In particular, such patterns can be used to detect positive growth autocorrelation (consistent variation in growth rates among individuals in a cohort across time), even in samples of unmarked individuals. Previous methods for detecting autocorrelated growth required data from marked individuals. We propose a method that requires only estimates of within-cohort variance through time, using maximum likelihood methods to obtain point estimates and confidence intervals of the correlation parameter. We test our method on simulated data sets and determine the loss in statistical power due to the inability to identify individuals. We show how to accommodate nonlinear growth trajectories and test the effects of size-dependent mortality on our method's accuracy. The method can detect significant growth autocorrelation at moderate levels of autocorrelation with moderate-sized cohorts (for example, statistical power of 80% to detect growth autocorrelation ρ2 = 0.5 in a cohort of 100 individuals measured on 16 occasions). We present a case study of growth in the red-eyed tree frog. Better quantification of the processes driving size variation will help ecologists improve predictions of population dynamics. This work will help researchers to detect growth autocorrelation in cases where marking is logistically infeasible or causes unacceptable decreases in the fitness of marked individuals. PMID:24204620

  2. A method for detecting positive growth autocorrelation without marking individuals.

    PubMed

    Brooks, Mollie E; McCoy, Michael W; Bolker, Benjamin M

    2013-01-01

    In most ecological studies, within-group variation is a nuisance that obscures patterns of interest and reduces statistical power. However, patterns of within-group variability often contain information about ecological processes. In particular, such patterns can be used to detect positive growth autocorrelation (consistent variation in growth rates among individuals in a cohort across time), even in samples of unmarked individuals. Previous methods for detecting autocorrelated growth required data from marked individuals. We propose a method that requires only estimates of within-cohort variance through time, using maximum likelihood methods to obtain point estimates and confidence intervals of the correlation parameter. We test our method on simulated data sets and determine the loss in statistical power due to the inability to identify individuals. We show how to accommodate nonlinear growth trajectories and test the effects of size-dependent mortality on our method's accuracy. The method can detect significant growth autocorrelation at moderate levels of autocorrelation with moderate-sized cohorts (for example, statistical power of 80% to detect growth autocorrelation ρ (2) = 0.5 in a cohort of 100 individuals measured on 16 occasions). We present a case study of growth in the red-eyed tree frog. Better quantification of the processes driving size variation will help ecologists improve predictions of population dynamics. This work will help researchers to detect growth autocorrelation in cases where marking is logistically infeasible or causes unacceptable decreases in the fitness of marked individuals. PMID:24204620

  3. Methods for detection of GMOs in food and feed.

    PubMed

    Marmiroli, Nelson; Maestri, Elena; Gullì, Mariolina; Malcevschi, Alessio; Peano, Clelia; Bordoni, Roberta; De Bellis, Gianluca

    2008-10-01

    This paper reviews aspects relevant to detection and quantification of genetically modified (GM) material within the feed/food chain. The GM crop regulatory framework at the international level is evaluated with reference to traceability and labelling. Current analytical methods for the detection, identification, and quantification of transgenic DNA in food and feed are reviewed. These methods include quantitative real-time PCR, multiplex PCR, and multiplex real-time PCR. Particular attention is paid to methods able to identify multiple GM events in a single reaction and to the development of microdevices and microsensors, though they have not been fully validated for application.

  4. Method of detecting genetic translocations identified with chromosomal abnormalities

    DOEpatents

    Gray, Joe W.; Pinkel, Daniel; Tkachuk, Douglas

    2001-01-01

    Methods and compositions for staining based upon nucleic acid sequence that employ nucleic acid probes are provided. Said methods produce staining patterns that can be tailored for specific cytogenetic analyses. Said probes are appropriate for in situ hybridization and stain both interphase and metaphase chromosomal material with reliable signals. The nucleic acid probes are typically of a complexity greater than 50 kb, the complexity depending upon the cytogenetic application. Methods and reagents are provided for the detection of genetic rearrangements. Probes and test kits are provided for use in detecting genetic rearrangements, particularly for use in tumor cytogenetics, in the detection of disease related loci, specifically cancer, such as chronic myelogenous leukemia (CML) and for biological dosimetry. Methods and reagents are described for cytogenetic research, for the differentiation of cytogenetically similar but genetically different diseases, and for many prognostic and diagnostic applications.

  5. A Comparison of Satellite-Based Multilayered Cloud Detection Methods

    NASA Technical Reports Server (NTRS)

    Minnis, Patrick; Chang, Fu-Lung; Khaiyer, Mandana M.; Ayers, Jeffrey K.; Palikonda, Rabindra; Nordeen, Michele L.; Spangenberg, Douglas A.

    2007-01-01

    Both techniques show skill in detecting multilayered clouds, but they disagree more than 50% of the time. BTD method tends to detect more ML clouds than CO2 method and has slightly higher detection accuracy. CO2 method might be better for minimizing false positives, but further study is needed. Neither method as been optimized for GOES data. BTD technique developed on AVHRR, better BTD signals & resolution. CO2 developed on MODIS, better resolution & 4 CO2 channels. Many additional comparisons with ARSCL data will be used to optimize both techniques. A combined technique will be examined using MODIS & Meteosat-8 data. After optimization, the techniques will be implemented in the ARM operational satellite cloud processing.

  6. A Bayesian Outbreak Detection Method for Influenza-Like Illness

    PubMed Central

    García, Yury E.; Christen, J. Andrés; Capistrán, Marcos A.

    2015-01-01

    Epidemic outbreak detection is an important problem in public health and the development of reliable methods for outbreak detection remains an active research area. In this paper we introduce a Bayesian method to detect outbreaks of influenza-like illness from surveillance data. The rationale is that, during the early phase of the outbreak, surveillance data changes from autoregressive dynamics to a regime of exponential growth. Our method uses Bayesian model selection and Bayesian regression to identify the breakpoint. No free parameters need to be tuned. However, historical information regarding influenza-like illnesses needs to be incorporated into the model. In order to show and discuss the performance of our method we analyze synthetic, seasonal, and pandemic outbreak data. PMID:26425552

  7. Method of detecting genetic deletions identified with chromosomal abnormalities

    DOEpatents

    Gray, Joe W; Pinkel, Daniel; Tkachuk, Douglas

    2013-11-26

    Methods and compositions for staining based upon nucleic acid sequence that employ nucleic acid probes are provided. Said methods produce staining patterns that can be tailored for specific cytogenetic analyzes. Said probes are appropriate for in situ hybridization and stain both interphase and metaphase chromosomal material with reliable signals. The nucleic acids probes are typically of a complexity greater tha 50 kb, the complexity depending upon the cytogenetic application. Methods and reagents are provided for the detection of genetic rearrangements. Probes and test kits are provided for use in detecting genetic rearrangements, particlularly for use in tumor cytogenetics, in the detection of disease related loci, specifically cancer, such as chronic myelogenous leukemia (CML) and for biological dosimetry. Methods and reagents are described for cytogenetic research, for the differentiation of cytogenetically similar ut genetically different diseases, and for many prognostic and diagnostic applications.

  8. Transistor-based particle detection systems and methods

    DOEpatents

    Jain, Ankit; Nair, Pradeep R.; Alam, Muhammad Ashraful

    2015-06-09

    Transistor-based particle detection systems and methods may be configured to detect charged and non-charged particles. Such systems may include a supporting structure contacting a gate of a transistor and separating the gate from a dielectric of the transistor, and the transistor may have a near pull-in bias and a sub-threshold region bias to facilitate particle detection. The transistor may be configured to change current flow through the transistor in response to a change in stiffness of the gate caused by securing of a particle to the gate, and the transistor-based particle detection system may configured to detect the non-charged particle at least from the change in current flow.

  9. Methods and systems for remote detection of gases

    DOEpatents

    Johnson, Timothy J.

    2007-11-27

    Novel systems and methods for remotely detecting at least one constituent of a gas via infrared detection are provided. A system includes at least one extended source of broadband infrared radiation and a spectrally sensitive receiver positioned remotely from the source. The source and the receiver are oriented such that a surface of the source is in the field of view of the receiver. The source includes a heating component thermally coupled to the surface, and the heating component is configured to heat the surface to a temperature above ambient temperature. The receiver is operable to collect spectral infrared absorption data representative of a gas present between the source and the receiver. The invention advantageously overcomes significant difficulties associated with active infrared detection techniques known in the art, and provides an infrared detection technique with a much greater sensitivity than passive infrared detection techniques known in the art.

  10. Methods and systems for remote detection of gases

    DOEpatents

    Johnson, Timothy J

    2012-09-18

    Novel systems and methods for remotely detecting at least one constituent of a gas via infrared detection are provided. A system includes at least one extended source of broadband infrared radiation and a spectrally sensitive receiver positioned remotely from the source. The source and the receiver are oriented such that a surface of the source is in the field of view of the receiver. The source includes a heating component thermally coupled to the surface, and the heating component is configured to heat the surface to a temperature above ambient temperature. The receiver is operable to collect spectral infrared absorption data representative of a gas present between the source and the receiver. The invention advantageously overcomes significant difficulties associated with active infrared detection techniques known in the art, and provides an infrared detection technique with a much greater sensitivity than passive infrared detection techniques known in the art.

  11. Detecting diversity: emerging methods to estimate species diversity.

    PubMed

    Iknayan, Kelly J; Tingley, Morgan W; Furnas, Brett J; Beissinger, Steven R

    2014-02-01

    Estimates of species richness and diversity are central to community and macroecology and are frequently used in conservation planning. Commonly used diversity metrics account for undetected species primarily by controlling for sampling effort. Yet the probability of detecting an individual can vary among species, observers, survey methods, and sites. We review emerging methods to estimate alpha, beta, gamma, and metacommunity diversity through hierarchical multispecies occupancy models (MSOMs) and multispecies abundance models (MSAMs) that explicitly incorporate observation error in the detection process for species or individuals. We examine advantages, limitations, and assumptions of these detection-based hierarchical models for estimating species diversity. Accounting for imperfect detection using these approaches has influenced conclusions of comparative community studies and creates new opportunities for testing theory. PMID:24315534

  12. Visceral perception versus visceral detection: disentangling methods and assumptions.

    PubMed

    Pennebaker, J W; Hoover, C W

    1984-09-01

    A within-subject experiment compared three paradigms commonly used in visceral perception: self-report, heartbeat tracking, and signal detection. Eighteen undergraduates estimated heart rate using each technique while engaging in a number of separate tasks conducted a week apart. Although all three techniques significantly tapped accuracy of heart rate perception, only the self-report and signal detection methods were reliable over time. Most important, there was no relationship involving any of the methods in measuring accuracy. The findings suggest some fundamental differences in the assumptions and perceptual properties of the various paradigms. A distinction is made between visceral perception and detection. Perception implies the subject's use of both internal physiological and external environmental information in the perception of visceral state. Detection connotes the subject's use of only physiological information--to the exclusion of all other factors. The relevance of these approaches for biofeedback and real-world symptom perception is discussed.

  13. New Optical Methods for Liveness Detection on Fingers

    PubMed Central

    Dolezel, Michal; Vana, Jan; Brezinova, Eva; Yim, Jaegeol; Shim, Kyubark

    2013-01-01

    This paper is devoted to new optical methods, which are supposed to be used for liveness detection on fingers. First we describe the basics about fake finger use in fingerprint recognition process and the possibilities of liveness detection. Then we continue with introducing three new liveness detection methods, which we developed and tested in the scope of our research activities—the first one is based on measurement of the pulse, the second one on variations of optical characteristics caused by pressure change, and the last one is based on reaction of skin to illumination with different wavelengths. The last part deals with the influence of skin diseases on fingerprint recognition, especially on liveness detection. PMID:24151584

  14. Detection of forced oscillations in power systems with multichannel methods

    SciTech Connect

    Follum, James D.

    2015-09-30

    The increasing availability of high fidelity, geographically dispersed measurements in power systems improves the ability of researchers and engineers to study dynamic behaviors in the grid. One such behavior that is garnering increased attention is the presence of forced oscillations. Power system engineers are interested in forced oscillations because they are often symptomatic of the malfunction or misoperation of equipment. Though the resulting oscillation is not always large in amplitude, the root cause may be serious. In this report, multi-channel forced oscillation detection methods are developed. These methods leverage previously developed detection approaches based on the periodogram and spectral-coherence. Making use of geographically distributed channels of data is shown to improved detection performance and shorten the delay before an oscillation can be detected in the online environment. Results from simulated and measured power system data are presented.

  15. A high-throughput multiplex method adapted for GMO detection.

    PubMed

    Chaouachi, Maher; Chupeau, Gaëlle; Berard, Aurélie; McKhann, Heather; Romaniuk, Marcel; Giancola, Sandra; Laval, Valérie; Bertheau, Yves; Brunel, Dominique

    2008-12-24

    A high-throughput multiplex assay for the detection of genetically modified organisms (GMO) was developed on the basis of the existing SNPlex method designed for SNP genotyping. This SNPlex assay allows the simultaneous detection of up to 48 short DNA sequences (approximately 70 bp; "signature sequences") from taxa endogenous reference genes, from GMO constructions, screening targets, construct-specific, and event-specific targets, and finally from donor organisms. This assay avoids certain shortcomings of multiplex PCR-based methods already in widespread use for GMO detection. The assay demonstrated high specificity and sensitivity. The results suggest that this assay is reliable, flexible, and cost- and time-effective for high-throughput GMO detection.

  16. Maximum patch method for directional dark matter detection

    SciTech Connect

    Henderson, Shawn; Monroe, Jocelyn; Fisher, Peter

    2008-07-01

    Present and planned dark matter detection experiments search for WIMP-induced nuclear recoils in poorly known background conditions. In this environment, the maximum gap statistical method provides a way of setting more sensitive cross section upper limits by incorporating known signal information. We give a recipe for the numerical calculation of upper limits for planned directional dark matter detection experiments, that will measure both recoil energy and angle, based on the gaps between events in two-dimensional phase space.

  17. Safety assessment and detection methods of genetically modified organisms.

    PubMed

    Xu, Rong; Zheng, Zhe; Jiao, Guanglian

    2014-01-01

    Genetically modified organisms (GMOs), are gaining importance in agriculture as well as the production of food and feed. Along with the development of GMOs, health and food safety concerns have been raised. These concerns for these new GMOs make it necessary to set up strict system on food safety assessment of GMOs. The food safety assessment of GMOs, current development status of safety and precise transgenic technologies and GMOs detection have been discussed in this review. The recent patents about GMOs and their detection methods are also reviewed. This review can provide elementary introduction on how to assess and detect GMOs. PMID:25342147

  18. A generic nuclei detection method for histopathological breast images

    NASA Astrophysics Data System (ADS)

    Kost, Henning; Homeyer, André; Bult, Peter; Balkenhol, Maschenka C. A.; van der Laak, Jeroen A. W. M.; Hahn, Horst K.

    2016-03-01

    The detection of cell nuclei plays a key role in various histopathological image analysis problems. Considering the high variability of its applications, we propose a novel generic and trainable detection approach. Adaption to specific nuclei detection tasks is done by providing training samples. A trainable deconvolution and classification algorithm is used to generate a probability map indicating the presence of a nucleus. The map is processed by an extended watershed segmentation step to identify the nuclei positions. We have tested our method on data sets with different stains and target nuclear types. We obtained F1-measures between 0.83 and 0.93.

  19. Method and automated apparatus for detecting coliform organisms

    NASA Technical Reports Server (NTRS)

    Dill, W. P.; Taylor, R. E.; Jeffers, E. L. (Inventor)

    1980-01-01

    Method and automated apparatus are disclosed for determining the time of detection of metabolically produced hydrogen by coliform bacteria cultured in an electroanalytical cell from the time the cell is inoculated with the bacteria. The detection time data provides bacteria concentration values. The apparatus is sequenced and controlled by a digital computer to discharge a spent sample, clean and sterilize the culture cell, provide a bacteria nutrient into the cell, control the temperature of the nutrient, inoculate the nutrient with a bacteria sample, measures the electrical potential difference produced by the cell, and measures the time of detection from inoculation.

  20. Safety assessment and detection methods of genetically modified organisms.

    PubMed

    Xu, Rong; Zheng, Zhe; Jiao, Guanglian

    2014-01-01

    Genetically modified organisms (GMOs), are gaining importance in agriculture as well as the production of food and feed. Along with the development of GMOs, health and food safety concerns have been raised. These concerns for these new GMOs make it necessary to set up strict system on food safety assessment of GMOs. The food safety assessment of GMOs, current development status of safety and precise transgenic technologies and GMOs detection have been discussed in this review. The recent patents about GMOs and their detection methods are also reviewed. This review can provide elementary introduction on how to assess and detect GMOs.

  1. Machine Learning Methods for Attack Detection in the Smart Grid.

    PubMed

    Ozay, Mete; Esnaola, Inaki; Yarman Vural, Fatos Tunay; Kulkarni, Sanjeev R; Poor, H Vincent

    2016-08-01

    Attack detection problems in the smart grid are posed as statistical learning problems for different attack scenarios in which the measurements are observed in batch or online settings. In this approach, machine learning algorithms are used to classify measurements as being either secure or attacked. An attack detection framework is provided to exploit any available prior knowledge about the system and surmount constraints arising from the sparse structure of the problem in the proposed approach. Well-known batch and online learning algorithms (supervised and semisupervised) are employed with decision- and feature-level fusion to model the attack detection problem. The relationships between statistical and geometric properties of attack vectors employed in the attack scenarios and learning algorithms are analyzed to detect unobservable attacks using statistical learning methods. The proposed algorithms are examined on various IEEE test systems. Experimental analyses show that machine learning algorithms can detect attacks with performances higher than attack detection algorithms that employ state vector estimation methods in the proposed attack detection framework.

  2. Machine Learning Methods for Attack Detection in the Smart Grid.

    PubMed

    Ozay, Mete; Esnaola, Inaki; Yarman Vural, Fatos Tunay; Kulkarni, Sanjeev R; Poor, H Vincent

    2016-08-01

    Attack detection problems in the smart grid are posed as statistical learning problems for different attack scenarios in which the measurements are observed in batch or online settings. In this approach, machine learning algorithms are used to classify measurements as being either secure or attacked. An attack detection framework is provided to exploit any available prior knowledge about the system and surmount constraints arising from the sparse structure of the problem in the proposed approach. Well-known batch and online learning algorithms (supervised and semisupervised) are employed with decision- and feature-level fusion to model the attack detection problem. The relationships between statistical and geometric properties of attack vectors employed in the attack scenarios and learning algorithms are analyzed to detect unobservable attacks using statistical learning methods. The proposed algorithms are examined on various IEEE test systems. Experimental analyses show that machine learning algorithms can detect attacks with performances higher than attack detection algorithms that employ state vector estimation methods in the proposed attack detection framework. PMID:25807571

  3. An adaptive high and low impedance fault detection method

    SciTech Connect

    Yu, D.C. ); Khan, S.H. )

    1994-10-01

    An integrated high impedance fault (HIF) and low impedance fault (LIF) detection method is proposed in this paper. For a HIF detection, the proposed technique is based on a number of characteristics of the HIF current. These characteristics are: fault current magnitude, magnitude of the 3rd harmonic current, magnitude of the 5th harmonic current, the angle of the third harmonic current, the angle difference between the third harmonics current and the fundamental voltage, negative sequence current of HIF. These characteristics are identified by modeling the distribution feeders in EMTP. Apart from these characteristics, the above ambient (average) negative sequence current is also considered. An adjustable block out region around the average load current is provided. The average load current is calculated at every 18,000 cycles (5 minutes) interval. This adaptive feature will not only make the proposed scheme more sensitive to the low fault current, but it will also prevent the relay from tripping during the normal load current. In this paper, the logic circuit required for implementing the proposed HIF detection methods is also included. With minimal modifications, the logic developed for the HIF detection can be applied for the low impedance fault (LIF) detection. A complete logic circuit which detects both the HIF and LIF is proposed. Using this combined logic, the need of installing separate devices for HIF and LIF detection can be eliminated.

  4. Heart beat detection using a multimodal data coupling method.

    PubMed

    Mollakazemi, M Javad; Atyabi, S Abbas; Ghaffari, Ali

    2015-08-01

    The most straightforward method for heart beat estimation is R-peak detection based on an electrocardiogram (ECG) signal. Current R-peak detection methods do not work properly when the ECG signal is contaminated or missing, which leads to the incorrect estimation of the heart rate. This raises the need for reliable algorithms which can locate heart beats in continuous long-term multimodal data, allowing robust analysis.In this paper, three peak detectors are evaluated for heart beat detection using various cardiovascular signals. One of the peak detectors is a new general peak detector (GPD) algorithm which is applicable on ECG and other pulsatile signals to compensate for the limitation of QRS detection. This peak detector algorithm is adaptive and independently finds amplitude characteristics for every recording, while not tuned for ECG or other pulsatile signals. Three strategies, which are different disciplines of detectors, are then proposed while the fusion method remains the same in all strategies. In the first strategy, the ECG and the lowest-indexed signal of general blood pressure (BP), arterial blood pressure (ART) and pulmonary arterial pressure (PAP) are processed through gqrs and wabp (from the PhysioNet library), respectively. In the second strategy, all beats in different signals are detected by GPD. In the third strategy, ECG and other signals are processed by gqrs and GPD, respectively. In all three strategies two criteria are used in order to fuse the detections. The first criterion is based on the number of candidate detections in a specific time period, based on which signals of interest are selected. The second fusion criterion is based on the regularity of the derived intervals between subsequent candidate detections. If the number of detections in ECG and one of BP, ART and PAP signals have reasonable physiological range, a new signal is generated in which they are coupled with each other. Heart beats can more easily be detected in noisy

  5. Efficient method for events detection in phonocardiographic signals

    NASA Astrophysics Data System (ADS)

    Martinez-Alajarin, Juan; Ruiz-Merino, Ramon

    2005-06-01

    The auscultation of the heart is still the first basic analysis tool used to evaluate the functional state of the heart, as well as the first indicator used to submit the patient to a cardiologist. In order to improve the diagnosis capabilities of auscultation, signal processing algorithms are currently being developed to assist the physician at primary care centers for adult and pediatric population. A basic task for the diagnosis from the phonocardiogram is to detect the events (main and additional sounds, murmurs and clicks) present in the cardiac cycle. This is usually made by applying a threshold and detecting the events that are bigger than the threshold. However, this method usually does not allow the detection of the main sounds when additional sounds and murmurs exist, or it may join several events into a unique one. In this paper we present a reliable method to detect the events present in the phonocardiogram, even in the presence of heart murmurs or additional sounds. The method detects relative maxima peaks in the amplitude envelope of the phonocardiogram, and computes a set of parameters associated with each event. Finally, a set of characteristics is extracted from each event to aid in the identification of the events. Besides, the morphology of the murmurs is also detected, which aids in the differentiation of different diseases that can occur in the same temporal localization. The algorithms have been applied to real normal heart sounds and murmurs, achieving satisfactory results.

  6. Radial line method for rear-view mirror distortion detection

    NASA Astrophysics Data System (ADS)

    Rahmah, Fitri; Kusumawardhani, Apriani; Setijono, Heru; Hatta, Agus M.; Irwansyah, .

    2015-01-01

    An image of the object can be distorted due to a defect in a mirror. A rear-view mirror is an important component for the vehicle safety. One of standard parameters of the rear-view mirror is a distortion factor. This paper presents a radial line method for distortion detection of the rear-view mirror. The rear-view mirror was tested for the distortion detection by using a system consisting of a webcam sensor and an image-processing unit. In the image-processing unit, the captured image from the webcam were pre-processed by using smoothing and sharpening techniques and then a radial line method was used to define the distortion factor. It was demonstrated successfully that the radial line method could be used to define the distortion factor. This detection system is useful to be implemented such as in Indonesian's automotive component industry while the manual inspection still be used.

  7. Advances in nucleic acid-based detection methods.

    PubMed Central

    Wolcott, M J

    1992-01-01

    Laboratory techniques based on nucleic acid methods have increased in popularity over the last decade with clinical microbiologists and other laboratory scientists who are concerned with the diagnosis of infectious agents. This increase in popularity is a result primarily of advances made in nucleic acid amplification and detection techniques. Polymerase chain reaction, the original nucleic acid amplification technique, changed the way many people viewed and used nucleic acid techniques in clinical settings. After the potential of polymerase chain reaction became apparent, other methods of nucleic acid amplification and detection were developed. These alternative nucleic acid amplification methods may become serious contenders for application to routine laboratory analyses. This review presents some background information on nucleic acid analyses that might be used in clinical and anatomical laboratories and describes some recent advances in the amplification and detection of nucleic acids. PMID:1423216

  8. Comparison of formant detection methods used in speech processing applications

    NASA Astrophysics Data System (ADS)

    Belean, Bogdan

    2013-11-01

    The paper describes time frequency representations of speech signal together with the formant significance in speech processing applications. Speech formants can be used in emotion recognition, sex discrimination or diagnosing different neurological diseases. Taking into account the various applications of formant detection in speech signal, two methods for detecting formants are presented. First, the poles resulted after a complex analysis of LPC coefficients are used for formants detection. The second approach uses the Kalman filter for formant prediction along the speech signal. Results are presented for both approaches on real life speech spectrograms. A comparison regarding the features of the proposed methods is also performed, in order to establish which method is more suitable in case of different speech processing applications.

  9. A modified agar plate method for detection of Strongyloides stercoralis.

    PubMed

    Koga, K; Kasuya, S; Khamboonruang, C; Sukhavat, K; Ieda, M; Takatsuka, N; Kita, K; Ohtomo, H

    1991-10-01

    The agar plate method is a new technique with high detection rates for coprological diagnosis of human strongyloidiasis. This report details modifications of the technique and establishes a standardized procedure. We recommend that all plates should be carefully observed using a microscope because macroscopic observation can lead to false negative results. It is also advisable to pour formalin solution directly into microscopically positive dishes to collect worms by sedimentation. This procedure enables one to observe worms otherwise hidden. Sealing dishes with adhesive tape prevents larvae from crawling out of the dishes, eliminating any possibility in the reduction of detection rates, and greatly improves the safety conditions for the technician performing the procedure. We consider the agar plate method to be superior to the filter paper method in detecting Strongyloides, and we believe that it will eventually become the technique of choice. PMID:1951861

  10. Detection of fatigue cracks by nondestructive testing methods

    NASA Technical Reports Server (NTRS)

    Anderson, R. T.; Delacy, T. J.; Stewart, R. C.

    1973-01-01

    The effectiveness was assessed of various NDT methods to detect small tight cracks by randomly introducing fatigue cracks into aluminum sheets. The study included optimizing NDT methods calibrating NDT equipment with fatigue cracked standards, and evaluating a number of cracked specimens by the optimized NDT methods. The evaluations were conducted by highly trained personnel, provided with detailed procedures, in order to minimize the effects of human variability. These personnel performed the NDT on the test specimens without knowledge of the flaw locations and reported on the flaws detected. The performance of these tests was measured by comparing the flaws detected against the flaws present. The principal NDT methods utilized were radiographic, ultrasonic, penetrant, and eddy current. Holographic interferometry, acoustic emission monitoring, and replication methods were also applied on a reduced number of specimens. Generally, the best performance was shown by eddy current, ultrasonic, penetrant and holographic tests. Etching provided no measurable improvement, while proof loading improved flaw detectability. Data are shown that quantify the performances of the NDT methods applied.

  11. Method for predicting peptide detection in mass spectrometry

    DOEpatents

    Kangas, Lars [West Richland, WA; Smith, Richard D [Richland, WA; Petritis, Konstantinos [Richland, WA

    2010-07-13

    A method of predicting whether a peptide present in a biological sample will be detected by analysis with a mass spectrometer. The method uses at least one mass spectrometer to perform repeated analysis of a sample containing peptides from proteins with known amino acids. The method then generates a data set of peptides identified as contained within the sample by the repeated analysis. The method then calculates the probability that a specific peptide in the data set was detected in the repeated analysis. The method then creates a plurality of vectors, where each vector has a plurality of dimensions, and each dimension represents a property of one or more of the amino acids present in each peptide and adjacent peptides in the data set. Using these vectors, the method then generates an algorithm from the plurality of vectors and the calculated probabilities that specific peptides in the data set were detected in the repeated analysis. The algorithm is thus capable of calculating the probability that a hypothetical peptide represented as a vector will be detected by a mass spectrometry based proteomic platform, given that the peptide is present in a sample introduced into a mass spectrometer.

  12. An infrared spectroscopy method to detect ammonia in gastric juice.

    PubMed

    Giovannozzi, Andrea M; Pennecchi, Francesca; Muller, Paul; Balma Tivola, Paolo; Roncari, Silvia; Rossi, Andrea M

    2015-11-01

    Ammonia in gastric juice is considered a potential biomarker for Helicobacter pylori infection and as a factor contributing to gastric mucosal injury. High ammonia concentrations are also found in patients with chronic renal failure, peptic ulcer disease, and chronic gastritis. Rapid and specific methods for ammonia detection are urgently required by the medical community. Here we present a method to detect ammonia directly in gastric juice based on Fourier transform infrared spectroscopy. The ammonia dissolved in biological liquid samples as ammonium ion was released in air as a gas by the shifting of the pH equilibrium of the ammonium/ammonia reaction and was detected in line by a Fourier transform infrared spectroscopy system equipped with a gas cell for the quantification. The method developed provided high sensitivity and selectivity in ammonia detection both in pure standard solutions and in a simulated gastric juice matrix over the range of diagnostic concentrations tested. Preliminary analyses were also performed on real gastric juice samples from patients with gastric mucosal injury and with symptoms of H. pylori infection, and the results were in agreement with the clinicopathology information. The whole analysis, performed in less than 10 min, can be directly applied on the sample without extraction procedures and it ensures high specificity of detection because of the ammonia fingerprint absorption bands in the infrared spectrum. This method could be easily used with endoscopy instrumentation to provide information in real time and would enable the endoscopist to improve and integrate gastroscopic examinations. PMID:26377936

  13. An infrared spectroscopy method to detect ammonia in gastric juice.

    PubMed

    Giovannozzi, Andrea M; Pennecchi, Francesca; Muller, Paul; Balma Tivola, Paolo; Roncari, Silvia; Rossi, Andrea M

    2015-11-01

    Ammonia in gastric juice is considered a potential biomarker for Helicobacter pylori infection and as a factor contributing to gastric mucosal injury. High ammonia concentrations are also found in patients with chronic renal failure, peptic ulcer disease, and chronic gastritis. Rapid and specific methods for ammonia detection are urgently required by the medical community. Here we present a method to detect ammonia directly in gastric juice based on Fourier transform infrared spectroscopy. The ammonia dissolved in biological liquid samples as ammonium ion was released in air as a gas by the shifting of the pH equilibrium of the ammonium/ammonia reaction and was detected in line by a Fourier transform infrared spectroscopy system equipped with a gas cell for the quantification. The method developed provided high sensitivity and selectivity in ammonia detection both in pure standard solutions and in a simulated gastric juice matrix over the range of diagnostic concentrations tested. Preliminary analyses were also performed on real gastric juice samples from patients with gastric mucosal injury and with symptoms of H. pylori infection, and the results were in agreement with the clinicopathology information. The whole analysis, performed in less than 10 min, can be directly applied on the sample without extraction procedures and it ensures high specificity of detection because of the ammonia fingerprint absorption bands in the infrared spectrum. This method could be easily used with endoscopy instrumentation to provide information in real time and would enable the endoscopist to improve and integrate gastroscopic examinations.

  14. Methods of use for sensor based fluid detection devices

    NASA Technical Reports Server (NTRS)

    Lewis, Nathan S. (Inventor)

    2001-01-01

    Methods of use and devices for detecting analyte in fluid. A system for detecting an analyte in a fluid is described comprising a substrate having a sensor comprising a first organic material and a second organic material where the sensor has a response to permeation by an analyte. A detector is operatively associated with the sensor. Further, a fluid delivery appliance is operatively associated with the sensor. The sensor device has information storage and processing equipment, which is operably connected with the device. This device compares a response from the detector with a stored ideal response to detect the presence of analyte. An integrated system for detecting an analyte in a fluid is also described where the sensing device, detector, information storage and processing device, and fluid delivery device are incorporated in a substrate. Methods for use for the above system are also described where the first organic material and a second organic material are sensed and the analyte is detected with a detector operatively associated with the sensor. The method provides for a device, which delivers fluid to the sensor and measures the response of the sensor with the detector. Further, the response is compared to a stored ideal response for the analyte to determine the presence of the analyte. In different embodiments, the fluid measured may be a gaseous fluid, a liquid, or a fluid extracted from a solid. Methods of fluid delivery for each embodiment are accordingly provided.

  15. Spectral anomaly methods for aerial detection using KUT nuisance rejection

    NASA Astrophysics Data System (ADS)

    Detwiler, R. S.; Pfund, D. M.; Myjak, M. J.; Kulisek, J. A.; Seifert, C. E.

    2015-06-01

    This work discusses the application and optimization of a spectral anomaly method for the real-time detection of gamma radiation sources from an aerial helicopter platform. Aerial detection presents several key challenges over ground-based detection. For one, larger and more rapid background fluctuations are typical due to higher speeds, larger field of view, and geographically induced background changes. As well, the possible large altitude or stand-off distance variations cause significant steps in background count rate as well as spectral changes due to increased gamma-ray scatter with detection at higher altitudes. The work here details the adaptation and optimization of the PNNL-developed algorithm Nuisance-Rejecting Spectral Comparison Ratios for Anomaly Detection (NSCRAD), a spectral anomaly method previously developed for ground-based applications, for an aerial platform. The algorithm has been optimized for two multi-detector systems; a NaI(Tl)-detector-based system and a CsI detector array. The optimization here details the adaptation of the spectral windows for a particular set of target sources to aerial detection and the tailoring for the specific detectors. As well, the methodology and results for background rejection methods optimized for the aerial gamma-ray detection using Potassium, Uranium and Thorium (KUT) nuisance rejection are shown. Results indicate that use of a realistic KUT nuisance rejection may eliminate metric rises due to background magnitude and spectral steps encountered in aerial detection due to altitude changes and geographically induced steps such as at land-water interfaces.

  16. Consistency-based ellipse detection method for complicated images

    NASA Astrophysics Data System (ADS)

    Zhang, Lijun; Huang, Xuexiang; Feng, Weichun; Liang, Shuli; Hu, Tianjian

    2016-05-01

    Accurate ellipse detection in complicated images is a challenging problem due to corruptions from image clutter, noise, or occlusion of other objects. To cope with this problem, an edge-following-based ellipse detection method is proposed which promotes the performances of the subprocesses based on consistency. The ellipse detector models edge connectivity by line segments and exploits inconsistent endpoints of the line segments to split the edge contours into smooth arcs. The smooth arcs are further refined with a novel arc refinement method which iteratively improves the consistency degree of the smooth arc. A two-phase arc integration method is developed to group disconnected elliptical arcs belonging to the same ellipse, and two constraints based on consistency are defined to increase the effectiveness and speed of the merging process. Finally, an efficient ellipse validation method is proposed to evaluate the saliency of the elliptic hypotheses. Detailed evaluation on synthetic images shows that our method outperforms other state-of-the-art ellipse detection methods in terms of effectiveness and speed. Additionally, we test our detector on three challenging real-world datasets. The F-measure score and execution time of results demonstrate that our method is effective and fast in complicated images. Therefore, the proposed method is suitable for practical applications.

  17. Preface to the Focus Issue: Chaos Detection Methods and Predictability

    SciTech Connect

    Gottwald, Georg A.; Skokos, Charalampos

    2014-06-01

    This Focus Issue presents a collection of papers originating from the workshop Methods of Chaos Detection and Predictability: Theory and Applications held at the Max Planck Institute for the Physics of Complex Systems in Dresden, June 17–21, 2013. The main aim of this interdisciplinary workshop was to review comprehensively the theory and numerical implementation of the existing methods of chaos detection and predictability, as well as to report recent applications of these techniques to different scientific fields. The collection of twelve papers in this Focus Issue represents the wide range of applications, spanning mathematics, physics, astronomy, particle accelerator physics, meteorology and medical research. This Preface surveys the papers of this Issue.

  18. Proposal of Multiple Detection Method in Human Detection System using Terrestrial Digital TV Waves

    NASA Astrophysics Data System (ADS)

    Nishi, Masahiro; Shin, Koichi; Yoshida, Teruaki

    This paper newly proposes Multiple Detection (MD) method in the human detection system using terrestrial digital TV broadcasting waves. In the conventional human detection system using analog TV waves, human motion in a room can be detected by monitoring Received Signal Strength Indicator (RSSI) of the TV waves. The human detection system using TV waves works in the environments where there are no disturbances such as moving car and passing human outside the room. However, the digitalization of the terrestrial TV system deteriorates the detection performance of this system even in such environments. The radio propagation properties of the digital TV system are different from those of the analog one since the digital system is operated in the Single Frequency Network (SFN). In the SFN environment, there are some rooms under the condition that the received TV waves come from several broadcasting stations with same frequency. In such case, our measurement results indicate that the RSSI hardly fluctuates even under condition of human presence and the detection method only using RSSI has a possibility of overlooking the human motion. In the proposed MD method, not only RSSI but also Carrier to Noise Ratio (CNR) and Bit Error Rate (BER) are utilized for human detection. Today most digital TV tuners are capable of monitoring the quality of received signal, such as CNR and BER in addition to RSSI. In this paper, based on the practical measurements by using the digital TV tuners, we evaluate the fluctuation performances of RSSI, CNR and BER affected by human motion in a wooden detached house, and clarify that the MD method can effectively detect human motion even in the SFN environment.

  19. The advance of non-invasive detection methods in osteoarthritis

    NASA Astrophysics Data System (ADS)

    Dai, Jiao; Chen, Yanping

    2011-06-01

    Osteoarthritis (OA) is one of the most prevalent chronic diseases which badly affected the patients' living quality and economy. Detection and evaluation technology can provide basic information for early treatment. A variety of imaging methods in OA were reviewed, such as conventional X-ray, computed tomography (CT), ultrasound (US), magnetic resonance imaging (MRI) and near-infrared spectroscopy (NIRS). Among the existing imaging modalities, the spatial resolution of X-ray is extremely high; CT is a three-dimensional method, which has high density resolution; US as an evaluation method of knee OA discriminates lesions sensitively between normal cartilage and degenerative one; as a sensitive and nonionizing method, MRI is suitable for the detection of early OA, but the cost is too expensive for routine use; NIRS is a safe, low cost modality, and is also good at detecting early stage OA. In a word, each method has its own advantages, but NIRS is provided with broader application prospect, and it is likely to be used in clinical daily routine and become the golden standard for diagnostic detection.

  20. Foodproof Salmonella Detection Kit. Performance Tested Method 120301.

    PubMed

    Lindhardt, Charlotte; Schönenbrücher, Holger; Slaghuis, Jörg; Bubert, Andreas; Ossmer, Rolf; Junge, Benjamin; Berghof-Jäger, Kornelia

    2009-01-01

    The foodproof Salmonella Detection Kit was previously validated in the Performance Tested Methods program for the detection of Salmonella species in a variety of foods, including milk powder, egg powder, coconut, cocoa powder, chicken breast, minced meat, sliced sausage, sausage, smoked fish, pasta, white pepper, cumin, dough, wet pet food, dry pet food, ice cream, watermelon, sliced cabbage, food dye, and milk chocolate. The method was shown to be equivalent to the U.S. Food and Drug Administration's Bacteriological Analytical Manual (FDA-BAM) and the U.S. Department of Agriculture, Food Safety and Inspection Service's Microbiology Laboratory Guidebook reference culture procedures. In the first Emergency Response Validation (ERV) extension study, peanut butter was inoculated with S. enterica. ser Typhimurium. For the low inoculation level (1.08 CFU/25 g), a Chi-square value of 2.25 indicated that there was no significant performance difference between the foodproof Salmonella Detection Kit and the FDA-BAM reference method. For high-level inoculation (11.5 CFU/25 g) and uninoculated control, there was 100% agreement between the methods. In the second ERV extension study, peanut butter was inoculated with S. enterica. ser Typhimurium. For both inoculation levels (0.1 and 0.5 CFU/25 g by most probable number), Chi-square values of 0 indicated that there was no significant performance difference between foodproof Salmonella Detection Kit and the FDA-BAM reference method. PMID:20166611

  1. A New Intrusion Detection Method Based on Antibody Concentration

    NASA Astrophysics Data System (ADS)

    Zeng, Jie; Li, Tao; Li, Guiyang; Li, Haibo

    Antibody is one kind of protein that fights against the harmful antigen in human immune system. In modern medical examination, the health status of a human body can be diagnosed by detecting the intrusion intensity of a specific antigen and the concentration indicator of corresponding antibody from human body’s serum. In this paper, inspired by the principle of antigen-antibody reactions, we present a New Intrusion Detection Method Based on Antibody Concentration (NIDMBAC) to reduce false alarm rate without affecting detection rate. In our proposed method, the basic definitions of self, nonself, antigen and detector in the intrusion detection domain are given. Then, according to the antigen intrusion intensity, the change of antibody number is recorded from the process of clone proliferation for detectors based on the antigen classified recognition. Finally, building upon the above works, a probabilistic calculation method for the intrusion alarm production, which is based on the correlation between the antigen intrusion intensity and the antibody concen-tration, is proposed. Our theoretical analysis and experimental results show that our proposed method has a better performance than traditional methods.

