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Sample records for peach bottom sequences

  1. Severe accident source term characteristics for selected Peach Bottom sequences predicted by the MELCOR Code

    SciTech Connect

    Carbajo, J.J.

    1993-09-01

    The purpose of this report is to compare in-containment source terms developed for NUREG-1159, which used the Source Term Code Package (STCP), with those generated by MELCOR to identify significant differences. For this comparison, two short-term depressurized station blackout sequences (with a dry cavity and with a flooded cavity) and a Loss-of-Coolant Accident (LOCA) concurrent with complete loss of the Emergency Core Cooling System (ECCS) were analyzed for the Peach Bottom Atomic Power Station (a BWR-4 with a Mark I containment). The results indicate that for the sequences analyzed, the two codes predict similar total in-containment release fractions for each of the element groups. However, the MELCOR/CORBH Package predicts significantly longer times for vessel failure and reduced energy of the released material for the station blackout sequences (when compared to the STCP results). MELCOR also calculated smaller releases into the environment than STCP for the station blackout sequences.

  2. Station blackout calculations for Peach Bottom

    SciTech Connect

    Hodge, S.A.

    1985-01-01

    A calculational procedure for the Station Blackout Severe Accident Sequence at Browns Ferry Unit One has been repeated with plant-specific application to one of the Peach Bottom Units. The only changes required in code input are with regard to the primary continment concrete, the existence of sprays in the secondary containment, and the size of the refueling bay. Combustible gas mole fractions in the secondary containment of each plant during the accident sequence are determined. It is demonstrated why the current state-of-the-art corium/concrete interaction code is inadequate for application to the study of Severe Accident Sequences in plants with the BWR MK I or MK II containment design.

  3. Containment venting analysis for the Peach Bottom Atomic Power Station

    SciTech Connect

    Hanson, D.J.; Blackman, H.S.; Nelson, W.R.; Wright, R.E.; Leonard, M.T.; DiSalvo, R.

    1986-12-01

    The extent to which containment venting is an effective means of preventing or mitigating the consequences of overpressurization during severe accidents was evaluated for the Peach Bottom Atomic Power Station Units 2 and 3 (boiling water reactors with Mark I containments). Detailed analyses were conducted on operator performance, equipment performance, and the physical phenomenology for three severe accident sequences currently identified as being important contributors to risk. The results indicate that containment venting can be effective in reducing risk for several classes of severe accidents but, based on procedures in draft form and equipment in place at the time of the analyses, has limited potential for further reducing the risk for severe accidents currently identified as being important contributors to the risk for Peach Bottom.

  4. Peach bottom recirculation piping replacement ALARA program

    SciTech Connect

    Englesson, G.A.; Hilsmeier, A.E.; Mann, B.J.

    1986-01-01

    In late 1983, Philadelphia Electric Company (PECo) began detailed planning to replace the recirculation, residual heat removal, and part of the reactor water cleanup piping of the Peach Bottom Unit 2 reactor. Included in this work was an estimate of the collective exposure expected during piping replacement. That initial estimate, 1945 man-rem, is compared with the actual collective dose incurred during the piping replacement program. Also included are the exposures incurred during two additional tasks (safe end replacement and recirculation pump disassembly and decontamination) not considered in the initial estimate.

  5. Peach Bottom test element program. Final report

    SciTech Connect

    Saurwein, J.J.; Holzgraf, J.F.; MIller, C.M.; Myers, B.F.; Wallroth, C.F.

    1982-11-01

    Thirty-three test elements were irradiated in the Peach Bottom high-temperature gas-cooled reactor (HTGR) as part of the testing program for advanced HTGRs. Extensive postirradiation examinations and evaluations of 21 of these irradiation experiments were performed. The test element irradiations were simulated using HTGR design codes and data. Calculated fuel burnups, power profiles, fast neutron fluences, and temperatures were verified via destructive burnup measurements, gamma scanning, and in-pile thermocouple readings corrected for decalibration effects. Analytical techniques were developed to improve the quality of temperature predictions through feedback of nuclear measurements into thermal calculations. Dimensional measurements, pressure burst tests, diametral compression tests, ring-cutting tests, strip-cutting tests, and four-point bend tests were performed to measure residual stress, strain, and strength distributions in H-327 graphite structures irradiated in the test elements.

  6. MELCOR code analysis of a severe accident LOCA at Peach Bottom Plant

    SciTech Connect

    Carbajo, J.J. )

    1993-01-01

    A design-basis loss-of-coolant accident (LOCA) concurrent with complete loss of the emergency core cooling systems (ECCSs) has been analyzed for the Peach Bottom atomic station unit 2 using the MELCOR code, version 1.8.1. The purpose of this analysis is to calculate best-estimate times for the important events of this accident sequence and best-estimate source terms. Calculated pressures and temperatures at the beginning of the transient have been compared to results from the Peach Bottom final safety analysis report (FSAR). MELCOR-calculated source terms have been compared to source terms reported in the NUREG-1465 draft.

  7. Summary of core damage frequency from internal initiators: Peach Bottom

    SciTech Connect

    Kolaczkowski, A.M.; Lambright, J.A.; Cathey, N.

    1986-01-01

    Probabilistic risk assessments (PRAs) based on internal initiators are being conducted on a number of reference plants to provide the US Nuclear Regulatory Commission (NRC) with updated information about light-water reactor risk. The results of these analyses will be used by the NRC to prepare NUREG-1150 which will examine the NRC's current perception of risk. Peach Bottom has been chosen as one of the reference plants. The Peach Bottom Atomic Power Station has two boiling water reactor (BWR) units, each with a capacity of 1150 MW(e). The reactors are each housed in a Mark I containment. Peach Bottom Unit 2 analyzed here, was studied before as part of WASH-1400. A number of plant features tend to be important in determining the nature and frequency of the core melt scenarios for Peach Bottom. These features include the recent above-average diesel generator performance history, the single emergency service water system for both units, the numerous emergency core cooling systems, recent procedure modifications and the low volume containment.

  8. Analysis of core damage frequency from internal events: Peach Bottom, Unit 2

    SciTech Connect

    Kolaczkowski, A.M.; Lambright, J.A.; Ferrell, W.L.; Cathey, N.G.; Najafi, B.; Harper, F.T.

    1986-10-01

    This document contains the internal event initiated accident sequence analyses for Peach Bottom, Unit 2; one of the reference plants being examined as part of the NUREG-1150 effort by the Nuclear Regulatory Commission. NUREG-1150 will document the risk of a selected group of nuclear power plants. As part of that work, this report contains the overall core damage frequency estimate for Peach Bottom, Unit 2, and the accompanying plant damage state frequencies. Sensitivity and uncertainty analyses provided additional insights regarding the dominant contributors to the Peach Bottom core damage frequency estimate. The mean core damage frequency at Peach Bottom was calculated to be 8.2E-6. Station blackout type accidents (loss of all ac power) were found to dominate the overall results. Anticipated Transient Without Scram accidents were also found to be non-negligible contributors. The numerical results are largely driven by common mode failure probability estimates and to some extent, human error. Because of significant data and analysis uncertainties in these two areas (important, for instance, to the most dominant scenario in this study), it is recommended that the results of the uncertainty and sensitivity analyses be considered before any actions are taken based on this analysis.

  9. Analysis of containment venting at the Peach Bottom Atomic Power Station

    SciTech Connect

    Hanson, D.J.; Blackman, H.S.; Nelson, W.R.; Wright, R.E.; Leonard, M.T.; DiSalvo, R.

    1986-10-24

    An analysis of the extent to which containment venting would be effective in preventing or mitigating the consequences of severe accidents has been completed for the Peach Bottom Atomic Power Station, Units 2 and 3 (BWR-4s with Mark I containments). The analysis indicates that the effectiveness of venting in preventing containment overpressurization highly depends on the sequence of the severe accident. Containment venting can be effective for several classes of sequences, including transients with failure of long-term decay heat removal and loss-of-coolant accidents with breaks inside the containment. However, based on draft procedures and equipment in place at the time of the evaluation, containment venting has limited potential for further reducing the risk associated with three severe accident sequences currently identified as important risk contributors at Peach Bottom. Means of improving the potential for risk reduction is identified, but their influence on risk is not analyzed.

  10. Summary of core damage frequency from internal initiators: Peach Bottom

    SciTech Connect

    Kolaczkowski, A.M.; Lambright, J.A.; Cathey, N.

    1986-01-01

    Probabilistic risk assessments (PRA) based on internal initiators are being conducted on a number of reference plants in order to provide the Nuclear Regulatory Commission (NRC) with updated information about light water reactor risk. The results of these analyses will be used by the NRC to prepare NUREG-1150 which will examine the NRC's current perception of risk. Peach Bottom has been chosen as one of the reference plants.

  11. Condensate polishing cost reduction at Peach Bottom Atomic Power Station

    SciTech Connect

    Blomquist, R.J.

    1996-10-01

    In May 1995, PECO Nuclear began an investment of over 3 million dollars for improvements in the condensate polishers at Peach Bottom Unit 3. Based on current performance, the investment is expected to be returned by the first quarter of 1997. The centerpiece of the improvements is the backfit of pleat filters on most of the vessels. Manual isolation valves and new precoating equipment will assure sustained performance. This report summarizes the improved performance and the new equipment and methods used to achieve it.

  12. Peach Bottom Transients Analysis with TRAC/BF1-VALKIN

    SciTech Connect

    Verdu, G.; Miro, R.; Sanchez, A.M.; Rosello, O.; Ginestar, D.; Vidal, V.

    2004-10-15

    The TRAC/BF1-VALKIN code is a new time domain analysis code for studying transients in a boiling water reactor. This code uses the best-estimate code TRAC/BF1 to give an account of the heat transfer and thermal-hydraulic processes and a three-dimensional neutronics module. This module has two options: the MODKIN option that makes use of a modal method based on the assumption that the neutronic flux can be approximately expanded in terms of the dominant lambda modes associated with a static configuration of the reactor core, and the NOKIN option that uses a one-step backward discretization of the neutron diffusion equation. To check the performance of the TRAC/BF1-VALKIN code, the Peach Bottom turbine trip transient has been simulated, because this transient is a dynamically complex event where neutron kinetics is coupled with thermal hydraulics in the reactor primary system, and reactor variables change very rapidly.

  13. Analysis of Peach Bottom station blackout with MELCOR

    SciTech Connect

    Dingman, S.E.; Cole, R.K.; Haskin, F.E.; Summers, R.M.; Webb, S.W.

    1986-01-01

    A demonstration analysis of station blackout at Peach Bottom has been performed using MELCOR and the results have been compared with those from MARCON 2.1B and the Source Term Code Package (STCP). MELCOR predicts greater in-vessel hydrogen production, earlier melting and core collapse, but later debris discharge than MARCON 2.1B. The drywell fails at vessel breach in MELCOR, but failure is delayed about an hour in MARCON 2.1B. These differences are mainly due to the MELCOR models for candling during melting, in-core axial conduction, and continued oxidation and heat transfer from core debris following lower head dryout. Three sensitivity calculations have been performed with MELCOR to address uncertainties regarding modeling of the core-concrete interactions. The timing of events and the gas and radionuclide release rates are somewhat different in the base case and the three sensitivity cases, but the final conditions and total releases are similar.

  14. Feedwater heater life optimization at Peach Bottom Atomic Power Station

    SciTech Connect

    Thomas, D.S.; Catapano, M.C.

    1996-08-01

    This paper illustrates a complete inspection, testing, and maintenance program implemented at PECO Energy`s Peach Bottom Atomic Power Station (PBAPS). Concerns that tubes may have been too conservatively plugged due to insufficient data justified a program that included: removal of previously installed plugs; videoprobe inspection of failed areas; extraction of tube samples for further analysis; eddy current testing of selected tubes; evaluation of the condition of insurance plugged tubes for return to service; hydrostatic testing of selected tubes; final repair plan based on the results of the above program. This paper concludes that no single method of inspection or testing should be solely relied upon in establishing: the extent of actual degraded conditions; the source(s) of failure mechanisms; and the details of repair. It is a combination of all gathered data that affords the best chance in arresting problems and optimizing feedwater heater life.

  15. Risk-based selection of SSCs at Peach Bottom

    SciTech Connect

    Krueger, G.A.; Marie, A.J. )

    1993-01-01

    The purpose of identifying risk significant systems, structures, and components (SSCS) that are within the scope of the maintenance rule is to bring a higher level of attention to a subset of those SSCS. These risk-significant SSCs will have specific performance criteria established for them, and failure to meet this performance criteria will result in establishing goals to ensure the necessary improvement in performance. The Peach Bottom individual plant examination (IPE) results were used to provide insights for the verification of proposed probabilistic risk assessment (PRA) methods set forth in the Industry Maintenance Guidelines for Implementation of the Maintenance Rule. The objective of reviewing the methods for selection of SSCs that are considered risk significant was to ensure the methods used are logical, reproducible, and can be consistently applied.

  16. Philadelphia Electric Company's computer replacement lessons learned at Peach Bottom

    SciTech Connect

    Clark, J.M.; O'Hara, J.

    1989-01-01

    The current regulatory climate continues to prod today's nuclear utilities toward safer and more reliable operation of their plants. U.S. Nuclear Regulatory Commission guides NUREG-0660, NUREG-0696, and Supplement I to NUREG-0737 have all set forth increased requirements for plant monitoring. In response, the industry has looked at their existing plant computer systems as targets for enhancement or upgrade. This external pressure is nearly matched by the increasing demands made on existing computer systems by utility engineering and operations departments. The longer utilities postpone this evolution, the more likely they are to replace the entire system rather than upgrade the existing one. The older systems become harder to maintain and eventually are technically inferior to new systems, which have benefited from advances in computer technology in recent years. Enhancements become less economically advantageous than system replacements as the spread in technology widens. The object of this paper is to describe the Plant Process Computer Replacement Project at Philadelphia Electric Company's (PECo's) Peach Bottom Atomic Power Station. This paper explores (a) the impact on the plant, (b) the design and engineering services required, and (c) the planning and communication essential to a successful computer replacement project.

  17. Analysis of containment venting for the Peach Bottom Atomic Power Station

    SciTech Connect

    Hanson, D.J.; Wright, R.E.; Jenkins, J.P.

    1986-09-12

    The effectiveness of containment venting as a means of preventing or mitigating the consequences of severe accidents was evaluated for Peach Bottom Atomic Power Station Units 2 and 3 (BWR-4s with Mark I containments). Results from this evaluation indicate that the effectiveness of venting in preventing containment failure is highly dependent on the severe accident sequence. Containment venting can be effective for several classes of sequences, including loss-of-coolant accidents with breaks in the containment and transients with a failure of containment heat removal. However, based on draft procedures and equipment in place at the time of the evaluation, containment venting has limited potential for further reducing the risk associated with several sequences currently identified as significant contributors to risk. Means of improving the potential for risk reduction were identified, but their influence on risk was not analyzed.

  18. MELCOR simulation of long-term station blackout at Peach Bottom

    SciTech Connect

    Madni, I.K.

    1990-01-01

    This paper presents the results from MELCOR (Version 1.8BC) calculations of the Long-Term Station Blackout Accident Sequence, with failure to depressurize the reactor vessel, at the Peach Bottom (BWR Mark I) plant, and presents comparisons with Source Term Code Package (STCP) calculations of the same sequence. This sequence assumes that batteries are available for six hours following loss of all power to the plant. Following battery failure, the reactor coolant system (RCS) inventory is boiled off through the relief valves by continued decay heat generation. This leads to core uncovery, heatup, clad oxidation, core degradation, relocation, and, eventually, vessel failure at high pressure. STCP has calculated the transient out to 13.5 hours after core uncovery. The results include the timing of key events, pressure and temperature response in the reactor vessel and containment, hydrogen production, and the release of source terms to the environment. 12 refs., 23 figs., 3 tabs.

  19. Evaluation of MELCOR improvements: Peach Bottom station blackout analyses

    SciTech Connect

    Madni, I.K.

    1993-12-31

    Long-term station blackout analyses in Peach Bottom were first carried out using MELCOR 1.8BC, and later with 1.8DN, as part of an overall program between the US Nuclear Regulatory Commission (NRC) and Brookhaven National Laboratory (BNL), to provide independent assessment of MELCOR as a severe accident/source term analysis tool. In addition to the reference MELCOR calculation, several sensitivity calculations were also performed to explore the impact of varying user-input modeling and timestep control parameters on the accident progression and radionuclide releases to the environment calculated by MELCOR. An area of concern that emerged from these studies was the impact of the selection of maximum allowable timestep ({Delta}t{sub max}) on the calculational behavior of MELCOR, where the results showed significant differences in timing of key events, and a lack of convergence of the solution with reduction of {Delta}t{sub max}. These findings were reported to the NRC, SNL, and the MELCOR Peer Review Committee. As a consequence, a significant effort was undertaken to eliminate or mitigate these sensitivities. The latest released version of MELCOR, Version 1.8.2, released in April 1993, contains several new or improved models, and has corrections to mitigate numerical sensitivities. This paper presents the results of updating the earlier sensitivity studies on maximum timestep, to more properly represent the abilities of the improved MELCOR version 1.8.2. Results are presenter in terms of timing of key events, thermal-hydraulic response of the system, and environmental release of radionuclides. The impact of some of the newer models, such as falling debris quench model, and ORNL`s new BH model, is also evaluated.

  20. Peach Bottom and Vermont Yankee Nuclear Power Plants

    SciTech Connect

    1992-12-31

    A dramatic and extraordinary instance of state and local government control of nuclear power, the purchase by New York of the Shoreham plant is nonetheless indicative of the political demands that some states confront for additional involvement in the regulation of the radiological hazards associated with commercial nuclear power plants. Although the Supreme Court has appeared to expand, in the eight years since PG&E and Silkwood, the acceptable extent of state regulation, some states, in addition to New York, have acquired, with the acquiescence of the NRC, a degree of involvement that exceeds the role for state and local governments provided by the Court. For example, the Commonwealth of Pennsylvania concluded with the Philadelphia Electric Company (PECO) in June 1989 an agreement that commits PECO to various initiatives, not otherwise required under NRC regulations, for the safe operation of the Peach Bottom nuclear power plant in Pennsylvania. In July 1991 the State of Vermont and Vermont Yankee Nuclear Power Corporation (Vermont Yankee) concluded an agreement similar to that concluded between Pennsylvania and PECO. The agreement also commits Vermont Yankee to certain initiatives, not otherwise required under NRC regulations, related to its operation of the Vermont Yankee nuclear power plant in Vermont. The agreement was precipitated by a challenge to an application, submitted to the NRC by Vermont Yankee in April 1989, to amend the Vermont Yankee plant license to extend its expiration date from December 11, 2007 to March 21, 2012. The amendment would allow the Vermont Yankee plant to operate for forty full years.

  1. Feedwater heater life optimization at Peach Bottom Atomic Power Station

    SciTech Connect

    Catapano, M.C.; Thomas, D.S.

    1995-12-01

    Many papers published over the last 15 years have strongly emphasized the need for an ongoing program of inspection and testing with subsequent failure cause analysis of feedwater heaters. With deregulation of the electric utility industry in various phases of implementation, utilities must decrease costs, both O&M and capital, while optimizing plant efficiency. In order to accomplish this coal, utility engineers must monitor feedwater heater performance in order to recognize degradation, correct/eliminate failure mechanisms, and prevent in-service failures while optimizing availability. Periodic tube plugging without complete analysis of the degraded/failed area resolves the immediate need for return for service, however, heater life will not be graded/failed area resolves optimized. This paper illustrates a complete inspection, testing, and maintenance program implemented at PECO Energy`s Peach Bottom Atomic Power Station (PBAPS). Concerns that tubes may have been too conservatively plugged due to insufficient data justified a program that included: (1) Removal of previously installed plugs. (2) Videoprobe inspection of failed areas. (3) Extraction of tube samples for further analysis. (4) Eddy current testing of selected tubes. (5) Evaluation of the condition of {open_quotes}insurance{close_quotes} plugged tubes for return to service. (6) Hydrostatic testing of selected tubes. (7) Final repair plan based on the results of the above program. This paper concludes that no single method of inspection or testing should solely be relied upon in establishing: (1) The extent of actual degraded conditions, (2) The source(s) of failure mechanisms, (3) The details of repair. It is a combination of all gathered data that affords the best chance in arresting problems and optimizing feedwater heater life.

  2. Analysis of core damage frequency: Peach Bottom, Unit 2 internal events

    SciTech Connect

    Kolaczkowski, A.M.; Cramond, W.R.; Sype, T.T.; Maloney, K.J.; Wheeler, T.A.; Daniel, S.L.; Sandia National Labs., Albuquerque, NM )

    1989-08-01

    This document contains the appendices for the accident sequence analysis of internally initiated events for the Peach Bottom, Unit 2 Nuclear Power Plant. This is one of the five plant analyses conducted as part of the NUREG-1150 effort for the Nuclear Regulatory Commission. The work performed and described here is an extensive reanalysis of that published in October 1986 as NUREG/CR-4550, Volume 4. It addresses comments from numerous reviewers and significant changes to the plant systems and procedures made since the first report. The uncertainty analysis and presentation of results are also much improved, and considerable effort was expended on an improved analysis of loss of offsite power. The content and detail of this report is directed toward PRA practitioners who need to know how the work was done and the details for use in further studies. 58 refs., 58 figs., 52 tabs.

  3. 76 FR 25378 - Exelon Generation Company, LLC; PSEG Nuclear, LLC; Peach Bottom Atomic Power Station, Units 2 and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-05-04

    ... From the Federal Register Online via the Government Publishing Office NUCLEAR REGULATORY COMMISSION Exelon Generation Company, LLC; PSEG Nuclear, LLC; Peach Bottom Atomic Power Station, Units 2 and... Nos. DPR-44 and DPR-56 for the Peach Bottom Atomic Power Station (PBAPS), Units 2 and 3, located in...

  4. 75 FR 6071 - Exelon Generation Company, LLC; PSEG Nuclear, LLC; Peach Bottom Atomic Power Station Units 2 and...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-02-05

    ... From the Federal Register Online via the Government Publishing Office NUCLEAR REGULATORY COMMISSION Exelon Generation Company, LLC; PSEG Nuclear, LLC; Peach Bottom Atomic Power Station Units 2 and 3... Operating License Nos. DPR-44 and DPR-56 for the Peach Bottom Atomic Power Station (PBAPS), Units 2 and 3...

  5. Fission product behavior in the Peach Bottom and Fort St. Vrain HTGRs

    SciTech Connect

    Hanson, D.L.; Baldwin, N.L.; Strong, D.E.

    1980-11-01

    Actual operating data from Peach Bottom and Fort St. Vrain were compared with code predictions to assess the validity of the methods used to predict the behavior of fission products in the primary coolant circuit. For both reactors the measured circuit activities were significantly below design values, and the observations generally verify the codes used for large HTGR design.

  6. RETRAN-3D MOD003 Peach Bottom Turbine Trip 2 Multidimensional Kinetics Analysis Models and Results

    SciTech Connect

    Mori, Michitsugu; Ogura, Katsunori; Gose, Garry C.; Wu, J.-Y

    2003-04-15

    An analysis of the Peach Bottom Unit 2 Turbine Trip Test 2 (PB2/TT2) has been performed using RETRAN-3D MOD003. The purpose of the analysis was to investigate the PB2/TT2 overpressurization transient using the RETRAN-3D multidimensional kinetics model.

  7. Source terms released into the environment for a station blackout severe accident at the Peach Bottom Atomic Power Station

    SciTech Connect

    Carbajo, J.J.

    1995-07-01

    This study calculates source terms released into the environment at the Peach Bottom Atomic Power Station after containment failure during a postulated low-pressure, short-term station blackout severe accident. The severe accident analysis code MELCOR, version 1.8.1, was used in these calculations. Source terms were calculated for three different containment failure modes. The largest environmental releases occur for early containment failure at the drywell liner in contact with the cavity by liner melt-through. This containment failure mode is very likely to occur when the cavity is dry during this postulated severe accident sequence.

  8. Analysis of core damage frequency: Peach Bottom, Unit 2 internal events appendices

    SciTech Connect

    Kolaczkowski, A.M.; Cramond, W.R.; Sype, T.T.; Maloney, K.J.; Wheeler, T.A.; Daniel, S.L.; Sandia National Labs., Albuquerque, NM )

    1989-08-01

    This document contains the appendices for the accident sequence analysis of internally initiated events for the Peach Bottom, Unit 2 Nuclear Power Plant. This is one of the five plant analyses conducted as part of the NUREG-1150 effort for the Nuclear Regulatory Commission. The work performed and described here is an extensive reanalysis of that published in October 1986 as NUREG/CR-4550, Volume 4. It addresses comments from numerous reviewers and significant changes to the plant systems and procedures made since the first report. The uncertainty analysis and presentation of results are also much improved, and considerable effort was expended on an improved analysis of loss of offsite power. The content and detail of this report is directed toward PRA practitioners who need to know how the work was done and the details for use in further studies. The mean core damage frequency is 4.5E-6 with 5% and 95% uncertainty bounds of 3.5E-7 and 1.3E-5, respectively. Station blackout type accidents (loss of all ac power) contributed about 46% of the core damage frequency with Anticipated Transient Without Scram (ATWS) accidents contributing another 42%. The numerical results are driven by loss of offsite power, transients with the power conversion system initially available operator errors, and mechanical failure to scram. 13 refs., 345 figs., 171 tabs.

  9. Peach Bottom Turbine Trip Simulations with RETRAN Using INER/TPC BWR Transient Analysis Method

    SciTech Connect

    Kao Lainsu; Chiang, Show-Chyuan

    2005-03-15

    The work described in this paper is benchmark calculations of pressurization transient turbine trip tests performed at the Peach Bottom boiling water reactor (BWR). It is part of an overall effort in providing qualification basis for the INER/TPC BWR transient analysis method developed for the Kuosheng and Chinshan plants. The method primarily utilizes an advanced system thermal hydraulics code, RETRAN02/MOD5, for transient safety analyses. Since pressurization transients would result in a strong coupling effect between core neutronic and system thermal hydraulics responses, the INER/TPC method employs the one-dimensional kinetic model in RETRAN with a cross-section data library generated by the Studsvik-CMS code package for the transient calculations. The Peach Bottom Turbine Trip (PBTT) tests, including TT1, TT2, and TT3, have been successfully performed in the plant and assigned as standards commonly for licensing method qualifications for years. It is an essential requirement for licensing purposes to verify integral capabilities and accuracies of the codes and models of the INER/TPC method in simulating such pressurization transients. Specific Peach Bottom plant models, including both neutronics and thermal hydraulics, are developed using modeling approaches and experiences generally adopted in the INER/TPC method. Important model assumptions in RETRAN for the PBTT test simulations are described in this paper. Simulation calculations are performed with best-estimated initial and boundary conditions obtained from plant test measurements. The calculation results presented in this paper demonstrate that the INER/TPC method is capable of calculating accurately the core and system transient behaviors of the tests. Excellent agreement, both in trends and magnitudes between the RETRAN calculation results and the PBTT measurements, shows reliable qualifications of the codes/users/models involved in the method. The RETRAN calculated peak neutron fluxes of the PBTT

  10. Assessment of engineering plant analyzer with Peach Bottom 2 stability tests

    SciTech Connect

    Rohatgi, U.S.; Mallen, A.N.; Cheng, H.S.; Wulff, W.

    1992-01-01

    Engineering Plant Analyzer (EPA) has been developed to simulate plant transients for Boiling Water Reactor (BWR). Recently, this code has been used to simulate LaSalle-2 instability event which was initiated by a failure in the feed water heater. The simulation was performed for the scram conditions and for the postulated failure in the scram. In order to assess the capability of the EPA to simulate oscillatory flows as observed in the LaSalle event, EPA has been benchmarked with the available data from the Peach Bottom 2 (PB2) Instability tests PT1, PT2, and PT4. This document provides a description of these tests.

  11. SIMULATE-3K Peach Bottom 2 Turbine Trip 2 Benchmark Calculations

    SciTech Connect

    Belblidia, Lotfi A.; Grandi, Gerardo M.; Joensson, Christian

    2004-10-15

    This paper discusses the model and results for the Peach Bottom 2 Turbine Trip Test 2 using Studsvik Scandpower's transient code SIMULATE-3K. All data pertaining to core, vessel, and scenario were taken from the NEA/OECD BWR benchmark specifications. Nuclear data were generated with Studsvik Scandpower's lattice code CASMO-4 and core analysis code SIMULATE-3. Comparisons to measured data, sensitivity to model options and data, as well as results from more limiting scenarios are presented. SIMULATE-3K captures well the pressure wave propagation, void collapse during the pressurization phase, and resulting power excursion.

  12. Application of the N-Streaming SM concept to Peach Bottom 2 Cycle 17

    SciTech Connect

    Asgari, M.; Kropaczek, D. J.; Oyarzun, C. C.

    2006-07-01

    This paper discusses the application of the N-Streaming concept developed at Global Nuclear Fuel for the design of a Boiling Water Reactor (BWR) fuel cycle. The paper presents the N-Streaming concept and discusses the application of N-Streaming to the recent fuel cycle for Peach Bottom Unit 2 Cycle 17. It is demonstrated that the application of N-Streaming provides extra design freedom to optimize design margins allowing better operational flexibility while reducing the fuel cycle cost. (authors)

  13. Assessment of engineering plant analyzer with Peach Bottom 2 stability tests

    SciTech Connect

    Rohatgi, U.S.; Mallen, A.N.; Cheng, H.S.; Wulff, W.

    1992-08-01

    Engineering Plant Analyzer (EPA) has been developed to simulate plant transients for Boiling Water Reactor (BWR). Recently, this code has been used to simulate LaSalle-2 instability event which was initiated by a failure in the feed water heater. The simulation was performed for the scram conditions and for the postulated failure in the scram. In order to assess the capability of the EPA to simulate oscillatory flows as observed in the LaSalle event, EPA has been benchmarked with the available data from the Peach Bottom 2 (PB2) Instability tests PT1, PT2, and PT4. This document provides a description of these tests.

  14. Environmental radionuclide concentrations in the vicinity of the Peach Bottom Atomic Power Station: 1991--1994

    SciTech Connect

    Stanek, M.A.; Jones, T.S.; Frithsen, J.B.; McLean, R.I.

    1997-02-01

    The Maryland Power Plant Research Program monitors concentrations of natural, weapons, and power plant produced radionuclides in environmental samples collected from the Susquehanna River-Chesapeake Bay system in the vicinity of Peach Bottom Atomic Power Station (PBAPS). The purpose of this monitoring is to determine the fate, transport, and potential effects of power plant produced radionuclides. This report contains a description of monitoring activities and data collected during the period 1991 through 1994 and is the fifth in a series reporting monitoring results initiated at PBAPS in 1979.

  15. Diversity, population structure, and evolution of local peach cultivars in China identified by simple sequence repeats.

    PubMed

    Shen, Z J; Ma, R J; Cai, Z X; Yu, M L; Zhang, Z

    2015-01-15

    The fruit peach originated in China and has a history of domestication of more than 4000 years. Numerous local cultivars were selected during the long course of cultivation, and a great morphological diversity exists. To study the diversity and genetic background of local peach cultivars in China, a set of 158 accessions from different ecological regions, together with 27 modern varieties and 10 wild accessions, were evaluated using 49 simple sequence repeats (SSRs) covering the peach genome. Broad diversity was also observed in local cultivars at the SSR level. A total of 648 alleles were amplified with an average of 13.22 observed alleles per locus. The number of genotypes detected ranged from 9 (UDP96015) to 58 (BPPCT008) with an average of 27.00 genotypes per marker. Eight subpopulations divided by STRUCTURE basically coincided with the dendrogram of genetic relationships and could be explained by the traditional groups. The 8 subpopulations were juicy honey peach, southwestern peach I, wild peach, Buddha peach + southwestern peach II, northern peach, southern crisp peach, ornamental peach, and Prunus davidiana + P. kansuensis. Most modern varieties carried the genetic backgrounds of juicy honey peach and southwestern peach I, while others carried diverse genetic backgrounds, indicating that local cultivars were partly used in modern breeding programs. Based on the traditional evolution pathway, a modified pathway for the development of local peach cultivars in China was proposed using the genetic background of subpopulations that were identified by SSRs. Current status and prospects of utilization of Chinese local peach cultivars were also discussed according to the SSR information.

  16. Environmental radionuclide concentrations in the vicinity of the Peach Bottom Atomic Power Station: 1987-1990. Final report

    SciTech Connect

    Stanek, M.A.; McLean, R.I.

    1995-12-20

    The Maryland Power Plant Research Program monitors concentrations of natural, weapons, and power plant produced radionuclides in environmental samples collected from the Susquehanna River-Chesapeake Bay system in the vicinity of Peach Bottom Atomic Power Station (PBAPS). The purpose of the monitoring is to determine the fate, transport, and potential effects of power plant produced radionuclides. The data report contains a description of monitoring activities and data collected during the period 1987 through 1990 and is the fourth in a series reporting monitoring results initiated at Peach Bottom in 1978.

  17. BWRSAR (Boiling Water Reactor Severe Accident Response) calculations of reactor vessel debris pours for Peach Bottom short-term station blackout

    SciTech Connect

    Hodge, S.A.; Ott, L.J.

    1988-01-01

    This paper describes recent analyses performed by the BWR Severe Accident Technology (BWRSAT) Program at Oak Ridge National Laboratory to estimate the release of debris from the reactor vessel for the unmitigated short-term station blackout accident sequence. Calculations were performed with the BWR Severe Accident Response (BWRSAR) code and are based upon consideration of the Peach Bottom Atomic Power Station. The modeling strategies employed within BWRSAR for debris relocation within the reactor vessel are briefly discussed and the calculated events of the accident sequence, including details of the calculated debris pours, are presented. 4 refs., 13 figs., 3 tabs.

  18. Simple sequence repeat analysis of genetic diversity in primary core collection of peach (Prunus persica).

    PubMed

    Li, Tian-Hong; Li, Yin-Xia; Li, Zi-Chao; Zhang, Hong-Liang; Qi, Yong-Wen; Wang, Tao

    2008-01-01

    In this study, the genetic diversity of 51 cultivars in the primary core collection of peach (Prunus persica (L.) Batsch) was evaluated by using simple sequence repeats (SSRs). The phylogenetic relationships and the evolutionary history among different cultivars were determined on the basis of SSR data. Twenty-two polymorphic SSR primer pairs were selected, and a total of 111 alleles were identified in the 51 cultivars, with an average of 5 alleles per locus. According to traditional Chinese classification of peach cultivars, the 51 cultivars in the peach primary core collection belong to six variety groups. The SSR analysis revealed that the levels of the genetic diversity within each variety group were ranked as Sweet peach > Crisp peach > Flat peach > Nectarine > Honey Peach > Yellow fleshed peach. The genetic diversity among the Chinese cultivars was higher than that among the introduced cultivars. Cluster analysis by the unweighted pair group method with arithmetic averaging (UPGMA) placed the 51 cultivars into five linkage clusters. Cultivar members from the same variety group were distributed in different UPGMA clusters and some members from different variety groups were placed under the same cluster. Different variety groups could not be differentiated in accordance with SSR markers. The SSR analysis revealed rich genetic diversity in the peach primary core collection, representative of genetic resources of peach.

  19. Environmental radionuclide concentrations in the vicinity of the Peach Bottom Atomic Power Plant: 1981-1984

    SciTech Connect

    McLean, R.L.; Domotor, S.L.

    1988-03-01

    Since 1979, the Power Plant Research Program (PPRP) has conducted radiological monitoring and research in the vicinity of the Peach Bottom Atomic Power Station (PBAPS) to determine the environmental distribution and ecosystem impact of radioactivity released to the Susquehanna River by the plant. During 1981-1984, the subject period of the report, aqueous discharges by PBAPS produced low levels of Zn-65, Cs-134, and Cs-137 in biota of the lower Susquehanna River. Radionuclide concentrations were highest in the vicinity of the plant discharge in the Conowingo Pond. Finfish collected from the Conowingo Dam Tailrace also contained detectable levels of PBAPS-related radionuclides. These radionuclides, as well as Co-60 were also detected in sediments collected from the Conowingo Pond, the lower Susquehanna River, and the upper Chesapeake Bay. Concentrations in sediments were highest in the Conowingo Pond, along the western shore downstream of the plant discharge.

  20. Evaluation of severe accident risks, Peach Bottom, Unit 2: Main report

    SciTech Connect

    Payne, A.C.; Breeding, R.J.; Jow, H.N.; Shiver, A.W. ); Helton, J.C. ); Smith, L.N. )

    1990-12-01

    In support of the Nuclear Regulatory Commission's (NRC's) assessment of the risk from severe accidents at commercial nuclear power plants in the US reported NUREG-1150, the Severe Accident Risk Reduction Program (SARRP) has completed a revised calculation of the risk to the general public from severe accidents at the Peach Bottom Atomic Power Station, Unit 2. This power plant, located in southeastern Pennsylvania, is operated by the Philadelphia Electric Company. The emphasis in this risk analysis was not on determining a so-called'' point estimate of risk. Rather, it was to determine the distribution of risk, and to discover the uncertainties that account for the breadth of this distribution. Off-site risk initiated by events both internal and external to the power station were assessed. 39 refs., 174 figs., 133 tabs.

  1. Updated Peach Bottom Model for MELCOR 1.8.6: Description and Comparisons

    SciTech Connect

    Robb, Kevin R

    2014-09-01

    A MELCOR 1.8.5 model of the Peach Bottom Unit 2 or 3 has been updated for MELCOR 1.8.6. Primarily, this update involved modification of the lower head modeling. Three additional updates were also performed. First, a finer nodalization of the containment wet well was employed. Second, the pressure differential used by the logic controlling the safety relief valve actuation was modified. Finally, an additional stochastic failure mechanism for the safety relief valves was added. Simulation results from models with and without the modifications were compared. All the analysis was performed by comparing key figures of merit from simulations of a long-term station blackout scenario. This report describes the model changes and the results of the comparisons.

  2. Analysis of Long-Term Station Blackout without automatic depressurization at Peach Bottom using MELCOR (Version 1.8)

    SciTech Connect

    Madni, I.K.

    1994-05-01

    This report documents the results from MELCOR calculations of the Long-Term Station Blackout Accident Sequence, with failure to depressurize the reactor vessel, at the Peach Bottom (BWR Mark I) plant, and presents comparisons with Source Term Code Package calculations of the same sequence. STCP has calculated the transient out to 13.5, hours after core uncovery. Most of the MELCOR calculations presented have been carried out to between 15 and 16.7 hours after core uncovery. The results include the release of source terms to the environment. The results of several sensitivity calculations with MELCOR are also presented, which explore the impact of varying user-input modeling and timestep control parameters on the accident progression and release of source terms to the environment. Most of the calculations documented here were performed in FY1990 using MELCOR Version 1.8BC. However, the appendices also document the results of more recent calculations performed in FY1991 using MELCOR versions 1.8CZ and 1.8DNX.

  3. Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection.

    PubMed

    Ahmad, Riaz; Parfitt, Dan E; Fass, Joseph; Ogundiwin, Ebenezer; Dhingra, Amit; Gradziel, Thomas M; Lin, Dawei; Joshi, Nikhil A; Martinez-Garcia, Pedro J; Crisosto, Carlos H

    2011-11-22

    The application of next generation sequencing technologies and bioinformatic scripts to identify high frequency SNPs distributed throughout the peach genome is described. Three peach genomes were sequenced using Roche 454 and Illumina/Solexa technologies to obtain long contigs for alignment to the draft 'Lovell' peach sequence as well as sufficient depth of coverage for 'in silico' SNP discovery. The sequences were aligned to the 'Lovell' peach genome released April 01, 2010 by the International Peach Genome Initiative (IPGI). 'Dr. Davis', 'F8, 1-42' and 'Georgia Belle' were sequenced to add SNPs segregating in two breeding populations, Pop DF ('Dr. Davis' × 'F8, 1-42') and Pop DG ('Dr. Davis' × 'Georgia Belle'). Roche 454 sequencing produced 980,000 total reads with 236 Mb sequence for 'Dr. Davis' and 735,000 total reads with 172 Mb sequence for 'F8, 1-42'. 84 bp × 84 bp paired end Illumina/Solexa sequences yielded 25.5, 21.4, 25.5 million sequences for 'Dr. Davis', 'F8, 1-42' and 'Georgia Belle', respectively. BWA/SAMtools were used for alignment of raw reads and SNP detection, with custom PERL scripts for SNP filtering. Velvet's Columbus module was used for sequence assembly. Comparison of aligned and overlapping sequences from both Roche 454 and Illumina/Solexa resulted in the selection of 6654 high quality SNPs for 'Dr. Davis' vs. 'F8, 1-42' and 'Georgia Belle', distributed on eight major peach genome scaffolds as defined from the 'Lovell' assembly. The eight scaffolds contained about 215-225 Mb of peach genomic sequences with one SNP/~ 40,000 bases. All sequences from Roche 454 and Illumina/Solexa have been submitted to NCBI for public use in the Short Read Archive database. SNPs have been deposited in the NCBI SNP database.

  4. Summary of Preliminary Criticality Analysis for Peach Bottom Fuel in the DOE Standardized Spent Nuclear Fuel Canister

    SciTech Connect

    Henrikson, D.J.

    1999-09-01

    The Department of Energy's (DOE's) National Spent Nuclear Fuel Program is developing a standardized set of canisters for DOE spent nuclear fuel (SNF). These canisters will be used for DOE SNF handling, interim storage, transportation, and disposal in the national repository. Several fuels are being examined in conjunction with the DOE SNF canisters. This report summarizes the preliminary criticality safety analysis that addresses general fissile loading limits for Peach Bottom graphite fuel in the DOE SNF canister. The canister is considered both alone and inside the 5-HLW/DOE Long Spent Fuel Co-disposal Waste Package, and in intact and degraded conditions. Results are appropriate for a single DOE SNF canister. Specific facilities, equipment, canister internal structures, and scenarios for handling, storage, and transportation have not yet been defined and are not evaluated in this analysis. The analysis assumes that the DOE SNF canister is designed so that it maintains reasonable geometric integrity. Parameters important to the results are the canister outer diameter, inner diameter, and wall thickness. These parameters are assumed to have nominal dimensions of 45.7-cm (18.0-in.), 43.815-cm (17.25-in), and 0.953-cm (0.375-in.), respectively. Based on the analysis results, the recommended fissile loading for the DOE SNF canister is 13 Peach Bottom fuel elements if no internal steel is present, and 15 Peach Bottom fuel elements if credit is taken for internal steel.

  5. SOARCA Peach Bottom Atomic Power Station Long-Term Station Blackout Uncertainty Analysis: Knowledge Advancement.

    SciTech Connect

    Gauntt, Randall O.; Mattie, Patrick D.; Bixler, Nathan E.; Ross, Kyle; Cardoni, Jeffrey N; Kalinich, Donald A.; Osborn, Douglas M.; Sallaberry, Cedric Jean-Marie; Ghosh, S. Tina

    2014-02-01

    This paper describes the knowledge advancements from the uncertainty analysis for the State-of- the-Art Reactor Consequence Analyses (SOARCA) unmitigated long-term station blackout accident scenario at the Peach Bottom Atomic Power Station. This work assessed key MELCOR and MELCOR Accident Consequence Code System, Version 2 (MACCS2) modeling uncertainties in an integrated fashion to quantify the relative importance of each uncertain input on potential accident progression, radiological releases, and off-site consequences. This quantitative uncertainty analysis provides measures of the effects on consequences, of each of the selected uncertain parameters both individually and in interaction with other parameters. The results measure the model response (e.g., variance in the output) to uncertainty in the selected input. Investigation into the important uncertain parameters in turn yields insights into important phenomena for accident progression and off-site consequences. This uncertainty analysis confirmed the known importance of some parameters, such as failure rate of the Safety Relief Valve in accident progression modeling and the dry deposition velocity in off-site consequence modeling. The analysis also revealed some new insights, such as dependent effect of cesium chemical form for different accident progressions. (auth)

  6. Peach Bottom Atomic Power Station recirc pipe dose rates with zinc injection and condenser replacement

    SciTech Connect

    DiCello, D.C.; Odell, A.D.; Jackson, T.J.

    1995-03-01

    Peach Bottom Atomic Power Station (PBAPS) is located near the town of Delta, Pennsylvania, on the west bank of the Susquehanna River. It is situated approximately 20 miles south of Lancaster, Pennsylvania. The site contains two boiling water reactors of General Electric design and each rated at 3,293 megawatts thermal. The units are BWR 4s and went commercial in 1977. There is also a decommissioned high temperature gas-cooled reactor on site, Unit 1. PBAPS Unit 2 recirc pipe was replaced in 1985 and Unit 3 recirc pipes replaced in 1988 with 326 NGSS. The Unit 2 replacement pipe was electropolished, and the Unit 3 pipe was electropolished and passivated. The Unit 2 brass condenser was replaced with a Titanium condenser in the first quarter of 1991, and the Unit 3 condenser was replaced in the fourth quarter of 1991. The admiralty brass condensers were the source of natural zinc in both units. Zinc injection was initiated in Unit 2 in May 1991, and in Unit 3 in May 1992. Contact dose rate measurements were made in standard locations on the 28-inch recirc suction and discharge lines to determine the effectiveness of zinc injection and to monitor radiation build-up in the pipe. Additionally, HPGe gamma scans were performed to determine the isotopic composition of the oxide layer inside the pipe. In particular, the specific ({mu}Ci/cm{sup 2}) of Co-60 and Zn-65 were analyzed.

  7. Characterization plan for Fort St. Vrain and Peach Bottom graphite fuels

    SciTech Connect

    Maarschman, S.C.; Berting, F.M.; Clemmer, R.G.; Gilbert, E.R.; Guenther, R.J.; Morgan, W.C.; Sliva, P.

    1993-09-01

    Part of Fort St. Vrain (FSV) and most of the Peach Bottom (PB) reactor spent fuels are currently stored at INEL and may remain in storage for many years before disposal. Three disposal pathways have been proposed: intact disposal, fuels partially disassembled and the high-level waste fraction conditioned prior to disposal, and fuels completed disassembled and conditioned prior to disposal. Many options exist within each of these pathways. PNL evaluated the literature and other reference to develop a fuels characterization plan for these fuels. This plan provides guidance for the characteristics of the fuel which will be needed to pursue any of the storage or disposal pathways. It also provides a suggested fuels monitoring program for the current storage facilities. This report recommends a minimum of 7 fuel elements be characterized: PB Core 1 fuel: one Type II nonfailed element, one Type II failed element, and one Type III nonfailed element; PB Core 2 fuel: two Type II nonfailed fuel elements; and FSV fuel: at least two fuel blocks from regions of high temperature and fluence and long in-reactor performance (preferably at reactor end-of- life). Selection of PB fuel elements should focus on these between radial core position 8 and 14 and on compacts between compact numbers 10 and 20. Selection of FSV fuel elements should focus on these from Fuel Zones II and III, located in Core Layers 6, 7, and possibly 8.

  8. Peach Bottom BWR Turbine Trip Benchmark Analyses with RETRAN-3D and CORETRAN

    SciTech Connect

    Barten, W.; Ferroukhi, H.; Coddington, P.

    2004-10-15

    This paper presents results from Paul Scherrer Institut (PSI) on the three phases of the Peach Bottom Boiling Water Reactor Turbine Trip Benchmark. The first part of the paper presents the PSI analysis using RETRAN-3D of Phase 1, where the system pressure is predicted based on a predefined core power distribution. These calculations elucidate the importance of accurate modeling of the steam separator region and of nonequilibrium effects. In the second part, the CORETRAN results of Phase 2 are summarized and the core 3-D response to the pressurization transient prior to SCRAM is discussed. The CORETRAN results show a slight axial flux redistribution toward the top of the core, while radially a flux redistribution is observed toward core regions with assemblies that are initially moderately voided and where the axial power shape is increasingly top-peaked. The impact of the control rod configuration as well as the assembly coolant inventory dynamics on the 3-D flux redistribution is also discussed. The third part presents results of the Phase 3 calculation using RETRAN-3D, which is a culmination of the analytical work of Phases 1 and 2.

  9. SENTINEL{trademark} technical basis report for Peach Bottom. Final report

    SciTech Connect

    1998-04-01

    PECO Energy in cooperation with the Electric Power Research Institute (EPRI) installed the SENTINEL{trademark} software at its Peach Bottom Atomic Power Station (PBAPS). This software incorporates models of the safety and support systems which are used to display the defense in depth present in the plant and a quantitative assessment of the plant risks during proposed on-line maintenance. During the past nine months, PECO Energy personnel have used this display to evaluate the safety of proposed on-line maintenance schedules. The report describes the motivation for and the development of the SENTINEL software. It describes the generation of Safety Function Assessment Trees and Plant Transient Assessment Trees and their use in evaluating the level of defense-in-depth of key plant safety functions and the susceptibility of the plant to critical transient events. Their results are displayed by color indicators ranging from green, through yellow and orange, to red to show increasingly hazardous conditions. The report describes the use of the PBAPS Probabilistic Safety Assessment within the SENTINEL code to calculate an instantaneous core damage frequency and the criteria by which this frequency is translated to a color indicator.

  10. Molecular characterization of a novel luteovirus from peach identified by high-throughput sequencing.

    PubMed

    Wu, L-P; Liu, H-W; Bateman, M; Liu, Z; Li, R

    2017-05-26

    Contigs with sequence homologies to cherry-associated luteovirus were identified by high-throughput sequencing analysis in two peach accessions. Complete genomic sequences of the two isolates of this virus were determined to be 5,819 and 5,814 nucleotides long, respectively. The genome of the new virus is typical of luteoviruses, containing eight open reading frames in a very similar arrangement. Its genomic sequence is 58-74% identical to those of other members of the genus Luteovirus. These sequences thus belong to a new virus, which we have named "peach-associated luteovirus".

  11. Molecular characterization of a novel Luteovirus from peach identified by high-throughput sequencing

    USDA-ARS?s Scientific Manuscript database

    Contigs with sequence homologies to Cherry-associated luteovirus were identified by high-throughput sequencing analysis of two peach accessions undergoing quarantine testing. The complete genomic sequences of the two isolates of this virus are 5,819 and 5,814 nucleotides. Their genome organization i...

  12. Fabrication of ORNL Fuel Irradiated in the Peach Bottom Reactor and Postirradiation Examination of Recycle Test Elements 7 and 4

    SciTech Connect

    Long, Jr. E.L.

    2001-10-25

    Seven full-sized Peach Bottom Reactor. fuel elements were fabricated in a cooperative effort by Oak Ridge National Laboratory (ORNL) and Gulf General Atomic (GGA) as part of the National HTGR Fuel Recycle Development Program. These elements contain bonded fuel rods and loose beds of particles made from several combinations of fertile and fissile particles of interest for present and future use in the High-Temperature Gas-Cooled Reactor (HTGR). The portion of the fuel prepared for these elements by ORNL is described in detail in this report, and it is in conjunction with the GGA report (GA-10109) a complete fabrication description of the test. In addition, this report describes the results obtained to date from postirradiation examination of the first two elements removed from the Peach Bottom Reactor, RTE-7 and -4. The fuel examined had relatively low exposure, up to about 1.5 x 10{sup 21} neutrons/cm* fast (>0.18 MeV) fluence, compared with the peak anticipated HTGR fluence of 8.0 x 10{sup 21}, but it has performed well at this exposure. Dimensional data indicate greater irradiation shrinkage than expected from accelerated test data to higher exposures. This suggests that either the method of extrapolation of the higher exposure data back to low exposure is faulty, or the behavior of the coated particles in the neutron spectrum characteristic of the accelerated tests does not adequately represent the behavior in an HTGR spectrum.

  13. RELAP5-3D Analysis of Pressure Perturbation at the Peach Bottom BWR During Low-Flow Stability Tests

    SciTech Connect

    Lombardi Costa, Antonella; Petruzzi, Alessandro; D'Auria, Francesco

    2006-07-01

    Experimental and theoretical studies about the BWR (Boiling Water Reactor) stability have been performed to design a stable core configuration. BWR instabilities can be caused by inter-dependencies between thermal-hydraulic and reactivity feedback parameters such as the void-coefficient, for example, during a pressure perturbation event. In the present work, the pressure perturbation is considered in order to study in detail this type of transient. To simulate this event, including the strong feedback effects between core neutronic and reactor thermal-hydraulics, and to verify core behavior and evaluate parameters related to safety, RELAP5-3D code has been used in the analyses. The simulation was performed making use of Peach Bottom-2 BWR data to predict the dynamics of a real reactor during this type of event. Stability tests were conducted in the Peach Bottom 2 BWR, in 1977, and were done along the low-flow end of the rated power-flow line, and along the power-flow line corresponding to minimum recirculation pump speed. The calculated results are herein compared against the available experimental data. (authors)

  14. Fuel Summary for Peach Bottom Unit 1 High-Temperature Gas-Cooled Reactor Cores 1 and 2

    SciTech Connect

    Karel I. Kingrey

    2003-04-01

    This fuel summary report contains background and summary information for the Peach Bottom Unit 1, High-Temperature, Gas-Cooled Reactor Cores 1 and 2. This report contains detailed information about the fuel in the two cores, the Peach Bottom Unit 1 operating history, nuclear parameters, physical and chemical characteristics, and shipping and storage canister related data. The data in this document have been compiled from a large number of sources and are not qualified beyond the qualification of the source documents. This report is intended to provide an overview of the existing data pertaining to spent fuel management and point to pertinent reference source documents. For design applications, the original source documentation must be used. While all referenced sources are available as records or controlled documents at the Idaho National Engineering and Environmental Laboratory (INEEL), some of the sources were marked as informal or draft reports. This is noted where applicable. In some instances, source documents are not consistent. Where they are known, this document identifies those instances and provides clarification where possible. However, as stated above, this document has not been independently qualified and such clarifications are only included for information purposes. Some of the information in this summary is available in multiple source documents. An effort has been made to clearly identify at least one record document as the source for the information included in this report.

  15. Cultivar identification, pedigree verification, and diversity analysis among Peach (Prunus persica L. Batsch) Cultivars based on Simple Sequence Repeat markers

    USDA-ARS?s Scientific Manuscript database

    The genetic relationships and pedigree inferences among peach (Prunus persica (L.) Batsch) accessions and breeding lines used in genetic improvement were evaluated using 15 simple sequence repeat (SSR) markers. A total of 80 alleles were detected among the 37 peach accessions with an average of 5.53...

  16. Environmental radionuclide concentrations in the vicinity of the peach bottom atomic power station: 1985-1986. Data report

    SciTech Connect

    Domotor, S.L.; McLean, R.I.

    1989-07-01

    High-resolution gamma spectroscopy was used to determine radionuclide concentrations in over 450 biota and sediment samples collected from the Susquehanna River-Chesapeake Bay system in the vicinity of the Peach Bottom Atomic Power Station (PBAPS) during 1985-1986. Low concentrations of PBAPS-related radionuclides (Zn65, Cs-134, and Cs-137) were detected in finfish, mussels, and crayfish. These PBAPS-related radionuclides and Co-60 were also detected in sediments. I-131 attributable to the Chernobyl reactor accident (April 26, 1986) was detected in environmental samples collected in May 1986. PBAPS-related radionuclide concentrations in biota and sediments represent small increments to the Susquehanna River-Chesapeake Bay system relative to natural and weapons test levels; radionuclide releases by PBAPS, and radiation doses to man, are well within regulatory limits.

  17. Analysis of the Peach Bottom Turbine Trip 2 Experiment by Coupled RELAP5-PARCS Three-Dimensional Codes

    SciTech Connect

    Bousbia-Salah, Anis; Vedovi, Juswald; D'Auria, Francesco; Ivanov, Kostadin; Galassi, Giorgio

    2004-10-15

    Thanks to continuous progress in computer technology, it is now possible to perform best-estimate simulations of complex scenarios in nuclear power plants. This method is carried out through the coupling of three-dimensional (3-D) neutron modeling of a reactor core into system codes. It is particularly appropriate for transients that involve strong interactions between core neutronics and reactor loop thermal hydraulics. For this purpose, the Peach Bottom boiling water reactor turbine trip test was selected to challenge the capability of such coupled codes. The test is characterized by a power excursion induced by rapid core pressurization and a self-limiting course behavior. In order to perform the closest simulation, the coupled thermal-hydraulic system code RELAP5 and 3-D neutron kinetic code PARCS were used. The obtained results are compared to those available from experimental data. Overall, the coupled code calculations globally predict the most significant observed aspects of the transient, such as the pressure wave amplitude across the core and the power course, with an acceptable agreement. However, sensitivity studies revealed that more-accurate code models should be considered in order to better match the void dynamic and the cross-section variations during transient conditions.

  18. SOARCA Peach Bottom Atomic Power Station Long-Term Station Blackout Uncertainty Analysis: Convergence of the Uncertainty Results

    SciTech Connect

    Bixler, Nathan E.; Osborn, Douglas M.; Sallaberry, Cedric Jean-Marie; Eckert-Gallup, Aubrey Celia; Mattie, Patrick D.; Ghosh, S. Tina

    2014-02-01

    This paper describes the convergence of MELCOR Accident Consequence Code System, Version 2 (MACCS2) probabilistic results of offsite consequences for the uncertainty analysis of the State-of-the-Art Reactor Consequence Analyses (SOARCA) unmitigated long-term station blackout scenario at the Peach Bottom Atomic Power Station. The consequence metrics evaluated are individual latent-cancer fatality (LCF) risk and individual early fatality risk. Consequence results are presented as conditional risk (i.e., assuming the accident occurs, risk per event) to individuals of the public as a result of the accident. In order to verify convergence for this uncertainty analysis, as recommended by the Nuclear Regulatory Commission’s Advisory Committee on Reactor Safeguards, a ‘high’ source term from the original population of Monte Carlo runs has been selected to be used for: (1) a study of the distribution of consequence results stemming solely from epistemic uncertainty in the MACCS2 parameters (i.e., separating the effect from the source term uncertainty), and (2) a comparison between Simple Random Sampling (SRS) and Latin Hypercube Sampling (LHS) in order to validate the original results obtained with LHS. Three replicates (each using a different random seed) of size 1,000 each using LHS and another set of three replicates of size 1,000 using SRS are analyzed. The results show that the LCF risk results are well converged with either LHS or SRS sampling. The early fatality risk results are less well converged at radial distances beyond 2 miles, and this is expected due to the sparse data (predominance of “zero” results).

  19. Environmental radionuclide concentrations in the vicinity of the Calvert Cliffs Nuclear Power Plant and the Peach Bottom Atomic Power station: 1995

    SciTech Connect

    Jones, T.S.; Frithsen, J.B.; McLean, R.I.

    1997-02-01

    The Maryland Power Plant Research Program monitors concentrations of natural, weapons, and power plant produced radionuclides in environmental samples collected from the Chesapeake Bay in the vicinity of the Calvert Cliffs Nuclear Power Plant (CCNPP) and from the Susquehanna River-Chesapeake Bay system in the vicinity of Peach Bottom Atomic Power Station (PBAPS). The purpose of this monitoring is to determine the fate, transport, and potential effects of power plant produced radionuclides. Radionuclide concentrations in shellfish, finfish, aquatic vegetation, and sediment were measured using high-resolution gamma spectrometry. Radionuclides in environmental samples originated from natural sources, atmospheric weapons testing, and normal operations of CCNPP and PBAPS.

  20. Mutation rate analysis via parent–progeny sequencing of the perennial peach. II. No evidence for recombination-associated mutation

    PubMed Central

    Zhang, Yanchun; Qin, Chao

    2016-01-01

    Mutation rates and recombination rates vary between species and between regions within a genome. What are the determinants of these forms of variation? Prior evidence has suggested that the recombination might be mutagenic with an excess of new mutations in the vicinity of recombination break points. As it is conjectured that domesticated taxa have higher recombination rates than wild ones, we expect domesticated taxa to have raised mutation rates. Here, we use parent–offspring sequencing in domesticated and wild peach to ask (i) whether recombination is mutagenic, and (ii) whether domesticated peach has a higher recombination rate than wild peach. We find no evidence that domesticated peach has an increased recombination rate, nor an increased mutation rate near recombination events. If recombination is mutagenic in this taxa, the effect is too weak to be detected by our analysis. While an absence of recombination-associated mutation might explain an absence of a recombination–heterozygozity correlation in peach, we caution against such an interpretation. PMID:27798307

  1. Release of radionuclides and chelating agents from cement-solidified decontamination low-level radioactive waste collected from the Peach Bottom Atomic Power Station Unit 3

    SciTech Connect

    Akers, D.W.; Kraft, N.C.; Mandler, J.W.

    1994-03-01

    As part of a study being performed for the Nuclear Regulatory Commission (NRC), small-scale waste-form specimens were collected during a low oxidation-state transition-metal ion (LOMI)-nitric permanganate (NP)-LOMI solidification performed in October 1989 at the Peach Bottom Atomic Power Station Unit 3. The purpose of this program was to evaluate the performance of cement-solidified decontamination waste to meet the low-level waste stability requirements defined in the NRC`s ``Technical Position on Waste Form,`` Revision 1. The samples were acquired and tested because little data have been obtained on the physical stability of actual cement-solidified decontamination ion-exchange resin waste forms and on the leachability of radionuclides and chelating agents from those waste forms. The Peach Bottom waste-form specimens were subjected to compressive strength, immersion, and leach testing in accordance with the NRC`s ``Technical Position on Waste Form,`` Revision 1. Results of this study indicate that the specimens withstood the compression tests (>500 psi) before and after immersion testing and leaching, and that the leachability indexes for all radionuclides, including {sup 14}C, {sup 99}{Tc}, and {sup 129}I, are well above the leachability index requirement of 6.0, required by the NRC`s ``Technical Position on Waste Form,`` Revision 1.

  2. Complete nucleotide sequences of two isolates of cherry green ring mottle virus from peach (Prunus persica) in China.

    PubMed

    Wang, Lihui; Jiang, Dongmei; Niu, Feiqing; Lu, Meiguang; Wang, Hongqing; Li, Shifang

    2013-03-01

    Two complete nucleotide sequences of cherry green ring mottle virus (CGRMV) isolated from peach in Hebei (Hs10) and Fujian (F9) Provinces, China, were determined. Five open reading frames (ORFs) were found in the genomes of both isolates. The F9 and Hs10 isolates shared 82.2 % and 83.4-94.4 % nucleotide sequence identity, respectively, with two CGRMV isolates from cherry. Analysis of the nucleotide and amino acid sequences from the five ORFs of both isolates showed that Hs10 shares the greatest sequence identity with P1A (GenBank AJ291761) from cherry. Phylogenetic analysis indicated that CGRMV isolates from peach and cherry are closely related to members of the genus Foveavirus.

  3. In-depth sequencing of the siRNAs associated with peach latent mosaic viroid infection

    PubMed Central

    2010-01-01

    Background It has been observed that following viroid infection, there is an accumulation of viroid-derived siRNAs in infected plants. Some experimental results suggest that these small RNAs may be produced by the plant defense system to protect it from infection, indicating that viroids can elicit the RNA-silencing pathways. The objective of this study is to identify in the peach latent mosaic viroid (PLMVd), a model RNA genome, the regions that are most susceptible to RNA interference machinery. Results The RNA isolated from an infected tree have been used to sequence in parallel viroid species and small non-coding RNA species. Specifically, PLMVd RNAs were amplified, cloned and sequenced according to a conventional approach, while small non-coding RNAs were determined by high-throughput sequencing. The first led to the typing of 18 novel PLMVd variants. The second provided a library of small RNAs including 880 000 sequences corresponding to PLMVd-derived siRNAs, which makes up 11.2% of the sequences of the infected library. These siRNAs contain mainly 21-22 nucleotide RNAs and are equivalently distributed between the plus and the minus polarities of the viroid. They cover the complete viroid genome, although the amount varies depending on the regions. These regions do not necessarily correlate with the double-stranded requirement to be a substrate for Dicer-like enzymes. We noted that some sequences encompass the hammerhead self-cleavage site, indicating that the circular conformers could be processed by the RNA-silencing machinery. Finally, a bias in the relative abundance of the nature of the 5' nucleotides was observed (A, U >> G, C). Conclusions The approach used provided us a quantitative representation of the PLMVd-derived siRNAs retrieved from infected peach trees. These siRNAs account for a relatively large proportion of the small non-coding RNAs. Surprisingly, the siRNAs from some regions of the PLMVd genome appear over-represented, although these

  4. Environmental radionuclide concentrations in the vicinity of the Calvert Cliffs Nuclear Power Plant and the Peach Bottom Atomic Power Station: 1996--1997. Final report

    SciTech Connect

    McLean, R.I.; Jones, T.S.

    1998-11-20

    The Maryland Power Plant Research Program monitors concentrations of natural, weapons, and power plant produced radionuclides in environmental samples collected from the Chesapeake Bay in the vicinity of the Calvert Cliffs Nuclear Power Plant (CCNPP) and from the Susquehanna River-Chesapeake Bay system in the vicinity of Peach Bottom Atomic Power Station (PBAPS). The purpose of this monitoring is to determine the fate, transport, and potential effects of power plant-produced radionuclides. This report contains a description of monitoring activities and data collected during the 1996 and 1997 calendar years. Radionuclide concentrations in shellfish, finfish, aquatic vegetation, and sediment were measured using high-resolution gamma spectrometry. Radionuclides in environmental samples originated from natural sources, historic atmospheric weapons testing, and normal operations of CCNPP and PBAPS.