  2. Variable threshold method for ECG R-peak detection.

    PubMed

    Kew, Hsein-Ping; Jeong, Do-Un

    2011-10-01

    In this paper, a wearable belt-type ECG electrode worn around the chest by measuring the real-time ECG is produced in order to minimize the inconvenient in wearing. ECG signal is detected using a potential instrument system. The measured ECG signal is transmits via an ultra low power consumption wireless data communications unit to personal computer using Zigbee-compatible wireless sensor node. ECG signals carry a lot of clinical information for a cardiologist especially the R-peak detection in ECG. R-peak detection generally uses the threshold value which is fixed. There will be errors in peak detection when the baseline changes due to motion artifacts and signal size changes. Preprocessing process which includes differentiation process and Hilbert transform is used as signal preprocessing algorithm. Thereafter, variable threshold method is used to detect the R-peak which is more accurate and efficient than fixed threshold value method. R-peak detection using MIT-BIH databases and Long Term Real-Time ECG is performed in this research in order to evaluate the performance analysis.

  3. Recent developments in optical detection methods for microchip separations.

    PubMed

    Götz, Sebastian; Karst, Uwe

    2007-01-01

    This paper summarizes the features and performances of optical detection systems currently applied in order to monitor separations on microchip devices. Fluorescence detection, which delivers very high sensitivity and selectivity, is still the most widely applied method of detection. Instruments utilizing laser-induced fluorescence (LIF) and lamp-based fluorescence along with recent applications of light-emitting diodes (LED) as excitation sources are also covered in this paper. Since chemiluminescence detection can be achieved using extremely simple devices which no longer require light sources and optical components for focusing and collimation, interesting approaches based on this technique are presented, too. Although UV/vis absorbance is a detection method that is commonly used in standard desktop electrophoresis and liquid chromatography instruments, it has not yet reached the same level of popularity for microchip applications. Current applications of UV/vis absorbance detection to microchip separations and innovative approaches that increase sensitivity are described. This article, which contains 85 references, focuses on developments and applications published within the last three years, points out exciting new approaches, and provides future perspectives on this field. PMID:17031620

  4. A new ultrasonic signal amplification method for detection of bacteria

    NASA Astrophysics Data System (ADS)

    Kant Shukla, Shiva; Resa López, Pablo; Sierra Sánchez, Carlos; Urréjola, José; Segura, Luis Elvira

    2012-10-01

    A new method is presented that increases the sensitivity of ultrasound-based techniques for detection of bacteria. The technique was developed for the detection of catalase-positive microorganisms. It uses a bubble trapping medium containing hydrogen peroxide that is mixed with the sample for microbiological evaluation. The enzyme catalase is present in catalase-positive bacteria, which induces a rapid hydrolysis of hydrogen peroxide, forming bubbles which remain in the medium. This reaction results in the amplification of the mechanical changes that the microorganisms produce in the medium. The effect can be detected by means of ultrasonic wave amplitude continuous measurement since the bubbles increase the ultrasonic attenuation significantly. It is shown that microorganism concentrations of the order of 105 cells ml-1 can be detected using this method. This allows an improvement of three orders of magnitude in the ultrasonic detection threshold of microorganisms in conventional culture media, and is competitive with modern rapid microbiological methods. It can also be used for the characterization of the enzymatic activity.

  5. A Method of Detecting Fire Smoke by Using Optical Flow

    NASA Astrophysics Data System (ADS)

    Terada, Kenji; Miyahara, Hiroyuki; Nii, Yasutoshi

    In this paper, the authors propose a method for detecting fire smoke by using the optical flow. This method is not influenced against the image obtainment environment. About 60,000 fires have occurred every year in Japan. To be most important to the fires is an early period fire fighting. At present, the automatic devices of detectiong fires is needed. The alarms which can detect smoke and heat are utilized to house fires. However, these alarms are not useful for the outside of house such as the incendiary or woodland fire. This method is able to detect such a flame that becomes a fire is the early period. First, the region of the flame in the images obtained from the observation camera is detected. Next, the characteristic quantity that expresses the smoke is extracted. This characteristic is not influenced to the motion such as the cloud, leaf and moving objects. In other words, the only smoke can be detected, from the range which looks like the flame in the image.

  6. Method and apparatus for detecting laminar flow separation and reattachment

    NASA Technical Reports Server (NTRS)

    Stack, John P. (Inventor); Mangalam, Sivaramakrishnan M. (Inventor)

    1989-01-01

    The invention is a method and apparatus for detecting laminar flow separation and flow reattachment of a fluid stream by simultaneously sensing and comparing a plurality of output signals, each representing the dynamic shear stress at one of an equal number of sensors spaced along a straight line on the surface of an airfoil or the like that extends parallel to the fluid stream. The output signals are concurrently compared to detect the sensors across which a reversal in phase of said output signal occurs, said detected sensors being in the region of laminar separation or reattachment. The novelty in this invention is the discovery and use of the phase reversal phenomena to detect laminar separation and attachment of a fluid stream from any surface such as an airfoil supported therein.

  7. Method and apparatus for detection of chemical vapors

    DOEpatents

    Mahurin, Shannon Mark; Dai, Sheng; Caja, Josip

    2007-05-15

    The present invention is a gas detector and method for using the gas detector for detecting and identifying volatile organic and/or volatile inorganic substances present in unknown vapors in an environment. The gas detector comprises a sensing means and a detecting means for detecting electrical capacitance variance of the sensing means and for further identifying the volatile organic and volatile inorganic substances. The sensing means comprises at least one sensing unit and a sensing material allocated therein the sensing unit. The sensing material is an ionic liquid which is exposed to the environment and is capable of dissolving a quantity of said volatile substance upon exposure thereto. The sensing means constitutes an electrochemical capacitor and the detecting means is in electrical communication with the sensing means.

  8. Emergency First Responders' Experience with Colorimetric Detection Methods

    SciTech Connect

    Sandra L. Fox; Keith A. Daum; Carla J. Miller; Marnie M. Cortez

    2007-10-01

    Nationwide, first responders from state and federal support teams respond to hazardous materials incidents, industrial chemical spills, and potential weapons of mass destruction (WMD) attacks. Although first responders have sophisticated chemical, biological, radiological, and explosive detectors available for assessment of the incident scene, simple colorimetric detectors have a role in response actions. The large number of colorimetric chemical detection methods available on the market can make the selection of the proper methods difficult. Although each detector has unique aspects to provide qualitative or quantitative data about the unknown chemicals present, not all detectors provide consistent, accurate, and reliable results. Included here, in a consumer-report-style format, we provide “boots on the ground” information directly from first responders about how well colorimetric chemical detection methods meet their needs in the field and how they procure these methods.

  9. An automatic registration method based on runway detection

    NASA Astrophysics Data System (ADS)

    Zhang, Xiuqiong; Yu, Li; Huang, Guo

    2014-04-01

    Runway is seen distinctly that is a crucial condition in the process of approaching and landing. One of the enhanced vision methods is image fusion method between the infrared and visible images in EVS (Enhanced Vision System). The image registration plays a very important role in image fusion. So, an automatic image registration method is proposed based on the accurate runway detection. Firstly, runway is detected using DWT (discrete wavelets transform) from the infrared and visible images respectively. Then, a fitting triangle is constructed according to the edges of runway. The corresponding feature points extracted from the middle points of edges and the centroid of triangle are used to compute the transform parameters. The results of registration are more accurate and efficient than those of registration based on mutual information. This method is robust and has less computation which can be applied to real-time system.

  10. A hybrid approach for efficient anomaly detection using metaheuristic methods

    PubMed Central

    Ghanem, Tamer F.; Elkilani, Wail S.; Abdul-kader, Hatem M.

    2014-01-01

    Network intrusion detection based on anomaly detection techniques has a significant role in protecting networks and systems against harmful activities. Different metaheuristic techniques have been used for anomaly detector generation. Yet, reported literature has not studied the use of the multi-start metaheuristic method for detector generation. This paper proposes a hybrid approach for anomaly detection in large scale datasets using detectors generated based on multi-start metaheuristic method and genetic algorithms. The proposed approach has taken some inspiration of negative selection-based detector generation. The evaluation of this approach is performed using NSL-KDD dataset which is a modified version of the widely used KDD CUP 99 dataset. The results show its effectiveness in generating a suitable number of detectors with an accuracy of 96.1% compared to other competitors of machine learning algorithms. PMID:26199752

  11. Apparatus and method for detecting leaks in piping

    DOEpatents

    Trapp, D.J.

    1994-12-27

    A method and device are disclosed for detecting the location of leaks along a wall or piping system, preferably in double-walled piping. The apparatus comprises a sniffer probe, a rigid cord such as a length of tube attached to the probe on one end and extending out of the piping with the other end, a source of pressurized air and a source of helium. The method comprises guiding the sniffer probe into the inner pipe to its distal end, purging the inner pipe with pressurized air, filling the annulus defined between the inner and outer pipe with helium, and then detecting the presence of helium within the inner pipe with the probe as is pulled back through the inner pipe. The length of the tube at the point where a leak is detected determines the location of the leak in the pipe. 2 figures.

  12. Apparatus and method for detecting leaks in piping

    DOEpatents

    Trapp, Donald J.

    1994-01-01

    A method and device for detecting the location of leaks along a wall or piping system, preferably in double-walled piping. The apparatus comprises a sniffer probe, a rigid cord such as a length of tube attached to the probe on one end and extending out of the piping with the other end, a source of pressurized air and a source of helium. The method comprises guiding the sniffer probe into the inner pipe to its distal end, purging the inner pipe with pressurized air, filling the annulus defined between the inner and outer pipe with helium, and then detecting the presence of helium within the inner pipe with the probe as is pulled back through the inner pipe. The length of the tube at the point where a leak is detected determines the location of the leak in the pipe.

  13. Method for detecting an image of an object

    DOEpatents

    Chapman, Leroy Dean; Thomlinson, William C.; Zhong, Zhong

    1999-11-16

    A method for detecting an absorption, refraction and scatter image of an object by independently analyzing, detecting, digitizing, and combining images acquired on a high and a low angle side of a rocking curve of a crystal analyzer. An x-ray beam which is generated by any suitable conventional apparatus can be irradiated upon either a Bragg type crystal analyzer or a Laue type crystal analyzer. Images of the absorption, refraction and scattering effects are detected, such as on an image plate, and then digitized. The digitized images are simultaneously solved, preferably on a pixel-by-pixel basis, to derive a combined visual image which has dramatically improved contrast and spatial resolution over an image acquired through conventional radiology methods.

  14. A hybrid approach for efficient anomaly detection using metaheuristic methods.

    PubMed

    Ghanem, Tamer F; Elkilani, Wail S; Abdul-Kader, Hatem M

    2015-07-01

    Network intrusion detection based on anomaly detection techniques has a significant role in protecting networks and systems against harmful activities. Different metaheuristic techniques have been used for anomaly detector generation. Yet, reported literature has not studied the use of the multi-start metaheuristic method for detector generation. This paper proposes a hybrid approach for anomaly detection in large scale datasets using detectors generated based on multi-start metaheuristic method and genetic algorithms. The proposed approach has taken some inspiration of negative selection-based detector generation. The evaluation of this approach is performed using NSL-KDD dataset which is a modified version of the widely used KDD CUP 99 dataset. The results show its effectiveness in generating a suitable number of detectors with an accuracy of 96.1% compared to other competitors of machine learning algorithms. PMID:26199752

  15. Microbial detection method based on sensing molecular hydrogen

    NASA Technical Reports Server (NTRS)

    Wilkins, J. R.; Stoner, G. E.; Boykin, E. H.

    1974-01-01

    A simple method for detecting bacteria, based on the time of hydrogen evolution, was developed and tested against various members of the Enterobacteriaceae group. The test system consisted of (1) two electrodes, platinum and a reference electrode, (2) a buffer amplifier, and (3) a strip-chart recorder. Hydrogen evolution was measured by an increase in voltage in the negative (cathodic) direction. A linear relationship was established between inoculum size and the time hydrogen was detected (lag period). Lag times ranged from 1 h for 1 million cells/ml to 7 h for 1 cell/ml. For each 10-fold decrease in inoculum, length of the lag period increased 60 to 70 min. Based on the linear relationship between inoculum and lag period, these results indicate the potential application of the hydrogen-sensing method for rapidly detecting coliforms and other gas-producing microorganisms in a variety of clinical, food, and other samples.

  16. A novel electrochemical detection method for aptamer biosensors.

    PubMed

    Bang, Gyeong Sook; Cho, Suhyeong; Kim, Byung-Gee

    2005-12-15

    A beacon aptamer-based biosensor for the detection of thrombin was developed using electrochemical transduction method. Gold surface was modified with a beacon aptamer covalently linked at 5'-terminus with a linker containing a primary aliphatic amine. Methylene blue (MB) was intercalated into the beacon sequence, and used as an electrochemical marker. When the beacon aptamer immobilized on gold surface encounters thrombin, the hairpin forming beacon aptamer is conformationally changed to release the intercalated MB, resulting a decrease in electrical current intensity in voltamogram. The peak signal of the MB is clearly decreased by the binding of thrombin onto the beacon aptamer. The linear range of the signal was observed between 0 and 50.8 nM of thrombin with 0.999 correlation factor. This method was able to linearly and selectively detect thrombin with a detection limit of 11 nM.

  17. Methods for gas detection using stationary hyperspectral imaging sensors

    SciTech Connect

    Conger, James L.; Henderson, John R.

    2012-04-24

    According to one embodiment, a method comprises producing a first hyperspectral imaging (HSI) data cube of a location at a first time using data from a HSI sensor; producing a second HSI data cube of the same location at a second time using data from the HSI sensor; subtracting on a pixel-by-pixel basis the second HSI data cube from the first HSI data cube to produce a raw difference cube; calibrating the raw difference cube to produce a calibrated raw difference cube; selecting at least one desired spectral band based on a gas of interest; producing a detection image based on the at least one selected spectral band and the calibrated raw difference cube; examining the detection image to determine presence of the gas of interest; and outputting a result of the examination. Other methods, systems, and computer program products for detecting the presence of a gas are also described.

  18. Phase-resolved ferromagnetic resonance using heterodyne detection method

    PubMed Central

    Yoon, Seungha; Liu, Jason; McMichael, Robert D.

    2016-01-01

    This paper describes a phase-resolved ferromagnetic resonance (FMR) measurement using a heterodyne method. Spin precession is driven by microwave fields and detected by 1550 nm laser light that is modulated at a frequency slightly shifted with respected to the FMR driving frequency. The evolving phase difference between the spin precession and the modulated light produces a slowly oscillating Kerr rotation signal with a phase equal to the precession phase plus a phase due to the path length difference between the excitation microwave signal and the optical signal. We estimate the accuracy of the precession phase measurement to be 0.1 rad. This heterodyne FMR detection method eliminates the need for field modulation and allows a stronger detection signal at higher intermediate frequency where the 1/f noise floor is reduced. PMID:27453957

  19. Eddy Current System and Method for Crack Detection

    NASA Technical Reports Server (NTRS)

    Wincheski, Russell A. (Inventor); Simpson, John W. (Inventor)

    2012-01-01

    An eddy current system and method enables detection of sub-surface damage in a cylindrical object. The invention incorporates a dual frequency, orthogonally wound eddy current probe mounted on a stepper motor-controlled scanning system. The system is designed to inspect for outer surface damage from the interior of the cylindrical object.

  20. TESTING METHODS FOR DETECTION OF CRYPTOSPORIDIUM SPP. IN WATER SAMPLES

    EPA Science Inventory

    A large waterborne outbreak of cryptosporidiosis in Milwaukee, Wisconsin, U.S.A. in 1993 prompted a search for ways to prevent large-scale waterborne outbreaks of protozoan parasitoses. Methods for detecting Cryptosporidium parvum play an integral role in strategies that lead to...

  1. Reconsideration of the ANOVA Method of Detecting Item Bias.

    ERIC Educational Resources Information Center

    Seong, Tae-Je

    The validity of the analysis of variance (ANOVA) of a split plot factorial design was investigated using a complex interaction contrast with matched two-group ability data for detecting biased items. The definition of a biased item by this method is: an item is biased if there is an item-by-group interaction when there is no group difference in…

  2. Monoclonal antibodies and method for detecting dioxins and dibenzofurans

    DOEpatents

    Vanderlaan, Martin; Stanker, Larry H.; Watkins, Bruce E.; Bailey, Nina R.

    1989-01-01

    Compositions of matter are described which include five monoclonal antibodies that react with dioxins and dibenzofurans, and the five hybridomas that produce these monoclonal antibodies. In addition, a method for the use of these antibodies in a sensitive immunoassay for dioxins and dibenzofurans is given, which permits detection of these pollutants in samples at concentrations in the range of a few parts per billion.

  3. Improved method for detection of glycosidases in bacterial colonies.

    PubMed Central

    Paoni, N F; Arroyo, R L

    1984-01-01

    An assay has been developed to detect bacterial glycosidases in colonies grown on the surface of agar plates. Advantages of this technique over previously described methods include elimination of the need for replica plating, better visualization of chromagenic reaction products, and a simple permeabilization step to enable better penetration by chromagenic substrates. Images PMID:6364970

  4. A METHOD TO DETECT VIABLE HELICOBACTER PYLORI BACTERIA IN GROUNDWATER

    EPA Science Inventory

    The inability to detect the presence of viable Helicobacter pylori bacteria in environmental waters has hindered the public health community in assessing the role water may playin the transmission of this pathogen. This work describes a cultural enrichment method coupled with an...

  5. Method for immunodiagnostic detection of dioxins at low concentrations

    DOEpatents

    Vanderlaan, Martin; Stanker, Larry H.; Watkins, Bruce E.; Petrovic, Peter; Gorbach, Siegbert

    1995-01-01

    A method is described for the use of monoclonal antibodies in a sensitive immunoassay for halogenated dioxins and dibenzofurans in industrial samples which contain impurities. Appropriate sample preparation and selective enzyme amplification of the immunoassay sensitivity permits detection of dioxin contaminants in industrial or environmental samples at concentrations in the range of a few parts per trillion.

  6. DETECTION OF FECAL ENTEROCOCCI USING A REAL TIME PCR METHOD

    EPA Science Inventory

    In spite of their importance in public health, the detection of fecal enterococci is performed via culturing methods that are time consuming and that are subject to inaccuracies that relate to their culturable status. In order to address these problems, a real time PCR (TaqMan) ...

  7. PCR-Free Enrichment of Mitochondrial DNA from Human Blood and Cell Lines for High Quality Next-Generation DNA Sequencing

    PubMed Central

    Gould, Meetha P.; Bosworth, Colleen M.; McMahon, Sarah; Grandhi, Sneha; Grimerg, Brian T.; LaFramboise, Thomas

    2015-01-01

    Recent advances in sequencing technology allow for accurate detection of mitochondrial sequence variants, even those in low abundance at heteroplasmic sites. Considerable sequencing cost savings can be achieved by enriching samples for mitochondrial (relative to nuclear) DNA. Reduction in nuclear DNA (nDNA) content can also help to avoid false positive variants resulting from nuclear mitochondrial sequences (numts). We isolate intact mitochondrial organelles from both human cell lines and blood components using two separate methods: a magnetic bead binding protocol and differential centrifugation. DNA is extracted and further enriched for mitochondrial DNA (mtDNA) by an enzyme digest. Only 1 ng of the purified DNA is necessary for library preparation and next generation sequence (NGS) analysis. Enrichment methods are assessed and compared using mtDNA (versus nDNA) content as a metric, measured by using real-time quantitative PCR and NGS read analysis. Among the various strategies examined, the optimal is differential centrifugation isolation followed by exonuclease digest. This strategy yields >35% mtDNA reads in blood and cell lines, which corresponds to hundreds-fold enrichment over baseline. The strategy also avoids false variant calls that, as we show, can be induced by the long-range PCR approaches that are the current standard in enrichment procedures. This optimization procedure allows mtDNA enrichment for efficient and accurate massively parallel sequencing, enabling NGS from samples with small amounts of starting material. This will decrease costs by increasing the number of samples that may be multiplexed, ultimately facilitating efforts to better understand mitochondria-related diseases. PMID:26488301

  8. Comparison of methods to detect Pasteurella multocida in carrier waterfowl

    USGS Publications Warehouse

    Samuel, M.D.; Shadduck, D.J.; Goldberg, D.R.; Johnson, W.P.

    2003-01-01

    We conducted laboratory challenge trials using mallard ducks (Anas platyrhynchos) to compare methods for detecting carriers of Pasteurella multocida, the bacterium that causes avian cholera, in wild birds. Birds that survived the initial infection were euthanized at 2-4 wk intervals up to 14 wk post challenge. Isolates of P. multocida were obtained at necropsy from 23% of the birds that survived initial infection. We found that swab samples (oral, cloacal, nasal, eye, and leg joint) were most effective for detecting carrier birds up to 14 wk post infection. No detectable differences in isolation were observed for samples stored in either 10% dimethysulfoxide or brain heart infusion broth. The frequency of detecting carriers in our challenge trials appeared to be related to mortality rates observed during the trial, but was not related to a number of other factors including time after challenge, time delays in collecting tissues postmortem, and route of infection. In our trials, there was little association between antibody levels and carrier status. We concluded that swabs samples collected from recently dead birds, stored in liquid nitrogen, and processed using selective broth provide a feasible field method for detecting P. multocida carriers in wild waterfowl.

  9. Device and method for detecting sulfur dioxide at high temperatures

    DOEpatents

    West, David L.; Montgomery, Frederick C.; Armstrong, Timothy R.

    2011-11-01

    The present invention relates to a method for selectively detecting and/or measuring gaseous SO.sub.2 at a temperature of at least 500.degree. C., the method involving: (i) providing a SO.sub.2-detecting device including an oxygen ion-conducting substrate having on its surface at least three electrodes comprising a first, second, and third electrode; (ii) driving a starting current of specified magnitude and temporal variation between the first and second electrodes; (iii) contacting the SO.sub.2-detecting device with the SO.sub.2-containing sample while maintaining the magnitude and any temporal variation of the starting current, wherein said SO.sub.2-containing sample causes a change in the electrical conductance of said device; and (iv) detecting the change in electrical conductance of the device based on measuring an electrical property related to or indicative of the conductance of the device between the first and third electrodes, or between the second and third electrodes, and detecting SO.sub.2 in the SO.sub.2-containing sample based on the measured change in electrical conductance.

  10. An effective method for incoherent scattering radar's detecting ability evaluation

    NASA Astrophysics Data System (ADS)

    Lu, Ziqing; Yao, Ming; Deng, Xiaohua

    2016-06-01

    Ionospheric incoherent scatter radar (ISR), which is used to detect ionospheric electrons and ions, generally, has megawatt class transmission power and hundred meter level antenna aperture. The crucial purpose of this detecting technology is to get ionospheric parameters by acquiring the autocorrelation function and power spectrum of the target ionospheric plasma echoes. Whereas the ISR's echoes are very weak because of the small radar cross section of its target, estimating detecting ability will be significantly instructive and meaningful for ISR system design. In this paper, we evaluate the detecting ability through signal-to-noise ratio (SNR). The soft-target radar equation is deduced to be applicable to ISR, through which we use data from International Reference Ionosphere model to simulate signal-to-noise ratio (SNR) of echoes, and then comparing the measured SNR from European Incoherent Scatter Scientific Association and Advanced Modular Incoherent Scatter Radar with the simulation. The simulation results show good consistency with the measured SNR. For ISR, the topic of this paper is the first comparison between the calculated SNR and radar measurements; the detecting ability can be improved through increasing SNR. The effective method for ISR's detecting ability evaluation provides basis for design of radar system.

  11. Methods and systems to detect adverse drug reactions in hospitals.

    PubMed

    Thürmann, P A

    2001-01-01

    Detection of adverse drug reactions (ADRs) in hospitals offers the chance to detect serious ADRs resulting in hospitalisation and ADRs occurring in hospitalised patients, i.e. patients with high comorbidity and receiving drugs that are administered only in hospitals. The most commonly applied methods involve stimulated spontaneous reporting of doctors and nurses, comprehensive collection by trained specialists and, more recently, computer-assisted approaches using routine data from hospital information systems. The different methods of ADR detection used result in different rates and types of ADRs and, consequently, in different drug classes being responsible for these ADRs. Another factor influencing the results of surveys is the interpretation of the term ADR, where some authors adhere to the strict definition of the World Health Organization and many others include intended and unintended poisoning as well as errors in prescribing and dispensing, thus referring to adverse drug events. Depending on the method used for screening of patients, a high number of possible ADRs and only few definite ADRs are found, or vice versa. These variations have to be taken into account when comparing the results of further analyses performed with these data. ADR rates and incidences in relation to the number of drugs prescribed or patients exposed have been calculated in only a few surveys and projects, and this interesting pharmacoepidemiological approach deserves further study. In addition, the pharmacoeconomic impact of ADRs, either resulting in hospitalisation or prolonging hospital stay, has been estimated using different approaches. However, a common standardised procedure for such calculations has not yet been defined. Although detection of ADRs in hospitals offers the opportunity to detect severe ADRs of newly approved drugs, these ADRs are still discovered by spontaneous reporting systems. The prospects offered by electronic hospital information systems as well as

  12. Detection and isolation of circulating tumor cells: principles and methods.

    PubMed

    Esmaeilsabzali, Hadi; Beischlag, Timothy V; Cox, Michael E; Parameswaran, Ash M; Park, Edward J

    2013-11-15

    Efforts to improve the clinical management of several cancers include finding better methods for the quantitative and qualitative analysis of circulating tumor cells (CTCs). However, detection and isolation of CTCs from the blood circulation is not a trivial task given their scarcity and the lack of reliable markers to identify these cells. With a variety of emerging technologies, a thorough review of the exploited principles and techniques as well as the trends observed in the development of these technologies can assist researchers to recognize the potential improvements and alternative approaches. To help better understand the related biological concepts, a simplified framework explaining cancer formation and its spread to other organs as well as how CTCs contribute to this process has been presented first. Then, based on their basic working-principles, the existing methods for detection and isolation of CTCs have been classified and reviewed as nucleic acid-based, physical properties-based and antibody-based methods. The review of literature suggests that antibody-based methods, particularly in conjunction with a microfluidic lab-on-a-chip setting, offer the highest overall performance for detection and isolation of CTCs. Further biological and engineering-related research is required to improve the existing methods. These include finding more specific markers for CTCs as well as enhancing the throughput, sensitivity, and analytic functionality of current devices.

  13. Fault detection in electromagnetic suspension systems with state estimation methods

    SciTech Connect

    Sinha, P.K.; Zhou, F.B.; Kutiyal, R.S. . Dept. of Engineering)

    1993-11-01

    High-speed maglev vehicles need a high level of safety that depends on the whole vehicle system's reliability. There are many ways of attaining high reliability for the system. Conventional method uses redundant hardware with majority vote logic circuits. Hardware redundancy costs more, weigh more and occupy more space than that of analytically redundant methods. Analytically redundant systems use parameter identification and state estimation methods based on the system models to detect and isolate the fault of instruments (sensors), actuator and components. In this paper the authors use the Luenberger observer to estimate three state variables of the electromagnetic suspension system: position (airgap), vehicle velocity, and vertical acceleration. These estimates are compared with the corresponding sensor outputs for fault detection. In this paper, they consider FDI of the accelerometer, the sensor which provides the ride quality.

  14. Immunochemical Methods for Ochratoxin A Detection: A Review

    PubMed Central

    Meulenberg, Eline P.

    2012-01-01

    The safety of food and feed depends to a great deal on quality control. Numerous compounds and organisms may contaminate food and feed commodities and thus pose a health risk for consumers. The compound of interest in this review is ochratoxin A (OTA), a secondary metabolite of the fungi Aspergillus and Penicillium. Due to its adverse health effects, detection and quantification are of utmost importance. Quality control of food and feed requires extraction and analysis, including TLC, HPLC, MS, and immunochemical methods. Each of these methods has its advantages and disadvantages. However, with regard to costs and rapidity, immunochemical methods have gained much interest in the last decade. In this review an introduction to immunochemistry and assay design will be given to elucidate the principles. Further, the application of the various formats to the detection and quantification of ochratoxin will be described, including the use of commercially available kits. PMID:22606375

  15. A method for the detection of bacteriophages from ocean water

    NASA Astrophysics Data System (ADS)

    Moebus, K.

    1980-03-01

    A method for the isolation of bacteriophages from ocean water is described. It precludes sample storage before starting phage-enrichment cultures and provides for the use of 3 sub-samples enriched with organic nutrients after 1, 2 and 3 days of incubation. The method was used with samples collected from 6 m below the surface at 48 stations between the European continental shelf and the Sargasso Sea. With 213 among 931 bacterial isolates about 250 strains of bacteriophages were detected by two methods of different sensitivity. From 14 samples taken east of the Azores 115 host bacteria have been found versus only 98 from 34 samples collected at westerly stations. The employment of more than one sub-sample per station as well as the use of more sensitive phage-detection procedures was found to be more advantageous the lower the concentration of cultivatable bacteria in a sample.

  16. Optimal method for exoplanet detection by angular differential imaging.

    PubMed

    Mugnier, Laurent M; Cornia, Alberto; Sauvage, Jean-François; Rousset, Gérard; Fusco, Thierry; Védrenne, Nicolas

    2009-06-01

    We propose a novel method for the efficient direct detection of exoplanets from the ground using angular differential imaging. The method combines images appropriately, then uses the combined images jointly in a maximum-likelihood framework to estimate the position and intensity of potential planets orbiting the observed star. It takes into account the mixture of photon and detector noises and a positivity constraint on the planet's intensity. A reasonable detection criterion is also proposed based on the computation of the noise propagation from the images to the estimated intensity of the potential planet. The implementation of this method is tested on simulated data that take into account static aberrations before and after the coronagraph, residual turbulence after adaptive optics correction, and noise.

  17. Optimal method for exoplanet detection by angular differential imaging.

    PubMed

    Mugnier, Laurent M; Cornia, Alberto; Sauvage, Jean-François; Rousset, Gérard; Fusco, Thierry; Védrenne, Nicolas

    2009-06-01

    We propose a novel method for the efficient direct detection of exoplanets from the ground using angular differential imaging. The method combines images appropriately, then uses the combined images jointly in a maximum-likelihood framework to estimate the position and intensity of potential planets orbiting the observed star. It takes into account the mixture of photon and detector noises and a positivity constraint on the planet's intensity. A reasonable detection criterion is also proposed based on the computation of the noise propagation from the images to the estimated intensity of the potential planet. The implementation of this method is tested on simulated data that take into account static aberrations before and after the coronagraph, residual turbulence after adaptive optics correction, and noise. PMID:19488172

  18. Molecular Diagnostic Methods for Detection and Characterization of Human Noroviruses

    PubMed Central

    Chen, Haifeng; Hu, Yuan

    2016-01-01

    Human noroviruses are a group of viral agents that afflict people of all age groups. The viruses are now recognized as the most common causative agent of nonbacterial acute gastroenteritis and foodborne viral illness worldwide. However, they have been considered to play insignificant roles in the disease burden of acute gastroenteritis for the past decades until the recent advent of new and more sensitive molecular diagnostic methods. The availability and application of the molecular diagnostic methods have led to enhanced detection of noroviruses in clinical, food and environmental samples, significantly increasing the recognition of noroviruses as an etiologic agent of epidemic and sporadic acute gastroenteritis. This article aims to summarize recent efforts made for the development of molecular methods for the detection and characterization of human noroviruses. PMID:27335620

  19. FACS technology used in a new rapid bacterial detection method.

    PubMed

    Schmidt, M; Hourfar, M K; Nicol, S-B; Spengler, H-P; Montag, T; Seifried, Erhard

    2006-10-01

    Culture methods for bacterial detection (BacT/ALERT or Pall eBDS) are currently implemented in blood donor screening procedures in many countries. Experience in the first years after implementation of these detection assays showed that although the analytical sensitivity was extremely high (about 1 CFU mL(-1)), the majority of these platelets were still transfused before a positive screening result was attained. Rapid technologies were developed to more effectively prevent transfusion-transmitted bacterial infection. In this study, a new rapid bacterial detection method based on fluorescence-activated cell sorting (FACS) technology was developed. Bacteria were stained with thiazole orange dye for 5 min and measurement was taken immediately after staining. The entire process took only 30 min. Six transfusion-relevant bacteria strains were tested in a spiking study. Without pre-incubation in a special bacteria growth medium, analytical sensitivity ranged between 10(5) CFU mL(-1) (Klebsiella oxytoca and Serratia marcesens) and 10(3) CFU mL(-1) (Escherichia coli). Sensitivity could be improved to 10(1) CFU mL(-1) for all tested bacteria by adding a pre-incubation step (6 h at 37 degrees C). Although preliminary in nature, results of our study suggest that bacterial detection by FACS technology in conjunction with a pre-incubation step offers a sensitive alternative technology to culture methods. Additionally, it provides the benefit of a rapid test time and the opportunity of preventing bacterial transmitted infections more effectively.

  20. Methods for Detecting the Environmental Coccoid Form of Helicobacter pylori

    PubMed Central

    Mazaheri Assadi, Mahnaz; Chamanrokh, Parastoo; Whitehouse, Chris A.; Huq, Anwar

    2015-01-01

    Helicobacter pylori is recognized as the most common pathogen to cause gastritis, peptic and duodenal ulcers, and gastric cancer. The organisms are found in two forms: (1) spiral-shaped bacillus and (2) coccoid. H. pylori coccoid form, generally found in the environment, is the transformed form of the normal spiral-shaped bacillus after exposed to water or adverse environmental conditions such as exposure to sub-inhibitory concentrations of antimicrobial agents. The putative infectious capability and the viability of H. pylori under environmental conditions are controversial. This disagreement is partially due to the fact of lack in detecting the coccoid form of H. pylori in the environment. Accurate and effective detection methods of H. pylori will lead to rapid treatment and disinfection, and less human health damages and reduction in health care costs. In this review, we provide a brief introduction to H. pylori environmental coccoid forms, their transmission, and detection methods. We further discuss the use of these detection methods including their accuracy and efficiency. PMID:26075197

  1. Methods of detecting and controlling mucoid Pseudomonas biofilm production

    NASA Technical Reports Server (NTRS)

    Yu, Hongwei D. (Inventor); Qiu, Dongru (Inventor)

    2013-01-01

    Compositions and methods for detecting and controlling the conversion to mucoidy in Pseudomonas aeruginosa are disclosed. The present invention provides for detecting the switch from nonmucoid to mucoid state of P. aeruginosa by measuring mucE expression or MucE protein levels. The interaction between MucE and AlgW controls the switch to mucoidy in wild type P. aeruginosa. Also disclosed is an alginate biosynthesis heterologous expression system for use in screening candidate substances that inhibit conversion to mucoidy.

  2. Methods of detecting and controlling mucoid pseudomonas biofilm production

    NASA Technical Reports Server (NTRS)

    Yu, Hongwei D. (Inventor); Qiu, Dongru (Inventor)

    2010-01-01

    Compositions and methods for detecting and controlling the conversion to mucoidy in Pseudomonas aeruginosa are disclosed. The present invention provides for detecting the switch from nonmucoid to mucoid state of P. aeruginosa by measuring mucE expression or MucE protein levels. The interaction between MucE and AlgW controls the switch to mucoidy in wild type P. aeruginosa. Also disclosed is an alginate biosynthesis heterologous expression system for use in screening candidate substances that inhibit conversion to mucoidy.

  3. A new method of edge detection for object recognition

    USGS Publications Warehouse

    Maddox, Brian G.; Rhew, Benjamin

    2004-01-01

    Traditional edge detection systems function by returning every edge in an input image. This can result in a large amount of clutter and make certain vectorization algorithms less accurate. Accuracy problems can then have a large impact on automated object recognition systems that depend on edge information. A new method of directed edge detection can be used to limit the number of edges returned based on a particular feature. This results in a cleaner image that is easier for vectorization. Vectorized edges from this process could then feed an object recognition system where the edge data would also contain information as to what type of feature it bordered.

  4. Image change detection systems, methods, and articles of manufacture

    DOEpatents

    Jones, James L.; Lassahn, Gordon D.; Lancaster, Gregory D.

    2010-01-05

    Aspects of the invention relate to image change detection systems, methods, and articles of manufacture. According to one aspect, a method of identifying differences between a plurality of images is described. The method includes loading a source image and a target image into memory of a computer, constructing source and target edge images from the source and target images to enable processing of multiband images, displaying the source and target images on a display device of the computer, aligning the source and target edge images, switching displaying of the source image and the target image on the display device, to enable identification of differences between the source image and the target image.

  5. Earth analysis methods, subsurface feature detection methods, earth analysis devices, and articles of manufacture

    DOEpatents

    West, Phillip B.; Novascone, Stephen R.; Wright, Jerry P.

    2012-05-29

    Earth analysis methods, subsurface feature detection methods, earth analysis devices, and articles of manufacture are described. According to one embodiment, an earth analysis method includes engaging a device with the earth, analyzing the earth in a single substantially lineal direction using the device during the engaging, and providing information regarding a subsurface feature of the earth using the analysis.

  6. Earth analysis methods, subsurface feature detection methods, earth analysis devices, and articles of manufacture

    DOEpatents

    West, Phillip B.; Novascone, Stephen R.; Wright, Jerry P.

    2011-09-27

    Earth analysis methods, subsurface feature detection methods, earth analysis devices, and articles of manufacture are described. According to one embodiment, an earth analysis method includes engaging a device with the earth, analyzing the earth in a single substantially lineal direction using the device during the engaging, and providing information regarding a subsurface feature of the earth using the analysis.

  7. Method of detecting system function by measuring frequency response

    DOEpatents

    Morrison, John L.; Morrison, William H.

    2008-07-01

    Real time battery impedance spectrum is acquired using one time record, Compensated Synchronous Detection (CSD). This parallel method enables battery diagnostics. The excitation current to a test battery is a sum of equal amplitude sin waves of a few frequencies spread over range of interest. The time profile of this signal has duration that is a few periods of the lowest frequency. The voltage response of the battery, average deleted, is the impedance of the battery in the time domain. Since the excitation frequencies are known, synchronous detection processes the time record and each component, both magnitude and phase, is obtained. For compensation, the components, except the one of interest, are reassembled in the time domain. The resulting signal is subtracted from the original signal and the component of interest is synchronously detected. This process is repeated for each component.