  5. Bottom profiling by correlating beam-steered noise sequences.

    PubMed

    Harrison, Chris H; Siderius, Martin

    2008-03-01

    It has already been established that by cross-correlating ambient noise time series received on the upward and downward steered beams of a drifting vertical array one can obtain a subbottom layer profile. Strictly, the time differential of the cross correlation is the impulse response of the seabed. Here it is shown theoretically and by simulation that completely uncorrelated surface noise results in a layer profile with predictable amplitudes proportional to those of an equivalent echo sounder at the same depth as the array. The phenomenon is simulated by representing the sound sources as multiple random time sequences emitted from random locations in a horizontal plane above a vertical array and then accounting for the travel times of the direct and bottom reflected paths. A well-defined correlation spike is seen at the depth corresponding to the bottom reflection despite the fact that the sound sources contain no structure whatsoever. The effects of using simultaneously steered upward and downward conical beams with a tilted or faceted seabed and multiple layers are also investigated by simulation. Experimental profiles are obtained using two different vertical arrays in smooth and rough bottom sites in the Mediterranean. Correlation peak amplitudes follow the theory and simulations closely.

  6. A test program for predicting and monitoring the emergency diesel generator heat exchangers at Limerick Generating Station and Peach Bottom Atomic Power Station

    SciTech Connect

    Elder, J.J.; Fusegni, L.J.; McFarland, W.J.; Andreone, C.F.

    1995-12-31

    The USNRC issued Generic Letter 89-13, ``Service Water Problems Affecting Safety-Related Equipment`` to all nuclear power plant licensees which requires the implementation of a program to ensure that nuclear safety-related heat exchangers are capable of performing their intended functions. The heat exchangers on the standby emergency diesel generator (EDG) skids are covered by this requirement. PECo and SWEC have developed a program of testing and analysis to monitor the level of fouling in the EDG`s at the Limerick and Peach Bottom nuclear power plants in response to the Generic Letter. The development of an EDG heat exchanger test program is significantly more complex than for most other heat exchangers. This is because the process fluid flows are controlled by self-modulating thermostatic valves to maintain proper process temperature setpoints. As a result, under some test conditions the process flows may be reduced to as little as 20% of their design values. Flow changes of this magnitude significantly affect the performance of the coolers and obscure observation of the effects of fouling if not properly addressed. This paper describes the methods developed by PECo and SWEC to address this problem.

  7. Complete nucleotide sequence and genome organization of peach virus D, a putative new member of the genus Marafivirus.

    PubMed

    Igori, Davaajargal; Lim, Seungmo; Baek, Dasom; Kim, San Yeong; Seo, Euncheol; Cho, In-Sook; Choi, Gug-Seoun; Lim, Hyoun-Sub; Moon, Jae Sun

    2017-06-01

    The complete nucleotide sequence of peach virus D (PeVD) from Prunus persica was determined. The PeVD genome consists of 6,612 nucleotides excluding the 3' poly(A) tail and contains a single open reading frame coding for a polyprotein of 227 kDa. Sequence comparisons and phylogenetic analysis revealed that PeVD is most closely related to viruses in the genus Marafivirus, family Tymoviridae. The complete nucleotide and CP amino acid sequences of PeVD were most similar (51.1-57.8% and 32.2-48.0%, respectively) to members of the genus Marafivirus, suggesting that PeVD is a new member of this genus.

  8. Identification of miRNAs and their target genes in peach (Prunus persica L.) using high-throughput sequencing and degradome analysis.

    PubMed

    Luo, Xiaoyan; Gao, Zhihong; Shi, Ting; Cheng, Zongming; Zhang, Zhen; Ni, Zhaojun

    2013-01-01

    MicroRNAs play critical roles in various biological and metabolic processes. The function of miRNAs has been widely studied in model plants such as Arabidopsis and rice. However, the number of identified miRNAs and related miRNA targets in peach (Prunus persica) is limited. To understand further the relationship between miRNAs and their target genes during tissue development in peach, a small RNA library and three degradome libraries were constructed from three tissues for deep sequencing. We identified 117 conserved miRNAs and 186 novel miRNA candidates in peach by deep sequencing and 19 conserved miRNAs and 13 novel miRNAs were further evaluated for their expression by RT-qPCR. The number of gene targets that were identified for 26 conserved miRNA families and 38 novel miRNA candidates, were 172 and 87, respectively. Some of the identified miRNA targets were abundantly represented as conserved miRNA targets in plant. However, some of them were first identified and showed important roles in peach development. Our study provides information concerning the regulatory network of miRNAs in peach and advances our understanding of miRNA functions during tissue development.

  9. Identification of miRNAs and Their Target Genes in Peach (Prunus persica L.) Using High-Throughput Sequencing and Degradome Analysis

    PubMed Central

    Shi, Ting; Cheng, Zongming; Zhang, Zhen; Ni, Zhaojun

    2013-01-01

    MicroRNAs play critical roles in various biological and metabolic processes. The function of miRNAs has been widely studied in model plants such as Arabidopsis and rice. However, the number of identified miRNAs and related miRNA targets in peach (Prunus persica) is limited. To understand further the relationship between miRNAs and their target genes during tissue development in peach, a small RNA library and three degradome libraries were constructed from three tissues for deep sequencing. We identified 117 conserved miRNAs and 186 novel miRNA candidates in peach by deep sequencing and 19 conserved miRNAs and 13 novel miRNAs were further evaluated for their expression by RT-qPCR. The number of gene targets that were identified for 26 conserved miRNA families and 38 novel miRNA candidates, were 172 and 87, respectively. Some of the identified miRNA targets were abundantly represented as conserved miRNA targets in plant. However, some of them were first identified and showed important roles in peach development. Our study provides information concerning the regulatory network of miRNAs in peach and advances our understanding of miRNA functions during tissue development. PMID:24236092

  10. Heterogeneity in the entire genome for three genotypes of peach [Prunus persica (L.) Batsch] as distinguished from sequence analysis of genomic variants.

    PubMed

    Fresnedo-Ramírez, Jonathan; Martínez-García, Pedro J; Parfitt, Dan E; Crisosto, Carlos H; Gradziel, Thomas M

    2013-11-01

    Peach [Prunus persica (L.) Batsch] is an economically important fruit crop that has become a genetic-genomic model for all Prunus species in the family Rosaceae. A doubled haploid reference genome sequence length of 227.3 Mb, a narrow genetic base contrasted by a wide phenotypic variability, the generation of cultivars through hybridization with subsequent clonal propagation, and the current accessibility of many founder genotypes, as well as the pedigree of modern commercial cultivars make peach a model for the study of inter-cultivar genomic heterogeneity and its shaping by artificial selection. The quantitative genomic differences among the three genotypes studied as genomic variants, included small variants (SNPs and InDels) and structural variants (SV) (duplications, inversions and translocations). The heirloom cultivar 'Georgia Belle' and an almond by peach introgression breeding line 'F8,1-42' are more heterogeneous than is the modern cultivar 'Dr. Davis' when compared to the peach reference genome ('Lovell'). A pair-wise comparison of consensus genome sequences with 'Lovell' showed that 'F8,1-42' and 'Georgia Belle' were more divergent than were 'Dr. Davis' and 'Lovell'. A novel application of emerging bioinformatics tools to the analysis of ongoing genome sequencing project outputs has led to the identification of a range of genomic variants. Results can be used to delineate the genomic and phenotypic differences among peach genotypes. For crops such as fruit trees, the availability of old cultivars, breeding selections and their pedigrees, make them suitable models for the study of genome shaping by artificial selection. The findings from the study of such genomic variants can then elucidate the control of pomological traits and the characterization of metabolic pathways, thus facilitating the development of protocols for the improvement of Prunus crops.

  11. Complete nucleotide sequences of the genomes of two isolates of apple chlorotic leaf spot virus from peach (Prunus persica) in China.

    PubMed

    Niu, Feiqing; Pan, Song; Wu, Zujian; Jiang, Dongmei; Li, Shifang

    2012-04-01

    The complete nucleotide sequences of two isolates of apple chlorotic leaf spot virus (Z1 and Z3) collected from peach in Henan Province, China, were determined. The genomes of both Z1 and Z3 were found to contain three open reading frames (ORFs). Sequence analysis showed that genomic sequences of Z1 and Z3 isolates shared 67.4%-82.9% and 67.2%-82.6% identity, respectively, with the other eight isolates of ACLSV that have been reported previously. Based on the putative amino acid sequences of the products of the three ORFs, Z1 and Z3 isolates showed the greatest identity to isolate PBM1 (GenBank accession number AJ243438) from plum and the least identity with isolate Ta Tao5 (GenBank Accession Number: EU223295) from peach. Considering the low level of sequence identity between Z1/Z3 isolate and Ta Tao5 isolate, two types of ACLSV may exist in peach.

  12. Genome Sequencing of the Plant Pathogen Taphrina deformans, the Causal Agent of Peach Leaf Curl

    PubMed Central

    Cissé, Ousmane H.; Almeida, João M. G. C. F.; Fonseca, Álvaro; Kumar, Ajay Anand; Salojärvi, Jarkko; Overmyer, Kirk; Hauser, Philippe M.; Pagni, Marco

    2013-01-01

    ABSTRACT Taphrina deformans is a fungus responsible for peach leaf curl, an important plant disease. It is phylogenetically assigned to the Taphrinomycotina subphylum, which includes the fission yeast and the mammalian pathogens of the genus Pneumocystis. We describe here the genome of T. deformans in the light of its dual plant-saprophytic/plant-parasitic lifestyle. The 13.3-Mb genome contains few identifiable repeated elements (ca. 1.5%) and a relatively high GC content (49.5%). A total of 5,735 protein-coding genes were identified, among which 83% share similarities with other fungi. Adaptation to the plant host seems reflected in the genome, since the genome carries genes involved in plant cell wall degradation (e.g., cellulases and cutinases), secondary metabolism, the hallmark glyoxylate cycle, detoxification, and sterol biosynthesis, as well as genes involved in the biosynthesis of plant hormones. Genes involved in lipid metabolism may play a role in its virulence. Several locus candidates for putative MAT cassettes and sex-related genes akin to those of Schizosaccharomyces pombe were identified. A mating-type-switching mechanism similar to that found in ascomycetous yeasts could be in effect. Taken together, the findings are consistent with the alternate saprophytic and parasitic-pathogenic lifestyles of T. deformans. PMID:23631913

  13. Identification of Known and Novel microRNAs and Their Targets in Peach (Prunus persica) Fruit by High-Throughput Sequencing

    PubMed Central

    2016-01-01

    MicroRNAs (miRNAs) are a group of non-coding RNAs that have functions in post-transcriptional gene regulation in plants. Although the most important economic component of peach trees (Prunus persica) is the fruit, not much is known about miRNAs in this organ. In this study, miRNAs and their targets were identified and characterized from libraries of small RNAs of peach fruit through Solexa based-sequencing and bioinformatics approaches. A total of 557 known peach miRNAs belonging to 34 miRNA families were identified, and some of these miRNAs were found to be highly conserved in at least four other plant species. Using the most current criteria for miRNA annotation, 275 putative novel miRNAs were predicted, and the sequencing frequencies of these novel miRNAs were less than those of the conserved miRNAs. In total, 3959 and 1614 target genes for 349 known and 193 novel miRNAs, respectively, were predicted with the criteria that a single target gene can be targeted by different miRNAs and that a single miRNA can also have a large number of target genes. Three targets were even found to be targeted by 13 novel miRNAs that contained the same complete miRNA sequence at different locations and had different scaffolds. The proteins predicted to be targeted by the miRNAs identified in this study encompass a wide range of transcription factors and are involved in many biological processes and pathways, including development, metabolism, stress responses and signal transduction. A total of 115 and 101 target genes were identified to be cleaved by 60 known miRNAs and 27 novel miRNAs through degradome sequencing, respectively. These miRNAs induce cleavage of their targets precisely at the position between nucleotides 10 and 11 of the miRNA sequences from the 5’ to the 3’ end. Thirty conserved miRNAs and 19 novel miRNAs exhibited differential expression profiles in the peach, and the expression patterns of some miRNAs appeared to be tissue- or developmental stage

  14. Identification of Known and Novel microRNAs and Their Targets in Peach (Prunus persica) Fruit by High-Throughput Sequencing.

    PubMed

    Zhang, Chunhua; Zhang, Binbin; Ma, Ruijuan; Yu, Mingliang; Guo, Shaolei; Guo, Lei; Korir, Nicholas Kibet

    2016-01-01

    MicroRNAs (miRNAs) are a group of non-coding RNAs that have functions in post-transcriptional gene regulation in plants. Although the most important economic component of peach trees (Prunus persica) is the fruit, not much is known about miRNAs in this organ. In this study, miRNAs and their targets were identified and characterized from libraries of small RNAs of peach fruit through Solexa based-sequencing and bioinformatics approaches. A total of 557 known peach miRNAs belonging to 34 miRNA families were identified, and some of these miRNAs were found to be highly conserved in at least four other plant species. Using the most current criteria for miRNA annotation, 275 putative novel miRNAs were predicted, and the sequencing frequencies of these novel miRNAs were less than those of the conserved miRNAs. In total, 3959 and 1614 target genes for 349 known and 193 novel miRNAs, respectively, were predicted with the criteria that a single target gene can be targeted by different miRNAs and that a single miRNA can also have a large number of target genes. Three targets were even found to be targeted by 13 novel miRNAs that contained the same complete miRNA sequence at different locations and had different scaffolds. The proteins predicted to be targeted by the miRNAs identified in this study encompass a wide range of transcription factors and are involved in many biological processes and pathways, including development, metabolism, stress responses and signal transduction. A total of 115 and 101 target genes were identified to be cleaved by 60 known miRNAs and 27 novel miRNAs through degradome sequencing, respectively. These miRNAs induce cleavage of their targets precisely at the position between nucleotides 10 and 11 of the miRNA sequences from the 5' to the 3' end. Thirty conserved miRNAs and 19 novel miRNAs exhibited differential expression profiles in the peach, and the expression patterns of some miRNAs appeared to be tissue- or developmental stage-specific. The

  15. Characteristics of potential repository wastes: Volume 4, Appendix 4A, Nuclear reactors at educational institutions of the United States; Appendix 4B, Data sheets for nuclear reactors at educational institutions; Appendix 4C, Supplemental data for Fort St. Vrain spent fuel; Appendix 4D, Supplemental data for Peach Bottom 1 spent fuel; Appendix 4E, Supplemental data for Fast Flux Test Facility

    SciTech Connect

    Not Available

    1992-07-01

    Volume 4 contains the following appendices: nuclear reactors at educational institutions in the United States; data sheets for nuclear reactors at educational institutions in the United States(operational reactors and shut-down reactors); supplemental data for Fort St. Vrain spent fuel; supplemental data for Peach Bottom 1 spent fuel; and supplemental data for Fast Flux Test Facility.

  16. Characteristics of potential repository wastes: Volume 4, Appendix 4A, Nuclear reactors at educational institutions of the United States; Appendix 4B, Data sheets for nuclear reactors at educational institutions; Appendix 4C, Supplemental data for Fort St. Vrain spent fuel; Appendix 4D, Supplemental data for Peach Bottom 1 spent fuel; Appendix 4E, Supplemental data for Fast Flux Test Facility

    SciTech Connect

    Not Available

    1992-07-01

    Volume 4 contains the following appendices: nuclear reactors at educational institutions in the United States; data sheets for nuclear reactors at educational institutions in the United States(operational reactors and shut-down reactors); supplemental data for Fort St. Vrain spent fuel; supplemental data for Peach Bottom 1 spent fuel; and supplemental data for Fast Flux Test Facility.

  17. Technical evaluation report (Revision 1) on the proposed design modifications and technical specification changes on grid voltage degradation for the Peach Bottom Atomic Power Station, Units 2 and 3

    SciTech Connect

    Selan, J.C.

    1983-03-11

    This report is a revision of the technical evaluation documented in a separate report dated November 3, 1981 (UCID-19115) on the proposed design modification and Technical Specification changes for the protection of the Class 1E equipment from grid voltage degradation for the Peach Bottom Atomic Power Station, Units 2 and 3. The review criteria are based on several IEEE standards and The Code of Federal Regulations. The evaluation compares the submittals made by the plant with the NRC staff positions and the review criteria. The evaluation finds that the proposed design modifications and the required changes to the Technical Specifications will ensure that the Class 1E equipment will be protected from sustained voltage degradation.

  18. Genome-Wide Identification of miRNAs Responsive to Drought in Peach (Prunus persica) by High-Throughput Deep Sequencing

    PubMed Central

    Eldem, Vahap; Çelikkol Akçay, Ufuk; Ozhuner, Esma; Bakır, Yakup; Uranbey, Serkan; Unver, Turgay

    2012-01-01

    Peach (Prunus persica L.) is one of the most important worldwide fresh fruits. Since fruit growth largely depends on adequate water supply, drought stress is considered as the most important abiotic stress limiting fleshy fruit production and quality in peach. Plant responses to drought stress are regulated both at transcriptional and post-transcriptional level. As post-transcriptional gene regulators, miRNAs (miRNAs) are small (19–25 nucleotides in length), endogenous, non-coding RNAs. Recent studies indicate that miRNAs are involved in plant responses to drought. Therefore, Illumina deep sequencing technology was used for genome-wide identification of miRNAs and their expression profile in response to drought in peach. In this study, four sRNA libraries were constructed from leaf control (LC), leaf stress (LS), root control (RC) and root stress (RS) samples. We identified a total of 531, 471, 535 and 487 known mature miRNAs in LC, LS, RC and RS libraries, respectively. The expression level of 262 (104 up-regulated, 158 down-regulated) of the 453 miRNAs changed significantly in leaf tissue, whereas 368 (221 up-regulated, 147 down-regulated) of the 465 miRNAs had expression levels that changed significantly in root tissue upon drought stress. Additionally, a total of 197, 221, 238 and 265 novel miRNA precursor candidates were identified from LC, LS, RC and RS libraries, respectively. Target transcripts (137 for LC, 133 for LS, 148 for RC and 153 for RS) generated significant Gene Ontology (GO) terms related to DNA binding and catalytic activites. Genome-wide miRNA expression analysis of peach by deep sequencing approach helped to expand our understanding of miRNA function in response to drought stress in peach and Rosaceae. A set of differentially expressed miRNAs could pave the way for developing new strategies to alleviate the adverse effects of drought stress on plant growth and development. PMID:23227166

  19. Genome-wide identification of miRNAs responsive to drought in peach (Prunus persica) by high-throughput deep sequencing.

    PubMed

    Eldem, Vahap; Çelikkol Akçay, Ufuk; Ozhuner, Esma; Bakır, Yakup; Uranbey, Serkan; Unver, Turgay

    2012-01-01

    Peach (Prunus persica L.) is one of the most important worldwide fresh fruits. Since fruit growth largely depends on adequate water supply, drought stress is considered as the most important abiotic stress limiting fleshy fruit production and quality in peach. Plant responses to drought stress are regulated both at transcriptional and post-transcriptional level. As post-transcriptional gene regulators, miRNAs (miRNAs) are small (19-25 nucleotides in length), endogenous, non-coding RNAs. Recent studies indicate that miRNAs are involved in plant responses to drought. Therefore, Illumina deep sequencing technology was used for genome-wide identification of miRNAs and their expression profile in response to drought in peach. In this study, four sRNA libraries were constructed from leaf control (LC), leaf stress (LS), root control (RC) and root stress (RS) samples. We identified a total of 531, 471, 535 and 487 known mature miRNAs in LC, LS, RC and RS libraries, respectively. The expression level of 262 (104 up-regulated, 158 down-regulated) of the 453 miRNAs changed significantly in leaf tissue, whereas 368 (221 up-regulated, 147 down-regulated) of the 465 miRNAs had expression levels that changed significantly in root tissue upon drought stress. Additionally, a total of 197, 221, 238 and 265 novel miRNA precursor candidates were identified from LC, LS, RC and RS libraries, respectively. Target transcripts (137 for LC, 133 for LS, 148 for RC and 153 for RS) generated significant Gene Ontology (GO) terms related to DNA binding and catalytic activities. Genome-wide miRNA expression analysis of peach by deep sequencing approach helped to expand our understanding of miRNA function in response to drought stress in peach and Rosaceae. A set of differentially expressed miRNAs could pave the way for developing new strategies to alleviate the adverse effects of drought stress on plant growth and development.

  20. Development of sequence-tagged site markers linked to the pillar growth type in peach (Prunus persica)

    USDA-ARS?s Scientific Manuscript database

    In peach [Prunus persica (L.) Batsch], trees showing columnar [also termed pillar or broomy] growth habit are of interest for high density production systems. While the selection of the columnar homozygote (pillar) phenotype (brbr) can be carried out prior to field planting, the intermediate hetero...

  1. Genotyping by Sequencing for SNP-Based Linkage Map Construction and QTL Analysis of Chilling Requirement and Bloom Date in Peach [Prunus persica (L.) Batsch

    PubMed Central

    Bielenberg, Douglas Gary; Rauh, Bradley; Fan, Shenghua; Gasic, Ksenija; Abbott, Albert Glenn; Reighard, Gregory Lynn; Okie, William R.; Wells, Christina Elizabeth

    2015-01-01

    Low-cost, high throughput genotyping methods are crucial to marker discovery and marker-assisted breeding efforts, but have not been available for many ‘specialty crops’ such as fruit and nut trees. Here we apply the Genotyping-By-Sequencing (GBS) method developed for cereals to the discovery of single nucleotide polymorphisms (SNPs) in a peach F2 mapping population. Peach is a genetic and genomic model within the Rosaceae and will provide a template for the use of this method with other members of this family. Our F2 mapping population of 57 genotypes segregates for bloom time (BD) and chilling requirement (CR) and we have extensively phenotyped this population. The population derives from a selfed F1 progeny of a cross between ‘Hakuho’ (high CR) and ‘UFGold’ (low CR). We were able to successfully employ GBS and the TASSEL GBS pipeline without modification of the original methodology using the ApeKI restriction enzyme and multiplexing at an equivalent of 96 samples per Illumina HiSeq 2000 lane. We obtained hundreds of SNP markers which were then used to construct a genetic linkage map and identify quantitative trait loci (QTL) for BD and CR. PMID:26430886

  2. Genotyping by Sequencing for SNP-Based Linkage Map Construction and QTL Analysis of Chilling Requirement and Bloom Date in Peach [Prunus persica (L.) Batsch].

    PubMed

    Bielenberg, Douglas Gary; Rauh, Bradley; Fan, Shenghua; Gasic, Ksenija; Abbott, Albert Glenn; Reighard, Gregory Lynn; Okie, William R; Wells, Christina Elizabeth

    2015-01-01

    Low-cost, high throughput genotyping methods are crucial to marker discovery and marker-assisted breeding efforts, but have not been available for many 'specialty crops' such as fruit and nut trees. Here we apply the Genotyping-By-Sequencing (GBS) method developed for cereals to the discovery of single nucleotide polymorphisms (SNPs) in a peach F2 mapping population. Peach is a genetic and genomic model within the Rosaceae and will provide a template for the use of this method with other members of this family. Our F2 mapping population of 57 genotypes segregates for bloom time (BD) and chilling requirement (CR) and we have extensively phenotyped this population. The population derives from a selfed F1 progeny of a cross between 'Hakuho' (high CR) and 'UFGold' (low CR). We were able to successfully employ GBS and the TASSEL GBS pipeline without modification of the original methodology using the ApeKI restriction enzyme and multiplexing at an equivalent of 96 samples per Illumina HiSeq 2000 lane. We obtained hundreds of SNP markers which were then used to construct a genetic linkage map and identify quantitative trait loci (QTL) for BD and CR.

  3. Development and Characterization of Novel Microsatellite Markers for the Peach Fruit Moth Carposina sasakii (Lepidoptera: Carposinidae) Using Next-Generation Sequencing

    PubMed Central

    Wang, You-Zhu; Cao, Li-Jun; Zhu, Jia-Ying; Wei, Shu-Jun

    2016-01-01

    The peach fruit moth Carposina sasakii is an economically important pest on dozens of fruits from Rosaceae and Rhamnaceae in Northeast Asia. We developed novel microsatellite markers for C. sasakii from randomly sequenced regions of the genome using next-generation sequencing. In total, 95,153 microsatellite markers were isolated from 4.70 GB genomic sequences. Thirty-five polymorphic markers were developed by assessing in 63 individuals from two geographical populations. The allele numbers ranged from 2 to 9 with an average value of 4.60 per locus, while the polymorphism information content ranged from 0.075 to 0.696 with an average value of 0.407. Furthermore, the observed and expected heterozygosity varied from 0.000 to 0.677 and 0.062 to 0.771, respectively. The microsatellites developed provide abundant molecular markers for investigating genetic structure, genetic diversity, and existence of host-plant associated biotypes of C. sasakii. PMID:26999103

  4. Deep RNA-Seq uncovers the peach transcriptome landscape.

    PubMed

    Wang, Lu; Zhao, Shuang; Gu, Chao; Zhou, Ying; Zhou, Hui; Ma, Juanjuan; Cheng, Jun; Han, Yuepeng

    2013-11-01

    Peach (Prunus persica) is one of the most important of deciduous fruit trees worldwide. To facilitate isolation of genes controlling important horticultural traits of peach, transcriptome sequencing was conducted in this study. A total of 133 million pair-end RNA-Seq reads were generated from leaf, flower, and fruit, and 90 % of reads were mapped to the peach draft genome. Sequence assembly revealed 1,162 transcription factors and 2,140 novel transcribed regions (NTRs). Of these 2,140 NTRs, 723 contain an open reading frame, while the rest 1,417 are non-coding RNAs. A total of 9,587 SNPs were identified across six peach genotypes, with an average density of one SNP per ~5.7 kb. The top of chromosome 2 has higher density of expressed SNPs than the rest of the peach genome. The average density of SSR is 312.5/Mb, with tri-nucleotide repeats being the most abundant. Most of the detected SSRs are AT-rich repeats and the most common di-nucleotide repeat is CT/TC. The predominant type of alternative splicing (AS) events in peach is exon-skipping isoforms, which account for 43 % of all the observed AS events. In addition, the most active transcribed regions in peach genome were also analyzed. Our study reveals for the first time the complexity of the peach transcriptome, and our results will be helpful for functional genomics research in peach.

  5. Cytogenetic and molecular characterization of a highly repeated DNA sequence in the peach potato aphid Myzus persicae.

    PubMed

    Mandrioli, M; Bizzaro, D; Manicardi, G C; Gionghi, D; Bassoli, L; Bianchi, U

    1999-12-01

    Electrophoresis following digestion of Myzus persicae genomic DNA with HindIII showed the presence of a prominent band of approximately 200 bp whereas a faint electrophoretic band corresponding to DNA fragments of about 3000 bp was observed after digestion with ApaI. In situ digestion with restriction enzymes, followed by in situ nick translation, showed that ApaI targets are localized at the nucleolus organizer-bearing X telomeric region, whereas HindIII restriction sites are clustered in intercalary C-positive areas on the same X chromosome. Fluorescent in situ hybridization (FISH) carried out by using digoxygenin-labeled HindIII repeats as probe fully confirmed overlapping between the hybridization sites of this probe and the AT-rich intercalary heterochromatic bands on the X chromosome. These findings, together with published data, allow us to conclude that the M. persicae genome possesses three classes of C-positive heterochromatin: (i) a GC-rich argentophilic band located on one telomere of the X chromosome that contains ApaI targets; (ii) AT-rich intercalary bands located on the X chromosome containing clustered HindIII fragments; (iii) AT-rich telomeric bands located on autosomes, consisting of HaeIII repeats. Molecular analysis has shown that the length of the HindIII repeat consensus sequence is 189 bp with an AT content of 67%. Southern blotting with HindIII monomers revealed a regular ladder of bands composed of multimers of basic length that are characteristic of satellite DNAs. The HindIII repeat displays other features typical of eukaryotic satellite arrays such as overlapping with heterochromatic bands and a high degree of sequence similarity among monomers (84%-94%). A similarity plot showed that sequences were particularly variable in the 50-100 bp region whereas they proved to be highly conservative in the first 50 bp, thus suggesting that this portion of the repeat might be functionally important.

  6. Genome-wide characterization and selection of expressed sequence tag simple sequence repeat primers for optimized marker distribution and reliability in peach

    USDA-ARS?s Scientific Manuscript database

    Expressed sequence tag (EST) simple sequence repeats (SSRs) in Prunus were mined, and flanking primers designed and used for genome-wide characterization and selection of primers to optimize marker distribution and reliability. A total of 12,618 contigs were assembled from 84,727 ESTs, along with 34...

  7. Using the "bottom-up and outside-in" sequence for panfacial fracture management: does it provide a clinical significance?

    PubMed

    de Melo, Willian Morais; Sonoda, Celso Koogi; Shinohara, Elio Hitoshi; Garcia, Idelmo Rangel

    2013-01-01

    Panfacial fractures usually refer to simultaneous facial fractures, which affect the upper, middle, and lower thirds of the face. The management of panfacial fracture is complex because of the lack of reliable landmarks. Literature has shown many approaches for management of panfacial fractures. Every segment of bone has a precise function in the repair. Therefore, the "bottom-up and outside-in" sequence is the most widely used approach in the management of panfacial fractures. These facial fractures present remarkable challenges for both experienced and inexperienced surgeons. This article aimed to report a case of a panfacial fracture (mandibular condylar and symphysis fractures associated with an atypical Le Fort III fracture) in a 48-year-old man. The patient was successfully treated using bottom-up and outside-in sequence by accessing all facial injuries. Postoperatively, radiograph examination revealed good reduction and fixation of titanium plates, and physical examination revealed good functional and esthetic outcomes.

  8. Eugenol bloom thinner on peach

    USDA-ARS?s Scientific Manuscript database

    Peaches must be thinned to obtain annual crops of marketable size fruit. Traditionally, peach thinning has been accomplished by hand in the absence of reliable chemical thinners. Peach thinning is a labor intensive, expensive cultural practice. Previous studies in our lab have demonstrated that e...

  9. Population survey of phytoseiid mites and spider mites on peach leaves and wild plants in Japanese peach orchard.

    PubMed

    Wari, David; Yamashita, Jun; Kataoka, Yoko; Kohara, Yoko; Hinomoto, Norihide; Kishimoto, Hidenari; Toyoshima, Shingo; Sonoda, Shoji

    2014-07-01

    A population survey of phytoseiid mites and spider mites was conducted on peach leaves and wild plants in Japanese peach orchards having different pesticide practices. The phytoseiid mite species composition on peach leaves and wild plants, as estimated using quantitative sequencing, changed during the survey period. Moreover, it varied among study sites. The phytoseiid mite species compositions were similar between peach leaves and some wild plants, such as Veronica persica, Paederia foetida, Persicaria longiseta, and Oxalis corniculata with larger quantities of phytoseiid mites, especially after mid-summer. A PCR-based method to detect the ribosomal ITS sequences of Tetranychus kanzawai and Panonychus mori from phytoseiid mites was developed. Results showed that Euseius sojaensis (specialized pollen feeder/generalist predator) uses both spider mites as prey in the field.

  10. 76 FR 37842 - Environmental Assessment and Finding of No Significant Impact Related to Exemption for the Peach...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-28

    ... From the Federal Register Online via the Government Publishing Office NUCLEAR REGULATORY COMMISSION Environmental Assessment and Finding of No Significant Impact Related to Exemption for the Peach... security requirements in 10 CFR part 73 and 10 CFR 50.54(p) for the Peach Bottom Atomic Power Station...

  11. Venturia carpophila draft genome sequence

    USDA-ARS?s Scientific Manuscript database

    Venturia carpophila causes peach scab, a disease that renders peach fruit unmarketable. We report a high-quality draft genome sequence (36.9 Mb) of V. carpophila from an isolate collected from a peach tree in central Georgia in the United States. The genome sequence described will be a useful resour...

  12. GulfSnow Peach

    USDA-ARS?s Scientific Manuscript database

    GulfSnow peach is jointly released for grower trial by the U.S. Department of Agriculture, Agricultural Research Service (Byron, GA), Georgia Agricultural Experiment Station and Florida Agricultural Experiment Station. GulfSnow was previously tested as AP06-09W and originated from a cross of AP98-3...

  13. Top-Down-Assisted Bottom-Up Method for Homologous Protein Sequencing: Hemoglobin from 33 Bird Species

    NASA Astrophysics Data System (ADS)

    Song, Yang; Laskay, Ünige A.; Vilcins, Inger-Marie E.; Barbour, Alan G.; Wysocki, Vicki H.

    2015-11-01

    Ticks are vectors for disease transmission because they are indiscriminant in their feeding on multiple vertebrate hosts, transmitting pathogens between their hosts. Identifying the hosts on which ticks have fed is important for disease prevention and intervention. We have previously shown that hemoglobin (Hb) remnants from a host on which a tick fed can be used to reveal the host's identity. For the present research, blood was collected from 33 bird species that are common in the U.S. as hosts for ticks but that have unknown Hb sequences. A top-down-assisted bottom-up mass spectrometry approach with a customized searching database, based on variability in known bird hemoglobin sequences, has been devised to facilitate fast and complete sequencing of hemoglobin from birds with unknown sequences. These hemoglobin sequences will be added to a hemoglobin database and used for tick host identification. The general approach has the potential to sequence any set of homologous proteins completely in a rapid manner.

  14. Characterization of peach thaumatin-like proteins and their identification as major peach allergens.

    PubMed

    Palacín, A; Tordesillas, L; Gamboa, P; Sanchez-Monge, R; Cuesta-Herranz, J; Sanz, M L; Barber, D; Salcedo, G; Díaz-Perales, A

    2010-09-01

    Peach is the most important fruit related to food allergy in the Mediterranean area. Pru p 3, its lipid transfer protein, has been described as the principal allergen responsible for cross-reactivities with other foods and pollen and the severity of clinical symptoms. However, the involvement of other allergenic families cannot be ruled out. Thaumatin-like proteins (TLPs) have been described as food allergen in several fruits, such as apple, cherry, kiwi and banana, and pollen. To identify members of the TLP family in peach fruit and to characterize putative allergens. Through two-dimensional (2D) electrophoresis of peach extract and immunodetections with a pool of peach-allergic patients, IgE-binding spots were identified and the corresponding proteins purified and characterized as allergens by in vitro and in vivo assays. Three isoforms, belonging to the TLP family, were purified by different chromatographic systems and characterized by N-terminal amino acid sequences, molecular weight determination (MALDI) and enzymatic activity analysis (beta-1,3-gluconase test and inhibition growth of fungi). In the same way, their IgE-binding capacity and allergenic activity were tested by ELISA assays, basophil activation tests and skin prick tests (SPT). Two peach-TLPs, Pru p 2.0101 and Pru p 2.0201, were identified as IgE-binding spots by 2D electrophoresis. Another peach-TLP, Pru p 2.0301, was cloned and produced as recombinant protein in a yeast system. The three isoforms were purified and characterized as TLPs by immunoblotting with anti-chestnut TLP antibodies and anti-plant N-asparagine complex glycan (anti-cross-reactive carbohydrate determinant). All of them showed beta-1,3-glucanase activity and inhibition of fungal growth. The three TLPs were recognized by around 50% of the sera from 31 patients analysed in ELISA experiments. All three gave a positive response to an SPT and/or in basophil activation experiments. Three isoforms, belonging to the TLP family, were

  15. The last frontier? High-resolution, near-bottom measurements of the Hawaiian Jurassic magnetic anomaly sequence

    NASA Astrophysics Data System (ADS)

    Tivey, M.; Tominaga, M.; Sager, W. W.

    2012-12-01

    different spreading centers. In 2011, we undertook the next generation of near-bottom magnetic studies utilizing new autonomous underwater vehicle (AUV) technology (Sentry) and concurrent deeptow and seismic profiling surveys of the Hawaiian anomaly sequence. Preliminary results show a similar anomaly record to the Japanese sequence: an overall decrease in anomaly amplitude from M19 to M38 and a period of low amplitude, which in turn is preceded by a return to stronger amplitude anomalies. The magnetic anomaly correlations between Hawaiian and Japanese sea-surface level profiles confirm the reversal record back in time, at least, to M38. At the mid-water and near-bottom AUV levels, the magnetic data clearly show the short-wavelength anomaly character of the M29-M38 sequence, indicating that the fast reversals observed in the Japanese lineations are also present in the Hawaiian lineation set. The strong similarity of overall anomaly patterns between Japanese and Hawaiian sequences supports the preliminary conclusion that geomagnetic field behavior during the Jurassic was dynamic, with fast reversals and changing intensity, and certainly not "quiet". Finally, AUV surveys provide measurements of the marine magnetic anomaly record whose resolution is limited only by the crustal recording process and crustal magnetic architecture rather than spatial resolution.

  16. New strategies for thinning peaches

    USDA-ARS?s Scientific Manuscript database

    An evaluation of two mechanical thinners was conducted in four commercial peach orchard blocks in 2007. A mechanical blossom thinner designed by a German grower for thinning apple trees that employed nylon cords (strings) to remove blossoms was tested on peach trees trained to either a perpendicula...

  17. The faintest stars - The luminosity and mass functions at the bottom of the main sequence

    NASA Technical Reports Server (NTRS)

    Tinney, Christopher G.

    1993-01-01

    We present IR K-band photometry of complete samples of VLM candidates constructed from IIIaF and IVN plates in 10 fields taken as part of the POSSII and UKSRC surveys. Using the I-K colors constructed for these stars we estimate a bolometric luminosity function which extends to M(Bol) = 13.75. We find significant evidence for a luminosity function decreasing toward these luminosities. We also find that our results are consistent with those of studies based on the Nearby Star sample, when those data are presented as a bolometric luminosity function. We convert our observed luminosity function into a mass function, which extends with reasonable statistics to 0.08 solar masses - the H-burning minimum mass. We find significant evidence for features in the mass function at these masses. Specifically, the mass function 'turns over' at 0.25 solar mass, goes through a local minimum at about 0.15 solar mass, and may increase again below 0.1 solar mass - none of these features are predicted by any of the current theories of star formation. Lastly, the mass density we observe just above the H-burning minimum mass makes it difficult to envisage brown dwarfs contributing significant quantities of missing mass without invoking either a mass function in this region significantly steeper than that seen for main-sequence stars, or an extremely low cutoff mass to the mass function.

  18. Effect of Particle Orientation during Thermal Processing of Canned Peach Halves: A CFD Simulation

    PubMed Central

    Dimou, Adreas; Stoforos, Nikolaos G.; Yanniotis, Stavros

    2014-01-01

    The objective of this work was to apply Computational Fluid Dynamics (CFD) to study the effect of particle orientation on fluid flow, temperature evolution, as well as microbial destruction, during thermal processing of still cans filled with peach halves in sugar syrup. A still metal can with four peach halves in 20% sugar syrup was heated at 100 °C for 20 min and thereafter cooled at 20 °C. Infinite heat transfer coefficient between heating medium and external can wall was considered. Peach halves were orderly placed inside the can with the empty space originally occupied by the kernel facing, in all peaches, either towards the top or the bottom of the can. In a third situation, the can was placed horizontally. Simulations revealed differences on particle temperature profiles, as well as process F values and critical point location, based on their orientation. At their critical points, peach halves with the kernel space facing towards the top of the can heated considerably slower and cooled faster than the peaches having their kernel space facing towards the bottom of the can. The horizontal can case exhibited intermediate cooling but the fastest heating rates and the highest F process values among the three cases examined. The results of this study could be used in designing of thermal processes with optimal product quality. PMID:28234321

  19. The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution.

    PubMed

    Verde, Ignazio; Abbott, Albert G; Scalabrin, Simone; Jung, Sook; Shu, Shengqiang; Marroni, Fabio; Zhebentyayeva, Tatyana; Dettori, Maria Teresa; Grimwood, Jane; Cattonaro, Federica; Zuccolo, Andrea; Rossini, Laura; Jenkins, Jerry; Vendramin, Elisa; Meisel, Lee A; Decroocq, Veronique; Sosinski, Bryon; Prochnik, Simon; Mitros, Therese; Policriti, Alberto; Cipriani, Guido; Dondini, Luca; Ficklin, Stephen; Goodstein, David M; Xuan, Pengfei; Del Fabbro, Cristian; Aramini, Valeria; Copetti, Dario; Gonzalez, Susana; Horner, David S; Falchi, Rachele; Lucas, Susan; Mica, Erica; Maldonado, Jonathan; Lazzari, Barbara; Bielenberg, Douglas; Pirona, Raul; Miculan, Mara; Barakat, Abdelali; Testolin, Raffaele; Stella, Alessandra; Tartarini, Stefano; Tonutti, Pietro; Arús, Pere; Orellana, Ariel; Wells, Christina; Main, Dorrie; Vizzotto, Giannina; Silva, Herman; Salamini, Francesco; Schmutz, Jeremy; Morgante, Michele; Rokhsar, Daniel S

    2013-05-01

    Rosaceae is the most important fruit-producing clade, and its key commercially relevant genera (Fragaria, Rosa, Rubus and Prunus) show broadly diverse growth habits, fruit types and compact diploid genomes. Peach, a diploid Prunus species, is one of the best genetically characterized deciduous trees. Here we describe the high-quality genome sequence of peach obtained from a completely homozygous genotype. We obtained a complete chromosome-scale assembly using Sanger whole-genome shotgun methods. We predicted 27,852 protein-coding genes, as well as noncoding RNAs. We investigated the path of peach domestication through whole-genome resequencing of 14 Prunus accessions. The analyses suggest major genetic bottlenecks that have substantially shaped peach genome diversity. Furthermore, comparative analyses showed that peach has not undergone recent whole-genome duplication, and even though the ancestral triplicated blocks in peach are fragmentary compared to those in grape, all seven paleosets of paralogs from the putative paleoancestor are detectable.

  20. Peach (Prunus persica L.).

    PubMed

    Sabbadini, Silvia; Pandolfini, Tiziana; Girolomini, Luca; Molesini, Barbara; Navacchi, Oriano

    2015-01-01

    Until now, the application of genetic transformation techniques in peach has been limited by the difficulties in developing efficient regeneration and transformation protocols. Here we describe an efficient regeneration protocol for the commercial micropropagation of GF677 rootstock (Prunus persica × Prunus amygdalus). The method is based on the production, via organogenesis, of meristematic bulk tissues characterized by a high competence for shoot regeneration. This protocol has also been used to obtain GF677 plants genetically engineered with an empty hairpin cassette (hereafter indicated as hp-pBin19), through Agrobacterium tumefaciens-mediated transformation. After 7-8 months of selection on media containing kanamycin, we obtained two genetically modified GF677 lines. PCR and Southern blot analyses were performed to confirm the genetic status.

  1. A Unique Mutation in a MYB Gene Cosegregates with the Nectarine Phenotype in Peach

    PubMed Central

    Dondini, Luca; Pacheco, Igor; Dettori, Maria Teresa; Gazza, Laura; Scalabrin, Simone; Strozzi, Francesco; Tartarini, Stefano; Bassi, Daniele; Verde, Ignazio; Rossini, Laura

    2014-01-01

    Nectarines play a key role in peach industry; the fuzzless skin has implications for consumer acceptance. The peach/nectarine (G/g) trait was described as monogenic and previously mapped on chromosome 5. Here, the position of the G locus was delimited within a 1.1 cM interval (635 kb) based on linkage analysis of an F2 progeny from the cross ‘Contender’ (C, peach) x ‘Ambra’ (A, nectarine). Careful inspection of the genes annotated in the corresponding genomic sequence (Peach v1.0), coupled with variant discovery, led to the identification of MYB gene PpeMYB25 as a candidate for trichome formation on fruit skin. Analysis of genomic re-sequencing data from five peach/nectarine accessions pointed to the insertion of a LTR retroelement in exon 3 of the PpeMYB25 gene as the cause of the recessive glabrous phenotype. A functional marker (indelG) developed on the LTR insertion cosegregated with the trait in the CxA F2 progeny and was validated on a broad panel of genotypes, including all known putative donors of the nectarine trait. This marker was shown to efficiently discriminate between peach and nectarine plants, indicating that a unique mutational event gave rise to the nectarine trait and providing a useful diagnostic tool for early seedling selection in peach breeding programs. PMID:24595269

  2. Genome-wide identification and analysis of FK506-binding protein gene family in peach (Prunus persica).

    PubMed

    Zhang, Yanping; Han, Jan; Liu, Dan; Wen, Xicheng; Li, Yu; Tao, Ran; Peng, Yongbin; Fang, Jinggui; Wang, Chen

    2014-02-25

    The FKBP protein family has prolyl isomerase activity and is related in function to cyclophilins. FKBPs are known to be involved in many biological processes including hormone signaling, plant growth, and stress responses through a chaperone or an isomerization of proline residues during protein folding. The availability of complete peach genome sequences allowed the identification of 21 FKBP genes by HMMER and BLAST analyses. Scaffold locations of these FKBP genes in the peach genome were determined and the protein domain and motif organization of peach FKBPs were analyzed. The phylogenetic relationships between peach FKBPs were also assessed. The expression profiles of peach FKBP gene results revealed that most peach FKBPs were expressed in all tissues, while a few peach FKBPs were specifically expressed in some of the tissues. This data could contribute to better understanding of the complex regulation of the peach FKBP gene family, and also provide valuable information for further research in peach functional genomics. Copyright © 2013 Elsevier B.V. All rights reserved.

  3. Cloning and characterization of a non-TIR-NBS-LRR type disease resistance gene analogue from peach.

    PubMed

    Liang, Feng-Shan; Kong, Fan-Na; Zhou, Chun-Jiang; Cao, Peng-Xiu; Ye, Chun-Jiang; Wang, Bin

    2005-04-01

    Cloning of plant disease resistant genes is greatly helpful for disease resistant breeding in plants and the insight of resistance mechanism. However, there are less relevant researches in peach [prunus persica (L.) Batch]. In this study, four NBS-LRR type resistance gene analogs (RGAs) were cloned from genomic DNA of peach. The PNBS2 fragment was also amplified from peach cDNA and the full-length cDNA of PNBS2 (PRPM1, GenBank accession no. AY599223) has been cloned. Sequence analysis indicated that the cDNA of PRPM1 is 3007 bp in length and that the contained ORF encodes for a polypeptide of 917 amino acids. Compared with known NBS-LRR genes, it presented relatively high amino acid sequence identity. The polypeptide has typical structure of non-TIR-NBS-LRR genes, with NB-ARC, LZ, LRR and transmembrane domains. Southern analysis indicated that the PRPM1 gene might be a single copy in peach genome. Northern blot and RT-PCR analysis showed that the expression of PRPM1 was not induced by salicylic acid (SA) in peach young leaves. The isolation of putative resistance genes from peach provided useful bases for studying the structure and function of peach disease-resistance relating genes and disease resistant genetic breeding in peach.

  4. Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs

    PubMed Central

    2012-01-01

    Background MicroRNAs (miRNAs) have recently emerged as important gene regulators in plants. MiRNAs and their targets have been extensively studied in Arabidopsis and rice. However, relatively little is known about the characterization of miRNAs and their target genes in peach (Prunus persica), which is a complex crop with unique developmental programs. Results We performed small RNA deep sequencing and identified 47 peach-specific and 47 known miRNAs or families with distinct expression patterns. Together, the identified miRNAs targeted 80 genes, many of which have not been reported previously. Like the model plant systems, peach has two of the three conserved trans-acting siRNA biogenesis pathways with similar mechanistic features and target specificity. Unique to peach, three of the miRNAs collectively target 49 MYBs, 19 of which are known to regulate phenylpropanoid metabolism, a key pathway associated with stone hardening and fruit color development, highlighting a critical role of miRNAs in the regulation of peach fruit development and ripening. We also found that the majority of the miRNAs were differentially regulated in different tissues, in part due to differential processing of miRNA precursors. Up to 16% of the peach-specific miRNAs were differentially processed from their precursors in a tissue specific fashion, which has been rarely observed in plant cells. The miRNA precursor processing activity appeared not to be coupled with its transcriptional activity but rather acted independently in peach. Conclusions Collectively, the data characterizes the unique expression pattern and processing regulation of peach miRNAs and demonstrates the presence of a complex, multi-level miRNA regulatory network capable of targeting a wide variety of biological functions, including phenylpropanoid pathways which play a multifaceted spatial-temporal role in peach fruit development. PMID:22909020

  5. Unique expression, processing regulation, and regulatory network of peach (Prunus persica) miRNAs.

    PubMed

    Zhu, Hong; Xia, Rui; Zhao, Bingyu; An, Yong-qiang; Dardick, Chris D; Callahan, Ann M; Liu, Zongrang

    2012-08-21

    MicroRNAs (miRNAs) have recently emerged as important gene regulators in plants. MiRNAs and their targets have been extensively studied in Arabidopsis and rice. However, relatively little is known about the characterization of miRNAs and their target genes in peach (Prunus persica), which is a complex crop with unique developmental programs. We performed small RNA deep sequencing and identified 47 peach-specific and 47 known miRNAs or families with distinct expression patterns. Together, the identified miRNAs targeted 80 genes, many of which have not been reported previously. Like the model plant systems, peach has two of the three conserved trans-acting siRNA biogenesis pathways with similar mechanistic features and target specificity. Unique to peach, three of the miRNAs collectively target 49 MYBs, 19 of which are known to regulate phenylpropanoid metabolism, a key pathway associated with stone hardening and fruit color development, highlighting a critical role of miRNAs in the regulation of peach fruit development and ripening. We also found that the majority of the miRNAs were differentially regulated in different tissues, in part due to differential processing of miRNA precursors. Up to 16% of the peach-specific miRNAs were differentially processed from their precursors in a tissue specific fashion, which has been rarely observed in plant cells. The miRNA precursor processing activity appeared not to be coupled with its transcriptional activity but rather acted independently in peach. Collectively, the data characterizes the unique expression pattern and processing regulation of peach miRNAs and demonstrates the presence of a complex, multi-level miRNA regulatory network capable of targeting a wide variety of biological functions, including phenylpropanoid pathways which play a multifaceted spatial-temporal role in peach fruit development.

  6. Genome-wide association study of 12 agronomic traits in peach.

    PubMed

    Cao, Ke; Zhou, Zhengkui; Wang, Qi; Guo, Jian; Zhao, Pei; Zhu, Gengrui; Fang, Weichao; Chen, Changwen; Wang, Xinwei; Wang, Xiaoli; Tian, Zhixi; Wang, Lirong

    2016-11-08

    Peach (Prunus persica L.) is a highly valuable crop species and is recognized by molecular researchers as a model fruit for the Rosaceae family. Using whole-genome sequencing data generated from 129 peach accessions, here we perform a comprehensive genome-wide association study for 12 key agronomic traits. We show that among the 10 qualitative traits investigated, nine exhibit consistent and more precise association signals than previously identified by linkage analysis. For two of the qualitative traits, we describe candidate genes, one potentially involved in cell death and another predicted to encode an auxin-efflux carrier, that are highly associated with fruit shape and non-acidity, respectively. Furthermore, we find that several genomic regions harbouring association signals for fruit weight and soluble solid content overlapped with predicted selective sweeps that occurred during peach domestication and improvement. Our findings contribute to the large-scale characterization of genes controlling agronomic traits in peach.

  7. Genome-wide association study of 12 agronomic traits in peach

    PubMed Central

    Cao, Ke; Zhou, Zhengkui; Wang, Qi; Guo, Jian; Zhao, Pei; Zhu, Gengrui; Fang, Weichao; Chen, Changwen; Wang, Xinwei; Wang, Xiaoli; Tian, Zhixi; Wang, Lirong

    2016-01-01

    Peach (Prunus persica L.) is a highly valuable crop species and is recognized by molecular researchers as a model fruit for the Rosaceae family. Using whole-genome sequencing data generated from 129 peach accessions, here we perform a comprehensive genome-wide association study for 12 key agronomic traits. We show that among the 10 qualitative traits investigated, nine exhibit consistent and more precise association signals than previously identified by linkage analysis. For two of the qualitative traits, we describe candidate genes, one potentially involved in cell death and another predicted to encode an auxin-efflux carrier, that are highly associated with fruit shape and non-acidity, respectively. Furthermore, we find that several genomic regions harbouring association signals for fruit weight and soluble solid content overlapped with predicted selective sweeps that occurred during peach domestication and improvement. Our findings contribute to the large-scale characterization of genes controlling agronomic traits in peach. PMID:27824331

  8. Characterization of two different apricot latent virus variants associated with peach asteroid spot and peach sooty ringspot diseases.

    PubMed

    Gentit, P; Foissac, X; Svanella-Dumas, L; Peypelut, M; Candresse, T

    2001-08-01

    Peach asteroid spot (PAS) and peach sooty ringspot (PSRS) are two diseases of stone fruit trees of unknown aetiology. The use of a cRNA probe of the newly described Apricot latent virus (ApLV), a tentative member of the Foveavirus genus, indicated the presence of cross-hybridizing agents in PAS isolate LA2 and in PSRS isolates Caserta 12 and Clava J4. Analysis of dsRNA patterns revealed in each case the presence of a major dsRNA band of about 9.6 kbp. The purified dsRNAs were used to obtain cDNA clones for isolates LA2 and Caserta 12. Sequence analysis of a 1.1 kbp cDNA clone from isolate LA2 showed very high homology with the known ApLV sequence, indicating that this isolate represents a closely related variant of ApLV. Sequence analysis of a 3.06 kbp Caserta 12 cDNA clone representing the 3' region of the genome revealed a genomic organization similar to that reported for other members of the Foveavirus genus, including the triple gene block and a large, 43.6 kDa coat protein. Sequence comparison with the CP gene of ApLV, the only sequenced region so far for this virus, showed an overall homology of 78%. These results indicate that the foveavirus represented by the Caserta 12 isolate of PSRS disease may be regarded as a distant variant of ApLV. The present results indicate that the viral agents associated with peach asteroid spot and peach sooty ringspot diseases might be variants of the recently described ApLV.

  9. Development of microsatellite markers in peach [ Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry ( Prunus avium L.).

    PubMed

    Dirlewanger, E.; Cosson, P.; Tavaud, M.; Aranzana, J.; Poizat, C.; Zanetto, A.; Arús, P.; Laigret, F.

    2002-07-01

    We report the sequence of 41 primer pairs of microsatellites from a CT-enriched genomic library of the peach cultivar 'Merrill O'Henry'. Ten microsatellite-containing clones had sequences similar to plant coding sequences in databases and could be used as markers for known functions. For microsatellites segregating at least in one of the two Prunus F(2) progenies analyzed, it was possible to demonstrate Mendelian inheritance. Microsatellite polymorphism was evaluated in 27 peach and 21 sweet cherry cultivars. All primer pairs gave PCR-amplification products on peach and 33 on cherry (80.5%). Six PCR-amplifications revealed several loci (14.6%) in peach and eight (19.5%) in sweet cherry. Among the 33 single-locus microsatellites amplified in peach and sweet cherry, 13 revealed polymorphism both in peach and cherry, 19 were polymorphic only on peach and one was polymorphic only on cherry. The number of alleles per locus ranged from 1 to 9 for peach and from 1 to 6 on sweet cherry with an average of 4.2 and 2.8 in peach and sweet cherry, respectively. Cross-species amplification was tested within the Prunus species: Prunus avium L. (sweet cherry and mazzard), Prunus cerasus L. (sour cherry), Prunus domestica L. (European plum), Prunus amygdalus Batsch. (almond), Prunus armeniaca L. (apricot), Prunus cerasifera Ehrh. (Myrobalan plum). Plants from other genera of the Rosaceae were also tested: Malus (apple) and Fragaria (strawberry), as well as species not belonging to the Rosaceae: Castanea (chestnut tree), Juglans (walnut tree) and Vitis (grapevine). Six microsatellites gave amplification on all the tested species. Among them, one had an amplified region homologous to sequences encoding a MADS-box protein in Malus x domestica. Twelve microsatellites (29.3%) were amplified in all the Rosaceae species tested and 31 (75.6%) were amplified in all the six Prunus species tested. Thirty three (80.5%), 18 (43.9%) and 13 (31.7%) gave amplification on chestnut tree, grapevine

  10. Identification of woolliness response genes in peach fruit after post-harvest treatments.

    PubMed

    González-Agüero, Mauricio; Pavez, Leonardo; Ibáñez, Freddy; Pacheco, Igor; Campos-Vargas, Reinaldo; Meisel, Lee A; Orellana, Ariel; Retamales, Julio; Silva, Herman; González, Mauricio; Cambiazo, Verónica

    2008-01-01

    Woolliness is a physiological disorder of peaches and nectarines that becomes apparent when fruit are ripened after prolonged periods of cold storage. This disorder is of commercial importance since shipping of peaches to distant markets and storage before selling require low temperature. However, knowledge about the molecular basis of peach woolliness is still incomplete. To address this issue, a nylon macroarray containing 847 non-redundant expressed sequence tags (ESTs) from a ripe peach fruit cDNA library was developed and used. Gene expression changes of peach fruit (Prunus persica cv. O'Henry) ripened for 7 d at 21 degrees C (juicy fruit) were compared with those of fruit stored for 15 d at 4 degrees C and then ripened for 7 d at 21 degrees C (woolly fruit). A total of 106 genes were found to be differentially expressed between juicy and woolly fruit. Data analysis indicated that the activity of most of these genes (>90%) was repressed in the woolly fruit. In cold-stored peaches (cv. O'Henry), the expression level of selected genes (cobra, endopolygalacturonase, cinnamoyl-CoA-reductase, and rab11) was lower than in the juicy fruit, and it remained low in woolly peaches after ripening, a pattern that was conserved in woolly fruit from two other commercial cultivars (cv. Flamekist and cv. Elegant Lady). In addition, the results of this study indicate that molecular changes during fruit woolliness involve changes in the expression of genes associated with cell wall metabolism and endomembrane trafficking. Overall, the results reported here provide an initial characterization of the transcriptome activity of peach fruit under different post-harvest treatments.

  11. Interaction between bottom-up and top-down effects during the processing of pitch intervals in sequences of spoken and sung syllables.

    PubMed

    Angenstein, Nicole; Scheich, Henning; Brechmann, André

    2012-07-02

    The processing of pitch intervals may be differentially influenced when musical or speech stimuli carry the pitch information. Most insights into the neural basis of pitch interval processing come from studies on music perception. However, music, in contrast to speech, contains a stable set of pitch intervals. To converge the investigation of pitch interval processing in music and speech, we used sequences of the same spoken or sung syllables. The pitch of these syllables varied either by semitone steps like in music or by smaller intervals. Participants had to differentiate the sequences according to their different sizes of pitch intervals or to the direction of the last frequency step in the sequence. The results depended strongly on the specific task demands. Whereas the interval-size task itself recruited more regions in right lateralized fronto-parietal brain network, stronger activity on semitone than on non-semitone sequences was found in the left hemisphere (mainly in frontal cortex) during this task. These effects were also influenced by the speech mode (spoken or sung syllables). Our findings suggest that the processing of pitch intervals in sequences of syllables depends on an interaction between bottom-up (speech mode, pitch interval) and top-down effects (task). Copyright © 2012 Elsevier Inc. All rights reserved.

  12. Bottom-up study of the MRI positive contrast created by the Off-Resonance Saturation sequence

    NASA Astrophysics Data System (ADS)

    Delangre, S.; Vuong, Q. L.; Henrard, D.; Po, C.; Gallez, B.; Gossuin, Y.

    2015-05-01

    Superparamagnetic iron oxide nanoparticles (SPM particles) are used in MRI to highlight regions such as tumors through negative contrast. Unfortunately, sources as air bubbles or tissues interfaces also lead to negative contrast, which complicates the image interpretation. New MRI sequences creating positive contrast in the particle surrounding, such as the Off-Resonance Saturation sequence (ORS), have thus been developed. However, a theoretical study of the ORS sequence is still lacking, which hampers the optimization of this sequence. For this reason, this work provides a self-consistent analytical expression able to predict the dependence of the contrast on the sequence parameters and the SPM particles properties. This expression was validated by numerical simulations and experiments on agarose gel phantoms on a 11.7 T scanner system. It provides a fundamental understanding of the mechanisms leading to positive contrast, which could allow the improvement of the sequence for future in vivo applications. The influence of the SPM particle relaxivities, the SPM particle concentration, the echo time and the saturation pulse parameters on the contrast were investigated. The best contrast was achieved with SPM particles possessing the smallest transverse relaxivity, an optimal particle concentration and for low echo times.

  13. 21 CFR 145.171 - Artificially sweetened canned peaches.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 2 2014-04-01 2014-04-01 false Artificially sweetened canned peaches. 145.171... § 145.171 Artificially sweetened canned peaches. (a) Artificially sweetened canned peaches is the food which conforms to the definition and standard of identity prescribed for canned peaches by § 145.170(a...

  14. 21 CFR 145.171 - Artificially sweetened canned peaches.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 2 2012-04-01 2012-04-01 false Artificially sweetened canned peaches. 145.171... § 145.171 Artificially sweetened canned peaches. (a) Artificially sweetened canned peaches is the food which conforms to the definition and standard of identity prescribed for canned peaches by § 145.170(a...

  15. Comparative population genomics reveals the domestication history of the peach, Prunus persica, and human influences on perennial fruit crops.

    PubMed

    Cao, Ke; Zheng, Zhijun; Wang, Lirong; Liu, Xin; Zhu, Gengrui; Fang, Weichao; Cheng, Shifeng; Zeng, Peng; Chen, Changwen; Wang, Xinwei; Xie, Min; Zhong, Xiao; Wang, Xiaoli; Zhao, Pei; Bian, Chao; Zhu, Yinling; Zhang, Jiahui; Ma, Guosheng; Chen, Chengxuan; Li, Yanjun; Hao, Fengge; Li, Yong; Huang, Guodong; Li, Yuxiang; Li, Haiyan; Guo, Jian; Xu, Xun; Wang, Jun

    2014-07-31

    Recently, many studies utilizing next generation sequencing have investigated plant evolution and domestication in annual crops. Peach, Prunus persica, is a typical perennial fruit crop that has ornamental and edible varieties. Unlike other fruit crops, cultivated peach includes a large number of phenotypes but few polymorphisms. In this study, we explore the genetic basis of domestication in peach and the influence of humans on its evolution. We perform large-scale resequencing of 10 wild and 74 cultivated peach varieties, including 9 ornamental, 23 breeding, and 42 landrace lines. We identify 4.6 million SNPs, a large number of which could explain the phenotypic variation in cultivated peach. Population analysis shows a single domestication event, the speciation of P. persica from wild peach. Ornamental and edible peach both belong to P. persica, along with another geographically separated subgroup, Prunus ferganensis. Our analyses enhance our knowledge of the domestication history of perennial fruit crops, and the dataset we generated could be useful for future research on comparative population genomics.

  16. Genome-Wide Identification and Analysis of the Type-B Authentic Response Regulator Gene Family in Peach (Prunus persica).

    PubMed

    Zeng, Jingjue; Zhu, Xudong; Haider, Muhammad S; Wang, Xicheng; Zhang, Cheng; Wang, Chen

    2017-01-01

    The type-B authentic response regulator (ARR-B) family members serve as DNA-binding transcriptional regulators, whose activities are probably regulated by phosphorylation/dephosphorylation, resulting in the rapid induction of type-A ARR genes. Type-B ARRs are believed to be involved in many biological processes, including cytokinin signaling, plant growth, and stress responses through a chaperone or by isomerization of proline residues during protein folding. The public availability of complete peach genome sequences allows the identification of 23 ARR-B genes by HMMER and blast analysis. Scaffold locations of these genes in the peach genome were determined, and the protein domain and motif organization of peach type-B ARRs were analyzed. The phylogenetic relationships between peach type-B ARRs were also assessed. The expression profiles of peach ARR-B genes revealed that most of the type-B ARRs showed high expression levels in tissues undergoing rapid cell division and may engage more cytokinins, like half-opened flowers, fruits at expansion stages, and young leaves. These findings not only contribute to a better understanding of the complex regulation of the peach ARR-B gene family, but also provide valuable information for future research in peach functional genomics. © 2017 S. Karger AG, Basel.

  17. The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity.

    PubMed

    Verde, Ignazio; Jenkins, Jerry; Dondini, Luca; Micali, Sabrina; Pagliarani, Giulia; Vendramin, Elisa; Paris, Roberta; Aramini, Valeria; Gazza, Laura; Rossini, Laura; Bassi, Daniele; Troggio, Michela; Shu, Shengqiang; Grimwood, Jane; Tartarini, Stefano; Dettori, Maria Teresa; Schmutz, Jeremy

    2017-03-11

    The availability of the peach genome sequence has fostered relevant research in peach and related Prunus species enabling the identification of genes underlying important horticultural traits as well as the development of advanced tools for genetic and genomic analyses. The first release of the peach genome (Peach v1.0) represented a high-quality WGS (Whole Genome Shotgun) chromosome-scale assembly with high contiguity (contig L50 214.2 kb), large portions of mapped sequences (96%) and high base accuracy (99.96%). The aim of this work was to improve the quality of the first assembly by increasing the portion of mapped and oriented sequences, correcting misassemblies and improving the contiguity and base accuracy using high-throughput linkage mapping and deep resequencing approaches. Four linkage maps with 3,576 molecular markers were used to improve the portion of mapped and oriented sequences (from 96.0% and 85.6% of Peach v1.0 to 99.2% and 98.2% of v2.0, respectively) and enabled a more detailed identification of discernible misassemblies (10.4 Mb in total). The deep resequencing approach fixed 859 homozygous SNPs (Single Nucleotide Polymorphisms) and 1347 homozygous indels. Moreover, the assembled NGS contigs enabled the closing of 212 gaps with an improvement in the contig L50 of 19.2%. The improved high quality peach genome assembly (Peach v2.0) represents a valuable tool for the analysis of the genetic diversity, domestication, and as a vehicle for genetic improvement of peach and related Prunus species. Moreover, the important phylogenetic position of peach and the absence of recent whole genome duplication (WGD) events make peach a pivotal species for comparative genomics studies aiming at elucidating plant speciation and diversification processes.