  8. Heavy metals detection in sediments using PGNAA method.

    PubMed

    Da-Qian, Hei; Wen-Bao, Jia; Zhou, Jiang; Can, Cheng; Jia-Tong, Li; Hong-Tao, Wang

    2016-06-01

    A prompt gamma ray neutron activation analysis detection system was developed to detect the heavy metals in sediments by using an (241)Am-Be neutron source and BGO detector. The samples containing cadmium and mercury were used to test the performance of setup. The linear relationship between prompt gamma ray counts and the concentrations was studied. The results showed the counts of the prompt gamma rays from cadmium do not increase linearly with its concentrations, while the prompt gamma ray counts from Hg vary nearly linearly with the concentrations, due to the neutron self-shielding. Then a method was used to correct the effect and the non-linearly response was restored after the correction. And the minimum detectable concentration of Cd and Hg were 52.8 (at 8.484MeV) and 81.6 (at 5.967MeV) ppm, respectively. PMID:27015649

  9. Method of Detecting System Function by Measuring Frequency Response

    NASA Technical Reports Server (NTRS)

    Morrison, John L. (Inventor); Morrison, William H. (Inventor)

    2008-01-01

    Real time battery impedance spectrum is acquired using one time record, Compensated Synchronous Detection (CSD). This parallel method enables battery diagnostics. The excitation current to a test battery is a sum of equal amplitude sin waves of a few frequencies spread over range of interest. The time profile of this signal has duration that is a few periods of the lowest frequency. The voltage response of the battery, average deleted, is the impedance of the battery in the time domain. Since the excitation frequencies are known, synchronous detection processes the time record and each component, both magnitude and phase, is obtained. For compensation, the components, except the one of interest, are reassembled in the time domain. The resulting signal is subtracted from the original signal and the component of interest is synchronously detected. This process is repeated for each component.

  10. Method for detecting a mass density image of an object

    DOEpatents

    Wernick, Miles N.; Yang, Yongyi

    2008-12-23

    A method for detecting a mass density image of an object. An x-ray beam is transmitted through the object and a transmitted beam is emitted from the object. The transmitted beam is directed at an angle of incidence upon a crystal analyzer. A diffracted beam is emitted from the crystal analyzer onto a detector and digitized. A first image of the object is detected from the diffracted beam emitted from the crystal analyzer when positioned at a first angular position. A second image of the object is detected from the diffracted beam emitted from the crystal analyzer when positioned at a second angular position. A refraction image is obtained and a regularized mathematical inversion algorithm is applied to the refraction image to obtain a mass density image.

  11. Cytological detection of spermatozoa: comparison of three staining methods.

    PubMed

    Allery, J P; Telmon, N; Mieusset, R; Blanc, A; Rougé, D

    2001-03-01

    Sperm detection can be an important factor in confirming sexual assault in cases of rape. This paper compares three of the most commonly used staining methods cited in the scientific literature: Christmas tree. hematoxylin-eosin, and alkaline fuchsin. The population studied was composed of 174 consenting women seen at the Male Infertility Center in Toulouse. France. The date of their last sexual intercourse was accurately known. Alkaline fuchsin did not seem effective in detecting spermatozoa in vaginal samples. Compared with hematoxylin-eosin, Christmas tree stain appeared to be the most useful test in the first 72 h. Two external factors were associated with decreased detection of spermatozoa: time since in tercourse and sperm volume.

  12. Method for detecting free fiber ends in tissue paper

    NASA Astrophysics Data System (ADS)

    Raunio, Jukka-Pekka; Ritala, Risto

    2013-12-01

    Softness is one of the major properties of tissue paper. Tissue softness can be divided into bulk and surface softness. The bulk softness can be measured quite reliably by measuring the thickness and elasticity of a sheet. However, the measurement of surface softness is not straightforward. One significant factor influencing surface softness is the fibers extending from the surface of the tissue paper. This paper presents a novel imaging method to detect the amount of such fibers on the tissue paper. The method is based on the detection of shadows caused by the free fiber ends. The shadows cannot be detected as such from the reflectance image of the sheet because of the wavy surface of tissue paper. Thus, the 3D information of the surface was estimated based on the photometric stereo, and the intensity variations caused by the wavy surface were filtered out. The method has the advantages over previous methods of improved accuracy and the possibility of implementation in a running paper machine.

  13. The method for detecting diffusion ring diameter in Hemagglutinin measuring

    NASA Astrophysics Data System (ADS)

    Jing, Wenbo; Liu, Xue; Duan, Jin; Wang, Xiao-man

    2014-11-01

    The diffuser ring diameter measurement is the most critical in hemagglutinin Measuring. The traditional methods, such as a vernier caliper or high-definition scanned images are subjective and low for the measurement data reliability. Propose high-resolution diffusion ring image for drop-resolution processing, adaptive Canny operator and local detection method to extract complete and clear diffusion ring boundaries, and finally make use of polynomial interpolation algorithm to make diffusion ring outer boundary pixel coordinates achieve sub-pixel accuracy and the least-squares fitting circle algorithm to calculate the precise center of the circle and the diameter of the diffuser ring. Experimental results show that the method detection time is only 63.61ms, which is a faster speed; diffuser ring diameter estimation error can achieve 0.55 pixel, high stability in experimental data. This method is adapted to the various types of influenza vaccine hemagglutinin content measurements, and has important value in the influenza vaccine quality detection.

  14. Method of detecting genetically modified chicken containing human erythropoietin gene.

    PubMed

    Nakajima, Osamu; Nakamura, Kosuke; Kondo, Kazunari; Akiyama, Hiroshi; Teshima, Reiko

    2013-01-01

    Genetically modified (GM) chickens carrying the human erythropoietin (hEpo) gene have been developed to produce recombinant hEpo protein in eggs. However, such animals have not been approved as food sources in Japan. We developed a method for detecting the hEpo gene in chicken meat using a real-time polymerase chain reaction (real-time PCR). The hEpo gene was clearly detected in genomic DNA extracted from magnum and heart of a chimeric chicken containing the hEpo gene. A plasmid containing the hEpo gene was used as a standard reference molecule as well. The results clearly showed that our method was capable of detecting the hEpo gene contained in the plasmid in the presence of genomic DNA extracted from a raw chicken meat sample. We successfully used this method to test six samples of raw chicken meat and six samples of chicken meat in processed foods. This method will be useful for monitoring chicken meat that might have originated from GM chickens carrying the hEpo gene to assure food safety.

  15. Periodicity detection method for small-sample time series datasets.

    PubMed

    Tominaga, Daisuke

    2010-01-01

    Time series of gene expression often exhibit periodic behavior under the influence of multiple signal pathways, and are represented by a model that incorporates multiple harmonics and noise. Most of these data, which are observed using DNA microarrays, consist of few sampling points in time, but most periodicity detection methods require a relatively large number of sampling points. We have previously developed a detection algorithm based on the discrete Fourier transform and Akaike's information criterion. Here we demonstrate the performance of the algorithm for small-sample time series data through a comparison with conventional and newly proposed periodicity detection methods based on a statistical analysis of the power of harmonics.We show that this method has higher sensitivity for data consisting of multiple harmonics, and is more robust against noise than other methods. Although "combinatorial explosion" occurs for large datasets, the computational time is not a problem for small-sample datasets. The MATLAB/GNU Octave script of the algorithm is available on the author's web site: http://www.cbrc.jp/%7Etominaga/piccolo/. PMID:21151841

  16. An electromagnetic induction method for underground target detection and characterization

    SciTech Connect

    Bartel, L.C.; Cress, D.H.

    1997-01-01

    An improved capability for subsurface structure detection is needed to support military and nonproliferation requirements for inspection and for surveillance of activities of threatening nations. As part of the DOE/NN-20 program to apply geophysical methods to detect and characterize underground facilities, Sandia National Laboratories (SNL) initiated an electromagnetic induction (EMI) project to evaluate low frequency electromagnetic (EM) techniques for subsurface structure detection. Low frequency, in this case, extended from kilohertz to hundreds of kilohertz. An EMI survey procedure had already been developed for borehole imaging of coal seams and had successfully been applied in a surface mode to detect a drug smuggling tunnel. The SNL project has focused on building upon the success of that procedure and applying it to surface and low altitude airborne platforms. Part of SNL`s work has focused on improving that technology through improved hardware and data processing. The improved hardware development has been performed utilizing Laboratory Directed Research and Development (LDRD) funding. In addition, SNL`s effort focused on: (1) improvements in modeling of the basic geophysics of the illuminating electromagnetic field and its coupling to the underground target (partially funded using LDRD funds) and (2) development of techniques for phase-based and multi-frequency processing and spatial processing to support subsurface target detection and characterization. The products of this project are: (1) an evaluation of an improved EM gradiometer, (2) an improved gradiometer concept for possible future development, (3) an improved modeling capability, (4) demonstration of an EM wave migration method for target recognition, and a demonstration that the technology is capable of detecting targets to depths exceeding 25 meters.

  17. Comparison of three staining methods for detecting microsporidia in fluids.

    PubMed

    Didier, E S; Orenstein, J M; Aldras, A; Bertucci, D; Rogers, L B; Janney, F A

    1995-12-01

    Calcofluor white 2MR, modified trichrome blue, and indirect immunofluorescent antibody (IFA) staining methods were evaluated and compared for detecting microsporidia in stool. Serial 10-fold dilutions of Encephalitozoon (Septata) intestinalis were prepared in three formalinized stool specimens or in Tris-buffered saline. Ten-microliter aliquots were smeared onto glass slides, fixed with methanol, stained, and read by at least three individuals. The results indicated that the calcofluor stain was the most sensitive method, required approximately 15 min to perform, but did generate some false-positive results due to similarly staining small yeast cells. The modified trichrome blue stain was nearly as sensitive as the calcofluor stain and allowed for easier distinction between microsporidia and yeast cells. This stain, however, required approximately 60 min to perform. The IFA stain with polyclonal murine antiserum against E. intestinalis was the least sensitive of the methods and required approximately 130 min to perform. The lower limit of detection with the calcofluor and modified trichrome stains was a concentration of about 500 organisms in 10 microliters of stool to detect one microsporidian after viewing 50 fields at a final magnification of x1,000. Reliability was also addressed by use of 74 stool, urine, and intestinal fluid specimens, 50 of which were confirmed for the presence of microsporidia by transmission electron microscopy (TEM). All TEM-positive specimens were detected by calcofluor and modified trichrome blue staining. Ten specimens were not detected by the IFA stain. An additional seven TEM-negative specimens were read positive for microsporidia with the calcofluor stain, and of these, five also were read positive with the modified trichrome blue stain. The resulting diagnostic paradigm was to screen specimens with the calcofluor stain and to confirm the results with the modified trichrome stain. IFA, which was less sensitive, may become useful for

  18. Fast detection of air contaminants using immunobiological methods

    NASA Astrophysics Data System (ADS)

    Schmitt, Katrin; Bolwien, Carsten; Sulz, Gerd; Koch, Wolfgang; Dunkhorst, Wilhelm; Lödding, Hubert; Schwarz, Katharina; Holländer, Andreas; Klockenbring, Torsten; Barth, Stefan; Seidel, Björn; Hofbauer, Wolfgang; Rennebarth, Torsten; Renzl, Anna

    2009-05-01

    The fast and direct identification of possibly pathogenic microorganisms in air is gaining increasing interest due to their threat for public health, e.g. in clinical environments or in clean rooms of food or pharmaceutical industries. We present a new detection method allowing the direct recognition of relevant germs or bacteria via fluorescence-labeled antibodies within less than one hour. In detail, an air-sampling unit passes particles in the relevant size range to a substrate which contains antibodies with fluorescence labels for the detection of a specific microorganism. After the removal of the excess antibodies the optical detection unit comprising reflected-light and epifluorescence microscopy can identify the microorganisms by fast image processing on a single-particle level. First measurements with the system to identify various test particles as well as interfering influences have been performed, in particular with respect to autofluorescence of dust particles. Specific antibodies for the detection of Aspergillus fumigatus spores have been established. The biological test system consists of protein A-coated polymer particles which are detected by a fluorescence-labeled IgG. Furthermore the influence of interfering particles such as dust or debris is discussed.

  19. An Optokinetic Nystagmus Detection Method for Use With Young Children

    PubMed Central

    Sangi, Mehrdad; Thompson, Benjamin

    2015-01-01

    The detection of vision problems in early childhood can prevent neurodevelopmental disorders such as amblyopia. However, accurate clinical assessment of visual function in young children is challenging. optokinetic nystagmus (OKN) is a reflexive sawtooth motion of the eye that occurs in response to drifting stimuli, that may allow for objective measurement of visual function in young children if appropriate child-friendly eye tracking techniques are available. In this paper, we present offline tools to detect the presence and direction of the optokinetic reflex in children using consumer grade video equipment. Our methods are tested on video footage of children (\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{upgreek} \\usepackage{mathrsfs} \\setlength{\\oddsidemargin}{-69pt} \\begin{document} }{}$N = 5$ \\end{document} children and 20 trials) taken as they freely observed visual stimuli that induced horizontal OKN. Using results from an experienced observer as a baseline, we found the sensitivity and specificity of our OKN detection method to be 89.13% and 98.54%, respectively, across all trials. Our OKN detection results also compared well (85%) with results obtained from a clinically trained assessor. In conclusion, our results suggest that OKN presence and direction can be measured objectively in children using consumer grade equipment, and readily implementable algorithms. PMID:27170889

  20. Circulating tumor cell detection using photoacoustic spectral methods

    NASA Astrophysics Data System (ADS)

    Strohm, Eric M.; Berndl, Elizabeth S. L.; Kolios, Michael C.

    2014-03-01

    A method to detect and differentiate circulating melanoma tumor cells (CTCs) from blood cells using ultrasound and photoacoustic signals with frequencies over 100 MHz is presented. At these frequencies, the acoustic wavelength is similar to the dimensions of a cell, which results in unique features in the signal; periodically varying minima and maxima occur throughout the power spectrum. The spacing between minima depends on the ratio of the size to sound speed of the cell. Using a 532 nm pulsed laser and a 375 MHz center frequency wide-bandwidth transducer, the ultrasound and photoacoustic signals were measured from single cells. A total of 80 cells were measured, 20 melanoma cells, 20 white blood cells (WBCs) and 40 red blood cells (RBCs). The photoacoustic spectral spacing Δf between minima was 95 +/- 15 MHz for melanoma cells and greater than 230 MHz for RBCs. No photoacoustic signal was detected from WBCs. The ultrasonic spectral spacing between minima was 46 +/- 9 MHz for melanoma cells and 98 +/- 11 for WBCs. Both photoacoustic and ultrasound signals were detected from melanoma cells, while only ultrasound signals were detected from WBCs. RBCs showed distinct photoacoustic spectral variations in comparison to any other type of cell. Using the spectral spacing and signal amplitudes, each cell type could be grouped together to aid in cell identification. This method could be used for label-free counting and classifying cells in a sample.

  1. A review of damage detection methods for wind turbine blades

    NASA Astrophysics Data System (ADS)

    Li, Dongsheng; Ho, Siu-Chun M.; Song, Gangbing; Ren, Liang; Li, Hongnan

    2015-03-01

    Wind energy is one of the most important renewable energy sources and many countries are predicted to increase wind energy portion of their whole national energy supply to about twenty percent in the next decade. One potential obstacle in the use of wind turbines to harvest wind energy is the maintenance of the wind turbine blades. The blades are a crucial and costly part of a wind turbine and over their service life can suffer from factors such as material degradation and fatigue, which can limit their effectiveness and safety. Thus, the ability to detect damage in wind turbine blades is of great significance for planning maintenance and continued operation of the wind turbine. This paper presents a review of recent research and development in the field of damage detection for wind turbine blades. Specifically, this paper reviews frequently employed sensors including fiber optic and piezoelectric sensors, and four promising damage detection methods, namely, transmittance function, wave propagation, impedance and vibration based methods. As a note towards the future development trend for wind turbine sensing systems, the necessity for wireless sensing and energy harvesting is briefly presented. Finally, existing problems and promising research efforts for online damage detection of turbine blades are discussed.

  2. [Detection of Toxoplasma antibodies using the c-ELISA method].

    PubMed

    Sýkora, J; Pokorný, J; Zástĕra, M; Frühbauer, Z; Svandová, E

    1989-05-01

    Sensitive and high capacity ELISA techniques introduced for the detection of toxoplasmatic antibodies so far do not correlate very well with standard serological examination systems used in common diagnosis of Toxoplasmosis. The most frequently used method in the CSSR - SFT using tween-ether soluble antigen extract, and displaying very satisfactory agreement with the Sabin-Feldman test, was compared with the system of direct ELISA, using the same antigen extract and the described c-ELISA method. The latter method uses for antibody detection whole non-disintegrated formol-treated trophozoites of Toxoplasma gondii and thus in the reaction in particular membrane antigens, incl. latent ones, are involved. Parallel examination of 160 sera of subjects with clinical suspicion of toxoplasma infection by the standard CFT, method and methods ELISA and c-ELISA revealed a better correlation between CFT and c-ELISA (r = 0.8031) than between CFT and ELISA with soluble antigen (r = 0.6016). Other positive specific features of the c-ELISA method are the use of commercially produced antigen for the immunofluorescence test, considerable elimination of selective adsorption of the polystyrene carrier and the perspective of the long-term preservation of plates with the fixed antigen.

  3. An adaptive locally optimal method detecting weak deterministic signals

    NASA Astrophysics Data System (ADS)

    Wang, C. H.

    1983-10-01

    A new method for detecting weak signals in interference and clutter in radar systems is presented. The detector which uses this method is adaptive for an environment varying with time and locally optimal for detecting targets and constant false-alarm ratio (CFAR) for the statistics of interference and clutter varying with time. The loss of CFAR is small, and the detector is also simple in structure. The statistical equivalent transfer characteristic of a rank quantizer which can be used as part of an adaptive locally most powerful detector (ALMP) is obtained. It is shown that the distribution-free Doppler processor of Dillard (1974) is not only a nonparameter detector, but also an ALMP detector under certain conditions.

  4. Means and method of detection in chemical separation procedures

    DOEpatents

    Yeung, E.S.; Koutny, L.B.; Hogan, B.L.; Cheung, C.K.; Yinfa Ma.

    1993-03-09

    A means and method are described for indirect detection of constituent components of a mixture separated in a chemical separation process. Fluorescing ions are distributed across the area in which separation of the mixture will occur to provide a generally uniform background fluorescence intensity. For example, the mixture is comprised of one or more charged analytes which displace fluorescing ions where its constituent components separate to. Fluorescing ions of the same charge as the charged analyte components cause a displacement. The displacement results in the location of the separated components having a reduced fluorescence intensity to the remainder of the background. Detection of the lower fluorescence intensity areas can be visually, by photographic means and methods, or by automated laser scanning.

  5. Means and method of detection in chemical separation procedures

    DOEpatents

    Yeung, Edward S.; Koutny, Lance B.; Hogan, Barry L.; Cheung, Chan K.; Ma, Yinfa

    1993-03-09

    A means and method for indirect detection of constituent components of a mixture separated in a chemical separation process. Fluorescing ions are distributed across the area in which separation of the mixture will occur to provide a generally uniform background fluorescence intensity. For example, the mixture is comprised of one or more charged analytes which displace fluorescing ions where its constituent components separate to. Fluorescing ions of the same charge as the charged analyte components cause a displacement. The displacement results in the location of the separated components having a reduced fluorescence intensity to the remainder of the background. Detection of the lower fluorescence intensity areas can be visually, by photographic means and methods, or by automated laser scanning.

  6. An express immunological method for detection of human seminal plasma.

    PubMed

    Lolov, S R; Yomtova, V M; Tsankov, Y; Kehayov, I R; Kyurkchiev, S D

    1992-04-01

    Monoclonal antibodies (Mabs) against human seminal plasma (HSP) were produced and during screening procedures dissociation constants of the antigen/antibody complexes were determined. Mab 1E5 was selected for further studies because of its high reactivity in an enzyme-linked immunoassay (ELISA) and high affinity for its corresponding antigen. The specificity of Mab 1E5 was checked in absorption ELISA with human organ extracts and some biological secretions. It was established that the 1E5-corresponding epitope was a thermostable peptide moiety which could be detected in HSP, only. This monoclonal antibody was used for the development of an express method for detection of human semen. The assay was applied for screening of 57 cases of suspected rape. A complete correlation was found between the results obtained by the proposed test and by routine microscopic methods. The newly designed immunoassay is reliable, it is easily performed and it is less time-consuming. PMID:1618453

  7. Devices and methods to detect and quantify trace gases

    DOEpatents

    Allendorf, Mark D.; Robinson, Alex

    2016-05-03

    Sensing devices based on a surface acoustic wave ("SAW") device coated with an absorbent crystalline or amorphous layer for detecting at least one chemical analyte in a gaseous carrier. Methods for detecting the presence of a chemical analyte in a gaseous carrier using such devices are also disclosed. The sensing devices and methods for their use may be configured for sensing chemical analytes selected from the group consisting of water vapor, carbon dioxide, methanol, ethanol, carbon monoxide, nitric oxide, nitrous oxide, organic amines, organic compounds containing NO.sub.2 groups, halogenated hydrocarbons, acetone, hexane, toluene, isopropanol, alcohols, alkanes, alkenes, benzene, functionalized aromatics, ammonia (NH.sub.3), phosgene (COCl.sub.2), sulfur mustard, nerve agents, sulfur dioxide, tetrahydrofuran (THF) and methyltertbutyl ether (MTBE) and combinations thereof.

  8. Native Fluorescence Detection Methods, Devices, and Systems for Organic Compounds

    NASA Technical Reports Server (NTRS)

    Hug, William F. (Inventor); Bhartia, Rohit (Inventor); Reid, Ray D. (Inventor); Lane, Arthur L. (Inventor)

    2016-01-01

    Naphthalene, benzene, toluene, xylene, and other volatile organic compounds VOCs have been identified as serious health hazards. Embodiments of the invention are directed to methods and apparatus for near-real-time in-situ detection and accumulated dose measurement of exposure to naphthalene vapor and other hazardous gaseous VOCs. The methods and apparatus employ excitation of fluorophors native or endogenous to compounds of interest using light sources emitting in the ultraviolet below 300 nm and measurement of native fluorescence emissions in distinct wavebands above the excitation wavelength. The apparatus of some embodiments are cell-phone-sized sensor/dosimeter "badges" to be worn by personnel potentially exposed to hazardous VOCs. The badge sensor of some embodiments provides both real time detection and data logging of exposure to naphthalene or other VOCs of interest from which both instantaneous and accumulated dose can be determined.

  9. Drop weight impact measurements of HE sensitivity: modified detection methods

    NASA Astrophysics Data System (ADS)

    Preston, D. N.; Brown, G. W.; Tappan, B. C.; Oshwald, D. M.; Koby, J. R.; Schoonover, M. L.

    2014-05-01

    High explosives small-scale sensitivity testing has been a hallmark of safety screening since WWII. Sensitivity testing was once crude and simple; broom sticks were used to scrape explosives on the floor while experimenters would look, listen, and smell for signs of a reaction. Since then, a wide variety of testing apparatus have been developed to explore the effects of different stimuli on explosives. In concert with the development of the machines themselves, the reaction detection methods have also evolved. This paper's focus is on the Los Alamos National Laboratory's (LANL) drop weight impact machine and reaction detection methods. A critical evaluation of results is presented with cautionary examples of false positives that can occur with non-explosive materials.

  10. Bacterial contamination of platelet concentrates: pathogen detection and inactivation methods

    PubMed Central

    Védy, Dana; Robert, Daniel; Gasparini, Danielle; Canellini, Giorgia; Waldvogel, Sophie; Tissot, Jean-Daniel

    2009-01-01

    Whereas the reduction of transfusion related viral transmission has been a priority during the last decade, bacterial infection transmitted by transfusion still remains associated to a high morbidity and mortality, and constitutes the most frequent infectious risk of transfusion. This problem especially concerns platelet concentrates because of their favorable bacterial growth conditions. This review gives an overview of platelet transfusion-related bacterial contamination as well as on the different strategies to reduce this problem by using either bacterial detection or inactivation methods.

  11. A multivariate based event detection method and performance comparison with two baseline methods.

    PubMed

    Liu, Shuming; Smith, Kate; Che, Han

    2015-09-01

    Early warning systems have been widely deployed to protect water systems from accidental and intentional contamination events. Conventional detection algorithms are often criticized for having high false positive rates and low true positive rates. This mainly stems from the inability of these methods to determine whether variation in sensor measurements is caused by equipment noise or the presence of contamination. This paper presents a new detection method that identifies the existence of contamination by comparing Euclidean distances of correlation indicators, which are derived from the correlation coefficients of multiple water quality sensors. The performance of the proposed method was evaluated using data from a contaminant injection experiment and compared with two baseline detection methods. The results show that the proposed method can differentiate between fluctuations caused by equipment noise and those due to the presence of contamination. It yielded higher possibility of detection and a lower false alarm rate than the two baseline methods. With optimized parameter values, the proposed method can correctly detect 95% of all contamination events with a 2% false alarm rate.

  12. Improved Collision-Detection Method for Robotic Manipulator

    NASA Technical Reports Server (NTRS)

    Leger, Chris

    2003-01-01

    An improved method has been devised for the computational prediction of a collision between (1) a robotic manipulator and (2) another part of the robot or an external object in the vicinity of the robot. The method is intended to be used to test commanded manipulator trajectories in advance so that execution of the commands can be stopped before damage is done. The method involves utilization of both (1) mathematical models of the robot and its environment constructed manually prior to operation and (2) similar models constructed automatically from sensory data acquired during operation. The representation of objects in this method is simpler and more efficient (with respect to both computation time and computer memory), relative to the representations used in most prior methods. The present method was developed especially for use on a robotic land vehicle (rover) equipped with a manipulator arm and a vision system that includes stereoscopic electronic cameras. In this method, objects are represented and collisions detected by use of a previously developed technique known in the art as the method of oriented bounding boxes (OBBs). As the name of this technique indicates, an object is represented approximately, for computational purposes, by a box that encloses its outer boundary. Because many parts of a robotic manipulator are cylindrical, the OBB method has been extended in this method to enable the approximate representation of cylindrical parts by use of octagonal or other multiple-OBB assemblies denoted oriented bounding prisms (OBPs), as in the example of Figure 1. Unlike prior methods, the OBB/OBP method does not require any divisions or transcendental functions; this feature leads to greater robustness and numerical accuracy. The OBB/OBP method was selected for incorporation into the present method because it offers the best compromise between accuracy on the one hand and computational efficiency (and thus computational speed) on the other hand.

  13. Mobile Detection of Fugitive Emissions using Computationally Optimized Geochemical Methods

    NASA Astrophysics Data System (ADS)

    Marshall, A. D.; Risk, D. A.; Lavoie, M.; Brooks, B. G.; Macintyre, C. M.; Baillie, J.; Laybolt, W. D.; Williams, J. P.; Goeckede, M.; Phillips, C. L.

    2015-12-01

    The grand challenge of surface leak monitoring is to detect and attribute even small leaks across large energy development sites, which often span hundreds of square kilometres. Ratio-based geochemical methods show great potential for near-surface leak detection and attribution in vehicle-based mobile surveys. Ratios are useful especially when applied to concentration anomalies that exceed the Ambient Background (ABG), because they preserve the ratio of emission, and allow for more definitive attribution. Predicting ABG is, however, difficult because its variance originates from many processes including atmospheric patterns, local vegetation, other natural factors, and human activity. Here we present a method of vehicle-based atmospheric leak detection. We have developed a signal conditioning process for accommodating a variable ABG throughout a survey dataset. ABG is the lowest value of a species within a time interval of variable length, and anomalies are detected when ratios of excess concentration (above ABG) exceed defined ratio limits based on expected sources. We computationally iterate through many configurations of ABG time interval and other parameters to find an optimized scenario. In surveys of CH4, δ13CH4, CO2 and H2S at a large energy development with active infrastructure, we compared our technique to a concentration threshold detection technique (2 ppm CH4), and a variation of our process where ABG is assumed to be the lowest dataset value. Across ~1500 km of survey data, our process detected 8 times more leak anomalies than did the threshold technique. The lowest value background technique detected a similar number of leak anomalies as the optimized ABG, but was oversensitive to combustion (CO2-rich) emissions. With the optimized scenarios we observed some persistent leak anomalies in as many as 50% of survey passes, throughout different seasons and wind conditions. Leak persistence showed no significant relationship to leak size. CO2-rich leaks

  14. New feedback detection method for performance evaluation of hearing aids

    NASA Astrophysics Data System (ADS)

    Shin, Mincheol; Wang, Semyung; Bentler, Ruth A.; He, Shuman

    2007-04-01

    New objective and accurate feedback detection method, transfer function variation criterion (TVC), has been developed for evaluating the performance of feedback cancellation techniques. The proposed method is able to classify stable, unstable, and sub-oscillatory stages of feedback in hearing aids. The sub-oscillatory stage is defined as a state where the hearing aid user may perceive distortion of sound quality without the occurrence of oscillation. This detection algorithm focuses on the transfer function variation of hearing aids and the relationship between system stability and feedback oscillation. The transfer functions are obtained using the FIR Wiener filtering algorithm off-line. An anechoic test box is used for the exact and reliable evaluation of different hearing aids. The results are listed and compared with the conventional power concentration ratio (PCR), which has been generally adopted as a feedback detection method for the performance evaluation of hearing aids. The possibility of real-time implementation is discussed in terms of a more convenient and exact performance evaluation of feedback cancellation techniques.

  15. A review of methods for detect human Papillomavirus infection

    PubMed Central

    2012-01-01

    Human Papillomavirus (HPV) is the most common sexually transmitted virus. Worldwide, the most common high-risk (HR)-HPV are -16/18, and approximately 70% of cervical cancers (CC) are due to infection by these genotypes. Persistent infection by HR-HPV is a necessary but not sufficient cause of this cancer, which develops over a long period through precursor lesions, which can be detected by cytological screening. Although this screening has decreased the incidence of CC, HPV-related cervical disease, including premalignant and malignant lesions, continues to be a major burden on health-care systems. Although not completely elucidated, the HPV-driven molecular mechanisms underlying the development of cervical lesions have provided a number of potential biomarkers for both diagnostic and prognostic use in the clinical management of women with HPV-related cervical disease, and these biomarkers can also be used to increase the positive predictive value of current screening methods. In addition, they can provide insights into the biology of HPV-induced cancer and thus lead to the development of nonsurgical therapies. Considering the importance of detecting HPV and related biomarkers, a variety of methods are being developed for these purposes. This review summarizes current knowledge of detection methods for HPV, and related biomarkers that can be used to discriminate lesions with a high risk of progression to CC. PMID:23131123

  16. New qualitative detection methods of genetically modified potatoes.

    PubMed

    Watanabe, Takahiro; Kuribara, Hideo; Mishima, Takashi; Kikuchi, Hiroyuki; Kodama, Takashi; Futo, Satoshi; Kasama, Kikuko; Toyota, Akie; Nouno, Masanori; Saita, Ayako; Takahashi, Kunihiko; Hino, Akihiro; Akiyama, Hiroshi; Maitani, Tamio; Kubo, Misao

    2004-09-01

    In Japan, 8 lines of genetically modified (GM) potato (2 lines of NewLeaf potato; NL, 3 lines of NewLeaf Plus potato; NLP, and 3 lines of NewLeaf Y potato; NLY) have already been authorized as safe for use in foods and feeds. We have developed polymerase chain reaction (PCR) methods for the qualitative detection of the GM potatoes for the screening and the identification of NL, NLP and NLY. The gene encoding uridine diphosphate (UDP)-glucose pyrophosphorylase (UGPase) was used as a taxon specific gene. We designed the primer pair to detect the cryIIIA genes as a screening method for GM potatoes because the gene should be inserted in all 8 lines of the GM potatoes. For identification of NL, NLP and NLY, we further designed three specific primer pairs for the different recombinant DNAs (r-DNA) specifically introduced into NL, NLP, or NLY. In addition, to identify the 3 lines of NLY that have been introduced with the same r-DNA, the three line-specific primer pairs for the border sequence between the r-DNA and genomic DNA of NLY 3 lines were designed. Six lines of GM potato used as the test material were specifically identified using the each primer pair under the same PCR condition. The detection limits of all the GM potatoes should be approximately 0.1%. Furthermore, the specificity and reproducibility of the methods were confirmed in a six-laboratory collaborative study. PMID:15340215

  17. A review of methods for detect human Papillomavirus infection.

    PubMed

    Abreu, André L P; Souza, Raquel P; Gimenes, Fabrícia; Consolaro, Marcia E L

    2012-11-06

    Human Papillomavirus (HPV) is the most common sexually transmitted virus. Worldwide, the most common high-risk (HR)-HPV are -16/18, and approximately 70% of cervical cancers (CC) are due to infection by these genotypes. Persistent infection by HR-HPV is a necessary but not sufficient cause of this cancer, which develops over a long period through precursor lesions, which can be detected by cytological screening. Although this screening has decreased the incidence of CC, HPV-related cervical disease, including premalignant and malignant lesions, continues to be a major burden on health-care systems. Although not completely elucidated, the HPV-driven molecular mechanisms underlying the development of cervical lesions have provided a number of potential biomarkers for both diagnostic and prognostic use in the clinical management of women with HPV-related cervical disease, and these biomarkers can also be used to increase the positive predictive value of current screening methods. In addition, they can provide insights into the biology of HPV-induced cancer and thus lead to the development of nonsurgical therapies. Considering the importance of detecting HPV and related biomarkers, a variety of methods are being developed for these purposes. This review summarizes current knowledge of detection methods for HPV, and related biomarkers that can be used to discriminate lesions with a high risk of progression to CC.

  18. Method and apparatus for detecting gem-polyhalogenated hydrocarbons

    DOEpatents

    Anderson, deceased, William G.; Anderson, legal representative, Johanna S.

    1990-01-01

    A method and optrode for detecting gem polyhalogenated hydrocarbons in a sample fluid based on a single phase Fujiwara reaction as provided. The method comprises contacting a reaction mixture with a sample fluid which contains the gem-polyhalogenated hydrocarbons. The reaction mixture comprises an aqueous solution of pyridine or derivative thereof and a hindered nitrogen base. Upon contact a fluorescent and/or chromgenic reaction product forms whose fluorescence and/or absorbance is related to the concentration of gem-polyhalogenated hydrocarbons in the sample fluid.

  19. Performance of Neural Networks Methods In Intrusion Detection

    SciTech Connect

    Dao, V N; Vemuri, R

    2001-07-09

    By accurately profiling the users via their unique attributes, it is possible to view the intrusion detection problem as a classification of authorized users and intruders. This paper demonstrates that artificial neural network (ANN) techniques can be used to solve this classification problem. Furthermore, the paper compares the performance of three neural networks methods in classifying authorized users and intruders using synthetically generated data. The three methods are the gradient descent back propagation (BP) with momentum, the conjugate gradient BP, and the quasi-Newton BP.

  20. Method for early detection of cooling-loss events

    DOEpatents

    Bermudez, Sergio A.; Hamann, Hendrik F.; Marianno, Fernando J.

    2015-12-22

    A method of detecting cooling-loss event early is provided. The method includes defining a relative humidity limit and change threshold for a given space, measuring relative humidity in the given space, determining, with a processing unit, whether the measured relative humidity is within the defined relative humidity limit, generating a warning in an event the measured relative humidity is outside the defined relative humidity limit and determining whether a change in the measured relative humidity is less than the defined change threshold for the given space and generating an alarm in an event the change is greater than the defined change threshold.

  1. Method for early detection of cooling-loss events

    DOEpatents

    Bermudez, Sergio A.; Hamann, Hendrik; Marianno, Fernando J.

    2015-06-30

    A method of detecting cooling-loss event early is provided. The method includes defining a relative humidity limit and change threshold for a given space, measuring relative humidity in the given space, determining, with a processing unit, whether the measured relative humidity is within the defined relative humidity limit, generating a warning in an event the measured relative humidity is outside the defined relative humidity limit and determining whether a change in the measured relative humidity is less than the defined change threshold for the given space and generating an alarm in an event the change is greater than the defined change threshold.

  2. Cepstrum based feature extraction method for fungus detection

    NASA Astrophysics Data System (ADS)

    Yorulmaz, Onur; Pearson, Tom C.; Çetin, A. Enis

    2011-06-01

    In this paper, a method for detection of popcorn kernels infected by a fungus is developed using image processing. The method is based on two dimensional (2D) mel and Mellin-cepstrum computation from popcorn kernel images. Cepstral features that were extracted from popcorn images are classified using Support Vector Machines (SVM). Experimental results show that high recognition rates of up to 93.93% can be achieved for both damaged and healthy popcorn kernels using 2D mel-cepstrum. The success rate for healthy popcorn kernels was found to be 97.41% and the recognition rate for damaged kernels was found to be 89.43%.

  3. Steganography forensics method for detecting least significant bit replacement attack

    NASA Astrophysics Data System (ADS)

    Wang, Xiaofeng; Wei, Chengcheng; Han, Xiao

    2015-01-01

    We present an image forensics method to detect least significant bit replacement steganography attack. The proposed method provides fine-grained forensics features by using the hierarchical structure that combines pixels correlation and bit-planes correlation. This is achieved via bit-plane decomposition and difference matrices between the least significant bit-plane and each one of the others. Generated forensics features provide the susceptibility (changeability) that will be drastically altered when the cover image is embedded with data to form a stego image. We developed a statistical model based on the forensics features and used least square support vector machine as a classifier to distinguish stego images from cover images. Experimental results show that the proposed method provides the following advantages. (1) The detection rate is noticeably higher than that of some existing methods. (2) It has the expected stability. (3) It is robust for content-preserving manipulations, such as JPEG compression, adding noise, filtering, etc. (4) The proposed method provides satisfactory generalization capability.

  4. Statistical method for detecting structural change in the growth process.

    PubMed

    Ninomiya, Yoshiyuki; Yoshimoto, Atsushi

    2008-03-01

    Due to competition among individual trees and other exogenous factors that change the growth environment, each tree grows following its own growth trend with some structural changes in growth over time. In the present article, a new method is proposed to detect a structural change in the growth process. We formulate the method as a simple statistical test for signal detection without constructing any specific model for the structural change. To evaluate the p-value of the test, the tube method is developed because the regular distribution theory is insufficient. Using two sets of tree diameter growth data sampled from planted forest stands of Cryptomeria japonica in Japan, we conduct an analysis of identifying the effect of thinning on the growth process as a structural change. Our results demonstrate that the proposed method is useful to identify the structural change caused by thinning. We also provide the properties of the method in terms of the size and power of the test. PMID:17608782

  5. Optimization of methods for detecting norovirus on various fruit.

    PubMed

    Kim, Hee-Yeon; Kwak, In-Shin; Hwang, In-Gyun; Ko, GwangPyo

    2008-11-01

    Methods for detecting norovirus (NoV) in food are crucial for investigation and prevention of outbreaks caused by NoV-contaminated food. However, current NoV detection methods have not been well examined or optimized. In this study, the effectiveness of various methods for eluting NoV from various fruit, concentrating the virus using polyethylene glycol (PEG), and extracting the viral RNA for subsequent assay by RT-PCR was optimized. First, six different buffers previously described for eluting NoV from fruit surfaces were evaluated. A known amount of NoV was spiked onto the surface of grapes, strawberries, and raspberries, and the virus was recovered with distilled water, 0.05 M glycine-0.14 M NaCl (pH 7.5), 2.9% tryptose phosphate broth-6% glycine, 100 mM Tris-HCl (pH 9.5), 50 mM glycine-50 mM MgCl(2) (pH 9.5), or 3% beef extract. Quantitation of the recovered virus using RT-PCR revealed that the most effective elution buffer was 3% beef extract. Secondly, to optimize a method for concentrating the recovered NoV, the key parameters of PEG precipitation, a typical method for concentrating enteric virus, were investigated. The influence of PEG molecular weight and the duration and temperature of the precipitation procedure were examined. NoV was concentrated most efficiently by precipitation when PEG (10,000) was used for 4h at room temperature. Finally, five different methods for nucleic acid extraction were evaluated. Among RNA extraction methods examined, QIAamp Viral RNA Mini kit showed the best recovery efficiency. Using the optimized method, approximately 6-80% of the seeded NoV was recovered from the various fruit.

  6. Comparison of three molecular detection methods for detection of Trichinella in infected pigs.

    PubMed

    Lin, Zhibing; Cao, Jie; Zhang, Houshuang; Zhou, Yongzhi; Deng, Mingjun; Li, Guoqing; Zhou, Jinlin

    2013-05-01

    Different molecular detection methods require diverse molecular platforms, but there is no uniform standard for people to reference in the detection of Trichinella. In this study, real-time PCR, loop-mediated isothermal amplification (LAMP), and conventional PCR were developed for the detection of Trichinella by targeting mitochondrial large subunit ribosomal DNA (mt-lsrDNA). We compared the performance of the three newly developed assays. The results revealed that the detection limits of the real-time PCR, LAMP, and conventional PCR assays were 10 and 100 fg/μL and 1 pg/μL of Trichinella spiralis genomic DNA, respectively. The assays were used in the detection of Trichinella in the field. A total of 192 samples were obtained from pigs: 75 samples from free range farming and 117 from intensive feeding factory. The infection rate was 8/192 (4.2 %), 7/192 (3.6 %), and 1/192 (1.0 %) through the real-time PCR, LAMP, and conventional PCR assays, respectively. These data indicate that Taqman real-time PCR was a rapid, specific, and sensitive tool as a preferred option for investigation of valuable samples, but that LAMP assay was closed tube, highly sensitive, cost-effective, rapid, easy-to-perform, and was the optimal choice for detection of Trichinella in the field. The results of a model of experimental infection in mice indicated that spleen can be used as sampling site for the detection of early T. spiralis infection. However, the diaphragm and myocardium were the most suitable sampling sites for the detection of T. spiralis. PMID:23334692

  7. Comparison of three molecular detection methods for detection of Trichinella in infected pigs.

    PubMed

    Lin, Zhibing; Cao, Jie; Zhang, Houshuang; Zhou, Yongzhi; Deng, Mingjun; Li, Guoqing; Zhou, Jinlin

    2013-05-01

    Different molecular detection methods require diverse molecular platforms, but there is no uniform standard for people to reference in the detection of Trichinella. In this study, real-time PCR, loop-mediated isothermal amplification (LAMP), and conventional PCR were developed for the detection of Trichinella by targeting mitochondrial large subunit ribosomal DNA (mt-lsrDNA). We compared the performance of the three newly developed assays. The results revealed that the detection limits of the real-time PCR, LAMP, and conventional PCR assays were 10 and 100 fg/μL and 1 pg/μL of Trichinella spiralis genomic DNA, respectively. The assays were used in the detection of Trichinella in the field. A total of 192 samples were obtained from pigs: 75 samples from free range farming and 117 from intensive feeding factory. The infection rate was 8/192 (4.2 %), 7/192 (3.6 %), and 1/192 (1.0 %) through the real-time PCR, LAMP, and conventional PCR assays, respectively. These data indicate that Taqman real-time PCR was a rapid, specific, and sensitive tool as a preferred option for investigation of valuable samples, but that LAMP assay was closed tube, highly sensitive, cost-effective, rapid, easy-to-perform, and was the optimal choice for detection of Trichinella in the field. The results of a model of experimental infection in mice indicated that spleen can be used as sampling site for the detection of early T. spiralis infection. However, the diaphragm and myocardium were the most suitable sampling sites for the detection of T. spiralis.

  8. The photometric method of extrasolar planet detection revisited

    NASA Technical Reports Server (NTRS)

    Hale, Alan; Doyle, Laurance R.

    1994-01-01

    We investigate the geometry concerning the photometric method of extrasolar planet detection, i.e., the detection of dimunition of a parent star's brightness during a planetary transit. Under the assumption that planetary orbital inclinations can be defined by a Gaussian with a sigma of 10 deg centered on the parent star's equatorial plane, Monte Carlo simulations suggest that for a given star observed at an inclination of exactly 90 deg, the probability of at least one Earth-sized or larger planet being suitably placed for transits is approximately 4%. This probability drops to 3% for a star observed at an inclination of 80 deg, and is still approximately 0.5% for a star observed at an inclination of 60 deg. If one can select 100 stars with a pre-determined inclination equal or greater than 80 deg, the probability of at least one planet being suitably configured for transits is 95%. The majority of transit events are due to planets in small-a orbits similar to the Earth and Venus; thus, the photometric method in principle is the method best suited for the detection of Earthlike planets. The photometric method also allows for testing whether or not planets can exist within binary systems. This can ge done by selecting binary systems observed at high orbital inclinations, both eclipsing binaries and wider visual binaries. For a 'real-world' example, we look at the alpha Centauri system (i = 79.2 deg). If we assume that the equatorial planes of both components coincide with the system's orbital plane, Monte Carlo simulations suggest that the probability of at least one planet (of either component) being suitably configured for transits is approximately 8%. In conclusion, we present a non-exhaustive list of solar-type stars, both single and within binary systems, which exhibit a high equatorial inclination. These objects may be considered as preliminary candidates for planetary searches via the photometric method.

  9. InstantLabs® Salmonella species detection method: matrix extension.

    PubMed

    Sharma, Neil; Bambusch, Lauren; Le, Thu; Morey, Amit; Hayman, Melinda; Montez, Sergio J

    2014-01-01

    The performance of InstantLabs® Salmonella Species Food Safety Kit to detect Salmonella in four food matrixes was validated against the International Organization for Standardization (ISO) reference method 6579:2002. The matrixes (raw ground beef, raw chicken breast, raw ground chicken, and lettuce) were inoculated with low levels of Salmonella (<1 CFU/test portion) to generate fractional positives (5-15) in 20 inoculated samples. These matrixes were co-inoculated with Escherichia coli O157:H7 at two to five times the level of Salmonella. Samples were validated using 375 g (meat) or 25 g (lettuce and poultry) test portions enriched in FASTGRO TM SE at 42±1 °C for 12 h and 10 h, respectively. All samples were confirmed using the ISO reference method, regardless of initial-screen result. The InstantLabs test method was shown to perform as well as or better than the reference method for the detection of Salmonella species in ground beef, chicken breast, ground chicken, and lettuce. Inclusivity and exclusivity testing revealed no false negatives among the 100 Salmonella serovars and no false positives among the 30 non-Salmonella species examined, respectively.

  10. New High-Accuracy Methods for Automatically Detecting & Tracking CMEs

    NASA Astrophysics Data System (ADS)

    Byrne, Jason; Morgan, H.; Habbal, S. R.

    2012-05-01

    With the large amounts of CME image data available from the SOHO and STEREO coronagraphs, manual cataloguing of events can be tedious and subject to user bias. Therefore automated catalogues, such as CACTus and SEEDS, have been developed in an effort to produce a robust method of detection and analysis of events. Here we present the development of a new CORIMP (coronal image processing) CME detection and tracking technique that overcomes many of the drawbacks of previous methods. It works by first employing a dynamic CME separation technique to remove the static background, and then characterizing CMEs via a multiscale edge-detection algorithm. This allows the inherent structure of the CMEs to be revealed in each image, which is usually prone to spatiotemporal crosstalk as a result of traditional image-differencing techniques. Thus the kinematic and morphological information on each event is resolved with higher accuracy than previous catalogues, revealing CME acceleration and expansion profiles otherwise undetected, and enabling a determination of the varying speeds attained across the span of the CME. The potential for a 3D characterization of the internal structure of CMEs is also demonstrated.

  11. Land mine detection by time reversal acousto-seismic method

    NASA Astrophysics Data System (ADS)

    Sutin, Alexander; Sarvazyan, Armen; Johnson, Paul; Tencate, James

    2001-05-01

    We present a concept and results of a pilot study on land mine detection based on the use of time reversal acoustics (TRA). TRA provides a possibility of highly effective concentrating of seismic wave energy in time and space in complex heterogeneous media. TRA focusing of seismic waves on a land mine increases the detection abilities of conventional linear and nonlinear acousto-seismic methods. Such factors as medium inhomogeneities, presence of reflecting boundaries, which could critically limit conventional acoustic approaches, do not affect TRA based method. The TRA mine detection system comprises several air borne or seismic sources and a noncontact (laser vibrometer) device for remote measurements of the surface vibration. The TRA system focuses a seismic wave at a surface point where the vibration is measured. The focusing point is scanned across the search area. The amplitude and frequency dependence of the signal from the seismic wave focusing point and nonlinear acoustic effects are analyzed to assess probability of the mine presence. Preliminary experiments confirmed high focusing ability of the TRA seismo-acoustic system in complex conditions (a laboratory tank with sand) and demonstrated a significant increase in the surface vibration in the presence of mine imitator. [Work supported by DoD grant.

  12. Rapid and robust detection methods for poison and microbial contamination.

    PubMed

    Hoehl, Melanie M; Lu, Peter J; Sims, Peter A; Slocum, Alexander H

    2012-06-27

    Real-time on-site monitoring of analytes is currently in high demand for food contamination, water, medicines, and ingestible household products that were never tested appropriately. Here we introduce chemical methods for the rapid quantification of a wide range of chemical and microbial contaminations using a simple instrument. Within the testing procedure, we used a multichannel, multisample, UV-vis spectrophotometer/fluorometer that employs two frequencies of light simultaneously to interrogate the sample. We present new enzyme- and dye-based methods to detect (di)ethylene glycol in consumables above 0.1 wt % without interference and alcohols above 1 ppb. Using DNA intercalating dyes, we can detect a range of pathogens ( E. coli , Salmonella , V. Cholera, and a model for Malaria) in water, foods, and blood without background signal. We achieved universal scaling independent of pathogen size above 10(4) CFU/mL by taking advantage of the simultaneous measurement at multiple wavelengths. We can detect contaminants directly, without separation, purification, concentration, or incubation. Our chemistry is stable to ± 1% for >3 weeks without refrigeration, and measurements require <5 min.

  13. Serological versus antigen detection methods for Giardia duodenalis diagnosis.

    PubMed

    Bashir, M; Farid, A; Rabia, I; Mostafa, B; El Amir, A

    2014-12-01

    Giardiasis constitutes an important public health problem in the world. Contamination of the water with fecal materials including viruses and pathogenic protozoa still represents an environmental health hazard, especially in rural areas. The survey study evaluated the relation between seropositivity and some risk factors. Moreover, the study compared between the serological IgG and IgM level and antigen detection methods for the diagnosis of giardiasis. The results indicate that sex distribution and age were the mean risk factors for seroprevelence. In this study, sera samples were employed in sandwich ELISA assay, to detect circulating Giardia antigens. None of the negative control serum samples gave a positive reaction, but cross reaction was encountered with 3 case of Cryptosporidium. The specificity of the assay was 94.830/a. On the other hand, the sensitivity of the Giardia patient's sera was 94.12% which was higher than that of IgG (86.25%) and IgM (87.50%) secretion measurements. In conclusion, antigen detection methods give better and earlier diagnosis for giardiasis can be performed quickly and do not require an experienced and skilled morphologist. PMID:25643512

  14. Method for universal detection of two-photon polarization entanglement

    NASA Astrophysics Data System (ADS)

    Bartkiewicz, Karol; Horodecki, Paweł; Lemr, Karel; Miranowicz, Adam; Życzkowski, Karol

    2015-03-01

    Detecting and quantifying quantum entanglement of a given unknown state poses problems that are fundamentally important for quantum information processing. Surprisingly, no direct (i.e., without quantum tomography) universal experimental implementation of a necessary and sufficient test of entanglement has been designed even for a general two-qubit state. Here we propose an experimental method for detecting a collective universal witness, which is a necessary and sufficient test of two-photon polarization entanglement. It allows us to detect entanglement for any two-qubit mixed state and to establish tight upper and lower bounds on its amount. A different element of this method is the sequential character of its main components, which allows us to obtain relatively complicated information about quantum correlations with the help of simple linear-optical elements. As such, this proposal realizes a universal two-qubit entanglement test within the present state of the art of quantum optics. We show the optimality of our setup with respect to the minimal number of measured quantities.

  15. Methods of detecting and counting raptors: A review

    USGS Publications Warehouse

    Fuller, M.R.; Mosher, J.A.; Ralph, C. John; Scott, J. Michael

    1981-01-01

    Most raptors are wide-ranging, secretive, and occur at relatively low densities. These factors, in conjunction with the nocturnal activity of owls, cause the counting of raptors by most standard census and survey efforts to be very time consuming and expensive. This paper reviews the most common methods of detecting and counting raptors. It is hoped that it will be of use to the ever-increasing number of biologists, land-use planners, and managers that must determine the occurrence, density, or population dynamics of raptors. Road counts of fixed station or continuous transect design are often used to sample large areas. Detection of spontaneous or elicited vocalizations, especially those of owls, provides a means of detecting and estimating raptor numbers. Searches for nests are accomplished from foot surveys, observations from automobiles and boats, or from aircraft when nest structures are conspicuous (e.g., Osprey). Knowledge of nest habitat, historic records, and inquiries of local residents are useful for locating nests. Often several of these techniques are combined to help find nest sites. Aerial searches have also been used to locate or count large raptors (e.g., eagles), or those that may be conspicuous in open habitats (e.g., tundra). Counts of birds entering or leaving nest colonies or colonial roosts have been attempted on a limited basis. Results from Christmas Bird Counts have provided an index of the abundance of some species. Trapping and banding generally has proven to be an inefficient method of detecting raptors or estimating their populations. Concentrations of migrants at strategically located points around the world afford the best opportunity to count many rap tors in a relatively short period of time, but the influence of many unquantified variables has inhibited extensive interpretation of these counts. Few data exist to demonstrate the effectiveness of these methods. We believe more research on sampling techniques, rather than complete

  16. Detection method for avian influenza viruses in water.

    PubMed

    Rönnqvist, Maria; Ziegler, Thedi; von Bonsdorff, Carl-Henrik; Maunula, Leena

    2012-03-01

    Recent events have shown that humans may become infected with some pathogenic avian influenza A viruses (AIV). Since soil and water, including lakes, rivers, and seashores, may be contaminated by AIV excreted by birds, effective methods are needed for monitoring water for emerging viruses. Combining water filtration with molecular methods such as PCR is a fast and effective way for detecting viruses. The objective of this study was to apply a convenient method for the detection of AIV in natural water samples. Distilled water and lake, river, and seawater were artificially contaminated with AIV (H5N3) and passed through a filter system. AIV was detected from filter membrane by real-time RT-PCR. The performance of Zetapor, SMWP, and Sartobind D5F membranes in recovering influenza viruses was first evaluated using contaminated distilled water. SWMP, which gave the highest virus recoveries, was then compared with a pre-filter combined GF/F filter membrane in a trial using natural water samples. In this study, the cellulose membrane SMWP was found to be practical for recovery of AIVs in water. Viral yields varied between 62.1 and 65.9% in distilled water and between 1 and 16.7% in natural water samples. The borosilicate glass membrane GF/F combined with pre-filter was also feasible in filtering natural water samples with viral yields from 1.98 to 7.33%. The methods described can be used for monitoring fresh and seawater samples for the presence of AIV and to determine the source of AIV transmission in an outbreak situation. PMID:23412765

  17. Detection method for avian influenza viruses in water.

    PubMed

    Rönnqvist, Maria; Ziegler, Thedi; von Bonsdorff, Carl-Henrik; Maunula, Leena

    2012-03-01

    Recent events have shown that humans may become infected with some pathogenic avian influenza A viruses (AIV). Since soil and water, including lakes, rivers, and seashores, may be contaminated by AIV excreted by birds, effective methods are needed for monitoring water for emerging viruses. Combining water filtration with molecular methods such as PCR is a fast and effective way for detecting viruses. The objective of this study was to apply a convenient method for the detection of AIV in natural water samples. Distilled water and lake, river, and seawater were artificially contaminated with AIV (H5N3) and passed through a filter system. AIV was detected from filter membrane by real-time RT-PCR. The performance of Zetapor, SMWP, and Sartobind D5F membranes in recovering influenza viruses was first evaluated using contaminated distilled water. SWMP, which gave the highest virus recoveries, was then compared with a pre-filter combined GF/F filter membrane in a trial using natural water samples. In this study, the cellulose membrane SMWP was found to be practical for recovery of AIVs in water. Viral yields varied between 62.1 and 65.9% in distilled water and between 1 and 16.7% in natural water samples. The borosilicate glass membrane GF/F combined with pre-filter was also feasible in filtering natural water samples with viral yields from 1.98 to 7.33%. The methods described can be used for monitoring fresh and seawater samples for the presence of AIV and to determine the source of AIV transmission in an outbreak situation.

  18. Method of detecting luminescent target ions with modified magnetic microspheres

    DOEpatents

    Shkrob, Ilya A; Kaminski, Michael D

    2014-05-13

    This invention provides methods of using modified magnetic microspheres to extract target ions from a sample in order to detect their presence in a microfluidic environment. In one or more embodiments, the microspheres are modified with molecules on the surface that allow the target ions in the sample to form complexes with specific ligand molecules on the microsphere surface. In one or more embodiments, the microspheres are modified with molecules that sequester the target ions from the sample, but specific ligand molecules in solution subsequently re-extract the target ions from the microspheres into the solution, where the complexes form independent of the microsphere surface. Once the complexes form, they are exposed to an excitation wavelength light source suitable for exciting the target ion to emit a luminescent signal pattern. Detection of the luminescent signal pattern allows for determination of the presence of the target ions in the sample.

  19. System and Method for Outlier Detection via Estimating Clusters

    NASA Technical Reports Server (NTRS)

    Iverson, David J. (Inventor)

    2016-01-01

    An efficient method and system for real-time or offline analysis of multivariate sensor data for use in anomaly detection, fault detection, and system health monitoring is provided. Models automatically derived from training data, typically nominal system data acquired from sensors in normally operating conditions or from detailed simulations, are used to identify unusual, out of family data samples (outliers) that indicate possible system failure or degradation. Outliers are determined through analyzing a degree of deviation of current system behavior from the models formed from the nominal system data. The deviation of current system behavior is presented as an easy to interpret numerical score along with a measure of the relative contribution of each system parameter to any off-nominal deviation. The techniques described herein may also be used to "clean" the training data.

  20. Signal detection methods for measurement of utility in animals.

    PubMed

    Wright, A A; Nevin, J A

    1974-03-01

    Analytic methods of signal detection theory were employed to assess the utility of reinforcers. Four pigeons were trained to detect the presence or absence of a stimulus by pecking one of two side keys in a trial-by-trial choice paradigm. The relative rate of positive reinforcement for correct choices was varied to offset the biasing effects of electric shock for incorrect right side-key choices. The effects of relative rate of reinforcement on bias were similar at all shock intensities even though the subjects' sensitivity changed during the course of the experiment. The relative rate of reinforcement required to produce equal bias was calculated and plotted against shock intensity to generate utility functions. The relative rate of reinforcement necessary to offset the bias induced by shock was an increasing function of shock intensity.

  1. Note: A manifold ranking based saliency detection method for camera

    NASA Astrophysics Data System (ADS)

    Zhang, Libo; Sun, Yihan; Luo, Tiejian; Rahman, Mohammad Muntasir

    2016-09-01

    Research focused on salient object region in natural scenes has attracted a lot in computer vision and has widely been used in many applications like object detection and segmentation. However, an accurate focusing on the salient region, while taking photographs of the real-world scenery, is still a challenging task. In order to deal with the problem, this paper presents a novel approach based on human visual system, which works better with the usage of both background prior and compactness prior. In the proposed method, we eliminate the unsuitable boundary with a fixed threshold to optimize the image boundary selection which can provide more precise estimations. Then, the object detection, which is optimized with compactness prior, is obtained by ranking with background queries. Salient objects are generally grouped together into connected areas that have compact spatial distributions. The experimental results on three public datasets demonstrate that the precision and robustness of the proposed algorithm have been improved obviously.

  2. Comparative analysis of different methods to detect Clostridium difficile infection.

    PubMed

    Calderaro, Adriana; Buttrini, Mirko; Martinelli, Monica; Gorrini, Chiara; Montecchini, Sara; Medici, Maria Cristina; Arcangeletti, Maria Cristina; De Conto, Flora; Covan, Silvia; Chezzi, Carlo

    2013-01-01

    The increased incidence and severity of Clostridium difficile infection, particularly in North America and Europe, have brought renewed focus on the most appropriate method to detect C. difficile and/or its toxins in stools. This prospective study evaluated the usefulness of the Illumigene TM C. difficile assay in diagnostic practice for the detection of toxigenic C. difficile DNA in clinical samples. A total of 88 out of 306 stool samples analysed were positive both by Illumigene and the combination of toxigenic C. difficile culture (TC) and immunochromatographic assay (IC) with a concordance of 100%. Of the 218 samples negative by the combination of TC and IC, 204 were negative also by Illumigene with a concordance of 93.57%. In our experience, compared to conventional assays Illumigene assay proved to be easy to perform, accurate and prompt giving results within 1 hour at a cost of 28 euro per sample. PMID:23435816

  3. Performance Assessment Method for a Forged Fingerprint Detection Algorithm

    NASA Astrophysics Data System (ADS)

    Shin, Yong Nyuo; Jun, In-Kyung; Kim, Hyun; Shin, Woochang

    The threat of invasion of privacy and of the illegal appropriation of information both increase with the expansion of the biometrics service environment to open systems. However, while certificates or smart cards can easily be cancelled and reissued if found to be missing, there is no way to recover the unique biometric information of an individual following a security breach. With the recognition that this threat factor may disrupt the large-scale civil service operations approaching implementation, such as electronic ID cards and e-Government systems, many agencies and vendors around the world continue to develop forged fingerprint detection technology, but no objective performance assessment method has, to date, been reported. Therefore, in this paper, we propose a methodology designed to evaluate the objective performance of the forged fingerprint detection technology that is currently attracting a great deal of attention.

  4. Neutron-detecting apparatuses and methods of fabrication

    SciTech Connect

    Dahal, Rajendra P.; Huang, Jacky Kuan-Chih; Lu, James J. Q.; Danon, Yaron; Bhat, Ishwara B.

    2015-10-06

    Neutron-detecting structures and methods of fabrication are provided which include: a substrate with a plurality of cavities extending into the substrate from a surface; a p-n junction within the substrate and extending, at least in part, in spaced opposing relation to inner cavity walls of the substrate defining the plurality of cavities; and a neutron-responsive material disposed within the plurality of cavities. The neutron-responsive material is responsive to neutrons absorbed for releasing ionization radiation products, and the p-n junction within the substrate spaced in opposing relation to and extending, at least in part, along the inner cavity walls of the substrate reduces leakage current of the neutron-detecting structure.

  5. Methods and systems for detection of ice formation on surfaces

    NASA Technical Reports Server (NTRS)

    Alfano, Robert R. (Inventor); Wang, Wubao (Inventor); Sztul, Henry (Inventor); Budansky, Yury (Inventor)

    2007-01-01

    A system for detecting ice formation on metal, painted metal and other material surfaces can include a transparent window having an exterior surface upon which ice can form; a light source and optics configured and arranged to illuminate the exterior surface of the window from behind the exterior surface; and a detector and optics configured and arranged to receive light backscattered by the exterior surface and any ice disposed on the exterior surface and determine the thickness of the ice layer. For example, the system can be used with aircraft by placing one or more windows in the wings of the aircraft. The system is used for a novel optical method for real-time on-board detection and warning of ice formation on surfaces of airplanes, unmanned aerial vehicles (UAVs), and other vehicles and stationary structures to improve their safety and operation.

  6. Parameters of explosives detection through tagged neutron method

    NASA Astrophysics Data System (ADS)

    Bagdasaryan, Kh. E.; Batyaev, V. F.; Belichenko, S. G.; Bestaev, R. R.; Gavryuchenkov, A. V.; Karetnikov, M. D.

    2015-06-01

    The potentialities of tagged neutron method (TNM) for explosives detection are examined on the basis of an idealized geometrical model. The model includes ING-27 14 MeV neutron generator with a built-in α-detector, a LYSO γ-detector and samples of material to be identified of approximately 0.3 kg each: explosives imitators (trinitrotoluene - TNT, tetryl, RDX and ammonium nitrate), legal materials (sugar, water, silk and polyethylene). The samples were unshielded or shielded by a paper layer of various thicknesses. The experimental data were interpreted by numerical simulation using a Poisson distribution of signals with the statistical parameters defined experimentally. The detection parameters were obtained by a pattern classification theory and a Bayes classifier.

  7. Methods for use in detecting seismic waves in a borehole

    DOEpatents

    West, Phillip B.; Fincke, James R.; Reed, Teddy R.

    2007-02-20

    The invention provides methods and apparatus for detecting seismic waves propagating through a subterranean formation surrounding a borehole. In a first embodiment, a sensor module uses the rotation of bogey wheels to extend and retract a sensor package for selective contact and magnetic coupling to casing lining the borehole. In a second embodiment, a sensor module is magnetically coupled to the casing wall during its travel and dragged therealong while maintaining contact therewith. In a third embodiment, a sensor module is interfaced with the borehole environment to detect seismic waves using coupling through liquid in the borehole. Two or more of the above embodiments may be combined within a single sensor array to provide a resulting seismic survey combining the optimum of the outputs of each embodiment into a single data set.

  8. Single Molecule Detection in Solution: Methods and Applications

    NASA Astrophysics Data System (ADS)

    Zander, Christoph; Enderlein, Jorg; Keller, Richard A.

    2002-07-01

    The detection of single molecules opens up new horizons in analytical chemistry, biology and medicine. This discipline, which belongs to the expanding field of nanoscience, has been rapidly emerging over the last ten years. This handbook provides a thorough overview of the field. It begins with basics of single molecule detection in solution, describes methods and devices (fluorescense correlation spectroscopy, surface enhanced Raman scattering, sensors, especially dyes, screening techniques, especially confocal laser scanning microscopy). In the second part, various applications in life sciences and medicine provide the latest research results. This modern handbook is a highly accessible reference for a broad community from advanced researchers, specialists and company professionals in physics, spectroscopy, biotechnology, analytical chemistry, and medicine. Written by leading authorities in the field, it is timely and fills a gap - up to now there exists no handbook concerning this theme.

  9. Subsurface Cavity Detection by Using Integrated Geophysical Methods

    NASA Astrophysics Data System (ADS)

    Aykaç, Sinem; Rezzan Ozerk, Zeynep; Işıkdeniz Şerifoǧlu, Betül; Bihter Demirci, Büşra; Timur, Emre; Çakir, Korhan

    2016-04-01

    Global warming experienced in recent years in Turkey has led to a severe drought around the Konya Plain in central Anatolia .As a result, excessive amount of ground water was drawn in the region for the sustainability of agricultural activities. So, five small-scale shallow depth sinkholes have occured at different times, at an average interval between 400-450 m. in the study area; Konya-Atlantı. Generally, sinkholes formation occurres among natural processes has turned into disasters caused by humans due to excessive use of groundwater. Consequently, investigations were carried out within a partnership research programme on cavity detection and ground penetration radar, microgravity and multi-frequency electromagnetic methods were jointly utilized. . Exact locations and dimensions of two possible hidden cavities were determined by using these multidisciplinary methods. Keywords: Cavity;Ground-penetrating radar;Konya;Microgravimetry;Multi-frequency electromagnetic method.

  10. Massively parallel sequencing, a new method for detecting adventitious agents.

    PubMed

    Onions, David; Kolman, John

    2010-05-01

    There has been an upsurge of interest in developing new veterinary and human vaccines and, in turn, this has involved the development of new mammalian and insect cell substrates. Excluding adventitious agents from these cells can be problematic, particularly for cells derived from species with limited virological investigation. Massively parallel sequencing is a powerful new method for the identification of viruses and other adventitious agents, without prior knowledge of the nature of the agent. We have developed methods using random priming to detect viruses in the supernatants from cell substrates or in virus seed stocks. Using these methods we have recently discovered a new parvovirus in bovine serum. When applied to sequencing the transcriptome, massively parallel sequencing can reveal latent or silent infections. Enormous amounts of data are developed in this process usually between 100 and 400 Mbp. Consequently, sophisticated bioinformatic algorithms are required to analyse and verify virus targets.

  11. Fire ant-detecting canines: a complementary method in detecting red imported fire ants.

    PubMed

    Lin, Hui-Min; Chi, Wei-Lien; Lin, Chung-Chi; Tseng, Yu-Ching; Chen, Wang-Ting; Kung, Yu-Ling; Lien, Yi-Yang; Chen, Yang-Yuan

    2011-02-01

    In this investigation, detection dogs are trained and used in identifying red imported fire ants, Solenopsis invicta Buren, and their nests. The methodology could assist in reducing the frequency and scope of chemical treatments for red imported fire ant management and thus reduce labor costs and chemical use as well as improve control and quarantine efficiency. Three dogs previously trained for customs quarantine were retrained to detect the scents of red imported fire ants. After passing tests involving different numbers of live red imported fire ants and three other ant species--Crematogaster rogenhoferi Mayr, Paratrechina longicornis Latreille, and Pheidole megacephala F.--placed in containers, ajoint field survey for red imported fire ant nests by detection dogs and bait traps was conducted to demonstrate their use as a supplement to conventional detection methods. The most significant findings in this report are (1) with 10 or more red imported fire ants in scent containers, the dogs had >98% chance in tracing the red imported fire ant. Upon the introduction of other ant species, the dogs still achieved on average, a 93% correct red imported fire ant indication rate. Moreover, the dogs demonstrated great competence in pinpointing emerging and smaller red imported fire ant nests in red imported fire ant-infested areas that had been previously confirmed by bait trap stations. (2) Along with the bait trap method, we also discovered that approximately 90% of red imported fire ants foraged within a distance of 14 m away from their nests. The results prove detection dogs to be most effective for red imported fire ant control in areas that have been previously treated with pesticides and therefore containing a low density of remaining red imported fire ant nests. Furthermore, as a complement to other red imported fire ant monitoring methods, this strategy will significantly increase the efficacy of red imported fire ant control in cases of individual mount treatment.

  12. Two passive microwave prototype methods for hail detection

    NASA Astrophysics Data System (ADS)

    Laviola, Sante; Beauchamp, Jim; Ferraro, Ralph; Levizzani, Vincenzo

    2015-04-01

    During previous decades, relationships between many geophysical variables and the radiometric measurements in the microwave bands were translated into several satellite-based algorithms. Recently, several studies have revealed a high correlation between the occurrence of hail and the microwave brightness temperature depression in convective clouds. In this work, we propose two independent prototype methods for the detection of hail on the basis of the AMSU-B/MHS brightness temperature variation. The first method was developed through the use of collocated satellite and surface hail reports over the continental US for a 10-year period (2000-2009). Compared with the surface observations, the algorithm detects approximately nearly 40% of hail occurrences. The simple threshold algorithms are then used to generate a hail climatology based on all available AMSU observations during 2000-2011 and stratified in several ways, including total hail occurrence on a daily (diurnal cycle), monthly, and total annual basis. The second hail detection algorithm is an improvement of the preexistent MicroWave Cloud Classification (MWCC) method, which exploits the properties of the water vapor channels on board the AMSU-B/MHS to classify the cloud type (stratiform/convection) by estimating the cloud top altitude. Using the results of the MWCC, deep convections were correlated with selected hailstorm events over Europe, South America and the US. The 10-year AMSU-B/MHS observations used for the first method were also employed to refine the algorithm criteria. The hail detector of the MWCC is based on a probabilistic model, which calculates the probability associated with each pixel by following the growth law of the hailstones. The validation results over the US have demonstrated the high correlation between the two methods and the surface hail reports showing a remarkable agreement in terms of POD and FAR. Reference Ferraro, R., Beauchamp J., Cecil D., Heymsfield G., 2014: A prototype

  13. [A hyperspectral subpixel target detection method based on inverse least squares method].

    PubMed

    Li, Qing-Bo; Nie, Xin; Zhang, Guang-Jun

    2009-01-01

    In the present paper, an inverse least square (ILS) method combined with the Mahalanobis distance outlier detection method is discussed to detect the subpixel target from the hyperspectral image. Firstly, the inverse model for the target spectrum and all the pixel spectra was established, in which the accurate target spectrum was obtained previously, and then the SNV algorithm was employed to preprocess each original pixel spectra separately. After the pretreatment, the regressive coefficient of ILS was calculated with partial least square (PLS) algorithm. Each point in the vector of regressive coefficient corresponds to a pixel in the image. The Mahalanobis distance was calculated with each point in the regressive coefficient vector. Because Mahalanobis distance stands for the extent to which samples deviate from the total population, the point with Mahalanobis distance larger than the 3sigma was regarded as the subpixel target. In this algorithm, no other prior information such as representative background spectrum or modeling of background is required, and only the target spectrum is needed. In addition, the result of the detection is insensitive to the complexity of background. This method was applied to AVIRIS remote sensing data. For this simulation experiment, AVIRIS remote sensing data was free downloaded from the NASA official websit, the spectrum of a ground object in the AVIRIS hyperspectral image was picked up as the target spectrum, and the subpixel target was simulated though a linear mixed method. The comparison of the subpixel detection result of the method mentioned above with that of orthogonal subspace projection method (OSP) was performed. The result shows that the performance of the ILS method is better than the traditional OSP method. The ROC (receive operating characteristic curve) and SNR were calculated, which indicates that the ILS method possesses higher detection accuracy and less computing time than the OSP algorithm. PMID:19385196

  14. Time reversal acousto-seismic method for land mine detection

    NASA Astrophysics Data System (ADS)

    Sutin, Alexander; Johnson, Paul; TenCate, James; Sarvazyan, Armen

    2005-06-01

    We present the general concept and results of a pilot study on land mine detection based on the application of Time Reverse Acoustics (TRA). Applying TRA is extremely effective at focusing seismic waves in time and space, significantly improving detection capabilities using both linear and nonlinear wave methods. The feasibility of the system was explored in the laboratory and in small scale field experiments. The system included a multi-channel TRA electronic unit developed at Artann, five speakers for seismic-wave excitation and noncontact (laser vibrometer) or contact (accelerometer) devices for measurements of the surface vibration. Experiments demonstrated the high focusing ability of the TRA system. We observed excitation of highly focused seismic waves in an area with dimensions of the order of one wavelength. In the presence of a buried mock mine, the method led to an increase in the surface vibration amplitude and to significant nonlinear distortion of the TRA focused signal. Localization via TRA depends on the frequency of excitation, the depth of the buried mine, and the form and size of a mine mock. The nonlinear acoustic effect-higher harmonic generation-provides higher contrast for the mock-mine signal-response than for the surrounding medium. We also successfully tested an inversion method of the nonlinear TRA measurements earlier developed for medical ultrasound applications.

  15. Current and Prospective Methods for Plant Disease Detection

    PubMed Central

    Fang, Yi; Ramasamy, Ramaraja P.

    2015-01-01

    Food losses due to crop infections from pathogens such as bacteria, viruses and fungi are persistent issues in agriculture for centuries across the globe. In order to minimize the disease induced damage in crops during growth, harvest and postharvest processing, as well as to maximize productivity and ensure agricultural sustainability, advanced disease detection and prevention in crops are imperative. This paper reviews the direct and indirect disease identification methods currently used in agriculture. Laboratory-based techniques such as polymerase chain reaction (PCR), immunofluorescence (IF), fluorescence in-situ hybridization (FISH), enzyme-linked immunosorbent assay (ELISA), flow cytometry (FCM) and gas chromatography-mass spectrometry (GC-MS) are some of the direct detection methods. Indirect methods include thermography, fluorescence imaging and hyperspectral techniques. Finally, the review also provides a comprehensive overview of biosensors based on highly selective bio-recognition elements such as enzyme, antibody, DNA/RNA and bacteriophage as a new tool for the early identification of crop diseases. PMID:26287253

  16. Evaluation of recovery methods to detect coliforms in water.

    PubMed

    Bissonnette, G K; Jezeski, J J; McFeters, G A; Stuart, D G

    1977-03-01

    Various recovery methods used to detect coliforms in water were evaluated by applying the membrane filter chamber technique. The membrane filter chambers, containing pure-culture suspensions of Escherichia coli or natural suspensions of raw sewage, were immersed in the stream environment. Samples were withdrawn from the chamber at regular time intervals and enumerated by several detection methods. In general, multiple-tube fermentation techniques gave better recovery than plating or membrane filtration procedures. The least efficient method of recovery resulted when using membrane filtration procedures, especially as the exposure period of the organisms to the stream environment increased. A 2-h enrichment on a rich, nonselective medium before exposure to selective media improved the recovery of fecal coliforms with membrane filtration techniques. Substantially enhanced recoveries of E. coli from pure-culture suspensions and of fecal coliforms from raw-sewage suspensions were observed when compared with recoveries obtained by direct primary exposure to selective media. Such an enrichment period appears to provide a nontoxic environment for the gradual adjustment and repair of injured cells.

  17. Conventional, molecular methods and biomarkers molecules in detection of septicemia

    PubMed Central

    Arabestani, Mohammad Reza; Rastiany, Sahar; Kazemi, Sima; Mousavi, Seyed Masoud

    2015-01-01

    Sepsis is a leading cause of morbidity and mortality in hospitalized patients worldwide and based on studies, 30–40% of all cases of severe sepsis and septic shock results from the blood stream infections (BSIs). Identifying of the disease, performing laboratory tests, and consequently treatment are factors that required for optimum management of BSIs. In addition, applying precise and immediate identification of the etiologic agent is a prerequisite for specific antibiotic therapy of pathogen and thereby decreasing mortality rates. The diagnosis of sepsis is difficult because clinical signs of sepsis often overlap with other noninfectious cases of systemic inflammation. BSIs are usually diagnosed by performing a series of techniques such as blood cultures, polymerase chain reaction-based methods, and biomarkers of sepsis. Extremely time-consuming even to take up to several days is a major limitation of conventional methods. In addition, yielding false-negative results due to fastidious and slow-growing microorganisms and also in case of antibiotic pretreated samples are other limitations. In comparison, molecular methods are capable of examining a blood sample obtained from suspicious patient with BSI and gave the all required information to prescribing antimicrobial therapy for detected bacterial or fungal infections immediately. Because of an emergency of sepsis, new methods are being developed. In this review, we discussed about the most important sepsis diagnostic methods and numbered the advantage and disadvantage of the methods in detail. PMID:26261822

  18. Method for Real-Time Model Based Structural Anomaly Detection

    NASA Technical Reports Server (NTRS)

    Smith, Timothy A. (Inventor); Urnes, James M., Sr. (Inventor); Reichenbach, Eric Y. (Inventor)

    2015-01-01

    A system and methods for real-time model based vehicle structural anomaly detection are disclosed. A real-time measurement corresponding to a location on a vehicle structure during an operation of the vehicle is received, and the real-time measurement is compared to expected operation data for the location to provide a modeling error signal. A statistical significance of the modeling error signal to provide an error significance is calculated, and a persistence of the error significance is determined. A structural anomaly is indicated, if the persistence exceeds a persistence threshold value.

  19. Detecting plastic strain distribution by a nonlinear wave mixing method

    NASA Astrophysics Data System (ADS)

    Tang, Guangxin; Liu, Minghe; Jacobs, Laurence J.; Qu, Jianmin

    2013-01-01

    A nonlinear wave mixing method is used to measure the plastic strain distribution in polycrystalline materials. A pair of collinear longitudinal and shear waves is generated. Under the phase matching condition, a resonant shear wave with a difference frequency is generated and propagates towards the shear wave transducer. The amplitude of this resonant shear wave is proportional to the acoustic nonlinearity parameter β, which is known to be related to plastic deformation. By adjusting the two primary waves so that they mix at different locations, the distribution of β can be obtained. This study demonstrates the feasibility of detecting plastic strain distribution in polycrystalline materials by the nonlinear wave mixing technique.

  20. Method for detecting pollutants. [through chemical reactions and heat treatment

    NASA Technical Reports Server (NTRS)

    Rogowski, R. S.; Richards, R. R.; Conway, E. J. (Inventor)

    1976-01-01

    A method is described for detecting and measuring trace amounts of pollutants of the group consisting of ozone, nitrogen dioxide, and carbon monoxide in a gaseous environment. A sample organic solid material that will undergo a chemical reaction with the test pollutant is exposed to the test environment and thereafter, when heated in the temperature range of 100-200 C., undergoes chemiluminescence that is measured and recorded as a function of concentration of the test pollutant. The chemiluminescence of the solid organic material is specific to the pollutant being tested.

  1. Method for detecting engine misfire and for fuel control

    SciTech Connect

    Tang, D.L.; Chang, M.F.; Sultan, M.C.