  18. Breeding in peach, cherry and plum: from a tissue culture, genetic, transcriptomic and genomic perspective.

    PubMed

    Carrasco, Basilio; Meisel, Lee; Gebauer, Marlene; Garcia-Gonzales, Rolando; Silva, Herman

    2013-01-01

    This review is an overview of traditional and modern breeding methodologies being used to develop new Prunus cultivars (stone fruits) with major emphasis on peach, sweet cherry and Japanese plum. To this end, common breeding tools used to produce seedlings, including in vitro culture tools, are discussed. Additionally, the mechanisms of inheritance of many important agronomical traits are described. Recent advances in stone fruit transcriptomics and genomic resources are providing an understanding of the molecular basis of phenotypic variability as well as the identification of allelic variants and molecular markers. These have potential applications for understanding the genetic diversity of the Prunus species, molecular marker-assisted selection and transgenesis. Simple Sequence Repeat (SSR) and Single Nucleotide Polymorphism (SNPs) molecular markers are described as useful tools to describe genetic diversity in peach, sweet cherry and Japanese plum. Additionally, the recently sequenced peach genome and the public release of the sweet cherry genome are discussed in terms of their applicability to breeding programs.

  19. Monilinia Species Causing Brown Rot of Peach in China

    PubMed Central

    Hu, Meng-Jun; Cox, Kerik D.; Schnabel, Guido; Luo, Chao-Xi

    2011-01-01

    In this study, 145 peaches and nectarines displaying typical brown rot symptoms were collected from multiple provinces in China. A subsample of 26 single-spore isolates were characterized phylogenetically and morphologically to ascertain species. Phylogenetic analysis of internal transcribed spacer (ITS) regions 1 and 2, glyceraldehyde-3-phosphate dehydrogenase (G3PDH), β-tubulin (TUB2) revealed the presence of three distinct Monilinia species. These species included Monilinia fructicola, Monilia mumecola, and a previously undescribed species designated Monilia yunnanensis sp. nov. While M. fructicola is a well-documented pathogen of Prunus persica in China, M. mumecola had primarily only been isolated from mume fruit in Japan. Koch's postulates for M. mumecola and M. yunnanensis were fulfilled confirming pathogenicity of the two species on peach. Phylogenetic analysis of ITS, G3PDH, and TUB2 sequences indicated that M. yunnanensis is most closely related to M. fructigena, a species widely prevalent in Europe. Interestingly, there were considerable differences in the exon/intron structure of the cytochrome b (Cyt b) gene between the two species. Morphological characteristics, including spore size, colony morphology, lesion growth rate, and sporulation, support the phylogenetic evidence suggesting the designation of M. yunnanensis as a new species. A new multiplex PCR method was developed to facilitate the detection of M. yunnanensis and differentiation of Monilinia spp. causing brown rot of peach in China. PMID:21980371

  20. High-resolution sequence stratigraphic framework of carbonate deposition controlled by sea level and geostrophic bottom currents, south Florida platform margin

    SciTech Connect

    Locker, S.D.; Hine, A.C. ); Shinn, E.A. )

    1992-01-01

    High-resolution seismic reflection profiles seaward of the Marquesas Keys reveal at least eight late Quaternary sequences which downlap onto the Miocene ( ) age Pourtales Terrace at 250 m water depth. Inferred correlations are presented between these sequences and the last 7--8 sea-level cycles during the past 150 ky. The setting is unusual in that the present reef-rimmed, shallow inner shelf supplies minimal sediment to the adjacent margin where over 30 m of Holocene sediment has accumulated on portions of the outer shelf and slope. Seaward of the inner-shelf reef'' barrier, an outer-shelf terrace in 50--60 m water depth forms the upper boundary of the prograding late Quaternary sequences. These sequences exhibit both current-controlled internal geometries (e.g., sediment drifts) and sea-level controlled features such as lowstand slope erosion, transgressive unconformities, and paleoshorelines or reefs formed during lower stands of sea level. Bottom currents also severely eroded the slope at times, creating prominent unconformities. These 5th-6th order depositional sequences exhibit many features outlined by the Exxon sequence stratigraphy models. Systems tracts inferred from seismic records include lowstand wedge, shelf margin, and highstand deposits. Transgressive systems tracts are more difficult to identify and correspond to the flat outer-shelf terrace that experienced rapid lateral transgressions and regressions of sea level, and was exposed to subaerial processes during low stands. This study provides new insight on the importance of both geostrophic boundary currents and sea-level change in controlling stratigraphic development of a carbonate platform margin. Locally-thick accumulations off the Marquesas Keys may demonstrate sedimentation in response to a persistent cold cyclonic gyre in this area which causes weak counter-currents in an otherwise strong geostrophic current area.

  1. [Genome-wide identification and expression analysis of the WRKY gene family in peach].

    PubMed

    Yanbing, Gu; Zhirui, Ji; Fumei, Chi; Zhuang, Qiao; Chengnan, Xu; Junxiang, Zhang; Zongshan, Zhou; Qinglong, Dong

    2016-03-01

    The WRKY transcription factors are one of the largest families of transcriptional regulators and play diverse regulatory roles in biotic and abiotic stresses, plant growth and development processes. In this study, the WRKY DNA-binding domain (Pfam Database number: PF03106) downloaded from Pfam protein families database was exploited to identify WRKY genes from the peach (Prunus persica 'Lovell') genome using HMMER 3.0. The obtained amino acid sequences were analyzed with DNAMAN 5.0, WebLogo 3, MEGA 5.1, MapInspect and MEME bioinformatics softwares. Totally 61 peach WRKY genes were found in the peach genome. Our phylogenetic analysis revealed that peach WRKY genes were classified into three Groups: Ⅰ, Ⅱ and Ⅲ. The WRKY N-terminal and C-terminal domains of Group Ⅰ (group I-N and group I-C) were monophyletic. The Group Ⅱ was sub-divided into five distinct clades (groupⅡ-a, Ⅱ-b, Ⅱ-c, Ⅱ-d and Ⅱ-e). Our domain analysis indicated that the WRKY regions contained a highly conserved heptapeptide stretch WRKYGQK at its N-terminus followed by a zinc-finger motif. The chromosome mapping analysis showed that peach WRKY genes were distributed with different densities over 8 chromosomes. The intron-exon structure analysis revealed that structures of the WRKY gene were highly conserved in the peach. The conserved motif analysis showed that the conserved motifs 1, 2 and 3, which specify the WRKY domain, were observed in all peach WRKY proteins, motif 5 as the unknown domain was observed in group Ⅱ-d, two WRKY domains were assigned to GroupⅠ. SqRT-PCR and qRT-PCR results indicated that 16 PpWRKY genes were expressed in roots, stems, leaves, flowers and fruits at various expression levels. Our analysis thus identified the PpWRKY gene families, and future functional studies are needed to reveal its specific roles.

  2. Transcriptome Analysis of Differentially Expressed Genes Relevant to Variegation in Peach Flowers

    PubMed Central

    Yu, Faxin; Li, Shuxian; Yin, Tongming

    2014-01-01

    Background Variegation in flower color is commonly observed in many plant species and also occurs on ornamental peaches (Prunus persica f. versicolor [Sieb.] Voss). Variegated plants are highly valuable in the floricultural market. To gain a global perspective on genes differentially expressed in variegated peach flowers, we performed large-scale transcriptome sequencing of white and red petals separately collected from a variegated peach tree. Results A total of 1,556,597 high-quality reads were obtained, with an average read length of 445 bp. The ESTs were assembled into 16,530 contigs and 42,050 singletons. The resulting unigenes covered about 60% of total predicted genes in the peach genome. These unigenes were further subjected to functional annotation and biochemical pathway analysis. Digital expression analysis identified a total of 514 genes differentially expressed between red and white flower petals. Since peach flower coloration is determined by the expression and regulation of structural genes relevant to flavonoid biosynthesis, a detailed examination detected four key structural genes, including C4H, CHS, CHI and F3H, expressed at a significantly higher level in red than in white petal. Except for the structural genes, we also detected 11 differentially expressed regulatory genes relating to flavonoid biosynthesis. Using the differentially expressed structural genes as the test objects, we validated the digital expression results by using quantitative real-time PCR, and the differential expression of C4H, CHS and F3H were confirmed. Conclusion In this study, we generated a large EST collection from flower petals of a variegated peach. By digital expression analysis, we identified an informative list of candidate genes associated with variegation in peach flowers, which offered a unique opportunity to uncover the genetic mechanisms underlying flower color variegation. PMID:24603808

  3. Transcriptome analysis of seed dormancy after rinsing and chilling in ornamental peaches (Prunus persica (L.) Batsch).

    PubMed

    Kanjana, Worarad; Suzuki, Tomohiro; Ishii, Kazuo; Kozaki, Toshinori; Iigo, Masayuki; Yamane, Kenji

    2016-08-08

    Ornamental peaches cv. 'Yaguchi' (Prunus persica (L.) Batsch) can be propagated via seeds. The establishment of efficient seed treatments for early germination and seedling growth is required to shorten nursery and breeding periods. It is important, therefore, to identify potential candidate genes responsible for the effects of rinsing and chilling on seed germination. We hypothesized that longer rinsing combined with chilling of seeds can alter the genes expression in related to dormancy and then raise the germination rate in the peach. To date, most molecular studies in peaches have involved structural genomics, and few transcriptome studies of seed germination have been conducted. In this study, we investigated the function of key seed dormancy-related genes using next-generation sequencing to profile the transcriptomes involved in seed dormancy in peaches. De novo assembly and analysis of the transcriptome identified differentially expressed and unique genes present in this fruit. De novo RNA-sequencing of peach was performed using the Illumina Miseq 2000 system. Paired-end sequence from mRNAs generated high quality sequence reads (9,049,964, 10,026,362 and 10,101,918 reads) from 'Yaguchi' peach seeds before rinsed (BR) and after rinsed for 2 or 7 days with a chilling period of 4 weeks (termed 2D4W and 7D4W), respectively. The germination rate of 7D4W was significantly higher than that of 2D4W. In total, we obtained 51,366 unique sequences. Differential expression analysis identified 7752, 8469 and 506 differentially expressed genes from BR vs 2D4W, BR vs 7D4W and 2D4W vs 7D4W libraries respectively, filtered based on p-value and an adjusted false discovery rate of less than 0.05. This study identified genes associated with the rinsing and chilling process that included those associated with phytohormones, the stress response and transcription factors. 7D4W treatment downregulated genes involved in ABA synthesis, catabolism and signaling pathways, which

  4. Identification and validation of potential conserved microRNAs and their targets in peach (Prunus persica).

    PubMed

    Gao, Zhihong; Luo, Xiaoyan; Shi, Ting; Cai, Bin; Zhang, Zhen; Cheng, Zongming; Zhuang, Weibing

    2012-09-01

    MicroRNAs are a class of small, endogenous, non-coding RNA molecules that negatively regulate gene expression at the transcriptional or the post-transcriptional level. Although a large number of miRNAs have been identified in many plant species, especially from model plants and crops, they remain largely unknown in peach. In this study, 110 potential miRNAs belonging to 37 families were identified using computational methods. A total of 43 potential targets were found for 21 families based on near-perfect or perfect complementarity between the plant miRNA and the target sequences. A majority of the targets were transcription factors which play important roles in peach development. qRT-PCR analysis of RNA samples prepared from different peach tissues for 25 miRNA families revealed that miRNAs were differentially expressed in different tissues. Furthermore, two target genes were experimentally verified by detection of the miRNA-mediated mRNA cleavage sites in peach using RNA ligase-mediated 5' rapid amplification of cDNA ends (RLM-RACE). Finally, we studied the expression pattern of the two target genes in three different tissues of peach to further understand the mechanism of the interaction between miRNAs and their target genes.

  5. A surprise at the bottom of the main sequence: Rapid rotation and NO H-alpha emission

    NASA Technical Reports Server (NTRS)

    Basri, Gibor; Marcy, Geoffrey W.

    1995-01-01

    We report Kech Observatory high-resolution echelle spectra from 640-850 nm for eight stars near the faint end of the main sequence. These spectra are the highest resolution spectra of such late-type stars, and clearly resolve the TiO, VO, and atomic lines. The sample includes the field brown-dwarf candidate, BRI 0021-0214 (M9.5+). Very unexpectedly, it shows the most rapid rotation in the entire samples, v sin i approximately 40 km/s, which is 20x faster than typical field nonemission M stars. Equally surprising is that BRI 0021 exhibits no emission or absorptionat H-alpha. We argue that this absence is not simply due to its cool photosphere, but that stellar activity declines in a fundamental way at the end of the main sequence. As it is the first very late M dwarf observed at high spectral resolution, BRI 0021 may be signaling a qualitative change in the angular momentum loss rate among the lowest mass stars. Conventionally, its rapid rotation would have marked BRI 0021 as very young, consistent with the selection effect which arises if the latest-type dwarfs are really brown dwarfs on cooling curves. In any case, it is unprecedented to find no sign of stellar activity in such a rapidly rotating convective star. We also discuss the possible conflict between this observation and the extremely strong H-alpha seen in another very cool star, PC 0025+0447. Extrapolation of M-L relations for BRI 0021 yields M approximately 0.065 solar mass, and the other sample objects have expected masses near the H-burning limit. These include two Pleiades brown-dwarf candidates, four field M6 dwarfs and one late-type T Tauri star. The two Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades membership. Similarly, the late-type T Tauri star has v sin i approximately 30 km/s and H alpha emission indicate of its

  6. A surprise at the bottom of the main sequence: Rapid rotation and NO H-alpha emission

    NASA Technical Reports Server (NTRS)

    Basri, Gibor; Marcy, Geoffrey W.

    1995-01-01

    We report Kech Observatory high-resolution echelle spectra from 640-850 nm for eight stars near the faint end of the main sequence. These spectra are the highest resolution spectra of such late-type stars, and clearly resolve the TiO, VO, and atomic lines. The sample includes the field brown-dwarf candidate, BRI 0021-0214 (M9.5+). Very unexpectedly, it shows the most rapid rotation in the entire samples, v sin i approximately 40 km/s, which is 20x faster than typical field nonemission M stars. Equally surprising is that BRI 0021 exhibits no emission or absorptionat H-alpha. We argue that this absence is not simply due to its cool photosphere, but that stellar activity declines in a fundamental way at the end of the main sequence. As it is the first very late M dwarf observed at high spectral resolution, BRI 0021 may be signaling a qualitative change in the angular momentum loss rate among the lowest mass stars. Conventionally, its rapid rotation would have marked BRI 0021 as very young, consistent with the selection effect which arises if the latest-type dwarfs are really brown dwarfs on cooling curves. In any case, it is unprecedented to find no sign of stellar activity in such a rapidly rotating convective star. We also discuss the possible conflict between this observation and the extremely strong H-alpha seen in another very cool star, PC 0025+0447. Extrapolation of M-L relations for BRI 0021 yields M approximately 0.065 solar mass, and the other sample objects have expected masses near the H-burning limit. These include two Pleiades brown-dwarf candidates, four field M6 dwarfs and one late-type T Tauri star. The two Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades M6 dwarfs have v sin i of 26 and 37 km/s, H-alpha in emission, and radial velocities consistent with Pleiades membership. Similarly, the late-type T Tauri star has v sin i approximately 30 km/s and H alpha emission indicate of its

  7. Development and Evaluation of a 9K SNP Array for Peach by Internationally Coordinated SNP Detection and Validation in Breeding Germplasm

    PubMed Central

    Scalabrin, Simone; Gilmore, Barbara; Lawley, Cynthia T.; Gasic, Ksenija; Micheletti, Diego; Rosyara, Umesh R.; Cattonaro, Federica; Vendramin, Elisa; Main, Dorrie; Aramini, Valeria; Blas, Andrea L.; Mockler, Todd C.; Bryant, Douglas W.; Wilhelm, Larry; Troggio, Michela; Sosinski, Bryon; Aranzana, Maria José; Arús, Pere; Iezzoni, Amy; Morgante, Michele; Peace, Cameron

    2012-01-01

    Although a large number of single nucleotide polymorphism (SNP) markers covering the entire genome are needed to enable molecular breeding efforts such as genome wide association studies, fine mapping, genomic selection and marker-assisted selection in peach [Prunus persica (L.) Batsch] and related Prunus species, only a limited number of genetic markers, including simple sequence repeats (SSRs), have been available to date. To address this need, an international consortium (The International Peach SNP Consortium; IPSC) has pursued a coordinated effort to perform genome-scale SNP discovery in peach using next generation sequencing platforms to develop and characterize a high-throughput Illumina Infinium® SNP genotyping array platform. We performed whole genome re-sequencing of 56 peach breeding accessions using the Illumina and Roche/454 sequencing technologies. Polymorphism detection algorithms identified a total of 1,022,354 SNPs. Validation with the Illumina GoldenGate® assay was performed on a subset of the predicted SNPs, verifying ∼75% of genic (exonic and intronic) SNPs, whereas only about a third of intergenic SNPs were verified. Conservative filtering was applied to arrive at a set of 8,144 SNPs that were included on the IPSC peach SNP array v1, distributed over all eight peach chromosomes with an average spacing of 26.7 kb between SNPs. Use of this platform to screen a total of 709 accessions of peach in two separate evaluation panels identified a total of 6,869 (84.3%) polymorphic SNPs. The almost 7,000 SNPs verified as polymorphic through extensive empirical evaluation represent an excellent source of markers for future studies in genetic relatedness, genetic mapping, and dissecting the genetic architecture of complex agricultural traits. The IPSC peach SNP array v1 is commercially available and we expect that it will be used worldwide for genetic studies in peach and related stone fruit and nut species. PMID:22536421

  8. CBF gene expression in peach leaf and bark tissues is gated by a circadian clock.

    PubMed

    Artlip, Timothy S; Wisniewski, Michael E; Bassett, Carole L; Norelli, John L

    2013-08-01

    low temperature or dehydration corresponded with regulatory motifs present in their promoter sequences. Low temperature and dehydration induction data for three peach dehydrin genes indicated that the regulation of these genes in peach is complex, with individual dehydrin gene expression being correlated with the expression of one or more CBF genes.

  9. Three distinct mutational mechanisms acting on a single gene underpin the origin of yellow flesh in peach

    PubMed Central

    Falchi, Rachele; Vendramin, Elisa; Zanon, Laura; Scalabrin, Simone; Cipriani, Guido; Verde, Ignazio; Vizzotto, Giannina; Morgante, Michele

    2013-01-01

    Peach flesh color (white or yellow) is among the most popular commercial criteria for peach classification, and has implications for consumer acceptance and fruit nutritional quality. Despite the increasing interest in improving cultivars of both flesh types, little is known about the genetic basis for the carotenoid content diversity in peach. Here we describe the association between genotypes at a locus encoding the carotenoid cleavage dioxygenase 4 (PpCCD4), localized in pseudomolecule 1 of the Prunus persica reference genome sequence, and the flesh color for 37 peach varieties, including two somatic revertants, and three ancestral relatives of peach, providing definitive evidence that this locus is responsible for flesh color phenotype. We show that yellow peach alleles have arisen from various ancestral haplotypes by at least three independent mutational events involving nucleotide substitutions, small insertions and transposable element insertions, and that these mutations, despite being located within the transcribed portion of the gene, also result in marked differences in transcript levels, presumably as a consequence of differential transcript stability involving nonsense-mediated mRNA decay. The PpCCD4 gene provides a unique example of a gene for which humans, in their quest to diversify phenotypic appearance and qualitative characteristics of a fruit, have been able to select and exploit multiple mutations resulting from a variety of mechanisms. PMID:23855972

  10. Peaches Preceded Humans: Fossil Evidence from SW China

    PubMed Central

    Su, Tao; Wilf, Peter; Huang, Yongjiang; Zhang, Shitao; Zhou, Zhekun

    2015-01-01

    Peach (Prunus persica, Rosaceae) is an extremely popular tree fruit worldwide, with an annual production near 20 million tons. Peach is widely thought to have origins in China, but its evolutionary history is largely unknown. The oldest evidence for the peach has been Chinese archaeological records dating to 8000–7000 BP. Here, we report eight fossil peach endocarps from late Pliocene strata of Kunming City, Yunnan, southwestern China. The fossils are identical to modern peach endocarps, including size comparable to smaller modern varieties, a single seed, a deep dorsal groove, and presence of deep pits and furrows. These fossils show that China has been a critical region for peach evolution since long before human presence, much less agriculture. Peaches evolved their modern morphology under natural selection, presumably involving large, frugivorous mammals such as primates. Much later, peach size and variety increased through domestication and breeding. PMID:26610240

  11. Peaches Preceded Humans: Fossil Evidence from SW China.

    PubMed

    Su, Tao; Wilf, Peter; Huang, Yongjiang; Zhang, Shitao; Zhou, Zhekun

    2015-11-26

    Peach (Prunus persica, Rosaceae) is an extremely popular tree fruit worldwide, with an annual production near 20 million tons. Peach is widely thought to have origins in China, but its evolutionary history is largely unknown. The oldest evidence for the peach has been Chinese archaeological records dating to 8000-7000 BP. Here, we report eight fossil peach endocarps from late Pliocene strata of Kunming City, Yunnan, southwestern China. The fossils are identical to modern peach endocarps, including size comparable to smaller modern varieties, a single seed, a deep dorsal groove, and presence of deep pits and furrows. These fossils show that China has been a critical region for peach evolution since long before human presence, much less agriculture. Peaches evolved their modern morphology under natural selection, presumably involving large, frugivorous mammals such as primates. Much later, peach size and variety increased through domestication and breeding.

  12. Evaluation of six common peach rootstocks to Meloidogyne mayaguensis

    USDA-ARS?s Scientific Manuscript database

    Flordaguard, Guardian, Halford, Lovell, Nemaguard, and Okinawa peach rootstocks were evaluated for their susceptibility to Meloidogyne mayaguensis in two separate experiments. All rootstocks were rated as poor hosts of M. mayaguensis. Evaluating different peach rootstocks for resistance to M. ma...

  13. Peaches Preceded Humans: Fossil Evidence from SW China

    NASA Astrophysics Data System (ADS)

    Su, Tao; Wilf, Peter; Huang, Yongjiang; Zhang, Shitao; Zhou, Zhekun

    2015-11-01

    Peach (Prunus persica, Rosaceae) is an extremely popular tree fruit worldwide, with an annual production near 20 million tons. Peach is widely thought to have origins in China, but its evolutionary history is largely unknown. The oldest evidence for the peach has been Chinese archaeological records dating to 8000-7000 BP. Here, we report eight fossil peach endocarps from late Pliocene strata of Kunming City, Yunnan, southwestern China. The fossils are identical to modern peach endocarps, including size comparable to smaller modern varieties, a single seed, a deep dorsal groove, and presence of deep pits and furrows. These fossils show that China has been a critical region for peach evolution since long before human presence, much less agriculture. Peaches evolved their modern morphology under natural selection, presumably involving large, frugivorous mammals such as primates. Much later, peach size and variety increased through domestication and breeding.

  14. Progress in developing Armillaria resistant rootstocks for use with peach

    USDA-ARS?s Scientific Manuscript database

    GuardianTM (BY520-9) peach seedling rootstock was released in 1993 to provide a rootstock with superior resistance to peach tree short life (PTSL) which at the time was the number one cause of premature death of peach (Prunus persica L. [Batsch]) trees in the southeastern US. Since that time Guardi...

  15. Comparative expression and transcript initiation of three peach dehydrin genes.

    PubMed

    Bassett, Carole Leavel; Wisniewski, Michael E; Artlip, Timothy S; Richart, Greg; Norelli, John L; Farrell, Robert E

    2009-06-01

    Dehydrin genes encode proteins with demonstrated cryoprotective and antifreeze activity, and they respond to a variety of abiotic stress conditions that have dehydration as a common component. Two dehydrins from peach (Prunus persica L. [Batsch.]) have been previously characterized; here, we describe the characterization of a third dehydrin from peach bark, PpDhn3, isolated by its response to low temperature. The expression of all three dehydrin genes was profiled by semi-quantitative reverse transcription PCR, and transcript initiation was mapped for all three genes using the RNA ligase-mediated 5' rapid amplification of cDNA ends technique. PpDhn3 transcripts from bark collected in December or July, as well as transcripts from developing fruit, initiated at a single site. Although most of the PpDhn1 transcripts initiated at a similar position, those from young fruit initiated much further upstream of the consensus TATA box. Bark and fruit transcripts encoding PpDhn2 initiated ca. 30 bases downstream of a consensus TATA box; however, transcripts from ripe fruit initiated further upstream. Ripe fruit transcripts of PpDhn2 contain a 5' leader intron which is predicted to add some 34 amino acids to the N-terminal methionine of the cognate protein when properly processed. Secondary structure prediction of sequences surrounding the TATA box suggests that conformational transitions associated with decreasing temperature contribute to the regulation of expression of the cold-responsive dehydrin genes. Taken together these results reveal new, unexpected levels of gene regulation contributing to the overall expression pattern of peach dehydrins.

  16. Application of genomic and quantitative genetic tools to identify candidate resistance genes for brown rot resistance in peach.

    PubMed

    Martínez-García, Pedro J; Parfitt, Dan E; Bostock, Richard M; Fresnedo-Ramírez, Jonathan; Vazquez-Lobo, Alejandra; Ogundiwin, Ebenezer A; Gradziel, Thomas M; Crisosto, Carlos H

    2013-01-01

    The availability of a complete peach genome assembly and three different peach genome sequences created by our group provide new opportunities for application of genomic data and can improve the power of the classical Quantitative Trait Loci (QTL) approaches to identify candidate genes for peach disease resistance. Brown rot caused by Monilinia spp., is the most important fungal disease of stone fruits worldwide. Improved levels of peach fruit rot resistance have been identified in some cultivars and advanced selections developed in the UC Davis and USDA breeding programs. Whole genome sequencing of the Pop-DF parents lead to discovery of high-quality SNP markers for QTL genome scanning in this experimental population. Pop-DF created by crossing a brown rot moderately resistant cultivar 'Dr. Davis' and a brown rot resistant introgression line, 'F8,1-42', derived from an initial almond × peach interspecific hybrid, was evaluated for brown rot resistance in fruit of harvest maturity over three seasons. Using the SNP linkage map of Pop-DF and phenotypic data collected with inoculated fruit, a genome scan for QTL identified several SNP markers associated with brown rot resistance. Two of these QTLs were placed on linkage group 1, covering a large (physical) region on chromosome 1. The genome scan for QTL and SNP effects predicted several candidate genes associated with disease resistance responses in other host-pathogen systems. Two potential candidate genes, ppa011763m and ppa026453m, may be the genes primarily responsible for M. fructicola recognition in peach, activating both PAMP-triggered immunity (PTI) and effector-triggered immunity (ETI) responses. Our results provide a foundation for further genetic dissection, marker assisted breeding for brown rot resistance, and development of peach cultivars resistant to brown rot.

  17. Progress in the management of peach fungal gummosis (Botryosphaeria dothidea) in the Southeastern U.S. peach industry

    USDA-ARS?s Scientific Manuscript database

    Peach fungal gummosis, incited by Botryosphaeria dothidea (Moug.:Fr.) Ces. & De Not., has been shown to be capable of reducing growth and yield by up to 40% on susceptible peach [Prunus persica (L.) Batsch] cultivars. Initial field screens demonstrated that several important peach cultivars utilize...

  18. Molecular cloning and expression analysis of an arginine decarboxylase gene from peach (Prunus persica).

    PubMed

    Liu, Ji Hong; Ban, Yusuke; Wen, Xiao-Peng; Nakajima, Ikuko; Moriguchi, Takaya

    2009-01-15

    Arginine decarboxylase (ADC), one of the enzymes responsible for putrescine (Put) biosynthesis, has been shown to be implicated in stress response. In the current paper attempts were made to clone and characterize a gene encoding ADC from peach (Prunus persica (L.) Batsch, 'Akatsuki'). Rapid amplification of cDNA ends (RACE) gave rise to a full-length ADC cDNA (PpADC) with a complete open reading frame of 2178 bp, encoding a 725 amino acid polypeptide. Homology search and sequence multi-alignment demonstrated that the deduced PpADC protein sequence shared a high identity with ADCs from other plants, including several highly conservative motifs and amino acids. Southern blotting indicated that PpADC existed in peach genome as a single gene. Expression levels of PpADC in different tissues of peach (P. persica 'Akatsuki') were spatially and developmentally regulated. Treatment of peach shoots from 'Mochizuki' with exogenous 5 mM Put, an indirect product of ADC, remarkably induced accumulation of PpADC mRNA. Transcripts of PpADC in peach leaves from 'Mochizuki' were quickly induced, either transiently or continuously, in response to dehydration, high salinity (200 mM NaCl), low temperature (4 degrees C) and heavy metal (150 microM CdCl(2)), but repressed by high temperature 37 degrees C) during a 2-day treatment, which changed in an opposite direction when the stresses were otherwise removed with the exception of CdCl(2) treatment. In addition, steady-state of PpADC mRNA could be also transiently up-regulated by abscisic acid (ABA) in 'Mochizuki' leaves. All of these, taken together, suggest that PpADC is a stress-responsive gene and can be considered as a potential target that is genetically manipulated so as to create novel germplasms with enhanced stress tolerance in the future.

  19. Transcriptional regulatory networks controlling woolliness in peach in response to preharvest gibberellin application and cold storage.

    PubMed

    Pegoraro, Camila; Tadiello, Alice; Girardi, César L; Chaves, Fábio C; Quecini, Vera; de Oliveira, Antonio Costa; Trainotti, Livio; Rombaldi, Cesar Valmor

    2015-11-18

    Postharvest fruit conservation relies on low temperatures and manipulations of hormone metabolism to maintain sensory properties. Peaches are susceptible to chilling injuries, such as 'woolliness' that is caused by juice loss leading to a 'wooly' fruit texture. Application of gibberellic acid at the initial stages of pit hardening impairs woolliness incidence, however the mechanisms controlling the response remain unknown. We have employed genome wide transcriptional profiling to investigate the effects of gibberellic acid application and cold storage on harvested peaches. Approximately half of the investigated genes exhibited significant differential expression in response to the treatments. Cellular and developmental process gene ontologies were overrepresented among the differentially regulated genes, whereas sequences in cell death and immune response categories were underrepresented. Gene set enrichment demonstrated a predominant role of cold storage in repressing the transcription of genes associated to cell wall metabolism. In contrast, genes involved in hormone responses exhibited a more complex transcriptional response, indicating an extensive network of crosstalk between hormone signaling and low temperatures. Time course transcriptional analyses demonstrate the large contribution of gene expression regulation on the biochemical changes leading to woolliness in peach. Overall, our results provide insights on the mechanisms controlling the complex phenotypes associated to postharvest textural changes in peach and suggest that hormone mediated reprogramming previous to pit hardening affects the onset of chilling injuries.

  20. Bottom production

    SciTech Connect

    Baines, J.; Baranov, S.P.; Bartalini, P.; Bay, A.; Bouhova, E.; Cacciari, M.; Caner, A.; Coadou, Y.; Corti, G.; Damet, J.; Dell-Orso, R.; De Mello Neto, J.R.T.; Domenech, J.L.; Drollinger, V.; Eerola, P.; Ellis, N.; Epp, B.; Frixione, S.; Gadomski, S.; Gavrilenko, I.; Gennai, S.; George, S.; Ghete, V.M.; Guy, L.; Hasegawa, Y.; Iengo, P.; Jacholkowska, A.; Jones, R.; Kharchilava, A.; Kneringer, E.; Koppenburg, P.; Korsmo, H.; Kramer, M.; Labanca, N.; Lehto, M.; Maltoni, F.; Mangano, M.L.; Mele, S.; Nairz, A.M.; Nakada, T.; Nikitin, N.; Nisati, A.; Norrbin, E.; Palla, F.; Rizatdinova, F.; Robins, S.; Rousseau, D.; Sanchis-Lozano, M.A.; Shapiro, M.; Sherwood, P.; Smirnova, L.; Smizanska, M.; Starodumov, A.; Stepanov, N.; Vogt, R.

    2000-03-15

    In the context of the LHC experiments, the physics of bottom flavoured hadrons enters in different contexts. It can be used for QCD tests, it affects the possibilities of B decays studies, and it is an important source of background for several processes of interest. The physics of b production at hadron colliders has a rather long story, dating back to its first observation in the UA1 experiment. Subsequently, b production has been studied at the Tevatron. Besides the transverse momentum spectrum of a single b, it has also become possible, in recent time, to study correlations in the production characteristics of the b and the b. At the LHC new opportunities will be offered by the high statistics and the high energy reach. One expects to be able to study the transverse momentum spectrum at higher transverse momenta, and also to exploit the large statistics to perform more accurate studies of correlations.

  1. Version VI of the ESTree db: an improved tool for peach transcriptome analysis

    PubMed Central

    Lazzari, Barbara; Caprera, Andrea; Vecchietti, Alberto; Merelli, Ivan; Barale, Francesca; Milanesi, Luciano; Stella, Alessandra; Pozzi, Carlo

    2008-01-01

    Background The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 19 peach libraries. Nine peach genotypes and four peach tissues are represented, from four fruit developmental stages. The aim of this work was to implement the already existing ESTree db by adding new sequences and analysis programs. Particular care was given to the implementation of the web interface, that allows querying each of the database features. Results A Perl modular pipeline is the backbone of sequence analysis in the ESTree db project. Outputs obtained during the pipeline steps are automatically arrayed into the fields of a MySQL database. Apart from standard clustering and annotation analyses, version VI of the ESTree db encompasses new tools for tandem repeat identification, annotation against genomic Rosaceae sequences, and positioning on the database of oligomer sequences that were used in a peach microarray study. Furthermore, known protein patterns and motifs were identified by comparison to PROSITE. Based on data retrieved from sequence annotation against the UniProtKB database, a script was prepared to track positions of homologous hits on the GO tree and build statistics on the ontologies distribution in GO functional categories. EST mapping data were also integrated in the database. The PHP-based web interface was upgraded and extended. The aim of the authors was to enable querying the database according to all the biological aspects that can be investigated from the analysis of data available in the ESTree db. This is achieved by allowing multiple searches on logical subsets of sequences that represent different biological situations or features. Conclusions The version VI of ESTree db offers a broad overview on peach gene expression. Sequence analyses results contained in the database, extensively linked to external related resources, represent a large amount of

  2. Evolutionary genomics of peach and almond domestication

    USDA-ARS?s Scientific Manuscript database

    The domesticated almond [Prunus dulcis (L.) Batsch] and peach [P. persica (Mill.) D. A. Webb] originate on opposite sides of Asia and were independently domesticated approximately 5000 years ago. While interfertile, they possess alternate mating systems and di er in a number of morphological and ph...

  3. Sugars in peach fruit: a breeding perspective

    PubMed Central

    Cirilli, Marco; Bassi, Daniele; Ciacciulli, Angelo

    2016-01-01

    The last decade has been characterized by a decrease in peach (Prunus persica) fruit consumption in many countries, foremost due to unsatisfactory quality. The sugar content is one of the most important quality traits perceived by consumers, and the development of novel peach cultivars with sugar-enhanced content is a primary objective of breeding programs to revert the market inertia. Nevertheless, the progress reachable through classical phenotypic selection is limited by the narrow genetic bases of peach breeding material and by the complex quantitative nature of the trait, which is deeply affected by environmental conditions and agronomical management. The development of molecular markers applicable in MAS or MAB has become an essential strategy to boost the selection efficiency. Despite the enormous advances in ‘omics’ sciences, providing powerful tools for plant genotyping, the identification of the genetic bases of sugar-related traits is hindered by the lack of adequate phenotyping methods that are able to address strong within-plant variability. This review provides an overview of the current knowledge of the metabolic pathways and physiological mechanisms regulating sugar accumulation in peach fruit, the main advances in phenotyping approaches and genetic background, and finally addressing new research priorities and prospective for breeders. PMID:26816618

  4. 'Sharpe', a clonal plum rootstock for peach

    USDA-ARS?s Scientific Manuscript database

    Sharpe clonal rootstock for peach is jointly released for grower trial by the U.S. Department of Agriculture, Agricultural Research Service (Byron, GA), and Florida Agricultural Experiment Station. Sharpe, previously tested as FLA1-1, was discovered in the wild and appears to be a hybrid of Chickas...

  5. Consumer peach preferences and purchasing behavior: a mixed methods study.

    PubMed

    Kelley, Kathleen M; Primrose, Rachel; Crassweller, Robert; Hayes, John E; Marini, Richard

    2016-05-01

    Peaches (Prunus persica (L.) Stokes) are grown in several regions throughout the USA, are eaten fresh, and used as ingredients in value-added processed products. An Internet survey was conducted to investigate Mid-Atlantic consumers' fresh and processed peach purchasing behaviors, and whether packaging certain numbers of peaches together, providing information about nutritional content, and other factors would increase purchases. Additionally, laboratory-based sensory testing was used to better understand peel color, texture, sweetness, sourness, and flavor preferences for cultivars commonly grown in the Mid-Atlantic region. Irrespective of fresh peach consumption frequency, certain value-added products were of interest. For some products, interest in purchasing was higher than reported purchasing behavior. Preference for certain fresh peach characteristics, such as peel color, differed between less frequent fresh peach consumers and those who consumed fresh peaches more often. Of the four peach cultivars included in the sensory test, most were liked; however, there were some cultivar differences pertaining to color, texture, sweetness, tartness, and flavor liking. Potential marketing strategies can be developed based on frequency of fresh peach consumption and household demographics. Data can be used to select peaches that best appeal to consumers. © 2015 Society of Chemical Industry. © 2015 Society of Chemical Industry.

  6. A one-step multiplex RT-PCR assay for simultaneous detection of four viruses that infect peach.

    PubMed

    Yu, Y; Zhao, Z; Jiang, D; Wu, Z; Li, S

    2013-10-01

    A multiplex reverse transcription polymerase chain reaction (mRT-PCR) assay was developed to enable the simultaneous detection and differentiation of four viruses that infect peach, namely Apple chlorotic leaf spot virus (ACLSV), Cherry green ring mottle virus (CGRMV), Prunus necrotic ringspot virus (PNRSV) and Apricot pseudo-chlorotic leaf spot virus (APCLSV). In this study, four pairs of primers, one specific for each virus, were designed; the corresponding PCR products were 632, 439, 346 and 282 bp in length for ACLSV, CGRMV, PNRSV and APCLSV, respectively, and the fragments could be distinguished clearly by agarose gel electrophoresis. The sensitivity and specificity of the method were tested using individual RT-PCR and enzyme-linked immunosorbent assay (ELISA), and the identity of the RT-PCR amplification products was also confirmed by DNA sequencing. The results of RT-PCR and ELISA, along with batch detection using samples collected from peach orchards, revealed that this rapid and simple technique is an effective way to identify the four viruses simultaneously. The mRT-PCR assay described in this study was developed for the simultaneous detection of four peach viruses from infected peach samples is reliable and sensitive. In contrast to conventional uniplex RT-PCR, mRT-PCR is more efficient, reducing costs, time and handling when testing large numbers of samples. This rapid and simple method is useful for large-scale surveys of viruses that infect peach. © 2013 The Society for Applied Microbiology.

  7. Fennel allergy is a lipid-transfer protein (LTP)-related food hypersensitivity associated with peach allergy.

    PubMed

    Pastorello, Elide A; Farioli, Laura; Stafylaraki, Chrysi; Scibilia, Joseph; Giuffrida, Maria G; Mascheri, Ambra; Piantanida, Marta; Baro, Cristina; Primavesi, Laura; Nichelatti, Michele; Schroeder, Jan W; Pravettoni, Valerio

    2013-01-23

    Fennel allergy has been rarely reported, and the association with peach allergy has never been described. Our aim was to (i) study the correlation between symptom severity of peach and fennel and (ii) identify fennel allergens and the role of rPru p 3 antibodies in severe reactions to fennel. In 148 patients with peach allergy, we investigated 58 patients with symptoms and IgE antibodies positive to fennel. IgE to rPru p 1, 3, and 4 and rBet v 1, 2, and 4 were measured by immunoblotting, and the N-terminal amino acid sequences and relevant allergens were determined. We found significant association between severe reactions to fennel and peach (p = 0.0009). A major allergen was ~9 kDa lipid-transfer protein (LTP), cross-reactive with Pru p 3, a 15 kDa protein identified as a pathogenesis-related protein 1 of the Bet v 1 family. In conclusion, peach and fennel severe allergic symptoms are significantly related, and LTP is a major fennel allergen. Fennel should be included in the LTP syndrome.

  8. Genomic detection and characterization of a Korean isolate of Little cherry virus 1 sampled from a peach tree.

    PubMed

    Lim, Seungmo; Igori, Davaajargal; Yoo, Ran Hee; Zhao, Fumei; Cho, In-Sook; Choi, Gug-Seoun; Lim, Hyoun-Sub; Lee, Su-Heon; Moon, Jae Sun

    2015-10-01

    A peach tree (Prunus persica) showing yellowing and mild mottle symptoms was analyzed using high-throughput RNA sequencing to determine the causal agent. A total of nine contigs similar to Little cherry virus 1 (LChV-1) were produced, and all the contigs showed nucleotide sequence identity (lower than 83 %) and query coverage (higher than 73 %) with LChV-1. The symptomatic peach sample was confirmed to be infected with LChV-1-like virus as a result of reverse transcription-polymerase chain reaction using primers designed based on sequences of the contigs. Occurrence of diseases caused by LChV-1 in Prunus species has been reported. Complete 16,931-nt genome of the peach virus composed of eight open reading frames was determined, and conserved domains including viral methyltransferase, viral helicase 1, RNA-dependent RNA polymerase (RdRp), heat shock protein 70 homologue (HSP70h), HSP90h and closterovirus coat protein (CP) were identified. Phylogenetic trees based on amino acid sequence alignments between the peach virus and members in the family Closteroviridae showed that the virus was most similar to LChV-1. Pairwise comparisons based on amino acid sequence alignments of three genes (RdRp, HSP70h and CP) between the peach virus and LChV-1 isolates showed the highest amino acid sequence identities, with 84.32 % for RdRp, 85.48 % for HSP70h and 80.45 % for CP. These results indicate that this is the first report for the presence of LChV-1 in South Korea and may be one of the first reports of natural infection of peach by LChV-1. Although it is not clear if LChV-1 YD isolate was responsible for specific symptoms observed, detection and characterization of the peach tree-infecting LChV-1 in South Korea would be useful in terms of the epidemiology of LChV-1.

  9. Regulation of anthocyanin biosynthesis in peach fruits.

    PubMed

    Rahim, Md Abdur; Busatto, Nicola; Trainotti, Livio

    2014-11-01

    MYB10.1 and MYB10.3, with bHLH3, are the likely regulators of anthocyanin biosynthesis in peach fruit. MYB10.1/2/3 forms a cluster on the same genomic fragment where the Anther color ( Ag ) trait is located. Anthocyanins are bioactive compounds responsible for the pigmentation of many plant parts such as leaves, flowers, fruits and roots, and have potential benefits to human health. In peach [Prunus persica (L.) Batsch], peel color is a key determinant for fruit quality and is regulated by flavonoids including anthocyanins. The R2R3 MYB transcription factors (TFs) control the expression of anthocyanin biosynthetic genes with the help of co-activators belonging to the basic-helix-loop-helix (bHLH) and WD40 repeat families. In the peach genome six MYB10-like and three bHLH-like TFs were identified as candidates to be the regulators of the anthocyanin accumulation, which, in yellow flesh fruits, is highest in the peel, abundant in the part of the mesocarp surrounding the stone and lowest in the mesocarp. The expression of MYB10.1 and MYB10.3 correlates with anthocyanin levels of different peach parts. They also have positive correlation with the expression of key structural genes of the anthocyanin pathway, such as CHS, F3H, and UFGT. Functions of peach MYB10s were tested in tobacco and shown to activate key genes in the anthocyanin pathway when bHLHs were co-expressed as partners. Overexpression of MYB10.1/bHLH3 and MYB10.3/bHLH3 activated anthocyanin production by up-regulating NtCHS, NtDFR and NtUFGT while other combinations were not, or much less, effective. As three MYB10 genes are localized in a genomic region where the Ag trait, responsible for anther pigmentation, is localized, it is proposed they are key determinant to introduce new peach cultivars with higher antioxidant level and pigmented fruit.

  10. Evolutionary Genomics of Peach and Almond Domestication.

    PubMed

    Velasco, Dianne; Hough, Josh; Aradhya, Mallikarjuna; Ross-Ibarra, Jeffrey

    2016-12-07

    The domesticated almond [Prunus dulcis (L.) Batsch] and peach [P. persica (Mill.) D. A. Webb] originated on opposite sides of Asia and were independently domesticated ∼5000 yr ago. While interfertile, they possess alternate mating systems and differ in a number of morphological and physiological traits. Here, we evaluated patterns of genome-wide diversity in both almond and peach to better understand the impacts of mating system, adaptation, and domestication on the evolution of these taxa. Almond has around seven times the genetic diversity of peach, and high genome-wide [Formula: see text] values support their status as separate species. We estimated a divergence time of ∼8 MYA (million years ago), coinciding with an active period of uplift in the northeast Tibetan Plateau and subsequent Asian climate change. We see no evidence of a bottleneck during domestication of either species, but identify a number of regions showing signatures of selection during domestication and a significant overlap in candidate regions between peach and almond. While we expected gene expression in fruit to overlap with candidate selected regions, instead we find enrichment for loci highly differentiated between the species, consistent with recent fossil evidence suggesting fruit divergence long preceded domestication. Taken together, this study tells us how closely related tree species evolve and are domesticated, the impact of these events on their genomes, and the utility of genomic information for long-lived species. Further exploration of this data will contribute to the genetic knowledge of these species and provide information regarding targets of selection for breeding application, and further the understanding of evolution in these species. Copyright © 2016 Velasco et al.

  11. Evolutionary Genomics of Peach and Almond Domestication

    PubMed Central

    Velasco, Dianne; Hough, Josh; Aradhya, Mallikarjuna; Ross-Ibarra, Jeffrey

    2016-01-01

    The domesticated almond [Prunus dulcis (L.) Batsch] and peach [P. persica (Mill.) D. A. Webb] originated on opposite sides of Asia and were independently domesticated ∼5000 yr ago. While interfertile, they possess alternate mating systems and differ in a number of morphological and physiological traits. Here, we evaluated patterns of genome-wide diversity in both almond and peach to better understand the impacts of mating system, adaptation, and domestication on the evolution of these taxa. Almond has around seven times the genetic diversity of peach, and high genome-wide FST values support their status as separate species. We estimated a divergence time of ∼8 MYA (million years ago), coinciding with an active period of uplift in the northeast Tibetan Plateau and subsequent Asian climate change. We see no evidence of a bottleneck during domestication of either species, but identify a number of regions showing signatures of selection during domestication and a significant overlap in candidate regions between peach and almond. While we expected gene expression in fruit to overlap with candidate selected regions, instead we find enrichment for loci highly differentiated between the species, consistent with recent fossil evidence suggesting fruit divergence long preceded domestication. Taken together, this study tells us how closely related tree species evolve and are domesticated, the impact of these events on their genomes, and the utility of genomic information for long-lived species. Further exploration of this data will contribute to the genetic knowledge of these species and provide information regarding targets of selection for breeding application, and further the understanding of evolution in these species. PMID:27707802

  12. The peach volatilome modularity is reflected at the genetic and environmental response levels in a QTL mapping population

    PubMed Central

    2014-01-01

    Background The improvement of fruit aroma is currently one of the most sought-after objectives in peach breeding programs. To better characterize and assess the genetic potential for increasing aroma quality by breeding, a quantity trait locus (QTL) analysis approach was carried out in an F1 population segregating largely for fruit traits. Results Linkage maps were constructed using the IPSC peach 9 K Infinium ® II array, rendering dense genetic maps, except in the case of certain chromosomes, probably due to identity-by-descent of those chromosomes in the parental genotypes. The variability in compounds associated with aroma was analyzed by a metabolomic approach based on GC-MS to profile 81 volatiles across the population from two locations. Quality-related traits were also studied to assess possible pleiotropic effects. Correlation-based analysis of the volatile dataset revealed that the peach volatilome is organized into modules formed by compounds from the same biosynthetic origin or which share similar chemical structures. QTL mapping showed clustering of volatile QTL included in the same volatile modules, indicating that some are subjected to joint genetic control. The monoterpene module is controlled by a unique locus at the top of LG4, a locus previously shown to affect the levels of two terpenoid compounds. At the bottom of LG4, a locus controlling several volatiles but also melting/non-melting and maturity-related traits was found, suggesting putative pleiotropic effects. In addition, two novel loci controlling lactones and esters in linkage groups 5 and 6 were discovered. Conclusions The results presented here give light on the mode of inheritance of the peach volatilome confirming previously loci controlling the aroma of peach but also identifying novel ones. PMID:24885290

  13. Identification and differential expression dynamics of peach small GTPases encoding genes during fruit development and ripening

    PubMed Central

    Falchi, Rachele; Cipriani, Guido; Marrazzo, Teresa; Nonis, Alberto; Vizzotto, Giannina; Ruperti, Benedetto

    2010-01-01

    The function of monomeric GTPases of the RAS superfamily in fruit development and ripening has been partially characterized. Here the identification of peach (Prunus persica) small GTPases of the RAS superfamily expressed in fruit and the characterization of their expression profiles during fruit development are described. Extensive searches on expressed sequence tag (EST) databases led to the selection of a total of 24 genes from peach encoding proteins with significant similarity to Arabidopsis small GTPases. Sequence similarity analyses and identification of conserved motifs, diagnostic of specific RAS families and subfamilies, enabled bona fide assignment of fourteen PpRAB, seven PpARF/ARL/SAR, two PpROP and one PpRAN GTPases. Transcriptional expression profiles of peach monomeric GTPases, analysed by real-time quantitative reverse transcription-PCR, were obtained for mesocarp samples, collected in two consecutive years. Reproducible patterns of expression could be identified for five peach RAB-encoding genes (PpRABA1-1, PpRABA2, PpRABD2-1, PpRABD2-2, and PpRABC2), two ARFs (PpARFA1-1 and PpARLB1), and two ROPs (PpROP3 and PpROP4). Interestingly, the transient transcriptional up-regulation of PpARF genes and of PpRAB genes of the A and D clades, putatively controlling the exocytic delivery of cell wall components and modifying enzymes, appeared to coincide with peaks of growth speed and sugar accumulation and with the final phases of ripening. To our knowledge, this is the first description of the co-ordinated differential expression of a set of genes encoding small GTPases of the ARF and RAB families which takes place during key moments of fruit development and maturation. PMID:20501747

  14. Bottom Reflection Coefficient.

    DTIC Science & Technology

    SONAR SIGNALS, *UNDERWATER SOUND SIGNALS, SOUND TRANSMISSION, ACOUSTIC ATTENUATION, REVERBERATION, TRANSMISSION LOSS, ACOUSTIC REFLECTION, SOUND RANGING, BOTTOM LOSS, DEEP SCATTERING LAYERS, BOTTOM BOUNCE .

  15. Peach rootstock development for the Southeastern United States

    USDA-ARS?s Scientific Manuscript database

    The primary focus of the stone fruit rootstock program at Byron, Georgia has been the development of disease resistant rootstocks for peach. Historically peach tree short life (PTSL), aka ‘Bacterial Canker Complex’, and Armillaria root rot (ARR) have been the two most important causes of premature ...

  16. Mechanical thinning pillar peach trees - second year results and observations

    USDA-ARS?s Scientific Manuscript database

    Columnar (pillar) form peach trees were mechanically thinned at 50 days after full bloom during the pit hardening stage of development. A spike-drum mechanical shaker, which showed promise for peach fruit thinning, during preliminary tests in 2005 was used to remove the young fruits. The shaker wa...

  17. A Parent Satisfaction Survey for Project PEACH. Report #7963.

    ERIC Educational Resources Information Center

    Scheiner, Louis

    A questionnaire was designed to determine parent perceptions of and degree of satisfaction with the services provided by Philadelphia's Prescriptive Educational Approach to Children with Handicaps (Project PEACH). Project PEACH provided diagnostic, referral, and prescriptive educational services for preschool children. Five areas were covered by…

  18. A Parent Satisfaction Survey for Project PEACH. Report #7963.

    ERIC Educational Resources Information Center

    Scheiner, Louis

    A questionnaire was designed to determine parent perceptions of and degree of satisfaction with the services provided by Philadelphia's Prescriptive Educational Approach to Children with Handicaps (Project PEACH). Project PEACH provided diagnostic, referral, and prescriptive educational services for preschool children. Five areas were covered by…

  19. 7 CFR 457.153 - Peach crop insurance provisions.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... each optional unit is: (a) Located on non-contiguous land; or (b) By fresh and processing as specified... not receive the average price for U.S. Extra No. 1 peach. Marketable. Peach production acceptable for... bearing and non-bearing trees on insurable and uninsurable acreage; (3) The age of trees, variety, and...

  20. 7 CFR 457.153 - Peach crop insurance provisions.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... each optional unit is: (a) Located on non-contiguous land; or (b) By fresh and processing as specified... not receive the average price for U.S. Extra No. 1 peach. Marketable. Peach production acceptable for... bearing and non-bearing trees on insurable and uninsurable acreage; (3) The age of trees, variety, and...

  1. Grass competition may benefit high density peach orchards

    USDA-ARS?s Scientific Manuscript database

    Previous research demonstrated that grass competition dwarfed and reduced the yield of individual peach trees [Prunus persica (L.) Batsch] grown in narrow vegetation free areas (VFA). In this report, the area-based yield of two peach cultivars, 'Redskin' and 'Jersey Dawn' on 'Lovell', was estimated...

  2. Ehancing disease resistance in peach fruit with methyl jasmonate

    USDA-ARS?s Scientific Manuscript database

    The effect of methyl jasmonate (MeJA) on postharvest diseases caused by P. expansum, B. cinerea and R. stolonifer in peach fruit (Prunus persica Batsch cv Dahebai) and the possible mechanisms involved were investigated. Peaches were harvested at the firm-mature stage and treated with 1 or 500 µmol/L...

  3. Foliar nickel application can increase the incidence of peach tree short life and consequent peach tree mortality

    USDA-ARS?s Scientific Manuscript database

    The ability of postplant nickel (Ni) foliar application to suppress Mesocriconema xenoplax populations and thereby prolong tree survival of peach trees on a peach tree short life (PTSL) site was investigated from 2004-2011. The study was conducted in an orchard infested with M. xenoplax and a histo...

  4. Improvements to the original NUREG-1150 accident sequence analyses

    SciTech Connect

    Cramond, W.R.; Camp, A.L.

    1987-01-01

    Since the accident sequence analyses to support the draft NUREG-1150 were published (NUREG/CR-4550), comments have been received from the utilities, the Nuclear Regulatory Commission, the nuclear industry, and the public. It is the intent to incorporate comments to the extent possible, along with anticipated changes produced by the analysis teams. The purpose of this paper is to identify the important comments and issues that will be addressed for each plant during the reanalysis. There are a few general changes in the methodology that apply to all of the plants. The most important change is an improved uncertainty analysis, including a more comprehensive treatment of uncertainty issues and a more defensible approach to eliciting expert opinion on these issues. Another important change is the addition of external events to the analysis of the Surry and Peach Bottom plants. These and other changes are discussed in this paper. 8 refs.

  5. A genome-wide analysis of MADS-box genes in peach [Prunus persica (L.) Batsch].

    PubMed

    Wells, Christina E; Vendramin, Elisa; Jimenez Tarodo, Sergio; Verde, Ignazio; Bielenberg, Douglas G

    2015-02-07

    MADS-box genes encode a family of eukaryotic transcription factors distinguished by the presence of a highly-conserved ~58 amino acid DNA-binding and dimerization domain (the MADS-box). The central role played by MADS-box genes in peach endodormancy regulation led us to examine this large gene family in more detail. We identified the locations and sequences of 79 MADS-box genes in peach, separated them into established subfamilies, and broadly surveyed their tissue-specific and dormancy-induced expression patterns using next-generation sequencing. We then focused on the dormancy-related SVP/AGL24 and FLC subfamilies, comparing their numbers and phylogenetic relationships with those of other sequenced woody perennial genomes. We identified 79 MADS-box genes distributed across all eight peach chromosomes and frequently located in clusters of two or more genes. They encode proteins with a mean length of 248 ± 72 amino acids and include representatives from most of the thirteen Type II (MIKC) subfamilies, as well as members of the Type I Mα, Mβ, and Mγ subfamilies. Most Type I genes were present in species-specific monophyletic lineages, and their expression in the peach sporophyte was low or absent. Most Type II genes had Arabidopsis orthologs and were expressed at much higher levels throughout vegetative and fruit tissues. During short-day-induced growth cessation, seven Type II genes from the SVP/AGL24, AGL17, and SEP subfamilies showed significant changes in expression. Phylogenetic analyses indicated that multiple, independent expansions have taken place within the SVP/AGL24 and FLC lineages in woody perennial species. Most Type I genes appear to have arisen through tandem duplications after the divergence of the Arabidopsis and peach lineages, whereas Type II genes appear to have increased following whole genome duplication events. An exception to the latter rule occurs in the FLC and SVP/AGL24 Type II subfamilies, in which species-specific tandem

  6. The effect of insecticide application sequences on the control and insecticide resistance status of the peach-potato aphid, Myzus persicae (Hemiptera:Aphididae), on field crops of potato.

    PubMed

    Parker, William E; Howard, Julia J; Foster, Stephen P; Denholm, Ian

    2006-04-01

    Experiments were done on commercial potato crops in the UK to investigate the effect of different insecticide sequences on the control and insecticide resistance status of Myzus persicae (Sulzer). The work was done to provide field validation of similar laboratory studies done in 'field simulators'. To ensure adequate aphid populations and to influence the initial resistance status of the aphid population, cultured M. persicae from a clone of known resistance status (esterase R1, kdr heterozygote, non-MACE (modified acetylcholinesterase)) were inoculated into both experiments. Two-spray programmes starting with lambda-cyhalothrin (a pyrethroid insecticide) gave poor control in comparison with programmes starting with pirimicarb (a carbamate insecticide) or pirimicarb-containing mixtures. This concurred closely with the results obtained from single applications in field simulator studies. Treatment sequences containing pymetrozine (a pyridine azomethine insecticide) were also effective, though slower-acting. This again concurs with field simulator studies. The proportions of aphids carrying different resistance mechanisms were largely unaffected by treatment in these experiments. The implications of these results for field control strategies are discussed. Copyright (c) 2006 Society of Chemical Industry.

  7. "De-novo" amino acid sequence elucidation of protein G'e by combined "Top-Down" and "Bottom-Up" mass spectrometry

    NASA Astrophysics Data System (ADS)

    Yefremova, Yelena; Al-Majdoub, Mahmoud; Opuni, Kwabena F. M.; Koy, Cornelia; Cui, Weidong; Yan, Yuetian; Gross, Michael L.; Glocker, Michael O.

    2015-03-01

    Mass spectrometric de-novo sequencing was applied to review the amino acid sequence of a commercially available recombinant protein Ǵ with great scientific and economic importance. Substantial deviations to the published amino acid sequence (Uniprot Q54181) were found by the presence of 46 additional amino acids at the N-terminus, including a so-called "His-tag" as well as an N-terminal partial α- N-gluconoylation and α- N-phosphogluconoylation, respectively. The unexpected amino acid sequence of the commercial protein G' comprised 241 amino acids and resulted in a molecular mass of 25,998.9 ± 0.2 Da for the unmodified protein. Due to the higher mass that is caused by its extended amino acid sequence compared with the original protein G' (185 amino acids), we named this protein "protein G'e." By means of mass spectrometric peptide mapping, the suggested amino acid sequence, as well as the N-terminal partial α- N-gluconoylations, was confirmed with 100% sequence coverage. After the protein G'e sequence was determined, we were able to determine the expression vector pET-28b from Novagen with the Xho I restriction enzyme cleavage site as the best option that was used for cloning and expressing the recombinant protein G'e in E. coli. A dissociation constant ( K d ) value of 9.4 nM for protein G'e was determined thermophoretically, showing that the N-terminal flanking sequence extension did not cause significant changes in the binding affinity to immunoglobulins.

  8. Genome-wide view of genetic diversity reveals paths of selection and cultivar differentiation in peach domestication

    PubMed Central

    Akagi, Takashi; Hanada, Toshio; Yaegaki, Hideaki; Gradziel, Thomas M.; Tao, Ryutaro

    2016-01-01

    Domestication and cultivar differentiation are requisite processes for establishing cultivated crops. These processes inherently involve substantial changes in population structure, including those from artificial selection of key genes. In this study, accessions of peach (Prunus persica) and its wild relatives were analysed genome-wide to identify changes in genetic structures and gene selections associated with their differentiation. Analysis of genome-wide informative single-nucleotide polymorphism loci revealed distinct changes in genetic structures and delineations among domesticated peach and its wild relatives and among peach landraces and modern fruit (F) and modern ornamental (O-A) cultivars. Indications of distinct changes in linkage disequilibrium extension/decay and of strong population bottlenecks or inbreeding were identified. Site frequency spectrum- and extended haplotype homozygosity-based evaluation of genome-wide genetic diversities supported selective sweeps distinguishing the domesticated peach from its wild relatives and each F/O-A cluster from the landrace clusters. The regions with strong selective sweeps harboured promising candidates for genes subjected to selection. Further sequence-based evaluation further defined the candidates and revealed their characteristics. All results suggest opportunities for identifying critical genes associated with each differentiation by analysing genome-wide genetic diversity in currently established populations. This approach obviates the special development of genetic populations, which is particularly difficult for long-lived tree crops. PMID:27085183

  9. Genome-wide analysis of the homeodomain-leucine zipper (HD-ZIP) gene family in peach (Prunus persica).

    PubMed

    Zhang, C H; Ma, R J; Shen, Z J; Sun, X; Korir, N K; Yu, M L

    2014-04-08

    In this study, 33 homeodomain-leucine zipper (HD-ZIP) genes were identified in peach using the HD-ZIP amino acid sequences of Arabidopsis thaliana as a probe. Based on the phylogenetic analysis and the individual gene or protein characteristics, the HD-ZIP gene family in peach can be classified into 4 subfamilies, HD-ZIP I, II, III, and IV, containing 14, 7, 4, and 8 members, respectively. The most closely related peach HD-ZIP members within the same subfamilies shared very similar gene structure in terms of either intron/exon numbers or lengths. Almost all members of the same subfamily shared common motif compositions, thereby implying that the HD-ZIP proteins within the same subfamily may have functional similarity. The 33 peach HD-ZIP genes were distributed across scaffolds 1 to 7. Although the primary structure varied among HD-ZIP family proteins, their tertiary structures were similar. The results from this study will be useful in selecting candidate genes from specific subfamilies for functional analysis.

  10. Genome-wide view of genetic diversity reveals paths of selection and cultivar differentiation in peach domestication.

    PubMed

    Akagi, Takashi; Hanada, Toshio; Yaegaki, Hideaki; Gradziel, Thomas M; Tao, Ryutaro

    2016-06-01

    Domestication and cultivar differentiation are requisite processes for establishing cultivated crops. These processes inherently involve substantial changes in population structure, including those from artificial selection of key genes. In this study, accessions of peach (Prunus persica) and its wild relatives were analysed genome-wide to identify changes in genetic structures and gene selections associated with their differentiation. Analysis of genome-wide informative single-nucleotide polymorphism loci revealed distinct changes in genetic structures and delineations among domesticated peach and its wild relatives and among peach landraces and modern fruit (F) and modern ornamental (O-A) cultivars. Indications of distinct changes in linkage disequilibrium extension/decay and of strong population bottlenecks or inbreeding were identified. Site frequency spectrum- and extended haplotype homozygosity-based evaluation of genome-wide genetic diversities supported selective sweeps distinguishing the domesticated peach from its wild relatives and each F/O-A cluster from the landrace clusters. The regions with strong selective sweeps harboured promising candidates for genes subjected to selection. Further sequence-based evaluation further defined the candidates and revealed their characteristics. All results suggest opportunities for identifying critical genes associated with each differentiation by analysing genome-wide genetic diversity in currently established populations. This approach obviates the special development of genetic populations, which is particularly difficult for long-lived tree crops.