    1990-06-12

    This patent describes the method of detecting misfire in an internal combustion engine during start up. It comprises: sensing first engine speeds at positions midway between top dead center positions and second engine speeds at positions between each midway position and the previous top dead center position, during initial cranking, storing first speeds as cranking speed, and comparing the first speed with the second speed during the combustion period of each cylinder and with the cranking speed.A failure to increase speed over the cranking speed and over the second speed denotes misfire for that cylinder.

  2. Method For Detecting The Presence Of A Ferromagnetic Object

    DOEpatents

    Roybal, Lyle G.

    2000-11-21

    A method for detecting a presence or an absence of a ferromagnetic object within a sensing area may comprise the steps of sensing, during a sample time, a magnetic field adjacent the sensing area; producing surveillance data representative of the sensed magnetic field; determining an absolute value difference between a maximum datum and a minimum datum comprising the surveillance data; and determining whether the absolute value difference has a positive or negative sign. The absolute value difference and the corresponding positive or negative sign thereof forms a representative surveillance datum that is indicative of the presence or absence in the sensing area of the ferromagnetic material.

  3. Synchronous scanning luminescence: methods to detect pesticides and explosives

    NASA Astrophysics Data System (ADS)

    Hyfantis, George J., Jr.; Teglas, Matthew S.; Finnegan, Timothy P.; Mulligan, Patrick J.; Watts, Wendi

    1999-12-01

    The Synchronous Scanning Luminoscope (SSL) is a field- portable, synchronous luminescence spectrofluorometer that was developed for on-site analysis of contaminated soil and ground water. The SSL is capable of quantitative analysis of pesticides and explosives using phosphorescence and fluorescence techniques with a high correlation to laboratory data as illustrated by these studies. These techniques allow for rapid field assessments for pesticides and explosives. The Luminoscope is capable of detecting pesticides and explosives to the parts per billion (ppb) range. This paper describes standard field methods for using the SSL and describes the results of field/laboratory testing of explosives and pesticides.

  4. Comparison of Event Detection Methods for Centralized Sensor Networks

    NASA Technical Reports Server (NTRS)

    Sauvageon, Julien; Agogiono, Alice M.; Farhang, Ali; Tumer, Irem Y.

    2006-01-01

    The development of an Integrated Vehicle Health Management (IVHM) for space vehicles has become a great concern. Smart Sensor Networks is one of the promising technologies that are catching a lot of attention. In this paper, we propose to a qualitative comparison of several local event (hot spot) detection algorithms in centralized redundant sensor networks. The algorithms are compared regarding their ability to locate and evaluate the event under noise and sensor failures. The purpose of this study is to check if the ratio performance/computational power of the Mote Fuzzy Validation and Fusion algorithm is relevant compare to simpler methods.

  5. Radioisotope Detection Device and Methods of Radioisotope Collection

    DOEpatents

    Tranter, Troy J.; Oertel, Christopher P.; Giles, John R.; Mann, Nicholas R.; McIlwain, Michael E.

    2011-04-12

    A device for collection of radionuclides includes a mixture of a polymer, a fluorescent organic scintillator and a chemical extractant. A radionuclide detector system includes a collection device comprising a mixture of a polymer, a fluorescent agent and a selective ligand. The system includes at least one photomultiplier tube (PMT). A method of detecting radionuclides includes providing a collector device comprising a mixture comprising a polymer, a fluorescent organic scintillator and a chemical extractant. An aqueous environment is exposed to the device and radionuclides are collected from the environment. Radionuclides can be concentrated within the device.

  6. Detection methods for atoms and radicals in the gas phase

    NASA Astrophysics Data System (ADS)

    Hack, W.

    This report lists atoms and free radicals in the gas phase which are of interest for environmental and flame chemistry and have been detected directly. The detection methods which have been used are discussed with respect to their range of application, specificity and sensitivity. In table 1, detection methods for the five atoms of group IV (C, Si, Ge, Sn, Pb) and about 60 radicals containing at least one atom of group IV are summarized (CH, Cd, Cf, CC1, CBr, Cn, Cs, CSe, CH2, CD2, Chf, Cdf, CHC1, CHBr, CF2, CC12, CBr2, CFC1, CFBr, CH3, CD3, CF3, CH2F, CH2C1, CH2Br, CHF2, CHC12, CHBr2, Hco, Fco, CH30, CD30, CH2OH, CH3S, Nco, CH4N, CH302, CF302; C2, C2N, C2H, C20, C2HO, C2H3, C2F3, C2H5, C2HsO, C2H4OH, CH3CO, CD3CO, C2H3O, C2H502, CH3COO2, C2H4N, C2H6N, C3; Si, SiF, SiF2, SiO, SiC, Si2; Ge, GeC, GeO, GeF, GeF2, GeCl2, Sn, SnF, SnO, SnF2, Pb, PbF, PbF2, PbO, PbS). In table 2 detection methods for about 25 other atoms and 60 radicals are listed: (H, D, O, O2, Oh, Od, HO2, DO2, F, Ci, Br, I, Fo, Cio, BrO, Io, FO2, C1O2, Li, Na, K, Rb, Cs, N, N3, Nh, Nd, Nf, Nci, NBr, NH2, ND2, Nhd, Nhf, NF2, NC12, N2H3, No, NO2, NO3, Hno, Dno, P, Ph, Pd, Pf, Pci, PH2, PD2, PF2, Po, As, AsO, AsS, Sb, Bi, S, S2, Sh, Sd, Sf, SF2, So, Hso, Dso, Sn, Se, Te, Se2, SeH, SeD, SeF, SeO, SeS, SeN, TeH, TeO, Bh, BH2, Bo, Bn, B02, Cd, Hg, UF5). The tables also cite some recent kinetic applications of the various methods.

  7. Methods and systems for detecting abnormal digital traffic

    DOEpatents

    Goranson, Craig A [Kennewick, WA; Burnette, John R [Kennewick, WA

    2011-03-22

    Aspects of the present invention encompass methods and systems for detecting abnormal digital traffic by assigning characterizations of network behaviors according to knowledge nodes and calculating a confidence value based on the characterizations from at least one knowledge node and on weighting factors associated with the knowledge nodes. The knowledge nodes include a characterization model based on prior network information. At least one of the knowledge nodes should not be based on fixed thresholds or signatures. The confidence value includes a quantification of the degree of confidence that the network behaviors constitute abnormal network traffic.

  8. Detection and characterisation of anthropogenic pieces by magnetic method

    NASA Astrophysics Data System (ADS)

    Nodot, Emilie; Munschy, Marc; Benevent, Pierre

    2013-04-01

    Human activities have let many anthropogenic objects buried under our feet. Some of these like explosive devices left after the World Wars turn out to be a threat to safety or environment. Others must be perfectly localised in case of construction work, for example gas pipe. Geophysics and more specifically magnetic cartography (many of these items are magnetic) can obviously help to locate them. We already use this method on daily basis to detect UXO (unexploded ordnance) but less than 10% of the unearthed objects are actually bombs or shells. Detection and mostly characterisation methods must be improved in order to reduce this proportion. On the field there are a few things we can do to increase data qualities. Characterisation may be improved by multiple scale prospections. We search a large area with our usual and rather fast method then we achieve high definition cartographies of small interesting areas (upon the object to characterise). In the case of measurements in an urban environment for example, data are distorted. The traffic (train, tramway, cars…) produces temporal variations of the magnetic field. This effect can be lessened, sometimes even removed by the use of a fixed scalar magnetic sensor. Data treatment is another key as regards the characterisation. Tools such as analytic signal or derivative are frequently used at the first degree. We will see that in a synthetic case the second and third degree bring even more information. A new issue appeared recently about pipes. Can we localise very precisely (less than 10 cm uncertainty) a gas pipe? Horizontally we can but due to our inversion method we still have troubles with the depth accuracy. Our final concern is about the amplitude of some anomalies. Potential methods equations are based on the fact that the anomaly norm must be minor to magnetic field norm. Sometimes this is not the case but vector magnetometry is a lead to solve this problem.

  9. A simple "add and measure" FRET-based telomeric tandem repeat sequence detection and telomerase assay method.

    PubMed

    Kawamura, Koji; Yaku, Hidenobu; Miyoshi, Daisuke; Murashima, Takashi

    2014-02-14

    A simple and sensitive method for measuring telomeric tandem repeat DNA and telomerase activity based on fluorescence resonance energy transfer (FRET) with a FAM-modified 12-mer ODN probe as a donor (fluorophore) and ethidium bromide (EB) as an acceptor (quencher) is proposed. When telomeric DNA and the FAM-modified probe form a duplex, EB intercalates between base-pairs, resulting in fluorescence quenching of FAM through FRET from FAM to EB. This method can be used to estimate the amount of telomeric DNAs in a sample solution as the molar concentration of the telomeric DNA unit [5'-(TTA GGG TTA GGG)-3']. A linear fluorescence quenching ratio was obtained in 5-1000 pM of telomeric DNA units by adjusting the amount of FAM-modified probe. A PCR-free telomerase activity assay using this FRET-based method could be applied to ≥400 HeLa cells per μL. This assay represents a novel technique for initial screenings of cancer diagnosis and is a facile method for quantifying telomeric DNA or other tandem repeat sequences. PMID:24362853

  10. Optimization of Quantitative PCR Methods for Enteropathogen Detection.

    PubMed

    Liu, Jie; Gratz, Jean; Amour, Caroline; Nshama, Rosemary; Walongo, Thomas; Maro, Athanasia; Mduma, Esto; Platts-Mills, James; Boisen, Nadia; Nataro, James; Haverstick, Doris M; Kabir, Furqan; Lertsethtakarn, Paphavee; Silapong, Sasikorn; Jeamwattanalert, Pimmada; Bodhidatta, Ladaporn; Mason, Carl; Begum, Sharmin; Haque, Rashidul; Praharaj, Ira; Kang, Gagandeep; Houpt, Eric R

    2016-01-01

    Detection and quantification of enteropathogens in stool specimens is useful for diagnosing the cause of diarrhea but is technically challenging. Here we evaluate several important determinants of quantification: specimen collection, nucleic acid extraction, and extraction and amplification efficiency. First, we evaluate the molecular detection and quantification of pathogens in rectal swabs versus stool, using paired flocked rectal swabs and whole stool collected from 129 children hospitalized with diarrhea in Tanzania. Swabs generally yielded a higher quantification cycle (Cq) (average 29.7, standard deviation 3.5 vs. 25.3 ± 2.9 from stool, P<0.001) but were still able to detect 80% of pathogens with a Cq < 30 in stool. Second, a simplified total nucleic acid (TNA) extraction procedure was compared to separate DNA and RNA extractions and showed 92% (318/344) sensitivity and 98% (951/968) specificity, with no difference in Cq value for the positive results (ΔCq(DNA+RNA-TNA) = -0.01 ± 1.17, P = 0.972, N = 318). Third, we devised a quantification scheme that adjusts pathogen quantity to the specimen's extraction and amplification efficiency, and show that this better estimates the quantity of spiked specimens than the raw target Cq. In sum, these methods for enteropathogen quantification, stool sample collection, and nucleic acid extraction will be useful for laboratories studying enteric disease. PMID:27336160

  11. Optimization of Quantitative PCR Methods for Enteropathogen Detection

    PubMed Central

    Liu, Jie; Gratz, Jean; Amour, Caroline; Nshama, Rosemary; Walongo, Thomas; Maro, Athanasia; Mduma, Esto; Platts-Mills, James; Boisen, Nadia; Nataro, James; Haverstick, Doris M.; Kabir, Furqan; Lertsethtakarn, Paphavee; Silapong, Sasikorn; Jeamwattanalert, Pimmada; Bodhidatta, Ladaporn; Mason, Carl; Begum, Sharmin; Haque, Rashidul; Praharaj, Ira; Kang, Gagandeep; Houpt, Eric R.

    2016-01-01

    Detection and quantification of enteropathogens in stool specimens is useful for diagnosing the cause of diarrhea but is technically challenging. Here we evaluate several important determinants of quantification: specimen collection, nucleic acid extraction, and extraction and amplification efficiency. First, we evaluate the molecular detection and quantification of pathogens in rectal swabs versus stool, using paired flocked rectal swabs and whole stool collected from 129 children hospitalized with diarrhea in Tanzania. Swabs generally yielded a higher quantification cycle (Cq) (average 29.7, standard deviation 3.5 vs. 25.3 ± 2.9 from stool, P<0.001) but were still able to detect 80% of pathogens with a Cq < 30 in stool. Second, a simplified total nucleic acid (TNA) extraction procedure was compared to separate DNA and RNA extractions and showed 92% (318/344) sensitivity and 98% (951/968) specificity, with no difference in Cq value for the positive results (ΔCq(DNA+RNA-TNA) = -0.01 ± 1.17, P = 0.972, N = 318). Third, we devised a quantification scheme that adjusts pathogen quantity to the specimen’s extraction and amplification efficiency, and show that this better estimates the quantity of spiked specimens than the raw target Cq. In sum, these methods for enteropathogen quantification, stool sample collection, and nucleic acid extraction will be useful for laboratories studying enteric disease. PMID:27336160

  12. AC methods for detection and monitoring of crevice corrosion

    NASA Astrophysics Data System (ADS)

    Rawat, Ashwani Kumar

    Crevice corrosion represents one of the most deleterious forms of localized corrosion which can lead to unpredicted catastrophic failures of structural and engineering components. Crevice corrosion is typically encountered in metals and alloys which exhibit a passive behavior (e.g. stainless steels, aluminum and aluminum alloys, nickel base alloys, and titanium and titanium base alloys) in electrolytic solutions. Due to the extensive application of these metals and alloys in chemical, petrochemical, marine environments, and power industries, crevice corrosion has been a subject of intense investigation in the past two decades. Most of the studies have focused on understanding the mechanism of crevice corrosion and the control measures for specific engineering structures. However, there are few, if any, commercially available methods for the detection of initiation or monitoring of crevice corrosion propagation. This is due to the fact that crevice corrosion often takes place in shielded areas of metal/alloy surfaces which are optically inaccessible and the visual examination of the metal in crevice is extremely difficult. Most of the research efforts in this area have been directed towards comparative evaluation of crevice corrosion resistance of different alloys in a variety of electrolytes. In order to detect initiation and monitor the propagation rate of crevice corrosion in highly passivated alloys, an innovative, non-destructive, in situ research methodology based on the use of Electrochemical Impedance Spectroscopy (EIS) has been developed. This research technique is based on the fact that (i) crevice corroding sites possess lower interfacial impedance compared to the passivated surfaces (ii) the crevice has a very high solution resistance, resulting in an extremely high iR drop from the crevice to the bulk solution (iii) placement of the probing electrodes (e.g. Counter Electrode and Reference Electrode) directly inside the crevice environment drastically

  13. The Radial Velocity Method for the Detection of Exoplanets

    NASA Astrophysics Data System (ADS)

    Hatzes, Artie P.

    The radial velocity (RV) method has provided the foundation for the research field of exoplanets. It created the field by discovering the first exoplanets and then blazed a trail by detecting over 1000 exoplanets in orbit around other stars. The method also plays a vital role in transit searches by providing the planetary mass needed to calculate the bulk density of the exoplanet. The RV method requires a wide range of techniques: novel instrumentation for making precise RV measurements, clever techniques for extracting the periodic signals due to planets from the RV data, tools for assessing their statistical significance, and programs for calculating the Keplerian orbital parameters. Finally, RV measurements have become so precise that the measurement error is now dominated by the intrinsic stellar noise. New tools have to be developed to extract planetary signals from RV variability originating from the star. In these series of lectures I will cover (1) basic instrumentation for stellar radial velocity methods, (2) methods for achieving high radial velocity precision, (3) finding periodic signals in radial velocity data, (4) Keplerian orbits, (5) sources of errors for radial velocity measurements, and (6) dealing with the contribution of stellar noise to the radial velocity measurement.

  14. Novel method for detection of Sleep Apnoea using respiration signals.

    PubMed

    Carmes, Kristine; Kempfner, Lykke; Sorensen, Helge Bjarup Dissing; Jennum, Poul

    2014-01-01

    Polysomnography (PSG) studies are considered the "gold standard" for the diagnosis of Sleep Apnoea (SA). Identifying cessations of breathing from long-lasting PSG recordings manually is a labour-intensive and time-consuming task for sleep specialist, associated with inter-scorer variability. In this study a simplified, semi-automatic, three-channel method for detection of SA patients is proposed in order to increase analysis reliability and diagnostic accuracy in the clinic. The method is based on characteristic features, such as respiration stoppages pr. hour and the total number of oxygen desaturations > 3%, extracted from the thorax and abdomen respiration effort belts, and the oxyhemoglobin saturation (SaO2), fed to an Elastic Net classifier and validated according to American Academy of Sleep Medicine (AASM) using the patients' AHI value. The method was applied to 109 patient recordings and resulted in a very high SA classification with accuracy of 97.9%. The proposed method reduce the time spent on manual analysis of respiration stoppages and the inter- and intra-scorer variability, and may serve as an alternative screening method for SA. PMID:25569946

  15. On-line tool misalignment detection using an imaging method

    NASA Astrophysics Data System (ADS)

    Xie, Tong

    The Opticam spherical surface generator is developed at the Center for Optics Manufacturing (COM). It combines computer-numerical-control (CNC) technology with bound abrasive ring grinding geometry to create advantages over the conventional loose abrasive grinding systems in flexibility, productivity and accuracy. The Opticam SX utilizes a ring grinding geometry to generate spherical surfaces. By adjusting the tilt angle and the diameter of the ring cutter, the Opticam is capable of generating spherical surfaces with an essentially unlimited range of radius of curvature. This ring grinding geometry, however, requires a precise alignment between the cutter and the generated part. Residual cutter misalignments in the machine setup cause the finished surface to deviate from the design shape. Current tool misalignment detection techniques seriously limit the productivity of the Opticam system, and a new metrology system is introduced in this dissertation. The new system is geometrical ray trace based, and has some similarities to the moire deflectometry techniques. It uses a non-contact method to measure surface slope errors from images reflected off Opticam generated surfaces. The detected slope errors are used to determine the corresponding tool misalignments in the Opticam generator. The system setup is simple and not sensitive to vibrations. This system is compatible with the wet grinding environment. Furthermore, this new metrology system is capable of measuring surfaces with a wide range of radius of curvature from convex to concave. A prototype system was built based on this technique. It has been evaluated on-line in the Opticam SX. A surface wetting technique is used to allow detection on Opticam generated surfaces independent of the actual surface finish. The experimental results suggested that the on- line detection system is capable of detecting tool misalignment corresponding to a peak-to-valley surface figure error that is 1 μm or greater on ground

  16. An efficient method for facial component detection in thermal images

    NASA Astrophysics Data System (ADS)

    Paul, Michael; Blanik, Nikolai; Blazek, Vladimir; Leonhardt, Steffen

    2015-04-01

    A method to detect certain regions in thermal images of human faces is presented. In this approach, the following steps are necessary to locate the periorbital and the nose regions: First, the face is segmented from the background by thresholding and morphological filtering. Subsequently, a search region within the face, around its center of mass, is evaluated. Automatically computed temperature thresholds are used per subject and image or image sequence to generate binary images, in which the periorbital regions are located by integral projections. Then, the located positions are used to approximate the nose position. It is possible to track features in the located regions. Therefore, these regions are interesting for different applications like human-machine interaction, biometrics and biomedical imaging. The method is easy to implement and does not rely on any training images or templates. Furthermore, the approach saves processing resources due to simple computations and restricted search regions.

  17. Methods and apparatus for rotor blade ice detection

    DOEpatents

    LeMieux, David Lawrence

    2006-08-08

    A method for detecting ice on a wind turbine having a rotor and one or more rotor blades each having blade roots includes monitoring meteorological conditions relating to icing conditions and monitoring one or more physical characteristics of the wind turbine in operation that vary in accordance with at least one of the mass of the one or more rotor blades or a mass imbalance between the rotor blades. The method also includes using the one or more monitored physical characteristics to determine whether a blade mass anomaly exists, determining whether the monitored meteorological conditions are consistent with blade icing; and signaling an icing-related blade mass anomaly when a blade mass anomaly is determined to exist and the monitored meteorological conditions are determined to be consistent with icing.

  18. Methods for detecting and correcting for population stratification.

    PubMed

    Edwards, Todd L; Gao, Xiaoyi

    2012-04-01

    Population stratification (PS) is a primary consideration in studies of the genetic determinants of human traits. Failure to control for it may lead to confounding, causing a study to fail for lack of significant results or resources to be wasted following false-positive signals. Here we review historical and current approaches for addressing PS when performing genetic association studies in human populations. We describe methods for detecting the presence of PS including global and local ancestry methods. We also describe approaches for accounting for PS when calculating association statistics, such that measures of association are not confounded. This is particularly important since many traits are being examined in minority populations, populations that may inherently feature PS.

  19. NON-DESTRUCTIVE METHOD AND MEANS FOR FLAW DETECTION

    DOEpatents

    Hochschild, R.

    1959-03-10

    BS>An improved method is presented for the nondestructive detection of flaws in olectrictilly conductivc articles using magnetic field. According to thc method a homogoneous mignetic field is established in the test article;it right angle" to the artyicle. A probe is aligned with its axis transverse to the translates so hat th4 probe scans the surface of the test article while the axis of the robe is transverse to the direction of translation of the article. In this manner any output current obtained in thc probe is an indication of the size and location of a flaw in the article under test, with a miiiimum of signal pick- up in the probe from the established magnetic field.

  20. A Foreign Object Detection Method for Turbine Safety and Reliability

    SciTech Connect

    Allison, Stephen W; Cates, Michael R; Hollerman, William Andrew

    2008-01-01

    A method for detecting blade impacts by foreign object debris (FOD) is described. The rationale derives from the knowledge that FOD is a major source for cost and maintenance penalty as it removes engines from service.1 The method exploits a property of some materials and coatings known as triboluminescence. Triboluminescence is light emission that results when a substance is impacted or fractured.2-4 The goal of this new approach is to accomplish a means of quantifying the received, accumulated flux of incident objects and their energies in order to assess the health of the impacted surface and aid intelligent decisions for maintenance. To effect an impact diagnostic, an amorphous coating of a triboluminescent material is applied to the surface of interest. When a foreign object impacts this surface, the characteristics of the resulting emission will contain information regarding the incident projectile. Some testing in NASA facilities at > 5km/s has indicated the potential for space debris and micrometeorite detection.4 This paper outlines a number of issues that need to be explored in route to a successful implementation for FOD applications.

  1. System and method for detection of dispersed broadband signals

    DOEpatents

    Qian, Shie; Dunham, Mark E.

    1999-06-08

    A system and method for detecting the presence of dispersed broadband signals in real time. The present invention utilizes a bank of matched filters for detecting the received dispersed broadband signals. Each matched filter uses a respective robust time template that has been designed to approximate the dispersed broadband signals of interest, and each time template varies across a spectrum of possible dispersed broadband signal time templates. The received dispersed broadband signal x(t) is received by each of the matched filters, and if one or more matches occurs, then the received data is determined to have signal data of interest. This signal data can then be analyzed and/or transmitted to Earth for analysis, as desired. The system and method of the present invention will prove extremely useful in many fields, including satellite communications, plasma physics, and interstellar research. The varying time templates used in the bank of matched filters are determined as follows. The robust time domain template is assumed to take the form w(t)=A(t)cos{2.phi.(t)}. Since the instantaneous frequency f(t) is known to be equal to the derivative of the phase .phi.(t), the trajectory of a joint time-frequency representation of x(t) is used as an approximation of .phi.'(t).

  2. System and method for detection of dispersed broadband signals

    DOEpatents

    Qian, S.; Dunham, M.E.

    1999-06-08

    A system and method for detecting the presence of dispersed broadband signals in real time are disclosed. The present invention utilizes a bank of matched filters for detecting the received dispersed broadband signals. Each matched filter uses a respective robust time template that has been designed to approximate the dispersed broadband signals of interest, and each time template varies across a spectrum of possible dispersed broadband signal time templates. The received dispersed broadband signal x(t) is received by each of the matched filters, and if one or more matches occurs, then the received data is determined to have signal data of interest. This signal data can then be analyzed and/or transmitted to Earth for analysis, as desired. The system and method of the present invention will prove extremely useful in many fields, including satellite communications, plasma physics, and interstellar research. The varying time templates used in the bank of matched filters are determined as follows. The robust time domain template is assumed to take the form w(t)=A(t)cos[l brace]2[phi](t)[r brace]. Since the instantaneous frequency f(t) is known to be equal to the derivative of the phase [phi](t), the trajectory of a joint time-frequency representation of x(t) is used as an approximation of [phi][prime](t). 10 figs.

  3. Detection of urinary tract infections by rapid methods.

    PubMed Central

    Pezzlo, M

    1988-01-01

    A review of rapid urine screens for detection of bacteriuria and pyuria demonstrates a number of available alternatives to the culture method. Selection of one or more of these systems for routine use is dependent upon the laboratory and the patient population being tested. The laboratory approach to the diagnosis of urinary tract infection should consider the clinical diagnosis of the patient whenever possible. Keeping in mind that quantitative urine cultures alone cannot be used to detect infection in some patient populations unless lower colony counts are considered, a rapid screen may be a more practical approach. It has become accepted that 10(5) CFU/ml can no longer be used as the standard for all patient groups, that pyuria often is important in making the diagnosis of a urinary tract infection, and that most of the rapid screens are more sensitive than the culture method at 10(5) CFU/ml. Presently, no one approach can be recommended for all laboratories and all patient groups. However, each diagnostic laboratory should select one approach which is best for its situation. It is not practical, efficient, or cost effective to define a protocol for each possible clinical condition; however, all should be considered when developing a protocol. This protocol should be compatible with the patient population and communicated to the physicians. Use of a rapid screen should be beneficial to the patient, the physician, and the laboratory. PMID:3058296

  4. Artificial Intelligence Methods Applied to Parameter Detection of Atrial Fibrillation

    NASA Astrophysics Data System (ADS)

    Arotaritei, D.; Rotariu, C.

    2015-09-01

    In this paper we present a novel method to develop an atrial fibrillation (AF) based on statistical descriptors and hybrid neuro-fuzzy and crisp system. The inference of system produce rules of type if-then-else that care extracted to construct a binary decision system: normal of atrial fibrillation. We use TPR (Turning Point Ratio), SE (Shannon Entropy) and RMSSD (Root Mean Square of Successive Differences) along with a new descriptor, Teager- Kaiser energy, in order to improve the accuracy of detection. The descriptors are calculated over a sliding window that produce very large number of vectors (massive dataset) used by classifier. The length of window is a crisp descriptor meanwhile the rest of descriptors are interval-valued type. The parameters of hybrid system are adapted using Genetic Algorithm (GA) algorithm with fitness single objective target: highest values for sensibility and sensitivity. The rules are extracted and they are part of the decision system. The proposed method was tested using the Physionet MIT-BIH Atrial Fibrillation Database and the experimental results revealed a good accuracy of AF detection in terms of sensitivity and specificity (above 90%).

  5. A computational method for reliable gait event detection and abnormality detection for feedback in rehabilitation.

    PubMed

    Senanayake, Chathuri; Senanayake, S M N Arosha

    2011-10-01

    In this paper, a gait event detection algorithm is presented that uses computer intelligence (fuzzy logic) to identify seven gait phases in walking gait. Two inertial measurement units and four force-sensitive resistors were used to obtain knee angle and foot pressure patterns, respectively. Fuzzy logic is used to address the complexity in distinguishing gait phases based on discrete events. A novel application of the seven-dimensional vector analysis method to estimate the amount of abnormalities detected was also investigated based on the two gait parameters. Experiments were carried out to validate the application of the two proposed algorithms to provide accurate feedback in rehabilitation. The algorithm responses were tested for two cases, normal and abnormal gait. The large amount of data required for reliable gait-phase detection necessitate the utilisation of computer methods to store and manage the data. Therefore, a database management system and an interactive graphical user interface were developed for the utilisation of the overall system in a clinical environment.

  6. Detection of sarcocystis parasites in retail beef: a regional survey combining histological and genetic detection methods.

    PubMed

    Pritt, Bobbi; Trainer, Thomas; Simmons-Arnold, Linda; Evans, Mark; Dunams, Detiger; Rosenthal, Benjamin M

    2008-10-01

    Sarcocystis spp. are parasitic protists acquired when undercooked, cyst-laden meat is consumed. While both Sarcocystis hominis and S. cruzi encyst in beef, only S. hominis is pathogenic to humans. In this study, we used histological methods and novel molecular techniques to determine the regional prevalence and identity of Sarcocystis spp. in retail beef. Of 110 samples, 60 supported amplification of parasite rRNA by PCR. All 41 sequenced representatives were identified as S. cruzi. To compare detection methods, 48 samples were then examined in parallel by histology and PCR, and 16 and 26 samples, respectively, were positive. Five samples positive by initial histologic sections were not amplified by PCR. Fifteen PCR-positive samples did not contain sarcocysts on initial histologic section, but additional sections from these samples revealed sarcocysts in an additional 12 samples. When combined, histology with additional sections and PCR detected 31 positive specimens of the 48 total specimens. We found no evidence of human pathogen S. hominis and confirm that cattle pathogen S. cruzi is highly prevalent in this regional sample. PCR assays may increase the detection sensitivity of Sarcocystis spp. and contribute diagnostic precision.

  7. Electrometrical Methods Application for Detection of Heating System Pipeline Corrosion

    NASA Astrophysics Data System (ADS)

    Vetrov, A.; Ilyin, Y.; Isaev, V.; Rondel, A.; Shapovalov, N.

    2004-12-01

    Coated steel underground pipelines are widely used for the petroleum and gaze transportation, for the water and heat supply. The soils, where the pipelines are placed, are usually highly corrosive for pipe's metal. In the places of crippling of external coating the corrosion processes begin, and this can provoke a pipe breakage. To ensure the pipeline survivability it is necessary to carry out the control of pipeline conditions. The geophysical methods are used to provide such diagnostic. Authors have studied the corrosion processes of the municipal heating system pipelines in Saint-Petersburg (Russia) using the air thermal imaging method, the investigation of electromagnetic fields and spontaneous polarization, measurements of electrode potentials of metal tubes. The pipeline reparation works, which have been provided this year, allowed us to make the visual observation of pipes. The investigation object comprises a pipeline composed of two parallel tubes, which are placed 1-2 meters deep. The fact that the Russian Federation and CIS countries still use the direct heat supply system makes impossible any addition of anticorrosion components to circulating water. Pipelines operate under high pressure (up to 5 atm) and high temperature (designed temperature is 150°C). Tube's isolation is meant for heat loss minimization, and ordinary has poor hydro-isolation. Some pipeline construction elements (sliding and fixed bearings, pressure compensators, heat enclosures) are often non-isolated, and tube's metal contacts with soil. Hard usage condition, ingress of technical contamination cause, stray currents etc. cause high accidental rate. Realization of geophysical diagnostics, including electrometry, is hampered in a city by underground communication systems, power lines, isolating ground cover (asphalt), limitation of the working area with buildings. These restrictions form the investigation conditions. In order to detect and localize isolation (coat) defects authors

  8. Precursor transformation method for damage detection in structures

    NASA Astrophysics Data System (ADS)

    Mehrabi, Armin B.; Tabatabai, Habib; Lotfi, Hamid R.

    1998-06-01

    In this paper, a new concept for damage detection and long- term health monitoring of structures is presented. The Precursor Transformation Method (PTM) is based on determining the causes (precursors) of change in the measured state of the structure under non-variable loading conditions (e.g. dead loads in bridges). The PTM concept addresses the inability of the current structural monitoring methods to discriminate, in structural behavior terms, the meaning of voluminous measured sensor data on a timely and cost effective basis. This method offers advantages in sensitivity and cost efficiency when compared to conventional vibration-based or parameter estimation methods. PTM was developed as part of a research project sponsored by the Federal Highway Administration on bridge stay cable condition assessment. Measured changes in the state of a structure (displacements, strains, internal forces) can be related to precursors through a transformation matrix. This matrix is formed by determining the patterns of change in the state of structure associated with externally imposed strains (temperatures) or displacements representing possible damage scenarios. A finite element model of the undamaged structure is used to calculate these patterns. The use of an undamaged model of the structure in determining damage patterns simplifies the calculation process significantly, while introducing some approximation in results. Theoretical derivations and special case studies indicate that these approximations are limited to second order effects, and in many cases well within measurement and calculation accuracies. Examples using simulated damages on two truss structures and a cable-stayed bridge are also presented.

  9. Detecting Taiwan's Shanchiao Active Fault Using AMT and Gravity Methods

    NASA Astrophysics Data System (ADS)

    Liu, H.-C.; Yang, C.-H.

    2009-04-01

    Taiwan's Shanchiao normal fault runs in a northeast-southwest direction and is located on the western edge of the Taipei Basin in northern Taiwan. The overburden of the fault is late Quaternary sediment with a thickness of approximately a few tenth of a meter to several hundred meters. No detailed studies of the western side of the Shanchiao fault are available. As Taiwan is located on the Neotectonic Belt in the western Pacific, detecting active faults near the Taipei metropolitan area will provide necessary information for further disaster prevention. It is the responsibility of geologists and geophysicists in Taiwan to perform this task. Examination of the resistivity and density contrasts of subsurface layers permits a mapping of the Shanchiao fault and the deformed Tertiary strata of the Taipei Basin. The audio-frequency magnetotelluric (AMT) method and gravity method were chosen for this study. Significant resistivity and gravity anomalies were observed in the suspected fault zone. The interpretation reveals a good correlation between the features of the Shanchiao fault and resistivity and density distribution at depth. In this observation, AMT and gravity methods provides a viable means for mapping the Shanchiao fault position and studying its features associated with the subsidence of the western side of the Taipei Basin. This study indicates the AMT and gravity methods' considerable potential for accurately mapping an active fault.

  10. Damage Detection Using the Frequency-Response Curvature Method

    NASA Astrophysics Data System (ADS)

    SAMPAIO, R. P. C.; MAIA, N. M. M.; SILVA, J. M. M.

    1999-10-01

    Structural damage detection has gained increasing attention from the scientific community since unpredicted major hazards, most with human losses, have been reported. Aircraft crashes and the catastrophic bridge failures are some examples. Security and economy aspects are the important motivations for increasing research on structural health monitoring. Since damage alters the dynamic characteristics of a structure, namely its eigenproperties (natural frequencies, modal damping and modes of vibration), several techniques based on experimental modal analysis have been developed in recent years. A method that covers the four steps of the process of damage detection—existence, localization, extent and prediction—has not yet been recognized or reported. The frequency-response-function (FRF) curvature method encompasses the first three referred steps being based on only the measured data without the need for any modal identification. In this paper, the method is described theoretically and compared with two of the most referenced methods on literature. Numerically generated data, from a lumped-mass system, and experimental data, from a real bridge, are used for better illustration.

  11. Use of the envelope detection method to detect micro-Doppler

    NASA Astrophysics Data System (ADS)

    Greneker, Eugene F., III; Sylvester, Vincent B.

    2003-08-01

    Georgia Tech Research Institute (GTRI) was tasked by the U.S. Department of Transportation (USDOT), Federal Highway Administration (FHWA), to test the Safety Warning System« (SWS) for application as an in-vehicle communications system. In addition to the communications function, the system has a 24 GHz homodyne Doppler radar function that provides the system"s micro-controller with traffic counts and speed information on passing vehicles. One task was to use the homodyne radar to see if the resonant frequency of an 18 wheel tractor trailer could be determined while the truck was at a distance from the radar (Greneker, et al.). This led to a study of additional methods to detect low frequency resonance effects excited by the interaction between the highway and the suspension system of a tractor trailer when the body induced Doppler signal is many orders of magnitude larger than the resonance frequency of interest. This paper describes a method that the authors call the "envelope detection" method. This micro-Doppler extraction technique has proven useful to extract small vibration and resonance induced signals in the presence of a large Doppler signal from the radar energy reflected from the radiator, hood and cab of the tractor trailer used in testing.

  12. A Distributed Signature Detection Method for Detecting Intrusions in Sensor Systems

    PubMed Central

    Kim, Ilkyu; Oh, Doohwan; Yoon, Myung Kuk; Yi, Kyueun; Ro, Won Woo

    2013-01-01

    Sensor nodes in wireless sensor networks are easily exposed to open and unprotected regions. A security solution is strongly recommended to prevent networks against malicious attacks. Although many intrusion detection systems have been developed, most systems are difficult to implement for the sensor nodes owing to limited computation resources. To address this problem, we develop a novel distributed network intrusion detection system based on the Wu–Manber algorithm. In the proposed system, the algorithm is divided into two steps; the first step is dedicated to a sensor node, and the second step is assigned to a base station. In addition, the first step is modified to achieve efficient performance under limited computation resources. We conduct evaluations with random string sets and actual intrusion signatures to show the performance improvement of the proposed method. The proposed method achieves a speedup factor of 25.96 and reduces 43.94% of packet transmissions to the base station compared with the previously proposed method. The system achieves efficient utilization of the sensor nodes and provides a structural basis of cooperative systems among the sensors. PMID:23529146

  13. Detection methods for non-Gaussian gravitational wave stochastic backgrounds

    NASA Astrophysics Data System (ADS)

    Drasco, Steve; Flanagan, Éanna É.

    2003-04-01

    A gravitational wave stochastic background can be produced by a collection of independent gravitational wave events. There are two classes of such backgrounds, one for which the ratio of the average time between events to the average duration of an event is small (i.e., many events are on at once), and one for which the ratio is large. In the first case the signal is continuous, sounds something like a constant hiss, and has a Gaussian probability distribution. In the second case, the discontinuous or intermittent signal sounds something like popcorn popping, and is described by a non-Gaussian probability distribution. In this paper we address the issue of finding an optimal detection method for such a non-Gaussian background. As a first step, we examine the idealized situation in which the event durations are short compared to the detector sampling time, so that the time structure of the events cannot be resolved, and we assume white, Gaussian noise in two collocated, aligned detectors. For this situation we derive an appropriate version of the maximum likelihood detection statistic. We compare the performance of this statistic to that of the standard cross-correlation statistic both analytically and with Monte Carlo simulations. In general the maximum likelihood statistic performs better than the cross-correlation statistic when the stochastic background is sufficiently non-Gaussian, resulting in a gain factor in the minimum gravitational-wave energy density necessary for detection. This gain factor ranges roughly between 1 and 3, depending on the duty cycle of the background, for realistic observing times and signal strengths for both ground and space based detectors. The computational cost of the statistic, although significantly greater than that of the cross-correlation statistic, is not unreasonable. Before the statistic can be used in practice with real detector data, further work is required to generalize our analysis to accommodate separated, misaligned

  14. Multitemporal spectroscopy for crop stress detection using band selection methods

    NASA Astrophysics Data System (ADS)

    Mewes, Thorsten; Franke, Jonas; Menz, Gunter

    2008-08-01

    A fast and precise sensor-based identification of pathogen infestations in wheat stands is essential for the implementation of site-specific fungicide applications. Several works have shown possibilities and limitations for the detection of plant stress using spectral sensor data. Hyperspectral data provide the opportunity to collect spectral reflectance in contiguous bands over a broad range of the electromagnetic spectrum. Individual phenomena like the light absorption of leaf pigments can be examined in detail. The precise knowledge of stress-dependent shifting in certain spectral wavelengths provides great advantages in detecting fungal infections. This study focuses on band selection techniques for hyperspectral data to identify relevant and redundant information in spectra regarding a detection of plant stress caused by pathogens. In a laboratory experiment, five 1 sqm boxes with wheat were multitemporarily measured by a ASD Fieldspec® 3 FR spectroradiometer. Two stands were inoculated with Blumeria graminis - the pathogen causing powdery mildew - and one stand was used to simulate the effect of water deficiency. Two stands were kept healthy as control stands. Daily measurements of the spectral reflectance were taken over a 14-day period. Three ASD Pro Lamps were used to illuminate the plots with constant light. By applying band selection techniques, the three types of different wheat vitality could be accurately differentiated at certain stages. Hyperspectral data can provide precise information about pathogen infestations. The reduction of the spectral dimension of sensor data by means of band selection procedures is an appropriate method to speed up the data supply for precision agriculture.

  15. Method for increased detection range in IR warning systems

    NASA Astrophysics Data System (ADS)

    Arad, Eyal; Roit, Paula

    2014-10-01

    Target range of Infra-Red (IR) point target warning systems, is determined by the effective entrance pupil diameter of the system's optics. In addition, the system's F/# is usually set by the detector (as in cryogenically cooled detectors). Moreover, the detector's aspect-ratio usually set the field proportions (5:4, 4:3, etc.).Thus for example, for wide angle systems, the horizontal coverage angle is usually determining the vertical one. We propose a system including anamorphic optics that changes the effective focal length of each axis independently, keeping the detector's given F/#, thus changing the effective aperture. Since the range is approximately proportional to the effective aperture, we achieve a range improvement of the square-root of the vertical and horizontal focal length ratio, reducing the vertical coverage accordingly. In this way, we make the field proportions less dependent of the detector's proportions. Using this method, it is made possible for wide angle systems to improve target detection range on the expense of the vertical coverage, without changing the horizontal coverage or increasing the amount of detection units (e.g. FLIRs).

  16. An electrochemical immunosensing method for detecting melanoma cells.

    PubMed

    Seenivasan, Rajesh; Maddodi, Nityanand; Setaluri, Vijaysaradhi; Gunasekaran, Sundaram

    2015-06-15

    An electrochemical immunosensing method was developed to detect melanoma cells based on the affinity between cell surface melanocortin 1 receptor (MC1R) antigen and anti-MC1R antibody (MC1R-Ab). The MC1R-Abs were immobilized in amino-functionalized silica nanoparticles (n-SiNPs)-polypyrrole (PPy) nanocomposite modified on working electrode surface of screen-printed electrode (SPE). Cyclic voltammetry was employed, with the help of redox mediator ([Fe(CN)6](3-)), to measure the change in anodic oxidation peak current arising due to the specific interaction between MC1R antigens and MC1R-Abs when the target melanoma cells are present in the sample. Various factors affecting the sensor performance, such as the amount of MC1R-Abs loaded, incubation time with the target melanoma cells, the presence of interfering non-melanoma cells, were tested and optimized over different expected melanoma cell loads in the range of 50-7500 cells/2.5 mL. The immunosensor is highly sensitive (20 cells/mL), specific, and reproducible, and the antibody-loaded electrode in ready-to-use stage is stable over two weeks. Thus, in conjunction with a microfluidic lab-on-a-chip device our electrochemical immunosensing approach may be suitable for highly sensitive, selective, and rapid detection of circulating tumor cells (CTCs) in blood samples.

  17. An electrochemical immunosensing method for detecting melanoma cells

    PubMed Central

    Seenivasan, Rajesh; Maddodi, Nityanand; Setaluri, Vijaysaradhi; Gunasekaran, Sundaram

    2015-01-01

    An electrochemical immunosensing method was developed to detect melanoma cells based on the affinity between cell surface melanocortin 1 receptor (MC1R) antigen and anti-MC1R antibody (MC1R-Ab). The MC1R-Abs were immobilized in amino-functionalized silica nanoparticles (n-SiNPs)-polypyrrole (PPy) nanocomposite modified on working electrode surface of screen-printed electrode (SPE). Cyclic voltammetry was employed, with the help of redox mediator ([Fe(CN)6]3−), to measure the change in anodic oxidation peak current arising due to the specific interaction between MC1R antigens and MC1R-Abs when the target melanoma cells are present in the sample. Various factors affecting the sensor performance, such as the amount of MC1R-Abs loaded, incubation time with the target melanoma cells, the presence of interfering non-melanoma cells, were tested and optimized over different expected melanoma cell loads in the range of 50–7500 cells/2.5 mL. The immunosensor is highly sensitive (20 cells/mL), specific, and reproducible, and the antibody-loaded electrode in ready-to-use stage is stable over two weeks. Thus, in conjunction with a microfluidic lab-on-a-chip device our electrochemical immunosensing approach may be suitable for highly sensitive, selective, and rapid detection of circulating tumor cells (CTCs) in blood samples. PMID:25636023

  18. Theoretical and experimental investigation of multispectral photoacoustic osteoporosis detection method

    NASA Astrophysics Data System (ADS)

    Steinberg, Idan; Hershkovich, Hadas Sara; Gannot, Israel; Eyal, Avishay

    2014-03-01

    Osteoporosis is a widespread disorder, which has a catastrophic impact on patients lives and overwhelming related to healthcare costs. Recently, we proposed a multispectral photoacoustic technique for early detection of osteoporosis. Such technique has great advantages over pure ultrasonic or optical methods as it allows the deduction of both bone functionality from the bone absorption spectrum and bone resistance to fracture from the characteristics of the ultrasound propagation. We demonstrated the propagation of multiple acoustic modes in animal bones in-vitro. To further investigate the effects of multiple wavelength excitations and of induced osteoporosis on the PA signal a multispectral photoacoustic system is presented. The experimental investigation is based on measuring the interference of multiple acoustic modes. The performance of the system is evaluated and a simple two mode theoretical model is fitted to the measured phase signals. The results show that such PA technique is accurate and repeatable. Then a multiple wavelength excitation is tested. It is shown that the PA response due to different excitation wavelengths revels that absorption by the different bone constitutes has a profound effect on the mode generation. The PA response is measured in single wavelength before and after induced osteoporosis. Results show that induced osteoporosis alters the measured amplitude and phase in a consistent manner which allows the detection of the onset of osteoporosis. These results suggest that a complete characterization of the bone over a region of both acoustic and optical frequencies might be used as a powerful tool for in-vivo bone evaluation.

  19. A survey about methods dedicated to epistasis detection

    PubMed Central

    Niel, Clément; Sinoquet, Christine; Dina, Christian; Rocheleau, Ghislain

    2015-01-01

    During the past decade, findings of genome-wide association studies (GWAS) improved our knowledge and understanding of disease genetics. To date, thousands of SNPs have been associated with diseases and other complex traits. Statistical analysis typically looks for association between a phenotype and a SNP taken individually via single-locus tests. However, geneticists admit this is an oversimplified approach to tackle the complexity of underlying biological mechanisms. Interaction between SNPs, namely epistasis, must be considered. Unfortunately, epistasis detection gives rise to analytic challenges since analyzing every SNP combination is at present impractical at a genome-wide scale. In this review, we will present the main strategies recently proposed to detect epistatic interactions, along with their operating principle. Some of these methods are exhaustive, such as multifactor dimensionality reduction, likelihood ratio-based tests or receiver operating characteristic curve analysis; some are non-exhaustive, such as machine learning techniques (random forests, Bayesian networks) or combinatorial optimization approaches (ant colony optimization, computational evolution system). PMID:26442103

  20. A bedside dipstick method to detect Plasmodium falciparum.

    PubMed

    Shah, Ira; Deshmukh, C T

    2004-11-01

    We conducted this study to determine efficacy of Parasight-F (an HRP-II antigen dipstick method to detect P. Falciparum) in children. A total of 30 children were enrolled in the age group of 2 months to 12 years whose peripheral smear showed asexual forms of Plasmodium falciparum. All patients were tested for presence of HRP-II antigen of Plasmodium falciparum in their blood by the Parasight-F dipstick test by either an EDTA sample or a finger prick blood sample. The sensitivity of Parasight-F was 83.3 % However, the sensitivity of Parasight-F to detect Plasmodium Falciparum in case of mixed Plasmodium (Vivax + Falciparum) infection was only 25 %. Also, all patients less than 6 months of age had a negative Parasight-F test. Parasitic index, prior treatment with antimalarials or severity of Falciparum malaria have no effect on the sensitivity of Parasight-F test. We conclude that Parasight-F is an effective tool for diagnosis of Plasmoduim falciparum malaria in children. PMID:15591666

  1. Detection of gravity field source boundaries using deconvolution method

    NASA Astrophysics Data System (ADS)

    Zuo, Boxin; Hu, Xiangyun; Liang, Yin; Han, Qi

    2014-12-01

    Complications arise in the interpretation of gravity fields because of interference from systematic degradations, such as boundary blurring and distortion. The major sources of these degradations are the various systematic errors that inevitably occur during gravity field data acquisition, discretization and geophysical forward modelling. To address this problem, we evaluate deconvolution method that aim to detect the clear horizontal boundaries of anomalous sources by the suppression of systematic errors. A convolution-based multilayer projection model, based on the classical 3-D gravity field forward model, is innovatively derived to model the systematic error degradation. Our deconvolution algorithm is specifically designed based on this multilayer projection model, in which three types of systematic error are defined. The degradations of the different systematic errors are considered in the deconvolution algorithm. As the primary source of degradation, the convolution-based systematic error is the main object of the multilayer projection model. Both the random systematic error and the projection systematic error are shown to form an integral part of the multilayer projection model, and the mixed norm regularization method and the primal-dual optimization method are therefore employed to control these errors and stabilize the deconvolution solution. We herein analyse the parameter identification and convergence of the proposed algorithms, and synthetic and field data sets are both used to illustrate their effectiveness. Additional synthetic examples are specifically designed to analyse the effects of the projection systematic error, which is caused by the uncertainty associated with the estimation of the impulse response function.

  2. Detection of biological thiols based on a colorimetric method*

    PubMed Central

    Xu, Yuan-yuan; Sun, Yang-yang; Zhang, Yu-juan; Lu, Chen-he; Miao, Jin-feng

    2016-01-01

    Biological thiols (biothiols), an important kind of functional biomolecules, such as cysteine (Cys) and glutathione (GSH), play vital roles in maintaining the stability of the intracellular environment. In past decades, studies have demonstrated that metabolic disorder of biothiols is related to many serious disease processes and will lead to extreme damage in human and numerous animals. We carried out a series of experiments to detect biothiols in biosamples, including bovine plasma and cell lysates of seven different cell lines based on a simple colorimetric method. In a typical test, the color of the test solution could gradually change from blue to colorless after the addition of biothiols. Based on the color change displayed, experimental results reveal that the percentage of biothiols in the embryonic fibroblast cell line is significantly higher than those in the other six cell lines, which provides the basis for the following biothiols-related study. PMID:27704750

  3. Apparatuses for large area radiation detection and related method

    DOEpatents

    Akers, Douglas W; Drigert, Mark W

    2015-04-28

    Apparatuses and a related method relating to radiation detection are disclosed. In one embodiment, an apparatus includes a first scintillator and a second scintillator adjacent to the first scintillator, with each of the first scintillator and second scintillator being structured to generate a light pulse responsive to interacting with incident radiation. The first scintillator is further structured to experience full energy deposition of a first low-energy radiation, and permit a second higher-energy radiation to pass therethrough and interact with the second scintillator. The apparatus further includes a plurality of light-to-electrical converters operably coupled to the second scintillator and configured to convert light pulses generated by the first scintillator and the second scintillator into electrical signals. The first scintillator and the second scintillator exhibit at least one mutually different characteristic for an electronic system to determine whether a given light pulse is generated by the first scintillator or the second scintillator.

  4. [Development of PCR methods for detection of EAV infection].

    PubMed

    Brunner; Santschi; Gerber; Burger; Zanoni

    2014-11-01

    The goal of this work was the development of suitable (real-time) RT-PCR techniques for fast and sensitive diagnosis of EAV and for molecular-epidemiological characterisation of viral strains, as an alternative to virus isolation. To this purpose two conventional RT-PCR methods and one real-time RT-PCR were adapted to detect the broadest possible spectrum of viral strains. Several dilutions with Bucyrus strain showed a 100-fold higher sensitivity of real-time RT-PCR and heminested RT-PCR compared to simple RT-PCR. Making use of 11 cell culture supernatants of different EAV isolates and 7 semen samples of positive stallions, the suitability of the techniques could be shown. Phylogenetic analysis of sequences of the newly analysed samples compared with known sequences indicated that more EAV-lineages exist than presently described.

  5. Gas sensitive materials for gas detection and method of making

    DOEpatents

    Trakhtenberg, Leonid Israilevich; Gerasimov, Genrikh Nikolaevich; Gromov, Vladimir Fedorovich; Rozenberg, Valeriya Isaakovna

    2012-12-25

    A gas sensitive material comprising SnO2 nanocrystals doped with In2O3 and an oxide of a platinum group metal, and a method of making the same. The platinum group metal is preferably Pd, but also may include Pt, Ru, Ir, and combinations thereof. The SnO2 nanocrystals have a specific surface of 7 or greater, preferably about 20 m2/g, and a mean particle size of between about 10 nm and about 100 nm, preferably about 40 nm. A gas detection device made from the gas sensitive material deposited on a substrate, the gas sensitive material configured as a part of a current measuring circuit in communication with a heat source.

  6. Gas sensitive materials for gas detection and methods of making

    DOEpatents

    Trakhtenberg, Leonid Israilevich; Gerasimov, Genrikh Nikolaevich; Gromov, Vladimir Fedorovich; Rozenberg, Valeriya Isaakovna

    2014-07-15

    A gas sensitive material comprising SnO.sub.2 nanocrystals doped with In.sub.2O.sub.3 and an oxide of a platinum group metal, and a method of making the same. The platinum group metal is preferably Pd, but also may include Pt, Ru, Ir, and combinations thereof. The SnO.sub.2 nanocrystals have a specific surface of 7 or greater, preferably about 20 m2/g, and a mean particle size of between about 10 nm and about 100 nm, preferably about 40 nm. A gas detection device made from the gas sensitive material deposited on a substrate, the gas sensitive material configured as a part of a current measuring circuit in communication with a heat source.

  7. Method and apparatus for enhanced detection of toxic agents

    DOEpatents

    Greenbaum, Elias; Rodriguez, Jr., Miguel; Wu, Jie Jayne; Qi, Hairong

    2013-10-01

    A biosensor based detection of toxins includes enhancing a fluorescence signal by concentrating a plurality of photosynthetic organisms in a fluid into a concentrated region using biased AC electro-osmosis. A measured photosynthetic activity of the photosynthetic organisms is obtained in the concentrated region, where chemical, biological or radiological agents reduce a nominal photosynthetic activity of the photosynthetic organisms. A presence of the chemical, biological and/or radiological agents or precursors thereof, is determined in the fluid based on the measured photosynthetic activity of the concentrated plurality of photosynthetic organisms. A lab-on-a-chip system is used for the concentrating step. The presence of agents is determined from feature vectors, obtained from processing a time dependent signal using amplitude statistics and/or time-frequency analysis, relative to a control signal. A linear discriminant method including support vector machine classification (SVM) is used to identify the agents.

  8. Rapid and Sensitive Plate Method for Detection of Aspergillus fumigatus

    PubMed Central

    Bauters, T. G. M.; Nelis, H. J.

    2000-01-01

    The routine identification of Aspergillus fumigatus in clinical samples involves, apart from direct examination, the isolation of the organism on a plate followed by its microscopic characterization. This approach lacks sensitivity, specificity, and speed. A new procedure has been developed combining microcolony formation on a nylon membrane filter at 45°C with the detection of a specific 4-methylumbelliferyl-α-l-arabinopyranoside cleaving enzyme activity in digitonin permeabilized cells. The test takes approximately 14 h and has an efficiency of 98.2% and false-positive and -negative rates of 0 and 3.1%, respectively. When applied to 188 clinical samples taken from patients with proven or nonproven presence of Aspergillus species, a good agreement with the conventional plate-microscopy method was obtained. PMID:11015405

  9. Ionization detector, electrode configuration and single polarity charge detection method

    DOEpatents

    He, Z.

    1998-07-07

    An ionization detector, an electrode configuration and a single polarity charge detection method each utilize a boundary electrode which symmetrically surrounds first and second central interlaced and symmetrical electrodes. All of the electrodes are held at a voltage potential of a first polarity type. The first central electrode is held at a higher potential than the second central or boundary electrodes. By forming the first and second central electrodes in a substantially interlaced and symmetrical pattern and forming the boundary electrode symmetrically about the first and second central electrodes, signals generated by charge carriers are substantially of equal strength with respect to both of the central electrodes. The only significant difference in measured signal strength occurs when the charge carriers move to within close proximity of the first central electrode and are received at the first central electrode. The measured signals are then subtracted and compared to quantitatively measure the magnitude of the charge. 10 figs.

  10. Ionization detector, electrode configuration and single polarity charge detection method

    DOEpatents

    He, Zhong

    1998-01-01

    An ionization detector, an electrode configuration and a single polarity charge detection method each utilize a boundary electrode which symmetrically surrounds first and second central interlaced and symmetrical electrodes. All of the electrodes are held at a voltage potential of a first polarity type. The first central electrode is held at a higher potential than the second central or boundary electrodes. By forming the first and second central electrodes in a substantially interlaced and symmetrical pattern and forming the boundary electrode symmetrically about the first and second central electrodes, signals generated by charge carriers are substantially of equal strength with respect to both of the central electrodes. The only significant difference in measured signal strength occurs when the charge carriers move to within close proximity of the first central electrode and are received at the first central electrode. The measured signals are then subtracted and compared to quantitatively measure the magnitude of the charge.

  11. System and Method for Detecting Cracks and their Location

    NASA Technical Reports Server (NTRS)

    Woodward, Stanley E. (Inventor); Shams, Qamar A. (Inventor)

    2007-01-01

    A system and method are provided for detecting cracks and their location in a structure. A circuit coupled to a structure has capacitive strain sensors coupled sequentially and in parallel to one another. When excited by a variable magnetic field, the circuit has a resonant frequency that is different for unstrained and strained states. In terms of strained states, the resonant frequency is indicative of a region of the circuit that is experiencing strain induced by strain in a region of the structure in proximity to the region of the circuit. An inductor is electrically coupled to one end of each circuit. A magnetic field response recorder wirelessly transmits the variable magnetic field to the inductor and senses the resonant frequency of the circuit so-excited by the variable magnetic field.

  12. Systems and methods for detecting x-rays

    DOEpatents

    Bross, Alan D.; Mellott, Kerry L.; Pla-Dalmau, Anna

    2006-05-02

    Systems and methods for detecting x-rays are disclosed herein. One or more x-ray-sensitive scintillators can be configured from a plurality of heavy element nano-sized particles and a plastic material, such as polystyrene. As will be explained in greater detail herein, the heavy element nano-sized particles (e.g., PbWO4) can be compounded into the plastic material with at least one dopant that permits the plastic material to scintillate. X-rays interact with the heavy element nano-sized particles to produce electrons that can deposit energy in the x-ray sensitive scintillator, which in turn can produce light.

  13. Nanotunneling Junction-based Hyperspectal Polarimetric Photodetector and Detection Method

    NASA Technical Reports Server (NTRS)

    Son, Kyung-ah (Inventor); Moon, Jeongsun J. (Inventor); Chattopadhyay, Goutam (Inventor); Liao, Anna (Inventor); Ting, David (Inventor)

    2009-01-01

    A photodetector, detector array, and method of operation thereof in which nanojunctions are formed by crossing layers of nanowires. The crossing nanowires are separated by a few nm thick electrical barrier layer which allows tunneling. Each nanojunction is coupled to a slot antenna for efficient and frequency-selective coupling to photo signals. The nanojunctions formed at the intersection of the crossing wires defines a vertical tunneling diode that rectifies the AC signal from a coupled antenna and generates a DC signal suitable for reforming a video image. The nanojunction sensor allows multi/hyper spectral imaging of radiation within a spectral band ranging from terahertz to visible light, and including infrared (IR) radiation. This new detection approach also offers unprecedented speed, sensitivity and fidelity at room temperature.

  14. Acrylamide: formation, occurrence in food products, detection methods, and legislation.

    PubMed

    Arvanitoyannis, Ioannis S; Dionisopoulou, Niki

    2014-01-01

    This review aims at summarizing the most recent updates in the field of acrylamide (AA) formation (mechanism, conditions) and the determination of AA in a number of foods (fried or baked potatoes, chips, coffee, bread, etc). The methods applied for AA detection [Capillary Electrophoresis-Mass Spectrometry (CE-MS), Liquid Chromatography-Mass Spectrometry (LC-MS), Non-Aqueous Capillary Electrophoresis (NACE), High Performance Liquid Chromatography-Mass Spectrometry (HPLC-MS), Pressurized Fluid Extraction (PFE), Matrix Solid-Phase Dispersion (MSPD), Gas Chromatography-Mass Spectrometry (GC-MS), Solid-Phase MicroExtraction-Gas Chromatography (SPME-GC), Enzyme Linked Immunosorbent Assay (ELISA), and MicroEmulsion ElectroKinetic Chromatography (MEEKC) are presented and commented. Several informative figures and tables are included to show the effect of conditions (temperature, time) on the AA formation. A section is also included related to AA legislation in EU and US. PMID:24345045

  15. Improved method for the detection of TATP after explosion.

    PubMed

    Muller, D; Levy, A; Shelef, R; Abramovich-Bar, S; Sonenfeld, D; Tamiri, T

    2004-09-01

    TATP in post explosion exhibits was reported earlier to be best recovered from vapor phase. A typical procedure includes its adsorption on Amberlite XAD-7, elution with acetonitrile and analysis by GC/MS. In this work, improved recovery of TATP from the vapor phase was achieved by SPME using PDMS/DVB fiber and immediate sampling to GC/MS. The recovery of TATP by SPME was compared with headspace and with adsorption on Amberlite XAD-7 by spiking onto filter paper put in a 100 mL beaker. The limit of detection of TATP was 6.4 ng in these conditions, few orders magnitude more than in the other tested methods. Recovery of TATP in the presence of various solvents was also studied. Acetone, water, and mixtures of water:alcohols (1:1) were found to reduce the recovery of TATP. Using SPME, TATP has been identified in dozens of post-explosion cases.

  16. Pathogen detection in milk samples by ligation detection reaction-mediated universal array method.

    PubMed

    Cremonesi, P; Pisoni, G; Severgnini, M; Consolandi, C; Moroni, P; Raschetti, M; Castiglioni, B

    2009-07-01

    This paper describes a new DNA chip, based on the use of a ligation detection reaction coupled to a universal array, developed to detect and analyze, directly from milk samples, microbial pathogens known to cause bovine, ovine, and caprine mastitis or to be responsible for foodborne intoxication or infection, or both. Probes were designed for the identification of 15 different bacterial groups: Staphylococcus aureus, Streptococcus agalactiae, nonaureus staphylococci, Streptococcus bovis, Streptococcus equi, Streptococcus canis, Streptococcus dysgalactiae, Streptococcus parauberis, Streptococcus uberis, Streptococcus pyogenes, Mycoplasma spp., Salmonella spp., Bacillus spp., Campylobacter spp., and Escherichia coli and related species. These groups were identified based on the 16S rRNA gene. For microarray validation, 22 strains from the American Type Culture Collection or other culture collections and 50 milk samples were tested. The results demonstrated high specificity, with sensitivity as low as 6 fmol. Moreover, the ligation detection reaction-universal array assay allowed for the identification of Mycoplasma spp. in a few hours, avoiding the long incubation times of traditional microbiological identification methods. The universal array described here is a versatile tool able to identify milk pathogens efficiently and rapidly. PMID:19528580

  17. Methods to detect cyanobacteria and their toxins in the environment.

    PubMed

    Moreira, Cristiana; Ramos, Vitor; Azevedo, Joana; Vasconcelos, Vitor

    2014-10-01

    Cyanobacteria blooms are since early times a cause for environmental concern because of their negative impact through the release of odors, water discoloration, and more dangerously through the release of toxic compounds (i.e. the cyanotoxins) that can affect both human and animal welfare. Surveillance of the aquatic ecosystems is therefore obligatory, and methods to achieve such require a prompt answer not only regarding the species that are producing the blooms but also the cyanotoxins that are being produced and/or released. Moreover, besides this well-known source of possible intoxication, it has been demonstrated the existence of several other potential routes of exposure, either for humans or other biota such as through food additives and in terrestrial environments (in plants, lichens, biological soil crusts) and the recognition of their harmful impact on less studied ecosystems (e.g. coral reefs). Nowadays, the most frequent approaches to detect toxic cyanobacteria and/or their toxins are the chemical-, biochemical-, and molecular-based methods. Above their particular characteristics and possible applications, they all bring to the environmental monitoring several aspects that are needed to be discussed and scrutinized. The end outcome of this review will be to provide newer insights and recommendations regarding the methods needed to apply in an environmental risk assessment program. Therefore, a current state of the knowledge concerning the three methodological approaches will be presented, while highlighting positive and negative aspects of each of those methods within the purpose of monitoring or studying cyanobacteria and their toxins in the environment.

  18. Detection of cancer metastasis using a novel macroscopic hyperspectral method

    NASA Astrophysics Data System (ADS)

    Akbari, Hamed; Halig, Luma V.; Zhang, Hongzheng; Wang, Dongsheng; Chen, Zhuo G.; Fei, Baowei

    2012-03-01

    The proposed macroscopic optical histopathology includes a broad-band light source which is selected to illuminate the tissue glass slide of suspicious pathology, and a hyperspectral camera that captures all wavelength bands from 450 to 950 nm. The system has been trained to classify each histologic slide based on predetermined pathology with light having a wavelength within a predetermined range of wavelengths. This technology is able to capture both the spatial and spectral data of tissue. Highly metastatic human head and neck cancer cells were transplanted to nude mice. After 2- 3 weeks, the mice were euthanized and the lymph nodes and lung tissues were sent to pathology. The metastatic cancer is studied in lymph nodes and lungs. The pathological slides were imaged using the hyperspectral camera. The results of the proposed method were compared to the pathologic report. Using hyperspectral images, a library of spectral signatures for different tissues was created. The high-dimensional data were classified using a support vector machine (SVM). The spectra are extracted in cancerous and non-cancerous tissues in lymph nodes and lung tissues. The spectral dimension is used as the input of SVM. Twelve glasses are employed for training and evaluation. The leave-one-out cross-validation method is used in the study. After training, the proposed SVM method can detect the metastatic cancer in lung histologic slides with the specificity of 97.7% and the sensitivity of 92.6%, and in lymph node slides with the specificity of 98.3% and the sensitivity of 96.2%. This method may be able to help pathologists to evaluate many histologic slides in a short time.

  19. Synthetic cannabinoids pharmacokinetics and detection methods in biological matrices.

    PubMed

    Castaneto, Marisol S; Wohlfarth, Ariane; Desrosiers, Nathalie A; Hartman, Rebecca L; Gorelick, David A; Huestis, Marilyn A

    2015-05-01

    Synthetic cannabinoids (SC), originally developed as research tools, are now highly abused novel psychoactive substances. We present a comprehensive systematic review covering in vivo and in vitro animal and human pharmacokinetics and analytical methods for identifying SC and their metabolites in biological matrices. Of two main phases of SC research, the first investigated therapeutic applications, and the second abuse-related issues. Administration studies showed high lipophilicity and distribution into brain and fat tissue. Metabolite profiling studies, mostly with human liver microsomes and human hepatocytes, structurally elucidated metabolites and identified suitable SC markers. In general, SC underwent hydroxylation at various molecular sites, defluorination of fluorinated analogs and phase II metabolites were almost exclusively glucuronides. Analytical methods are critical for documenting intake, with different strategies applied to adequately address the continuous emergence of new compounds. Immunoassays have different cross-reactivities for different SC classes, but cannot keep pace with changing analyte targets. Gas chromatography and liquid chromatography mass spectrometry assays - first for a few, then numerous analytes - are available but constrained by reference standard availability, and must be continuously updated and revalidated. In blood and oral fluid, parent compounds are frequently present, albeit in low concentrations; for urinary detection, metabolites must be identified and interpretation is complex due to shared metabolic pathways. A new approach is non-targeted HRMS screening that is more flexible and permits retrospective data analysis. We suggest that streamlined assessment of new SC's pharmacokinetics and advanced HRMS screening provide a promising strategy to maintain relevant assays.

  20. Rapid surface enhanced Raman scattering detection method for chloramphenicol residues.

    PubMed

    Ji, Wei; Yao, Weirong

    2015-06-01

    Chloramphenicol (CAP) is a widely used amide alcohol antibiotics, which has been banned from using in food producing animals in many countries. In this study, surface enhanced Raman scattering (SERS) coupled with gold colloidal nanoparticles was used for the rapid analysis of CAP. Density functional theory (DFT) calculations were conducted with Gaussian 03 at the B3LYP level using the 3-21G(d) and 6-31G(d) basis sets to analyze the assignment of vibrations. Affirmatively, the theoretical Raman spectrum of CAP was in complete agreement with the experimental spectrum. They both exhibited three strong peaks characteristic of CAP at 1104 cm(-1), 1344 cm(-1), 1596 cm(-1), which were used for rapid qualitative analysis of CAP residues in food samples. The use of SERS as a method for the measurements of CAP was explored by comparing use of different solvents, gold colloidal nanoparticles concentration and absorption time. The method of the detection limit was determined as 0.1 μg/mL using optimum conditions. The Raman peak at 1344 cm(-1) was used as the index for quantitative analysis of CAP in food samples, with a linear correlation of R(2)=0.9802. Quantitative analysis of CAP residues in foods revealed that the SERS technique with gold colloidal nanoparticles was sensitive and of a good stability and linear correlation, and suited for rapid analysis of CAP residue in a variety of food samples. PMID:25754387

  1. Multi-level damage detection with nonlinear ultrasonic methods

    NASA Astrophysics Data System (ADS)

    Matlack, Kathryn H.; Kim, Jin-Yeon; Jacobs, Laurence J.; Qu, Jianmin

    2013-01-01

    The nonlinear ultrasonic method of second harmonic generation is used to detect multiple levels of damage on a single specimen. There is a breadth of research in the literature that measures the second harmonic and the resulting nonlinear parameter to monitor increasing amounts of uniform damage, but for this method to be applicable as an in situ technique, it must be able to scan an area of a structure with varying amounts of damage over a region. To investigate this, an aluminum alloy sample is shot-peened to two intensity levels along its length, to produce different sections of cold work and residual stress as a function of spatial location. Previous research has shown that the residual stress and cold work introduced in a material from shot peening causes an increase in the nonlinear parameter. Rayleigh waves are generated in the sample and the first and second harmonic amplitudes are measured at increasing propagation distances that encompass an undamaged section and two sections, each with different levels of shot peening. Results show that the nonlinear parameter increases as the Rayleigh wedge sensor is scanned over the shot peening sections.

  2. Rapid surface enhanced Raman scattering detection method for chloramphenicol residues

    NASA Astrophysics Data System (ADS)

    Ji, Wei; Yao, Weirong

    2015-06-01

    Chloramphenicol (CAP) is a widely used amide alcohol antibiotics, which has been banned from using in food producing animals in many countries. In this study, surface enhanced Raman scattering (SERS) coupled with gold colloidal nanoparticles was used for the rapid analysis of CAP. Density functional theory (DFT) calculations were conducted with Gaussian 03 at the B3LYP level using the 3-21G(d) and 6-31G(d) basis sets to analyze the assignment of vibrations. Affirmatively, the theoretical Raman spectrum of CAP was in complete agreement with the experimental spectrum. They both exhibited three strong peaks characteristic of CAP at 1104 cm-1, 1344 cm-1, 1596 cm-1, which were used for rapid qualitative analysis of CAP residues in food samples. The use of SERS as a method for the measurements of CAP was explored by comparing use of different solvents, gold colloidal nanoparticles concentration and absorption time. The method of the detection limit was determined as 0.1 μg/mL using optimum conditions. The Raman peak at 1344 cm-1 was used as the index for quantitative analysis of CAP in food samples, with a linear correlation of R2 = 0.9802. Quantitative analysis of CAP residues in foods revealed that the SERS technique with gold colloidal nanoparticles was sensitive and of a good stability and linear correlation, and suited for rapid analysis of CAP residue in a variety of food samples.

  3. Gearbox Typical Failure Modes, Detection, and Mitigation Methods (Presentation)

    SciTech Connect

    Sheng, S.

    2014-01-01

    This presentation was given at the AWEA Operations & Maintenance and Safety Seminar and focused on what the typical gearbox failure modes are, how to detect them using detection techniques, and strategies that help mitigate these failures.

  4. Position detectors, methods of detecting position, and methods of providing positional detectors

    DOEpatents

    Weinberg, David M.; Harding, L. Dean; Larsen, Eric D.

    2002-01-01

    Position detectors, welding system position detectors, methods of detecting various positions, and methods of providing position detectors are described. In one embodiment, a welding system positional detector includes a base that is configured to engage and be moved along a curved surface of a welding work piece. At least one position detection apparatus is provided and is connected with the base and configured to measure angular position of the detector relative to a reference vector. In another embodiment, a welding system positional detector includes a weld head and at least one inclinometer mounted on the weld head. The one inclinometer is configured to develop positional data relative to a reference vector and the position of the weld head on a non-planar weldable work piece.

  5. Bioluminescent bioreporter integrated circuit devices and methods for detecting estrogen

    DOEpatents

    Simpson, Michael L.; Paulus, Michael J.; Sayler, Gary S.; Applegate, Bruce M.; Ripp, Steven A.

    2006-08-15

    Bioelectronic devices for the detection of estrogen include a collection of eukaryotic cells which harbor a recombinant lux gene from a high temperature microorganism wherein the gene is operably linked with a heterologous promoter gene. A detectable light-emitting lux gene product is expressed in the presence of the estrogen and detected by the device.

  6. Detection of irradiated fruits by gas-chromatographic methods.

    PubMed

    el-Dien, S; Farag, A

    1996-06-01

    To detect those fruits which have been subjected to low-dose irradiation (0.5-3 kGy), two methods of chromatography (GC-MS and LC-LC-GC-FID) were used to determine the radiolytic compounds of lipids formed after irradiation, such as alkanes and alkenes. Extraction of volatile hydrocarbon compounds from some parts of irradiated fruits, e.g. the flesh (avocado), seeds (papaya) and kernels (mango and apricot) was carried out. The analysis of hydrocarbons by GC-MS proved the suitability of using C17:1, C16:2, C15:0 and C14:1 as markers for avocados irradiated with a low dose (0.75 kGy). The same indicators appeared following the analysis of papayas and mangoes irradiated with 1.5, and 3.0 kGy. Also, C15:0, C14:1 and C16:3 can be used to identify apricots irradiated with a low dose (0.5 kGy). The detection of alkenes was only improved by a more selective isolation, e.g. of dienes or trienes by LC-LC-GC-FID. Within a few minutes, apricots and avocados irradiated at low doses (0.5 and 0.75 kGy) can be recognized by the indicators C16:2, C17:2 and C16:3, without interfering peaks. In all cases, C16:1, C16:2, C16:3 as well as significant amounts of C17:2 can be used as markers for fruit irradiation.

  7. Electronic Method to Detect Persons Hidden Within Cargo containers

    SciTech Connect

    Fuller, G.M.

    1997-11-10

    Physical security technologies have been unable to address most `Trojan Horse' scenarios at vehicle portals which provide access through the perimeter of a secure area. Thorough visual searches of vehicle cargo containers are time consuming, involve a number of security personnel and are cursory at best. Vehicles entering or exiting a protected site provide an adversary with an easy pathway across secure boundaries. A method to detect the presence of persons hiding within a vehicle's enclosed cargo container has been developed by LQckheed Martin Energy Systems. The system measures vibrations coupled to the container and generated by the human heart. Each time the human heart beats, it generates a small but measurable shock wave. This shock wave is propagated through the body and transmitted to anything with which the body has contact. This wave is referred to as a baflistocardiograrn and is the mechanical equivalent to an electrocardiogram. Systems have been installed in several State prisons and have been independently tested and evaluated. The effectiveness of the system has been determined by the Thunder Mountain Evaluation Center at Fort Huachuca. Arizona. Sympathetic vibrations of the cargo container's surface can be collected using any of several detection methods, i.e. infrared, Doppler microwave, Doppler ultrasonic wave and geophones. The analog signal delivered by the sensors is passed through an amplifier and a low pass filter and then fed to a microprocessor via an analog to digital converter. When initiated by the operator, anafog signals are recorded for a specific interval of time and rate. At the end of the recording intervaL the data are analysed using wavelet transform techniques and compared with a ballistocardiographic template. If the collected data are similar, the system informs the operator that there is a high degree of probability that a person is within the vehicle. The paper describes in depth the development of the system, system

  8. A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing

    PubMed Central

    Alioto, Tyler S.; Buchhalter, Ivo; Derdak, Sophia; Hutter, Barbara; Eldridge, Matthew D.; Hovig, Eivind; Heisler, Lawrence E.; Beck, Timothy A.; Simpson, Jared T.; Tonon, Laurie; Sertier, Anne-Sophie; Patch, Ann-Marie; Jäger, Natalie; Ginsbach, Philip; Drews, Ruben; Paramasivam, Nagarajan; Kabbe, Rolf; Chotewutmontri, Sasithorn; Diessl, Nicolle; Previti, Christopher; Schmidt, Sabine; Brors, Benedikt; Feuerbach, Lars; Heinold, Michael; Gröbner, Susanne; Korshunov, Andrey; Tarpey, Patrick S.; Butler, Adam P.; Hinton, Jonathan; Jones, David; Menzies, Andrew; Raine, Keiran; Shepherd, Rebecca; Stebbings, Lucy; Teague, Jon W.; Ribeca, Paolo; Giner, Francesc Castro; Beltran, Sergi; Raineri, Emanuele; Dabad, Marc; Heath, Simon C.; Gut, Marta; Denroche, Robert E.; Harding, Nicholas J.; Yamaguchi, Takafumi N.; Fujimoto, Akihiro; Nakagawa, Hidewaki; Quesada, Víctor; Valdés-Mas, Rafael; Nakken, Sigve; Vodák, Daniel; Bower, Lawrence; Lynch, Andrew G.; Anderson, Charlotte L.; Waddell, Nicola; Pearson, John V.; Grimmond, Sean M.; Peto, Myron; Spellman, Paul; He, Minghui; Kandoth, Cyriac; Lee, Semin; Zhang, John; Létourneau, Louis; Ma, Singer; Seth, Sahil; Torrents, David; Xi, Liu; Wheeler, David A.; López-Otín, Carlos; Campo, Elías; Campbell, Peter J.; Boutros, Paul C.; Puente, Xose S.; Gerhard, Daniela S.; Pfister, Stefan M.; McPherson, John D.; Hudson, Thomas J.; Schlesner, Matthias; Lichter, Peter; Eils, Roland; Jones, David T. W.; Gut, Ivo G.