  11. Identification of plum and peach seed proteins by nLC-MS/MS via combinatorial peptide ligand libraries.

    PubMed

    González-García, Estefanía; Marina, María Luisa; García, María Concepción; Righetti, Pier Giorgio; Fasoli, Elisa

    2016-10-04

    Plum (Prunus domestica L.) and peach (Prunus persica (L.) Batsch) seed proteins are a source of bioactive peptides. These seeds, though, are usual residues produced during canning and beverage preparation that, in most cases, are irreversibly lost. The recovery and identification of these proteins might be of importance in human nutrition. This work employs the combinatorial peptide ligand libraries (CPLLs) technology as a tool to reduce the proteins dynamic concentration range. The most suitable extraction and CPLL capture conditions have been obtained and applied for the comprehensive identification of seed proteins. The analysis of recovered species by nLC-MS/MS has allowed the identification of 141 and 97 unique gene products from plum and peach seeds, respectively. It was possible to identify 16 proteins belonging to the Prunus genus. Moreover, a high number of histones and seed storage proteins were identified. Additionally, 21 and 14 bioactive peptides previously identified were found within protein sequences in plum and peach seeds, respectively. Plums and peaches seeds are cheap sources of proteins that are irretrievably lost after canning and beverage production. Although this kind of residues has been used in animal feed or production of biofuel, they are usually incinerated or sent to landfills, wasting their huge potential. In order to exploit this, it is important to comprehensively study proteins present in plum and peach seeds. Nevertheless, since proteomics analysis is in most cases handicapped by the presence of high-abundance proteins masking the detection of the low-abundance ones, it is important to overcome this challenge. In this sense, combinatorial peptide ligand libraries (CPLLs) have been used in this work to reduce the dynamic protein concentration range to enable the identification of a higher amount of proteins than employing conventional methods. In this work, the better extracting conditions have been optimized and up to 141 and 97

  12. Carbon Fluxes in Mature Peach Leaves

    PubMed Central

    Moing, Annick; Carbonne, Francis; Rashad, Mohamed H.; Gaudillère, Jean-Pierre

    1992-01-01

    The turnover and transport of sugars are described in peach (Prunus persica L. Batsch), a species exporting both sucrose and sorbitol. Apparent export rate was slower in peach leaves than in leaves of herbaceous species. Sorbitol was the major soluble end product of photosynthesis and the major soluble carbohydrate in the leaf (higher than sucrose). Carbon fluxes were described using 14C labeling, radioactivity loss curves, and compartmental analysis during the second half of the photoperiod when chemical steady state was reached for soluble carbohydrates. The measured specific radioactivity of sucrose was typical of a primary product. The delayed decrease in specific radioactivity of sorbitol indicated that part of it was secondarily synthesized. Sucrose is proposed to be the carbon source for the delayed synthesis of sorbitol in the light. The sorbitol to sucrose ratio was higher in the petiole than in the leaf tissues. In phloem sap, obtained using stylectomy of aphids and collected from the main stem between source leaves and apex, this ratio was lower than in the petiole, suggesting a preferential sorbitol demand by sinks. PMID:16653212

  13. Complete Genome Sequence of Methanohalophilus halophilus DSM 3094T, Isolated from a Cyanobacterial Mat and Bottom Deposits at Hamelin Pool, Shark Bay, Northwestern Australia

    PubMed Central

    Corre, Erwan; Guan, Yue; Vinu, Manikandan; La Cono, Violetta; Yakimov, Mickail; Stingl, Ulrich; Toffin, Laurent

    2017-01-01

    ABSTRACT   The complete genome sequence of Methanohalophilus halophilus DSM 3094T, a member of the Methanosarcinaceae family and the Methanosarcianales order, consists of 2,022,959 bp in one contig and contains 2,137 predicted genes. The genome is consistent with a halophilic methylotrophic anaerobic lifestyle, including the methylotrophic and CO2-H2 methanogensis pathways. PMID:28209822

  14. High-density mapping suggests cytoplasmic male sterility with two restorer genes in almond × peach progenies.

    PubMed

    Donoso, José Manuel; Eduardo, Iban; Picañol, Roger; Batlle, Ignasi; Howad, Werner; Aranzana, María José; Arús, Pere

    2015-01-01

    Peach (Prunus persica) and almond (Prunus dulcis) are two sexually compatible species that produce fertile offspring. Almond, a highly polymorphic species, is a potential source of new genes for peach that has a strongly eroded gene pool. Here we describe the genetics of a male sterile phenotype that segregated in two almond ('Texas') × peach ('Earlygold') progenies: an F2 (T×E) and a backcross one (T1E) to the 'Earlygold' parent. High-density maps were developed using a 9k peach SNP chip and 135 simple-sequence repeats. Three highly syntenic and collinear maps were obtained: one for the F2 (T×E) and two for the backcross, T1E (for the hybrid) and E (for 'Earlygold'). A major reduction of recombination was observed in the interspecific maps (T×E and T1E) compared to the intraspecific parent (E). The E map also had extensive monomorphic genomic regions suggesting the presence of large DNA fragments identical by descent. Our data for the male sterility character were consistent with the existence of cytoplasmic male sterility, where individuals having the almond cytoplasm required the almond allele in at least one of two independent restorer genes, Rf1 and Rf2, to be fertile. The restorer genes were located in a 3.4 Mbp fragment of linkage group 2 (Rf1) and 1.4 Mbp of linkage group 6 (Rf2). Both fragments contained several genes coding for pentatricopeptide proteins, demonstrated to be responsible for restoring fertility in other species. The implications of these results for using almond as a source of novel variability in peach are discussed.

  15. High-density mapping suggests cytoplasmic male sterility with two restorer genes in almond × peach progenies

    PubMed Central

    Donoso, José Manuel; Eduardo, Iban; Picañol, Roger; Batlle, Ignasi; Howad, Werner; Aranzana, María José; Arús, Pere

    2015-01-01

    Peach (Prunus persica) and almond (Prunus dulcis) are two sexually compatible species that produce fertile offspring. Almond, a highly polymorphic species, is a potential source of new genes for peach that has a strongly eroded gene pool. Here we describe the genetics of a male sterile phenotype that segregated in two almond (‘Texas’) × peach (‘Earlygold’) progenies: an F2 (T×E) and a backcross one (T1E) to the ‘Earlygold’ parent. High-density maps were developed using a 9k peach SNP chip and 135 simple-sequence repeats. Three highly syntenic and collinear maps were obtained: one for the F2 (T×E) and two for the backcross, T1E (for the hybrid) and E (for ‘Earlygold’). A major reduction of recombination was observed in the interspecific maps (T×E and T1E) compared to the intraspecific parent (E). The E map also had extensive monomorphic genomic regions suggesting the presence of large DNA fragments identical by descent. Our data for the male sterility character were consistent with the existence of cytoplasmic male sterility, where individuals having the almond cytoplasm required the almond allele in at least one of two independent restorer genes, Rf1 and Rf2, to be fertile. The restorer genes were located in a 3.4 Mbp fragment of linkage group 2 (Rf1) and 1.4 Mbp of linkage group 6 (Rf2). Both fragments contained several genes coding for pentatricopeptide proteins, demonstrated to be responsible for restoring fertility in other species. The implications of these results for using almond as a source of novel variability in peach are discussed. PMID:26504569

  16. Seasonal expression of a dehydrin gene in sibling deciduous and evergreen genotypes of peach (Prunus persica [L.] Batsch).

    PubMed

    Artlip, T S; Callahan, A M; Bassett, C L; Wisniewski, M E

    1997-01-01

    A cDNA library was created from cold-acclimated bark tissue of peach and selectively probed using an antibody directed against the lysine-rich consensus region of dehydrin proteins. Several clones were thus obtained which had a high degree of sequence similarity to other dehydrin genes. Northern analysis, using clone 5a, indicated that a 1.8 kb transcript was seasonally expressed in sibling deciduous and evergreen genotypes of peach, and also inducible by water deficit in cv. Rio Oso Gem. The evergreen and deciduous genotypes differ significantly in both their ability to cold-acclimate and in the seasonal expression of the dehydrin transcript and protein. In both genotypes, the transcript was maximally expressed during winter and undetectable in May-July. The evergreen genotype (less cold-tolerant), however, displayed transcript accumulation which lagged behind and declined sooner than in the deciduous genotype. Protein expression was similar to transcript expression, however, protein expression in the evergreen genotype lagged considerably behind transcript accumulation in the fall. This indicates that several levels of regulation of dehydrin proteins may exist during cold acclimation. A genomic clone (G10a) was isolated which contained the full-length dehydrin gene, designated ppdhn1. The peach dehydrin gene encodes 472 amino acids with a predicted size of 50,020 Da. The encoded protein (PCA60) contains nine of the lysine-rich repeats characteristic of dehydrins and two DEYGNP motifs at the amino acid terminus. A genomic blot, probed with clone 5a under stringent conditions, indicated that one or two highly homologous genes are present in peach, whereas an additional member was detected under low-stringency conditions. It is suggested that several members of the dehydrin gene family may exist in peach that vary in their relation to ppdhn1.

  17. Gene expression profiling of peach fruit during stone development

    USDA-ARS?s Scientific Manuscript database

    The availability of seedless grapes and watermelons has energized these fruit markets and resulted in increased consumption. Seedless stone fruits including peaches, plums, and cherries would undoubtedly have similar positive impacts on these industries. However, this would require the elimination...

  18. Digital computer processing of peach orchard multispectral aerial photography

    NASA Technical Reports Server (NTRS)

    Atkinson, R. J.

    1976-01-01

    Several methods of analysis using digital computers applicable to digitized multispectral aerial photography, are described, with particular application to peach orchard test sites. This effort was stimulated by the recent premature death of peach trees in the Southeastern United States. The techniques discussed are: (1) correction of intensity variations by digital filtering, (2) automatic detection and enumeration of trees in five size categories, (3) determination of unhealthy foliage by infrared reflectances, and (4) four band multispectral classification into healthy and declining categories.

  19. Biocontrol of postharvest Rhizopus decay of peaches with Pichia caribbica.

    PubMed

    Xu, Baitian; Zhang, Hongyin; Chen, Keping; Xu, Qin; Yao, Yao; Gao, Hui

    2013-08-01

    A new yeast antagonist, Pichia caribbica, isolated in our laboratory from the soil collected from unsprayed orchards, was evaluated for its biocontrol capability against Rhizopus stolonifer on peaches and the possible mechanisms involved. The decay incidence and lesion diameter of Rhizopus decay of peaches treated by P. caribbica were significantly reduced compared with the control fruits, and the higher the concentration of P. caribbica, the better the efficacy of the biocontrol. Rapid colonization of the yeast in peach wounds stored at 25 °C was observed. In peaches, the activities of peroxidase (POD), catalase (CAT), and phenylalanine ammonia-lyase (PAL) were significantly induced by P. caribbica treatment compared to those of the control fruits. All these results indicated that P. caribbica has a great potential for the development of commercial formulations to control postharvest Rhizopus decay of peaches. Its modes of action were based on competition for space and nutrients with pathogens, inducement of activities of defense-related enzymes such as POD, CAT, and PAL of peaches.

  20. Hubble Space Telescope observations of the Kepler-field cluster NGC 6819 - I. The bottom of the white dwarf cooling sequence

    NASA Astrophysics Data System (ADS)

    Bedin, L. R.; Salaris, M.; Anderson, J.; Cassisi, S.; Milone, A. P.; Piotto, G.; King, I. R.; Bergeron, P.

    2015-04-01

    We use Hubble Space Telescope (HST) to reach the end of the white dwarf (WD) cooling sequence (CS) in the solar-metallicity open cluster NGC 6819. Our photometry and completeness tests show a sharp drop in the number of WDs along the CS at magnitudes fainter than mF606W = 26.050 ± 0.075. This implies an age of 2.25 ± 0.20 Gyr, consistent with the age of 2.25 ± 0.30 Gyr obtained from fits to the main-sequence turn-off. The use of different WD cooling models and initial-final-mass relations have a minor impact the WD age estimate, at the level of ˜0.1 Gyr. As an important by-product of this investigation we also release, in electronic format, both the catalogue of all the detected sources and the atlases of the region (in two filters). Indeed, this patch of sky studied by HST (of size ˜70 arcmin2) is entirely within the main Kepler-mission field, so the high-resolution images and deep catalogues will be particularly useful.

  1. Peach latent mosaic viroid: not so latent.

    PubMed

    Flores, Ricardo; Delgado, Sonia; Rodio, María-Elena; Ambrós, Silvia; Hernández, Carmen; Serio, Francesco D I

    2006-07-01

    SUMMARY Taxonomy: Peach latent mosaic viroid (PLMVd) is the type species of the genus Pelamoviroid within the family Avsunviroidae of chloroplastic viroids with hammerhead ribozymes. Physical properties: A small circular RNA of 336-351 nt (differences in size result from the absence or presence of certain insertions) adopting a branched conformation stabilized by a pseudoknot between two kissing loops. This particular conformation is most likely responsible for the insolubility of PLMVd in highly saline conditions (in which other viroids adopting a rod-like conformation are soluble). Both polarity strands are able to form hammerhead structures and to self-cleave during replication as predicted by these ribozymes. Biological properties: Although most infections occur without conspicuous symptoms, certain PLMVd isolates induce leaf mosaics, blotches and in the most extreme cases albinism (peach calico, PC), flower streaking, delays in foliation, flowering and ripening, deformations and decolorations of fruits, which usually present cracked sutures and enlarged roundish stones, bud necrosis, stem pitting and premature ageing of the trees, which also adopt a characteristic growing pattern (open habit). The molecular determinant for PC has been mapped at a 12-14-nt insertion that folds into a hairpin capped by a U-rich loop present only in certain variants. PLMVd is horizontally transmitted by the propagation of infected buds and to a lesser extent by pruning tools and aphids, but not by pollen; the viroid is not vertically transmitted through seed. Interesting features: This provides a suitable system for studying how a minimal non-protein-coding catalytic RNA replicates (subverting a DNA-dependent RNA polymerase to transcribe an RNA template), moves, interferes with the metabolism of its host (inciting specific symptoms and a defensive RNA silencing response) and evolves following a quasi-species model characterized by a complex spectrum of variants.

  2. Genome-wide analysis of the AP2/ERF superfamily in peach (Prunus persica).

    PubMed

    Zhang, C H; Shangguan, L F; Ma, R J; Sun, X; Tao, R; Guo, L; Korir, N K; Yu, M L

    2012-10-17

    We identified 131 AP2/ERF (APETALA2/ethylene-responsive factor) genes in material from peach using the gene sequences of AP2/ERF amino acids of Arabidopsis thaliana (Brassicaceae) as probes. Based on the number of AP2/ERF domains and individual gene characteristics, the AP2/ERF superfamily gene in peach can be classified broadly into three families, ERF (ethylene-responsive factor), RAV (related to ABI3/VP1), and AP2 (APETALA2), containing 104, 5, and 21 members, respectively, along with a solo gene (ppa005376m). The 104 genes in the ERF family were further divided into 11 groups based on the group classification made for Arabidopsis. The scaffold localizations of the AP2/ERF genes indicated that 129 AP2/ERF genes were all located on scaffolds 1 to 8, except for two genes, which were on scaffolds 17 and 10. Although the primary structure varied among AP2/ERF superfamily proteins, their tertiary structures were similar. Most ERF family genes have no introns, while members of the AP2 family have more introns than genes in the ERF and RAV families. All sequences of AP2 family genes were disrupted by introns into several segments of varying sizes. The expression of the AP2/ERF superfamily genes was highest in the mesocarp; it was far higher than in the other seven tissues that we examined, implying that AP2/ERF superfamily genes play an important role in fruit growth and development in the peach. These results will be useful for selecting candidate genes from specific subgroups for functional analysis.

  3. The HST large programme on ω Centauri - I. Multiple stellar populations at the bottom of the main sequence probed in NIR-Optical

    NASA Astrophysics Data System (ADS)

    Milone, A. P.; Marino, A. F.; Bedin, L. R.; Anderson, J.; Apai, D.; Bellini, A.; Bergeron, P.; Burgasser, A. J.; Dotter, A.; Rees, J. M.

    2017-07-01

    As part of a large investigation with Hubble Space Telescope to study the faintest stars within the globular cluster ω Centauri, in this work we present early results on the multiplicity of its main sequence (MS) stars, based on deep optical and near-infrared observations. By using appropriate colour-magnitude diagrams, we have identified, for the first time, the two main stellar Populations I and II along the entire MS, from the turn-off towards the hydrogen-burning limit. We have compared the observations with suitable synthetic spectra of MS stars and conclude that the two main sequences (MSs) are consistent with stellar populations with different metallicity, helium and light-element abundance. Specifically, MS-I corresponds to a metal-poor stellar population ([Fe/H] ˜ -1.7) with Y ˜ 0.25 and [O/Fe] ˜ 0.30. The MS-II hosts helium-rich (Y ˜ 0.37-0.40) stars with metallicity ranging from [Fe/H] ˜ -1.7 to -1.4. Below the MS knee (mF160W ˜ 19.5), our photometry reveals that each of the two main MSs hosts stellar subpopulations with different oxygen abundances, with very O-poor stars ([O/Fe] ˜ -0.5) populating the MS-II. Such a complexity has never been observed in previous studies of M-dwarfs in globular clusters. A few months before the launch of the James Webb Space Telescope, these results demonstrate the power of optical and near-infrared photometry in the study of multiple stellar populations in globular clusters.

  4. Commercial scale irradiation for insect disinfestation preserves peach quality

    NASA Astrophysics Data System (ADS)

    McDonald, Heather; McCulloch, Mary; Caporaso, Fred; Winborne, Ian; Oubichon, Michon; Rakovski, Cyril; Prakash, Anuradha

    2012-06-01

    Irradiation is approved as a generic quarantine treatment by the US Department of Agriculture, Animal and Plant Health Inspection Service. Due to the effectiveness of irradiation in controlling insects on commodities, there is a growing need to understand the effects of low dose irradiation on fruit quality. The goal of this study was to determine the sensitivity of peaches (Prunus persica) to irradiation, and secondly, to determine the effect of commercial scale treatment on shelf-life, overall quality and consumer liking. Six varieties of peaches were irradiated in small batches at 0.29, 0.49, 0.69 and 0.90 kGy to observe the sensitivity of peaches at different dose levels. Changes in quality were evaluated by 8 trained panelists using descriptive analysis. Sensory characteristics (color, smoothness, aroma, touch firmness, mouth firmness, graininess, overall flavor and off-flavor) were evaluated at 2-4 day intervals and untreated samples served as control. To simulate commercial treatment, peaches were irradiated in pallet quantities at a target dose level of 0.4 kGy. The average absorbed dose was 0.66 kGy with an average dose uniformity ratio of 1.57. Commercially treated peaches were evaluated by 40-80 untrained consumers for acceptability routinely throughout the shelf life. Titratable acidity, Brix, texture and weight loss were also monitored for both commercial and small scale irradiated peaches. There was no dose effect on TA, Brix and weight loss due to irradiation. Peaches irradiated at 0.69 and 0.90 kGy were darker in flesh color, more juicy and less firm as determined by the trained panel and analytical pressure tests. Commercial scale irradiation did not adversely affect shelf life but was seen to enhance ripening. This, however, was perceived as a positive change by consumers. Overall, consumers rated the acceptability of irradiated peaches higher than untreated peaches. Statistical analysis was performed using linear mixed models to find determinates

  5. Peach genetic resources: diversity, population structure and linkage disequilibrium

    PubMed Central

    2013-01-01

    Background Peach (Prunus persica (L.) Batsch) is one of the most important model fruits in the Rosaceae family. Native to the west of China, where peach has been domesticated for more than 4,000 years, its cultivation spread from China to Persia, Mediterranean countries and to America. Chinese peach has had a major impact on international peach breeding programs due to its high genetic diversity. In this research, we used 48 highly polymorphic SSRs, distributed over the peach genome, to investigate the difference in genetic diversity, and linkage disequilibrium (LD) among Chinese cultivars, and North American and European cultivars, and the evolution of current peach cultivars. Results In total, 588 alleles were obtained with 48 SSRs on 653 peach accessions, giving an average of 12.25 alleles per locus. In general, the average value of observed heterozygosity (0.47) was lower than the expected heterozygosity (0.60). The separate analysis of groups of accessions according to their origin or reproductive strategies showed greater variability in Oriental cultivars, mainly due to the high level of heterozygosity in Chinese landraces. Genetic distance analysis clustered the cultivars into two main groups: one included four wild related Prunus, and the other included most of the Oriental and Occidental landraces and breeding cultivars. STRUCTURE analysis assigned 469 accessions to three subpopulations: Oriental (234), Occidental (174), and Landraces (61). Nested STRUCTURE analysis divided the Oriental subpopulation into two different subpopulations: ‘Yu Lu’ and ‘Hakuho’. The Occidental breeding subpopulation was also subdivided into nectarine and peach subpopulations. Linkage disequilibrium (LD) analysis in each of these subpopulations showed that the percentage of linked (r2 > 0.1) intra-chromosome comparisons ranged between 14% and 47%. LD decayed faster in Oriental (1,196 Kbp) than in Occidental (2,687 Kbp) samples. In the ‘Yu Lu’ subpopulation there

  6. Cryptosporidium avian genotype III as a possible causative agent of chronic vomiting in peach-faced lovebirds (Agapornis roseicollis).

    PubMed

    Makino, Ikuko; Abe, Niichiro; Reavill, Drury R

    2010-09-01

    In the present study, Cryptosporidium oocysts were found, by light microscopy, in 37 fecal samples of peach-faced lovebirds (Agapornis roseicollis). Cryptosporidium avian genotype III was isolated in 13 of the 37 infected birds by sequence analysis of the small subunit ribosomal RNA and the actin genes. All of the birds showed chronic vomiting and weight loss with enlargement of isthmi, narrowed proventricular lumens, and thickened proventricular walls radiographically. Cryptosporidium parasites were found only in the ductal epithelium of the proventricular glands in three of the tissue samples provided for necropsy. To date, there have been no reports concerning the pathogenicity, nor the location, of avian genotype III in avian hosts. Our report confirms, for the first time, the presence of avian genotype III in peach-faced lovebirds in Japan and also reveals the location in the avian host.

  7. Bottom head assembly

    DOEpatents

    Fife, A.B.

    1998-09-01

    A bottom head dome assembly is described which includes, in one embodiment, a bottom head dome and a liner configured to be positioned proximate the bottom head dome. The bottom head dome has a plurality of openings extending there through. The liner also has a plurality of openings extending there through, and each liner opening aligns with a respective bottom head dome opening. A seal is formed, such as by welding, between the liner and the bottom head dome to resist entry of water between the liner and the bottom head dome at the edge of the liner. In the one embodiment, a plurality of stub tubes are secured to the liner. Each stub tube has a bore extending there through, and each stub tube bore is coaxially aligned with a respective liner opening. A seat portion is formed by each liner opening for receiving a portion of the respective stub tube. The assembly also includes a plurality of support shims positioned between the bottom head dome and the liner for supporting the liner. In one embodiment, each support shim includes a support stub having a bore there through, and each support stub bore aligns with a respective bottom head dome opening. 2 figs.

  8. Bottom head assembly

    DOEpatents

    Fife, Alex Blair

    1998-01-01

    A bottom head dome assembly which includes, in one embodiment, a bottom head dome and a liner configured to be positioned proximate the bottom head dome is described. The bottom head dome has a plurality of openings extending therethrough. The liner also has a plurality of openings extending therethrough, and each liner opening aligns with a respective bottom head dome opening. A seal is formed, such as by welding, between the liner and the bottom head dome to resist entry of water between the liner and the bottom head dome at the edge of the liner. In the one embodiment, a plurality of stub tubes are secured to the liner. Each stub tube has a bore extending therethrough, and each stub tube bore is coaxially aligned with a respective liner opening. A seat portion is formed by each liner opening for receiving a portion of the respective stub tube. The assembly also includes a plurality of support shims positioned between the bottom head dome and the liner for supporting the liner. In one embodiment, each support shim includes a support stub having a bore therethrough, and each support stub bore aligns with a respective bottom head dome opening.

  9. Biological Control of the Phytoparasitic Nematode Mesocriconema xenoplax on Peach Trees

    PubMed Central

    Kluepfel, D. A.; Nyczepir, A. P.; Lawrence, J. E.; Wechter, W. P.; Leverentz, B.

    2002-01-01

    Seven fluorescent Pseudomonas spp. capable of inhibiting reproduction of Mesocriconema xenoplax have been isolated from soil sites that suppress both nematode multiplication and Peach Tree Short Life (PTSL). One of these seven strains, Pseudomonas sp. BG33R, inhibits M. xenoplax multiplication in vivo and egg hatch in vitro. Mesocriconema xenoplax populations on peach seedlings inoculated with BG33R and planted into soil-solarized field plots remained at or below the economic threshold for nematicide treatment in South Carolina for nearly 18 months. Soil solarization alone induced a shift toward a microbial community that was suppressive to nematode multiplication. Additionally, five Tn5 mutants of BG33R, lacking the ability to kill eggs, have been generated. The Tn5 insertion site in each mutant has been cloned and sequenced. DNA sequence analysis has revealed a high degree of homology to several genes of interest because of their potential involvement in the production of the egg-kill factor. These Tn5 egg-kill negative mutants also no longer produce protease or salicylic acid while producing nearly twice the amount of fluorescent siderophore as the wild type parent. PMID:19265918

  10. Biological control of the phytoparasitic nematode Mesocriconema xenoplax on peach trees.

    PubMed

    Kluepfel, D A; Nyczepir, A P; Lawrence, J E; Wechter, W P; Leverentz, B

    2002-06-01

    Seven fluorescent Pseudomonas spp. capable of inhibiting reproduction of Mesocriconema xenoplax have been isolated from soil sites that suppress both nematode multiplication and Peach Tree Short Life (PTSL). One of these seven strains, Pseudomonas sp. BG33R, inhibits M. xenoplax multiplication in vivo and egg hatch in vitro. Mesocriconema xenoplax populations on peach seedlings inoculated with BG33R and planted into soil-solarized field plots remained at or below the economic threshold for nematicide treatment in South Carolina for nearly 18 months. Soil solarization alone induced a shift toward a microbial community that was suppressive to nematode multiplication. Additionally, five Tn5 mutants of BG33R, lacking the ability to kill eggs, have been generated. The Tn5 insertion site in each mutant has been cloned and sequenced. DNA sequence analysis has revealed a high degree of homology to several genes of interest because of their potential involvement in the production of the egg-kill factor. These Tn5 egg-kill negative mutants also no longer produce protease or salicylic acid while producing nearly twice the amount of fluorescent siderophore as the wild type parent.

  11. Fruit characters and volatile organic components in peach-to-nectarine mutants

    USDA-ARS?s Scientific Manuscript database

    Peach-to-nectarine mutants showed broad pleiotropic effects on fruit size, taste, and aroma, in addition to hairlessness. In this study, we compared nine fruit attributes and 27 detected volatiles in the peach progenitor, ‘Flameprince’ (FPP), its two independently discovered peach-to-nectarine mutan...

  12. 76 FR 2112 - Peach Orchard Road Groundwater Plume Site, Augusta, Richmond County, GA; Notice of Settlement

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-12

    ... AGENCY Peach Orchard Road Groundwater Plume Site, Augusta, Richmond County, GA; Notice of Settlement... costs concerning the Peach Orchard Road Groundwater Plume Site located in Augusta, Richmond County... Site name Peach Orchard Road Groundwater Plume Superfund Site by one of the following methods: http...

  13. 75 FR 77563 - Nectarines, Pears, and Peaches Grown in California; Continuance Referenda

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-13

    ... Agricultural Marketing Service 7 CFR Parts 916 and 917 Nectarines, Pears, and Peaches Grown in California... document directs that referenda be conducted among eligible California nectarine, pear, and peach growers... nectarines, pears, and peaches grown in California. DATES: The referenda will be conducted from January...

  14. 7 CFR 319.56-23 - Apricots, nectarines, peaches, plumcot, and plums from Chile.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 5 2014-01-01 2014-01-01 false Apricots, nectarines, peaches, plumcot, and plums from... and Vegetables § 319.56-23 Apricots, nectarines, peaches, plumcot, and plums from Chile. (a) Importations allowed. Apricots, nectarines, peaches, plumcot, and plums may be imported into the United States...

  15. 7 CFR 319.56-23 - Apricots, nectarines, peaches, plumcot, and plums from Chile.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 5 2013-01-01 2013-01-01 false Apricots, nectarines, peaches, plumcot, and plums from... and Vegetables § 319.56-23 Apricots, nectarines, peaches, plumcot, and plums from Chile. (a) Importations allowed. Apricots, nectarines, peaches, plumcot, and plums may be imported into the United States...

  16. 7 CFR 319.56-23 - Apricots, nectarines, peaches, plumcot, and plums from Chile.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 5 2012-01-01 2012-01-01 false Apricots, nectarines, peaches, plumcot, and plums from... and Vegetables § 319.56-23 Apricots, nectarines, peaches, plumcot, and plums from Chile. (a) Importations allowed. Apricots, nectarines, peaches, plumcot, and plums may be imported into the United States...

  17. 7 CFR 319.56-23 - Apricots, nectarines, peaches, plumcot, and plums from Chile.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 5 2010-01-01 2010-01-01 false Apricots, nectarines, peaches, plumcot, and plums from... and Vegetables § 319.56-23 Apricots, nectarines, peaches, plumcot, and plums from Chile. (a) Importations allowed. Apricots, nectarines, peaches, plumcot, and plums may be imported into the United...

  18. 7 CFR 319.56-23 - Apricots, nectarines, peaches, plumcot, and plums from Chile.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 5 2011-01-01 2011-01-01 false Apricots, nectarines, peaches, plumcot, and plums from... and Vegetables § 319.56-23 Apricots, nectarines, peaches, plumcot, and plums from Chile. (a) Importations allowed. Apricots, nectarines, peaches, plumcot, and plums may be imported into the United...

  19. Metagenomics characterization of wood decay fungi colonized in peach limb heartwood

    USDA-ARS?s Scientific Manuscript database

    Breakage of healthy-looking scaffold limbs is commonly seen in peach orchards in central Georgia, in the United States, and may have impact on the health and longevity of peach trees. White fungal mycelia were observed on the broken surface of some newly snapped, but otherwise healthy-looking peach ...

  20. 76 FR 48184 - Exelon Nuclear, Peach Bottom Atomic Power Station, Unit 1; Exemption From Certain Security...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-08

    ... but not operate the facility. All residual radioactivity from the final decommissioned plant... Containment Building, more than 99.9 percent of the estimated 0.2 megacuries of radioactivity is contained...

  1. Fine mapping and identification of a candidate gene for a major locus controlling maturity date in peach.

    PubMed

    Pirona, Raul; Eduardo, Iban; Pacheco, Igor; Da Silva Linge, Cassia; Miculan, Mara; Verde, Ignazio; Tartarini, Stefano; Dondini, Luca; Pea, Giorgio; Bassi, Daniele; Rossini, Laura

    2013-10-22

    Maturity date (MD) is a crucial factor for marketing of fresh fruit, especially those with limited shelf-life such as peach (Prunus persica L. Batsch): selection of several cultivars with differing MD would be advantageous to cover and extend the marketing season. Aims of this work were the fine mapping and identification of candidate genes for the major maturity date locus previously identified on peach linkage group 4. To improve genetic resolution of the target locus two F2 populations derived from the crosses Contender x Ambra (CxA, 306 individuals) and PI91459 (NJ Weeping) x Bounty (WxBy, 103 individuals) were genotyped with the Sequenom and 9K Illumina Peach Chip SNP platforms, respectively. Recombinant individuals from the WxBy F2 population allowed the localisation of maturity date locus to a 220 kb region of the peach genome. Among the 25 annotated genes within this interval, functional classification identified ppa007577m and ppa008301m as the most likely candidates, both encoding transcription factors of the NAC (NAM/ATAF1, 2/CUC2) family. Re-sequencing of the four parents and comparison with the reference genome sequence uncovered a deletion of 232 bp in the upstream region of ppa007577m that is homozygous in NJ Weeping and heterozygous in Ambra, Bounty and the WxBy F1 parent. However, this variation did not segregate in the CxA F2 population being the CxA F1 parent homozygous for the reference allele. The second gene was thus examined as a candidate for maturity date. Re-sequencing of ppa008301m, showed an in-frame insertion of 9 bp in the last exon that co-segregated with the maturity date locus in both CxA and WxBy F2 populations. Using two different segregating populations, the map position of the maturity date locus was refined from 3.56 Mb to 220 kb. A sequence variant in the NAC gene ppa008301m was shown to co-segregate with the maturity date locus, suggesting this gene as a candidate controlling ripening time in peach. If confirmed on other

  2. Fine mapping and identification of a candidate gene for a major locus controlling maturity date in peach

    PubMed Central

    2013-01-01

    Background Maturity date (MD) is a crucial factor for marketing of fresh fruit, especially those with limited shelf-life such as peach (Prunus persica L. Batsch): selection of several cultivars with differing MD would be advantageous to cover and extend the marketing season. Aims of this work were the fine mapping and identification of candidate genes for the major maturity date locus previously identified on peach linkage group 4. To improve genetic resolution of the target locus two F2 populations derived from the crosses Contender x Ambra (CxA, 306 individuals) and PI91459 (NJ Weeping) x Bounty (WxBy, 103 individuals) were genotyped with the Sequenom and 9K Illumina Peach Chip SNP platforms, respectively. Results Recombinant individuals from the WxBy F2 population allowed the localisation of maturity date locus to a 220 kb region of the peach genome. Among the 25 annotated genes within this interval, functional classification identified ppa007577m and ppa008301m as the most likely candidates, both encoding transcription factors of the NAC (NAM/ATAF1, 2/CUC2) family. Re-sequencing of the four parents and comparison with the reference genome sequence uncovered a deletion of 232 bp in the upstream region of ppa007577m that is homozygous in NJ Weeping and heterozygous in Ambra, Bounty and the WxBy F1 parent. However, this variation did not segregate in the CxA F2 population being the CxA F1 parent homozygous for the reference allele. The second gene was thus examined as a candidate for maturity date. Re-sequencing of ppa008301m, showed an in-frame insertion of 9 bp in the last exon that co-segregated with the maturity date locus in both CxA and WxBy F2 populations. Conclusions Using two different segregating populations, the map position of the maturity date locus was refined from 3.56 Mb to 220 kb. A sequence variant in the NAC gene ppa008301m was shown to co-segregate with the maturity date locus, suggesting this gene as a candidate controlling ripening time in

  3. A Search for Coronal Emission at the Bottom of the Main-Sequence: Stars and Brown Dwarf Candidates with Spectral Types Later than M7 and the Rotation-Activity Relation

    NASA Technical Reports Server (NTRS)

    Stringfellow, Guy

    2004-01-01

    This program intended to test whether the lowest mass stars at the bottom end of the main sequence and the lower mass brown dwarfs have coronae. If they have coronae, what are the coronal characteristics and what drives them? In the classical dynamo picture, the closed magnetic loop structure is generated near the boundary of the convective envelope and the radiative core. Stars with mass below 0.30 Msun however are fully convective, and the nature of the dynamo responsible for the generation of the coronae in this regime is poorly understood. Previous results from the ROSAT mission (e.g., Fleming et al. 1993, 1995; Schmitt et al. 1995) had confirmed three very important characteristics of M-star coronae: (1) a very high percentage of all M dwarfs have coronae (of order 85% in the local 7 pc sample), (2) those M dwarfs showing high chromospheric activity, such as having the Balmer series in emission or large/numerous optical flaring, indeed exhibit the highest coronal activity, and (3) that the maximum saturation boundary in X-ray luminosity, which amounts to 0.0001-0.001 for Lx/Lbol for the dMe stars, extends down to the current detection limit, through spectral types M7. It was likely that the incompleteness noted for result (1) above was simply a detection limit problem; for more distant sources, the X-ray fainter dM stars will drop below detection thresholds before the more X-ray luminous dMe stars. The latest stars for which direct detection of the corona had been successful were of spectral type dM7 (e.g., VB8, LHS 3003). This program proposed to obtain ROSAT HRI observations for a large number of the coolest known (at that time) stars at the bottom of the main-sequence, which had spectral types of M9 or later. Three stars were approved for observations with ROSAT-HRI totaling 180 ksec. The goal was to obtain X-ray detections or low upper limits for the three approved stars.

  4. A Search for Coronal Emission at the Bottom of the Main-Sequence: Stars and Brown Dwarf Candidates with Spectral Types Later than M7 and the Rotation-Activity Relation

    NASA Technical Reports Server (NTRS)

    Stringfellow, Guy

    2004-01-01

    This program intended to test whether the lowest mass stars at the bottom end of the main sequence and the lower mass brown dwarfs have coronae. If they have coronae, what are the coronal characteristics and what drives them? In the classical dynamo picture, the closed magnetic loop structure is generated near the boundary of the convective envelope and the radiative core. Stars with mass below 0.30 Msun however are fully convective, and the nature of the dynamo responsible for the generation of the coronae in this regime is poorly understood. Previous results from the ROSAT mission (e.g., Fleming et al. 1993, 1995; Schmitt et al. 1995) had confirmed three very important characteristics of M-star coronae: (1) a very high percentage of all M dwarfs have coronae (of order 85% in the local 7 pc sample), (2) those M dwarfs showing high chromospheric activity, such as having the Balmer series in emission or large/numerous optical flaring, indeed exhibit the highest coronal activity, and (3) that the maximum saturation boundary in X-ray luminosity, which amounts to 0.0001-0.001 for Lx/Lbol for the dMe stars, extends down to the current detection limit, through spectral types M7. It was likely that the incompleteness noted for result (1) above was simply a detection limit problem; for more distant sources, the X-ray fainter dM stars will drop below detection thresholds before the more X-ray luminous dMe stars. The latest stars for which direct detection of the corona had been successful were of spectral type dM7 (e.g., VB8, LHS 3003). This program proposed to obtain ROSAT HRI observations for a large number of the coolest known (at that time) stars at the bottom of the main-sequence, which had spectral types of M9 or later. Three stars were approved for observations with ROSAT-HRI totaling 180 ksec. The goal was to obtain X-ray detections or low upper limits for the three approved stars.

  5. Archaeological Evidence for Peach (Prunus persica) Cultivation and Domestication in China

    PubMed Central

    Zheng, Yunfei; Crawford, Gary W.; Chen, Xugao

    2014-01-01

    The cultivated/domesticated peach (Prunus persica var. persica; Rosaceae, subgenus Amygdalus; synonym: Amygdalus persica) originated in China, but its wild ancestor, as well as where, when, and under what circumstances the peach was domesticated, is poorly known. Five populations of archaeological peach stones recovered from Zhejiang Province, China, document peach use and evolution beginning ca. 8000 BP. The majority of the archaeological sites from which the earliest peach stones have been recovered are from the Yangzi River valley, indicating that this is where early selection for favorable peach varieties likely took place. Furthermore, peach stone morphology through time is consistent with the hypothesis that an unknown wild P. persica was the ancestor of the cultivated peach. The oldest archaeological peach stones are from the Kuahuqiao (8000–7000 BP) and Tianluoshan (7000–6500 BP) sites and both stone samples segregate into two size groups, suggesting early selection of preferred types. The first peach stones in China most similar to modern cultivated forms are from the Liangzhu culture (ca. 5300 to 4300 BP), where the peach stones are significantly larger and more compressed than earlier stones. Similar peach stones are reported from Japan much earlier (6700–6400 BP). This large, compressed-stone peach was introduced to Japan and indicates a yet unidentified source population in China that was similar to the Liangzhu culture peach. This study proposes that the lower Yangzi River valley is a region, if not the region, of early peach selection and domestication and that the process began at least 7500 years ago. PMID:25192436

  6. Archaeological evidence for peach (Prunus persica) cultivation and domestication in China.

    PubMed

    Zheng, Yunfei; Crawford, Gary W; Chen, Xugao

    2014-01-01

    The cultivated/domesticated peach (Prunus persica var. persica; Rosaceae, subgenus Amygdalus; synonym: Amygdalus persica) originated in China, but its wild ancestor, as well as where, when, and under what circumstances the peach was domesticated, is poorly known. Five populations of archaeological peach stones recovered from Zhejiang Province, China, document peach use and evolution beginning ca. 8000 BP. The majority of the archaeological sites from which the earliest peach stones have been recovered are from the Yangzi River valley, indicating that this is where early selection for favorable peach varieties likely took place. Furthermore, peach stone morphology through time is consistent with the hypothesis that an unknown wild P. persica was the ancestor of the cultivated peach. The oldest archaeological peach stones are from the Kuahuqiao (8000-7000 BP) and Tianluoshan (7000-6500 BP) sites and both stone samples segregate into two size groups, suggesting early selection of preferred types. The first peach stones in China most similar to modern cultivated forms are from the Liangzhu culture (ca. 5300 to 4300 BP), where the peach stones are significantly larger and more compressed than earlier stones. Similar peach stones are reported from Japan much earlier (6700-6400 BP). This large, compressed-stone peach was introduced to Japan and indicates a yet unidentified source population in China that was similar to the Liangzhu culture peach. This study proposes that the lower Yangzi River valley is a region, if not the region, of early peach selection and domestication and that the process began at least 7500 years ago.

  7. Cold acclimation in genetically related (sibling) deciduous and evergreen peach (Prunus persica [L.] Batsch). II. A 60-kilodalton bark protein in cold-acclimated tissues of peach is heat stable and related to the dehydrin family of proteins.

    PubMed

    Arora, R; Wisniewski, M E

    1994-05-01

    In several plant species, certain cold-regulated proteins share unique properties. These proteins are (a) heat stable and (b) hydrophilic and are related to the Group 2 late embryogenesis abundant or dehydrin family of proteins. Our previous work with sibling deciduous and evergreen peach genotypes demonstrated a correlation between the level of accumulation of certain bark proteins and cold-acclimation potential of these tissues. Here we identify a 60-kD bark protein in peach (Prunus persica [L.] Batsch), PCA60 ("peach cold acclimation"), that is accumulated during cold acclimation and is heat stable. Immunological studies indicated that this protein is related to the dehydrin family of proteins and accumulates at much higher levels in the bark tissues of the deciduous genotype than in the evergreen. Amino acid composition indicated that the 60-kD protein has a compositional bias for glycine (24%), glutamic acid/glutamine (11.4%), aspartic acid/asparagine (10%), and threonine (9.6%), contains relatively low levels of aromatic amino acids (phenylalanine and tyrosine), and is rich in hydrophilic amino acids. A novel characteristic of the 60-kD cold-acclimation protein is the presence of a repeating nine-amino acid sequence. A five-amino acid stretch, which is included within this repeating motif, shares striking homology with other cold-regulated proteins and dehydrins.

  8. Cold acclimation in genetically related (sibling) deciduous and evergreen peach (Prunus persica [L.] Batsch). II. A 60-kilodalton bark protein in cold-acclimated tissues of peach is heat stable and related to the dehydrin family of proteins.

    PubMed Central

    Arora, R; Wisniewski, M E

    1994-01-01

    In several plant species, certain cold-regulated proteins share unique properties. These proteins are (a) heat stable and (b) hydrophilic and are related to the Group 2 late embryogenesis abundant or dehydrin family of proteins. Our previous work with sibling deciduous and evergreen peach genotypes demonstrated a correlation between the level of accumulation of certain bark proteins and cold-acclimation potential of these tissues. Here we identify a 60-kD bark protein in peach (Prunus persica [L.] Batsch), PCA60 ("peach cold acclimation"), that is accumulated during cold acclimation and is heat stable. Immunological studies indicated that this protein is related to the dehydrin family of proteins and accumulates at much higher levels in the bark tissues of the deciduous genotype than in the evergreen. Amino acid composition indicated that the 60-kD protein has a compositional bias for glycine (24%), glutamic acid/glutamine (11.4%), aspartic acid/asparagine (10%), and threonine (9.6%), contains relatively low levels of aromatic amino acids (phenylalanine and tyrosine), and is rich in hydrophilic amino acids. A novel characteristic of the 60-kD cold-acclimation protein is the presence of a repeating nine-amino acid sequence. A five-amino acid stretch, which is included within this repeating motif, shares striking homology with other cold-regulated proteins and dehydrins. PMID:8029367

  9. Nematodes Attacking Cultivars of Peach in North Carolina

    PubMed Central

    Barker, K. R.; Clayton, C. N.

    1973-01-01

    Criconemoides xenoplax and Meloidogyne incognita were the nematode species most frequently associated with peach in North Carolina. Other nematodes often found in high numbers on that crop were Pratylenehus vulnus, Helicotylenchus spp., Trichodorus christiei, Xiphinema amerieanum and Tylenchorhynchus claytoni. P. vulnus and P. penetrans reproduced well on rootstocks of 21 peach cultivars tested in the greenhouse. P. zeae, P. brachyurus, P. coffeae and P. scribneri decreased or increased only slightly in most instances. C. xenoplax increased as much as 330-fold and reproduced on all cultivars tested. In a field experiment with six peach cultivars and moderate numbers of P. brachyurus, P. vulnus, C. xenoplax, and M. incognita, only M. incognita caused significant stunting in 30 months. This nematode increased only on root-knot susceptible cultivars, whereas the other nematodes followed the same patterns observed in the greenhouse. In a second field experiment, seedlings were stunted significantly by high numbers of C. xenoplax during an 18-month period. PMID:19319348

  10. Genomic characterization of putative allergen genes in peach/almond and their synteny with apple

    PubMed Central

    Chen, Lin; Zhang, Shuiming; Illa, Eudald; Song, Lijuan; Wu, Shandong; Howad, Werner; Arús, Pere; Weg, Eric van de; Chen, Kunsong; Gao, Zhongshan

    2008-01-01

    Background Fruits from several species of the Rosaceae family are reported to cause allergic reactions in certain populations. The allergens identified belong to mainly four protein families: pathogenesis related 10 proteins, thaumatin-like proteins, lipid transfer proteins and profilins. These families of putative allergen genes in apple (Mal d 1 to 4) have been mapped on linkage maps and subsequent genetic study on allelic diversity and hypoallergenic traits has been carried out recently. In peach (Prunus persica), these allergen gene families are denoted as Pru p 1 to 4 and for almond (Prunus dulcis)Pru du 1 to 4. Genetic analysis using current molecular tools may be helpful to establish the cause of allergenicity differences observed among different peach cultivars. This study was to characterize putative peach allergen genes for their genomic sequences and linkage map positions, and to compare them with previously characterized homologous genes in apple (Malus domestica). Results Eight Pru p/du 1 genes were identified, four of which were new. All the Pru p/du 1 genes were mapped in a single bin on the top of linkage group 1 (G1). Five Pru p/du 2 genes were mapped on four different linkage groups, two very similar Pru p/du 2.01 genes (A and B) were on G3, Pru p/du 2.02 on G7,Pru p/du 2.03 on G8 and Pru p/du 2.04 on G1. There were differences in the intron and exon structure in these Pru p/du 2 genes and in their amino acid composition. Three Pru p/du 3 genes (3.01–3.03) containing an intron and a mini exon of 10 nt were mapped in a cluster on G6. Two Pru p/du 4 genes (Pru p/du 4.01 and 4.02) were located on G1 and G7, respectively. The Pru p/du 1 cluster on G1 aligned to the Mal d 1 clusters on LG16; Pru p/du 2.01A and B on G3 to Mal d 2.01A and B on LG9; the Pru p/du 3 cluster on G6 to Mal d 3.01 on LG12; Pru p/du 4.01 on G1 to Mal d 4.03 on LG2; and Pru p/du 4.02 on G7 to Mal d 4.02 on LG2. Conclusion A total of 18 putative peach/almond allergen genes have

  11. Isolation and expression analysis of four HD-ZIP III family genes targeted by microRNA166 in peach.

    PubMed

    Zhang, C H; Zhang, B B; Ma, R J; Yu, M L; Guo, S L; Guo, L

    2015-10-30

    MicroRNA166 (miR166) is known to have highly conserved targets that encode proteins of the class III homeodomain-leucine zipper (HD-ZIP III) family, in a broad range of plant species. To further understand the relationship between HD-ZIP III genes and miR166, four HD-ZIP III family genes (PpHB14, PpHB15, PpHB8, and PpREV) were isolated from peach (Prunus persica) tissue and characterized. Spatio-temporal expression profiles of the genes were analyzed. Genes of the peach HD-ZIP III family were predicted to encode five conserved domains. Deduced amino acid sequences and tertiary structures of the four peach HD-ZIP III genes were highly conserved, with corresponding genes in Arabidopsis thaliana. The expression level of four targets displayed the opposite trend to that of miR166 throughout fruit development, with the exception of PpHB14 from 35 to 55 days after full bloom (DAFB). This finding indicates that miR166 may negatively regulate its four targets throughout fruit development. As for leaf and phloem, the same trend in expression level was observed between four targets and miR166 from 75 to 105 DAFB. However, the opposite trend was observed for the transcript level between four targets and miR166 from 35 to 55 DAFB. miRNA166 may negatively regulate four targets in some but not all developmental stages for a given tissue. The four genes studied were observed to have, exactly or generally, the same change tendency as individual tissue development, a finding that suggests genes of the HD-ZIP III family in peach may have complementary or cooperative functions in various tissues.

  12. Identification and characterization of endophytic bacteria isolated from in vitro cultures of peach and pear rootstocks.

    PubMed

    Liaqat, Fakhra; Eltem, Rengin

    2016-12-01

    Endophytes are microorganisms which live symbiotically with almost all varieties of plant and in turn helping the plant in a number of ways. Instead of satisfactory surface sterilization approaches, repeatedly occurring bacterial growth on in vitro rootstock cultures of peach and pear was identified and isolated as endophytic bacteria in our present study. Five different isolates from peach rootstocks were molecularly identified by 16S rRNA gene sequencing as Brevundimonas diminuta, Leifsonia shinshuensis, Sphingomonas parapaucimobilis Brevundimonas vesicularis, Agrobacterium tumefaciens while two endophytic isolates of pear were identified as Pseudoxanthomonas mexicana, and Stenotrophomonas rhizophilia. Identified endophytes were also screened for their potential of plant growth promotion according to indoleacetic acid (IAA) production, nitrogen fixation, solubilization of phosphate and production of siderophore. All seven endophytic isolates have shown positive results for IAA, nitrogen fixation and phosphate solubilization tests. However, two out of seven isolates showed positive results for siderophore production. On the basis of these growth promoting competences, isolated endophytes can be presumed to have significant influence on the growth of host plants. Future studies required to determine the antimicrobial susceptibility profile and potential application of these isolates in biological control, microbial biofertilizers and degradative enzyme production.

  13. Dormancy-associated MADS genes from the EVG locus of peach [Prunus persica (L.) Batsch] have distinct seasonal and photoperiodic expression patterns

    PubMed Central

    Li, Zhigang; Reighard, Gregory Lynn; Abbott, Albert Glenn; Bielenberg, Douglas Gary

    2009-01-01

    Mapping and sequencing of the non-dormant evg mutant in peach [Prunus persica (L.) Batsch] identified six tandem-arrayed DAM (dormancy-associated MADS-box) genes as candidates for regulating growth cessation and terminal bud formation. To narrow the list of candidate genes, an attempt was made to associate bud phenology with the seasonal and environmental patterns of expression of the candidates in wild-type trees. The expression of the six peach DAM genes at the EVG locus of peach was characterized throughout an annual growing cycle in the field, and under controlled conditions in response to a long day–short day photoperiod transition. DAM1, 2, 4, 5, and 6 were responsive to a reduction in photoperiod in controlled conditions and the direction of response correlated with the seasonal timing of expression in field-grown trees. DAM3 did not respond to photoperiod and may be regulated by chilling temperatures. The DAM genes in peach appear to have at least four distinct patterns of expression. DAM1, 2, and 4 are temporally associated with seasonal elongation cessation and bud formation and are the most likely candidates for control of the evg phenotype. PMID:19553369

  14. Dormancy-associated MADS genes from the EVG locus of peach [Prunus persica (L.) Batsch] have distinct seasonal and photoperiodic expression patterns.

    PubMed

    Li, Zhigang; Reighard, Gregory Lynn; Abbott, Albert Glenn; Bielenberg, Douglas Gary

    2009-01-01

    Mapping and sequencing of the non-dormant evg mutant in peach [Prunus persica (L.) Batsch] identified six tandem-arrayed DAM (dormancy-associated MADS-box) genes as candidates for regulating growth cessation and terminal bud formation. To narrow the list of candidate genes, an attempt was made to associate bud phenology with the seasonal and environmental patterns of expression of the candidates in wild-type trees. The expression of the six peach DAM genes at the EVG locus of peach was characterized throughout an annual growing cycle in the field, and under controlled conditions in response to a long day-short day photoperiod transition. DAM1, 2, 4, 5, and 6 were responsive to a reduction in photoperiod in controlled conditions and the direction of response correlated with the seasonal timing of expression in field-grown trees. DAM3 did not respond to photoperiod and may be regulated by chilling temperatures. The DAM genes in peach appear to have at least four distinct patterns of expression. DAM1, 2, and 4 are temporally associated with seasonal elongation cessation and bud formation and are the most likely candidates for control of the evg phenotype.

  15. Microsatellite genetic linkage maps of myrobalan plum and an almond-peach hybrid--location of root-knot nematode resistance genes.

    PubMed

    Dirlewanger, E; Cosson, P; Howad, W; Capdeville, G; Bosselut, N; Claverie, M; Voisin, R; Poizat, C; Lafargue, B; Baron, O; Laigret, F; Kleinhentz, M; Arús, P; Esmenjaud, D

    2004-08-01

    Inheritance and linkage studies were carried out with microsatellite [or simple sequence repeat (SSR)] markers in a F(1) progeny including 101 individuals of a cross between Myrobalan plum ( Prunus cerasifera Ehrh) clone P.2175 and the almond (Prunus dulcis Mill.)-peach ( Prunus persica L. Batsch) hybrid clone GN22 ["Garfi" (G) almond x "Nemared" (N) peach]. This three-way interspecific Prunus progeny was produced in order to associate high root-knot nematode (RKN) resistances from Myrobalan and peach with other favorable traits for Prunus rootstocks from plum, peach and almond. The RKN resistance genes, Ma from the Myrobalan plum clone P.2175 and R(MiaNem) from the 'N' peach, are each heterozygous in the parents P.2175 and GN22, respectively. Two hundred and seventy seven Prunus SSRs were tested for their polymorphism. One genetic map was constructed for each parent according to the "double pseudo-testcross" analysis model. The Ma gene and 93 markers [two sequence characterized amplified regions (SCARs), 91 SSRs] were placed on the P.2175 Myrobalan map covering 524.8 cM. The R(MiaNem) gene, the Gr gene controlling the color of peach leaves, and 166 markers (one SCAR, 165 SSRs) were mapped to seven linkage groups instead of the expected eight in Prunus. Markers belonging to groups 6 and 8 in previous maps formed a single group in the GN22 map. A reciprocal translocation, already reported in a G x N F(2), was detected near the Gr gene. By separating markers from linkage groups 6 and 8 from the GN22 map, it was possible to compare the eight homologous linkage groups between the two maps using the 68 SSR markers heterozygous in both parents (anchor loci). All but one of these 68 anchor markers are in the same order in the Myrobalan plum map and in the almond-peach map, as expected from the high level of synteny within Prunus. The Ma and R(MiaNem)genes confirmed their previous location in the Myrobalan linkage group 7 and in the GN22 linkage group 2, respectively

  16. A strategy for male sterility facilitated recurrent selection in peach

    USDA-ARS?s Scientific Manuscript database

    Commercial peach is a highly homozygous self-compatible species with limited diversity. The incorporation of exotic germplasm and breeding of new varieties is hindered by the labor required to generate large segregating populations. Hand pollinations are characterized by a high failure rate with onl...

  17. Fighting Sharka in Peach: Current Limitations and Future Perspectives

    PubMed Central

    Cirilli, Marco; Geuna, Filippo; Babini, Anna R.; Bozhkova, Valentina; Catalano, Luigi; Cavagna, Beniamino; Dallot, Sylvie; Decroocq, Véronique; Dondini, Luca; Foschi, Stefano; Ilardi, Vincenza; Liverani, Alessandro; Mezzetti, Bruno; Minafra, Angelantonio; Pancaldi, Marco; Pandolfini, Tiziana; Pascal, Thierry; Savino, Vito N.; Scorza, Ralph; Verde, Ignazio; Bassi, Daniele

    2016-01-01

    Sharka, caused by Plum Pox Virus (PPV), is by far the most important infectious disease of peach [P. persica (L.) Batsch] and other Prunus species. The progressive spread of the virus in many important growing areas throughout Europe poses serious issues to the economic sustainability of stone fruit crops, peach in particular. The adoption of internationally agreed-upon rules for diagnostic tests, strain-specific monitoring schemes and spatial–temporal modeling of virus spread, are all essential for a more effective sharka containment. The EU regulations on nursery activity should be modified based on the zone delimitation of PPV presence, limiting open-field production of propagation materials only to virus-free areas. Increasing the efficiency of preventive measures should be augmented by the short-term development of resistant cultivars. Putative sources of resistance/tolerance have been recently identified in peach germplasm, although the majority of novel resistant sources to PPV-M have been found in almond. However, the complexity of introgression from related-species imposes the search for alternative strategies. The use of genetic engineering, particularly RNA interference (RNAi)-based approaches, appears as one of the most promising perspectives to introduce a durable resistance to PPV in peach germplasm, notwithstanding the well-known difficulties of in vitro plant regeneration in this species. In this regard, rootstock transformation to induce RNAi-mediated systemic resistance would avoid the transformation of numerous commercial cultivars, and may alleviate consumer resistance to the use of GM plants. PMID:27625664

  18. 78 FR 3877 - Radio Broadcasting Services; Peach Springs, AZ

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-01-17

    ... COMMISSION 47 CFR Part 73 Radio Broadcasting Services; Peach Springs, AZ AGENCY: Federal Communications... filing procedures for comments, see 47 CFR 1.415 and 1.420. List of Subjects in 47 CFR Part 73 Radio, Radio broadcasting. Federal Communications Commission. Nazifa Sawez, Assistant Chief, Audio...

  19. 75 FR 3694 - Radio Broadcasting Services, Peach Springs, Arizona

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-01-22

    ... COMMISSION 47 CFR Part 73 Radio Broadcasting Services, Peach Springs, Arizona AGENCY: Federal Communications... procedures for comments, see 47 CFR 1.4125 and 1.420. List of Subjects in 47 CFR Part 73 Radio, Radio... amend 47 CFR part 73 as follows: PART 73--RADIO BROADCAST SERVICES 1. The authority citation for part...

  20. 78 FR 25861 - Radio Broadcasting Services; Peach Springs, Arizona

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-05-03

    ... COMMISSION 47 CFR Part 73 Radio Broadcasting Services; Peach Springs, Arizona AGENCY: Federal Communications....S.C. 801(a)(1)(A). List of Subjects in 47 CFR Part 73 Radio, Radio broadcasting. Federal...--RADIO BROADCAST SERVICES 0 1. The authority citation for Part 73 continues to read as follows:...

  1. 75 FR 76293 - Radio Broadcasting Services; Peach Springs, AZ

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-12-08

    ... COMMISSION 47 CFR Part 73 Radio Broadcasting Services; Peach Springs, AZ AGENCY: Federal Communications... CFR Part 73 Radio, Radio broadcasting. 0 As stated in the preamble, the Federal Communications Commission amends 47 CFR part 73 as follows: PART 73--RADIO BROADCAST SERVICES 0 1. The authority...

  2. Host status of selected peach rootstocks to Meloidogyne mayaguensis

    USDA-ARS?s Scientific Manuscript database

    Flordaguard, Guardian, Halford, Lovell, Nemaguard, and Okinawa peach rootstocks were evaluated for their susceptibility to Meloidogyne mayaguensis in the greenhouse. All rootstocks were rated as poor hosts of M. mayaguensis. Lovell generally supported greater numbers of M. mayaguensis eggs per pla...

  3. Fighting Sharka in Peach: Current Limitations and Future Perspectives.

    PubMed

    Cirilli, Marco; Geuna, Filippo; Babini, Anna R; Bozhkova, Valentina; Catalano, Luigi; Cavagna, Beniamino; Dallot, Sylvie; Decroocq, Véronique; Dondini, Luca; Foschi, Stefano; Ilardi, Vincenza; Liverani, Alessandro; Mezzetti, Bruno; Minafra, Angelantonio; Pancaldi, Marco; Pandolfini, Tiziana; Pascal, Thierry; Savino, Vito N; Scorza, Ralph; Verde, Ignazio; Bassi, Daniele

    2016-01-01

    Sharka, caused by Plum Pox Virus (PPV), is by far the most important infectious disease of peach [P. persica (L.) Batsch] and other Prunus species. The progressive spread of the virus in many important growing areas throughout Europe poses serious issues to the economic sustainability of stone fruit crops, peach in particular. The adoption of internationally agreed-upon rules for diagnostic tests, strain-specific monitoring schemes and spatial-temporal modeling of virus spread, are all essential for a more effective sharka containment. The EU regulations on nursery activity should be modified based on the zone delimitation of PPV presence, limiting open-field production of propagation materials only to virus-free areas. Increasing the efficiency of preventive measures should be augmented by the short-term development of resistant cultivars. Putative sources of resistance/tolerance have been recently identified in peach germplasm, although the majority of novel resistant sources to PPV-M have been found in almond. However, the complexity of introgression from related-species imposes the search for alternative strategies. The use of genetic engineering, particularly RNA interference (RNAi)-based approaches, appears as one of the most promising perspectives to introduce a durable resistance to PPV in peach germplasm, notwithstanding the well-known difficulties of in vitro plant regeneration in this species. In this regard, rootstock transformation to induce RNAi-mediated systemic resistance would avoid the transformation of numerous commercial cultivars, and may alleviate consumer resistance to the use of GM plants.

  4. Cutaneous myelolipoma in a peach-faced lovebird (Agapornis roseicollis).

    PubMed

    Ozakt, K; Kinoshita, H; Kurasho, H; Narama, I

    1996-03-01

    A case of cutaneous myelolipoma in a 2.5-year-old female peach-faced lovebird is reported. Histopathologically, the subcutaneous mass on the tip of the left wing consisted of well circumscribed adipose tissue containing several aggregates of * haematopoietic cells. Heterophilic differentiation was most prominent in them.

  5. 21 CFR 145.171 - Artificially sweetened canned peaches.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Artificially sweetened canned peaches. 145.171 Section 145.171 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION CANNED FRUITS Requirements for Specific Standardized Canned...

  6. 21 CFR 145.171 - Artificially sweetened canned peaches.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 2 2011-04-01 2011-04-01 false Artificially sweetened canned peaches. 145.171 Section 145.171 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR HUMAN CONSUMPTION CANNED FRUITS Requirements for Specific Standardized Canned...

  7. Blossom thinning in apple and peach with an essential oil

    USDA-ARS?s Scientific Manuscript database

    The essential oil, eugenol, and a eugenol based herbicide (Matran EC) were applied to apple and peach trees during bloom to evaluate the thinning effect of these materials. Several additional bloom thinners including ammonium thiosulfate (ATS), liquid lime sulfur, and sulfcarbamide were included in...

  8. Deficit irrigation of peach trees to reduce water consumption

    USDA-ARS?s Scientific Manuscript database

    Lack of water is a major limiting factor for production tree fruits such as peaches in the San Joaquin Valley of California and many other arid- or semi-arid regions in the world. Deficit irrigation can be used in some cropping systems as a water resource management strategy to reduce non-productiv...

  9. Moderate chill peach variety development for the Southeastern United States

    USDA-ARS?s Scientific Manuscript database

    The Southeastern U.S. peach industry is concentrated in two production areas, i.e. Central Georgia/South Carolina (high chill, main season) and the Lower Coastal Plain (moderate chill, early season) along the Gulf coast. These two areas have distinctly different climates, and consequently, require ...

  10. Comparative proteomic analysis of floral color variegation in peach.

    PubMed

    Zhou, Yong; Wu, Xinxin; Zhang, Zhen; Gao, Zhihong

    2015-09-04

    Variegation in flower is a special trait in ornamental peach (Prunus persica L.). To investigate the mechanism of color variegation, we used a combination of two dimensional gel electrophoresis and mass spectrometry to explore the proteomic profiles between variegated flower (VF) and red flower (RF) buds of the peach cultivar 'Sahong Tao'. More than 500 highly reproducible protein spots (P < 0.05) were detected and 72 protein spots showed a greater than two-fold difference in their values. We identified 70 proteins that may play roles in petal coloration. The mRNA levels of the corresponding genes were detected using quantitative RT-PCR. The results show that most of the proteins are involved in energy and metabolism, which provide energy and substrates. We found that LDOX, WD40, ACC, and PPO II are related to the pigment biosynthetic pathway. The activity of PPO enzyme was further validated and showed the higher with significant differences in RF compared with the VF ones. Moreover, the four UCH proteins are involved in protein fate and may be important in post-translational modifications in peach flowers. Our study is the first comparative proteomic analysis of floral variegation and will contribute to further investigations into the molecular mechanism of flower petal coloration in ornamental peach. Copyright © 2015 Elsevier Inc. All rights reserved.

  11. Water use dynamics of peach trees under postharvest deficit irrigation

    USDA-ARS?s Scientific Manuscript database

    Postharvest deficit irrigation is a potential strategy for conserving valuable fresh water for production of early season tree fruit crops such as peaches. However, behaviors of evapotranspiration characteristics and crop coefficient (Kc) under deficit irrigation conditions are largely unknown. A th...

  12. INFRARED CANOPY TEMPERATURE OF PEACH TREES UNDER DEFICIT IRRIGATION

    USDA-ARS?s Scientific Manuscript database

    An early-season peach, “Crimson Lady” (Prunus persica (L.) Batsch), is generally harvested in late May to early June in central California. To reduce water use, regulated deficit irrigation may be applied to these trees for the remaining and also most water demanding season (mid June to November). ...

  13. Blossom thinning in apple and peach with an essential oil

    USDA-ARS?s Scientific Manuscript database

    A series of experiments were conducted with apple (Malus xdomestica) and peach [Prunus persica (L.) Batsch] from 2003-2008 to evaluate the flower thinning efficacy of eugenol and a eugenol-based essential oil. Flower thinning effects by hand defoliation and alternative chemical agents were compared...

  14. MP-29, a clonal interspecific hybrid rootstock for peach

    USDA-ARS?s Scientific Manuscript database

    MP-29 rootstock has been jointly released for grower trial by the U.S. Department of Agriculture, Agricultural Research Service (Byron, GA) and Florida Agricultural Experiment Station. MP-29 is suggested for trial as a rootstock for peach (Prunus persica L. Batsch) varieties on Armillaria root rot ...

  15. Increasing chilling reduces heat requirement for floral budbreak in peach

    USDA-ARS?s Scientific Manuscript database

    Response to chilling temperatures is a critical factor in the suitability of peach [Prunus persica (L.) Batsch] cultivars to moderate climates such as in the southeastern United States. Time of bloom depends on the innate chilling requirement of the cultivar as well as the timing and quantity of co...