    2015-01-01

    As whole-genome sequencing for cancer genome analysis becomes a clinical tool, a full understanding of the variables affecting sequencing analysis output is required. Here using tumour-normal sample pairs from two different types of cancer, chronic lymphocytic leukaemia and medulloblastoma, we conduct a benchmarking exercise within the context of the International Cancer Genome Consortium. We compare sequencing methods, analysis pipelines and validation methods. We show that using PCR-free methods and increasing sequencing depth to ∼100 × shows benefits, as long as the tumour:control coverage ratio remains balanced. We observe widely varying mutation call rates and low concordance among analysis pipelines, reflecting the artefact-prone nature of the raw data and lack of standards for dealing with the artefacts. However, we show that, using the benchmark mutation set we have created, many issues are in fact easy to remedy and have an immediate positive impact on mutation detection accuracy. PMID:26647970

  9. A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing.

    PubMed

    Alioto, Tyler S; Buchhalter, Ivo; Derdak, Sophia; Hutter, Barbara; Eldridge, Matthew D; Hovig, Eivind; Heisler, Lawrence E; Beck, Timothy A; Simpson, Jared T; Tonon, Laurie; Sertier, Anne-Sophie; Patch, Ann-Marie; Jäger, Natalie; Ginsbach, Philip; Drews, Ruben; Paramasivam, Nagarajan; Kabbe, Rolf; Chotewutmontri, Sasithorn; Diessl, Nicolle; Previti, Christopher; Schmidt, Sabine; Brors, Benedikt; Feuerbach, Lars; Heinold, Michael; Gröbner, Susanne; Korshunov, Andrey; Tarpey, Patrick S; Butler, Adam P; Hinton, Jonathan; Jones, David; Menzies, Andrew; Raine, Keiran; Shepherd, Rebecca; Stebbings, Lucy; Teague, Jon W; Ribeca, Paolo; Giner, Francesc Castro; Beltran, Sergi; Raineri, Emanuele; Dabad, Marc; Heath, Simon C; Gut, Marta; Denroche, Robert E; Harding, Nicholas J; Yamaguchi, Takafumi N; Fujimoto, Akihiro; Nakagawa, Hidewaki; Quesada, Víctor; Valdés-Mas, Rafael; Nakken, Sigve; Vodák, Daniel; Bower, Lawrence; Lynch, Andrew G; Anderson, Charlotte L; Waddell, Nicola; Pearson, John V; Grimmond, Sean M; Peto, Myron; Spellman, Paul; He, Minghui; Kandoth, Cyriac; Lee, Semin; Zhang, John; Létourneau, Louis; Ma, Singer; Seth, Sahil; Torrents, David; Xi, Liu; Wheeler, David A; López-Otín, Carlos; Campo, Elías; Campbell, Peter J; Boutros, Paul C; Puente, Xose S; Gerhard, Daniela S; Pfister, Stefan M; McPherson, John D; Hudson, Thomas J; Schlesner, Matthias; Lichter, Peter; Eils, Roland; Jones, David T W; Gut, Ivo G

    2015-01-01

    As whole-genome sequencing for cancer genome analysis becomes a clinical tool, a full understanding of the variables affecting sequencing analysis output is required. Here using tumour-normal sample pairs from two different types of cancer, chronic lymphocytic leukaemia and medulloblastoma, we conduct a benchmarking exercise within the context of the International Cancer Genome Consortium. We compare sequencing methods, analysis pipelines and validation methods. We show that using PCR-free methods and increasing sequencing depth to ∼ 100 × shows benefits, as long as the tumour:control coverage ratio remains balanced. We observe widely varying mutation call rates and low concordance among analysis pipelines, reflecting the artefact-prone nature of the raw data and lack of standards for dealing with the artefacts. However, we show that, using the benchmark mutation set we have created, many issues are in fact easy to remedy and have an immediate positive impact on mutation detection accuracy. PMID:26647970

  10. LRS data processing methods for detection of lunar subsurface echoes

    NASA Astrophysics Data System (ADS)

    Oshigami, Shoko; Mochizuki, Kengo; Watanabe, Shiho; Watanabe, Toshiki; Yamaguchi, Yasushi; Yamaji, Atsushi; Ono, Takayuki; Kumamoto, Atsushi; Nakagawa, Hiromu; Kobayashi, Takao; Kasahara, Yoshiya

    , KAGUYA- onboard apparatus and airwave from the Earth. Subsurface echoes might be obliterated by these noises and other echoes. In order to detect subsurface echoes in the LRS data, we are currently investigating the data processing methods, including data stacking in the flight direction, contrast enhancement, and the migration technique. Characteristics of LRS data differ considerably between mare and highland regions. We could detect subsurface echoes in mare regions with simple procedure. We stack ten A-scope data in the flight direction in order to suppress random noises in B-scan images. Then we enhance contrast of the B-scan images. As a result, subsurface discontinuities are found at several hundreds meters deep in the mare regions such as Mare Serenitatis. On the other hand, subsurface echoes in highland regions might be hidden by numerous echoes from the surface craters. ‘Clutters' from craters appear as obvious hyperbolic patterns in LRS B-scan images. We apply the migration technique to LRS data for the purpose of suppressing these surface clutters. The migration is a popular technique in seismic refraction surveys to analyze signals from the subsurface interfaces in the Earth. We adopted the migration programs of Seismic Unix (SU) which is a software package for seismic waveform data processing. First, we stacked 10 pulse data and then enhanced amplitude of the echo signals. And second, we perform offset calibration by prepending dummy data to the LRS data. By specifying a time sampling interval, pulse transmission interval, and a propagation velocity of transmitted electromagnetic wave in free space as parameters, each hyperbolic pattern in B-scan images is focused on a point that corresponds to a surface reflector. We conclude that the migration technique is an effective to suppress the hyperbolic clutter patterns and thus to enhance subsurface echoes in LRS B-scan images.

  11. Wavelet Methods Developed to Detect and Control Compressor Stall

    NASA Technical Reports Server (NTRS)

    Le, Dzu K.

    1997-01-01

    A "wavelet" is, by definition, an amplitude-varying, short waveform with a finite bandwidth (e.g., that shown in the first two graphs). Naturally, wavelets are more effective than the sinusoids of Fourier analysis for matching and reconstructing signal features. In wavelet transformation and inversion, all transient or periodic data features (as in compressor-inlet pressures) can be detected and reconstructed by stretching or contracting a single wavelet to generate the matching building blocks. Consequently, wavelet analysis provides many flexible and effective ways to reduce noise and extract signals which surpass classical techniques - making it very attractive for data analysis, modeling, and active control of stall and surge in high-speed turbojet compressors. Therefore, fast and practical wavelet methods are being developed in-house at the NASA Lewis Research Center to assist in these tasks. This includes establishing user-friendly links between some fundamental wavelet analysis ideas and the classical theories (or practices) of system identification, data analysis, and processing.

  12. Improved Method for Detection of Vibrio parahaemolyticus in Seafood

    PubMed Central

    Hara-Kudo, Yukiko; Nishina, Tokuhiro; Nakagawa, Hiroshi; Konuma, Hirotaka; Hasegawa, Junko; Kumagai, Susumu

    2001-01-01

    We have developed a new, effective procedure for detecting Vibrio parahaemolyticus in seafoods using enrichment and plating onto a chromogenic agar medium. Samples were cultured in salt Trypticase soy broth, which is a nonselective medium, and then a portion of the culture was cultured with salt polymyxin broth, which is a selective medium for V. parahaemolyticus. This two-step enrichment was more effective than the one-step enrichment in salt polymyxin broth alone. The enrichment cultures were then plated onto a new chromogenic agar containing substrates for beta-galactosidase. The V. parahaemolyticus colonies developed a purple color on this growth medium that distinguished them from other related bacterial strains. V. parahaemolyticus was isolated more frequently from naturally contaminated seafood samples using the chromogenic agar than thiosulfate citrate bile salts sucrose agar medium, which is currently used for the isolation of V. parahaemolyticus. Our findings suggest that this new enrichment and isolation scheme is more sensitive and accurate for identifying V. parahaemolyticus in seafood samples than previously used methods. PMID:11722939

  13. Updating National Topographic Data Base Using Change Detection Methods

    NASA Astrophysics Data System (ADS)

    Keinan, E.; Felus, Y. A.; Tal, Y.; Zilberstien, O.; Elihai, Y.

    2016-06-01

    The traditional method for updating a topographic database on a national scale is a complex process that requires human resources, time and the development of specialized procedures. In many National Mapping and Cadaster Agencies (NMCA), the updating cycle takes a few years. Today, the reality is dynamic and the changes occur every day, therefore, the users expect that the existing database will portray the current reality. Global mapping projects which are based on community volunteers, such as OSM, update their database every day based on crowdsourcing. In order to fulfil user's requirements for rapid updating, a new methodology that maps major interest areas while preserving associated decoding information, should be developed. Until recently, automated processes did not yield satisfactory results, and a typically process included comparing images from different periods. The success rates in identifying the objects were low, and most were accompanied by a high percentage of false alarms. As a result, the automatic process required significant editorial work that made it uneconomical. In the recent years, the development of technologies in mapping, advancement in image processing algorithms and computer vision, together with the development of digital aerial cameras with NIR band and Very High Resolution satellites, allow the implementation of a cost effective automated process. The automatic process is based on high-resolution Digital Surface Model analysis, Multi Spectral (MS) classification, MS segmentation, object analysis and shape forming algorithms. This article reviews the results of a novel change detection methodology as a first step for updating NTDB in the Survey of Israel.

  14. Improved method for detection of Vibrio parahaemolyticus in seafood.

    PubMed

    Hara-Kudo, Y; Nishina, T; Nakagawa, H; Konuma, H; Hasegawa, J; Kumagai, S

    2001-12-01

    We have developed a new, effective procedure for detecting Vibrio parahaemolyticus in seafoods using enrichment and plating onto a chromogenic agar medium. Samples were cultured in salt Trypticase soy broth, which is a nonselective medium, and then a portion of the culture was cultured with salt polymyxin broth, which is a selective medium for V. parahaemolyticus. This two-step enrichment was more effective than the one-step enrichment in salt polymyxin broth alone. The enrichment cultures were then plated onto a new chromogenic agar containing substrates for beta-galactosidase. The V. parahaemolyticus colonies developed a purple color on this growth medium that distinguished them from other related bacterial strains. V. parahaemolyticus was isolated more frequently from naturally contaminated seafood samples using the chromogenic agar than thiosulfate citrate bile salts sucrose agar medium, which is currently used for the isolation of V. parahaemolyticus. Our findings suggest that this new enrichment and isolation scheme is more sensitive and accurate for identifying V. parahaemolyticus in seafood samples than previously used methods.

  15. Statistical methods for the detection and analysis of radioactive sources

    NASA Astrophysics Data System (ADS)

    Klumpp, John

    We consider four topics from areas of radioactive statistical analysis in the present study: Bayesian methods for the analysis of count rate data, analysis of energy data, a model for non-constant background count rate distributions, and a zero-inflated model of the sample count rate. The study begins with a review of Bayesian statistics and techniques for analyzing count rate data. Next, we consider a novel system for incorporating energy information into count rate measurements which searches for elevated count rates in multiple energy regions simultaneously. The system analyzes time-interval data in real time to sequentially update a probability distribution for the sample count rate. We then consider a "moving target" model of background radiation in which the instantaneous background count rate is a function of time, rather than being fixed. Unlike the sequential update system, this model assumes a large body of pre-existing data which can be analyzed retrospectively. Finally, we propose a novel Bayesian technique which allows for simultaneous source detection and count rate analysis. This technique is fully compatible with, but independent of, the sequential update system and moving target model.

  16. Apparatus and method for detecting flaws in conductive material

    DOEpatents

    Hockey, Ronald L.; Riechers, Douglas M.

    1999-01-01

    The present invention is an improved sensing unit for detecting flaws in conductive material wherein the sensing coil is positioned away from a datum of either the datum point, the datum orientation, or a combination thereof. Position of the sensing coil away from a datum increases sensitivity for detecting flaws having a characteristic volume less than about 1 mm.sup.3, and further permits detection of subsurface flaws. Use of multiple sensing coils permits quantification of flaw area or volume.

  17. Vadose Zone Sampling Methods for Detection of Preferential Pesticides Transport

    NASA Astrophysics Data System (ADS)

    Peranginangin, N.; Richards, B. K.; Steenhuis, T. S.

    2003-12-01

    Leaching of agricultural applied chemicals through the vadose zone is a major cause for the occurrence of agrichemicals in groundwater. Accurate soil water sampling methods are needed to ensure meaningful monitoring results, especially for soils that have significant preferential flow paths. The purpose of this study was to assess the capability and the effectiveness of various soil water sampling methods in detecting preferential transport of pesticides in a strongly-structured silty clay loam (Hudson series) soil. Soil water sampling devices tested were wick pan and gravity pan lysimeters, tile lines, porous ceramic cups, and pipe lysimeters; all installed at 45 to105 cm depth below the ground surface. A reasonable worse-case scenario was tested by applying a simulated rain storm soon after pesticides were sprayed at agronomic rates. Herbicides atrazine (6-chloro-N2-ethyl-N4-isopropyl-1,3,5-triazine-2,4-diamine) and 2,4-D (2,4-dichloro-phenoxyacetic acid) were chosen as model compounds. Chloride (KCl) tracer was used to determine spatial and temporal distribution of non-reactive solute and water as well as a basis for determining the retardation in pesticides movement. Results show that observed pesticide mobility was much greater than would be predicted by uniform flow. Under relatively high soil moisture conditions, gravity and wick pan lysimeters had comparably good collection efficiencies, whereas the wick samplers had an advantage over gravity driven sampler when the soil moisture content was below field capacity. Pipe lysimeters had breakthrough patterns that were similar to pan samplers. At small plot scale, tile line samplers tended to underestimate solute concentration because of water dilution around the samplers. The use of porous cup samplers performed poorly because of their sensitivity to local profile characteristics: only by chance can they intercept and sample the preferential flow paths that are critical to transport. Wick sampler had the least

  18. Statistical methods for detecting periodic fragments in DNA sequence data

    PubMed Central

    2011-01-01

    Background Period 10 dinucleotides are structurally and functionally validated factors that influence the ability of DNA to form nucleosomes, histone core octamers. Robust identification of periodic signals in DNA sequences is therefore required to understand nucleosome organisation in genomes. While various techniques for identifying periodic components in genomic sequences have been proposed or adopted, the requirements for such techniques have not been considered in detail and confirmatory testing for a priori specified periods has not been developed. Results We compared the estimation accuracy and suitability for confirmatory testing of autocorrelation, discrete Fourier transform (DFT), integer period discrete Fourier transform (IPDFT) and a previously proposed Hybrid measure. A number of different statistical significance procedures were evaluated but a blockwise bootstrap proved superior. When applied to synthetic data whose period-10 signal had been eroded, or for which the signal was approximately period-10, the Hybrid technique exhibited superior properties during exploratory period estimation. In contrast, confirmatory testing using the blockwise bootstrap procedure identified IPDFT as having the greatest statistical power. These properties were validated on yeast sequences defined from a ChIP-chip study where the Hybrid metric confirmed the expected dominance of period-10 in nucleosome associated DNA but IPDFT identified more significant occurrences of period-10. Application to the whole genomes of yeast and mouse identified ~ 21% and ~ 19% respectively of these genomes as spanned by period-10 nucleosome positioning sequences (NPS). Conclusions For estimating the dominant period, we find the Hybrid period estimation method empirically to be the most effective for both eroded and approximate periodicity. The blockwise bootstrap was found to be effective as a significance measure, performing particularly well in the problem of period detection in the

  19. Methods for detecting additional genes underlying Alzheimer disease

    SciTech Connect

    Locke, P.A.; Haines, J.L.; Ter-Minassian, M.

    1994-09-01

    Alzheimer`s disease (AD) is a complex inherited disorder with proven genetic heterogeneity. To date, genes on chromosome 21 (APP) and 14 (not yet identified) are associated with early-onset familial AD, while the APOE gene on chromosome 19 is associated with both late onset familial and sporadic AD and early onset sporadic AD. Although these genes likely account for the majority of AD, many familial cases cannot be traced to any of these genes. From a set of 127 late-onset multiplex families screened for APOE, 43 (34%) families have at least one affected individual with no APOE-4 allele, suggesting an alternative genetic etiology. Simulation studies indicated that additional loci could be identified through a genomic screen with a 10 cM sieve on a subset of 21 well documented, non-APOE-4 families. Given the uncertainties in the mode of inheritance, reliance on a single analytical method could result in a missed linkage. Therefore, we have developed a strategy of using multiple overlapping yet complementary methods to detect linkage. These include sib-pair analysis and affected-pedigree-member analysis, neither of which makes assumptions about mode of inheritance, and lod score analysis (using two predefined genetic models). In order for a marker to qualify for follow-up, it must fit at least two of three criteria. These are nominal P values of 0.05 or less for the non-parametric methods, and/or a lod score greater than 1.0. Adjacent markers each fulfilling a single criterion also warrant follow-up. To date, we have screened 61 markers on chromosomes 1, 2, 3, 18, 19, 21, and 22. One marker, D2S163, generated a lod score of 1.06 ({theta} = 0.15) and an APMT statistic of 3.68 (P < 0.001). This region is currently being investigated in more detail. Updated results of this region plus additional screening data will be presented.

  20. Methods, compounds and systems for detecting a microorganism in a sample

    DOEpatents

    Colston, Jr, Bill W.; Fitch, J. Patrick; Gardner, Shea N.; Williams, Peter L.; Wagner, Mark C.

    2016-09-06

    Methods to identify a set of probe polynucleotides suitable for detecting a set of targets and in particular methods for identification of primers suitable for detection of target microorganisms related polynucleotides, set of polynucleotides and compositions, and related methods and systems for detection and/or identification of microorganisms in a sample.

  1. Method of detecting abnormality in a reference crank angle position detection system of an internal combustion engine

    SciTech Connect

    Suzuki, Y.

    1987-05-12

    A method is described of detecting abnormality in a reference crank angle position detection system of a control system for controlling an internal combustion engine. The method comprises a crankshaft, the control system using at least reference pulses generated, respectively, at predetermined crank angles of the crankshaft and detected by the reference crank angle position detection system. Crank angle pulses are generated, respectively, at other predetermined angles of the crankshaft and with a pulse repetition period shorter than that of the reference pulses, for controlling the engine.

  2. Laser spectrum detection methods for substance of Mars surface

    NASA Astrophysics Data System (ADS)

    Zhang, Dan; Xue, Bin; Zhao, Yi-yi

    2014-11-01

    The chemical element and mineral rock's abundance and distribution are the basic material of planetary geology evolution research [1], hence preterit detection for composition of Mars surface substance contains both elements sorts and mineral ingredients. This article introduced new ways to detect Mars elements and mineral components, Laser Induced Breakdown Spectroscopy (LIBS) and Raman Spectroscopy (RS) which have distinct advantages, such as work over a long distance, detect rapidly, accuratly and nondestructively. LIBS and RS both use laser excitation to shoot the substance of Mars exciting new wavelengths. The techniques of LIBS and RS in laboratory are mature, besides the technique of LIBS is being used in MSL (Chemcam) now and RS will be used in ExoMars. Comparing LIBS and RS's detection results with XRF and APXS, Mossbauer spectrometer, these existed Mars surface material detection instruments,and the Infrared spectrometer, Mid-IR, they have more accurate detection results. So LIBS and RS are competent for Mars surface substance detection instead of X-ray spectrometer and Mossbauer spectrometer which were already used in 'Viking 1' and 'Opportunity'. Only accurate detection results about Mars surface substance can lead to scientist's right analysis in inversing geological evolution of the planet.

  3. A rapid method to improve protein detection by indirect ELISA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The enzyme-linked immunosorbant assay (ELISA) is a rapid, high-throughput, quantitative immunoassay for the selective detection of target antigens. The general principle behind an ELISA is antibody mediated capture and detection of an antigen with a measureable substrate. Numerous incarnations of th...

  4. Detection of magnetising inrush current using real time integration method

    NASA Astrophysics Data System (ADS)

    Ling, P. C. Y.; Basak, A.

    1990-01-01

    A technique of predicting magnetising inrush currents in transformers is described. Computed results show an inconsistency in second harmonic decay resulting detection failure while using conventional second harmonic techniques. A new detection scheme using real time integration values of the inrush current is proposed to provide reliable relay operation.

  5. Subsurface Ice Detection via Low Frequency Surface Electromagnetic Method

    NASA Astrophysics Data System (ADS)

    Stillman, D. E.; Grimm, R. E.; Mcginnis, R. N.

    2014-12-01

    The geophysical detection of ice in the Cryosphere is typically conducted by measuring the absence of water. These interpretations can become non-unique in dry soils or in clay- and silt-rich soils that contain significant quantities of unfrozen water. Extensive laboratory measurements of electrical properties were made on permafrost samples as a function of frequency, temperature, and water content. These laboratory measurements show that the amount of ice can be uniquely obtained by measuring a frequency dependence of the electrical properties over a large frequency range (20 kHz - 10 Hz). In addition, the electrical properties of permafrost are temperature dependent, which can allow for an estimate of subsurface temperature. In order to test this approach in the field, we performed field surveys at four locations in Alaska. We used three low frequency electromagnetic methods: Spectral Induced Polarization (SIP: 20 kHz - 10 Hz), Capacively Coupled Resistivity (CCR: OhmMapper - 16.5 kHz), and DC Resistivity (Syscal ~ 8 Hz). At the Cold Regions Research and Engineering Laboratory permafrost tunnel near Fox, AK, we used SIP to measure the average ice concentration of 80 v% and determined the temperature to be -3±1°C by matching survey results to lab data. SIP data acquisition is very slow; therefore, at three sites near Tok, AK, we used CCR to perform reconnaissance of the area. Then SIP and DC resistivity were performed at anomalous areas. The three survey types give very similar absolute resistivity values. We found that while SIP gives the most quantitative results, the frequency dependence from the CCR and DC resistivity surveys is all that are needed to determine ice content in permafrost.

  6. A method of face detection with deep models for patrol videos

    NASA Astrophysics Data System (ADS)

    Jia, Baozhi; Zhu, Ming

    2015-07-01

    Common face detection methods may fail in videos captured by patrol cars for the low resolution and uncooperative situation. We proposed a method to handle this problem with a parts-based deep model. Different parts of human bodies are detected for improving the accuracy of face detection in this method. A deep neural network is used for combining the detections of different parts. Experiments were conducted on two different datasets. The results demonstrate that the proposed method outperforms existing common face detection methods.

  7. Methods for the rapid detection of biological and chemical weapons

    SciTech Connect

    Castro, A.; Hemberger, P.H.; Swanson, B.I.

    1997-08-01

    This is the final report of a one-year, Laboratory-Directed Research and Development (LDRD) project at Los Alamos National Laboratory (LANL). This work undertook the development of technology for the detection of chemical and biological agents. The project consisted of three tasks: (1) modifying a transportable mass spectrometer for the detection of chemical gents; (2) demonstrating the detection of a specific bacterial DNA sequence using a fluorescence-based single- copy gene detector; and (3) upgrading a surface acoustic wave measurement station.

  8. Lipid droplet detection by the cavity perturbation method

    NASA Astrophysics Data System (ADS)

    Blakey, R. T.; Mason, A.; Rolph, C. E.; Bond, G.; Al-Shamma'a, A. I.

    2011-08-01

    There are currently no point-of-care diagnosis strategies available to indicate the presence of neoplasmic growth. This research aims to develop a novel diagnostic strategy based on detecting TAG accumulation in cells. This element of the research is a preliminary experiment to prove the concept of detecting TAG lipid droplets in YEPD media. It was found that a change in mono-unsaturated concentration can be detected by the frequency shift in a resonant cavity. The dielectric constant of TAG vegetable oils was calculated at 2.34-2.39. It was also found that concentrations of lipid droplet can be differentiated up to 5% (v/v).

  9. TMTI Task 1.6 Genetic Engineering Methods and Detection

    SciTech Connect

    Slezak, T; Lenhoff, R; Allen, J; Borucki, M; Vitalis, E; Gardner, S

    2009-12-04

    A large number of GE techniques can be adapted from other microorganisms to biothreat bacteria and viruses. Detection of GE in a microorganism increases in difficulty as the size of the genetic change decreases. In addition to the size of the engineered change, the consensus genomic sequence of the microorganism can impact the difficulty of detecting an engineered change in genomes that are highly variable from strain to strain. This problem will require comprehensive databases of whole genome sequences for more genetically variable biothreat bacteria and viruses. Preliminary work with microarrays for detecting synthetic elements or virulence genes and analytic bioinformatic approaches for whole genome sequence comparison to detect genetic engineering show promise for attacking this difficult problem but a large amount of future work remains.

  10. Determining detection sensitivity and methods for invertebrate sampling

    EPA Science Inventory

    This meeting is intended to communicate Great Lakes invasive species early detection science to state management agencies to assist them in implementing monitoring. My presentation summaries lessons learned concerning invertebrate monitoring in the course of ORD research on earl...

  11. METHODS FOR DETECTION OF CRYPTOSPORIDIUM SP. AND GIARDIA SP.

    EPA Science Inventory

    There have been several waterborne outbreaks of giardiasis caused by infection with Giardia lamblia, and cryptosporidiosis, caused by infection with Cryptosporidium parvum. These outbreaks have created a need to detect these organisms in source and finished drinking water. The pr...

  12. Colour based fire detection method with temporal intensity variation filtration

    NASA Astrophysics Data System (ADS)

    Trambitckii, K.; Anding, K.; Musalimov, V.; Linß, G.

    2015-02-01

    Development of video, computing technologies and computer vision gives a possibility of automatic fire detection on video information. Under that project different algorithms was implemented to find more efficient way of fire detection. In that article colour based fire detection algorithm is described. But it is not enough to use only colour information to detect fire properly. The main reason of this is that in the shooting conditions may be a lot of things having colour similar to fire. A temporary intensity variation of pixels is used to separate them from the fire. These variations are averaged over the series of several frames. This algorithm shows robust work and was realised as a computer program by using of the OpenCV library.

  13. Methods for detection, identification and specification of listerias

    SciTech Connect

    Bochner, Barry

    1992-01-01

    The present invention relates generally to differential carbon source metabolism in the genus Listeria, metabolic, biochemical, immunological and genetic procedures to measure said differential carbon source metabolism and the use of these produces to detect, isolate and/or distinguish species of the genus Listeria as well as detect, isolate and/or distinguish strains of species of Listeria. The present invention also contemplates test kits and enrichment media to facilitate these procedures.

  14. One new method for road data shape change detection

    NASA Astrophysics Data System (ADS)

    Tang, Luliang; Li, Qingquan; Xu, Feng; Chang, Xiaomeng

    2009-10-01

    Similarity is a psychological cognition; this paper defines the Difference Distance and puts forward the Similarity Measuring Model for linear spatial data (SMM-L) based on the integration of the Distance View and the Feature Set View which are the views for similarity cognition. Based on the study of the relationship between the spatial data change and the similarity, a change detection algorithm for linear spatial data is developed, and a test on road data change detection is realized.

  15. GEOPHYSICAL METHODS FOR COAL FIRE DETECTION AND MONITORING

    NASA Astrophysics Data System (ADS)

    Meyer, U.; Gundelach, V.; Vasterling, M.; Lambrecht, A.; Rueter, H.; Lindner, H.

    2009-12-01

    Within the framework of the Sino-German research initiative "Innovative technologies for exploration, extinction and monitoring of coal fires in Northern China" a number of different geophysical methods have been applied to determine their use on coal fire detecting, accompanying the extinguishing processes, controlling of the extinction and finally monitoring the extinction success. It is known that the heating of coal resp. coal host rocks changes its electrical resistivity and magnetic susceptibility. Hence the methods of choice are airborne magnetics and frequency electromagnetics (AEM) for surveying large and inaccessible areas and ground based magnetics, transient electromagnetics (TEM), ground penetrating radar (GPR) and temperature measurements to obtain detailed local information. Ground based and airborne magnetics show positive anomalies on coal fire areas. Susceptibility of sandstone, coal and (burnt) clay samples were determined in-situ. The magnetisation was strikingly high for thermally altered clay and slightly increased for thermally influenced sandstone. They get remanently magnetised according to the earth’s recent magnetic field when cooling down below Curie temperature as the fire propagates. Additionally, at a certain temperature non-magnetic minerals like pyrite chemically react to magnetic minerals like magnetite. Thus the observed magnetic anomalies indicate burnt areas. From ground based magnetics the anomalies were more distinct whereas using an airborne system a larger area and also inaccessible terrain can be surveyed. Performing TEM measurements a change in data curves can be observed where the profiles cross the hot burning zone. Heat and fluid transport included in the burning processes presumably change the permittivity of the rock. The electrical resistivity of thermally influenced coal is strongly decreased. Furthermore, the condensed mineralised process water in the rocks above the burning seams forms a layer of low resistivity

  16. REAL-TIME PCR METHOD TO DETECT ENTEROCOCCUS FAECALIS IN WATER

    EPA Science Inventory

    A 16S rDNA real-time PCR method was developed to detect Enterococcus faecalis in water samples. The dynamic range for cell detection spanned five logs and the detection limit was determined to be 6 cfu/reaction. The assay was capable of detecting E. faecalis cells added to biof...

  17. Comparison of rapid cultural methods for the detection of Salmonella species.

    PubMed

    Margot, H; Stephan, R; O'Mahony, E; Iversen, C

    2013-05-15

    Three newly developed rapid cultural methods (Rapid Salmonella, Precis™ Salmonella, IBISA Salmonella) for the detection of Salmonella spp. were compared to a reference method. All methods performed comparably on inclusivity/exclusivity testing. Similar limits of detection were observed for all methods with milk, cocoa and bouillon matrices. Some tea varieties appeared to disturb the normal color formation of all selective agars tested.

  18. A Real-time Auto-detection Method for Random Telegraph Signal (RTS) Noise Detection in CMOS Active pixel sensors

    NASA Astrophysics Data System (ADS)

    Zheng, R.; Zhao, R.; Ma, Y.; Li, B.; Wei, X.; Wang, J.; Gao, W.; Wei, T.; Gao, D.; Hu, Y.

    2015-07-01

    CMOS Active pixel sensors (CMOS APS) are attractive for use in the innermost layers of charged particle trackers, due to their good tradeoffs among the key performances. However, CMOS APS can be greatly influenced by random telegraph signal (RTS) noise, which can cause particle tracking or energy calculation failures. In-depth research of pixels' RTS behavior stimulates the interest of the methods for RTS noise detection, reconstruction and parameters extraction. In this paper, a real-time auto-detection method is proposed, using real-time Gaussian noise standard deviation as the detection threshold. Experimental results show that, compared with current methods using signal standard deviation as the thresholds, the proposed method is more sensitive in multi-level RTS detection and more effective in the case of RTS noise degradation.

  19. Methods of detection and identificationoc carbon- and nitrogen-containing materials

    DOEpatents

    Karev, Alexander Ivanovich; Raevsky, Valery Georgievich; Dzhalivyan, Leonid Zavenovich; Brothers, Louis Joseph; Wilhide, Larry K

    2013-11-12

    Methods for detecting and identifying carbon- and/or nitrogen-containing materials are disclosed. The methods may comprise detection of photo-nuclear reaction products of nitrogen and carbon to detect and identify the carbon- and/or nitrogen-containing materials.

  20. RNA-Based Methods Increase the Detection of Fecal Bacteria and Fecal Identifiers in Environmental Waters

    EPA Science Inventory

    We evaluated the use of qPCR RNA-based methods in the detection of fecal bacteria in environmental waters. We showed that RNA methods can increase the detection of fecal bacteria in multiple water matrices. The data suggest that this is a viable alternative for the detection of a...

  1. Eddy current probe and method for flaw detection in metals

    DOEpatents

    Watjen, J.P.

    1987-06-23

    A flaw detecting system is shown which includes a probe having a pair of ferrite cores with in-line gaps in close proximity to each other. An insulating, non-magnetic, non-conducting holder fills the gaps and supports the ferrite cores in a manner such that the cores form a generally V-shape. Each core is provided with an excitation winding and a detection winding. The excitation windings are connected in series or parallel with an rf port for connection thereof to a radio frequency source. The detection windings, which are differentially wound, are connected in series circuit to a detector port for connection to a voltage measuring instrument. The ferrite cores at the in-line gaps directly engage the metal surface of a test piece, and the probe is scanned along the test piece. In the presence of a flaw in the metal surface the detection winding voltages are unbalanced, and the unbalance is detected by the voltage measuring instrument. The insulating holder is provided with a profile which conforms to that of a prominent feature of the test piece to facilitate movement of the probe along the feature, typically an edge or a corner. 9 figs.

  2. Automated calibration methods for robotic multisensor landmine detection

    NASA Astrophysics Data System (ADS)

    Keranen, Joe G.; Miller, Jonathan; Schultz, Gregory; Topolosky, Zeke

    2007-04-01

    Both force protection and humanitarian demining missions require efficient and reliable detection and discrimination of buried anti-tank and anti-personnel landmines. Widely varying surface and subsurface conditions, mine types and placement, as well as environmental regimes challenge the robustness of the automatic target recognition process. In this paper we present applications created for the U.S. Army Nemesis detection platform. Nemesis is an unmanned rubber-tracked vehicle-based system designed to eradicate a wide variety of anti-tank and anti-personnel landmines for humanitarian demining missions. The detection system integrates advanced ground penetrating synthetic aperture radar (GPSAR) and electromagnetic induction (EMI) arrays, highly accurate global and local positioning, and on-board target detection/classification software on the front loader of a semi-autonomous UGV. An automated procedure is developed to estimate the soil's dielectric constant using surface reflections from the ground penetrating radar. The results have implications not only for calibration of system data acquisition parameters, but also for user awareness and tuning of automatic target recognition detection and discrimination algorithms.

  3. New detection methods of growth hormone and growth factors.

    PubMed

    Bidlingmaier, Martin

    2012-01-01

    Human growth hormone (GH), but also GH related growth factors like the insulin-like growth factor-1 (IGF-1) are known to be abused in sports. Although the scientific evidence supporting a distinct effect of GH on performance in healthy trained subjects is limited, it has been repeatedly found with athletes or trainers, and the recent introduction of a first test to detect GH doping has led to a number of positive cases. Currently, there is no test for the detection of IGF-1 introduced worldwide, but confiscation of the drug from sports teams can be taken as indirect evidence for its abuse. The major biochemical difficulty for the detection of GH is that the recombinant form is identical in physicochemical properties to the endogenous GH secreted by the pituitary gland. Furthermore, the very short half-life of GH in circulation inherently shortens the window of opportunity where the drug can be detected. Two strategies have been followed for more than a decade to develop a test to detect the application of recombinant GH: the marker approach, which is based on the elevation of GH-dependent markers above the level seen under physiological conditions evoked by administration of recombinant GH, and the isoform approach, which is based on a change in the pattern of GH isoforms in circulation following the injection of recombinant GH.

  4. Eddy current probe and method for flaw detection in metals

    DOEpatents

    Watjen, John P.

    1987-06-23

    A flaw detecting system is shown which includes a probe having a pair of ferrite cores with in-line gaps in close proximity to each other. An insulating, non-magnetic, non-conducting holder fills the gaps and supports the ferrite cores in a manner such that the cores form a generally V-shape. Each core is provided with an excitation winding and a detection winding. The excitation windings are connected in series or parallel with an rf port for connection thereof to a radio frequency source. The detection windings, which are differentially wound, are connected in series circuit to a detector port for connection to a voltage measuring instrument. The ferrite cores at the in-line gaps directly engage the metal surface of a test piece, and the probe is scanned along the test piece. In the presence of a flaw in the metal surface the detection winding voltages are unbalanced, and the unbalance is detected by the voltage measuring instrument. The insulating holder is provided with a profile which conforms to that of a prominent feature of the test piece to facilitate movement of the probe along the feature, typically an edge or a corner.

  5. New method for gravitational wave detection with atomic sensors.

    PubMed

    Graham, Peter W; Hogan, Jason M; Kasevich, Mark A; Rajendran, Surjeet

    2013-04-26

    Laser frequency noise is a dominant noise background for the detection of gravitational waves using long-baseline optical interferometry. Amelioration of this noise requires near simultaneous strain measurements on more than one interferometer baseline, necessitating, for example, more than two satellites for a space-based detector or two interferometer arms for a ground-based detector. We describe a new detection strategy based on recent advances in optical atomic clocks and atom interferometry which can operate at long baselines and which is immune to laser frequency noise. Laser frequency noise is suppressed because the signal arises strictly from the light propagation time between two ensembles of atoms. This new class of sensor allows sensitive gravitational wave detection with only a single baseline. This approach also has practical applications in, for example, the development of ultrasensitive gravimeters and gravity gradiometers.

  6. New method for gravitational wave detection with atomic sensors.

    PubMed

    Graham, Peter W; Hogan, Jason M; Kasevich, Mark A; Rajendran, Surjeet

    2013-04-26

    Laser frequency noise is a dominant noise background for the detection of gravitational waves using long-baseline optical interferometry. Amelioration of this noise requires near simultaneous strain measurements on more than one interferometer baseline, necessitating, for example, more than two satellites for a space-based detector or two interferometer arms for a ground-based detector. We describe a new detection strategy based on recent advances in optical atomic clocks and atom interferometry which can operate at long baselines and which is immune to laser frequency noise. Laser frequency noise is suppressed because the signal arises strictly from the light propagation time between two ensembles of atoms. This new class of sensor allows sensitive gravitational wave detection with only a single baseline. This approach also has practical applications in, for example, the development of ultrasensitive gravimeters and gravity gradiometers. PMID:23679702

  7. Ultrafast laser based coherent control methods for explosives detection

    SciTech Connect

    Moore, David Steven

    2010-12-06

    The detection of explosives is a notoriously difficult problem, especially at stand-off, due to their (generally) low vapor pressure, environmental and matrix interferences, and packaging. We are exploring Optimal Dynamic Detection of Explosives (ODD-Ex), which exploits the best capabilities of recent advances in laser technology and recent discoveries in optimal shaping of laser pulses for control of molecular processes to significantly enhance the standoff detection of explosives. The core of the ODD-Ex technique is the introduction of optimally shaped laser pulses to simultaneously enhance sensitivity to explosives signatures while dramatically improving specificity, particularly against matrix materials and background interferences. These goals are being addressed by operating in an optimal non-linear fashion, typically with a single shaped laser pulse inherently containing within it coherently locked control and probe subpulses. Recent results will be presented.

  8. Ensemble method: Community detection based on game theory

    NASA Astrophysics Data System (ADS)

    Zhang, Xia; Xia, Zhengyou; Xu, Shengwu; Wang, J. D.

    2014-08-01

    Timely and cost-effective analytics over social network has emerged as a key ingredient for success in many businesses and government endeavors. Community detection is an active research area of relevance to analyze online social network. The problem of selecting a particular community detection algorithm is crucial if the aim is to unveil the community structure of a network. The choice of a given methodology could affect the outcome of the experiments because different algorithms have different advantages and depend on tuning specific parameters. In this paper, we propose a community division model based on the notion of game theory, which can combine advantages of previous algorithms effectively to get a better community classification result. By making experiments on some standard dataset, it verifies that our community detection model based on game theory is valid and better.

  9. Chemical mutagens: principles and methods for their detection

    SciTech Connect

    de Serres, F.J.

    1984-01-01

    This book discusses the development and validation of short-term assays designed to detect the mutagenic effects of environmental chemicals. Topics considered include the grasshopper neuroblast short-term assay for evaluating the effects of environmental chemicals on chromosomes and cell kinetics, a comparison of the mutagenic responses of lung-derived and skin-derived human diploid fibroblast populations, the L-arabinose resistance test with Salmonella typhimurium, the Bacillus subtilis multigene sporulation test for the detection of environmental mutagens, the L5178Y/TK gene mutation assay system, the induction of bacteriophage lambda by DNA-interacting chemicals, the granuloma pouch assay, the use of multiply marked Escherichia coli K12 strains in the host-mediated assay, and the detection of mutagens in human feces as an approach to the discovery of causes of colon cancer.

  10. A Hybrid Vehicle Detection Method Based on Viola-Jones and HOG + SVM from UAV Images.

    PubMed

    Xu, Yongzheng; Yu, Guizhen; Wang, Yunpeng; Wu, Xinkai; Ma, Yalong

    2016-08-19

    A new hybrid vehicle detection scheme which integrates the Viola-Jones (V-J) and linear SVM classifier with HOG feature (HOG + SVM) methods is proposed for vehicle detection from low-altitude unmanned aerial vehicle (UAV) images. As both V-J and HOG + SVM are sensitive to on-road vehicles' in-plane rotation, the proposed scheme first adopts a roadway orientation adjustment method, which rotates each UAV image to align the roads with the horizontal direction so the original V-J or HOG + SVM method can be directly applied to achieve fast detection and high accuracy. To address the issue of descending detection speed for V-J and HOG + SVM, the proposed scheme further develops an adaptive switching strategy which sophistically integrates V-J and HOG + SVM methods based on their different descending trends of detection speed to improve detection efficiency. A comprehensive evaluation shows that the switching strategy, combined with the road orientation adjustment method, can significantly improve the efficiency and effectiveness of the vehicle detection from UAV images. The results also show that the proposed vehicle detection method is competitive compared with other existing vehicle detection methods. Furthermore, since the proposed vehicle detection method can be performed on videos captured from moving UAV platforms without the need of image registration or additional road database, it has great potentials of field applications. Future research will be focusing on expanding the current method for detecting other transportation modes such as buses, trucks, motors, bicycles, and pedestrians.