  16. Transcriptome Analysis of Green Peach Aphid (Myzus persicae): Insight into Developmental Regulation and Inter-Species Divergence

    PubMed Central

    Ji, Rui; Wang, Yujun; Cheng, Yanbin; Zhang, Meiping; Zhang, Hong-Bin; Zhu, Li; Fang, Jichao; Zhu-Salzman, Keyan

    2016-01-01

    Green peach aphid (Myzus persicae) and pea aphid (Acyrthosiphon pisum) are two phylogenetically closely related agricultural pests. While pea aphid is restricted to Fabaceae, green peach aphid feeds on hundreds of plant species from more than 40 families. Transcriptome comparison could shed light on the genetic factors underlying the difference in host range between the two species. Furthermore, a large scale study contrasting gene expression between immature nymphs and fully developed adult aphids would fill a previous knowledge gap. Here, we obtained transcriptomic sequences of green peach aphid nymphs and adults, respectively, using Illumina sequencing technology. A total of 2244 genes were found to be differentially expressed between the two developmental stages, many of which were associated with detoxification, hormone production, cuticle formation, metabolism, food digestion, and absorption. When searched against publically available pea aphid mRNA sequences, 13,752 unigenes were found to have no homologous counterparts. Interestingly, many of these unigenes that could be annotated in other databases were involved in the “xenobiotics biodegradation and metabolism” pathway, suggesting the two aphids differ in their adaptation to secondary metabolites of host plants. Conversely, 3989 orthologous gene pairs between the two species were subjected to calculations of synonymous and nonsynonymous substitutions, and 148 of the genes potentially evolved in response to positive selection. Some of these genes were predicted to be associated with insect-plant interactions. Our study has revealed certain molecular events related to aphid development, and provided some insight into biological variations in two aphid species, possibly as a result of host plant adaptation. PMID:27812361

  17. Transcriptome Analysis of Green Peach Aphid (Myzus persicae): Insight into Developmental Regulation and Inter-Species Divergence.

    PubMed

    Ji, Rui; Wang, Yujun; Cheng, Yanbin; Zhang, Meiping; Zhang, Hong-Bin; Zhu, Li; Fang, Jichao; Zhu-Salzman, Keyan

    2016-01-01

    Green peach aphid (Myzus persicae) and pea aphid (Acyrthosiphon pisum) are two phylogenetically closely related agricultural pests. While pea aphid is restricted to Fabaceae, green peach aphid feeds on hundreds of plant species from more than 40 families. Transcriptome comparison could shed light on the genetic factors underlying the difference in host range between the two species. Furthermore, a large scale study contrasting gene expression between immature nymphs and fully developed adult aphids would fill a previous knowledge gap. Here, we obtained transcriptomic sequences of green peach aphid nymphs and adults, respectively, using Illumina sequencing technology. A total of 2244 genes were found to be differentially expressed between the two developmental stages, many of which were associated with detoxification, hormone production, cuticle formation, metabolism, food digestion, and absorption. When searched against publically available pea aphid mRNA sequences, 13,752 unigenes were found to have no homologous counterparts. Interestingly, many of these unigenes that could be annotated in other databases were involved in the "xenobiotics biodegradation and metabolism" pathway, suggesting the two aphids differ in their adaptation to secondary metabolites of host plants. Conversely, 3989 orthologous gene pairs between the two species were subjected to calculations of synonymous and nonsynonymous substitutions, and 148 of the genes potentially evolved in response to positive selection. Some of these genes were predicted to be associated with insect-plant interactions. Our study has revealed certain molecular events related to aphid development, and provided some insight into biological variations in two aphid species, possibly as a result of host plant adaptation.

  18. Cloning and functional analysis of 9-cis-epoxycarotenoid dioxygenase (NCED) genes encoding a key enzyme during abscisic acid biosynthesis from peach and grape fruits.

    PubMed

    Zhang, Mei; Leng, Ping; Zhang, Guanglian; Li, Xiangxin

    2009-08-15

    Ripening and senescence are generally controlled by ethylene in climacteric fruits like peaches, and the ripening process of grape, a non-climacteric fruit, may have some relationship to abscisic acid (ABA) function. In order to better understand the role of ABA in ripening and senescence of these two types of fruits, we cloned the 9-cis-epoxycarotenoid dioxygenase (NCED) gene that encodes a key enzyme in ABA biosynthesis from peaches and grapes using an RT-PCR approach. The NCED gene fragments were cloned from peaches (PpNCED1and PpNCED2, each 740bp) and grapes (VVNCED1, 741bp) using degenerate primers designed based on the conserved amino acids sequence of NCEDs in other plants. PpNCED1 showed 78.54% homology with PpNCED2, 74.90% homology with VVNCED1, and both showed high homology to NCEDs from other plants. The expression patterns of PpNCED1 and VVNCED1 were very similar. Both were highly expressed at the beginning of ripening when ABA content becomes high. The maximum ABA preceded ethylene production in peach fruit. ABA in the grape gradually increased from the beginning of ripening and reached the highest level at 20d before the harvest stage. However, ethylene remained at low levels during the entire process of fruit development, including ripening and senescence. ABA content, and ripening and softening of both types of fruits, were promoted or delayed by exogenous ABA or Fluridone (or NDGA) treatment. The roles of ABA and ethylene in the later ripening of fruit are complex. Based on results obtained in this study, we concluded that PpNCED1 and VVNCED1 initiate ABA biosynthesis at the beginning of fruit ripening, and that ABA accumulation might play a key role in the regulation of ripeness and senescence of both peach and grape fruits.

  19. Charmed Bottom Baryon Spectroscopy

    SciTech Connect

    Brown, Zachary S; Detmold, William; Meinel, Stefan; Orginos, Kostas

    2014-11-01

    The spectrum of doubly and triply heavy baryons remains experimentally unexplored to a large extent. Although the detection of such heavy particle states may lie beyond the reach of exper- iments for some time, it is interesting compute this spectrum from QCD and compare results between lattice calculations and continuum theoretical models. Several lattice calculations ex- ist for both doubly and triply charmed as well as doubly and triply bottom baryons. Here, we present preliminary results from the first lattice calculation of doubly and triply heavy baryons including both charm and bottom quarks. We use domain wall fermions for 2+1 flavors (up down and strange) of sea and valence quarks, a relativistic heavy quark action for the charm quarks, and non-relativistic QCD for the heavier bottom quarks. We present preliminary results for the ground state spectrum.

  20. Laser bottom hole assembly

    DOEpatents

    Underwood, Lance D; Norton, Ryan J; McKay, Ryan P; Mesnard, David R; Fraze, Jason D; Zediker, Mark S; Faircloth, Brian O

    2014-01-14

    There is provided for laser bottom hole assembly for providing a high power laser beam having greater than 5 kW of power for a laser mechanical drilling process to advance a borehole. This assembly utilizes a reverse Moineau motor type power section and provides a self-regulating system that addresses fluid flows relating to motive force, cooling and removal of cuttings.

  1. Postcolonial Appalachia: Bhabha, Bakhtin, and Diane Gilliam Fisher's "Kettle Bottom"

    ERIC Educational Resources Information Center

    Stevenson, Sheryl

    2006-01-01

    Diane Gilliam Fisher's 2004 award-winning book of poems, "Kettle Bottom," offers students a revealing vantage point for seeing Appalachian regional culture in a postcolonial context. An artful and accessible poetic sequence that was selected as the 2005 summer reading for entering students at Smith College, "Kettle Bottom"…

  2. Analysis of biochemical compounds and differentially expressed genes of the anthocyanin biosynthetic pathway in variegated peach flowers.

    PubMed

    Hassani, D; Liu, H L; Chen, Y N; Wan, Z B; Zhuge, Q; Li, S X

    2015-10-28

    Variegated plants are highly valuable in the floricultural market, yet the genetic mechanism underlying this attractive phenomenon has not been completely elucidated. In this study, we identified and measured different compounds in pink and white flower petals of peach (Prunus persica) by high-performance liquid chromatography and liquid chromatography/mass spectrometry analyses. No cyanidin-based or pelargonidin-based compounds were detected in white petals, but high levels of these compounds were found in pink petals. Additionally, we sequenced and analyzed the expression of six key structural genes in the anthocyanin biosynthesis pathway (CHI, CHS, DFR, F3'H, ANS, and UFGT) in both white and pink petals. Quantitative real-time polymerase chain reaction revealed all six genes to be expressed at greatly reduced levels in white flower petals, relative to pink. No allelic variations were found in the transcribed sequences. However, alignment of transcribed and genomic sequences of the ANS gene detected alternative splicing, resulting in transcripts of 1.071 and 942 bp. Only the longer transcript was observed in white flower petals. Since ANS is the key intermediate enzyme catalyzing the colorless leucopelargonidin and leucocyanidin to substrates required for completion of anthocyanin biosynthesis, the ANS gene is implicated in flower color variegation and should be explored in future studies. This article, together with a previous transcriptome study, elucidates the mechanism underlying peach flower color variegation in terms of the key structural genes involved in anthocyanin biosynthesis.

  3. Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality.

    PubMed

    Vizoso, Paula; Meisel, Lee A; Tittarelli, Andrés; Latorre, Mariano; Saba, Juan; Caroca, Rodrigo; Maldonado, Jonathan; Cambiazo, Veronica; Campos-Vargas, Reinaldo; Gonzalez, Mauricio; Orellana, Ariel; Silva, Herman

    2009-09-10

    Cold storage is used to inhibit peach fruit ripening during shipment to distant markets. However, this cold storage can negatively affect the quality of the fruit when it is ripened, resulting in disorders such as wooliness, browning or leathering. In order to understand the individual and combined biological effects that factors such as cold storage and ripening have on the fruit and fruit quality, we have taken a comparative EST transcript profiling approach to identify genes that are differentially expressed in response to these factors. We sequenced 50,625 Expressed Sequence Tags (ESTs) from peach mesocarp (Prunus persica O'Henry variety) stored at four different postharvest conditions. A total of 10,830 Unigenes (4,169 contigs and 6,661 singletons) were formed by assembling these ESTs. Additionally, a collection of 614 full-length and 1,109 putative full-length cDNA clones within flanking loxP recombination sites was created. Statistically analyzing the EST population, we have identified genes that are differentially expressed during ripening, in response to cold storage or the combined effects of cold storage and ripening. Pair-wise comparisons revealed 197 contigs with at least one significant difference in transcript abundance between at least two conditions. Gene expression profile analyses revealed that the contigs may be classified into 13 different clusters of gene expression patterns. These clusters include groups of contigs that increase or decrease transcript abundance during ripening, in response to cold or ripening plus cold. These analyses have enabled us to statistically identify novel genes and gene clusters that are differentially expressed in response to post-harvest factors such as long-term cold storage, ripening or a combination of these two factors. These differentially expressed genes reveal the complex biological processes that are associated with these factors, as well as a large number of putative gene families that may participate

  4. Comparative EST transcript profiling of peach fruits under different post-harvest conditions reveals candidate genes associated with peach fruit quality

    PubMed Central

    Vizoso, Paula; Meisel, Lee A; Tittarelli, Andrés; Latorre, Mariano; Saba, Juan; Caroca, Rodrigo; Maldonado, Jonathan; Cambiazo, Veronica; Campos-Vargas, Reinaldo; Gonzalez, Mauricio; Orellana, Ariel; Silva, Herman

    2009-01-01

    Background Cold storage is used to inhibit peach fruit ripening during shipment to distant markets. However, this cold storage can negatively affect the quality of the fruit when it is ripened, resulting in disorders such as wooliness, browning or leathering. In order to understand the individual and combined biological effects that factors such as cold storage and ripening have on the fruit and fruit quality, we have taken a comparative EST transcript profiling approach to identify genes that are differentially expressed in response to these factors. Results We sequenced 50,625 Expressed Sequence Tags (ESTs) from peach mesocarp (Prunus persica O'Henry variety) stored at four different postharvest conditions. A total of 10,830 Unigenes (4,169 contigs and 6,661 singletons) were formed by assembling these ESTs. Additionally, a collection of 614 full-length and 1,109 putative full-length cDNA clones within flanking loxP recombination sites was created. Statistically analyzing the EST population, we have identified genes that are differentially expressed during ripening, in response to cold storage or the combined effects of cold storage and ripening. Pair-wise comparisons revealed 197 contigs with at least one significant difference in transcript abundance between at least two conditions. Gene expression profile analyses revealed that the contigs may be classified into 13 different clusters of gene expression patterns. These clusters include groups of contigs that increase or decrease transcript abundance during ripening, in response to cold or ripening plus cold. Conclusion These analyses have enabled us to statistically identify novel genes and gene clusters that are differentially expressed in response to post-harvest factors such as long-term cold storage, ripening or a combination of these two factors. These differentially expressed genes reveal the complex biological processes that are associated with these factors, as well as a large number of putative gene

  5. Discrimination of planting area of white peach based near-infrared spectra and chemometrics methods

    NASA Astrophysics Data System (ADS)

    Fu, Xiaping; Ying, Yibin; Zhou, Ying; Xu, Huirong; Xie, Lijuan; Jiang, Xuesong

    2007-09-01

    White peach is a famous peach variety for its super-quality and high economic benefit. It is originally planted in Yuandong Villiage, Jinhua County, Zhejiang province. By now, it has been planted in many other places in southeast of China. However, peaches from different planting areas have dissimilar quality and taste, which result in different selling price. The objective of this research was to discriminate peaches from different planting areas by using near-infrared (NIR) spectra and chemometrics methods. Diffuse reflectance spectra were collected by a fiber spectrometer in the range of 800-2500 nm. Discriminant analysis (DA), soft independent modeling of class analogy (SIMCA), and discriminant partial least square regression (DPLS) methods were employed to classify the peaches from three planting areas 'Jinhua', 'Wuyi', and 'Yongkang' of Zhejiang province. 360 samples were used in this study, 120 samples per planting area. The classifying correctness were above 92% for both DA and SIMCA mdoels. And the result of DPLS model was slightly better. By using DPLS method, two 'Jinhua' peaches, three 'Wuyi' peaches, and three 'Yongkang' peaches were misclassified, the accruacy was above 95%. The results of this study indicate that the three chemometrics methods DA, SIMCA, and DPLS are effective for discriminating peaches from different planting areas based on NIR spectroscopy.

  6. 48. Bottom of shock absorber, bottom of launch tube, soda ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    48. Bottom of shock absorber, bottom of launch tube, soda bottle liter at right - Ellsworth Air Force Base, Delta Flight, Launch Facility, On County Road T512, south of Exit 116 off I-90, Interior, Jackson County, SD

  7. A brachytic dwarfism trait (dw) in peach trees is caused by a nonsense mutation within the gibberellic acid receptor PpeGID1c.

    PubMed

    Hollender, Courtney A; Hadiarto, Toto; Srinivasan, Chinnathambi; Scorza, Ralph; Dardick, Chris

    2016-04-01

    Little is known about the genetic factors controlling tree size and shape. Here, we studied the genetic basis for a recessive brachytic dwarfism trait (dw) in peach (Prunus persica) that has little or no effect on fruit development. A sequencing-based mapping strategy positioned dw on the distal end of chromosome 6. Further sequence analysis and fine mapping identified a candidate gene for dw as a non-functional allele of the gibberellic acid receptor GID1c. Expression of the two GID1-like genes found in peach, PpeGID1c and PpeGID1b, was analyzed. GID1c was predominantly expressed in actively growing vegetative tissues, whereas GID1b was more highly expressed in reproductive tissues. Silencing of GID1c in plum via transgenic expression of a hairpin construct led to a dwarf phenotype similar to that of dw/dw peaches. In general, the degree of GID1c silencing corresponded to the degree of dwarfing. The results suggest that PpeGID1c serves a primary role in vegetative growth and elongation, whereas GID1b probably functions to regulate gibberellic acid perception in reproductive organs. Modification of GID1c expression could provide a rational approach to control tree size without impairing fruit development. No claim to original US government works New Phytologist © 2015 New Phytologist Trust.

  8. Acceptability of Aloysia citriodora-supplemented peach jams.

    PubMed

    Gámbaro, Adriana; Miraballes, Marcelo; Purtscher, Irene; Deandréis, Inés; Martínez, Mariana

    2015-01-01

    An unsupplemented peach jam and four peach jam samples prepared by supplementing the former with increasing amounts of Aloysia citriodora aqueous extract were subjected to sensory testing. A trained panel of eight assessors initially identified (reaching consensus) the relevant sensory attributes and then rated the jam samples on an individual basis. The jam samples were later evaluated for overall liking and willingness to purchase by a group of 95 interested consumers, who also provided their individual appraisal of the sensory features of the various samples by responding to an open-ended question. Overall, consumers appeared not to accept the sensory modifications introduced in traditional peach jam by the addition of A. citriodora extract, even though they were expressly acquainted with its health benefits. The degree of acceptance of the extract supplement decreased significantly with increasing amounts of extract in the jam. The groups identified to have the least and the greatest tolerance to the sensory modifications introduced in the supplemented jams differed in gender distribution, with male consumers having a greater tolerance than females. © The Author(s) 2013 Reprints and permissions: sagepub.co.uk/journalsPermissions.nav.

  9. Phenolic contents and bioactive potential of peach fruit extracts.

    PubMed

    Mokrani, Abderrahmane; Krisa, Stéphanie; Cluzet, Stéphanie; Da Costa, Grégory; Temsamani, Hamza; Renouf, Elodie; Mérillon, Jean-Michel; Madani, Khodir; Mesnil, Marc; Monvoisin, Arnaud; Richard, Tristan

    2016-07-01

    Several cultivars of peach fruit (Prunus persica L.) were investigated. Their phenolic composition and concentration were assessed by LC-MS. Concentrations were calculated in mg per g of dry weight extract. Their antioxidant capacity (Folin-Ciocalteu, ORAC, DPPH, ABTS, PFRAP and ICA), inhibitory property against β-amyloid and α-synuclein fibril formation and protective capacity against Aβ-induced toxicity on PC12 cell lines (viability assessed by MTT assay and intracellular ROS production by DCFH-DA assay) were evaluated. Fifteen different phenolic compounds were identified and quantified. In particular, new isorhamnetin derivatives were identified. Phenolic contents were ranged between 19 and 82mg/g. Spring Belle extract had the highest content and Romea the lowest. Except for the ICA assay, a good correlation between phenolic content and the antioxidant capacities of peach fruit extracts was found, indicating that phenolic compounds are major contributors to their antioxidant capacity. Results indicate that the phenolic extract of peach cultivars inhibits Aβ and αS fibril formation and protects PC12 cell lines against Aβ-induced toxicity.

  10. The positive effect of skin transpiration in peach fruit growth.

    PubMed

    Morandi, Brunella; Manfrini, Luigi; Losciale, Pasquale; Zibordi, Marco; Corelli-Grappadelli, Luca

    2010-09-01

    The effect of fruit transpiration on the mechanisms driving peach (Prunus persica (L.) Batsch) daily growth was investigated. In peach, fruit water losses increase during the season and might play a key role in determining fruit growth. Skin transpiration was reduced during the cell expansion stage by enclosing fruit in plastic bags fitted with holes. In the first year, diameter changes of bagged and control fruit were precisely monitored for 15 days, and percentage dry matter and soluble solids content were determined during the experiment and at harvest. In the second year, midday fruit water potential, daily patterns of fruit growth and of vascular and transpiration flows were monitored. Bagging reduced fruit daily growth on some days, and negatively affected both fruit dry matter percentage and soluble solids content. Fruit transpiration rate was reduced during the midday hours, thus increasing midday fruit water potential and lowering xylem inflows. In accordance with the Münch hypothesis on traslocation, these conditions likely decreased the necessary gradient needed for the transport of phloem sap to sink organs, as in the afternoon, bagged fruit showed lower phloem inflows. These data suggest that skin transpiration in peach has a positive effect on fruit growth, as it enhances fruit phloem import. Copyright 2010 Elsevier GmbH. All rights reserved.

  11. Carbon and nitrogen partitioning in peach/plum grafts.

    PubMed

    Moing, A; Gaudillère, J P

    1992-01-01

    Modifications in root-shoot relationships induced by graft incompatibility were studied in peach/plum graft combinations by means of carbohydrate and nitrogen analyses and isotope labeling. Mobilization of stored carbon, phloem transport of carbon, and mobilization, assimilation and distribution of nitrogen were studied in one compatible peach/plum graft (Prunus persica L. Batsch cv. springtime grafted on Prunus cerasifera L. Ehrh cv. myrobalan P 2032) and one incompatible graft (Prunus persica L. Batsch cv. Springtime grafted on Prunus cerasifera L. Ehrh cv. myrobalan P 18) for 89 days after grafting. Carbon and nitrogen reserves were mobilized in the rootstock in both graft combinations during the first 78 days following grafting. After that, sorbitol concentration was lower in the roots of the incompatible graft than in the roots of the compatible graft, whereas soluble sugars and starch accumulated in the peach scion of the incompatible graft. In both graft types, carbon was allocated mainly to the scion. Labeling with (13)CO(2) from 78 to 81 days after grafting showed that carbon partitioning among the different plant organs was only slightly affected by graft incompatibility. Carbohydrate concentrations provided indirect evidence that carbon transfer to the roots was hindered in the incompatible graft. Labeling with (15)NO(3) showed that nitrogen distribution and the rate of nitrogen assimilation were similar in the two graft combinations from 57 to 78 days after grafting. Nitrogen assimilation in the incompatible graft ceased 78 days after grafting, whereas it continued in the compatible graft.

  12. Proteomic analysis of peach fruit moth larvae treated with phosphine.

    PubMed

    Liu, Tao; Li, Li; Li, Baishu; Zhang, Fanhua; Wang, Yuejin

    2012-01-01

    Phosphine has been used worldwide for the control of stored-product insects for many years. However, the molecular mechanism of its toxicity is not clearly understood. In the current study, larvae of the peach fruit moth were fumigated with phosphine. Proteomic analysis was then performed to identify the regulated proteins. Our results confirmed the phosphine toxicity on the peach fruit moth. The median lethal time LT50 was 38.5 h at 330 ppm at 25 degrees C. During fumigation, the respiration of the peach fruit moth was extremely inhibited. Of the 26 regulated proteins, 16 were identified by MALDI-TOF mass spectrometry after a 24 h treatment. The proteins were classified as related to metabolism (25 %), anti-oxidation (6 %), signal transduction (38 %), or defense (19 %). The rest (13 %) were unclassified. Phosphine regulation of ATP and glutathione contents, as well as of ATP synthase and glutathione S-transferase 2 activities were confirmed by enzyme activity analysis. These results demonstrate that complex transcriptional regulations underlie phosphine fumigation. New theories on the mechanism of phosphine toxicity may also be established based on these results.

  13. Charmed Bottom Baryon Spectroscopy

    SciTech Connect

    Zachary Brown, William Detmold, Stefan Meinel, Konstantinos Orginos

    2012-09-01

    The arena of doubly and triply heavy baryons remains experimentally unexplored to a large extent. This has led to a great deal of theoretical effort being put forth in the calculation of mass spectra in this sector. Although the detection of such heavy particle states may lie beyond the reach of experiments for some time, it is interesting to compare results between lattice QCD computations and continuum theoretical models. Several recent lattice QCD calculations exist for both doubly and triply charmed as well as doubly and triply bottom baryons. In this work we present preliminary results from the first lattice calculation of the mass spectrum of doubly and triply heavy baryons including both charm and bottom quarks. The wide range of quark masses in these systems require that the various flavors of quarks be treated with different lattice actions. We use domain wall fermions for 2+1 flavors (up down and strange) of sea and valence quarks, a relativistic heavy quark action for the charm quarks, and non-relativistic QCD for the heavier bottom quarks. The calculation of the ground state spectrum is presented and compared to recent models.

  14. Dissolver vessel bottom assembly

    DOEpatents

    Kilian, Douglas C.

    1976-01-01

    An improved bottom assembly is provided for a nuclear reactor fuel reprocessing dissolver vessel wherein fuel elements are dissolved as the initial step in recovering fissile material from spent fuel rods. A shock-absorbing crash plate with a convex upper surface is disposed at the bottom of the dissolver vessel so as to provide an annular space between the crash plate and the dissolver vessel wall. A sparging ring is disposed within the annular space to enable a fluid discharged from the sparging ring to agitate the solids which deposit on the bottom of the dissolver vessel and accumulate in the annular space. An inlet tangential to the annular space permits a fluid pumped into the annular space through the inlet to flush these solids from the dissolver vessel through tangential outlets oppositely facing the inlet. The sparging ring is protected against damage from the impact of fuel elements being charged to the dissolver vessel by making the crash plate of such a diameter that the width of the annular space between the crash plate and the vessel wall is less than the diameter of the fuel elements.

  15. Geologic map of the Peach Springs 30' x 60' quadrangle, Mohave and Coconino counties, northwestern Arizona

    USGS Publications Warehouse

    Billingsley, George H.; Block, Debra L.; Dyer, Helen C.

    2006-01-01

    This map is a product of a cooperative project of the U.S. Geological Survey, the U.S. National Park Service, and the Bureau of Land Management to provide geologic map coverage and regional geologic information for visitor services and resource management of Grand Canyon National Park, Lake Mead National Recreation Area, Grand Canyon-Parashant-National Monument, and adjacent lands in northwestern Arizona. This map is a synthesis of previous and new geologic mapping that encompasses the Peach Springs 30' x 60' quadrangle, Arizona. The geologic data will support future geologic, biologic, hydrologic, and other science resource studies of this area conducted by the National Park Service, the Hualapai Indian Tribe, the Bureau of Land Management, the State of Arizona, and private organizations. The Colorado River and its tributaries have dissected the southwestern Colorado Plateau into what is now the southwestern part of Grand Canyon. The erosion of Grand Canyon has exposed about 426 m (1,400 ft) of Proterozoic crystalline metamorphic rocks and granite, about 1,450 m (4,760 ft) of Paleozoic strata, and about 300 m (1,000 ft) of Tertiary sedimentary rocks. Outcrops of Proterozoic crystalline rocks are exposed at the bottom of Grand Canyon at Granite Park from Colorado River Mile 207 to 209, at Mile 212, and in the Lower Granite Gorge from Colorado River Mile 216 to 262, and along the Grand Wash Cliffs in the southwest corner of the map area.

  16. Survey for Resistance to Four Inecticides in Myzus persicae Clones from Peach and Weeds in South-central Washington

    USDA-ARS?s Scientific Manuscript database

    The insecticides esfenvalerate, endosulfan, imidacloprid, and methamidophos were screened against 74 clonal populations of the green peach aphid, Myzus persicae (Sulzer) collected as fundatrices from peach and as apterous virginoparae from peach, and various weeds near potato fields in the Yakima Va...

  17. Comparative RNA-Seq Analysis of Early-Infected Peach Leaves by the Invasive Phytopathogen Xanthomonas arboricola pv. pruni

    PubMed Central

    Socquet-Juglard, Didier; Kamber, Tim; Pothier, Joël F.; Christen, Danilo; Gessler, Cesare; Duffy, Brion; Patocchi, Andrea

    2013-01-01

    Xanthomonas arboricola pv. pruni is a quarantine bacterial pathogen that threatens peach production by causing necrotic spots on leaves and fruits, thus with the potential of severely reducing yields. The current understanding of the host plant defense responses to the pathogen is very limited. Using whole transcriptome sequencing, differential gene expression was analyzed at two time points, 2 h and 12 h post inoculation (hpi), by comparing the inoculated samples to their respective controls. On the total of 19,781 known peach genes that were expressed in all time points and conditions, 34 and 263 were differentially expressed at 2 and 12 hpi, respectively. Of those, 82% and 40% were up-regulated, respectively; and 18% and 60% were down-regulated, respectively. The functional annotation based on gene ontology (GO) analysis highlighted that genes involved in metabolic process and response to stress were particularly represented at 2 hpi whereas at 12 hpi cellular and metabolic processes were the categories with the highest number of genes differentially expressed. Of particular interest among the differentially expressed genes identified were several pathogen-associated molecular pattern (PAMP) receptors, disease resistance genes including several RPM1-like and pathogenesis related thaumatin encoding genes. Other genes involved in photosynthesis, in cell wall reorganization, in hormone signaling pathways or encoding cytochrome were also differentially expressed. In addition, novel transcripts were identified, providing another basis for further characterization of plant defense-related genes. Overall, this study gives a first insight of the peach defense mechanisms during the very early stages of infection with a bacterial disease in the case of a compatible interaction. PMID:23342103

  18. Effect prediction of identified SNPs linked to fruit quality and chilling injury in peach [Prunus persica (L.) Batsch].

    PubMed

    Martínez-García, Pedro J; Fresnedo-Ramírez, Jonathan; Parfitt, Dan E; Gradziel, Thomas M; Crisosto, Carlos H

    2013-01-01

    Single nucleotide polymorphisms (SNPs) are a fundamental source of genomic variation. Large SNP panels have been developed for Prunus species. Fruit quality traits are essential peach breeding program objectives since they determine consumer acceptance, fruit consumption, industry trends and cultivar adoption. For many cultivars, these traits are negatively impacted by cold storage, used to extend fruit market life. The major symptoms of chilling injury are lack of flavor, off flavor, mealiness, flesh browning, and flesh bleeding. A set of 1,109 SNPs was mapped previously and 67 were linked with these complex traits. The prediction of the effects associated with these SNPs on downstream products from the 'peach v1.0' genome sequence was carried out. A total of 2,163 effects were detected, 282 effects (non-synonymous, synonymous or stop codon gained) were located in exonic regions (13.04 %) and 294 placed in intronic regions (13.59 %). An extended list of genes and proteins that could be related to these traits was developed. Two SNP markers that explain a high percentage of the observed phenotypic variance, UCD_SNP_1084 and UCD_SNP_46, are associated with zinc finger (C3HC4-type RING finger) family protein and AOX1A (alternative oxidase 1a) protein groups, respectively. In addition, phenotypic variation suggests that the observed polymorphism for SNP UCD_SNP_1084 [A/G] mutation could be a candidate quantitative trait nucleotide affecting quantitative trait loci for mealiness. The interaction and expression of affected proteins could explain the variation observed in each individual and facilitate understanding of gene regulatory networks for fruit quality traits in peach.

  19. Management of Meloidogyne incognita with tall fescue grass rotations prior to peach orchard establishment

    USDA-ARS?s Scientific Manuscript database

    Root-knot nematodes (Meloidogyne spp.) are important pests of peach in the USA. Preplant fumigant nematicides have been used to control Meloidogyne spp. associated with Southeastern peach production. Unfortunately, growers have increasingly faced economic challenges, making it difficult for them t...

  20. Preplanting tall fescue grass for controlling Meloidogyne incognita in a young peach orchard

    USDA-ARS?s Scientific Manuscript database

    Preplant fumigant nematicides have traditionally been used to control Meloidogyne spp. in peach in the southeastern United States. The current preplant nematicides recommended for managing Meloidogyne spp. in peach include the soil fumigants, 1,3-dichloropropene and metam sodium. Because the econo...

  1. Managing root-knot nematodes: A case for cover crops in establishing peach orchards

    USDA-ARS?s Scientific Manuscript database

    Root-knot nematodes (Meloidogyne spp.) are an important pathogen of peach in the United States. Several Meloidogyne spp. have been reported to cause damage to stone fruits, but M. incognita and M. javanica are the predominant species on peach. Preplant fumigant nematicides have traditionally been ...

  2. Comparison of fruit characters and volatile components in peach-to-nectarine mutants

    USDA-ARS?s Scientific Manuscript database

    In this study, we compared nine fruit attributes and 27 detected volatiles in the peach progenitor, ‘Flameprince’ (FPP), its two independently discovered peach-to-nectarine mutants (HFN and PFN), and a selected nectarine hybrid (SLN). HFN and PFN differed from FPP in fruit size and taste, but shared...

  3. Molecular characterization of peach [Prunus persica (L.) Batsch] germplasm in the United States using microsatellite markers

    USDA-ARS?s Scientific Manuscript database

    Peach [Prunus persica (L.) Batsch] is an important medicinal fruit with immense health benefits and antioxidant activity. In this study, microsatellite markers were used as DNA fingerprinting tools for the identification and characterization of peach germplasm in the United States. Eleven microsatel...

  4. Effects of infrared radiation heating on peeling performance and quality attributes of clingstone peaches

    USDA-ARS?s Scientific Manuscript database

    Salinity and wastewater disposal problems associated with the conventional wet-lye method for peeling clingstone peaches result in considerable negative environment impacts. This study investigated the efficacy of using infrared (IR) heating as an alternative method for peach peel removal without us...

  5. Emergence of root-feeding weevils (Coleoptera: Curculionidae) in central Georgia peach orchards

    USDA-ARS?s Scientific Manuscript database

    Injury to peach roots is common by several plant pathogen species and by larvae of the peachtree borer, Synanthedon exitiosa Say (Lepidoptera: Sesiidae). External feeding injury to peach roots was observed that was not consistent with S. exitiosa injury but was suspected as a result of larval root-...

  6. 7 CFR 917.459 - California Peach Grade and Size Regulation.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ...-N-Cream, Pearl Princess, Pink Giant, Pink Moon, Prima Gattie 8, Prima Peach 13, Prima Peach XV..., Snow Duchess, Snow Fall, Snow Gem, Snow Giant, Snow Jewel, Snow King, Snow Magic, Snow Princess, Sprague Last Chance, Strawberry, Sugar Crisp, Sugar Giant, Summer Dragon, Summer Fling, Summer Lady...

  7. Assessment of Sugar Components and Genes Involved in the Regulation of Sucrose Accumulation in Peach Fruit.

    PubMed

    Vimolmangkang, Sornkanok; Zheng, Hongyu; Peng, Qian; Jiang, Quan; Wang, Huiliang; Fang, Ting; Liao, Liao; Wang, Lu; He, Huaping; Han, Yuepeng

    2016-09-07

    Soluble sugar contents in mature fruits of 45 peach accessions were quantified using gas chromatography analysis. Sucrose is the predominant sugar in mature fruit, followed by glucose and fructose, which have similar concentrations. Overall, sucrose metabolism and accumulation are crucial determinants of sugar content in peach fruit, and there is a wide range of sucrose concentrations among peach genotypes. To understand the mechanisms regulating sucrose accumulation in peach fruit, expression profiles of genes involved in sucrose metabolism and transport were compared among four genotypes. Two sucrose-cleaving enzyme genes (SUS4 and NINV8), one gene involved in sucrose resynthesis (SPS3), and three sugar transporter genes (SUT2, SUT4, and TMT2) were prevalently expressed in peach fruit, and their expression levels are significantly correlated with sucrose accumulation. In contrast, the VAINV genes responsible for sucrose cleavage in the vacuole were weakly expressed in mature fruit, suggesting that the sucrose-cleaving reaction is not active in the vacuole of sink cells of mature peach fruit. This study suggests that sucrose accumulation in peach fruit involves the coordinated interaction of genes related to sucrose cleavage, resynthesis, and transport, which could be helpful for future peach breeding.

  8. Diversity of low chill peaches from Asia, Brasil, Europe and the USA

    USDA-ARS?s Scientific Manuscript database

    One hundred fifty-five peach (Prunus persica) cultivars, from Asia, Brazil, Europe, and the USA, were examined using eleven SSRs to study the genetic relationships among low chill as compared to high chill peach germplasm. Data was analyzed by NTSYSpc to form a similarity matrix using Nei and Li’s ...

  9. 7 CFR 917.442 - California Peach Container and Pack Regulation.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... container. (2) Each package or container of peaches shall bear, on one outside end in plain sight and in... container of peaches shall bear, on one outside end in plain sight and in plain letters, the name and... to consumers, shall bear on one outside end in plain sight and in plain letters, the following count...

  10. Molecular Phylogeny and Identification of the Peach Fruit Fly, Bactrocera zonata, Established in Egypt

    PubMed Central

    Abd-El-Samie, Emtithal M.; El Fiky, Zaki A.

    2011-01-01

    The genetic structure of the Egyptian peach fruit fly (Bactrocera zonata (Saunders) (Diptera: Tephritidae)) population was analyzed using total RNA from adult females. A portion of mitochondrial cytochrome oxidase I (COI), 369 bp was amplified using RT-PCR, and was sequenced and analyzed to clarify the phylogenetic relationship of B. zonata established in Egypt. The data suggested that the gene shared a similarity in sequence compared to Bactrocera COI gene found in GenBank. Molecular phylogenetic analyses were performed based on nucleotide sequences in order to examine the position of the Egyptian population among many other species of fruit flies. The results indicate that four accession numbers of B. zonata (three from New Zealand and one from India) are closely related, while the Egyptian B. zonata are close to the 71 accession numbers of Bactrocera include one B. zonata from New Zealand. These two B. zonata from Egypt and New Zealand showed a close relationship in neighbor—joining analysis using the seven accession numbers of B. zonata. In addition, a theoretical restriction map of the homology portion of the COI gene was constructed using 212 restriction enzymes obtained from the restriction enzyme database to identify the Egyptian and New Zealand B. zonata. PMID:22958094

  11. A Survey of MicroRNA Length Variants Contributing to miRNome Complexity in Peach (Prunus Persica L.).

    PubMed

    Colaiacovo, Moreno; Bernardo, Letizia; Centomani, Isabella; Crosatti, Cristina; Giusti, Lorenzo; Orrù, Luigi; Tacconi, Gianni; Lamontanara, Antonella; Cattivelli, Luigi; Faccioli, Primetta

    2012-01-01

    MicroRNAs (miRNAs) are short non-coding RNA molecules produced from hairpin structures and involved in gene expression regulation with major roles in plant development and stress response. Although each annotated miRNA in miRBase (www.mirbase.org) is a single defined sequence with no further details on possible variable sequence length, isomiRs - namely the population of variants of miRNAs coming from the same precursors - have been identified in several species and could represent a way of broadening the regulatory network of the cell. Next-gen-based sequencing makes it possible to comprehensively and accurately assess the entire miRNA repertoire including isomiRs. The aim of this work was to survey the complexity of the peach miRNome by carrying out Illumina high-throughput sequencing of miRNAs in three replicates of five biological samples arising from a set of different peach organs and/or phenological stages. Three hundred-ninety-two isomiRs (miRNA and miRNA*-related) corresponding to 26 putative miRNA coding loci, have been highlighted by mirDeep-P and analyzed. The presence of the same isomiRs in different biological replicates of a sample and in different tissues demonstrates that the generation of most of the detected isomiRs is not random. The degree of mature sequence heterogeneity is very different for each individual locus. Results obtained in the present work can thus contribute to a deeper view of the miRNome complexity and to better explore the mechanism of action of these tiny regulators.

  12. Validation of the Parents' Evaluation of Aural/Oral Performance of Children (PEACH) Rating Scale.

    PubMed

    Bagatto, Marlene P; Scollie, Susan D

    2013-02-01

    The Parents' Evaluation of Aural/Oral Performance of Children (PEACH) is a caregiver report questionnaire that is suitable for use with children who wear hearing aids. It is available in both a Diary format and a Rating Scale format. Following a critical review of subjective outcome evaluation tools for infants, toddlers, and preschool children (Bagatto, Moodie, Seewald et al, 2011), the Rating Scale version of the PEACH was included in a recently developed guideline for monitoring real-world auditory performance of children who have hearing loss (Bagatto, Moodie, Malandrino et al, 2011). Normative data exist only for the PEACH Diary, not the Rating Scale. This article evaluates whether published normative data for the PEACH Diary (Ching and Hill, 2007) are replicated on a different sample of children using the PEACH Rating Scale. Fifty-nine children with normal hearing aged 2 mo to 83 mo and their primary caregivers participated in the study. Caregivers completed the PEACH Rating Scale for each child with normal hearing. Results indicated close agreement to existing normative data collected with the PEACH Diary, with no differences in scores between males and females and good internal consistency. Age-related trends published for the Diary version were replicated using the Rating Scale version, as significantly lower scores were observed for children 20 mo of age and younger compared to those older than 20 mo of age. The currently published norms for the PEACH Diary are valid for use with the PEACH Rating Scale with caregivers of normal hearing children. This validation work adds to the evidence base of the PEACH Rating Scale and supports its use in clinical practice. American Academy of Audiology.

  13. Comparison of the genetic determinism of two key phenological traits, flowering and maturity dates, in three Prunus species: peach, apricot and sweet cherry

    PubMed Central

    Dirlewanger, E; Quero-García, J; Le Dantec, L; Lambert, P; Ruiz, D; Dondini, L; Illa, E; Quilot-Turion, B; Audergon, J-M; Tartarini, S; Letourmy, P; Arús, P

    2012-01-01

    The present study investigates the genetic determinism of flowering and maturity dates, two traits highly affected by global climate change. Flowering and maturity dates were evaluated on five progenies from three Prunus species, peach, apricot and sweet cherry, during 3–8 years. Quantitative trait locus (QTL) detection was performed separately for each year and also by integrating data from all years together. High heritability estimates were obtained for flowering and maturity dates. Several QTLs for flowering and maturity dates were highly stable, detected each year of evaluation, suggesting that they were not affected by climatic variations. For flowering date, major QTLs were detected on linkage groups (LG) 4 for apricot and sweet cherry and on LG6 for peach. QTLs were identified on LG2, LG3, LG4 and LG7 for the three species. For maturity date, a major QTL was detected on LG4 in the three species. Using the peach genome sequence data, candidate genes underlying the major QTLs on LG4 and LG6 were investigated and key genes were identified. Our results provide a basis for the identification of genes involved in flowering and maturity dates that could be used to develop cultivar ideotypes adapted to future climatic conditions. PMID:22828898

  14. Comparison of the genetic determinism of two key phenological traits, flowering and maturity dates, in three Prunus species: peach, apricot and sweet cherry.

    PubMed

    Dirlewanger, E; Quero-García, J; Le Dantec, L; Lambert, P; Ruiz, D; Dondini, L; Illa, E; Quilot-Turion, B; Audergon, J-M; Tartarini, S; Letourmy, P; Arús, P

    2012-11-01

    The present study investigates the genetic determinism of flowering and maturity dates, two traits highly affected by global climate change. Flowering and maturity dates were evaluated on five progenies from three Prunus species, peach, apricot and sweet cherry, during 3-8 years. Quantitative trait locus (QTL) detection was performed separately for each year and also by integrating data from all years together. High heritability estimates were obtained for flowering and maturity dates. Several QTLs for flowering and maturity dates were highly stable, detected each year of evaluation, suggesting that they were not affected by climatic variations. For flowering date, major QTLs were detected on linkage groups (LG) 4 for apricot and sweet cherry and on LG6 for peach. QTLs were identified on LG2, LG3, LG4 and LG7 for the three species. For maturity date, a major QTL was detected on LG4 in the three species. Using the peach genome sequence data, candidate genes underlying the major QTLs on LG4 and LG6 were investigated and key genes were identified. Our results provide a basis for the identification of genes involved in flowering and maturity dates that could be used to develop cultivar ideotypes adapted to future climatic conditions.

  15. The Cloning and Functional Characterization of Peach CONSTANS and FLOWERING LOCUS T Homologous Genes PpCO and PpFT

    PubMed Central

    Nguyen, Thi Hung; Liang, Huike; Wang, Rui; Liu, Xiayan; Li, Tianhong; Qi, Yafei; Yu, Fei

    2015-01-01

    Flowering is an essential stage of plant growth and development. The successful transition to flowering not only ensures the completion of plant life cycles, it also serves as the basis for the production of economically important seeds and fruits. CONSTANS (CO) and FLOWERING LOCUS T (FT) are two genes playing critical roles in flowering time control in Arabidopsis. Through homology-based cloning and rapid-amplifications of cDNA ends (RACE), we obtained full-lengths cDNA sequences of Prunus persica CO (PpCO) and Prunus persica FT (PpFT) from peach (Prunus persica (L.) Batsch) and investigated their functions in flowering time regulation. PpCO and PpFT showed high homologies to Arabidopsis CO and FT at DNA, mRNA and protein levels. We showed that PpCO and PpFT were nucleus-localized and both showed transcriptional activation activities in yeast cells, consistent with their potential roles as transcription activators. Moreover, we established that the over-expression of PpCO could restore the late flowering phenotype of the Arabidopsis co-2 mutant, and the late flowering defect of the Arabidopsis ft-1 mutant can be rescued by the over-expression of PpFT, suggesting functional conservations of CO and FT genes in peach and Arabidopsis. Our results suggest that PpCO and PpFT are homologous genes of CO and FT in peach and they may function in regulating plant flowering time. PMID:25905637

  16. Application of NIR spectroscopy for firmness evaluation of peaches*

    PubMed Central

    Fu, Xia-ping; Ying, Yi-bin; Zhou, Ying; Xie, Li-juan; Xu, Hui-rong

    2008-01-01

    The use of near infrared (NIR) spectroscopy was proved to be a useful tool for quality analysis of fruits. A bifurcated fiber type NIR spectrometer, with a detection range of 800~2500 nm by InGaAs detector, was used to evaluate the firmness of peaches. Anisotropy of NIR spectra and firmness of peaches in relation to detecting positions of different parts (including three latitudes and three longitudes) were investigated. Both spectra absorbency and firmness of peach were influenced by longitudes (i, ii, iii) and latitudes (A, B, C). For modeling, two thirds of the samples were used as the calibration set and the remaining one third were used as the validation or prediction set. Partial least square regression (PLSR) models for different longitude and latitude spectra and for the whole fruit show that collecting several NIR spectra from different longitudes and latitudes of a fruit for NIR calibration modeling can improve the modeling performance. In addition, proper spectra pretreatments like scattering correction or derivative also can enhance the modeling performance. The best results obtained in this study were from the holistic model with multiplicative scattering correction (MSC) pretreatment, with correlation coefficient of cross-validation r cv=0.864, root mean square error of cross-validation RMSECV=6.71 N, correlation coefficient of calibration r=0.948, root mean square error of calibration RMSEC=4.21 N and root mean square error of prediction RMSEP=5.42 N. The results of this study are useful for further research and application that when applying NIR spectroscopy for objectives with anisotropic differences, spectra and quality indices are necessarily measured from several parts of each object to improve the modeling performance. PMID:18600785

  17. Ultrasound Assisted Extraction of Phenolic Compounds from Peaches and Pumpkins

    PubMed Central

    Altemimi, Ammar; Watson, Dennis G.; Choudhary, Ruplal; Dasari, Mallika R.; Lightfoot, David A.

    2016-01-01

    The ultrasound-assisted extraction (UAE) method was used to optimize the extraction of phenolic compounds from pumpkins and peaches. The response surface methodology (RSM) was used to study the effects of three independent variables each with three treatments. They included extraction temperatures (30, 40 and 50°C), ultrasonic power levels (30, 50 and 70%) and extraction times (10, 20 and 30 min). The optimal conditions for extractions of total phenolics from pumpkins were inferred to be a temperature of 41.45°C, a power of 44.60% and a time of 25.67 min. However, an extraction temperature of 40.99°C, power of 56.01% and time of 25.71 min was optimal for recovery of free radical scavenging activity (measured by 1, 1-diphenyl-2-picrylhydrazyl (DPPH) reduction). The optimal conditions for peach extracts were an extraction temperature of 41.53°C, power of 43.99% and time of 27.86 min for total phenolics. However, an extraction temperature of 41.60°C, power of 44.88% and time of 27.49 min was optimal for free radical scavenging activity (judged by from DPPH reduction). Further, the UAE processes were significantly better than solvent extractions without ultrasound. By electron microscopy it was concluded that ultrasonic processing caused damage in cells for all treated samples (pumpkin, peach). However, the FTIR spectra did not show any significant changes in chemical structures caused by either ultrasonic processing or solvent extraction. PMID:26885655

  18. Advanced accident sequence precursor analysis level 2 models

    SciTech Connect

    Galyean, W.J.; Brownson, D.A.; Rempe, J.L.

    1996-03-01

    The U.S. Nuclear Regulatory Commission Accident Sequence Precursor program pursues the ultimate objective of performing risk significant evaluations on operational events (precursors) occurring in commercial nuclear power plants. To achieve this objective, the Office of Nuclear Regulatory Research is supporting the development of simple probabilistic risk assessment models for all commercial nuclear power plants (NPP) in the U.S. Presently, only simple Level 1 plant models have been developed which estimate core damage frequencies. In order to provide a true risk perspective, the consequences associated with postulated core damage accidents also need to be considered. With the objective of performing risk evaluations in an integrated and consistent manner, a linked event tree approach which propagates the front end results to back end was developed. This approach utilizes simple plant models that analyze the response of the NPP containment structure in the context of a core damage accident, estimate the magnitude and timing of a radioactive release to the environment, and calculate the consequences for a given release. Detailed models and results from previous studies, such as the NUREG-1150 study, are used to quantify these simple models. These simple models are then linked to the existing Level 1 models, and are evaluated using the SAPHIRE code. To demonstrate the approach, prototypic models have been developed for a boiling water reactor, Peach Bottom, and a pressurized water reactor, Zion.

  19. Identification of putative chemosensory receptor genes from yellow peach moth Conogethes punctiferalis (Guenée) antennae transcriptome

    PubMed Central

    Ge, Xing; Zhang, Tiantao; Wang, Zhenying; He, Kanglai; Bai, Shuxiong

    2016-01-01

    The yellow peach moth, Conogethes punctiferalis, is an extremely important polyphagous insect in Asia. The chemosensory systems of moth play an important role in detecting food, oviposition sites and mate attraction. Several antennal chemosensory receptors are involved in odor detection. Our study aims to identify chemosensory receptor genes for potential applications in behavioral responses of yellow peach moth. By transcriptomic analysis of male and female antennae, 83 candidate chemosensory receptors, including 62 odorant receptors, 11 ionotropic receptors and 10 gustatory receptors were identified. Through Blast and sequence alignment, the highly conserved co-receptor Orco was annotated, eight unigenes clustered into pheromone receptors, and two clustered as sugar receptor. Among the IRs, one unigenes was similar with co-receptors IR25a. Expression levels of 50 odorant receptors were further evaluated by quantitative real-time PCR in antennae. All the ORs tested were detected in antennae and some of which were associated with sex-biased expression. The chemosensory receptors identified in C. punctiferalis provide a foundational resource for further analysis on olfaction for behavior. The expression profiles of ORs in antennae indicated variant functions in olfactory recognition, and our results provided the possibility for the potential application of semiochemical to control this pest moth. PMID:27659493

  20. Mapping quantitative trait loci associated with chilling requirement, heat requirement and bloom date in peach (Prunus persica).

    PubMed

    Fan, Shenghua; Bielenberg, Douglas G; Zhebentyayeva, Tetyana N; Reighard, Gregory L; Okie, William R; Holland, Doron; Abbott, Albert G

    2010-03-01

    *Chilling requirement, together with heat requirement, determines the bloom date, which has an impact on the climatic distribution of the genotypes of tree species. The molecular basis of floral bud chilling requirement is poorly understood, despite its importance to the adaptation and production of fruit trees. In addition, the genetic nature of heat requirement and the genetic interrelationships among chilling requirement, heat requirement and bloom date remain unclear. *A peach (Prunus persica) F(2) population of 378 genotypes developed from two genotypes with contrasting chilling requirements was used for linkage map construction and quantitative trait loci (QTL) mapping. The floral bud chilling and heat requirements of each genotype were evaluated over 2 yr and the bloom date was scored over 4 yr. *Twenty QTLs with additive effects were identified for three traits, including one major QTL for chilling requirement and two major QTLs for bloom date. The majority of QTLs colocalized with QTLs for other trait(s). In particular, one genomic region of 2 cM, pleiotropic for the three traits, overlapped with the sequenced peach EVG region. *This first report on the QTL mapping of floral bud chilling requirement will facilitate marker-assisted breeding for low chilling requirement cultivars and the map-based cloning of genes controlling chilling requirement. The extensive colocalization of QTLs suggests that there may be one unified temperature sensing and action system regulating chilling requirement, heat requirement and bloom date together.

  1. Reading Nature from a "Bottom-Up" Perspective

    ERIC Educational Resources Information Center

    Magntorn, Ola; Hellden, Gustav

    2007-01-01

    This paper reports on a study of ecology teaching and learning in a Swedish primary school class (age 10-11 yrs). A teaching sequence was designed to help students read nature in a river ecosystem. The teaching sequence had a "bottom up" approach, taking as its starting point a common key organism--the freshwater shrimp. From this…

  2. Reading Nature from a "Bottom-Up" Perspective

    ERIC Educational Resources Information Center

    Magntorn, Ola; Hellden, Gustav

    2007-01-01

    This paper reports on a study of ecology teaching and learning in a Swedish primary school class (age 10-11 yrs). A teaching sequence was designed to help students read nature in a river ecosystem. The teaching sequence had a "bottom up" approach, taking as its starting point a common key organism--the freshwater shrimp. From this…

  3. Paenibacillus shenyangensis sp. nov., a bioflocculant-producing species isolated from soil under a peach tree.

    PubMed

    Jiang, Binhui; Zhao, Xin; Liu, Jinliang; Fu, Lili; Yang, Chengcheng; Hu, Xiaomin

    2015-01-01

    A Gram-stain-positive, aerobic or facultatively anaerobic, rod-shaped, non-motile, endospore-forming bacterium, strain A9(T), was isolated in 1996 from a soil sample collected under a peach tree in Qingnian Park in Shenyang, PR China, and its taxonomic position was investigated using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain belonged to the genus Paenibacillus, and was most closely related to the type strain of Paenibacillus hunanensis with a 16S rRNA gene sequence similarity of 96.7 % and a DNA-DNA relatedness value of 51.6 %. The major polar lipids of strain A9(T) were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The predominant menaquinone was MK-7 and the major cellular fatty acids were anteiso-C15 : 0, C16 : 0 and iso-C15 : 0. The DNA G+C content was 51.9 mol%. Based on these results, it is concluded that strain A9(T) represents a novel species of the genus Paenibacillus, for which the name Paenibacillus shenyangensis sp. nov. is proposed, with A9(T) ( = JCM 19307(T) = CGMCC 2040(T)) as the type strain.

  4. Phase-equilibrium geobarometers for silicic rocks based on rhyolite-MELTS—Part 3: Application to the Peach Spring Tuff (Arizona-California-Nevada, USA)

    NASA Astrophysics Data System (ADS)

    Pamukcu, Ayla S.; Gualda, Guilherme A. R.; Ghiorso, Mark S.; Miller, Calvin F.; McCracken, Reba G.

    2015-03-01

    Peach Spring samples are due to alteration. Use of altered whole-pumice compositions in rhyolite-MELTS simulations is likely the cause of the incorrect crystallization sequence reported previously for Peach Spring compositions. Using the rhyolite-MELTS geobarometer, we estimate a more realistic composition for Peach Spring Tuff high-silica rhyolite, and the calculated composition finds close matches with some analyzed rocks and results in the expected sequence of crystallization.

  5. Effect of storage temperature on the degradation of dimethoate in fortified orange and peach juices.

    PubMed

    Athanasopoulos, P; Kyriakidis, N B; Georgitsanakou, I

    2000-10-01

    The effect of storage temperature on dimethoate degradation in fortified orange and peach juices was studied. The insecticide was aseptically injected into packed orange and peach juices and stored at 40, 15, and 0 degrees C. Samples were taken at regular time intervals and were examined for dimethoate residues. The residues were determined with a simple gas chromatographic method; the recoveries of dimethoate from orange and peach juices were found to be from 88 to 114% for both products. The limits of determination were 0.004 and 0.003 mg/kg, respectively. From the experimental data, rate constants, half-lives, and activation energies for the decomposition of dimethoate in orange and peach juices were evaluated. During the storage of fruit juices in refrigerated rooms (0 degrees C) half-lives of dimethoate were found to be largely extended, being 1733 days for orange juice and 2310 days for peach juice. Corresponding times for storage at 15 degrees C were 533 days for both juices and for storage at 40 degrees C 24 days for orange juice and 24.6 days for peach juice. The activation energy for dimethoate in orange juice was 22.3 kcal/mol and for peach juice, 21. 2 kcal/mol.

  6. An inexpensive bottom water sampler

    NASA Astrophysics Data System (ADS)

    Reed, Allen; Carmichael, Aaron; De Angelis, Marie A.

    1997-05-01

    An inexpensive PVC bottom water sampler for collecting near-bottom water samples at a precise height (0.5 to 2.0 m) above the water/sediment interface is described. The RCD (Reed, Carmichael, de Angelis) bottom water sampler can be used with a standard oceanographic hydrowinch, can be made of readily available material (PVC pipe), costs under $300.00 to build, can be built in under 24 hours, is completely mechanical, and can be modified to fit specific needs. The RCD bottom water sampler was successfully tested in northern California coastal waters at depths up to 1071 m.

  7. Pomegranate juice adulteration by addition of grape or peach juices.

    PubMed

    Nuncio-Jáuregui, Nallely; Calín-Sánchez, Ángel; Hernández, Francisca; Carbonell-Barrachina, Ángel A

    2014-03-15

    Pomegranate juice has gained a high reputation for its health properties and consequently is now a highly demanded product. However, owing to the limited production and high price of fresh pomegranates, adulteration of pomegranate juice seems to be happening. Hence it is imperative to establish criteria for detecting adulteration. Addition of grape juice significantly increased the contents of Ca, Mg and Fe and especially tartaric acid and proline and simultaneously decreased the content of K. Addition of peach juice up to 10% (v/v) only resulted in a significant increase in sucrose content. Regarding the volatile composition, adulteration of pomegranate juice with grape juice resulted in significant increases in acetic acid, isoamyl butyrate and especially 1-hexanol and linalool, while adulteration with peach juice resulted in significant increases in butyl acetate, isobutyl butyrate, benzyl acetate and especially isoamyl butyrate. The control protocols used in this study can serve as a basis for identification of pomegranate juice adulteration. It is important to highlight that it is necessary to simultaneously analyze and have results from several parameters to conclude that a particular pomegranate juice has been adulterated by mixing with another fruit juice. © 2013 Society of Chemical Industry.

  8. An Overview of Peach, the Atmospheric Electricity Component of Hymex

    NASA Astrophysics Data System (ADS)

    Defer, E.; Coquillat, S.; Pinty, J.; Soula, S.; Martin, J.; Prieur, S.; Richard, E.; Rison, W.; Krehbiel, P. R.; Rodeheffer, D.; Ducrocq, V.; Bousquet, O.; Labatut, L.; Roussot, O.; Farges, T.; Vergeiner, C.; Schulz, W.; Anderson, G.; Pedeboy, S.; Betz, H.; Lagouvardos, K.; Ortega, P.; Molinié, G.; Blanchet, P.

    2012-12-01

    The PEACH (Projet en Electricité Atmosphérique pour la Campagne HyMeX) project is the Atmospheric Electricity component of the HyMeX (Hydrology cycle in the Mediterranean Experiment) experiment aimed at measuring and analyzing the lightning activity and electrical state of thunderstorms over the Mediterranean Sea. During the SOP1 (Special Observation Period; September-October 2012), records of four European operational lightning detection networks (ATDNET, UKMO; EUCLID; LINET, nowcast; ZEUS, NOA) and the NMT Lightning Mapping Array (LMA) were used to locate and characterize the lightning activity over South-Eastern France. Other research instruments such as induction rings (LA), electric field measurements (OVE; LA; NMT), video camera (OVE; ONERA), microbarometer and microphone arrays (CEA) were deployed to document the properties of the lightning flashes as well as the electrical state of parent thunderclouds. All these observations are used to document the evolution of the electrical activity during the life cycle of SOP storms in conjunction with microphysics and kinematics description of the parent storms as derived mainly from ground-based radar and airborne in situ observations. Interpretation of the results are performed with the use of cloud models (MM5; MESO-NH with its electrification and lightning schemes). We will present an overview of the PEACH project. We will discuss some of the recorded cases. We will also introduce some of the products that will be made available to the HyMeX Community.

  9. Role of polyamines in peach fruit development and storage.

    PubMed

    Liu, Jihong; Nada, Kazuyoshi; Pang, Xiaoming; Honda, Chikako; Kitashiba, Hiroyasu; Moriguchi, Takaya

    2006-06-01

    To investigate the role of polyamines in pre- and post-harvest fruit development of 'Akatsuki' peach (Prunus persica (L.) Batsch.) we measured polyamine concentrations, activities of polyamine biosynthetic enzymes and expression of genes encoding these enzymes. Concentrations of the free polyamines, putrescine (Put), spermidine (Spd) and spermine (Spm) in pre-harvest fruit peaked 16 days after full bloom (DAF) and then progressively decreased until harvest with the exception of Put, which showed a second peak at 94 DAF, just before the onset of ethylene production. In post-harvest fruit, minor changes in concentrations of Spd and Spm were observed, whereas Put concentration peaked on the harvest day, followed by an abrupt decrease and a subsequent 2-fold increase, which was opposite to the fluctuating pattern of ethylene production. Activities of arginine decarboxylase (ADC) and ornithine decarboxylase (ODC) peaked during the first stage of fruit development and then decreased until 80 DAF, after which the activities were below detection limits, suggesting that Put is synthesized during the early stage of fruit development. Activity of S-adenosylmethionine decarboxylase (SAMDC) decreased progressively until the end of S2. Expression levels of five putative polyamine biosynthetic genes, ADC, ODC, SAMDC, spermidine synthase (SPDS) and spermine synthase (SPMS), in pre-harvest and post-harvest fruit did not coincide precisely with the observed changes in enzymatic activities and polyamine concentrations. The possible role of polyamines during peach fruit development and the relationship between polyamines and ethylene biosynthesis are discussed.

  10. Sequence landscapes.

    PubMed Central

    Clift, B; Haussler, D; McConnell, R; Schneider, T D; Stormo, G D

    1986-01-01

    We describe a method for representing the structure of repeating sequences in nucleic-acids, proteins and other texts. A portion of the sequence is presented at the bottom of a CRT screen. Above the sequence is its landscape, which looks like a mountain range. Each mountain corresponds to a subsequence of the sequence. At the peak of every mountain is written the number of times that the subsequence appears. A data structure called a DAWG, which can be built in time proportional to the length of the sequence, is used to construct the landscape. For the 40 thousand bases of bacteriophage T7, the DAWG can be built in 30 seconds. The time to display any portion of the landscape is less than a second. Using sequence landscapes, one can quickly locate significant repeats. PMID:3753762

  11. Spatial distribution of earthquakes off the east coast of the Kanto region along the Japan Trench deduced from ocean bottom seismographic observations and their relations with the aftershock sequence of the 2011 off the Pacific coast of Tohoku Earthquake

    NASA Astrophysics Data System (ADS)

    Yamada, Tomoaki; Nakahigashi, Kazuo; Kuwano, Asako; Mochizuki, Kimihiro; Sakai, Shin'ichi; Shinohara, Masanao; Hino, Ryota; Murai, Yoshio; Takanami, Tetsuo; Kanazawa, Toshihiko

    2011-07-01

    The 2011 Tohoku earthquake hit the forearc region of the Japan Trench on March 11, 2011. The rupture zone seemed to reach off the coast of the Kanto region. We had conducted ocean bottom seismographic observations off the coast of the Kanto in 2008 and estimated 851 hypocenter locations around the south part of the 2011 off the Pacific coast of Tohoku Earthquake by using over 50 ocean bottom seismometers (OBSs) and routine data jointly. The hypocenters distributed some clusters, and we found a few seismic gaps at the boundary zones of the clusters. The most remarkable seismic gap was positioned at the edge of intervened Philippine Sea plate (PHS) between the North American plate (NA) and Pacific plate (PAC). We compare the epicenter distributions with the 2011 aftershock distribution determined by routine data. The aftershocks are segmented spatially and there are some seismic gaps among the segments. The remarkable low places are consistent with the boundary zones of each cluster we estimated from the 2008 data. We infer that those regions have strong heterogeneity resulting from strong deformations caused by various subduction processes, such as intervening PHS between NA and PAC, seamount chains and changes in physical properties.

  12. Age of the Peach Springs Tuff, southeastern California and western Arizona

    USGS Publications Warehouse

    Nielson, J.E.; Lux, D.R.; Dalrymple, G.B.; Glazner, A.F.

    1990-01-01

    Sanidine separates from pumice of the early Miocene Peach Springs Tuff are concordantly dated at 18.5??0.2 Ma by two isotopic techniques. The Peach Springs Tuff is the only known unit that can be correlated between isolated outcrops of Miocene strata from the central Mojave Desert of southeastern California to the western Colorado Plateau in Arizona, across five structural provinces, a distance of 350 km. Thus, the age of the Peach Springs Tuff is important to structural and paleogeographic reconstructions of a large region. -from Authors

  13. Vacuum still bottoms viscometer

    SciTech Connect

    Dinsmore, T.V.; Wilson, J.H.

    1985-01-01

    A viscometer system that is capable of measuring VSB viscosity on-line has been designed, constructed, and tested. The viscometer will not only provide continuous on-line measurements for process control purposes, but will also determine viscosity as functions of temperature and shear rate. The latter results may be used to verify design-base information for direct coal liquefaction demonstration plants. The viscosities of Wilsonville samples of VSB and LSRC were determined as functions of shear rate and, in the case of LSRC, temperature. The VSB viscosity was found to be shear-rate sensitive, while the LSRC viscosity was temperature sensitive. A 24-h test run was unsuccessful, apparently because the check valves in the pump plugged; however, all other mechanical, electrical, and electronic equipment operated satisfactorily. The source of the plugging was thought to be degradation products, which should not cause difficulties in the pilot plant where fresh vacuum bottoms feed is always available. In summary, the results obtained in this study indicate that the viscometer system is ready to be transported to a plant such as Wilsonville and operated on-line. 7 figs., 5 tabs.

  14. Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures.

    PubMed Central

    Hernández, C; Flores, R

    1992-01-01

    Peach latent mosaic viroid (PLMVd), the causal agent of peach latent mosaic disease, has been sequenced and found to be a circular RNA molecule of 337 nucleotide residues, which adopts a branched conformation when it is folded in the model of lowest free energy. PLMVd exhibits limited homologies with other viroids and some satellite RNAs, but it does not have any of the central conserved sequences characteristic of the subgroups of typical viroids. However, a segment of approximately one-third of the PLMVd sequence has the elements required to form in the RNAs of both polarities the hammerhead structures proposed to act in the in vitro self-cleavage of avocado sunblotch viroid (ASBVd) and some satellite RNAs. Plus and minus partial- and full-length RNA transcripts of PLMVd containing the hammerhead structures displayed self-cleavage during transcription and after purification as predicted by these structures. These data are consistent with the high stability of the PLMVd hammerhead structures, more similar to the corresponding structures of some satellite RNAs than to those of ASBVd, and indicate that the self-cleavage reactions of PLMVd are most probably mediated by single hammerhead structures. Our results support the inclusion of PLMVd in a viroid subgroup represented by ASBVd, whose members are characterized by their ability to self-cleave in vitro, and probably in vivo, through hammerhead structures. A consensus phylogenetic tree has been obtained suggesting that PLMVd, together with ASBVd, may represent an evolutionary link between viroids and viroid-like satellite RNAs. Images PMID:1373888

  15. Gene regulation of anthocyanin biosynthesis in two blood-flesh peach (Prunus persica (L.) Batsch) cultivars during fruit development* #

    PubMed Central

    Jiao, Yun; Ma, Rui-juan; Shen, Zhi-jun; Yan, Juan; Yu, Ming-liang

    2014-01-01

    The blood-flesh peach has become popular in China due to its attractive anthocyanin-induced pigmentation and antioxidant properties. In this study, we investigated the molecular mechanisms underlying anthocyanin accumulation by examining the expression of nine genes of the anthocyanin biosynthesis pathway found in the peach mesocarp. Expression was measured at six developmental stages in fruit of two blood-flesh and one white-flesh peach cultivars, using quantitative reverse transcription polymerase chain reaction (qRT-PCR). Results show that the expression of the chalcone synthase (CHS) gene was closely related to anthocyanin accumulation in both of the blood-flesh peaches. In the white-flesh peach, we found that the transcription level of phenylalanine ammonia-lyase (PAL) during fruit development was much lower than that in the blood-flesh peach, even though all other genes of the anthocyanin biosynthesis pathway were highly expressed, suggesting that the PAL gene may be limiting in anthocyanin production in the white-flesh peach. Moreover, the transcription levels of the CHS and UDP-glucose-flavonoid 3-O-glucosyltransferase (UFGT) genes were markedly up-regulated at three days after bag removal (DABR) in the blood-flesh peach, suggesting that CHS and UFGT are the key genes in the process of anthocyanin biosynthesis for both of the blood-flesh peaches. The present study will be of great help in improving understanding of the molecular mechanisms involved in anthocyanin accumulation in blood-flesh peaches. PMID:25183035

  16. Gene regulation of anthocyanin biosynthesis in two blood-flesh peach (Prunus persica (L.) Batsch) cultivars during fruit development.

    PubMed

    Jiao, Yun; Ma, Rui-juan; Shen, Zhi-jun; Yan, Juan; Yu, Ming-liang

    2014-09-01

    The blood-flesh peach has become popular in China due to its attractive anthocyanin-induced pigmentation and antioxidant properties. In this study, we investigated the molecular mechanisms underlying anthocyanin accumulation by examining the expression of nine genes of the anthocyanin biosynthesis pathway found in the peach mesocarp. Expression was measured at six developmental stages in fruit of two blood-flesh and one white-flesh peach cultivars, using quantitative reverse transcription polymerase chain reaction (qRT-PCR). Results show that the expression of the chalcone synthase (CHS) gene was closely related to anthocyanin accumulation in both of the blood-flesh peaches. In the white-flesh peach, we found that the transcription level of phenylalanine ammonia-lyase (PAL) during fruit development was much lower than that in the blood-flesh peach, even though all other genes of the anthocyanin biosynthesis pathway were highly expressed, suggesting that the PAL gene may be limiting in anthocyanin production in the white-flesh peach. Moreover, the transcription levels of the CHS and UDP-glucose-flavonoid 3-O-glucosyltransferase (UFGT) genes were markedly up-regulated at three days after bag removal (DABR) in the blood-flesh peach, suggesting that CHS and UFGT are the key genes in the process of anthocyanin biosynthesis for both of the blood-flesh peaches. The present study will be of great help in improving understanding of the molecular mechanisms involved in anthocyanin accumulation in blood-flesh peaches.

  17. Bottom ash boosts poor soil

    SciTech Connect

    Stanley, D.

    1993-04-01

    This article describes agricultural uses of fluidized bed bottom ash residue from burning limestone and coal in electric power generating plants: as a limestone substitute, to increase calcium levels in both soil and plants, and as a gypsom-containing soil amendment. Apples and tomatoes are the crops used. The industrial perspective and other uses of bottom ash are also briefly described.

  18. Field and geochemical investigations of the Peach Springs Tuff, southeastern California, western Arizona, and southern Nevada

    SciTech Connect

    Buesch, D.C.

    1992-01-01

    Three separate studies are presented that involve the 18.5 Ma Peach Springs Tuff (PST), a wide-spread ignimbrite exposed in southeastern California, western Arizona, and southern Nevada. In Chapter I, electron microprobe analyses of feldspar phenocrysts in the PST and three other ignimbrites show that the feldspar geochemistry can distinguish the tephra units. Chapter 2 presents a detailed physical volcanology study of the formation of multiple lithic breccia horizons in the PST at a location at least 140 km from the proposed vent area. A model is proposed whereby (1) locally derived lithic fragments are incorporated into the boundary layer of the ash-rich pyroclastic flow, (2) the boundary layer decouples from the ash-rich pyroclastic flow, (3) lithic-laden density driven pyroclastic flows sweep down local topography, and (4) intermingle with the ash-rich pyroclastic flow in the valley bottoms. The lithic breccias are very similar in grain size, texture, and structure to breccias located in near vent regions and care must be taken when interpreting ancient breccia deposits. The influence on sedimentation in post-PST depositional environments is evaluated in Chapter 3. Criteria are used to infer that deposition was (1) shortly after deposition, or (2) an indeterminate amount of time after deposition of the PST. Lithofacies in pre- and post-PST sedimentary rocks show there is a thinning and fining upward trend in nearly all environments, except in narrow valleys adjacent to areas of high relief. The inferred shifts in depositional environments resulted from the lowering of the local base level in response to filling basins with ignimbrite. Formation of partially to densely welded tuff, and development of a vapor-phase lithified cap of nonwelded tuff (1) reduces incision by streams, (2) promotes lateral cutting of the streams and subsequent stripping of the nonwelded nonlithified tuff, and (3) significantly reduces the amount of tephra that can be eroded.

  19. Hyperspectral imaging detection of decayed honey peaches based on their chlorophyll content.

    PubMed

    Sun, Ye; Wang, Yihang; Xiao, Hui; Gu, Xinzhe; Pan, Leiqing; Tu, Kang

    2017-11-15

    Honey peach is a very common but highly perishable market fruit. When pathogens infect fruit, chlorophyll as one of the important components related to fruit quality, decreased significantly. Here, the feasibility of hyperspectral imaging to determine the chlorophyll content thus distinguishing diseased peaches was investigated. Three optimal wavelengths (617nm, 675nm, and 818nm) were selected according to chlorophyll content via successive projections algorithm. Partial least square regression models were established to determine chlorophyll content. Three band ratios were obtained using these optimal wavelengths, which improved spatial details, but also integrates the information of chemical composition from spectral characteristics. The band ratio values were suitable to classify the diseased peaches with 98.75% accuracy and clearly show the spatial distribution of diseased parts. This study provides a new perspective for the selection of optimal wavelengths of hyperspectral imaging via chlorophyll content, thus enabling the detection of fungal diseases in peaches. Copyright © 2017 Elsevier Ltd. All rights reserved.

  20. New method for the determination of 1,1-dimethylhydrazine residues in apples and peaches.

    PubMed

    Wright, D

    1987-01-01

    A new method for determining 1,1-dimethylhydrazine (UDMH) in peaches and apples is presented. The method consists of extraction with L-ascorbic acid, derivatization with 2-nitrobenzaldehyde to the corresponding hydrazone, and cleanup on an alumina column. The hydrazone derivative is determined by gas chromatography using an electron-capture detector. Recoveries were determined from 10 to 100 ppb. Stability of the UDMH residues on frozen peaches was investigated, and results indicate that the residues degrade even while frozen.

  1. An element of the tertiary structure of Peach latent mosaic viroid RNA revealed by UV irradiation.

    PubMed

    Hernández, Carmen; Di Serio, Francesco; Ambrós, Silvia; Daròs, José-Antonio; Flores, Ricardo

    2006-09-01

    Following UV irradiation, denaturing polyacrylamide gel electrophoresis and Northern blot hybridization revealed a cross-link in Peach latent mosaic viroid (PLMVd) plus-strand RNA. Primer extension and partial alkaline hydrolysis of the UV-irradiated PLMVd plus-strand RNA resulting from the hammerhead-mediated self-cleavage mapped the cross-link at U81 and at the 3'-terminal C289 (or at a very proximal nucleotide). Supporting this notion, in vitro-synthesized PLMVd plus-strand RNAs with short insertions/deletions at their 3' termini failed to cross-link. Because U81 and C289 are conserved in PLMVd variants and because the initiation site of PLMVd minus-strand RNA maps at a short double-stranded motif containing C289, the UV-photo-cross-linkable element of tertiary structure may be functionally significant. A second cross-linked species similar in size and sequence to the monomeric circular PLMVd form, observed in some PLMVd variants, probably derives from UV-induced ligation of the two termini resulting from self-cleavage.

  2. Characterization of an S-locus receptor protein kinase-like gene from peach.

    PubMed

    Bassett, Carole L; Nickerson, Michael L; Farrell, Robert E; Artlip, Timothy S; El Ghaouth, Ahmed; Wilson, Charles L; Wisniewski, Michael E

    2005-04-01

    A receptor-like protein kinase gene (Ppsrkl1) was isolated from a peach (Prunus persica (L.) Batsch.) bark cDNA library prepared with RNAs isolated from bark collected in December (cold acclimated). Sequence analysis indicated that this gene is related to the S-locus family of receptor protein kinases (SRKs) and that it shares greatest homology with ZMPK1 from maize and At4g32300 from Arabidopsis, both of which are intron-less genes. In bark tissues, Ppsrkl1 is induced by water deficit treatment, repressed by short-day photoperiods and showed no response to cold treatment. The Ppsrkl1 mRNA also increased in roots in response to water deficit. In fruit, Ppsrkl1 shows no response up to 6 h after wounding, but at 12 and 24 h after wounding, Ppsrkl1 mRNA shows an abrupt decline. This decline was prevented by the addition of salicylic acid to the wound site. The Ppsrkl1 mRNA rapidly decreased in fruit after 10-min exposure to UV-C radiation, followed by a return to normal levels within 1.5 h. Taken together, these experiments indicate that Ppsrkl1 is negatively regulated by light and positively influenced by salicylic acid treatment in fruit and water stress in bark and roots.

  3. Comment: PAGES: Always Bottom Up

    NASA Astrophysics Data System (ADS)

    Bradley, Raymond

    2004-06-01

    In a recent article titled ``Back to the Future'' (Eos, 16 March, p. 107) L. C. Witton lays out the goals of IGBP-PAGES for the next few years, noting that, ``PAGES is aiming to become a truly bottom-up organization that is driven by the insights of individual scientists....'' In fact, PAGES has always been a truly bottom-up organization, and this statement unfortunately fosters the view that it has been otherwise. Those who promote such a view choose to overlook the countless workshops that PAGES has organized, largely at the suggestion of those ``at the bottom,'' and the numerous publications that have resulted from these meetings.

  4. Whole-Genome Analysis of Diversity and SNP-Major Gene Association in Peach Germplasm

    PubMed Central

    Micheletti, Diego; Dettori, Maria Teresa; Micali, Sabrina; Aramini, Valeria; Pacheco, Igor; Da Silva Linge, Cassia; Foschi, Stefano; Banchi, Elisa; Barreneche, Teresa; Quilot-Turion, Bénédicte; Lambert, Patrick; Pascal, Thierry; Iglesias, Ignasi; Carbó, Joaquim; Wang, Li-rong; Ma, Rui-juan; Li, Xiong-wei; Gao, Zhong-shan; Nazzicari, Nelson; Troggio, Michela; Bassi, Daniele; Rossini, Laura; Verde, Ignazio; Laurens, François; Arús, Pere; Aranzana, Maria José

    2015-01-01

    Peach was domesticated in China more than four millennia ago and from there it spread world-wide. Since the middle of the last century, peach breeding programs have been very dynamic generating hundreds of new commercial varieties, however, in most cases such varieties derive from a limited collection of parental lines (founders). This is one reason for the observed low levels of variability of the commercial gene pool, implying that knowledge of the extent and distribution of genetic variability in peach is critical to allow the choice of adequate parents to confer enhanced productivity, adaptation and quality to improved varieties. With this aim we genotyped 1,580 peach accessions (including a few closely related Prunus species) maintained and phenotyped in five germplasm collections (four European and one Chinese) with the International Peach SNP Consortium 9K SNP peach array. The study of population structure revealed the subdivision of the panel in three main populations, one mainly made up of Occidental varieties from breeding programs (POP1OCB), one of Occidental landraces (POP2OCT) and the third of Oriental accessions (POP3OR). Analysis of linkage disequilibrium (LD) identified differential patterns of genome-wide LD blocks in each of the populations. Phenotypic data for seven monogenic traits were integrated in a genome-wide association study (GWAS). The significantly associated SNPs were always in the regions predicted by linkage analysis, forming haplotypes of markers. These diagnostic haplotypes could be used for marker-assisted selection (MAS) in modern breeding programs. PMID:26352671

  5. Monitoring of pesticide residues in fresh peaches produced under conventional and integrated crop management cultivation.

    PubMed

    Tsakiris, I N; Danis, T G; Stratis, I A; Nikitovic, D; Dialyna, I A; Alegakis, A K; Tsatsakis, A M

    2004-07-01

    The frequency and severity of crop protection product (pesticide) contamination of peaches grown conventionally were compared with those of peaches grown by integrated crop management (ICM). The peach samples (n = 150) were collected preharvest (June-August 2001) from both conventional (n = 55) and ICM (n = 95) cultivations from the Pella and Imathia districts of Macedonia, Northern Greece. The residue levels of selected insecticides, fungicides and acaricides in peach samples were determined by gas chromatography-mass spectrometry following solid-phase extraction. The concentrations of all detected pesticides were lower than the maximum residue limits (MRLs) in all peach samples grown with the ICM system (p<0.001). However, chlorpyrifos residues at levels higher than the MRLs were detected in four peach samples (i.e. 7% of the total samples) grown by the conventional system. Comparing the results for both cultivation methods with the reported average percentage (3.6%) of fruit samples with pesticide residues above the MRLs (European Union report for Greece in 2001), it was concluded that the initial implementation of the ICM in Greece was successful. The present study indicates that ICM cultivation has a higher efficiency in terms of product safety and quality. Furthermore, the results suggest that the application of conventional cultivation requires continuous monitoring of various crop protection product levels.

  6. Physicochemical, antioxidant and sensory properties of peach wine made from redhaven cultivar.

    PubMed

    Davidović, Sonja M; Veljović, Mile S; Pantelić, Milica M; Baošić, Rada M; Natić, Maja M; Dabić, Dragana Č; Pecić, Sonja P; Vukosavljević, Predrag V

    2013-02-13

    Physicochemical, sensory, and health-related characteristics of peach wine produced from Redhaven variety and selected white wines produced from various grape varieties were determined and compared. The alcohol content, titratable acidity, and total extract of peach wine was significantly lower compared with that of white wines, while its pH value was higher. The content of total phenolics (TPC) and flavonoids (TFC) of peach wine (402.53 mg/L GAE and 332.67 mg CAE/L, respectively) have been found significantly higher in comparison with that of white wines (TPC range 243.67-319.00 mg/L GAE, TFC range 129.67-175.17 mg CAE/L). The main phenolic compounds found in peach wine were chlorogenic acid, caffeic acid, and catechin (3.59, 0.87, and 0.60 mg/L, respectively). Antioxidant capacities were strongly correlated with total phenolics with correlation coefficients over 0.99. The highest antioxidant capacity was ascribed to peach wine. The results of sensory analysis indicated that the peach wine was very well accepted by the regular consumers of wine and can be a very interesting product in the market.

  7. Supercooling Characteristics of Isolated Peach Flower Bud Primordia 1

    PubMed Central

    Rajashekar, C. B.

    1989-01-01

    The amount of unfrozen water in dormant peach (Prunus persica [L.] Batsch, cv Redhaven) flower buds, isolated primordia, and bud axes was determined during freezing using pulse nuclear magnetic resonance methods. Differential thermal analysis studies were conducted on whole buds and isolated primordia in the presence of ice nucleation. The results showed that some of the water in isolated primordia remained supercooled in the presence of ice nucleation. Although most tissue water froze (57.5%) following ice nucleation at −2.5°C, a considerable amount of water was found to supercool. In the presence of ice nucleation, increased hydration of isolated primordia resulted in the elimination of the supercooling characteristic. The structural integrity of isolated primordia appeared to be essential for supercooling. PMID:16666658

  8. Properties of Peach Flower Buds Which Facilitate Supercooling

    PubMed Central

    Ashworth, Edward N.

    1982-01-01

    Water in dormant peach (Prunus persica [L.] Batsch. var. `Harbrite') flower buds deep supercooled. Both supercooling and the freezing of water within the bud axis and primordium as distinct components depended on the viability of the bud axis tissue. The viability of the primordium was not critical. Supercooling was prevented by wounding buds with a dissecting needle, indicating that bud structural features were important. Bud morphological features appeared to prevent the propagation of ice through the vascular tissue and into the primordium. In dormant buds, procambial cells had not yet differentiated into xylem vessel elements. Xylem continuity between the bud primordium and adjacent tissues did not appear to be established until buds had deacclimated. It was concluded that structural, morphological, and physiological features of the bud facilitated supercooling. Images Fig. 3 Fig. 4 Fig. 5 PMID:16662701

  9. 76 FR 52357 - Exelon Generation Company, LLC; PSEG Nuclear, LLC; Peach Bottom Atomic Power Station, Unit 3...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-22

    ... transients. The amendment application is dated June 8, 2011 (ADAMS Accession No. ML111600180). Before... the Technical Specifications (TS), and their use to determine cycle specific thermal limits, has been... and during abnormal operational transients, at least 99.9% of all fuel rods in the core do...

  10. 75 FR 58445 - Exelon Generation Company, LLC; Peach Bottom Atomic Power Station Unit Nos. 2 and 3...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-09-24

    ... permit are needed. No effects on the aquatic or terrestrial habitat in the vicinity or the plant, or to... the plant. The licensee states that the documentation provided in the submitted exemption request for... increase in occupational or public radiation exposure. Therefore, there are no significant radiological...

  11. 78 FR 63506 - Exelon Generation Company, LLC; Peach Bottom Atomic Power Station, Units 2 and 3; Proposed...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-10-24

    ... transmission system. This will increase the strength of the electromagnetic field around the transmission lines... scientific consensus has not been reached on the chronic effects of the electromagnetic field on humans,...

  12. 76 FR 19476 - Exelon Generation Company, LLC, Peach Bottom Atomic Power Station, Unit Nos. 2 and 3; Exemption

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-04-07

    ... have also been installed in areas with 1-hour barrier walls and 1-hour rated electrical raceway... not required for any of the OMAs, with the exception of actions that require that an electrical... corporate safety procedure requires the use of additional electrical safety PPE when performing this task...

  13. 76 FR 29277 - Exelon Generation Company, LLC; Peach Bottom Atomic Power Station Unit Nos. 2 and 3...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-05-20

    ... the PBAPS Low-Level Radioactive Waste Storage Facility (LLRWSF). The proposed action is in accordance... waste disposal facility, located in Barnwell, has limited access to the facility from radioactive waste... Low-Level Radioactive Wastes at Power Reactor Sites,'' November 10, 1981, and to meet...

  14. Cell wall-related genes studies on peach cultivars with differential susceptibility to woolliness: looking for candidates as indicators of chilling tolerance.

    PubMed

    Genero, Melisa; Gismondi, Mauro; Monti, Laura L; Gabilondo, Julieta; Budde, Claudio O; Andreo, Carlos S; Lara, María V; Drincovich, María F; Bustamante, Claudia A

    2016-06-01

    The results obtained indicate that a β-xylosidase gene may act as good indicator of chilling tolerance and provide new insights into the complex issue of peach fruit woolliness. The storage of peaches at low temperatures for prolonged periods can induce a form of chilling injury (CI) called woolliness, characterized by a lack of juiciness and a mealy texture. As this disorder has been associated with abnormal cell wall dismantling, the levels of 12 transcripts encoding proteins involved in cell wall metabolism were analysed in cultivars with contrasting susceptibility to this disorder selected from five melting flesh peach cultivars. The resistant ('Springlady') and susceptible ('Flordaking') cultivars displayed differences in the level of expression of some of the selected genes during fruit softening and in woolly versus non-woolly fruits. From these genes, the level of expression of PpXyl, which encodes for a putative β-xylosidase, was the one that presented the highest correlation (negative) with the susceptibility to woolliness. PpXyl expression was also analysed in a cultivar ('Rojo 2') with intermediate susceptibility to woolliness, reinforcing the conclusion about the correlation of PpXyl expression to the presence of woolliness symptom. Moreover, the level of expression of PpXyl correlated to protein level detected by Western blot. Analyses of the promoter region of the PpXyl gene (1637 bp) isolated from the three cultivars showed no differences suggesting that cis-elements from other regions of the genome and/or trans elements could be responsible of the differential PpXyl expression patterns. Overall, the results obtained indicate that PpXyl may act as a good indicator of woolliness tolerance and that the regulation of expression of this gene in different cultivars does not depend on sequences upstream the coding sequence.

  15. Nanoelectronics from the bottom up.

    PubMed

    Lu, Wei; Lieber, Charles M

    2007-11-01

    Electronics obtained through the bottom-up approach of molecular-level control of material composition and structure may lead to devices and fabrication strategies not possible with top-down methods. This review presents a brief summary of bottom-up and hybrid bottom-up/top-down strategies for nanoelectronics with an emphasis on memories based on the crossbar motif. First, we will discuss representative electromechanical and resistance-change memory devices based on carbon nanotube and core-shell nanowire structures, respectively. These device structures show robust switching, promising performance metrics and the potential for terabit-scale density. Second, we will review architectures being developed for circuit-level integration, hybrid crossbar/CMOS circuits and array-based systems, including experimental demonstrations of key concepts such lithography-independent, chemically coded stochastic demultipluxers. Finally, bottom-up fabrication approaches, including the opportunity for assembly of three-dimensional, vertically integrated multifunctional circuits, will be critically discussed.

  16. Antioxidant capacities, phenolic compounds, carotenoids, and vitamin C contents of nectarine, peach, and plum cultivars from California.

    PubMed

    Gil, María I; Tomás-Barberán, Francisco A; Hess-Pierce, Betty; Kader, Adel A

    2002-08-14

    Genotypic variation in composition and antioxidant activity was evaluated using 25 cultivars, 5 each of white-flesh nectarines, yellow-flesh nectarines, white-flesh peaches, yellow-flesh peaches, and plums, at the ripe (ready-to-eat) stage. The ranges of total ascorbic acid (vitamin C) (in mg/100 g of fresh weight) were 5-14 (white-flesh nectarines), 6-8 (yellow-flesh nectarines), 6-9 (white-flesh peaches), 4-13 (yellow-flesh peaches), and 3-10 (plums). Total carotenoids concentrations (in microg/100 g of fresh weight) were 7-14 (white-flesh nectarines), 80-186 (yellow-flesh nectarines), 7-20 (white-flesh peaches), 71-210 (yellow-flesh peaches), and 70-260 (plums). Total phenolics (in mg/100 g of fresh weight) were 14-102 (white-flesh nectarines), 18-54 (yellow-flesh nectarines), 28-111 (white-flesh peaches), 21-61 (yellow-flesh peaches), and 42-109 (plums). The contributions of phenolic compounds to antioxidant activity were much greater than those of vitamin C and carotenoids. There was a strong correlation (0.93-0.96) between total phenolics and antioxidant activity of nectarines, peaches, and plums.

  17. Performance Prediction Model for Bottom Bounce Operation.

    DTIC Science & Technology

    ACOUSTIC ATTENUATION, *BOTTOM LOSS, *BOTTOM BOUNCE , PERFORMANCE(ENGINEERING), SIGNAL TO NOISE RATIO, ACOUSTIC DETECTION, MATHEMATICAL PREDICTION, COMPUTER APPLICATIONS, RAY TRACING, REVERBERATION, AMBIENT NOISE, SONAR.

  18. Unraveling the Mechanism Underlying the Glycosylation and Methylation of Anthocyanins in Peach1[C][W

    PubMed Central

    Cheng, Jun; Wei, Guochao; Zhou, Hui; Gu, Chao; Vimolmangkang, Sornkanok; Liao, Liao; Han, Yuepeng

    2014-01-01

    Modification of anthocyanin plays an important role in increasing its stability in plants. Here, six anthocyanins were identified in peach (Prunus persica), and their structural diversity is attributed to glycosylation and methylation. Interestingly, peach is quite similar to the wild species Prunus ferganensis but differs from both Prunus davidiana and Prunus kansueasis in terms of anthocyanin composition in flowers. This indicates that peach is probably domesticated from P. ferganensis. Subsequently, genes responsible for both methylation and glycosylation of anthocyanins were identified, and their spatiotemporal expression results in different patterns of anthocyanin accumulation in flowers, leaves, and fruits. Two tandem-duplicated genes encoding flavonoid 3-O-glycosyltransferase (F3GT) in peach, PpUGT78A1 and PpUGT78A2, showed different activity toward anthocyanin, providing an example of divergent evolution of F3GT genes in plants. Two genes encoding anthocyanin O-methyltransferase (AOMT), PpAOMT1 and PpAOMT2, are expressed in leaves and flowers, but only PpAOMT2 is responsible for the O-methylation of anthocyanins at the 3′ position in peach. In addition, our study reveals a novel branch of UGT78 genes in plants that lack the highly conserved intron 2 of the UGT gene family, with a great variation of the amino acid residue at position 22 of the plant secondary product glycosyltransferase box. Our results not only provide insights into the mechanisms underlying anthocyanin glycosylation and methylation in peach but will also aid in future attempts to manipulate flavonoid biosynthesis in peach as well as in other plants. PMID:25106821

  19. Increased levels of IAA are required for system 2 ethylene synthesis causing fruit softening in peach (Prunus persica L. Batsch).

    PubMed

    Tatsuki, Miho; Nakajima, Naoko; Fujii, Hiroshi; Shimada, Takehiko; Nakano, Michiharu; Hayashi, Ken-ichiro; Hayama, Hiroko; Yoshioka, Hirohito; Nakamura, Yuri

    2013-02-01

    The fruit of melting-flesh peach (Prunus persica L. Batsch) cultivars produce high levels of ethylene caused by high expression of PpACS1 (an isogene of 1-aminocyclopropane-1-carboxylic acid synthase), resulting in rapid fruit softening at the late-ripening stage. In contrast, the fruit of stony hard peach cultivars do not soften and produce little ethylene due to low expression of PpACS1. To elucidate the mechanism for suppressing PpACS1 expression in stony hard peaches, a microarray analysis was performed. Several genes that displayed similar expression patterns as PpACS1 were identified and shown to be indole-3-acetic acid (IAA)-inducible genes (Aux/IAA, SAUR). That is, expression of IAA-inducible genes increased at the late-ripening stage in melting flesh peaches; however, these transcripts were low in mature fruit of stony hard peaches. The IAA concentration increased suddenly just before harvest time in melting flesh peaches exactly coinciding with system 2 ethylene production. In contrast, the IAA concentration did not increase in stony hard peaches. Application of 1-naphthalene acetic acid, a synthetic auxin, to stony hard peaches induced a high level of PpACS1 expression, a large amount of ethylene production and softening. Application of an anti-auxin, α-(phenylethyl-2-one)-IAA, to melting flesh peaches reduced levels of PpACS1 expression and ethylene production. These observations indicate that suppression of PpACS1 expression at the late-ripening stage of stony hard peach may result from a low level of IAA and that a high concentration of IAA is required to generate a large amount of system 2 ethylene in peaches.

  20. Increased levels of IAA are required for system 2 ethylene synthesis causing fruit softening in peach (Prunus persica L. Batsch)

    PubMed Central

    Tatsuki, Miho

    2013-01-01

    The fruit of melting-flesh peach (Prunus persica L. Batsch) cultivars produce high levels of ethylene caused by high expression of PpACS1 (an isogene of 1-aminocyclopropane-1-carboxylic acid synthase), resulting in rapid fruit softening at the late-ripening stage. In contrast, the fruit of stony hard peach cultivars do not soften and produce little ethylene due to low expression of PpACS1. To elucidate the mechanism for suppressing PpACS1 expression in stony hard peaches, a microarray analysis was performed. Several genes that displayed similar expression patterns as PpACS1 were identified and shown to be indole-3-acetic acid (IAA)-inducible genes (Aux/IAA, SAUR). That is, expression of IAA-inducible genes increased at the late-ripening stage in melting flesh peaches; however, these transcripts were low in mature fruit of stony hard peaches. The IAA concentration increased suddenly just before harvest time in melting flesh peaches exactly coinciding with system 2 ethylene production. In contrast, the IAA concentration did not increase in stony hard peaches. Application of 1-naphthalene acetic acid, a synthetic auxin, to stony hard peaches induced a high level of PpACS1 expression, a large amount of ethylene production and softening. Application of an anti-auxin, α-(phenylethyl-2-one)-IAA, to melting flesh peaches reduced levels of PpACS1 expression and ethylene production. These observations indicate that suppression of PpACS1 expression at the late-ripening stage of stony hard peach may result from a low level of IAA and that a high concentration of IAA is required to generate a large amount of system 2 ethylene in peaches. PMID:23364941

  1. Elevated CO2 increases the abundance of the peach aphid on Arabidopsis by reducing jasmonic acid defenses.

    PubMed

    Sun, Yucheng; Guo, Huijuan; Zhu-Salzman, Keyan; Ge, Feng

    2013-09-01

    Rising atmospheric CO2 concentrations can affect the induced defense of plants against herbivory by chewing insects, but little is known about whether elevated CO2 can change the inducible defense of plants against herbivory by aphids, which are phloem-sucking rather than tissue-chewing insects. Interactions between the green peach aphid Myzus persicae and four isogenic Arabidopsis thaliana genotypes including wild type and three induced defense pathway deficient mutants were examined under ambient and elevated CO2. Our data showed that elevated CO2 increased the population abundance of peach aphid when reared on wild type and SA-deficient mutant plants. Regardless of aphid infestation, elevated CO2 decreased the jasmonic acid (JA) but increased the salicylic acid (SA) level in wild-type plants. In addition, elevated CO2 increased SA level in SA-deficient mutant while did not change the JA level in JA-deficient mutant. Pathway enrichment analysis based on high-throughput transcriptome sequencing suggested that CO2 level, aphid infestation, and their interactions (respectively) altered plant defense pathways. Furthermore, qPCR results showed that elevated CO2 up-regulated the expression of SA-dependent defense genes but down-regulated the expression of JA/ethylene-dependent defense genes in wild-type plants infested by aphids. The current study indicated that elevated CO2 tended to enhance the ineffective defense-SA signaling pathway and to reduce the effective defense-JA signaling pathway against aphids, which resulted in increased aphid numbers. Crown Copyright © 2013. Published by Elsevier Ireland Ltd. All rights reserved.

  2. A remarkable synergistic effect at the transcriptomic level in peach fruits doubly infected by prunus necrotic ringspot virus and peach latent mosaic viroid

    PubMed Central

    2013-01-01

    Background Microarray profiling is a powerful technique to investigate expression changes of large amounts of genes in response to specific environmental conditions. The majority of the studies investigating gene expression changes in virus-infected plants are limited to interactions between a virus and a model host plant, which usually is Arabidopsis thaliana or Nicotiana benthamiana. In the present work, we performed microarray profiling to explore changes in the expression profile of field-grown Prunus persica (peach) originating from Chile upon single and double infection with Prunus necrotic ringspot virus (PNRSV) and Peach latent mosaic viroid (PLMVd), worldwide natural pathogens of peach trees. Results Upon single PLMVd or PNRSV infection, the number of statistically significant gene expression changes was relatively low. By contrast, doubly-infected fruits presented a high number of differentially regulated genes. Among these, down-regulated genes were prevalent. Functional categorization of the gene expression changes upon double PLMVd and PNRSV infection revealed protein modification and degradation as the functional category with the highest percentage of repressed genes whereas induced genes encoded mainly proteins related to phosphate, C-compound and carbohydrate metabolism and also protein modification. Overrepresentation analysis upon double infection with PLMVd and PNRSV revealed specific functional categories over- and underrepresented among the repressed genes indicating active counter-defense mechanisms of the pathogens during infection. Conclusions Our results identify a novel synergistic effect of PLMVd and PNRSV on the transcriptome of peach fruits. We demonstrate that mixed infections, which occur frequently in field conditions, result in a more complex transcriptional response than that observed in single infections. Thus, our data demonstrate for the first time that the simultaneous infection of a viroid and a plant virus synergistically

  3. Genetic linkage maps of two apricot cultivars ( Prunus armeniaca L.) compared with the almond Texas x peach Earlygold reference map for Prunus.

    PubMed

    Lambert, P; Hagen, L S; Arus, P; Audergon, J M

    2004-04-01

    Several genetic linkage maps have been published in recent years on different Prunus species suggesting a high level of resemblance among the genomes of these species. One of these maps (Joobeur et al., Theor Appl Genet 97:1034-1041 [(1998); Aranzana et al., Theor Appl Genet 106:819-825 (2002b)] constructed from interspecific almond Texas x peach Earlygold F(2) progeny (TxE) was considered to be saturated. We selected 142 F(1) apricot hybrids obtained from a cross between P. armeniaca cvs. Polonais and Stark Early Orange for mapping. Eighty-eight RFLP probes and 20 peach SSR primer pairs used for the 'reference map' were selected to cover the eight linkage groups. One P. davidiana and an additional 14 apricot simple sequence repeats (SSRs) were mapped for the F(1) progeny. Eighty-three amplified fragment length polymorphisms were added in order to increase the density of the maps. Separate maps were made for each parent according to the 'double pseudo-testcross' model of analysis. A total of 141 markers were placed on the map of Stark Early Orange, defining a total length of 699 cM, and 110 markers were placed on the map of Polonais, defining a total length of 538 cM. Twenty-one SSRs and 18 restriction placed in the TxE map were heterozygous in both parents (anchor loci), thereby enabling the alignment of the eight homologous linkage groups of each map. Except for 15 markers, most markers present in each linkage group in apricot were aligned with those in TxE map, indicating a high degree of colinearity between the apricot genome and the peach and almond genomes. These results suggest a strong homology of the genomes between these species and probably between Prunophora and Amygdalus sub-genera.

  4. Co-localisation of host plant resistance QTLs affecting the performance and feeding behaviour of the aphid Myzus persicae in the peach tree

    PubMed Central

    Sauge, M-H; Lambert, P; Pascal, T

    2012-01-01

    The architecture and action of quantitative trait loci (QTL) contributing to plant resistance mechanisms against aphids, the largest group of phloem-feeding insects, are not well understood. Comparative mapping of several components of resistance to the green peach aphid (Myzus persicae) was undertaken in Prunus davidiana, a wild species related to peach. An interspecific F1 population of Prunus persica var. Summergrand × P. davidiana clone P1908 was scored for resistance (aphid colony development and foliar damage) and 17 aphid feeding behaviour traits monitored by means of the electrical penetration graph technique. Seven resistance QTLs were detected, individually explaining 6.1–43.1% of the phenotypic variation. Consistency was shown over several trials. Nine QTLs affecting aphid feeding behaviour were identified. All resistance QTLs except one co-located with QTLs underlying aphid feeding behaviour. A P. davidiana resistance allele at the major QTL was associated with drastic reductions in phloem sap ingestion by aphids, suggesting a phloem-based resistance mechanism. Resistance was also positively correlated with aphid salivation into sieve elements, suggesting an insect response to restore the appropriate conditions for ingestion after phloem occlusion. No significant QTL was found for traits characterising aphid mouthpart activity in plant tissues other than phloem vessels. Two QTLs with effects on aphid feeding behaviour but without effect on resistance were identified. SSR markers linked to the main QTLs involved in resistance are of potential use in marker-assisted selection for aphid resistance. Linking our results with the recent sequencing of the peach genome may help clarify the physiological resistance mechanisms. PMID:21897441

  5. Rice allergy demonstrated by double-blind placebo-controlled food challenge in peach-allergic patients is related to lipid transfer protein reactivity.

    PubMed

    Pastorello, Elide Anna; Scibilia, Joseph; Farioli, Laura; Primavesi, Laura; Giuffrida, Maria Gabriella; Mascheri, Ambra; Piantanida, Marta; Mirone, Corrado; Stafylaraki, Chrysi; Violetta, Marta Riva; Nichelatti, Michele; Preziosi, Donatella; Losappio, Laura; Pravettoni, Valerio

    2013-01-01

    The risk factors for sensitisation to rice and the involved allergens are still partially unknown. In this study we evaluated the clinically relevant aspects of rice allergy in DBPCF-positive patients, the major rice allergens, the severity of peach- and rice-induced symptoms in respect to Pru p 3 sensitisation and the role of anti-rPru p 3 IgE levels as a risk factor for rice allergy. In 148 peach-allergic subjects, patients with allergic reactions to rice and rice-positive serum IgE were selected. Symptoms were verified by double-blind placebo-controlled food challenges (DBPCFCs), performed at a maximum dosage of 25 g. Rice allergens, identified by IgE immunoblotting, were characterised by N-terminal amino acid sequencing. The relationship between anti-rPru p 3, 1 and 4 IgE levels and rice symptoms were statistically analysed. Eight out of 10 recruited rice-allergic patients had positive DBPCFCs, while 2 patients were not challenged due to their previously documented severe reactions. All patients with rice-induced symptoms were Pru p 3 positive and presented with higher anti-rPru p 3 levels than the rice-sensitised but tolerant patients. A 9-kDa lipid transfer protein, which was highly homologous to Pru p 3, was identified as the major rice allergen and elicited a positive response in all of the patients. Five patients reacted to a putative 15- to 17-kDa rice allergenic protein, and 3 patients reacted to an [alpha]-amylase/subtilisin inhibitor that was approximately 20 kDa. Rarely, allergic reactions to rice can arise in patients with peach allergies who are sensitised to Pru p 3, particularly in patients with high anti-rPru p 3 IgE levels. Copyright © 2013 S. Karger AG, Basel.

  6. Accumulation of carotenoids and expression of carotenogenic genes in peach fruit.

    PubMed

    Cao, Shifeng; Liang, Minhua; Shi, Liyu; Shao, Jiarong; Song, Chunbo; Bian, Kun; Chen, Wei; Yang, Zhenfeng

    2017-01-01

    To understand better the regulatory mechanism of the carotenoid accumulation, the expression profile of relevant carotenoid genes and metabolites were compared between two peach cultivars with different colors during fruit development. Meanwhile, the change pattern of carotenoid content and expression of carotenoid metabolic genes in peaches after harvest in response to blue light were also investigated. As compared to the yellow fleshed-cultivar 'Jinli', lower carotenoid levels were observed in skin and pulp in white peach cultivar 'Hujing', which might be explained by differentially expression of PpCCD4 gene. With respect to 'Jinli', the carotenoid accumulation during fruit development in fruit skin was partially linked with the transcriptional regulation of PpFPPS, PpGGPS, PpLCYB and PpCHYB. However, in the pulp, the accumulation might be also associated with the increased transcriptions of PpPDS, along with the above four genes. Blue light treatment induced carotenoid accumulation in 'Jinli' peaches during storage. In addition, the treated-fruit displayed higher expression of all the eight genes analysed with a lesser extent on PpCCD4, which suggested that the much more increased carotenoid synthesis rate could result in the higher carotenoid content in blue light-treated fruit. The results presented herein contribute to further elucidating the regulatory mechanism of carotenoid accumulation in peach fruit.

  7. Identification of key odor volatile compounds in the essential oil of nine peach accessions.

    PubMed

    Eduardo, Iban; Chietera, Giorgiana; Bassi, Daniele; Rossini, Laura; Vecchietti, Alberto

    2010-05-01

    Volatile compounds, together with sugars and acids, are the main chemical species determining the characteristic aroma and flavor of food. In peach, more than 100 volatiles have been identified. The essential oil of six peach and three nectarine accessions used in Italian breeding programs was obtained by steam distillation, and the volatiles were investigated. A total of 47 known volatiles, two unidentified compounds and nine hydrocarbons were identified, including 12 aldehydes, six alcohols, three acids, three esters, six terpenes, two phenylalanine derivates, two C(13) norisoprenoids, one ketone (C(9)) and 10 lactones. A wide variation in the number of volatiles and in their concentration was observed among the nine accessions. Twenty-one compounds presented odor activity values (OAVs) higher than 1 in at least one of the accessions and were therefore putatively considered as key odorants in the peach volatile composition. This study reports the identification, quantification and potency, based on the OAVs, of the most important volatile compounds, along with fruit quality characteristics, of nine different peach/nectarine accessions and will help future peach volatile breeding programs for the selection of odor-rich accessions to be used in the development of new improved cultivars.

  8. Genetic analysis identifies the region of origin of smuggled peach palm seeds.

    PubMed

    Cristo-Araújo, Michelly; Molles, David Bronze; Rodrigues, Doriane Picanço; Clement, Charles R

    2017-04-01

    Seeds of a plant, supposedly a palm tree known popularly as peach palm (Bactris gasipaes), were seized by the Federal Police in the state of Pará, Brazil, without documentation of legal origin to authorize transportation and marketing in Brazil. They were alleged to be from the western part of Amazonas, Brazil, near the frontier with Peru and Colombia, justifying the lack of documentation. The species was confirmed to be peach palm. To determine the likely place of origin, a genetic analysis was performed to determine the relationship between the seized seeds and representative populations of peach palm from all of Amazonia, maintained in the Peach palm Core Collection, at the National Research Institute for Amazonia, using nine microsatellite loci. Reynolds' coancestry analysis showed a strong relationship between the seeds and the Pampa Hermosa landrace, around Yurimaguas, Peru. The Structure program, used to infer the probability of an individual belonging to a given population, showed that most seeds grouped with populations close to Yurimaguas, Peru, corroborating the coancestry analysis. The Pampa Hermosa landrace is the main source of spineless peach palm seeds used in the Brazilian heart-of-palm agribusiness, which motivated the smugglers to attempt this biopiracy. Copyright © 2017 Elsevier B.V. All rights reserved.

  9. Agronomical parameters, sugar profile and antioxidant compounds of "Catherine" peach cultivar influenced by different plum rootstocks.

    PubMed

    Font i Forcada, Carolina; Gogorcena, Yolanda; Moreno, María Ángeles

    2014-02-03

    The influence of seven plum rootstocks (Adesoto, Monpol, Montizo, Puebla de Soto 67 AD, PM 105 AD, St. Julien GF 655/2 and Constantí 1) on individual and total sugars, as well as on antioxidant content in fruit flesh of "Catherine" peaches, was evaluated for three years. Agronomical and basic fruit quality parameters were also determined. At twelve years after budding, significant differences were found between rootstocks for the different agronomic and fruit quality traits evaluated. The Pollizo plum rootstocks Adesoto and PM 105 AD seem to induce higher sweetness to peach fruits, based on soluble solids content, individual (sucrose, fructose and sorbitol) and total sugars. A clear tendency was also observed with the rootstock Adesoto, inducing the highest content of phenolics, flavonoids, vitamin C and relative antioxidant capacity (RAC). Thus, the results of this study demonstrate the significant effect of rootstock on the sugar profile and phytochemical characteristics of peach fruits. In addition, this work shows the importance of the sugar profile, because specific sugars play an important role in peach flavour quality, as well as the studied phytochemical compounds when looking for high quality peaches with enhanced health properties.

  10. Carbon Monoxide Fumigation Improved the Quality, Nutrients, and Antioxidant Activities of Postharvest Peach

    PubMed Central

    Li, Ying; Pei, Fei

    2014-01-01

    Peaches (Prunus persica cv. Yanhong) were fumigated with carbon monoxide (CO) at 0, 0.5, 5, 10, and 20 μmol/L for 2 hours. The result showed that low concentration CO (0.5–10 μmol/L) might delay the decrease of firmness and titrable acid content, restrain the increase of decay incidence, and postpone the variation of soluble solids content, but treating peaches with high concentration CO (20 μmol/L) demonstrated adverse effects. Further research exhibited that exogenous CO could induce the phenylalnine ammonialyase activity, maintain nutrient contents such as Vitamin C, total flavonoid, and polyphenol, and enhance antioxidant activity according to reducing power and 2,2-diphenyl-1-(2,4,6-trinitrophenyl) hydrazyl radical scavenging activity. Treating peaches with appropriate concentration CO was beneficial to the quality, nutrients, and antioxidant activity of postharvest peaches during storage time. Therefore, CO fumigation might probably become a novel method to preserve postharvest peach and other fruits in the future. PMID:26904651

  11. Peach (Prunus persica) extract inhibits angiotensin II-induced signal transduction in vascular smooth muscle cells.

    PubMed

    Kono, Ryohei; Okuno, Yoshiharu; Nakamura, Misa; Inada, Ken-ichi; Tokuda, Akihiko; Yamashita, Miki; Hidaka, Ryu; Utsunomiya, Hirotoshi

    2013-08-15

    Angiotensin II (Ang II) is a vasoactive hormone that has been implicated in cardiovascular diseases. Here, the effect of peach, Prunus persica L. Batsch, pulp extract on Ang II-induced intracellular Ca(2+) mobilization, reactive oxygen species (ROS) production and signal transduction events in cultured vascular smooth muscle cells (VSMCs) was investigated. Pretreatment of peach ethyl acetate extract inhibited Ang II-induced intracellular Ca(2+) elevation in VSMCs. Furthermore, Ang II-induced ROS generation, essential for signal transduction events, was diminished by the peach ethyl acetate extract. The peach ethyl acetate extract also attenuated the Ang II-induced phosphorylation of epidermal growth factor receptor and myosin phosphatase target subunit 1, both of which are associated with atherosclerosis and hypertension. These results suggest that peach ethyl acetate extract may have clinical potential for preventing cardiovascular diseases by interfering with Ang II-induced intracellular Ca(2+) elevation, the generation of ROS, and then blocking signal transduction events. Copyright © 2013 Elsevier Ltd. All rights reserved.

  12. Peach leaf curl disease shifts sugar metabolism in severely infected leaves from source to sink.

    PubMed

    Moscatello, Stefano; Proietti, Simona; Buonaurio, Roberto; Famiani, Franco; Raggi, Vittorio; Walker, Robert P; Battistelli, Alberto

    2017-03-01

    Peach leaf curl is a disease that affects the leaves of peach trees, and in severe cases all of the leaf can be similarly affected. This study investigated some effects of this disease on the metabolism of peach leaves in which all parts of the leaf were infected. These diseased leaves contained very little chlorophyll and performed little or no photosynthesis. Compared to uninfected leaves, diseased leaves possessed higher contents of fructose and especially glucose, but lowered contents of sucrose, sorbitol and especially starch. The activities of soluble acid invertase, neutral invertase, sorbitol dehydrogenase and sucrose synthase were all higher in diseased leaves, whereas, those of aldose-6-phosphate reductase and sucrose phosphate synthase were lower. The activities of hexokinase and fructokinase were little changed. In addition, immunblots showed that the contents of Rubisco and ADP-glucose phosphorylase were reduced in diseased leaves, whereas, the content of phosphoenolpyruvate carboxylase was increased. The results show that certain aspects of the metabolism of diseased leaves are similar to immature sink leaves. That is photosynthetic function is reduced, the leaf imports rather than exports sugars, and the contents of non-structural carbohydrates and enzymes involved in their metabolism are similar to sink leaves. Further, the effects of peach leaf curl on the metabolism of peach leaves are comparable to the effects of some other diseases on the metabolism of photosynthetic organs of other plant species. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

  13. Effect of post-harvest heat treatment on proteome change of peach fruit during ripening.

    PubMed

    Zhang, Li; Yu, Zhifang; Jiang, Li; Jiang, Juan; Luo, Haibo; Fu, Linran

    2011-06-10

    The extracted proteins from the heat-treated peach fruit (dipped in hot water at 48°C for 10min and then stored at room temperature (20°C-25°C) for up to 6 days) were used for proteomic analysis in order to understand the response of post-harvest peach fruit to heat treatment during ripening stage at proteomic level. After two dimensional gels electrophoresis (2-DE) was conducted, more than 600 protein spots were detected. Among them, 35 differently expressed spots (P<0.05) were selected to be excised and analyzed using MALDI-TOF/TOF, and finally 30 protein spots were confidently identified according to NCBI database. The results demonstrated that among the thirty protein spots expressed particularly induced by heat treatment, 43% were related to stress response, 17% to cell structure, 13% to protein fate, 7% to glycolytic pathway, 3% to ripening and senescence and 17% to unclassified. All of them are involved in the regulation of peach fruit development and ripening. All these indicated that the self-defense capability of peach fruit was improved by heat treatment. The study will enable future detailed investigation of gene expression and function linked with peach fruit ripening. Copyright © 2011 Elsevier B.V. All rights reserved.

  14. Differential Metabolic Rearrangements after Cold Storage Are Correlated with Chilling Injury Resistance of Peach Fruits

    PubMed Central

    Bustamante, Claudia A.; Monti, Laura L.; Gabilondo, Julieta; Scossa, Federico; Valentini, Gabriel; Budde, Claudio O.; Lara, María V.; Fernie, Alisdair R.; Drincovich, María F.

    2016-01-01

    Reconfiguration of the metabolome is a key component involved in the acclimation to cold in plants; however, few studies have been devoted to the analysis of the overall metabolite changes after cold storage of fruits prior to consumption. Here, metabolite profiling of six peach varieties with differential susceptibility to develop mealiness, a chilling-injury (CI) symptom, was performed. According to metabolic content at harvest; after cold treatment; and after ripening, either following cold treatment or not; peach fruits clustered in distinct groups, depending on harvest-time, cold treatment, and ripening state. Both common and distinct metabolic responses among the six varieties were found; common changes including dramatic galactinol and raffinose rise; GABA, Asp, and Phe increase; and 2-oxo-glutarate and succinate decrease. Raffinose content after long cold treatment quantitatively correlated to the degree of mealiness resistance of the different peach varieties; and thus, raffinose emerges as a candidate biomarker of this CI disorder. Xylose increase after cold treatment was found only in the susceptible genotypes, indicating a particular cell wall reconfiguration of these varieties while being cold-stored. Overall, results indicate that peach fruit differential metabolic rearrangements due to cold treatment, rather than differential metabolic priming before cold, are better related with CI resistance. The plasticity of peach fruit metabolism renders it possible to induce a diverse metabolite array after cold, which is successful, in some genotypes, to avoid CI. PMID:27746802

  15. Comparative Physiological and Proteomic Analysis Reveal Distinct Regulation of Peach Skin Quality Traits by Altitude

    PubMed Central

    Karagiannis, Evangelos; Tanou, Georgia; Samiotaki, Martina; Michailidis, Michail; Diamantidis, Grigorios; Minas, Ioannis S.; Molassiotis, Athanassios

    2016-01-01

    The role of environment in fruit physiology has been established; however, knowledge regarding the effect of altitude in fruit quality traits is still lacking. Here, skin tissue quality characters were analyzed in peach fruit (cv. June Gold), harvested in 16 orchards located in low (71.5 m mean), or high (495 m mean) altitutes sites. Data indicated that soluble solids concentration and fruit firmness at commercial harvest stage were unaffected by alitute. Peach grown at high-altitude environment displayed higher levels of pigmentation and specific antioxidant-related activity in their skin at the commercial harvest stage. Skin extracts from distinct developmental stages and growing altitudes exhibited different antioxidant ability against DNA strand-scission. The effects of altitude on skin tissue were further studied using a proteomic approach. Protein expression analysis of the mature fruits depicted altered expression of 42 proteins that are mainly involved in the metabolic pathways of defense, primary metabolism, destination/storage and energy. The majority of these proteins were up-regulated at the low-altitude region. High-altitude environment increased the accumulation of several proteins, including chaperone ClpC, chaperone ClpB, pyruvate dehydrogenase E1, TCP domain class transcription factor, and lipoxygenase. We also discuss the altitude-affected protein variations, taking into account their potential role in peach ripening process. This study provides the first characterization of the peach skin proteome and helps to improve our understanding of peach's response to altitude. PMID:27891143

  16. Differential Metabolic Rearrangements after Cold Storage Are Correlated with Chilling Injury Resistance of Peach Fruits.

    PubMed

    Bustamante, Claudia A; Monti, Laura L; Gabilondo, Julieta; Scossa, Federico; Valentini, Gabriel; Budde, Claudio O; Lara, María V; Fernie, Alisdair R; Drincovich, María F

    2016-01-01

    Reconfiguration of the metabolome is a key component involved in the acclimation to cold in plants; however, few studies have been devoted to the analysis of the overall metabolite changes after cold storage of fruits prior to consumption. Here, metabolite profiling of six peach varieties with differential susceptibility to develop mealiness, a chilling-injury (CI) symptom, was performed. According to metabolic content at harvest; after cold treatment; and after ripening, either following cold treatment or not; peach fruits clustered in distinct groups, depending on harvest-time, cold treatment, and ripening state. Both common and distinct metabolic responses among the six varieties were found; common changes including dramatic galactinol and raffinose rise; GABA, Asp, and Phe increase; and 2-oxo-glutarate and succinate decrease. Raffinose content after long cold treatment quantitatively correlated to the degree of mealiness resistance of the different peach varieties; and thus, raffinose emerges as a candidate biomarker of this CI disorder. Xylose increase after cold treatment was found only in the susceptible genotypes, indicating a particular cell wall reconfiguration of these varieties while being cold-stored. Overall, results indicate that peach fruit differential metabolic rearrangements due to cold treatment, rather than differential metabolic priming before cold, are better related with CI resistance. The plasticity of peach fruit metabolism renders it possible to induce a diverse metabolite array after cold, which is successful, in some genotypes, to avoid CI.

  17. 76 FR 31888 - Nectarines and Fresh Peaches Grown in California; Termination of Marketing Order 916 and the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-06-02

    ... Agricultural Marketing Service 7 CFR Parts 916 and 917 Nectarines and Fresh Peaches Grown in California; Termination of Marketing Order 916 and the Peach Provisions of Marketing Order 917 AGENCY: Agricultural Marketing Service, USDA. ACTION: Proposed rule. SUMMARY: This rule invites comments on the proposed...

  18. 76 FR 66602 - Nectarines and Fresh Peaches Grown in California; Termination of Marketing Order 916 and the...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-27

    ... Agricultural Marketing Service 7 CFR Parts 916 and 917 Nectarines and Fresh Peaches Grown in California; Termination of Marketing Order 916 and the Peach Provisions of Marketing Order 917 AGENCY: Agricultural Marketing Service, USDA. ACTION: Final rule, termination of order. SUMMARY: This final rule terminates the...

  19. Mapping transcript start sites for three peach (Prunus persica L., Batsch) dehydrins: differences in transcript initiation during fruit development

    USDA-ARS?s Scientific Manuscript database

    A number of stress-responsive genes are expressed during fruit ripening in several different crops, including tomato, pepper, grape, and peach. In peach, a dehydrin shown to be up-regulated in bark in response to cold, PpDhn3, was also found to be highly abundant in ripe fruit. Two other dehydrins...

  20. Use of spirotetramat in the post-plant management of root-knot nematode in eggplant and peach

    USDA-ARS?s Scientific Manuscript database

    Historically peach production and IPM management of nematodes has relied almost solely on pre- and post-plant applications of nematicides in the southeastern United States. Currently Telone II is the primary preplant fumigant used by peach growers, since methyl bromide and fenamiphos, the only post...

  1. Science and Math Explorations for Young Children: A GEMS/PEACHES Handbook for Early Childhood Educators, Childcare Providers, and Parents.

    ERIC Educational Resources Information Center

    Barrett, Katharine; Blinderman, Ellen; Boffen, Beatrice; Echols, Jean; House, Patricia A.; Hosoume, Kimi; Kopp, Jaine

    This handbook is designed to help readers understand the educational philosophy and practice of the PEACHES (Primary Explorations for Children and Educators in Science) and GEMS (Great Explorations in Math and Science) programs, and to assist in using GEMS/PEACHES teachers' guides in schools and child care centers. The handbook outlines techniques…

  2. Emerging insect problems in peach: A new look at root-feeding weevils and the lesser peachtree borer

    USDA-ARS?s Scientific Manuscript database

    Although the fruit-attacking plum curculio remains the primary pest of peach production across the Southeastern Unites States, other insect pests that attack the peach tree can inflict serious economic losses. Some of these other pests, such as scale insects and the peachtree borer, are common pest...

  3. Peach is an occasional host for Rhagoletis pomonella (Walsh, 1867) (Diptera: Tephritidae) larvae in Western Washington State, USA

    USDA-ARS?s Scientific Manuscript database

    Peach, Prunus persica (L.) Batsch (Rosaceae), has been reported to be a host of the apple maggot fly, Rhagoletis pomonella (Walsh), 1867 (Diptera: Tephritidae), an important quarantine pest of apple (Malus domestica Borkhausen) (Rosaceae) in the western U.S.A. However, all reports of peach as a hos...

  4. Observation and identification of wood-decay fungi from the heartwood of peach tree limbs in central Georgia, USA

    USDA-ARS?s Scientific Manuscript database

    Discoloration in the heartwood of broken peach scaffold limbs was observed consistently on otherwise apparently healthy limbs in peach orchards in central Georgia, USA. A dissection of broken scaffolds from 6 trees showed symptoms of colonization along the entire limbs, with 41% of primary branches ...

  5. Antennal transcriptome and differential expression of olfactory genes in the yellow peach moth, Conogethes punctiferalis (Lepidoptera: Crambidae)

    PubMed Central

    Jia, Xiao-Jian; Wang, Hai-Xiang; Yan, Zeng-Guang; Zhang, Min-Zhao; Wei, Chun-Hua; Qin, Xiao-Chun; Ji, Wei-Rong; Falabella, Patrizia; Du, Yan-Li

    2016-01-01

    The yellow peach moth (YPM), Conogethes punctiferalis (Guenée), is a multivoltine insect pest of crops and fruits. Antennal-expressed receptors are important for insects to detect olfactory cues for host finding, mate attraction and oviposition site selection. However, few olfactory related genes were reported in YPM until now. In the present study, we sequenced and characterized the antennal transcriptomes of male and female YPM. In total, 15 putative odorant binding proteins (OBPs), 46 putative odorant receptors (ORs) and 7 putative ionotropic receptors (IRs) were annotated and identified as olfactory-related genes of C. punctiferalis. Further analysis of RT-qPCR revealed that all these olfactory genes are primarily or uniquely expressed in male and female antennae. Among which, 3 OBPs (OBP4, OBP8 and PBP2) and 4 ORs (OR22, OR26, OR44 and OR46) were specially expressed in male antennae, whereas 4 ORs (OR5, OR16, OR25 and OR42) were primarily expressed in female antennae. The predicted protein sequences were compared with homologs in other lepidopteran species and model insects, which showed high sequence homologies between C. punctiferalis and O. furnacalis. Our work allows for further functional studies of pheromone and general odorant detection genes, which might be meaningful targets for pest management. PMID:27364081

  6. Susceptibility of peach GF 305 seedlings and selected herbaceous plants to plum pox virus isolates from western Slovakia.

    PubMed

    Glasa, M; Matisová, J; Hricovský, I; Kúdela, O

    1997-12-01

    The susceptibility of peach GF 305 seedlings and herbaceous plants to five plum pox virus (PPV) isolates from orchards of western Slovakia was investigated. PPV was isolated from diseased plum, apricot and peach trees, and transmitted by chip-budding to peach GF 305. The herbaceous plants were infected by mechanical inoculation. The transmission was analysed by symptomatology and double sandwich enzyme-linked immunosorbent assay (DAS-ELISA). Infected peaches developed leaf distortion, tissue clearing along the veins and small chlorotic spots (isolate BOR-3). With exception of BOR-3, the PPV isolates transmitted from peach caused local chlorotic spots on Chenopodium foetidum. The character of symptoms changed when a sap from PPV-infected Nicotiana benthamiana was used as virus inoculum. From N. benthamiana, the PPV isolates could be transmitted to Pisum sativum, cv. Colmo (light green mosaic), N. clevelandii and N. clevelandii x N. glutinosa hybrid (latent infection or chlorotic spots).

  7. Toxoplasmosis in a Pet Peach-Faced Lovebird (Agapornis roseicollis)

    PubMed Central

    Cooper, Madalyn K.; Šlapeta, Jan; Donahoe, Shannon L.; Phalen, David N.

    2015-01-01

    Toxoplasma gondii atypical type II genotype was diagnosed in a pet peach-faced lovebird (Agapornis roseicollis) based on histopathology, immunohistochemistry, and multilocus DNA typing. The bird presented with severe neurological signs, and hematology was suggestive of chronic granulomatous disease. Gross post-mortem examination revealed cerebral hemorrhage, splenomegaly, hepatitis, and thickening of the right ventricular free wall. Histologic sections of the most significant lesions in the brain revealed intralesional protozoan organisms associated with malacia, spongiform changes, and a mild histiocytic response, indicative of diffuse, non-suppurative encephalitis. Immunohistochemistry confirmed the causative organisms to be T. gondii. DNA isolated from the brain was used to confirm the presence of T. gondii DNA. Multilocus genotyping based on SAG1, altSAG2, SAG3, BTUB, GRA6, c22-8, c29-2, L358, PK1, and Apico markers demonstrated the presence of ToxoDB PCR-RFLP genotype #3 and B1 gene as atypical T. gondii type II. The atypical type II strain has been previously documented in Australian wildlife, indicating an environmental transmission route. PMID:26797444

  8. Toxoplasmosis in a Pet Peach-Faced Lovebird (Agapornis roseicollis).

    PubMed

    Cooper, Madalyn K; Šlapeta, Jan; Donahoe, Shannon L; Phalen, David N

    2015-12-01

    Toxoplasma gondii atypical type II genotype was diagnosed in a pet peach-faced lovebird (Agapornis roseicollis) based on histopathology, immunohistochemistry, and multilocus DNA typing. The bird presented with severe neurological signs, and hematology was suggestive of chronic granulomatous disease. Gross post-mortem examination revealed cerebral hemorrhage, splenomegaly, hepatitis, and thickening of the right ventricular free wall. Histologic sections of the most significant lesions in the brain revealed intralesional protozoan organisms associated with malacia, spongiform changes, and a mild histiocytic response, indicative of diffuse, non-suppurative encephalitis. Immunohistochemistry confirmed the causative organisms to be T. gondii. DNA isolated from the brain was used to confirm the presence of T. gondii DNA. Multilocus genotyping based on SAG1, altSAG2, SAG3, BTUB, GRA6, c22-8, c29-2, L358, PK1, and Apico markers demonstrated the presence of ToxoDB PCR-RFLP genotype #3 and B1 gene as atypical T. gondii type II. The atypical type II strain has been previously documented in Australian wildlife, indicating an environmental transmission route.

  9. Modeling the response of peach fruit growth to water stress.

    PubMed

    Génard, M; Huguet, J G

    1996-04-01

    We applied a semi-mechanistic model of fresh matter accumulation to peach fruit during the stage of rapid mesocarp development. The model, which is based on simple hypotheses of fluid flows into and out of the fruit, assumes that solution flow into the fruit increases with fruit weight and transpiration per unit weight, and decreases with the maximum daily shrinkage of the trunk, which was used as an indicator of water stress. Fruit transpiration was assumed to increase with fruit size and with radiation. Fruit respiration was considered to be related to fruit growth and to temperature. The model simulates variability in growth among fruits according to climatic conditions, degree of water stress and weight of the fruit at the beginning of the simulation. We used data obtained from well-watered and water-stressed trees grown in containers to estimate model parameters and to test the model. There was close agreement between the simulated and measured values. A sensitivity analysis showed that initial fruit weight partly determined the variation in growth among fruits. The analysis also indicated that there was an optimal irradiance for fruit growth and that the effect of high global radiation on growth varied according to the stage of fruit development. Water stress, which was the most important factor influencing fruit growth, rapidly depressed growth, particularly when applied late in the season.

  10. Modeling Carbon Export Out of Mature Peach Leaves.

    PubMed Central

    Moing, A.; Escobar-Gutierrez, A.; Gaudillere, J. P.