  11. A Hybrid Vehicle Detection Method Based on Viola-Jones and HOG + SVM from UAV Images

    PubMed Central

    Xu, Yongzheng; Yu, Guizhen; Wang, Yunpeng; Wu, Xinkai; Ma, Yalong

    2016-01-01

    A new hybrid vehicle detection scheme which integrates the Viola-Jones (V-J) and linear SVM classifier with HOG feature (HOG + SVM) methods is proposed for vehicle detection from low-altitude unmanned aerial vehicle (UAV) images. As both V-J and HOG + SVM are sensitive to on-road vehicles’ in-plane rotation, the proposed scheme first adopts a roadway orientation adjustment method, which rotates each UAV image to align the roads with the horizontal direction so the original V-J or HOG + SVM method can be directly applied to achieve fast detection and high accuracy. To address the issue of descending detection speed for V-J and HOG + SVM, the proposed scheme further develops an adaptive switching strategy which sophistically integrates V-J and HOG + SVM methods based on their different descending trends of detection speed to improve detection efficiency. A comprehensive evaluation shows that the switching strategy, combined with the road orientation adjustment method, can significantly improve the efficiency and effectiveness of the vehicle detection from UAV images. The results also show that the proposed vehicle detection method is competitive compared with other existing vehicle detection methods. Furthermore, since the proposed vehicle detection method can be performed on videos captured from moving UAV platforms without the need of image registration or additional road database, it has great potentials of field applications. Future research will be focusing on expanding the current method for detecting other transportation modes such as buses, trucks, motors, bicycles, and pedestrians. PMID:27548179

  12. A Hybrid Vehicle Detection Method Based on Viola-Jones and HOG + SVM from UAV Images.

    PubMed

    Xu, Yongzheng; Yu, Guizhen; Wang, Yunpeng; Wu, Xinkai; Ma, Yalong

    2016-01-01

    A new hybrid vehicle detection scheme which integrates the Viola-Jones (V-J) and linear SVM classifier with HOG feature (HOG + SVM) methods is proposed for vehicle detection from low-altitude unmanned aerial vehicle (UAV) images. As both V-J and HOG + SVM are sensitive to on-road vehicles' in-plane rotation, the proposed scheme first adopts a roadway orientation adjustment method, which rotates each UAV image to align the roads with the horizontal direction so the original V-J or HOG + SVM method can be directly applied to achieve fast detection and high accuracy. To address the issue of descending detection speed for V-J and HOG + SVM, the proposed scheme further develops an adaptive switching strategy which sophistically integrates V-J and HOG + SVM methods based on their different descending trends of detection speed to improve detection efficiency. A comprehensive evaluation shows that the switching strategy, combined with the road orientation adjustment method, can significantly improve the efficiency and effectiveness of the vehicle detection from UAV images. The results also show that the proposed vehicle detection method is competitive compared with other existing vehicle detection methods. Furthermore, since the proposed vehicle detection method can be performed on videos captured from moving UAV platforms without the need of image registration or additional road database, it has great potentials of field applications. Future research will be focusing on expanding the current method for detecting other transportation modes such as buses, trucks, motors, bicycles, and pedestrians. PMID:27548179

  13. System and method for automated object detection in an image

    DOEpatents

    Kenyon, Garrett T.; Brumby, Steven P.; George, John S.; Paiton, Dylan M.; Schultz, Peter F.

    2015-10-06

    A contour/shape detection model may use relatively simple and efficient kernels to detect target edges in an object within an image or video. A co-occurrence probability may be calculated for two or more edge features in an image or video using an object definition. Edge features may be differentiated between in response to measured contextual support, and prominent edge features may be extracted based on the measured contextual support. The object may then be identified based on the extracted prominent edge features.

  14. Detecting recurrent bladder cancer: new methods and biomarkers.

    PubMed

    Ross, J S; Cohen, M B

    2001-05-01

    In this review, a series of biomarkers and molecular assays are compared with conventional urothelial cytology in their ability to detect recurrent bladder cancer. The tests considered in detail include the BTA test, NMP 22 test, DNA ploidy measurements, telomerase determinations and microsatellite instability assays. Although all of these measurements show some degree of improvement for cancer detection, the microsatellite instability assay shows the highest sensitivity and specificity. Additional biomarkers considered in the review include bladder cancer tumor antigens, growth factors, cell adhesion molecules and various molecular markers including cell cycle regulatory genes and p53 mutations.

  15. Method for detecting pathogens attached to specific antibodies

    DOEpatents

    Miles, Robin R.; Venkateswaran, Kodumudi S.; Fuller, Christopher K.

    2005-01-25

    The use of impedance measurements to detect the presence of pathogens attached to antibody-coated beads. In a fluidic device antibodies are immobilized on a surface of a patterned interdigitated electrode. Pathogens in a sample fluid streaming past the electrode attach to the immobilized antibodies, which produces a change in impedance between two adjacent electrodes, which impedance change is measured and used to detect the presence of a pathogen. To amplify the signal, beads coated with antibodies are introduced and the beads would stick to the pathogen causing a greater change in impedance between the two adjacent electrodes.

  16. Are adequate methods available to detect protist parasites on fresh produce?

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Human parasitic protists such as Cryptosporidium, Giardia and microsporidia contaminate a variety of fresh produce worldwide. Existing detection methods lack sensitivity and specificity for most foodborne parasites. Furthermore, detection has been problematic because these parasites adhere tenacious...

  17. Automated Detection of Solar Loops by the Oriented Connectivity Method

    NASA Technical Reports Server (NTRS)

    Lee, Jong Kwan; Newman, Timothy S.; Gary, G. Allen

    2004-01-01

    An automated technique to segment solar coronal loops from intensity images of the Sun s corona is introduced. It exploits physical characteristics of the solar magnetic field to enable robust extraction from noisy images. The technique is a constructive curve detection approach, constrained by collections of estimates of the magnetic fields orientation. Its effectiveness is evaluated through experiments on synthetic and real coronal images.

  18. Subvisual cirrus detection via a multi-spectral decomposition method

    NASA Technical Reports Server (NTRS)

    Schmidt, Eric O.; Faust, Nickolaus; Baum, Bryan

    1990-01-01

    Lidar data collected on September 15, 1988 over Dayton (Ohio) were synchronized with NOAA satellite observations in order to investigate the feasibility of discriminating between observations of subvisual cirrus, other cirrus, and clear sky. It is concluded that the detection of subvisual cirrus currently requires 'ground-truth' information, such as lidar measurements, for cloud height determinations and for verification.

  19. New sensitive detection method for lectin hemagglutination using microscopy.

    PubMed

    Adamová, Lenka; Malinovská, Lenka; Wimmerová, Michaela

    2014-10-01

    The blood group system AB0 is determined by the composition of terminal oligosaccharides on red blood cells. Thanks to this structural feature, these groups can be recognized by saccharide-recognizing compounds. Lectins are proteins that are able to reversibly bind saccharide structures. They generally occur as multimers and are known as hemagglutination agents. Hemagglutination is a process in which blood cells are cross-linked via multivalent molecules. Apart from lectins, hemagglutination can also be caused by antibodies or viruses. A hemagglutination assay is commonly used for the detection of multivalent molecules that recognize blood cells, in order to search for their sugar specificity. It is traditionally performed on a microtiter plate, where the lectin solution is serially diluted and the lowest concentration of lectin causing agglutination is detected. This experimental set-up is utilized further for testing lectin specificity via a hemagglutination inhibition assay. We have developed a new way of detecting hemagglutination using microscopy, which was tested on purified lectins as well as cell lysates. Hemagglutination was performed on a microscope slide directly and detected using a microscope. Comparison with the standard hemagglutination assay using microtiter plates revealed that microscopic approach is faster and more robust and allows fast determination of lectin activities immediately in bacterial cytosols.

  20. Bioluminescent bioreporter integrated circuit devices and methods for detecting ammonia

    DOEpatents

    Simpson, Michael L [Knoxville, TN; Paulus, Michael J [Knoxville, TN; Sayler, Gary S [Blaine, TN; Applegate, Bruce M [West Lafayette, IN; Ripp, Steven A [Knoxville, TN

    2007-04-24

    Monolithic bioelectronic devices for the detection of ammonia includes a microorganism that metabolizes ammonia and which harbors a lux gene fused with a heterologous promoter gene stably incorporated into the chromosome of the microorganism and an Optical Application Specific Integrated Circuit (OASIC). The microorganism is generally a bacterium.

  1. Comparison of US and EU Salmonella detection methods

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sampling protocols for detecting Salmonella on poultry differ among countries. In the United States, the U. S. Dept. of Agriculture Food Safety and Inspection Service dictates that whole broiler carcasses should be rinsed with 400 mL of 1% buffered peptone water and 30 mL of this be analyzed, where...

  2. Method for detecting radiation dose utilizing thermoluminescent material

    DOEpatents

    Miller, Steven D.; McDonald, Joseph C.; Eichner, Fred N.; Durham, James S.

    1992-01-01

    The amount of ionizing radiation to which a thermoluminescent material has been exposed is determined by first cooling the thermoluminescent material and then optically stimulating the thermoluminescent material by exposure to light. Visible light emitted by the thermoluminescent material as it is allowed to warm up to room temperature is detected and counted. The thermoluminescent material may be annealed by exposure to ultraviolet light.

  3. A sensitive method for detecting and genotyping Cryptosporidium parvum oocysts

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cryptosporidium parvum oocysts represent a considerable health risk to humans and animals because the parasite has a low infectious dose and usually exists in low numbers in environmental samples, which makes detection problematic. The purpose of this study was to evaluate Cryspovirus as a target f...

  4. Overtaking Vehicle Detection Method and Its Implementation Using IMAPCAR Highly Parallel Image Processor

    NASA Astrophysics Data System (ADS)

    Sakurai, Kazuyuki; Kyo, Shorin; Okazaki, Shin'ichiro

    This paper describes the real-time implementation of a vision-based overtaking vehicle detection method for driver assistance systems using IMAPCAR, a highly parallel SIMD linear array processor. The implemented overtaking vehicle detection method is based on optical flows detected by block matching using SAD and detection of the flows' vanishing point. The implementation is done efficiently by taking advantage of the parallel SIMD architecture of IMAPCAR. As a result, video-rate (33 frames/s) implementation could be achieved.

  5. [Detection of norovirus RNA in bivalve molluscs by using bacteria-culture-employed method (A3T method)].

    PubMed

    Akiba, Tetsuya; Tanaka, Tatsuya; Nagano, Miyuki; Mori, Kohji; Hayashi, Yukinao; Obata, Hiromi; Chiba, Takashi; Ikuta, Yasuhisa; Kamiya, Yoriko; Nakama, Akiko; Hosaka, Mitsugu; Kai, Akemi

    2010-01-01

    Norovirus (NV) RNA has rarely been detected in foods despite the use of highly sensitive methods such as RT-PCR and real-time RT-PCR. In the modified method (A3T method) reported previously, a bacterial culture process was introduced into the standard protocol for NV detection to remove some inhibitor(s) present in food ingredients. To confirm the efficiency of the A3T method and to examine NV contamination in bivalve molluscs, we tried to detect NV RNA in bivalve molluscs on the market and in oyster samples associated with foodborne outbreaks by using the standard method and the A3T method. NV RNAs were detected in 20 samples (18.0%) of 111 bivalve molluscs, including oysters, on the market by use of the A3T method, while only one sample (0.9%) was positive according to the standard method. NV RNA was also detected in 10 of 35 oyster samples related to foodborne outbreaks by the A3T method. Those results show that the A3T method is suitable for the detection of NV in bivalve molluscs in general laboratories.

  6. Towards standard methods for the detection of Cryptosporidium parvum on lettuce and raspberries. Part 1: development and optimization of methods.

    PubMed

    Cook, N; Paton, C A; Wilkinson, N; Nichols, R A B; Barker, K; Smith, H V

    2006-06-15

    No standard method is available for detecting protozoan parasites on foods such as soft fruit and salad vegetables. We report on optimizing methods for detecting Cryptosporidium parvum on lettuce and raspberries. These methods are based on four basic stages: extraction of oocysts from the foodstuffs, concentration of the extract and separation of the oocysts from food materials, staining of the oocysts to allow their visualization, and identification of oocysts by microscopy. The concentration and separation steps are performed by centrifugation, followed by immunomagnetic separation using proprietary kits. Oocyst staining is also performed using proprietary reagents. The performance parameters of the extraction steps were extensively optimized, using artificially contaminated samples. The fully developed methods were tested several times to determine their reliability. The method to detect C. parvum on lettuce recovered 59.0+/-12.0% (n=30) of artificially contaminated oocysts. The method to detect C. parvum on raspberries recovered 41.0+/-13.0% (n=30) of artificially contaminated oocysts. PMID:16529835

  7. Method, memory media and apparatus for detection of grid disconnect

    DOEpatents

    Ye, Zhihong; Du, Pengwei

    2008-09-23

    A phase shift procedure for detecting a disconnect of a power grid from a feeder that is connected to a load and a distributed generator. The phase shift procedure compares a current phase shift of the output voltage of the distributed generator with a predetermined threshold and if greater, a command is issued for a disconnect of the distributed generator from the feeder. To extend the range of detection, the phase shift procedure is used when a power mismatch between the distributed generator and the load exceeds a threshold and either or both of an under/over frequency procedure and an under/over voltage procedure is used when any power mismatch does not exceed the threshold.

  8. A Review of Imaging Methods for Prostate Cancer Detection

    PubMed Central

    Sarkar, Saradwata; Das, Sudipta

    2016-01-01

    Imaging is playing an increasingly important role in the detection of prostate cancer (PCa). This review summarizes the key imaging modalities—multiparametric ultrasound (US), multiparametric magnetic resonance imaging (MRI), MRI–US fusion imaging, and positron emission tomography (PET) imaging—used in the diagnosis and localization of PCa. Emphasis is laid on the biological and functional characteristics of tumors that rationalize the use of a specific imaging technique. Changes to anatomical architecture of tissue can be detected by anatomical grayscale US and T2-weighted MRI. Tumors are known to progress through angiogenesis—a fact exploited by Doppler and contrast-enhanced US and dynamic contrast-enhanced MRI. The increased cellular density of tumors is targeted by elastography and diffusion-weighted MRI. PET imaging employs several different radionuclides to target the metabolic and cellular activities during tumor growth. Results from studies using these various imaging techniques are discussed and compared. PMID:26966397

  9. New method to detect organic nanoparticles in live tissue

    NASA Astrophysics Data System (ADS)

    Fixler, Dror; Yariv, Inbar

    2015-03-01

    In recent years, infiltrating materials into the human body has become a great challenge many researches are facing. In medicine and cosmetics today, there are materials which are administrated to patients by injection only. The main challenge with topical medication is penetrating the skin barrier. The skin is an effective barrier between the body and the outside environment, which prevents foreign materials entering the body easily. However, reducing the size of the desired materials might help their skin penetration ability. Recently nanoparticles (NPs) are being evaluated for use in many fields like chemistry, biology, medicine, physics and optics. The technique used in this work for forming organic NPs (ONPs) is the application of sonic waves to an aqueous solution, known as sonochemistry. To investigate the physical penetration depth of ONPs into the human body, we first developed a novel optical technique for detecting NPs within tissues. The detection of NPs is done by the extraction and investigation of the reemitted light phase.

  10. Method and device for detecting leaks from pipelines

    SciTech Connect

    Murphy, R.J.

    1983-05-31

    To detect leaks from pipelines carrying fluids, especially oil, light is transmitted through a fibre-optic held in proximity with the pipeline. The fibre-optic is surrounded by a medium of which the refractive index is altered by the influence of the leaked fluid. In a preferred embodiment the medium is a silicone rubber (4) of which the refractive index is normally lower than that of a quartz fibre optic (3), but of which the index increases to that of the quartz or above when oil (7) soaks into it through a permeable cladding (1) and elastomeric protective layer (2), thus rendering the fibre optic non-internally-reflective so that light (6) is absorbed. Control means linked to a light receiver detect that change and the position of the leak is located to within the length of the optic. In another embodiment the medium is a liquid which is expelled from around the optic by the action of leaked fluid.

  11. Circuitry, systems and methods for detecting magnetic fields

    SciTech Connect

    Kotter, Dale K; Spencer, David F; Roybal, Lyle G; Rohrbaugh, David T

    2010-09-14

    Circuitry for detecting magnetic fields includes a first magnetoresistive sensor and a second magnetoresistive sensor configured to form a gradiometer. The circuitry includes a digital signal processor and a first feedback loop coupled between the first magnetoresistive sensor and the digital signal processor. A second feedback loop which is discrete from the first feedback loop is coupled between the second magnetoresistive sensor and the digital signal processor.

  12. Method and an apparatus for detecting ionizable substance

    NASA Technical Reports Server (NTRS)

    McElroy, James F. (Inventor); Smith, William (Inventor)

    1992-01-01

    The amount of ionizable substance within a stream can be continuously monitored through the use of an ionizable substance detector. The substance is ionized at an electrode producing ions and free electrons. The ions are transported across an ion exchange membrane, while the free electrons flow through a power source. The current, produced by the electrons, is proportional to the amount of substance in the stream. Continuous monitoring can be useful in early detection of problems, or system fluctuations.

  13. A method for detecting structural deterioration in bridges

    NASA Technical Reports Server (NTRS)

    Cole, H. A., Jr.; Reed, R. E., Jr.

    1974-01-01

    The problem of detecting deterioration in bridge structures is studied with the use of Randomdec analysis. Randomdec signatures, derived from the ambient bridge vibrations in the acoustic range, were obtained for a girder bridge over a period of a year to show the insensitivity of the signatures to environmental changes. A laboratory study was also conducted to show the sensitivity of signatures to fatigue cracks on the order of a centimeter in length in steel beams.

  14. Method for detecting radiation dose utilizing thermoluminescent material

    DOEpatents

    Miller, Steven D.; McDonald, Joseph C.; Eichner, Fred N.; Tomeraasen, Paul L.

    1991-01-01

    The amount of ionizing radiation to which a thermoluminescent material has been exposed is determined by first cooling the thermoluminescent material to a cryogenic temperature. The thermoluminescent material is then optically stimulated by exposure to ultraviolet light. Visible light emitted by the thermoluminescent material as it is allowed to warm up to room temperature is detected and counted. The thermoluminescent material may be annealed by exposure to ultraviolet light.

  15. Method for detecting radiation dose utilizing thermoluminescent material

    DOEpatents

    Miller, S.D.; McDonald, J.C.; Eichner, F.N.; Durham, J.S.

    1992-08-04

    The amount of ionizing radiation to which a thermoluminescent material has been exposed is determined by first cooling the thermoluminescent material and then optically stimulating the thermoluminescent material by exposure to light. Visible light emitted by the thermoluminescent material as it is allowed to warm up to room temperature is detected and counted. The thermoluminescent material may be annealed by exposure to ultraviolet light. 5 figs.

  16. Method and apparatus for phase for and amplitude detection

    DOEpatents

    Cernosek, Richard W.; Frye, Gregory C.; Martin, Stephen J.

    1998-06-09

    A new class of techniques been developed which allow inexpensive application of SAW-type chemical sensor devices while retaining high sensitivity (ppm) to chemical detection. The new techniques do not require that the sensor be part of an oscillatory circuit, allowing large concentrations of, e.g., chemical vapors in air, to be accurately measured without compromising the capacity to measure trace concentrations. Such devices have numerous potential applications in environmental monitoring, from manufacturing environments to environmental restoration.

  17. Method and apparatus for phase and amplitude detection

    DOEpatents

    Cernosek, R.W.; Frye, G.C.; Martin, S.J.

    1998-06-09

    A new class of techniques has been developed which allow inexpensive application of SAW-type chemical sensor devices while retaining high sensitivity (ppm) to chemical detection. The new techniques do not require that the sensor be part of an oscillatory circuit, allowing large concentrations of, e.g., chemical vapors in air, to be accurately measured without compromising the capacity to measure trace concentrations. Such devices have numerous potential applications in environmental monitoring, from manufacturing environments to environmental restoration. 12 figs.

  18. Thermographic Methods of Detecting Insulation Voids in Large Cryogenic Tanks

    NASA Technical Reports Server (NTRS)

    Arens, Ellen

    2010-01-01

    Four very large (900Kgal) cryogenic liquid hydrogen and oxygen storage tanks at Kennedy Space Center's LC-39 launch pads were constructed in 1965 to support the Apollo/Saturn V Program and continue to support the Space Shuttle Program. These double-walled spherical tanks with powdered insulation in the annular region, have received minimal refurbishment or even inspection over the years. As the Shuttle Program comes to an end we now have the time to perform limited refurbishment. Thermography has been used to monitor the state of insulation as one of the four tanks was drained of cryogen and warmed to ambient temperatures. An anomalous region of insulation detected previously with thermography was confirmed by visual inspections during this period. Thermal models and a comparison of images from the cold and warm tanks suggests that the anomalous region can be detected even without cryogen in the tank. The ability to detect and correct probable insulation voids prior to filling with cryogenic fluid can provide significant cost savings by reducing commodity boil-off over many years of use.

  19. Wavelet-based acoustic emission detection method with adaptive thresholding

    NASA Astrophysics Data System (ADS)

    Menon, Sunil; Schoess, Jeffrey N.; Hamza, Rida; Busch, Darryl

    2000-06-01

    Reductions in Navy maintenance budgets and available personnel have dictated the need to transition from time-based to 'condition-based' maintenance. Achieving this will require new enabling diagnostic technologies. One such technology, the use of acoustic emission for the early detection of helicopter rotor head dynamic component faults, has been investigated by Honeywell Technology Center for its rotor acoustic monitoring system (RAMS). This ambitious, 38-month, proof-of-concept effort, which was a part of the Naval Surface Warfare Center Air Vehicle Diagnostics System program, culminated in a successful three-week flight test of the RAMS system at Patuxent River Flight Test Center in September 1997. The flight test results demonstrated that stress-wave acoustic emission technology can detect signals equivalent to small fatigue cracks in rotor head components and can do so across the rotating articulated rotor head joints and in the presence of other background acoustic noise generated during flight operation. This paper presents the results of stress wave data analysis of the flight-test dataset using wavelet-based techniques to assess background operational noise vs. machinery failure detection results.

  20. Detection method for dissociation of multiple-charged ions

    DOEpatents

    Smith, Richard D.; Udseth, Harold R.; Rockwood, Alan L.

    1991-01-01

    Dissociations of multiple-charged ions are detected and analyzed by charge-separation tandem mass spectrometry. Analyte molecules are ionized to form multiple-charged parent ions. A particular charge parent ion state is selected in a first-stage mass spectrometer and its mass-to-charge ratio (M/Z) is detected to determine its mass and charge. The selected parent ions are then dissociated, each into a plurality of fragments including a set of daughter ions each having a mass of at least one molecular weight and a charge of at least one. Sets of daughter ions resulting from the dissociation of one parent ion (sibling ions) vary in number but typically include two to four ions, one or more multiply-charged. A second stage mass spectrometer detects mass-to-charge ratio (m/z) of the daughter ions and a temporal or temporo-spatial relationship among them. This relationship is used to correlate the daughter ions to determine which (m/z) ratios belong to a set of sibling ions. Values of mass and charge of each of the sibling ions are determined simultaneously from their respective (m/z) ratios such that the sibling ion charges are integers and sum to the parent ion charge.

  1. Assessment criteria and approaches for rapid detection methods to be used in the food industry.

    PubMed

    Wiedmann, Martin; Wang, Siyun; Post, Laurie; Nightingale, Kendra

    2014-04-01

    The number of commercially available kits and methods for rapid detection of foodborne pathogens continues to increase at a considerable pace, and the diversity of methods and assay formats is reaching a point where it is very difficult even for experts to weigh the advantages and disadvantages of different methods and to decide which methods to choose for a certain testing need. Although a number of documents outline quantitative criteria that can be used to evaluate different detection methods (e.g., exclusivity and inclusivity), a diversity of criteria is typically used by industry to select specific methods that are used for pathogen detection. This article is intended to provide an overall outline of criteria that the food industry can use to evaluate new rapid detection methods, with a specific focus on nucleic acid-based detection methods.

  2. Methods for detection of methyl-CpG dinucleotides

    SciTech Connect

    Dunn, John J

    2013-11-26

    The invention provides methods for enriching methyl-CpG sequences from a DNA sample. The method makes use of conversion of cytosine residues to uracil under conditions in which methyl-cytosine residues are preserved. Additional methods of the invention enable to preservation of the context of me-CpG dinucleotides. The invention also provides a recombinant, full length and substantially pure McrA protein (rMcrA) for binding and isolation of DNA fragments containing the sequence 5'-C.sup.MeCpGG-3'. Methods for making and using the rMcrA protein, and derivatives thereof are provided.

  3. Methods for detection of methyl-CpG dinucleotides

    SciTech Connect

    Dunn, John J.

    2013-01-29

    The invention provides methods for enriching methyl-CpG sequences from a DNA sample. The method makes use of conversion of cytosine residues to uracil under conditions in which methyl-cytosine residues are preserved. Additional methods of the invention enable to preservation of the context of me-CpG dinucleotides. The invention also provides a recombinant, full length and substantially pure McrA protein (rMcrA) for binding and isolation of DNA fragments containing the sequence 5'-C.sup.MeCpGG-3'. Methods for making and using the rMcrA protein, and derivatives thereof are provided.

  4. Methods for detection of methyl-CpG dinucleotides

    SciTech Connect

    Dunn, John J.

    2012-09-11

    The invention provides methods for enriching methyl-CpG sequences from a DNA sample. The method makes use of conversion of cytosine residues to uracil under conditions in which methyl-cytosine residues are preserved. Additional methods of the invention enable to preservation of the context of me-CpG dinucleotides. The invention also provides a recombinant, full length and substantially pure McrA protein (rMcrA) for binding and isolation of DNA fragments containing the sequence 5'-C.sup.MeCpGG-3'. Methods for making and using the rMcrA protein, and derivatives thereof are provided.

  5. COMPARISON OF TWO METHODS FOR DETECTION OF GIARDIA CYSTS AND CRYTOSPORIDIUM OOCYSTS IN WATER

    EPA Science Inventory

    The steps of two immunofluorescent-antibody-based detection methods were evaluated for their efficiencies in detecting Giardia cysts and Cryptosporidium oocysts. The two methods evaluated were the American Society for Testing and Materials proposed test method for Giardia cysts a...

  6. Method of Detecting Coliform Bacteria and Escherichia Coli Bacteria from Reflected Light

    NASA Technical Reports Server (NTRS)

    Vincent, Robert (Inventor)

    2013-01-01

    The present invention relates to a method of detecting coliform bacteria in water from reflected light and a method of detecting Eschericha Coli bacteria in water from reflected light, and also includes devices for the measurement, calculation and transmission of data relating to that method.

  7. A novel dictionary based computer vision method for the detection of cell nuclei.

    PubMed

    De Vylder, Jonas; Aelterman, Jan; Lepez, Trees; Vandewoestyne, Mado; Douterloigne, Koen; Deforce, Dieter; Philips, Wilfried

    2013-01-01

    Cell nuclei detection in fluorescent microscopic images is an important and time consuming task in a wide range of biological applications. Blur, clutter, bleed through and partial occlusion of nuclei make individual nuclei detection a challenging task for automated image analysis. This paper proposes a novel and robust detection method based on the active contour framework. Improvement over conventional approaches is achieved by exploiting prior knowledge of the nucleus shape in order to better detect individual nuclei. This prior knowledge is defined using a dictionary based approach which can be formulated as the optimization of a convex energy function. The proposed method shows accurate detection results for dense clusters of nuclei, for example, an F-measure (a measure for detection accuracy) of 0.96 for the detection of cell nuclei in peripheral blood mononuclear cells, compared to an F-measure of 0.90 achieved by state-of-the-art nuclei detection methods.

  8. [A New Method for Eliminating Background Signal Drift to Improve the Detection Precision in Continuous Harmonic Detection].

    PubMed

    Zhao, Ying; Zhao, Xue-hong; Wang, Zhe; Zhang, Rui; Wang, Yan

    2015-11-01

    To overcome the second harmonic background signal drift in gas continuous detection based on tunable diode laser absorption spectroscopy(TDLAS), a new method of background elimination was proposed by changing center current of the laser. This method can eliminated the effects of background signal drifting on concentration inversion. Based on the wavelength modulation theory, the theoretical expression of the second harmonic of the background signal is derived. In addition, the second harmonic background signal components and the factors that affect it are described. In different working temperatures, the relationship curve between thelaser current and output light intensity. In the process of continuous detection, we analyzes the feasibility ofchangingthe laser center current extraction of background signal. Combined with the principle of the background signal searching, the LabView flow chart was designed to search background center current. Ammonia (NH₃) was detected by the TDLAS experimental system, which demonstrated the feasibility of the new method. The range of experiment parameters and the range of background center current searches were determined, in the situation that there was only one absorption line in the full laser workspace. The experimental results showed that this method realizes background signal extraction, reduces the error of concentration inversion and the effects of concentration inversion bybackground signal. Thus it improved the detection accuracy of the concentration. In the continuous detection experiment, the standarddeviation of inversion concentration reduced from 2.688 3 to 1.856 1, which demonstrated. that the degree of dispersion of detected concentration is reduced, even eliminate the effects of background signal drifting on concentration inversion and the accuracy of detection is improved. This method provides an effective background drifting elimination approach for improving the detection accuracy of the concentration.

  9. [Development of sample pretreatment techniques-rapid detection coupling methods for food security analysis].

    PubMed

    Huang, Yichun; Ding, Weiwei; Zhang, Zhuomin; Li, Gongke

    2013-07-01

    This paper summarizes the recent developments of the rapid detection methods for food security, such as sensors, optical techniques, portable spectral analysis, enzyme-linked immunosorbent assay, portable gas chromatograph, etc. Additionally, the applications of these rapid detection methods coupled with sample pretreatment techniques in real food security analysis are reviewed. The coupling technique has the potential to provide references to establish the selective, precise and quantitative rapid detection methods in food security analysis.

  10. CRITERIA FOR EVALUATION OF PROPOSED PROTOZOAN DETECTION METHODS.

    EPA Science Inventory

    There has been a proliferation of techniques and methods reported for analysis of water samples to determine the presence of the protozoan pathogens Cryptosporidium parvum and Giardia lamblia. Many of the proposed methods are presented as complete procedures, which include sampli...

  11. CRITERIA FOR EVALUATION OF PROPOSED PROTOZOAN DETECTION METHODS

    EPA Science Inventory

    There has been a proliferation of techniques and methods reported for analysis of water samples to determine the presence of the protozoan pathogens Cryptosporidium parvum and Giardia lamblia. Many of the proposed methods are presented as complete procedures, which include sampli...

  12. Method of detecting and counting bacteria in body fluids

    NASA Technical Reports Server (NTRS)

    Chappelle, E. W.; Picciolo, G. L. (Inventor)

    1973-01-01

    A novel method is reported for determining bacterial levels in urine samples, which method depends on the quantitative determination of bacterial adenosine triphosphate (ATP) in the presence of non-bacterial ATP. After the removal of non-bacterial ATP, the bacterial ATP is released by cell rupture and is measured by an enzymatic bioluminescent assay using an enzyme obtained from the firefly.

  13. A Comparison of Methods for Detecting Differential Distractor Functioning

    ERIC Educational Resources Information Center

    Koon, Sharon

    2010-01-01

    This study examined the effectiveness of the odds-ratio method (Penfield, 2008) and the multinomial logistic regression method (Kato, Moen, & Thurlow, 2009) for measuring differential distractor functioning (DDF) effects in comparison to the standardized distractor analysis approach (Schmitt & Bleistein, 1987). Students classified as participating…

  14. A method for the early detection of instabilities in rotordynamics

    NASA Technical Reports Server (NTRS)

    Zalik, Richard A.

    1989-01-01

    For a simple Jeffcott model with deadband, a method is developed to determine stability margins by an analysis of the Discrete Fourier transform of the system response. The viability of this method is demonstrated by means of numerical simulations. The circular behavior of the system response on the stability boundary is also explained.

  15. Method for detecting the presence of prostate cancer

    DOEpatents

    Karin, Michael; Luo, Jun-Li; Tan, Wei

    2010-04-13

    The present invention relates to compositions and methods for cancer diagnosis, treatment and drug screening. In particular, the present invention provides compositions and methods for targeting the nuclear translocation of IkB kinase-.alpha. (IKK.alpha.) and the IKK.alpha.-mediated suppression of Maspin expression observed in metastatic prostate cancer cells.

  16. Simplified method for detecting tritium contamination in plants and soil

    USGS Publications Warehouse

    Andraski, B.J.; Sandstrom, M.W.; Michel, R.L.; Radyk, J.C.; Stonestrom, D.A.; Johnson, M.J.; Mayers, C.J.

    2003-01-01

    Cost-effective methods are needed to identify the presence and distribution of tritium near radioactive waste disposal and other contaminated sites. The objectives of this study were to (i) develop a simplified sample preparation method for determining tritium contamination in plants and (ii) determine if plant data could be used as an indicator of soil contamination. The method entailed collection and solar distillation of plant water from foliage, followed by filtration and adsorption of scintillation-interfering constituents on a graphitebased solid phase extraction (SPE) column. The method was evaluated using samples of creosote bush [Larrea tridentata (Sesse?? & Moc. ex DC.) Coville], an evergreen shrub, near a radioactive disposal area in the Mojave Desert. Laboratory tests showed that a 2-g SPE column was necessary and sufficient for accurate determination of known tritium concentrations in plant water. Comparisons of tritium concentrations in plant water determined with the solar distillation-SPE method and the standard (and more laborious) toluene-extraction method showed no significant difference between methods. Tritium concentrations in plant water and in water vapor of root-zone soil also showed no significant difference between methods. Thus, the solar distillation-SPE method provides a simple and cost-effective way to identify plant and soil contamination. The method is of sufficient accuracy to facilitate collection of plume-scale data and optimize placement of more sophisticated (and costly) monitoring equipment at contaminated sites. Although work to date has focused on one desert plant, the approach may be transferable to other species and environments after site-specific experiments.

  17. High-throughput detection method for influenza virus.

    PubMed

    Kumar, Pawan; Bartoszek, Allison E; Moran, Thomas M; Gorski, Jack; Bhattacharyya, Sanjib; Navidad, Jose F; Thakar, Monica S; Malarkannan, Subramaniam

    2012-01-01

    Influenza virus is a respiratory pathogen that causes a high degree of morbidity and mortality every year in multiple parts of the world. Therefore, precise diagnosis of the infecting strain and rapid high-throughput screening of vast numbers of clinical samples is paramount to control the spread of pandemic infections. Current clinical diagnoses of influenza infections are based on serologic testing, polymerase chain reaction, direct specimen immunofluorescence and cell culture (1,2). Here, we report the development of a novel diagnostic technique used to detect live influenza viruses. We used the mouse-adapted human A/PR/8/34 (PR8, H1N1) virus (3) to test the efficacy of this technique using MDCK cells (4). MDCK cells (10(4) or 5 x 10(3) per well) were cultured in 96- or 384-well plates, infected with PR8 and viral proteins were detected using anti-M2 followed by an IR dye-conjugated secondary antibody. M2 (5) and hemagglutinin (1) are two major marker proteins used in many different diagnostic assays. Employing IR-dye-conjugated secondary antibodies minimized the autofluorescence associated with other fluorescent dyes. The use of anti-M2 antibody allowed us to use the antigen-specific fluorescence intensity as a direct metric of viral quantity. To enumerate the fluorescence intensity, we used the LI-COR Odyssey-based IR scanner. This system uses two channel laser-based IR detections to identify fluorophores and differentiate them from background noise. The first channel excites at 680 nm and emits at 700 nm to help quantify the background. The second channel detects fluorophores that excite at 780 nm and emit at 800 nm. Scanning of PR8-infected MDCK cells in the IR scanner indicated a viral titer-dependent bright fluorescence. A positive correlation of fluorescence intensity to virus titer starting from 10(2)-10(5) PFU could be consistently observed. Minimal but detectable positivity consistently seen with 10(2)-10(3) PFU PR8 viral titers demonstrated the high

  18. Rapid methods for the detection of foodborne bacterial pathogens: principles, applications, advantages and limitations

    PubMed Central

    Law, Jodi Woan-Fei; Ab Mutalib, Nurul-Syakima; Chan, Kok-Gan; Lee, Learn-Han

    2015-01-01

    The incidence of foodborne diseases has increased over the years and resulted in major public health problem globally. Foodborne pathogens can be found in various foods and it is important to detect foodborne pathogens to provide safe food supply and to prevent foodborne diseases. The conventional methods used to detect foodborne pathogen are time consuming and laborious. Hence, a variety of methods have been developed for rapid detection of foodborne pathogens as it is required in many food analyses. Rapid detection methods can be categorized into nucleic acid-based, biosensor-based and immunological-based methods. This review emphasizes on the principles and application of recent rapid methods for the detection of foodborne bacterial pathogens. Detection methods included are simple polymerase chain reaction (PCR), multiplex PCR, real-time PCR, nucleic acid sequence-based amplification (NASBA), loop-mediated isothermal amplification (LAMP) and oligonucleotide DNA microarray which classified as nucleic acid-based methods; optical, electrochemical and mass-based biosensors which classified as biosensor-based methods; enzyme-linked immunosorbent assay (ELISA) and lateral flow immunoassay which classified as immunological-based methods. In general, rapid detection methods are generally time-efficient, sensitive, specific and labor-saving. The developments of rapid detection methods are vital in prevention and treatment of foodborne diseases. PMID:25628612

  19. A capture-gated fast neutron detection method

    NASA Astrophysics Data System (ADS)

    Liu, Yi; Yang, Yi-Gang; Tai, Yang; Zhang, Zhi

    2016-07-01

    To address the problem of the shortage of neutron detectors used in radiation portal monitors (RPMs), caused by the 3He supply crisis, research on a cadmium-based capture-gated fast neutron detector is presented in this paper. The detector is composed of many 1 cm × 1 cm × 20 cm plastic scintillator cuboids covered by 0.1 mm thick film of cadmium. The detector uses cadmium to absorb thermal neutrons and produce capture γ-rays to indicate the detection of neutrons, and uses plastic scintillator to moderate neutrons and register γ-rays. This design removes the volume competing relationship in traditional 3He counter-based fast neutron detectors, which hinders enhancement of the neutron detection efficiency. Detection efficiency of 21.66% ± 1.22% has been achieved with a 40.4 cm × 40.4 cm × 20 cm overall detector volume. This detector can measure both neutrons and γ-rays simultaneously. A small detector (20.2 cm × 20.2 cm × 20 cm) demonstrated a 3.3 % false alarm rate for a 252Cf source with a neutron yield of 1841 n/s from 50 cm away within 15 s measurement time. It also demonstrated a very low (<0.06%) false alarm rate for a 3.21×105 Bq 137Cs source. This detector offers a potential single-detector replacement for both neutron and the γ-ray detectors in RPM systems. Supported by National Natural Science Foundation of China (11175098, 11375095)

  20. Dynamic analysis methods for detecting anomalies in asynchronously interacting systems

    SciTech Connect

    Kumar, Akshat; Solis, John Hector; Matschke, Benjamin

    2014-01-01

    Detecting modifications to digital system designs, whether malicious or benign, is problematic due to the complexity of the systems being analyzed. Moreover, static analysis techniques and tools can only be used during the initial design and implementation phases to verify safety and liveness properties. It is computationally intractable to guarantee that any previously verified properties still hold after a system, or even a single component, has been produced by a third-party manufacturer. In this paper we explore new approaches for creating a robust system design by investigating highly-structured computational models that simplify verification and analysis. Our approach avoids the need to fully reconstruct the implemented system by incorporating a small verification component that dynamically detects for deviations from the design specification at run-time. The first approach encodes information extracted from the original system design algebraically into a verification component. During run-time this component randomly queries the implementation for trace information and verifies that no design-level properties have been violated. If any deviation is detected then a pre-specified fail-safe or notification behavior is triggered. Our second approach utilizes a partitioning methodology to view liveness and safety properties as a distributed decision task and the implementation as a proposed protocol that solves this task. Thus the problem of verifying safety and liveness properties is translated to that of verifying that the implementation solves the associated decision task. We develop upon results from distributed systems and algebraic topology to construct a learning mechanism for verifying safety and liveness properties from samples of run-time executions.