    1994-01-01

    The characteristics of sorbitol and sucrose export out of mature leaves in seedlings of peach (Prunus persica L. Batsch cv GF 305) were investigated by simulating carbon fluxes through the leaf. Three treatments were employed: a control treatment and two treatments modifying leaf export, the latter using either shading or girdling. Photosynthesis and 14C partitioning into sorbitol and sucrose were measured during carbohydrate pool buildup at the beginning of the photoperiod, and the export rate of sorbitol and sucrose was modeled using a PSPICE (Simulation Program with Integrated Circuit Emphasis) simulator. The simulation allowed prediction of the resulting sorbitol and sucrose contents, which were compared to experimental carbohydrate contents. The apparent Km for sorbitol and sucrose phloem loading, estimated by carbon flux modeling, was 6.6 and 4 mol m-3, respectively. The predicted export capacity of the leaf, characterized by the estimated Vmax values for phloem loading of sorbitol and sucrose, was similar to the photosynthetic carbon flux measured under the leaf growth conditions. This export capacity was enhanced in plants in which all leaves except those studied were shaded. The mature leaf had a higher storage capacity for sorbitol than for sucrose in control plants, especially in the girdled treatment. Sucrose content appears to be tightly regulated. PMID:12232352

  11. Peach leaf responses to soil and cement dust pollution.

    PubMed

    Maletsika, Persefoni A; Nanos, George D; Stavroulakis, George G

    2015-10-01

    Dust pollution can negatively affect plant productivity in hot, dry and with high irradiance areas during summer. Soil or cement dust were applied on peach trees growing in a Mediterranean area with the above climatic characteristics. Soil and cement dust accumulation onto the leaves decreased the photosynthetically active radiation (PAR) available to the leaves without causing any shade effect. Soil and mainly cement dust deposition onto the leaves decreased stomatal conductance, photosynthetic and transpiration rates, and water use efficiency due possibly to stomatal blockage and other leaf cellular effects. In early autumn, rain events removed soil dust and leaf functions partly recovered, while cement dust created a crust partially remaining onto the leaves and causing more permanent stress. Leaf characteristics were differentially affected by the two dusts studied due to their different hydraulic properties. Leaf total chlorophyll decreased and total phenol content increased with dust accumulation late in the summer compared to control leaves due to intense oxidative stress. The two dusts did not cause serious metal imbalances to the leaves, except of lower leaf K content.

  12. Building from the Bottom Up

    DTIC Science & Technology

    2003-05-01

    through billions of years of prebiotic and molecular selection and evolution, there are bio-organic by Shuguang Zhang Building from the bottom up... Health , Du Pont-MIT Alliance, and the Whitaker Foundation. I also gratefully acknowledge Intel Corporation Academic Program for the generous donation

  13. "Bottom-up" transparent electrodes.

    PubMed

    Morag, Ahiud; Jelinek, Raz

    2016-11-15

    Transparent electrodes (TEs) have attracted significant scientific, technological, and commercial interest in recent years due to the broad and growing use of such devices in electro-optics, consumer products (touch-screens for example), solar cells, and others. Currently, almost all commercial TEs are fabricated through "top-down" approaches (primarily lithography-based techniques), with indium tin oxide (ITO) as the most common material employed. Several problems are encountered, however, in this field, including the cost and complexity of TE production using top-down technologies, the limited structural flexibility, high-cost of indium, and brittle nature and low transparency in the far-IR spectral region of ITO. Alternative routes based upon bottom-up processes, have recently emerged as viable alternatives for production of TEs. Bottom up technologies are based upon self-assembly of building blocks - atoms, molecules, or nanoparticles - generating thin patterned films that exhibit both electrical conductivity and optical transparency. In this Feature Article we discuss the recent progress in this active and exciting field, including bottom-up TE systems produced from carbon materials (carbon nanotubes, graphene, graphene-oxide), silver, gold, and other metals. The current hurdles encountered for broader use of bottom-up strategies along with their significant potential are analyzed.

  14. Culture from the Bottom Up

    ERIC Educational Resources Information Center

    Atkinson, Dwight; Sohn, Jija

    2013-01-01

    The culture concept has been severely criticized for its top-down nature in TESOL, leading arguably to its falling out of favor in the field. But what of the fact that people do "live culturally" (Ingold, 1994)? This article describes a case study of culture from the bottom up--culture as understood and enacted by its individual users.…

  15. Culture from the Bottom Up

    ERIC Educational Resources Information Center

    Atkinson, Dwight; Sohn, Jija

    2013-01-01

    The culture concept has been severely criticized for its top-down nature in TESOL, leading arguably to its falling out of favor in the field. But what of the fact that people do "live culturally" (Ingold, 1994)? This article describes a case study of culture from the bottom up--culture as understood and enacted by its individual users.…

  16. Reproduction and Development of Meloidogyne incognita and M. javanica on Guardian Peach Rootstock

    PubMed Central

    Nyczepir, A. P.; Beckman, T. G.; Reighard, G. L.

    1999-01-01

    Guardian peach rootstock was evaluated for susceptibility to Meloidogyne incognita race 3 (Georgia-peach isolate) and M. javanica in the greenhouse. Both commercial Guardian seed sources produced plants that were poor hosts of M. incognita and M. javanica. Reproduction as measured by number of egg masses and eggs per plant, eggs per egg mass, and eggs per gram of root were a better measure of host resistance than number of root galls per plant. Penetration, development, and reproduction of M. incognita in Guardian (resistant) and Lovell (susceptible) peach were also studied in the greenhouse. Differences in susceptibility were not attributed to differential penetration by the infectivestage juveniles (J2) or the number of root galls per plant. Results indicated that M. incognita J2 penetrated Guardian roots and formed galls, but that the majority of the nematodes failed to mature and reproduce. PMID:19270905

  17. The Synthesis and Characterization of Peach-Like ZnO

    NASA Astrophysics Data System (ADS)

    Kamalianfar, A.; A. Halim, S.; Siamak Pilban, Jahromi; Navasery, M.; Fasih, Ud Din; P. Lim, K.; K. Chen, S.; A. M. Zahedi, J.

    2012-12-01

    Peach-like ZnO microstructures are synthesized using vapor phase transport on MgO (001) substrates with a copper oxide (60 nm) buffer layer. The structure and morphology of the product are investigated using an x-ray diffractometer (XRD) and a field-emission scanning electron microscope. The peaches have an average diameter of 3 μm and a wurtzite structure. To study the optical properties, photoluminescence (PL) and Raman spectroscopy are employed. A strong UV emission at 380 nm in the PL spectra is observed, and a sharp and dominant peak at 437 cm-1 in the Raman spectrum can be assigned to the good crystallization of obtained product. In addition, the growth mechanism of the peach-like ZnO structure is tentatively investigated based on the EDX analysis and growth time.

  18. A decision support system for delivering optimal quality peach and tomato

    NASA Technical Reports Server (NTRS)

    Thai, C. N.; Pease, J. N.; Shewfelt, R. L.

    1990-01-01

    Several studies have indicated that color and firmness are the two quality attributes most important to consumers in making purchasing decisions of fresh peaches and tomatoes. However, at present, retail produce managers do not have the proper information for handling fresh produce so it has the most appealing color and firmness when it reaches the consumer. This information should help them predict the consumer color and firmness perception and preference for produce from various storage conditions. Since 1987, for 'Redglobe' peach and 'Sunny' tomato, we have been generating information about their physical quality attributes (firmness and color) and their corresponding consumer sensory scores. This article reports on our current progress toward the goal of integrating such information into a model-based decision support system for retail level managers in handling fresh peaches and tomatoes.

  19. A decision support system for delivering optimal quality peach and tomato

    NASA Technical Reports Server (NTRS)

    Thai, C. N.; Pease, J. N.; Shewfelt, R. L.

    1990-01-01

    Several studies have indicated that color and firmness are the two quality attributes most important to consumers in making purchasing decisions of fresh peaches and tomatoes. However, at present, retail produce managers do not have the proper information for handling fresh produce so it has the most appealing color and firmness when it reaches the consumer. This information should help them predict the consumer color and firmness perception and preference for produce from various storage conditions. Since 1987, for 'Redglobe' peach and 'Sunny' tomato, we have been generating information about their physical quality attributes (firmness and color) and their corresponding consumer sensory scores. This article reports on our current progress toward the goal of integrating such information into a model-based decision support system for retail level managers in handling fresh peaches and tomatoes.

  20. Combined salicyclic acid and ultrasound treatments for reducing the chilling injury on peach fruit.

    PubMed

    Yang, Zhenfeng; Cao, Shifeng; Zheng, Yonghua; Jiang, Yueming

    2012-02-08

    The effects of salicylic acid (SA; 1 mmol L(-1)) and ultrasound treatment (40 kHz, 10 min) either separately or combined on the chilling injury (CI) in cold-stored peach fruit ( Prunus persica Batsch cv. Baifeng) were investigated. The results showed that SA treatment alone alleviated CI during storage. Ultrasound alone had no influence, but when it was combined with SA, it resulted in greater inhibition of CI than SA alone. The activities of antioxidant enzymes, such as catalase, ascorbate peroxidase, monodehydroascorbate reductase, dehydroascorbate reductase, and glutathione reductase, were induced by a combination of SA with ultrasound. In addition, the combined treatment also increased the endogenous SA concentrations in peaches. These results suggested that the induced tolerance against CI by the combination of ultrasound and SA treatment in cold-stored peach fruit was related to the induction of antioxidant enzymes and the increase in the SA concentration.

  1. Oxalic acid alleviates chilling injury in peach fruit by regulating energy metabolism and fatty acid contents.

    PubMed

    Jin, Peng; Zhu, Hong; Wang, Lei; Shan, Timin; Zheng, Yonghua

    2014-10-15

    The effects of postharvest oxalic acid (OA) treatment on chilling injury, energy metabolism and membrane fatty acid content in 'Baifeng' peach fruit stored at 0°C were investigated. Internal browning was significantly reduced by OA treatment in peaches. OA treatment markedly inhibited the increase of ion leakage and the accumulation of malondialdehyde. Meanwhile, OA significantly increased the contents of adenosine triphosphate and energy charge in peach fruit. Enzyme activities of energy metabolism including H(+)-adenosine triphosphatase, Ca(2+)-adenosine triphosphatase, succinic dehydrogenase and cytochrome C oxidase were markedly enhanced by OA treatment. The ratio of unsaturated/saturated fatty acid in OA-treated fruit was significantly higher than that in control fruit. These results suggest that the alleviation in chilling injury by OA may be due to enhanced enzyme activities related to energy metabolism and higher levels of energy status and unsaturated/saturated fatty acid ratio. Copyright © 2014 Elsevier Ltd. All rights reserved.

  2. A functional genomics approach identifies candidate effectors from the aphid species Myzus persicae (green peach aphid).

    PubMed

    Bos, Jorunn I B; Prince, David; Pitino, Marco; Maffei, Massimo E; Win, Joe; Hogenhout, Saskia A

    2010-11-18

    Aphids are amongst the most devastating sap-feeding insects of plants. Like most plant parasites, aphids require intimate associations with their host plants to gain access to nutrients. Aphid feeding induces responses such as clogging of phloem sieve elements and callose formation, which are suppressed by unknown molecules, probably proteins, in aphid saliva. Therefore, it is likely that aphids, like plant pathogens, deliver proteins (effectors) inside their hosts to modulate host cell processes, suppress plant defenses, and promote infestation. We exploited publicly available aphid salivary gland expressed sequence tags (ESTs) to apply a functional genomics approach for identification of candidate effectors from Myzus persicae (green peach aphid), based on common features of plant pathogen effectors. A total of 48 effector candidates were identified, cloned, and subjected to transient overexpression in Nicotiana benthamiana to assay for elicitation of a phenotype, suppression of the Pathogen-Associated Molecular Pattern (PAMP)-mediated oxidative burst, and effects on aphid reproductive performance. We identified one candidate effector, Mp10, which specifically induced chlorosis and local cell death in N. benthamiana and conferred avirulence to recombinant Potato virus X (PVX) expressing Mp10, PVX-Mp10, in N. tabacum, indicating that this protein may trigger plant defenses. The ubiquitin-ligase associated protein SGT1 was required for the Mp10-mediated chlorosis response in N. benthamiana. Mp10 also suppressed the oxidative burst induced by flg22, but not by chitin. Aphid fecundity assays revealed that in planta overexpression of Mp10 and Mp42 reduced aphid fecundity, whereas another effector candidate, MpC002, enhanced aphid fecundity. Thus, these results suggest that, although Mp10 suppresses flg22-triggered immunity, it triggers a defense response, resulting in an overall decrease in aphid performance in the fecundity assays. Overall, we identified aphid

  3. Molecular genetics of blood-fleshed peach reveals activation of anthocyanin biosynthesis by NAC transcription factors.

    PubMed

    Zhou, Hui; Lin-Wang, Kui; Wang, Huiliang; Gu, Chao; Dare, Andrew P; Espley, Richard V; He, Huaping; Allan, Andrew C; Han, Yuepeng

    2015-04-01

    Anthocyanin pigmentation is an important consumer trait in peach (Prunus persica). In this study, the genetic basis of the blood-flesh trait was investigated using the cultivar Dahongpao, which shows high levels of cyanidin-3-glucoside in the mesocarp. Elevation of anthocyanin levels in the flesh was correlated with the expression of an R2R3 MYB transcription factor, PpMYB10.1. However, PpMYB10.1 did not co-segregate with the blood-flesh trait. The blood-flesh trait was mapped to a 200-kb interval on peach linkage group (LG) 5. Within this interval, a gene encoding a NAC domain transcription factor (TF) was found to be highly up-regulated in blood-fleshed peaches when compared with non-red-fleshed peaches. This NAC TF, designated blood (BL), acts as a heterodimer with PpNAC1 which shows high levels of expression in fruit at late developmental stages. We show that the heterodimer of BL and PpNAC1 can activate the transcription of PpMYB10.1, resulting in anthocyanin pigmentation in tobacco. Furthermore, silencing the BL gene reduces anthocyanin pigmentation in blood-fleshed peaches. The transactivation activity of the BL-PpNAC1 heterodimer is repressed by a SQUAMOSA promoter-binding protein-like TF, PpSPL1. Low levels of PpMYB10.1 expression in fruit at early developmental stages is probably attributable to lower levels of expression of PpNAC1 plus the presence of high levels of repressors such as PpSPL1. We present a mechanism whereby BL is the key gene for the blood-flesh trait in peach via its activation of PpMYB10.1 in maturing fruit. Partner TFs such as basic helix-loop-helix proteins and NAC1 are required, as is the removal of transcriptional repressors.

  4. Comparison of Peach Cultivars for Provision of Extrafloral Nectar Resources to Harmonia axyridis (Coleoptera: Coccinellidae).

    PubMed

    Mathews, Clarissa R; Brown, Mark W; Wäckers, Felix L

    2016-04-22

    Incorporating nonprey sugar resources into apple orchards is a potential means of enhancing biological control services, but little is known about the impacts of extrafloral nectars on aphidophagous coccinellids. We explored peach Prunus persica (L.) Batsch extrafloral nectar as a supplemental resource for Harmonia axyridis (Pallas), a key aphid predator in the mid-Atlantic United States. Extrafloral nectar quantity, temporal production, and carbohydrate profile were assessed for four peach cultivars in orchard and greenhouse culture. Seasonal densities of H. axyridis visiting extrafloral nectaries were estimated, and the propensity of beetles to feed upon extrafloral nectar was compared by cultivar in the laboratory. We also compared survival of newly eclosed adult pairs that were starved or fed aphids with or without extrafloral nectar. Peach extrafloral nectar contained six carbohydrates, with sucrose dominant for all cultivars, but extrafloral nectar production varied significantly by cultivar and collection date, with 'Lovell' yielding higher average seasonal volume than the other cultivars. Harmonia axyridis continuously foraged on peach trees lacking prey, and beetle abundance was positively correlated with the number of leaves actively producing extrafloral nectar. In laboratory assays, newly emerged adult beetles preferentially selected and consumed extrafloral nectar of Lovell peach shoots. Furthermore, when prey were initially unavailable to adult H. axyridis, the beetles were sustained by extrafloral nectar and experienced longer survival compared with beetles without the supplemental resource. Collectively, these results suggest that peach extrafloral nectar is a beneficial resource that could potentially sustain H. axyridis in orchards when prey are scarce. © The Authors 2016. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  5. Extrafloral nectaries alter arthropod community structure and mediate peach (Prunus persica) plant defense.

    PubMed

    Mathews, Clarissa R; Bottrell, Dale G; Brown, Mark W

    2009-04-01

    We investigated the role of extrafloral nectaries (EFNs) in mediating plant defense for newly established peach (Prunus persica) trees. We used peaches of a single cultivar ("Lovell") that varied with respect to EFN leaf phenotype (with or without EFNs) to determine if the EFNs affected the structure of the arthropod community colonizing newly planted seedlings. We also tested if the plants producing EFNs benefited from reduced herbivory or enhanced productivity. In the first year following planting, the young peach trees with EFNs were dominated by ants, and arthropod community diversity was lower than for trees without EFNs. The young trees with EFNs harbored fewer herbivores and experienced a twofold reduction in folivory compared to trees without EFNs. Productivity was also enhanced for the trees with EFNs, which attained significantly higher rates of trunk growth, greater terminal carbon composition, and a threefold increase in buds produced in subsequent years. In the second year of the field study, ants remained numerically dominant on trees with EFNs, but arthropod community diversity was higher than for trees without EFNs. An additional study revealed that folivory rates in May increased dramatically for trees with EFNs if ants were excluded from their canopies, indicating that ants have a protective function when the perennial trees produce new leaves. However, in later months, regardless of ants' presence, the trees with EFNs suffered less folivory than trees lacking EFNs. The diversity and richness of the predator trophic group increased when ants were excluded from trees with EFNs, but overall community diversity (i.e., herbivores and predators combined) was not affected by the ants' presence. Our research indicates that the EFNs play an important role in attracting predators that protect the trees from herbivores, and the EFN host-plant characteristic should be retained in future peach cultivar selections. Furthermore, peach production programs aimed

  6. Heat treatment of peach fruit: modifications in the extracellular compartment and identification of novel extracellular proteins.

    PubMed

    Bustamante, Claudia A; Budde, Claudio O; Borsani, Julia; Lombardo, Verónica A; Lauxmann, Martin A; Andreo, Carlos S; Lara, María V; Drincovich, María F

    2012-11-01

    Ripening of peach (Prunus persica L. Batsch) fruit is accompanied by dramatic cell wall changes that lead to softening. Post-harvest heat treatment is effective in delaying softening and preventing some chilling injury symptoms that this fruit exhibits after storage at low temperatures. In the present work, the levels of twelve transcripts encoding proteins involved in cell wall metabolism, as well as the differential extracellular proteome, were examined after a post-harvest heat treatment (HT; 39 °C for 3 days) of "Dixiland" peach fruit. A typical softening behaviour, in correlation with an increase in 1-aminocyclopropane-1-carboxylic acid oxidase-1 (PpACO1), was observed for peach maintained at 20 °C for 3 days (R3). Six transcripts encoding proteins involved in cell wall metabolism significantly increased in R3 with respect to peach at harvest, while six showed no modification or even decreased. In contrast, after HT, fruit maintained their firmness, exhibiting low PpACO1 level and significant lower levels of the twelve cell wall-modifying genes than in R3. Differential proteomic analysis of apoplastic proteins during softening and after HT revealed a significant decrease of DUF642 proteins after HT; as well as an increase of glyceraldehyde-3-phosphate dehydrogenase (GAPC) after softening. The presence of GAPC in the peach extracellular matrix was further confirmed by in situ immunolocalization and transient expression in tomato fruit. Though further studies are required to establish the function of DUF642 and GAPC in the apoplast, this study contributes to a deeper understanding of the events during peach softening and after HT with a focus on this key compartment. Copyright © 2012 Elsevier Masson SAS. All rights reserved.

  7. Impact of the Mediterranean fruit fly (medfly) Ceratitis capitata on different peach cultivars: the possible role of peach volatile compounds.

    PubMed

    Tabilio, Maria Rosaria; Fiorini, Dennis; Marcantoni, Enrico; Materazzi, Stefano; Delfini, Maurizio; De Salvador, Flavio Roberto; Musmeci, Sergio

    2013-09-01

    The relationship between susceptibility of different peach cultivars (cvs) to the Mediterranean fruit fly (medfly), Ceratitis capitata, and the volatile composition of ripe fruit of each cv has been investigated, since understanding the fruit-insect interaction mechanism is crucial for developing control strategies for such a pest. Volatile compounds were analyzed by SPME-GC-MS in three cvs highly susceptible to medfly attack (Fair Time, Flaminia, Sicilia Piatta), and in two less susceptible cvs (Percoca Romagnola 7 and Doctor Davis). Among the volatile compounds detected, 88 could be identified. The main differences found in the volatile composition of the cvs, concerned the relative abundance of esters. The least susceptible cvs, above all Percoca Romagnola 7, contained the higher amounts of hexenyl, hexyl, 3-methylbutyl, butyl and 2-methylpropyl esters; among these, some C6 derivatives detected, such as (Z)-3-hexenyl acetate, are known to act as priming agents, enhancing plant defence response to insects. Instead, a lower relative content of methyl esters, such as methyl hexanoate and methyl octanoate, known to act as medfly pheromone and attractant respectively, was found in the least susceptible cvs.

  8. Effects of different products of peach (Prunus persica L. Batsch) from a variety developed in southern Brazil on oxidative stress and inflammatory parameters in vitro and ex vivo.

    PubMed

    Gasparotto, Juciano; Somensi, Nauana; Bortolin, Rafael Calixto; Moresco, Karla Suzana; Girardi, Carolina Saibro; Klafke, Karina; Rabelo, Thallita Kelly; Morrone, Maurilio Da Silva; Vizzotto, Márcia; Raseira, Maria do Carmo Bassols; Moreira, José Claudio Fonseca; Gelain, Daniel Pens

    2014-09-01

    Antioxidant, anti-glycation and anti-inflammatory activities of fresh and conserved peach fruits (Prunus persica L. Batsch) were compared. Fresh peach pulps, peels, preserve peach pulps and the preserve syrup were prepared at equal concentrations. Rat liver, kidney and brain cortex tissue slices were pre-incubated with peach samples, subjected to oxidative stress with FeSO4 and hydrogen peroxide. Fresh peach pulps and peel conferred higher protection against cytotoxicity and oxidative stress than preserve peach pulps in most tissues. Release of tumor necrosis factor-α and interleukin-1β was also significantly decreased by Fresh peach pulps and peel, followed by preserve peach pulps. Total phenolic determination and HPLC analysis of carotenoids showed that the content of secondary metabolites in Fresh peach pulps and peel is significantly higher than in preserve peach pulps, while the syrup had only small or trace amounts of these compounds. Fresh peach pulps and Peel demonstrated high antioxidant and anti-inflammatory effects preventing against induced damage.

  9. Effects of different products of peach (Prunus persica L. Batsch) from a variety developed in southern Brazil on oxidative stress and inflammatory parameters in vitro and ex vivo

    PubMed Central

    Gasparotto, Juciano; Somensi, Nauana; Bortolin, Rafael Calixto; Moresco, Karla Suzana; Girardi, Carolina Saibro; Klafke, Karina; Rabelo, Thallita Kelly; Morrone, Maurilio Da Silva; Vizzotto, Márcia; Raseira, Maria do Carmo Bassols; Moreira, José Claudio Fonseca; Gelain, Daniel Pens

    2014-01-01

    Antioxidant, anti-glycation and anti-inflammatory activities of fresh and conserved peach fruits (Prunus persica L. Batsch) were compared. Fresh peach pulps, peels, preserve peach pulps and the preserve syrup were prepared at equal concentrations. Rat liver, kidney and brain cortex tissue slices were pre-incubated with peach samples, subjected to oxidative stress with FeSO4 and hydrogen peroxide. Fresh peach pulps and peel conferred higher protection against cytotoxicity and oxidative stress than preserve peach pulps in most tissues. Release of tumor necrosis factor-α and interleukin-1β was also significantly decreased by Fresh peach pulps and peel, followed by preserve peach pulps. Total phenolic determination and HPLC analysis of carotenoids showed that the content of secondary metabolites in Fresh peach pulps and peel is significantly higher than in preserve peach pulps, while the syrup had only small or trace amounts of these compounds. Fresh peach pulps and Peel demonstrated high antioxidant and anti-inflammatory effects preventing against induced damage. PMID:25320458

  10. Association of Macroposthonia xenoplax and Scutellonema brachyurum with the Peach Tree Short Life Syndrome

    PubMed Central

    Nesmith, W. C.; Zehr, E. I.; Dowler, W. M.

    1981-01-01

    High populations of both Scutellonema brachyurum and Macroposthonia xenoplax were detected in the root zones of peach trees growing at sites where peach tree short life occurred. Both nematodes responded to changes in tree health, with the highest numbers detected under the most vigorous trees; both populations declined as tree vigor declined. Few of either species were detected 6 months after trees died. The nematode populations were inversely correlated with each other. More M. xenoplax were recovered during cool, wet weather, but moisture seems more important than temperature in influencing population levels. Most S. brachyurum were recovered during hot, dry weather. PMID:19300749

  11. Characterization and expression analysis of AGAMOUS-like, SEEDSTICK-like, and SEPALLATA-like MADS-box genes in peach (Prunus persica) fruit.

    PubMed

    Tani, Eleni; Polidoros, Alexios N; Flemetakis, Emmanouil; Stedel, Catalina; Kalloniati, Chrissanthi; Demetriou, Kyproula; Katinakis, Panagiotis; Tsaftaris, Athanasios S

    2009-08-01

    MADS-box genes encode transcriptional regulators that are critical for flowering, flower organogenesis and plant development. Although there are extensive reports on genes involved in flower organogenesis in model and economically important plant species, there are few reports on MADS-box genes in woody plants. In this study, we have cloned and characterized AGAMOUS (AG), SEEDSTICK (STK) and SEPALLATA (SEP) homologs from peach tree (Prunus persica L. Batsch) and studied their expression patterns in different tissues as well as in fruit pericarp during pit hardening. AG- STK- and SEP-like homologs, representative of the C-, D-, E-like MADS-box gene lineages, respectively, play key roles in stamen, carpel, ovule and fruit development in Arabidopsis thaliana. Sequence similarities, phylogenetic analysis and structural characteristics were used to provide classification of the isolated genes in type C (PPERAG), type D (PPERSTK) and type E (PPERSEP1, PPERSEP3, PPERFB9) organ identity genes. Expression patterns were determined and in combination with phylogenetic data provided useful indications on the function of these genes. These data suggest the involvement of MADS-box genes in peach flower and fruit development and provide further evidence for the role of these genes in woody perennial trees that is compatible with their function in model plant species.

  12. Characterization and expression analysis of FRUITFULL- and SHATTERPROOF-like genes from peach (Prunus persica) and their role in split-pit formation.

    PubMed

    Tani, Eleni; Polidoros, Alexios N; Tsaftaris, Athanasios S

    2007-05-01

    The fruit canning industry processes large quantities of the clingstone varieties of peach (Prunus persica L. Batch). The occurrence of split-pit formation--the opening of the pit and sometimes splitting of the fruit--causes deterioration of canned fruit quality. The frequency of split-pit formation is influenced by genetic and environmental factors. To increase understanding of the molecular mechanisms underlying split-pit formation in peach, we cloned and characterized the PPERFUL and PPERSHP genes that are homologues to the genes FRUITFULL and SHATTERPROOF, respectively, which are involved in fruit splitting (pod shattering) in Arabidopsis thaliana. The deduced amino acid sequences of the two genes had high homology with members of the MADS-box family of transcription factors, and particularly with other members of the FUL-like family of A-type MADS-box proteins and PLENA-like family of C-type MADS-box proteins, respectively. PPERFUL and PPERSHP were expressed throughout fruit development from full anthesis until fruit harvest. Differences in the mRNA abundance of each gene were compared in a split-pit sensitive and a split-pit resistant variety. Results suggested that temporal regulation of PPERFUL and PPERSHP expression may have an effect on the split-pit process.

  13. Anti-rPru p 3 IgE levels are inversely related to the age at onset of peach-induced severe symptoms reported by peach-allergic adults.

    PubMed

    Pastorello, Elide Anna; Farioli, Laura; Stafylaraki, Chrysi; Mascheri, Ambra; Scibilia, Joseph; Pravettoni, Valerio; Primavesi, Laura; Piantanida, Marta; Nichelatti, Michele; Asero, Riccardo

    2013-01-01

    Sensitisation to peach lipid transfer protein (LTP; Pru p 3) is significantly associated with severe allergic symptoms in adults, but little is known about the age at onset of peach allergy. We investigated a possible correlation between specific IgE levels to Pru p 3 and the age at onset of peach allergy. One hundred and forty-eight patients allergic to peach were divided into 6 classes according to the age at onset. Sera were analyzed for IgE antibodies to peach, rPru p 3, rPru p 1, rPru p 4, rBet v 1, rBet v 2, total IgE titre, and tryptase; all collected data were statistically analysed. A significant inverse correlation was found between the age at onset of peach allergy and anti-rPru p 3 IgE levels at diagnosis (p < 0.0005; Spearman's ρ = -0.3833). In contrast, the age at onset was directly correlated with both anti-rPru p 1 IgE levels (p = 0.0001; Spearman's ρ = 0.3197) and anti-rBet v 1 IgE levels (p = 0.0006; Spearman's ρ = 0.2914) at diagnosis. No correlations were detected between the reported age at onset and anti-peach, anti-rPru p 4, anti-rBet v 2 IgE and total IgE values and serum tryptase levels. At diagnosis, when peach allergy starts at a younger age, it is likely associated with Pru p 3 sensitisation, and the younger the onset, the higher the IgE titres. When peach allergy starts at an older age, it is more likely the result of cross-reactivity to Bet v1.

  14. Primary and secondary pesticide drift profiles from a peach orchard.

    PubMed

    Zivan, Ohad; Bohbot-Raviv, Yardena; Dubowski, Yael

    2017-06-01

    Atmospheric drift is considered a major loss path of pesticide from target areas, but there is still a large gap of knowledge regarding this complex phenomenon. Pesticide drift may occur during application (Primary drift) and after it (Secondary drift). The present study focuses on primary and secondary drift from ground applications in peach orchard (tree height of 3 m), under Mediterranean climate. Detailed and prolonged vertical drift profiles at close proximity to orchard are presented, together with detailed measurements of key meteorological parameters. The effect of volatility on drift was also studied by simultaneously applying two pesticides that differ in their volatility. Drifting airborne pesticides were detected both during and after applications at sampling distances of 7 and 20 m away from orchard edge. Concentrations ranged between hundreds ng m(-3) to a few μg m(-3) and showed clear decrease with time and with upwind conditions. Almost no decline in concentrations with height was observed up to thrice canopy height (i.e., 10 m). These homogeneous profiles indicate strong mixing near orchard and are in line with the unstable atmospheric conditions that prevailed during measurements. While air concentrations during pesticide application were higher than after it, overall pesticide load drifted from the orchard during primary and secondary drift are comparable. To the best of our knowledge this is the first work to show such large vertical dispersion and long duration of secondary drift following ground application in orchards. The obtained information indicates that secondary drift should not be neglected in exposure and environmental impact estimations. Copyright © 2017 Elsevier Ltd. All rights reserved.

  15. Mapping of sea bottom topography

    NASA Technical Reports Server (NTRS)

    Calkoen, C. J.; Wensink, G. J.; Hesselmans, G. H. F. M.

    1992-01-01

    Under suitable conditions the bottom topography of shallow seas is visible in remote sensing radar imagery. Two experiments were performed to establish which remote sensing technique or combination yields optimal imaging of bottom topography and which hydro-meteorological conditions are favorable. A further goal is to gain experience with these techniques. Two experiments were performed over an area in the North Sea near the measuring platform Meetpost Noordwijk (MPN). The bottom topography in the test area is dominated by sand waves. The crests of the sand waves are perpendicular to the coast line and the dominating (tidal-)current direction. A 4x4 sq km wide section of the test area was studied in more detail. The first experiment was undertaken on 16 Aug. 1989. During the experiment the following remote sensing instruments were used: Landsat-Thematic Mapper, and NASA/JPL Airborne Imaging Radar (AIR). The hydro-meteorological conditions; current, wind, wave, and air and water temperature were monitored by MPN, a ship of Rijkswaterstaat (the OCTANS), and a pitch-and-roll WAVEC-buoy. The second experiment took place on 12 July 1992. During this experiment data were collected with the NASA/JPL polarimetric synthetic aperture radar (SAR), and a five-band helicopter-borne scatterometer. Again the hydro-meteorological conditions were monitored at MPN and the OCTANS. Furthermore, interferometric radar data were collected.

  16. Identification of differentially expressed genes associated with flower color in peach using genome-wide transcriptional analysis.

    PubMed

    Zhou, Y; Wu, X X; Zhang, Z; Gao, Z H

    2015-05-11

    Flower color is an important trait of the ornamental peach (Prunus persica L.). However, the mechanism responsible for the different colors that appear in the same genotype remains unclear. In this study, red samples showed higher anthocyanins content (0.122 ± 0.009 mg/g), which was significantly different from that in white samples (0.066 ± 0.010 mg/g). Similarly to carotenoids content, red extract (0.058 ± 0.004 mg/L) was significantly higher in white extract (0.015 ± 0.004 mg/L). We estimated gene expression using Illumina sequencing technology in libraries from white and red flower buds. A total of 3,599,960 and 3,464,141 tags were sequenced from the 2 libraries, respectively. Moreover, we identified 106 significantly differentially expressed genes between the 2 libraries. Among these, 78 and 28 represented transcripts with a higher or lower abundance of more than 2-fold than in the white flower library, respectively. GO annotation indicated that highly ranked genes were involved in the pigment biosynthetic process. Expression patterns of 11 genes were verified using quantitative reverse transcription-polymerase chain reaction assays. The results suggest that hydroxycinnamoyl-coenzyme A shikimate/quinate hydroxycinnamoyltransferase, 2-oxoglutarate-dependent dioxygenase, isoflavone reductase, riboflavin kinase, zeta-carotene desaturase, and ATP binding cassette transporter may be associated with the flower color formation. Our results may be useful for scientists focusing on Prunus persica floral development and biotechnology.

  17. Sugar Profile of Kernels as a Marker of Origin and Ripening Time of Peach (Prunus persicae L.).

    PubMed

    Stanojević, Marija; Trifković, Jelena; Akšić, Milica Fotirić; Rakonjac, Vera; Nikolić, Dragan; Šegan, Sandra; Milojković-Opsenica, Dušanka

    2015-12-01

    Large amounts of fruit seeds, especially peach, are discarded annually in juice or conserve producing industries which is a potential waste of valuable resource and serious disposal problem. Regarding the fact that peach seeds can be obtained as a byproduct from processing companies their exploitation should be greater and, consequently more information of cultivars' kernels and their composition is required. A total of 25 samples of kernels from various peach germplasm (including commercial cultivars, perspective hybrids and vineyard peach accessions) differing in origin and ripening time were characterized by evaluation of their sugar composition. Twenty characteristic carbohydrates and sugar alcohols were determined and quantified using high-performance anion-exchange chromatography with pulsed amperometric detection (HPAEC/PAD). Sucrose, glucose and fructose are the most important sugars in peach kernels similar to other representatives of the Rosaceae family. Also, high amounts of sugars in seeds of promising hybrids implies that through conventional breeding programs peach kernels with high sugar content can be obtained. In addition, by the means of several pattern recognition methods the variables that discriminate peach kernels arising from diverse germplasm and different stage of maturity were identified and successful models for further prediction were developed. Sugars such as ribose, trehalose, arabinose, galactitol, fructose, maltose, sorbitol, sucrose, iso-maltotriose were marked as most important for such discrimination.

  18. Exogenous Melatonin Treatment Increases Chilling Tolerance and Induces Defense Response in Harvested Peach Fruit during Cold Storage.

    PubMed

    Cao, Shifeng; Song, Chunbo; Shao, Jiarong; Bian, Kun; Chen, Wei; Yang, Zhenfeng

    2016-06-29

    The effect of exogenous melatonin on chilling injury in peach fruit after harvest was investigated. To explore the optimum concentration of melatonin for chilling tolerance induction, peach fruit were treated with 50, 100, or 200 μM melatonin for 120 min and then stored for 28 days at 4 °C. The results showed that application of melatonin at 100 μM was most effective in reducing chilling injury of peach fruit after harvest. Peaches treated with melatonin at this concentration displayed higher levels of extractable juice rate and total soluble solids than the non-treated peaches. In addition, melatonin treatment enhanced expression of PpADC, PpODC, and PpGAD and consequently increased polyamines and γ-aminobutyric acid (GABA) contents. Meanwhile, the upregulated transcripts of PpADC and PpODC and inhibited PpPDH expression resulted in the higher proline content in melatonin-treated fruit compared to the control fruit. Our results revealed that melatonin treatment may be a useful technique to alleviate chilling injury in cold-stored peach fruit. The chilling tolerance of harvested peaches induced by melatonin treatment is associated with higher levels of polyamine, GABA, and proline. These data provided here are the first protective evidence of exogenous melatonin in harvested horticultural products in response to direct chilling stress.

  19. Occupational Allergy to Peach (Prunus persica) Tree Pollen and Potential Cross-Reactivity between Rosaceae Family Pollens.

    PubMed

    Jiang, Nannan; Yin, Jia; Mak, Philip; Wen, Liping

    2015-10-01

    Orchard workers in north China are highly exposed to orchard pollens, especially peach and other Rosaceae family pollens during pollination season. The aim of this study was to investigate whether occupational allergy to peach tree pollen as a member of Rosaceae family is IgE-mediated and to evaluate the cross-reactivity among Rosaceae family pollens. Allergen skin test and conjunctival challenge test were performed; enzyme linked immune-sorbent assay (ELISA), inhibiting ELISA, western immunoblotting and inhibiting western immunoblotting were done with Rosaceae family orchard pollens, including peach, apricot, cherry, apple and pear tree pollens. Mass spectrometry was also performed to probe the main allergen component and cross-reactive protein. Sensitizations to peach pollen were found in both skin test and conjunctival challenge in the patients. Serum specific IgE to three pollens (peach, apricot and cherry) were detected through ELISA. When peach pollen used as solid phase, ELISA inhibition revealed other four kinds of pollens capable of inducing partial to strong inhibitions (45% to 87%), with the strongest inhibition belonging to apricot pollen (87%). Western blotting showed predominant IgE binding to a 20 KD protein among these pollens, which appeared to be a cross-reactive allergen component through western blotting inhibition. It was recognized as a protein homologous to glutathione s-transferase 16 from Arabidopsis thaliana. Peach and other Rosaceae family tree pollen may serve as a potential cause of IgE mediated occupational respiratory disease in orchard workers in north China.

  20. Effect of drought on sorbitol and sucrose metabolism in sinks and sources of peach

    Treesearch

    Riccardo Lo Bianco; Mark Rieger; Shi-Jean S. Sung

    2000-01-01

    In peach (Prunus persica [L.] Batsch.), sorbitol and sucrose are the two main forms of photosynthetic and translocated carbon and may have different functions depending on the organ of utilization and its developmental stage. The role and interaction of sorbitol and sucrose metabolism was studied in mature leaves (source) and shoot tips (sinks) of...

  1. Response of white peach scale to metabolic stress disinfection and disinfestation (MSDD) treatment

    USDA-ARS?s Scientific Manuscript database

    Metabolic stress disinfection and disinfestation (MSDD) is a postharvest treatment that combines short periods of low pressure (vacuum) and high CO2 with ethanol vapor to control pathogens and arthropod pests on commodities. The system was tested against white peach scale, Pseudaulacaspis pentagona ...

  2. Mapping quantitative trait loci associated with resistance to bacterial spot (Xanthomonas arboricola pv. pruni) in peach

    USDA-ARS?s Scientific Manuscript database

    Bacterial spot, caused by Xanthomonas arboricola pv. pruni (Xap), is a serious disease that can affect peach fruit quality and production worldwide. This disease causes severe defoliation and blemishing of fruit, particularly in areas with high rainfall, strong winds, high humidity, and sandy soil. ...

  3. Gum spots in black cherry caused by natural attacks of peach bark beetle

    Treesearch

    Charles O. Rexrode

    1981-01-01

    Peach bark beetles, Phloeotribus liminaris (Harris), made abortive attacks on healthy black cherry, Prunus serotina Ehrh., trees. The beetle attacks caused five types of gum spots in the wood and a gummy exudate on the bark. The most extensive and common types of gum spot were single and multiple rows of interray gum spots that...

  4. Infrared canopy temperature of early-ripening peach trees under postharvest deficit irrigation

    USDA-ARS?s Scientific Manuscript database

    Canopy temperature measurements with infrared thermometry have been extensively studied as a means of assessing plant water status for field and row crops but not for fruit trees such as peaches. Like in many regions of the world, the lack of water is beginning to impact production of tree fruit su...

  5. Environmental effects on fruit ripening and average fruit weight for three peach cultivars

    USDA-ARS?s Scientific Manuscript database

    Three peach cultivars, ‘Crimson Lady’ (early), ‘Redhaven’ (mid-season) and ‘Cresthaven’ (late), were planted at twelve locations within the USA in 2009. All trees were grafted on ‘Lovell’ rootstock and came from the same nursery. Five trees of each cultivar were planted at a spacing of 6m by 5m at e...

  6. DNA methylation/demethylation programming during peach flower bud dormancy release, development and blooming

    USDA-ARS?s Scientific Manuscript database

    Peach flower bud development undergoes a long, complex and temperature-dependent regulation process with cessation of growth in response to cool temperatures in late fall, a slow but gradual development during the chilling period in winter, and eventually blooming in early spring. It has been demon...

  7. Prunus rootstocks influence stem water potential, C/N ratio and shoot ash content in peach

    USDA-ARS?s Scientific Manuscript database

    Many peach rootstocks have been released in recent years with limited information about their physiological effects on scion vigor and productivity. In this study, two trials were established with ‘Redhaven’ on 9 (planted 2006) and 18 (planted 2009) rootstock cultivars at the Musser Fruit Research ...

  8. A Non-Targeted Approach Unravels the Volatile Network in Peach Fruit

    PubMed Central

    Sánchez, Gerardo; Besada, Cristina; Badenes, María Luisa; Monforte, Antonio José; Granell, Antonio

    2012-01-01

    Volatile compounds represent an important part of the plant metabolome and are of particular agronomic and biological interest due to their contribution to fruit aroma and flavor and therefore to fruit quality. By using a non-targeted approach based on HS-SPME-GC-MS, the volatile-compound complement of peach fruit was described. A total of 110 volatile compounds (including alcohols, ketones, aldehydes, esters, lactones, carboxylic acids, phenolics and terpenoids) were identified and quantified in peach fruit samples from different genetic backgrounds, locations, maturity stages and physiological responses. By using a combination of hierarchical cluster analysis and metabolomic correlation network analysis we found that previously known peach fruit volatiles are clustered according to their chemical nature or known biosynthetic pathways. Moreover, novel volatiles that had not yet been described in peach were identified and assigned to co-regulated groups. In addition, our analyses showed that most of the co-regulated groups showed good intergroup correlations that are therefore consistent with the existence of a higher level of regulation orchestrating volatile production under different conditions and/or developmental stages. In addition, this volatile network of interactions provides the ground information for future biochemical studies as well as a useful route map for breeding or biotechnological purposes. PMID:22761719

  9. Release and establishment of Encarsia diaspidicola (Hymenoptera: Aphelididae) against white peach scale in papaya

    USDA-ARS?s Scientific Manuscript database

    White peach scale, Pseudaulacaspis pentagona (Hemiptera:Diaspididae) is a serious economic pest of papaya, Carica papaya L. The parasitic wasp Encarsia diaspidicola (Hymenoptera: Aphelinidae) was brought from Samoa into a quarantine containment facility in Hawaii for evaluation and potential release...

  10. NC-140 peach rootstock testing in 13 U.S. states

    USDA-ARS?s Scientific Manuscript database

    Eighteen Prunus rootstocks budded with ‘Redhaven’ peach were planted at 16 locations in North America in 2009. Fourth-year performance from 14 locations show that significant differences among rootstocks and sites were found for survival, root suckers, growth, bloom date, fruit maturity date, fruit ...

  11. Characterization of Cylindrocarpon populations associated with replant disease of almond and peach

    USDA-ARS?s Scientific Manuscript database

    Growth and cumulative yield of replanted almond and peach orchards are often seriously compromised by Prunus replant disease (PRD), a poorly understood soilborne complex affecting successive plantings of Prunus. Previously, our culture-based (CB) and culture-independent (CI) examinations of fungal,...

  12. DNA-based identification of Armillaria isolates from peach orchards in Mexico state

    Treesearch

    Ruben Damian Elias Roman; Ned B. Klopfenstein; Dionicio Alvarado Rosales; Mee-Sook Kim; Anna E. Case; Sara M. Ashiglar; John W. Hanna; Amy L. Ross-Davis; Remigio A. Guzman Plazola

    2012-01-01

    A collaborative project between the Programa de Fitopatología, Colegio de Postgraduados, Texcoco, Estado de Mexico and the USDA Forest Service - RMRS, Moscow Forest Pathology Laboratory has begun this year (2011) to assess which species of Armillaria are causing widespread and severe damage to the peach orchards from México state, Mexico. We are employing a DNA-based...

  13. 7 CFR 917.442 - California Peach Container and Pack Regulation.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... holding 15 pounds or less net weight of peaches. “Tree ripe” means “tree ripened” and fruit shipped and marked as “tree ripe,” “tree ripened,” or any similar terms using the words “tree” and “ripe” must...

  14. Artificial rearing of the peach fruit fly Bactrocera zonata (Diptera:Tephritidae)

    USDA-ARS?s Scientific Manuscript database

    Integration of the sterile insect technique (SIT) into the area-wide management of the peach fruit fly Bactrocera zonata (Saunders) is a promising althernative to the localized use of chemical control tactics. Implementation of the SIT requires adequate numbers of sterile male insects that are produ...

  15. Detection of seed dormancy QTL in three F2 families of peach (Prunus persica)

    USDA-ARS?s Scientific Manuscript database

    Dormancy is a condition that delays or inhibits growth in seed, vegetative buds, and floral buds. In peach, seed germination occurs when seed accumulate sufficient stratification and growing degree hours to break dormancy and begin growing. Correlations have been reported between mean seed stratifi...

  16. Phenolic Composition and Antioxidant Properties of Different Peach [Prunus persica (L.) Batsch] Cultivars in China

    PubMed Central

    Zhao, Xiaoyong; Zhang, Wenna; Yin, Xueren; Su, Mingshen; Sun, Chongde; Li, Xian; Chen, Kunsong

    2015-01-01

    China is an important centre of diversity for Prunus persica. In the present study, 17 Chinese peach cultivars were evaluated for phenolic content and antioxidant activity. Neochlorogenic acid (NCHA), chlorogenic acid (CHA), procyanidin B1 (B1), catechin (CAT), cyanidin-3-O-glucoside (C3G), quercetin-3-O-galactoside (Q3GAL), quercetin-3-O-glucoside (Q3GLU), quercetin-3-O-rutinoside (Q3R), and kaempferol-3-O-rutinoside (K3R) were identified and quantified. CHA and CAT were the predominant components in both the peel and pulp of this fruit. In general, peel extracts showed higher antioxidant activities than the pulp counterparts, consistent with the observed higher phenolic content. The melting peach cultivar “Xinyu” showed the highest antioxidant potency composite (APC) index. The principal component analysis (PCA) of peel phenolics showed a clear distinction between the melting peach and nectarine. Overall, peach cultivars rich in hydroxycinnamates and flavan-3-ols showed relatively higher antioxidant activities and might be excellent sources of phytochemicals and natural antioxidants. PMID:25775157

  17. Growth and the composition and transport of carbohydrate in compatible and incompatible peach/plum grafts.

    PubMed

    Moing, A; Salesses, G; Saglio, P H

    1987-12-01

    The growth of scions and rootstocks of compatible (Prunus persica L. Batsch cv. Springtime/Prunus cerasifera L. Ehrh. cv. myrobolan P2032) and incompatible (Prunus persica L. Batsch cv. Springtime/Prunus cerasifera L. Ehrh. cv. myrobolan P18) peach/plum grafts were compared. The composition of soluble carbohydrates in phloem and cortical tissues of both peach/plum grafts and ungrafted plums and the translocation of these compounds across the union of grafted plants were examined. Sorbitol and sucrose were the dominant sugars in the phloem and cortical tissues of plum. A cyanogenic glycoside, prunasin, was present in peach tissues in amounts equivalent to those of sorbitol or sucrose, whereas only small amounts of prunasin were detected in plum tissues. The concentration of prunasin was significantly higher in the phloem of the P18 rootstock of the incompatible graft. Sorbitol was the only sugar significantly depleted in rootstock tissues of the incompatible graft when the first foliar symptoms of graft incompatibility became evident. Translocation studies with 1-(14)C-deoxyglucose showed that the relative distribution of radioactivity across the graft union was similar in both compatible and incompatible grafts. However, the total amount of radioactivity translocated across the incompatible graft was less than one-third of that translocated across the compatible graft. The results are consistent with the hypothesis of a progressive poisoning of the root system in the incompatible graft by a compound synthesized in peach foliage. The role of prunasin as a possible candidate is discussed.

  18. Assessing multiple quality attributes of peaches using spectral absorption and scattering properties

    USDA-ARS?s Scientific Manuscript database

    The objective of this research was to measure the spectral absorption and reduced scattering coefficients of peaches, using a hyperspectral imaging-based spatially-resolved method, for maturity/quality assessment. A newly developed optical property measuring instrument was used for acquiring hypersp...

  19. Peach maturity/quality assessment using hyperspectral imaging-based spatially-resolved technique

    USDA-ARS?s Scientific Manuscript database

    The objective of this research was to measure the absorption and reduced scattering coefficients of peaches, using a hyperspectral imaging-based spatially-resolved method, for their maturity/quality assessment. A newly developed optical property measuring instrument was used for acquiring hyperspect...

  20. Carbohydrate metabolism of vegetative and reproductive sinks in the late-maturing peach cultivar 'Encore'

    Treesearch

    Riccardo Lo Bianco; Mark Rieger; Shi-Jean S. Sung

    1999-01-01

    Activities of NAD+-dependent sorbitol dehydrogenase (SDH), sorbitol oxidase (SOX), sucrose synthase (SS), acid invertase (AI), and neutral invertase (NI) in ?Encore? peach (Prunus persica L.) fruits and developing shoot tips were assayed during the growing season to determine whether carbohydrate metabolizing enzymes could...

  1. Incidence of peach tree short life increased by foliar nickel application

    USDA-ARS?s Scientific Manuscript database

    Peach tree short life (PTSL) is reportedly caused by a predisposition of trees to bacterial canker (Pseudomonas syringae pv. syringae van Hall), cold injury, or a combination of both, that is the consequence of root feeding by the ring nematode, Mesocriconema xenoplax. Certain micronutrients such a...

  2. Abundance and consumption rate of glassy-winged sharpshooter (Hemiptera: Cicadellidae) on peaches and plums

    USDA-ARS?s Scientific Manuscript database

    Homalodisca vitripennis, also known as the glassy-winged sharpshooter, is a primary vector of phony peach and plum leaf scald diseases caused by Xylella fastidiosa Wells et al. Two of the following scions, (Prunus persica L. Batch cvs. Flordaking and June Gold and Prunus salicina L. cvs. Methley an...

  3. Novel peach flower types in a segregating population from ‘Helen Borchers’

    USDA-ARS?s Scientific Manuscript database

    Several new peach (Prunus persica) flower types were discovered in an F2 segregating population from an open-pollinated, non-showy-flowered F1 seedling of ‘Helen Borchers’, a double-flowered ornamental cultivar. The novel flower types were white and red single-flowered, non-showy blooms, as well as ...

  4. Phenolic composition and antioxidant properties of different peach [Prunus persica (L.) Batsch] cultivars in China.

    PubMed

    Zhao, Xiaoyong; Zhang, Wenna; Yin, Xueren; Su, Mingshen; Sun, Chongde; Li, Xian; Chen, Kunsong

    2015-03-12

    China is an important centre of diversity for Prunus persica. In the present study, 17 Chinese peach cultivars were evaluated for phenolic content and antioxidant activity. Neochlorogenic acid (NCHA), chlorogenic acid (CHA), procyanidin B1 (B1), catechin (CAT), cyanidin-3-O-glucoside (C3G), quercetin-3-O-galactoside (Q3GAL), quercetin-3-O-glucoside (Q3GLU), quercetin-3-O-rutinoside (Q3R), and kaempferol-3-O-rutinoside (K3R) were identified and quantified. CHA and CAT were the predominant components in both the peel and pulp of this fruit. In general, peel extracts showed higher antioxidant activities than the pulp counterparts, consistent with the observed higher phenolic content. The melting peach cultivar "Xinyu" showed the highest antioxidant potency composite (APC) index. The principal component analysis (PCA) of peel phenolics showed a clear distinction between the melting peach and nectarine. Overall, peach cultivars rich in hydroxycinnamates and flavan-3-ols showed relatively higher antioxidant activities and might be excellent sources of phytochemicals and natural antioxidants.

  5. Characterising root density of peach trees in a semi-arid Chernozem to increase plant density

    NASA Astrophysics Data System (ADS)

    Paltineanu, Cristian; Septar, Leinar; Gavat, Corina; Chitu, Emil; Oprita, Alexandru; Moale, Cristina; Calciu, Irina; Vizitiu, Olga; Lamureanu, Gheorghe

    2016-01-01

    The available information on root system in fully mature peach orchards in semi-arid regions is insufficient. This paper presents a study on the root system density in an irrigated peach orchard from Dobrogea, Romania, using the trench technique. The old orchard has clean cultivation in inter-row and in-row. The objectives of the study were to: test the hypothesis that the roots of fully mature peach trees occupy the whole soil volume; find out if root repulsive effect of adjacent plants occurred for the rootstocks and soil conditions; find relationships between root system and soil properties and analyse soil state trend. Some soil physical properties were significantly deteriorated in inter-row versus in-row, mainly due to soil compaction induced by technological traffic. Density of total roots was higher in-row than inter-row, but the differences were not significant. Root density decreased more intensely with soil depth than with distance from tree trunks. Root density correlated with some soil properties. No repulsive effect of the roots of adjacent peach trees was noted. The decrease of root density with distance from trunk can be used in optimising tree arrangement. The conclusions could also be used in countries with similar growth conditions.

  6. Enantioselective degradation of (2RS,3RS)-paclobutrazol in peach and mandarin under field conditions.

    PubMed

    Wang, Xiangyun; Qi, Peipei; Yang, Guiling; Wang, Xinquan; Zhang, Hu; Xu, Hao; Wang, Zhiwei; Wang, Qiang

    2014-08-01

    In this study we investigated the enantioselective degradation of (2RS,3RS)-paclobutrazol in peach and mandarin fruits under field conditions after foliar treatment at 500 mg active ingredient/L using a Lux Cellulose-1 chiral column on a reverse-phase liquid chromatography-tandem mass spectrometry system. Degradations of paclobutrazol in both fruits followed first-order kinetics, with half-lives of about 9 days. Initial deposits were 1.63 mg/kg on peach and 1.99 mg/kg on mandarin; terminal concentrations were lower than 0.05 mg/kg, which was acceptable in most cases. As anticipated, paclobutrazol levels in peels of mature mandarin were about 6.3 times higher than in pulp, indicating the potential risk of peel consumption. We also observed that paclobutrazol degradation in mature mandarin was relatively slow, indicating it might not be efficient enough to hold mandarin fruits on trees for lowering paclobutrazol concentrations. Significant enantioselectivity was observed: the (2R,3R)-enantiomer was preferentially degraded in mandarin (whole fruit, peels, and pulp) but enriched in peach. Because of its more rapid degradation in mandarin and the lower levels observed in pulp compared with peels, potential endocrine-related side effects due to the (2R,3R)-enantiomer pose less of a risk in mandarin than in peach.

  7. Transcriptomic and field evaluation of apple trees overexpressing a peach CBF gene

    USDA-ARS?s Scientific Manuscript database

    The role of CBF genes in cold response and acclimation has been well documented in both herbaceous and woody plants. Our initial research demonstrated that overexpression of a peach CBF gene (PpCBF1) in ‘M.26’ apple increases freezing tolerance of non-acclimated plants and unexpectedly also results...

  8. Suppression of pecan and peach pathogens on different substrates using Xenorhabdus bovienii and Photorhabdus luminescens

    USDA-ARS?s Scientific Manuscript database

    Prior research indicated the ability of concentrated metabolites from Xenorhabdus spp. and Photorhabdus spp. to suppress a variety of peach and pecan diseases in vitro, and on detached pecan leaves or terminals. In the current study, our objectives were to 1) determine if bacterial broths (in addit...

  9. 77 FR 3400 - Common Crop Insurance Regulations; Peach Crop Insurance Provisions

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-01-24

    ... review process of good farming practices as applicable, must be exhausted before any action against FCIC... the size of their farming operation. For instance, all producers are required to submit an application... the recommended cultural practices for fresh peach acreage in the county as determined by...

  10. Effect of papaya trunk angle on infestation by white peach scale, Pseudaulacaspis pentagona (Hemiptera: Diaspididae)

    USDA-ARS?s Scientific Manuscript database

    Two papaya (Carica papaya L.) seedlings growing in one planting hole often results in angular or non-vertical growth of the trees. Data on trunk angularity, or leaning, (deviation from the vertical line of reference) and white peach scale, Pseudaulacaspis pentagona Targioni-Tozzetti (Hemiptera: Dias...

  11. A Coordinated Approach to Peach SNP Discovery in RosBREED

    USDA-ARS?s Scientific Manuscript database

    In the USDA-funded multi-institutional and trans-disciplinary project, “RosBREED”, crop-specific SNP genome scan platforms are being developed for peach, apple, strawberry, and cherry at a resolution of at least one polymorphic SNP marker every 5 cM in any random cross, for use in Pedigree-Based Ana...

  12. Dynamics of concomitant populations of Pratylenchus vulnus and Meloidogyne incognita on peach

    USDA-ARS?s Scientific Manuscript database

    The interaction between Meloidogyne incognita and Pratylenchus vulnus on nematode reproduction and vegetative growth of Prunus persica ‘Lovell’ peach was studied in field microplots. Pratylenchus vulnus suppressed the population density of M. incognita second-stage juveniles, whereas the presence o...

  13. Efficacy of Prophyt and Captan when combined for control of peach scab in Georgia, 2014 (Flameprince)

    USDA-ARS?s Scientific Manuscript database

    Fungicides were evaluated for control of scab in an experimental peach block (‘Flameprince’) located at the USDA Research Station in Byron, GA. Chemical formulations were applied with an airblast sprayer (100 gal/A spray volume) on 27 March (petal fall to 1% shuck split), 3 Apr (shuck split to 10% s...

  14. Efficacy of Prophyt plus Captan when combined for control of peach scab in Georgia, 2014

    USDA-ARS?s Scientific Manuscript database

    Fungicides were evaluated for control of scab in an experimental peach block (‘Julyprince’) located at the USDA Research Station in Byron, GA. Chemical formulations were applied with an airblast sprayer (100 gal/A spray volume) on 27 March (petal fall to 1% shuck split), 2 Apr (shuck split to 10% sh...

  15. Efficacy of Prophyt when combined with Captec for control of peach scab in Alabama, 2014

    USDA-ARS?s Scientific Manuscript database

    Fungicides were evaluated for control of scab in a mid-ripening peach experimental block (‘Ruston Red’) located at the Chilton Area Research and Extension Center located in Clanton, AL. Chemical formulations were applied with an airblast sprayer (100 gal/A spray volume) at the petal fall and shuck s...

  16. Effect of 1-methylcyclopropene on chilling injury and quality of peach fruit during cold storage.

    PubMed

    Jin, Peng; Shang, Haitao; Chen, Jingjing; Zhu, Hong; Zhao, Yingying; Zheng, Yonghua

    2011-10-01

    The effects of different concentrations (0, 0.1, 0.5, 1, and 5 μL/L) of 1-methylcyclopropene (1-MCP) on chilling injury (CI), fruit quality, and antioxidant enzyme activities in cold-stored peach fruit (Prunus persica Batsch cv Baifeng) were investigated. The results showed that treatment with 0.5 μL/L 1-MCP significantly alleviated CI symptoms, including internal browing (IB) and flesh mealiness (FM), and maintained higher fruit quality. In addition, 1-MCP inhibited the activities of polyphenol oxidase (PPO) and peroxidase (POD), maintained higher activities of antioxidant enzymes and kept the balance of the polygalacturonase (PG)/pectinmethylesterase (PME) ratio. The treatment of 1-MCP markedly inhibited the increase of electrolyte leakage and the accumulation of malondialdehyde and hydrogen peroxide. Thus, 1-MCP (0.5 μL/L) treatment is effective in preventing CI and maintaining overall quality in peach fruit. The effect of 1-MCP on alleviating CI may be due to its capability to enhance antioxidant enzyme activities and to reduce oxidative damage. Practical Application:  Treatment with 0.5 μL/L 1-MCP significantly prevented chilling injury and maintained fruit quality in "Baifeng" peaches. In addition, 1-MCP could enhance antioxidant enzyme activities and alleviate oxidative damage. Thus, 1-MCP has the potential for application in the Asiatic peach industry. © 2011 Institute of Food Technologists®

  17. Long-term effects of sod competition on irrigated peach yield

    USDA-ARS?s Scientific Manuscript database

    Excessive vegetative growth in peach (Prunus persica L. Batsch) causes canopy shading that reduces fruit bud initiation in the canopy interior and increases pruning costs and time. Sod competition can reduce pruning but may also reduce yield. The objective of the present study was to determine if...

  18. Genetic linkage mapping in peach using morphological, RFLP and RAPD markers.

    PubMed

    Rajapakse, S; Belthoff, L E; He, G; Estager, A E; Scorza, R; Verde, I; Ballard, R E; Baird, W V; Callahan, A; Monet, R; Abbott, A G

    1995-03-01

    We have constructed a genetic linkage map of peach [Prunus persica (L.) Batsch] consisting of RFLP, RAPD and morphological markers, based on 71 F2 individuals derived from the self-fertilization of four F1 individuals of a cross between 'New Jersey Pillar' and KV 77119. This progeny, designated as the West Virginia (WV) family, segregates for genes controlling canopy shape, fruit flesh color, and flower petal color, size and number. The segregation of 65 markers, comprising 46 RFLP loci, 12 RAPD loci and seven morphological loci, was analyzed. Low-copy genomic and cDNA probes were used in the RFLP analysis. The current genetic map for the WV family contains 47 markers assigned to eight linkage groups covering 332 centi Morgans (cM) of the peach nuclear genome. The average distance between two adjacent markers is 8 cM. Linkage was detected between Pillar (Pi) and double flowers (Dl) RFLP markers linked to Pi and flesh color (γ) loci were also found. Eighteen markers remain unassigned. The individuals analyzed for linkage were not a random sample of all F2 trees, as an excess of pillar trees were chosen for analysis. Because of this, Pi and eight other markers that deviated significantly from the expected Mendelian ratios (e.g., 1∶2∶1 or 3∶1) were not eliminated from the linkage analysis. Genomic clones that detect RFLPs in the WV family also detect significant levels of polymorphism among the 34 peach cultivars examined. Unique fingerprint patterns were created for all the cultivars using only six clones detecting nine RFLP fragments. This suggests that RFLP markers from the WV family have a high probability of being polymorphic in crosses generated with other peach cultivars, making them ideal for anchor loci. This possibility was examined by testing RFLP markers developed with the WV family in three other unrelated peach families. In each of these three peach families respectively 43%, 54% and 36% of RFLP loci detected in the WV family were also polymorphic

  19. Modelling of Peach Tree (Prunus persica) Full Blooming Dates Using APCC MME Seasonal Forecasts

    NASA Astrophysics Data System (ADS)

    Chun, Jong; Kim, Sung; Lee, Hyojin; Han, Hyun-Hee; Son, In-Chang; Cho, Kyung Hwa

    2016-04-01

    Due to global warming, recently, bud-burst and flowering dates of fruit crops have become earlier and the abnormal climate increases the variabilities of temperature in spring, suggesting that the risk of frost damage has increased. However, the full blooming date prediction model for peach tree used by the Rural Developmental Administration (RDA) were developed using only one cultivar (Youmyeong) and observations from a station (Suwon). This model might not adequately reflect the characteristics of peach cultivars or local orchards. the objectives of this study were to develops the site-and cultivar-specific blooming date prediction models for major peach cultivation regions and cultivars and presents a framework for applications of the APEC Climate Center Multimodel Ensemble (APCC MME) seasonal datasets.Developmental rate (DVR), and Sequential dormancy models (Chill day, New chill day, and fraction-time models) were used to develop the locally tailored full blooming date prediction models for major peach cultivars. For the development of these models, bud-burst and full blooming dates of peach tree for 5 cultivars (Cheonhong, Youmyeong, Changbangjosaeng, Cheonjoongdo, and Janghowon) were collected from the 6 major peach cultivation sites: Chuncheon, Suwon, Cheongwon, Cheongdo, Naju, and Jinju. For the chill day model, those measures for the entire dataset regardless the location and cultivar were 2.31%, 0.79, and 3.36 day for MAPE, R2, RMSE, respectively. For the new chill day model, those values (2.19%, 0.82, and 3.16 day for MAPE, R2, RMSE, respectively) were slightly better than those of the chill day model. The model results showed that the new chill day model was found slightly highest performance than others. Based on the considerations of the predictability of the statistical downscaling method and the observed periods of the full blooming dates at each site, we determined that the APCC MME seasonal datasets were applied for the new chill day model for the

  20. Acne at The Bottom Of The Main Sequence

    NASA Astrophysics Data System (ADS)

    Barnes, John; Haswell, C.; Jenkins, J.; Jeffers, S.; Jones, H. R. A.; Lohr, M.; Pavlenko, Y.

    2016-08-01

    Starspots are an important manifestation of stellar activity and yet their distribution patterns on the lowest mass stars is not well known. Time series spectra of fully convective M dwarfs taken in the red-optical with UVES reveal numerous line profile distortions which are interpreted as starspots. We derive Doppler images for four M4.5V - M9V stars and find that contrast ratios corresponding to photosphere-spot temperature differences of only 200-300 K are sufficient to model the timeseries spectra. Although more starspot structure is found at high latitudes, spots are reconstructed at a range of phases and latitudes with mean spot filling factors of only a few per cent. The occurrence of low-contrast spots at predominantly high latitudes is in general likely to be responsible for the low amplitude photometric variability seen in late-M dwarfs. The recovered starspot patterns are used to assess their effect on precision radial velocity surveys aimed at detecting planets around this population of stars.

  1. New Insights into the Properties of Pubescent Surfaces: Peach Fruit as a Model1[OA

    PubMed Central

    Fernández, Victoria; Khayet, Mohamed; Montero-Prado, Pablo; Heredia-Guerrero, José Alejandro; Liakopoulos, Georgios; Karabourniotis, George; del Río, Víctor; Domínguez, Eva; Tacchini, Ignacio; Nerín, Cristina; Val, Jesús; Heredia, Antonio

    2011-01-01

    The surface of peach (Prunus persica ‘Calrico’) is covered by a dense indumentum, which may serve various protective purposes. With the aim of relating structure to function, the chemical composition, morphology, and hydrophobicity of the peach skin was assessed as a model for a pubescent plant surface. Distinct physicochemical features were observed for trichomes versus isolated cuticles. Peach cuticles were composed of 53% cutan, 27% waxes, 23% cutin, and 1% hydroxycinnamic acid derivatives (mainly ferulic and p-coumaric acids). Trichomes were covered by a thin cuticular layer containing 15% waxes and 19% cutin and were filled by polysaccharide material (63%) containing hydroxycinnamic acid derivatives and flavonoids. The surface free energy, polarity, and work of adhesion of intact and shaved peach surfaces were calculated from contact angle measurements of water, glycerol, and diiodomethane. The removal of the trichomes from the surface increased polarity from 3.8% (intact surface) to 23.6% and decreased the total surface free energy chiefly due to a decrease on its nonpolar component. The extraction of waxes and the removal of trichomes led to higher fruit dehydration rates. However, trichomes were found to have a higher water sorption capacity as compared with isolated cuticles. The results show that the peach surface is composed of two different materials that establish a polarity gradient: the trichome network, which has a higher surface free energy and a higher dispersive component, and the cuticle underneath, which has a lower surface free energy and higher surface polarity. The significance of the data concerning water-plant surface interactions is discussed within a physiological context. PMID:21685175

  2. Deficit irrigation strategies combined with controlled atmosphere preserve quality in early peaches.

    PubMed

    Falagán, Natalia; Artés, Francisco; Gómez, Perla A; Artés-Hernández, Francisco; Conejero, Wenceslao; Aguayo, Encarna

    2015-10-01

    Due to the water scarcity in the Mediterranean countries, irrigation must be optimized while keeping fruit quality. The effect of deficit irrigation strategies on changes in quality parameters of the early "Flordastar" peaches was studied. The deficit irrigation was programmed according to signal intensity of the maximum daily trunk shrinkage; deficit irrigation plants were irrigated to maintain maximum daily trunk shrinkage signal intensity values close to 1.4 or 1.3 in the case of DI1 or DI2 plants, respectively. Results were compared to a control watered at 150% crop evapotranspiration. Fruits were stored up to 14 days at 0 ℃ and 95% Relative Humidity (RH) in air or in controlled atmosphere (controlled atmosphere; 3-4 kPa O2 and 12-14 kPa CO2), followed by a retail sale period of 4 days at 15 ℃ and 90-95% Relative Humidity in air. Weight losses were lower in controlled atmosphere stored peaches from deficit irrigation. Air-stored fruits developed a more intense red color due to a faster ripening, which was not affected by the type of watering. At harvest, deficit irrigation peaches showed higher soluble solids content, which provided a better sensory evaluation. The soluble phenolic content was initially higher (55.26 ± 0.18 mg gallic acid equivalents/100 g fresh weight) and more stable throughout postharvest life in DI1 fruits than in those from the other irrigation treatments. Concerning vitamin C, control fruits at harvest showed higher ascorbic acid than dehydroascorbic acid content (5.43 versus 2.43 mg/100 g fresh weight, respectively), while water stressed peaches showed the opposite results. The combination of DI2 and controlled atmosphere storage allowed saving a significant amount of water and provided peaches with good overall quality, maintaining the bioactive compounds analyzed. © The Author(s) 2014.

  3. Age of the Peach Springs Tuff, southeastern California and western Arizona

    NASA Astrophysics Data System (ADS)

    Nielson, J. E.; Lux, D. R.; Dalrymple, G. B.; Glazner, A. F.

    1990-01-01

    Sanidine separates from pumice of the early Miocene Peach Springs Tuff are concordantly dated at 18.5±0.2 Ma by two isotopic techniques. The Peach Springs Tuff is the only known unit that can be correlated between isolated outcrops of Miocene strata from the central Mojave Desert of southeastern California to the western Colorado Plateau in Arizona, across five structural provinces, a distance of 350 km. Thus the age of the Peach Springs Tuff is important to structural and paleogeographic reconstructions of a large region. Biotite and sanidine separates from bulk samples of the Peach Springs Tuff from zones of welding and vapor-phase alteration have not produced consistent ages by the K-Ar method. Published ages of mineral separates from 17 localities ranged from 16.2 to 20.5 Ma. Discordant 40Ar/39Ar incremental release spectra were obtained for one biotite and two of the sanidine separates. Ages that correspond to the last gas increments are as old as 27 Ma. The 40Ar/39Ar incremental release determinations on sanidine separated from blocks of Peach Springs Tuff pumice yield ages of 18.3±0.3 and 18.6±0.4 Ma. Laser fusion measurements yield a mean age of 18.51±0.10. The results suggest that sanidine and biotite K-Ar ages older than about 18.5 Ma are due to inherited Ar from pre-Tertiary contaminants, which likely were incorporated into the tuff during deposition. Sanidine K-Ar ages younger than 18 Ma probably indicate incomplete extraction of radiogenic 40Ar, whereas laser fusion dates of biotite and hornblende younger than 18 Ma likely are due to postdepositional alteration. Laser fusion ages as high as 19.01 Ma on biotite grains from pumice suggest that minerals from pre-Tertiary country rocks also were incorporated in the magma chamber.

  4. Organic fertilization leads to increased peach root production and lifespan.

    PubMed

    Baldi, E; Toselli, M; Eissenstat, D M; Marangoni, B

    2010-11-01

    We evaluated the effects of mineral and organic fertilizers on peach root dynamics in the growing season from 2003 to 2006 in a nectarine (Prunus persica L.) orchard, planted in 2001 and located in the Po valley, northeastern Italy. Very few studies have conducted long-term investigations of root dynamics of fruit crops. Our main objective was to determine whether organic fertilizers affect root dynamics differently than mineral fertilizers. The experiment was a completely randomized block design with four replicates of three treatments: unfertilized, mineral fertilized and composted with municipal waste. Mineral fertilizers included P (100 kg ha(-1) year(-1)) and K (200 kg ha(-1) year(-1)) applied only at planting and N (70-130 kg ha(-1) year(-1)) split into two applications, one at 40 days after full bloom (60%) and the other in September (40%) each year. The compost fertilization represented a yearly rate of 10 metric tons (t) dry weight ha(-1), which approximates (in kg ha(-1) year(-1)) 240 N, 100 P and 200 K, split similarly to that described for the mineral fertilization of N. Both root growth and survival were evaluated at 20-day intervals during the growing season by the minirhizotron technique. Compost increased the production of new roots compared with the other treatments (P < 0.01). Roots were mainly produced at a depth of 41-80 cm and from March to May and in late summer. An analysis of covariance indicated no significant effect of soil nitrate on root production (P = 0.47). The root lifespan was longer in compost-treated trees than in mineral-fertilized or unfertilized trees (P < 0.01) and it was strongly affected by time of birth; roots born later in the summer lived longer than those born in the spring. Across years and treatments, the average root lifespan was positively correlated with soil nitrate (r = 0.60; P < 0.001). Variation in root lifespan with method of fertilization could be accounted for by variation in soil

  5. Vacuum leak detection for double bottom tanks

    SciTech Connect

    Hagen, T.; Rials, R.

    1995-12-31

    Double bottom tanks offer strong leak detection advantages. By incorporating the use of vacuum detection between the two bottoms, the tank bottoms can be verified leak free after construction and during tank use. Utilizing vacuum leak detection requires special considerations. In 1992 a tank construction company built 10 tanks for an oil company in Ponca City, Oklahoma. Each of these tanks were built with a double bottom. This paper provides insight into the planning, construction and testing of this type of double bottom design.

  6. High Host Specificity in Encarsia diaspidicola (Hymenoptera: Aphelinidae), a Biological Control Candidate Against the White Peach Scale in Hawaii

    USDA-ARS?s Scientific Manuscript database

    Pre-introductory host specificity tests were performed with Encarsia diaspidicola, a biological control candidate against the invasive white peach scale, Pseudaulacaspis pentagona. False oleander scale, P. cockerelli, coconut scale, Aspidiotus destructor, cycad scale, Aulacaspis yasumatsui, greenh...

  7. The Impact of Maturity Stage on Cell Membrane Integrity and Enzymatic Browning Reactions in High Pressure Processed Peaches (Prunus persica).

    PubMed

    Techakanon, Chukwan; Gradziel, Thomas M; Zhang, Lu; Barrett, Diane M

    2016-09-28

    Fruit maturity is an important factor associated with final product quality, and it may have an effect on the level of browning in peaches that are high pressure processed (HPP). Peaches from three different maturities, as determined by firmness (M1 = 50-55 N, M2 = 35-40 N, and M3 = 15-20 N), were subjected to pressure levels at 0.1, 200, and 400 MPa for 10 min. The damage from HPP treatment results in loss of fruit integrity and the development of browning during storage. Increasing pressure levels of HPP treatment resulted in greater damage, particularly in the more mature peaches, as determined by shifts in transverse relaxation time (T2) of the vacuolar component and by light microscopy. The discoloration of peach slices of different maturities processed at the same pressure was comparable, indicating that the effect of pressure level is greater than that of maturity in the development of browning.

  8. Activities of sucrose and sorbitol metabolizing enzymes in vegetative sinks of peach and correlation with sink growth rate

    Treesearch

    Riccardo Lo Bianco; Mark Rieger; Shi-Jean S. Sung

    1999-01-01

    Terminal portions of 'Flordaguard' peach roots (Prunus persica ((L.) Batsch) were divided into six segments and the activities of NAD+-dependent sorbitol dehydrogenase (SDH), sorbitol oxidase (SOX), sucrose synthase (SS), soluble acid invertase (AI),...

  9. Profiling sugar metabolism during fruit development in a peach progeny with different fructose-to-glucose ratios.

    PubMed

    Desnoues, Elsa; Gibon, Yves; Baldazzi, Valentina; Signoret, Véronique; Génard, Michel; Quilot-Turion, Bénédicte

    2014-11-25

    Fruit taste is largely affected by the concentration of soluble sugars and organic acids and non-negligibly by fructose concentration, which is the sweetest-tasting sugar. To date, many studies investigating the sugars in fruit have focused on a specific sugar or enzyme and often on a single variety, but only a few detailed studies addressing sugar metabolism both as a whole and dynamic system are available. In commercial peach fruit, sucrose is the main sugar, followed by fructose and glucose, which have similar levels. Interestingly, low fructose-to-glucose ratios have been observed in wild peach accessions. A cross between wild peach and commercial varieties offers an outstanding possibility to study fruit sugar metabolism. This work provides a large dataset of sugar composition and the capacities of enzymes that are involved in sugar metabolism during peach fruit development and its genetic diversity. A large fraction of the metabolites and enzymes involved in peach sugar metabolism were assayed within a peach progeny of 106 genotypes, of which one quarter displayed a low fructose-to-glucose ratio. This profiling was performed at six stages of growth using high throughput methods. Our results permit drawing a quasi-exhaustive scheme of sugar metabolism in peach. The use of a large number of genotypes revealed a remarkable robustness of enzymatic capacities across genotypes and years, despite strong variations in sugar composition, in particular the fructose-to-glucose ratio, within the progeny. A poor correlation was also found between the enzymatic capacities and the accumulation rates of metabolites. These results invalidate the hypothesis of the straightforward enzymatic control of sugar concentration in peach fruit. Alternative hypotheses concerning the regulation of fructose concentration are discussed based on experimental data. This work lays the foundation for a comprehensive study of the mechanisms involved in sugar metabolism in developing fruit.

  10. Aphid (Hemiptera: Aphididae) species composition and potential aphid vectors of plum pox virus in Pennsylvania peach orchards.

    PubMed

    Wallis, C M; Fleischer, S J; Luster, D; Gildow, F E

    2005-10-01

    Plum pox, an invasive disease recently identified in Pennsylvania stone fruit orchards, is caused by the aphid-transmitted Plum pox virus (genus Potyvirus, family Potyviridae, PPV). To identify potential vectors, we described the aphid species communities and the seasonal dynamics of the dominant aphid species within Pennsylvania peach orchards. Aphids were trapped weekly in 2002 and 2003 from mid-April through mid-November within two central Pennsylvania orchards by using yellow and green water pan traps. In total, 42 aphid species were identified from both orchards over 2 yr. Within orchards, actual species richness ranged from 24 to 30 species. The Abundance Based Coverage Estimator predicted species richness to range from 30 to 36 species, indicating that trap catches were identifying most aphid species expected to occur in the orchard. Three species, Rhopalosiphum maidis (Fitch), Aphis spiraecola Patch, and Myzus persicae (Sulzer), were consistently dominant across locations and years. Orchard-trapped populations of these three species peaked in a similar chronological sequence each year. As expected, trap color influenced the total number and distribution of the predominate species collected. However, the same dominant species occurred in both yellow and green traps. Based on the seasonal population dynamics reported here and on published vector efficacy studies, the most probable significant PPV vector was identified as A. spiraecola. If the PPV pathogen escapes current quarantine or if subsequent reintroductions of PPV occur, these data will be useful for developing plum pox management strategies.

  11. Genome-Wide Identification, Expression Patterns, and Functional Analysis of UDP Glycosyltransferase Family in Peach (Prunus persica L. Batsch)

    PubMed Central

    Wu, Boping; Gao, Liuxiao; Gao, Jie; Xu, Yaying; Liu, Hongru; Cao, Xiangmei; Zhang, Bo; Chen, Kunsong

    2017-01-01

    Peach (Prunus persica L. Batsch) is a commercial grown fruit trees, important because of its essential nutrients and flavor promoting secondary metabolites. The glycosylation processes mediated by UDP-glycosyltransferases (UGTs) play an important role in regulating secondary metabolites availability. Identification and characterization of peach UGTs is therefore a research priority. A total of 168 peach UGT genes that distributed unevenly across chromosomes were identified based on their conserved PSPG motifs. Phylogenetic analysis of these genes with plant UGTs clustered them into 16 groups (A–P). Comparison of the patterns of intron–extron and their positions within genes revealed one highly conserved intron insertion event in peach UGTs. Tissue specificity, temporal expression patterns in peach fruit during development and ripening, and in response to abiotic stress UV-B irradiation was investigated using RNA-seq strategy. The relationship between UGTs transcript levels and concentrations of glycosylated volatiles was examined to select candidates for functional analysis. Heterologous expressing these candidate genes in Escherichia coli identified UGTs that were involved in the in vitro volatile glycosylation. Our results provide an important source for the identification of functional UGT genes to potential manipulate secondary biosynthesis in peach. PMID:28382047

  12. Genome-Wide Identification, Expression Patterns, and Functional Analysis of UDP Glycosyltransferase Family in Peach (Prunus persica L. Batsch).

    PubMed

    Wu, Boping; Gao, Liuxiao; Gao, Jie; Xu, Yaying; Liu, Hongru; Cao, Xiangmei; Zhang, Bo; Chen, Kunsong

    2017-01-01

    Peach (Prunus persica L. Batsch) is a commercial grown fruit trees, important because of its essential nutrients and flavor promoting secondary metabolites. The glycosylation processes mediated by UDP-glycosyltransferases (UGTs) play an important role in regulating secondary metabolites availability. Identification and characterization of peach UGTs is therefore a research priority. A total of 168 peach UGT genes that distributed unevenly across chromosomes were identified based on their conserved PSPG motifs. Phylogenetic analysis of these genes with plant UGTs clustered them into 16 groups (A-P). Comparison of the patterns of intron-extron and their positions within genes revealed one highly conserved intron insertion event in peach UGTs. Tissue specificity, temporal expression patterns in peach fruit during development and ripening, and in response to abiotic stress UV-B irradiation was investigated using RNA-seq strategy. The relationship between UGTs transcript levels and concentrations of glycosylated volatiles was examined to select candidates for functional analysis. Heterologous expressing these candidate genes in Escherichia coli identified UGTs that were involved in the in vitro volatile glycosylation. Our results provide an important source for the identification of functional UGT genes to potential manipulate secondary biosynthesis in peach.

  13. Crucial roles of membrane stability and its related proteins in the tolerance of peach fruit to chilling injury.

    PubMed

    Zhang, Changfeng; Ding, Zhansheng; Xu, Xiangbing; Wang, Qing; Qin, Guozheng; Tian, Shiping

    2010-06-01

    Proteome patterns in peach fruit (Prunus persica L.) stored at different low temperatures were examined in order to gain a better understanding why peach fruit is less prone to chilling injury when stored at 0 degrees C than at 5 degrees C. Some differently expressed proteins in peach fruit stored at 0 and 5 degrees C were identified using electrospray ionization quadrupole time-of-flight tandem mass spectrometry. Among these proteins, four membrane stability related proteins, i.e., enolase, temperature-induced lipocalin, major allergen Pru p 1, and type II SK2 dehydrin were enhanced, but three proteins related to phenolic compounds metabolization, cinnamyl-alcohol dehydrogenase 5, cinnamyl-alcohol dehydrogenase 1, and chorismate mutase, were repressed in peach fruit at 0 degrees C as compared to that at 5 degrees C. The abundance of glucose-6-phosphate dehydrogenase, NADP-dependent isocitrate dehydrogenase, and NADP-dependent malic enzyme, which catalyze the reactions during sugar metabolism and energy pathways, was found to decrease in peach fruit stored at 0 degrees C. In addition, our data revealed that low temperature of 0 degrees C might regulate the endogenous H(2)O(2) level, resulting in activating the transcriptional level of genes encoding the proteins related to membrane stability. These results provide a comprehensive knowledge to understand the mechanisms by which peach fruit stored at 0 degrees C showed a higher chilling tolerance than that at 5 degrees C.

  14. Antifungal Activity of Isolated Bacillus amyloliquefaciens SYBC H47 for the Biocontrol of Peach Gummosis

    PubMed Central

    Zhang, Yanzhou; Wei, Zhiwen; Guan, Zhengbing; Cai, Yujie; Liao, Xiangru

    2016-01-01

    The gummosis disease is caused by Botryosphaeria dothidea (Moug. ex. Fr) Ces. et de Not., and it is one of the most important diseases of stone fruits worldwide. The use of biocontrol as an alternative approach to synthetic chemical fungicides has aroused general concern about how to control plant diseases that are caused by phytopathogens. The aim of this study is to isolate Bacillus strains from raw honeys with the capacity to inhibit B. dothidea and to explore the mechanisms by which they could be used in the biocontrol of peach gummosis. Bacillus amyloliquefaciens SYBC H47 was isolated and identified on the basis of its physiological and biochemical characteristics and its 16S rRNA and gyrB gene sequences. The cell suspension and the cell-free supernatant of its culture showed significant antifungal activity against Aspergillus niger, Mucor racemosus, Fusarium oxysporum, Penicillium citrinum, and Candida albicans by agar-diffusion assays. The primary antifungal substances were bacillomycin L, fengycin, and surfactin, which were analyzed by HPLC LC/ESI-MS/MS. Bacillomycin L showed the best inhibitory effect against conidial germination of B. dothidea, followed by fengycin and surfactin. Surfactin had limited effects on mycelial growth, contrary to those of bacillomycin L and fengycin. However, a mixture of the three lipopeptides had a synergistic effect that disrupted the structure of the conidia and mycelia. In order to reduce the production cost, the use of waste frying peanut oil and soy oil as the sole carbon source increased the lipopeptide yield levels by approximately 17% (2.42 g/L) and 110% (4.35 g/L), respectively. In a field trial, the decreases in the infected gummosis rate (IGR) and the disease severity index (DSI) through cell suspension treatments were 20% and 57.5% (in 2014), respectively, and 40% and 57.5% (in 2015), respectively, in comparison with the control. In conclusion, B. amyloliquefaciens SYBC H47 could inhibit the germination of conidia

  15. Lifetime measurements for bottom hadrons

    SciTech Connect

    Wolf, G.

    1984-09-01

    The review of lifetime measurements of bottom hadrons begins with a first measurement by JADE, followed by similar measurements by MAC and MKII groups. New MAC data are reviewed based on a total of 75,000 multihadron events taken at a c.m. energy of 29 GeV. According to Monte Carlo calculations, 18% of the lepton candidates stem from charm decay and roughly 30% were misidentified hadrons. DELCO studied electrons obtained from 42,000 multihadron events at 29 GeV. The electrons were identified by means of Cerenkov counters. JADE analayzed 22,000 multihadron events at 35 GeV. Data were analyzed using two methods - one using a sample of b-enriched events, and the other using weighted distributions. The TASSO results were obtained with two different configurations of the detector - one of which used a drift chamber and the other a vertex detector. (LEW)

  16. Location of independent root-knot nematode resistance genes in plum and peach.

    PubMed

    Claverie, M; Bosselut, N; Lecouls, A C; Voisin, R; Lafargue, B; Poizat, C; Kleinhentz, M; Laigret, F; Dirlewanger, E; Esmenjaud, D

    2004-02-01

    Prunus species express different ranges and levels of resistance to the root-knot nematodes (RKN) Meloidogyne spp. In Myrobalan plum ( Prunus cerasifera), the dominant Ma gene confers a high-level and wide-spectrum resistance to the predominant RKN, Meloidogyne arenaria, Meloidogyne incognita, Meloidogyne javanica and the isolate Meloidogyne sp. Florida which overcomes the resistance of the Amygdalus sources. In Japanese plum ( Prunus salicina), a similar wide-spectrum dominant resistance gene, termed R(jap), has been hypothesized from an intraspecific segregating cross. In peach, two crosses segregating for resistance to both M. incognita and M. arenaria were used to identify single genes that each control both RKN species in the Shalil ( R(Mia557)) and Nemared ( R(MiaNem)) sources. Localisation of these genes was made possible using the RFLP and SSR- saturated reference Prunus map TxE, combined with a BSA approach applied to some of the genes. The Ma1 allele carried by the Myrobalan plum accession P.2175 was localised on the linkage group 7 at an approximate distance of 2 cM from the SSR marker pchgms6. In the Japanese plum accession J.222, the gene R(jap) was mapped at the same position in co-segregation with the SSR markers pchgms6 and CPPCT022. The peach genes R(Mia557) and R(MiaNem), carried by two a priori unrelated resistance sources, were co-localized in a subtelomeric position on linkage group 2. This location was different from the more centromeric position previously proposed by Lu et al. (1999) for the resistance gene Mij to M. incognita and M. javanica in Nemared, near the SSR pchgms1 and the STS EAA/MCAT10. By contrast, R(Mia557) and R(MiaNem) were flanked by STS markers obtained by Yamamoto and Hayashi (2002) for the resistance gene Mia to M. incognita in the Japanese peach source Juseitou. Concordant results for the three independent sources, Shalil, Nemared and Juseitou, suggest that these peach RKN sources share at least one major gene resistance

  17. Charm and bottom semileptonic decays

    NASA Astrophysics Data System (ADS)

    O'donnell, Patrick J.; Turan, Gürsevil

    1997-07-01

    We review the present status of theoretical attempts to calculate the semileptonic charm and bottom decays and then present a calculation of these decays in the light-front frame at the kinematic point q2=0. This allows us to evaluate the form factors at the same value of q2, even though the allowed kinematic ranges for charm and bottom decays are very different. Also, at this kinematic point the decay is given in terms of only one form factor A0(0). For the ratio of the decay rates given by the E653 collaboration we show that the determination of the ratio of the Cabibbo-Kobayashi-Maskawa matrix elements is consistent with that obtained from the unitarity constraint, though a new measurement by the E687 Collaboration is about two standard deviations too high. At present, though, the unitarity method still has greater accuracy. Since comparisons of the semileptonic decays into ρ and either electrons or muons will be available soon from the E791 Fermilab experiment, we also look at the massive muon case. We show that for a range of q2 the SU(3)F symmetry breaking is small even though the contributions of the various helicity amplitudes becomes more complicated. For B decays, the decay B-->K*ll¯ at q2=0 involves an extra form factor coming from the photon contribution and so is not amenable to the same kind of analysis, leaving only the decay B-->K*νν¯ as a possibility. As the mass of the decaying particle increases we note that the SU(3) symmetry becomes badly broken at q2=0.

  18. Coal liquefaction with subsequent bottoms pyrolysis

    DOEpatents

    Walchuk, George P.

    1978-01-01

    In a coal liquefaction process wherein heavy bottoms produced in a liquefaction zone are upgraded by coking or a similar pyrolysis step, pyrolysis liquids boiling in excess of about 1000.degree. F. are further reacted with molecular hydrogen in a reaction zone external of the liquefaction zone, the resulting effluent is fractionated to produce one or more distillate fractions and a bottoms fraction, a portion of this bottoms fraction is recycled to the reaction zone, and the remaining portion of the bottoms fraction is recycled to the pyrolysis step.

  19. Effects of nematicides, lime, and herbicide on peach tree short life in georgia.

    PubMed

    Wehunt, E J; Horton, B D; Prince, V E

    1980-07-01

    Peach tree mortality was 75% five years after planting on a site associated with peach tree short life and receiving no nematicide treatment, no lime, and with cultivation for weed control. Mortality was reduced to 29% by preplanting plus postplanting applications of DBCP (1,2-dibromo-3-chloropropane) and with herbicidal weed control. Preplanting applications of nematicides alone did not effectively reduce tree mortality or increase yield. Lime applications increased yield but did not affect tree growth or survival. Survival was higher with weed control by a herbicide than with control by disk cultivation. Populations of Macroposthonia xenoplax were correlated positively with tree mortality and negatively with yield. The other nematode consistently present at the site, Tylenchorhynchus claytoni, was not associated with either tree mortality or yield.

  20. Effects of Peach Cultivar on Enzymatic Browning Following Cell Damage from High-Pressure Processing.

    PubMed

    Techakanon, Chukwan; Gradziel, Thomas M; Barrett, Diane M

    2016-10-12

    Peach cultivars contribute to unique product characteristics and may affect the degree of browning after high-pressure processing (HPP). Nine peach cultivars were subjected to HPP at 0, 100, and 400 MPa for 10 min. Proton nuclear magnetic resonance ((1)H NMR) relaxometry, light microscopy, color, polyphenol oxidase (PPO) activity, and total phenols were evaluated. The development of enzymatic browning during refrigerated storage occurred because of damage during HPP that triggered loss of cell integrity, allowing substrates to interact with enzymes. Increasing pressure levels resulted in greater damage, as determined by shifts in transverse relaxation time (T2) and by light micrographs. Discoloration was triggered by membrane decompartmentalization but limited by PPO activity, which was found to correlate to cultivar harvest time (early, mid, and late season). Outcomes from the microstructure, (1)H NMR ,and PPO activity evaluation were an effective means of determining membrane decompartmentalization and allowed for prediction of browning scenarios.

  1. Transcriptome analysis of peach (Prunus persica L. Batsch) during the late stage of fruit ripening.

    PubMed

    Pan, H F; Sheng, Y; Gao, Z H; Chen, H L; Qi, Y J; Yi, X K; Qin, G H; Zhang, J Y

    2016-12-23

    Fruit ripening is a complex developmental process, the details of which remain largely unknown in fleshy fruits. In this paper, the fruit flesh of two peach varieties, "Zhongyou9" (a nectarine; Prunus persica L. Batsch) and its mutant "Hongyu", was analyzed by RNA-seq technology during two stages of ripening at 20-day intervals. One hundred and eighty significant upregulated and two hundred and thirty-five downregulated genes were identified in the experiment. Many of these genes were related to plant hormones, chlorophyll breakdown, accumulation of aroma and flavor volatiles, and stress. To the best of our knowledge, this is the first transcriptome analysis of peach ripening, and our data will be useful for further studies of the molecular basis of fruit ripening.

  2. Conversion of tomato, peach and honeydew solid waste into methane gas

    SciTech Connect

    Hills, D.J.; Roberts, D.W.

    1982-01-01

    Results from a laboratory investigation on the title conversion and seasonal operation of a pilot-plant size digester are presented. For 4-L laboratory digesters operating at 35 degrees, the respective optimal loading rates and retention times for tomato, honeydew, and peach residues, were 5, 3, and 1 kg volatile solids (VS)/cubic meter-day and 25, 20, and 15 days. Under these operating conditions 33, 83, and 86% of VS were destroyed for tomato, honeydew and peach residues, respectively, and the corresponding gas productions at 0 degrees and 1 atm. were 0.43, 2.45, and 1.15 vol./digester vol-day. Operation of the 22-cubic meter pilot plant generally confirmed the laboratory data for tomato solid waste.

  3. Anaphylaxis to hidden potato allergens in a peach and egg allergic boy.

    PubMed

    Martín-Muñoz, M F; Diaz-Perales, A; Cannabal, J; Quirce, S

    2017-01-01

    More than 170 foods have been identified as being potentially allergenic. However, a minority of these foods cause the majority of reactions. Sweets are frequently implicated in allergic reactions in children with cow's milk, egg, nuts or fruits allergy, and they are the most relevant foods investigated as responsible allergens. We report an anaphylactic reaction to candies in an egg and peach allergic boy. We performed a study to identify responsible allergens for the reaction. We investigated hidden egg and peach allergens in the candies, but they were not found. Finally, the causative allergen resulted to be a vegetable protein from potato peel. We diagnosed a new allergy in our patient and Sol t 4 was identified as the responsible allergen of the anaphylactic reaction. We conclude that responsible allergens should always be studied and identified in whatever allergic reaction in order to prevent new reactions.

  4. Fruit cuticle composition of a melting and a nonmelting peach cultivar.

    PubMed

    Belge, Burcu; Llovera, Montserrat; Comabella, Eva; Graell, Jordi; Lara, Isabel

    2014-04-16

    Although postharvest quality of fruit is greatly affected by cuticle composition, structure, and properties, very few published studies have analyzed fruit cuticle composition from a postharvest perspective. In this work, the chemical composition of waxes and cutin, major cuticular components, was analyzed in fruit cuticle samples isolated from a melting ('October Sun') and a nonmelting ('Jesca') peach (Prunus persica L. Batsch.) cultivar at harvest and after a simulated shelf-life period of 5 days at 20 °C. Cutin composition was dominated by 18-hydroxyoleic acid, whereas the triterpenoid ursolic and oleanoic acids and the alkanes n-tricosane and n-pentacosane were quantitatively prominent among the wax compounds identified. Some quantitative differences were found between both cultivars for particular compound families and in their postharvest modifications. To the best of the authors' knowledge, this is the first study characterizing the composition of the cuticle of peach fruit and describing the changes therein after harvest.

  5. Two ω-3 FADs Are Associated with Peach Fruit Volatile Formation.

    PubMed

    Wang, Jiao-Jiao; Liu, Hong-Ru; Gao, Jie; Huang, Yu-Ji; Zhang, Bo; Chen, Kun-Song

    2016-03-29

    Aroma-related volatiles, together with sugars and acids, play an important role in determining fruit flavor quality. Characteristic volatiles of peach fruit are mainly derived from fatty acids such as linoleic acid (18:2) and linolenic acid (18:3). In the present study, six genes encoding fatty acid desaturases (FAD) were cloned, including two ω-6 FAD genes (PpFAD2, PpFAD6) and four ω-3 FAD genes (PpFAD3-1, PpFAD3-2, PpFAD7 and PpFAD8). Heterologous expression of peach FADs in tobacco plants showed that PpFAD3-1, and PpFAD3-2 significantly reduced contents of 18:2, and accumulated significant higher levels of 18:3. In the case of volatiles, transgenic plants produced lower concentrations of hexanal and higher levels of (E)-2-hexenal. Consequently, the ratio of the (E)-2-hexenal and hexanal was about 5- and 3-fold higher than that of wild type (WT) in PpFAD3-1 and PpFAD3-2 transformants, respectively. No significant changes in volatile profiles were observed in transgenic plants overexpressing the four other peach FAD genes. Real-time quantitative polymerase chain reaction (qPCR) analysis showed that ripe fruit had high PpFAD3-1 and low PpFAD3-2 transcript levels. In contrast, high PpFAD3-2 and low PpFAD3-1 transcript levels were observed in young fruit. These results indicate a temporal regulation of these two ω-3 FADs during development and ripening, influencing peach fruit volatile formation.

  6. Two ω-3 FADs Are Associated with Peach Fruit Volatile Formation

    PubMed Central

    Wang, Jiao-Jiao; Liu, Hong-Ru; Gao, Jie; Huang, Yu-Ji; Zhang, Bo; Chen, Kun-Song

    2016-01-01

    Aroma-related volatiles, together with sugars and acids, play an important role in determining fruit flavor quality. Characteristic volatiles of peach fruit are mainly derived from fatty acids such as linoleic acid (18:2) and linolenic acid (18:3). In the present study, six genes encoding fatty acid desaturases (FAD) were cloned, including two ω-6 FAD genes (PpFAD2, PpFAD6) and four ω-3 FAD genes (PpFAD3-1, PpFAD3-2, PpFAD7 and PpFAD8). Heterologous expression of peach FADs in tobacco plants showed that PpFAD3-1, and PpFAD3-2 significantly reduced contents of 18:2, and accumulated significant higher levels of 18:3. In the case of volatiles, transgenic plants produced lower concentrations of hexanal and higher levels of (E)-2-hexenal. Consequently, the ratio of the (E)-2-hexenal and hexanal was about 5- and 3-fold higher than that of wild type (WT) in PpFAD3-1 and PpFAD3-2 transformants, respectively. No significant changes in volatile profiles were observed in transgenic plants overexpressing the four other peach FAD genes. Real-time quantitative polymerase chain reaction (qPCR) analysis showed that ripe fruit had high PpFAD3-1 and low PpFAD3-2 transcript levels. In contrast, high PpFAD3-2 and low PpFAD3-1 transcript levels were observed in young fruit. These results indicate a temporal regulation of these two ω-3 FADs during development and ripening, influencing peach fruit volatile formation. PMID:27043529

  7. Variation in resistance mechanisms to the green peach aphid among different Prunus persica commercial cultivars.

    PubMed

    Verdugo, J A; Méndez, T; Ortiz-Martínez, S A; Cumsille, R; Ramírez, C C

    2012-10-01

    ABSTRACT Peaches and nectarines are frequently attacked by the green peach aphid Myzus persicae (Sulzer), with significant negative impacts on fruit production. The genetic variability of resistance to this aphid among commercial cultivars of Prunus persica (L.) Batsch and Prunus persica variety nectarina was evaluated in this study. In total, 16 cultivars of P. persica were selected to evaluate the occurrence and population growth rate of M. persicae in commercial orchards, as well as in no-choice and probing behavior laboratory assays. The results showed variability between cultivars in resistance and susceptibility to M. persicae, with three cultivars exhibiting different signatures of resistance. The peach cultivar 'Elegant Lady' exhibited a low occurrence of aphids in the orchard, a low rate of growth, moderate leaf-rejection in a no-choice test and a higher number and longer period of salivation into sieve elements, suggesting resistance at the phloematic level. The nectarine cultivar 'August Red' also exhibited low aphid occurrence in the orchard, a low rate of growth, and resistance at the prephloem and phloem levels. Finally, the nectarine 'July Red-NS92' exhibited a low occurrence of aphids in the orchard, a higher number of rejections in no-choice assays and no ingestion of phloem during the probing behavior experiments, suggesting prephloematic resistance. The rest of the cultivars studied exhibited clear susceptibility. Hence, different resistance mechanisms are apparent among the studied cultivars. The information gathered in this study regarding the resistance to M. persicae may assist breeding programs aimed at increasing aphid resistance to peaches and nectarines.

  8. Supercritical fluid extraction of peach (Prunus persica) almond oil: process yield and extract composition.

    PubMed

    Mezzomo, Natália; Mileo, Bruna R; Friedrich, Maria T; Martínez, Julian; Ferreira, Sandra R S

    2010-07-01

    Peach kernels are industrial residues from the peach processing, contain oil with important therapeutic properties and attractive nutritional aspects because of the high concentration of oleic and linoleic acids. The extraction method used to obtain natural compounds from raw matter is critical for product quality definition. Thus, the aim of this work was to compare peach almond extraction yields obtained by different procedures: soxhlet extractions (Sox) with different solvents; hydrodistillation (HD); ethanolic maceration (Mac) followed by fractionation with various solvents, and supercritical fluid extraction (SFE) at 30, 40 and 50 degrees C and at 100, 200 and 300bar, performed with pure CO(2) and with a co-solvent. The extracts were evaluated with respect to fatty acid composition (FAC), fractionated chemical profile (FCP) and total phenolic content (TPC). The Sox total yields were generally higher than those obtained by SFE. The crossover pressure for SFE was between 260 and 280bar. The FAC results show oleic and linoleic acids as main components, especially for Sox and SFE extracts. The FCP for samples obtained by Sox and Mac indicated the presence of benzaldehyde and benzyl alcohol, components responsible for almond flavor and with important industrial uses, whereas the SFE extracts present a high content of a possible flavonoid. The higher TPC values were obtained by Sox and Mac with ethanol. In general, the maximum pressure in SFE produced the highest yield, TPC and oleic acid content. The use of ethanol at 5% as co-solvent in SFE did not result in a significant effect on any evaluated parameter. The production of peach almond oil through all techniques is substantially adequate and SFE presented advantages, with respect to the quality of the extracts due to the high oleic acid content, as presented by some Sox samples. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  9. Biochemical and proteomic analysis of 'Dixiland' peach fruit (Prunus persica) upon heat treatment.

    PubMed

    Lara, María V; Borsani, Julia; Budde, Claudio O; Lauxmann, Martin A; Lombardo, Verónica A; Murray, Ricardo; Andreo, Carlos S; Drincovich, María F

    2009-01-01

    Shipping of peaches to distant markets and storage require low temperature; however, cold storage affects fruit quality causing physiological disorders collectively termed 'chilling injury' (CI). In order to ameliorate CI, different strategies have been applied before cold storage; among them heat treatment (HT) has been widely used. In this work, the effect of HT on peach fruit quality as well as on carbon metabolism was evaluated. When fruit were exposed to 39 degrees C for 3 d, ripening was delayed, with softening inhibition and slowing down of ethylene production. Several differences were observed between fruit ripening at ambient temperature versus fruit that had been heat treated. However, the major effects of HT on carbon metabolism and organoleptic characteristics were reversible, since normal fruit ripening was restored after transferring heated peaches to ambient temperature. Positive quality features such as an increment in the fructose content, largely responsible for the sweetness, and reddish coloration were observed. Nevertheless, high amounts of acetaldehyde and low organic acid content were also detected. The differential proteome of heated fruit was characterized, revealing that heat-induced CI tolerance may be acquired by the activation of different molecular mechanisms. Induction of related stress proteins in the heat-exposed fruits such as heat shock proteins, cysteine proteases, and dehydrin, and repression of a polyphenol oxidase provide molecular evidence of candidate proteins that may prevent some of the CI symptoms. This study contributes to a deeper understanding of the cellular events in peach under HT in view of a possible technological use aimed to improve organoleptic and shelf-life features.

  10. The RNA of both polarities of the peach latent mosaic viroid self-cleaves in vitro solely by single hammerhead structures.

    PubMed Central

    Beaudry, D; Busière, F; Lareau, F; Lessard, C; Perreault, J P

    1995-01-01

    Hammerhead self-cleavage of dimeric, monomeric, truncated and mutated transcripts derived from both polarities of the peach latent mosaic viroid (PLMVd) were characterized. In contrast to some results previously published for a very close sequence variant (see ref. 1), these RNAs exhibit a virtually identical self-cleavage during transcription and after purification. By self-cleavage of dimeric transcripts with normal and mutated hammerhead domains and by complementation experiments, we show that the cleavage reactions involve only single hammerhead structures. This observation contrasts with the case of avocado sunblotch viroid (ASBVd), the other self-cleaving viroid, whose mechanism involves mostly double hammerhead structures, whereas single hammerhead cleavage is associated with viroid-like plant satellite RNAs. The difference in stability between the native secondary structures adopted by viroids and the autocatalytic structures, including the hammerhead motif, governs the efficiency of the self-cleavage reaction. The transition between these conformers is the limiting step in catalysis and is related exclusively to the left arm region of PLMVd secondary structure, which includes the hammerhead sequences. Most of the mutations between the variant we used and the sequence variant previously published are located in this left arm region, which may explain to a great extent the differences in their cleavage efficiency. No interactions with long-range sequences contributing to the autocatalytic tertiary structure were revealed in these experiments. Images PMID:7708488

  11. Fruit quality of Redhaven and Royal Glory peach cultivars on seven different rootstocks.

    PubMed

    Orazem, Primoz; Stampar, Franci; Hudina, Metka

    2011-09-14

    Two peach cultivars, Redhaven and Royal Glory, grafted on seven different rootstocks (Adesoto, Barrier 1, GF 677, Ishtara, Monegro, Penta, and peach seedling) were analyzed for tree vigor and yield. Fruit of similar ripeness (fruit firmness) was analyzed in terms of pomological (fruit weight, soluble solids content) and biochemical parameters (individual sugars, organic acids, phenolic acids in the flesh and peel, as well as flavonols and anthocyanins in the peel). A uniform effect of rootstock on tree size was evident in the cases of both cultivars. The Ishtara rootstock induced weak tree growth; Adesoto, Penta and peach seedling semivigorous growth; and Barrier 1, GF 677, and Monegro vigorous tree growth. We recorded higher yields in the Redhaven cultivar, while no significant differences in yield in the fourth growing season were found among the rootstocks for each cultivar. Rootstock had no effect on soluble solids in the Redhaven cultivar, while in the Royal Glory it did. Penta yielded the highest soluble solids content levels, while Adesoto and Monegro were associated with low levels. In the fruit from both cultivars, the rootstock had a significant influence on individual sugars, organic acids, and phenolic acids in the pulp. We also found that phenolic acids in the pulp and skin were more affected by the rootstock than other secondary metabolites analyzed, regardless of the cultivar.

  12. Role of peach proteins in juice precipitation induced by high pressure CO2.

    PubMed

    Zhao, Feng; Zhou, Linyan; Wang, Yongtao; Liao, Xiaojun

    2016-10-15

    To better understand the role of peach proteins in juice precipitation induced by high pressure CO2 (HPCD), proteins extracted from peach juice were subjected to HPCD and heat, and changes in particle size distribution (PSD) and structure were investigated. PSD analysis showed aggregations of proteins were both induced by HPCD and heat, but HPCD induced a stronger aggregation. The endotherm of HPCD- and heat-treated proteins moved to lower temperature, indicating that higher-order structures were altered after treatments. Furthermore, proteins related to HPCD- and heat-induced precipitation were analyzed by proteomics and bioinformatics. It was found that proteins with low content of α-helix and hydrogen bonds were more inclined to precipitate under HPCD, and HPCD precipitated proteins with more compact structures than heat, which might cause the stronger aggregation of proteins by HPCD. In conclusion, HPCD could induce the aggregation of peach proteins by destroying higher-order structures, which contributes to juice precipitation. Copyright © 2016 Elsevier Ltd. All rights reserved.

  13. Identification and Expression Analysis of Polygalacturonase Family Members during Peach Fruit Softening.

    PubMed

    Qian, Ming; Zhang, Yike; Yan, Xiangyan; Han, Mingyu; Li, Jinjin; Li, Fang; Li, Furui; Zhang, Dong; Zhao, Caiping

    2016-11-18

    Polygalacturonase (PG) is an important hydrolytic enzyme involved in pectin degradation during fruit softening. However, the roles of PG family members in fruit softening remain unclear. We identified 45 PpPG genes in the peach genome which are clustered into six subclasses. PpPGs consist of four to nine exons and three to eight introns, and the exon/intron structure is basically conserved in all but subclass E. Only 16 PpPG genes were expressed in ripening fruit, and their expression profiles were analyzed during storage in two peach cultivars with different softening characteristics. Eight PGs (PpPG1, -10, -12, -13, -15, -23, -21, and -22) in fast-softening "Qian Jian Bai" (QJB) fruit and three PGs (PpPG15, -21, and -22) in slow-softening "Qin Wang" (QW) fruit exhibited softening-associated patterns; which also were affected by ethylene treatment. Our results suggest that the different softening characters in QW and QJB fruit is related to the amount of PG members. While keeping relatively lower levels during QW fruit softening, the expression of six PGs (PpPG1, -10, -12, -11, -14, and -35) rapidly induced by ethylene. PpPG24, -25 and -38 may not be involved in softening of peach fruit.

  14. Growth Response of Peach and Plum Rootstocks Infected with Pratylenchus vulnus in Microplots

    PubMed Central

    Hernández-Dorrego, A.; Pinochet, J.; Calvet, C.

    1999-01-01

    The effects of Pratylenchus vulnus on growth and nutrition of Cadaman peach and Ishtara and Julior plum rootstocks were evaluated in a microplot experiment lasting two growing seasons. Cadaman peach was the only rootstock that showed suppressed growth for all growth parameters at the end of the first year. At the end of the second growing season, dry and fresh shoot weights as well as shoot length and root weights of Cadaman peach were reduced in nematode-inoculated microplots in comparison to uninoculated treatments. Stem diameter was not affected. Dry and fresh shoot weights were the only growth parameters affected by the nematode in Ishtara plum at the end of the second growing season, whereas Julior was not affected by P. vulnus infection. No nutrient deficiencies were detected by foliar analysis in any of the rootstocks and treatments. All the tested rootstocks were good hosts for P. vulnus, whose mean root population ranged from 1,670 (Cadaman) to 2,895 (Julior) nematodes/g of root. PMID:19270932

  15. Evaluation of fruit quality, bioactive compounds and total antioxidant activity of flat peach cultivars.

    PubMed

    Di Vaio, Claudio; Marallo, Nadia; Graziani, Giulia; Ritieni, Alberto; Di Matteo, Antonio

    2015-08-15

    Fruit quality traits (fresh weight, dry weight, soluble solids content, titratable acidity and firmness) as well as the content of bioactive compounds (phenolic compounds) and total antioxidant activity were evaluated in four commercial cultivars of peach (Greta, Ufo 4, Rome Star and Ufo 6) and four of nectarine (Neve, Planet 1, Maria Carla and Mesembrina) differing in fruit shape (standard or flat) and flesh colour (white or yellow), important cultivars of the Italian and foreign market. The higher fruit organoleptic quality and nutritional profile of flat peach and nectarine cultivars make them candidates for exploiting new market opportunities and the chance to improve profits of farmers. The results showed that assayed quality parameters differed greatly among cultivars. In particular, flesh color and fruit shape accounted for most of the variation in traits underlying organoleptic and nutritional quality. Overall data suggested that the flat white-fleshed nectarine Planet 1, the yellow-fleshed nectarine Mesembrina and the yellow-fleshed peach Ufo 6, because of their profiles in terms of soluble solids content, titratable acidity and bioactive compounds, have the greatest potential to meet current consumer requirements. © 2014 Society of Chemical Industry.

  16. Differences in Antennal Sensillae of Male and Female Peach Fruit Flies in Relation to Hosts

    PubMed Central

    Awad, Azza A.; Mohamed, Hend O.; Ali, Nashat A.

    2015-01-01

    Antennal sensillae of male and female peach fruit flies, Bactrocera zonata (Saunders) (Diptera: Tephritidae), obtained from three different host fruit species (guava, Psidium guajava L. (Myrtales: Myrtaceae); peach, Prunus persica (L.) Stokes (Rosales: Rosaceae); and orange, Citrus sinensis (L.) Osbeck (Sapindales: Rutaceae)), were studied with scanning electron microscopy. This study was carried out to describe the different types of sensillae present on the three antennal segments (scape, pedicel, and flagellum or funiculus) of both sexes of B. zonata on different host fruit. The antennal segments of females tended to be larger than those of males feeding on peach and guava fruit. On orange, both sexes were similar (no significant differences were found). The first two antennal segments, scape and pedicel, are reinforced by some bristles and have different types of sensillae, including trichoid I, II, S; basiconic II; and sensilla chaetica in different numbers on different host fruit species. Numerous microtrichia, as well as trichoid (I, II), basiconic (I), clavate, and coeloconic (I, II) sensillae were observed on the funiculus with a great variation in number and length. As a result of feeding on different hosts, differences were found between sexes and some plasticity in size, number, distribution, and position of some sensillae, including trichoid, basiconic, chaetica, and clavate on the antennae of the female B. zonata. These sensillae were significantly larger in females. Also, some morphological and morphemetric differences have been found according to their feeding on different host fruit. PMID:25688086

  17. Stability of polyphenols and carotenoids in strawberry and peach yoghurt throughout in vitro gastrointestinal digestion.

    PubMed

    Oliveira, Ana; Pintado, Manuela

    2015-05-01

    The aim of this research was to evaluate the influence of in vitro gastrointestinal digestion on the stability and bio-accessibility of phenolic compounds and carotenoids, as well as on the antioxidant activity in strawberry and peach enriched yoghurt. The radical scavenging capacity of strawberry and peach yoghurt was 480 and 550% higher, respectively, at the level of the intestine than in fruit yoghurt not subjected to digestion. In strawberry the amount of bio-accessible anthocyanins increased during gastric digestion and the transition to the intestinal compartment produced a decrease in all the analyzed classes of polyphenols, being more pronounced in pelargonidin-3-glucoside (65%) and pelargonidin-3-rutinoside (58%). In peach the (+)-catechin content strongly decreased (80%), and neochlorogenic, chlorogenic acid, rutin and the carotenoid zeaxanthin decreased at lower levels, between 32-45%, while β-carotene was rather stable under gastric conditions (increased by 12%) during intestinal digestion. Despite the decrease in the concentration of these bioactive compounds after being subjected to in vitro gastrointestinal digestion, results suggest that fruit yoghurt is an important source of bio-accessible polyphenols and carotenoids and that despite some losses induced by digestion conditions, it still releases relevant amounts at the level of the intestine to be absorbed and to promote health benefits.

  18. Identification and Expression Analysis of Polygalacturonase Family Members during Peach Fruit Softening

    PubMed Central

    Qian, Ming; Zhang, Yike; Yan, Xiangyan; Han, Mingyu; Li, Jinjin; Li, Fang; Li, Furui; Zhang, Dong; Zhao, Caiping

    2016-01-01

    Polygalacturonase (PG) is an important hydrolytic enzyme involved in pectin degradation during fruit softening. However, the roles of PG family members in fruit softening remain unclear. We identified 45 PpPG genes in the peach genome which are clustered into six subclasses. PpPGs consist of four to nine exons and three to eight introns, and the exon/intron structure is basically conserved in all but subclass E. Only 16 PpPG genes were expressed in ripening fruit, and their expression profiles were analyzed during storage in two peach cultivars with different softening characteristics. Eight PGs (PpPG1, -10, -12, -13, -15, -23, -21, and -22) in fast-softening “Qian Jian Bai” (QJB) fruit and three PGs (PpPG15, -21, and -22) in slow-softening “Qin Wang” (QW) fruit exhibited softening-associated patterns; which also were affected by ethylene treatment. Our results suggest that the different softening characters in QW and QJB fruit is related to the amount of PG members. While keeping relatively lower levels during QW fruit softening, the expression of six PGs (PpPG1, -10, -12, -11, -14, and -35) rapidly induced by ethylene. PpPG24, -25 and -38 may not be involved in softening of peach fruit. PMID:27869753

  19. [Natural inducing factors of peach bud dormancy and roles of Ca2+ in the dormancy induction].

    PubMed

    Wang, Hai-bo; Wang, Xiao-di; Cheng, Cun-gang; Wang, Bao-liang; Li, Min; Gao, Dong-sheng; Liu, Feng-zhi

    2008-11-01

    Taking two-year-old peach tree of cv 'Chunjie' as test material, the natural inducing factors of peach bud dormancy and the roles of Ca2+ in the dormancy induction were studied. The results revealed that peach plant was very sensitive to short sunlight and/or natural low temperature. These two factors could induce growth cessation, dormancy, and freezing-resistance development, but their action mechanisms differed with each other. Short sunlight induced the dormancy first and the freezing-resistance then, whereas natural low temperature was in adverse. In case of the cofunction of short sunlight and low temperature, i.e., under the natural condition, short sunlight was the main factor inducing growth cessation, dormancy, and freezing-resistance development, while natural low temperature was the secondary one. The inducement effect of short sunlight was closely related to the actions of Ca2+, because Ca2+ played a messenger role in the signal transduction of short sunlight. In the experiment of supplemental light, it was found that with the decrease of temperature, the Ca2+ had an increasing influx from the vacuole, intercellular space, and cell wall to the cytosol and nuclei. At the same time, plant growth slowed down and finally ceased, dormancy started then, and freezing-resistance developed, which indicated that as a messenger in the signal transduction of natural low temperature, Ca2+ played an important role in the inducement of growth cessation, dormancy, and freezing-resistance development by natural low temperature.

  20. Where does Grapholita molesta (Busck) (Lepidoptera: Tortricidae) overwinter in adjacent peach, pear and apple orchards?

    PubMed

    Yang, X-F; Fan, F; Wang, C; Wei, G-S

    2016-02-01

    The Oriental fruit moth, Grapholita molesta (Lepidoptera: Tortricidae), is a major pest of tree fruits worldwide, and the diapausing larvae overwinter in cryptic habitats. Investigations of overwintering G. molesta were conducted in adjacent peach, pear and apple orchards in Northern China over three consecutive winters to determine the overwintering site and habitat preferences of the moth. Counts of overwintering larvae in the different orchards demonstrated that the late-maturing peach orchard ('Shenzhou honey peach') was the most preferred overwintering habitat with more than 90% of the collected larvae. Larvae were more abundant in host trees, and they very rarely overwintered in the soil. The overwintering site preferences on the host trees were significantly different; over 50% larvae were located in the tree trunks, and followed by main branches. Most of the G. molesta overwintered on the sunny side of the host trees at or below 60 cm from the ground; a few were cocooned on the shaded sides of the trees or greater than 60 cm from the ground. G. molesta began overwintering between August and October, mid- to late September was the peak period for entering winter diapause during 2011-2013 (77.78, 67.59 and 71.15%, respectively). Our findings improve understanding of the orchard habitat and overwintering site preferences of G. molesta and would be useful in the development of efficient forecasting and pest-management strategies for orchards during the winter and early spring.

  1. Fermentation characteristics and lactic Acid bacteria succession of total mixed ration silages formulated with peach pomace.

    PubMed

    Hu, Xiaodong; Hao, Wei; Wang, Huili; Ning, Tingting; Zheng, Mingli; Xu, Chuncheng

    2015-04-01

    The objective of this study was to assess the use of peach pomace in total mixed ration (TMR) silages and clarify the differences in aerobic stability between TMR and TMR silages caused by lactic acid bacteria (LAB). The TMR were prepared using peach pomace, alfalfa hay or Leymus chinensis hay, maize meal, soybean meal, cotton meal, limestone, a vitamin-mineral supplement, and salt in a ratio of 6.0:34.0:44.4:7.0:5.0:2.5:1.0:0.1 on a dry matter (DM) basis. Fermentation quality, microbial composition, and the predominant LAB were examined during ensiling and aerobic deterioration. The results indicated that the TMR silages with peach pomace were well fermented, with low pH and high lactic acid concentrations. The aerobic stability of TMR silages were significantly higher than that of TMR. Compared with TMR silages with alfalfa hay, TMR silage with Leymus chinensis hay was much more prone to deterioration. Although the dominant LAB were not identical in TMR, the same dominant species, Lactobacillus buchneri and Pediococcus acidilactici, were found in both types of TMR silages after 56 d of ensiling, and they may play an important role in the aerobic stability of TMR silages.

  2. Comparative assessment of physicochemical properties of unripe peach (Prunus persica) and Japanese apricot (Prunus mume)

    PubMed Central

    Kim, Hye-Ryun; Kim, Il-Doo; Dhungana, Sanjeev Kumar; Kim, Mi-Ok; Shin, Dong-Hyun

    2014-01-01

    Objective To investigate the physicochemical properties of unripe peach-Prunus persica cv. Mibaekdo (Mibaekdo) and Prunus persica cv. Nagasawa Hakuho (Nagasawa Hakuho) as an alternative to food supplement while Japanese apricot (Prunus mume cv. Backaha) (Backaha) was used as a control sample. Methods The unripe fruits were analyzed for soluble solid ( ˚Brix), titratable acidity, pH, total polyphenol content, 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity, amygdalin content, free amino acid content, organic acid content, free sugar content, and α-amylase activities. Results Total polyphenol content of unripe peach ranged between 137.27-151.64 µg/g whereas that of apricot was 160.73 µg/g. DPPH radical scavenging activities of Backaha was the highest (89.16%) followed by Mibaekdo (85.05%) and Nagasawa Hakuho (41.50%). The highest amount of oxalic acid (612.8 mg/100 g) was observed in Mibaekdo while that of Nagasawa Hakuho and Backaha were (184.6±18.1) and (334.8±16.1) mg/100 g, respectively. Amygdalin contents of Mibaekdo, Nagasawa Hakuho and Backaha were 486.61, 548.60 and 174.28 µg/g, respectively. Conclusions The results suggest that the unripe fruit of peach has a significant biochemical potential of using as a food supplement with potential health benefit for human health. PMID:25182279

  3. Activated carbon from peach stones using phosphoric acid activation at medium temperatures.

    PubMed

    Kim, Dong-Su

    2004-01-01

    In the present study, the activation features of phosphoric acid have been investigated using waste peach stones as the raw material in the production of granular activated carbon. Thermogravimetry/differential thermal analysis was conducted to characterize the thermal behavior of peach stone and titration method was used to evaluate the adsorption capacity of the produced activated carbon. It was observed that the iodine value of the activated carbon increased with activation temperature. However, temperatures higher than 500 degrees C caused a thermal destruction, which resulted in the decrease of the adsorption capacity. Activation longer than 1.5 h at 500 degrees C resulted in thermal degradation of the porous structure of the activated carbon. The adsorption capacity was enhanced with increasing of amounts of phosphoric acid, however, excessive phosphoric acid caused a decrease in the iodine value. In addition, it was found that the carbon yields generally decreased with activation temperature and activation time. Scanning electron microscopy analysis was conducted to observe the changes in the poros structure of the activated carbon produced in different temperatures. Activation of carbon by phosphoric acid was found to be superior to that by CaCl2 and gas activation. The activated carbon produced from peach stone was applied as an adsorbent in the treatment of synthesized wastewater containing cadmium ion and its adsorption capacity was found to be as good as that of the commercial one.

  4. Identification of proteins from prunus persica that interact with peach latent mosaic viroid.

    PubMed

    Dubé, Audrey; Bisaillon, Martin; Perreault, Jean-Pierre

    2009-12-01

    Peach latent mosaic viroid (PLMVd) is a small, single-stranded, circular RNA pathogen that infects Prunus persica trees. As with all other known viroids, the PLMVd genome does not encode any proteins. Consequently, it must interact with host cellular factors in order to ensure its life cycle. With the objective of identifying cellular proteins that interact with PLMVd, Northwestern hybridizations were performed using partially purified peach leaf extracts. Mass spectrometric analysis of the detected RNA-protein complexes led to the identification of six putative RNA-binding proteins. One of these was found to be elongation factor 1-alpha (eEF1A), and because of its known involvement in the replication and translation of various RNA viruses, further characterizations were performed. Initially, the existence of this interaction received support from an experiment that immunoprecipitated the eEF1A from a crude extract of infected peach leaves, coupled with reverse transcription-PCR detection of the PLMVd. Subsequently, eEF1A interaction with PLMVd strands of both polarities was confirmed in vitro by electrophoresis mobility shift assays, fluorescence spectroscopy, and the prediction of an altered PLMVd RNase mapping profile in the presence of the protein. The potential contribution of eEF1A to the molecular biology of PLMVd, including for viroid replication, is discussed.

  5. Glucitol dehydrogenase from peach (Prunus persica) fruits is regulated by thioredoxin h.

    PubMed

    Hartman, Matías D; Figueroa, Carlos M; Piattoni, Claudia V; Iglesias, Alberto A

    2014-06-01

    Glucitol (Gol) is a major photosynthetic product in plants from the Rosaceae family. Herein we report the molecular cloning, heterologous expression and characterization of Gol dehydrogenase (GolDHase, EC 1.1.1.14) from peach (Prunus persica) fruits. The recombinant enzyme showed kinetic parameters similar to those reported for orthologous enzymes purified from apple and pear fruits. The activity of recombinant GolDHase was strongly inhibited by Cu(2+) and Hg(2+), suggesting that it might have cysteine residues critical for functionality. Oxidizing compounds (such as diamide, hydrogen peroxide and oxidized glutathione) inactivated the enzyme, whereas its activity was restored after incubation with reduced glutathione and thioredoxin from Escherichia coli. Recombinant thioredoxin h from peach fruits also recovered the activity of oxidized GolDHase. Our results suggest that peach fruit GolDHase could be redox regulated in vivo and this would be of relevance to determine carbon assimilation and partitioning in plants accumulating sugar alcohols. © The Author 2014. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

  6. Comparative assessment of physicochemical properties of unripe peach (Prunus persica) and Japanese apricot (Prunus mume).

    PubMed

    Kim, Hye-Ryun; Kim, Il-Doo; Dhungana, Sanjeev Kumar; Kim, Mi-Ok; Shin, Dong-Hyun

    2014-02-01

    To investigate the physicochemical properties of unripe peach-Prunus persica cv. Mibaekdo (Mibaekdo) and Prunus persica cv. Nagasawa Hakuho (Nagasawa Hakuho) as an alternative to food supplement while Japanese apricot (Prunus mume cv. Backaha) (Backaha) was used as a control sample. The unripe fruits were analyzed for soluble solid ( ˚Brix), titratable acidity, pH, total polyphenol content, 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical scavenging activity, amygdalin content, free amino acid content, organic acid content, free sugar content, and α-amylase activities. Total polyphenol content of unripe peach ranged between 137.27-151.64 µg/g whereas that of apricot was 160.73 µg/g. DPPH radical scavenging activities of Backaha was the highest (89.16%) followed by Mibaekdo (85.05%) and Nagasawa Hakuho (41.50%). The highest amount of oxalic acid (612.8 mg/100 g) was observed in Mibaekdo while that of Nagasawa Hakuho and Backaha were (184.6±18.1) and (334.8±16.1) mg/100 g, respectively. Amygdalin contents of Mibaekdo, Nagasawa Hakuho and Backaha were 486.61, 548.60 and 174.28 µg/g, respectively. The results suggest that the unripe fruit of peach has a significant biochemical potential of using as a food supplement with potential health benefit for human health.

  7. Identification of Proteins from Prunus persica That Interact with Peach Latent Mosaic Viroid▿

    PubMed Central

    Dubé, Audrey; Bisaillon, Martin; Perreault, Jean-Pierre

    2009-01-01

    Peach latent mosaic viroid (PLMVd) is a small, single-stranded, circular RNA pathogen that infects Prunus persica trees. As with all other known viroids, the PLMVd genome does not encode any proteins. Consequently, it must interact with host cellular factors in order to ensure its life cycle. With the objective of identifying cellular proteins that interact with PLMVd, Northwestern hybridizations were performed using partially purified peach leaf extracts. Mass spectrometric analysis of the detected RNA-protein complexes led to the identification of six putative RNA-binding proteins. One of these was found to be elongation factor 1-alpha (eEF1A), and because of its known involvement in the replication and translation of various RNA viruses, further characterizations were performed. Initially, the existence of this interaction received support from an experiment that immunoprecipitated the eEF1A from a crude extract of infected peach leaves, coupled with reverse transcription-PCR detection of the PLMVd. Subsequently, eEF1A interaction with PLMVd strands of both polarities was confirmed in vitro by electrophoresis mobility shift assays, fluorescence spectroscopy, and the prediction of an altered PLMVd RNase mapping profile in the presence of the protein. The potential contribution of eEF1A to the molecular biology of PLMVd, including for viroid replication, is discussed. PMID:19759139

  8. Proteomic analysis of a segregant population reveals candidate proteins linked to mealiness in peach.

    PubMed

    Almeida, Andréa Miyasaka; Urra, Claudio; Moraga, Carol; Jego, Marcela; Flores, Alejandra; Meisel, Lee; González, Mauricio; Infante, Rodrigo; Defilippi, Bruno G; Campos-Vargas, Reinaldo; Orellana, Ariel

    2016-01-10

    Peaches are stored at low temperatures to delay ripening and increase postharvest life. However some varieties are susceptible to chilling injury,which leads to fruit mealiness, browning and flesh bleeding. In order to identify potentialmarkers associated with chilling injury,we performed proteomic analyses on a segregating population with contrasting susceptibility to chilling-induced mealiness. Chilling-induced mealiness was assessed by measuring juiciness in fruits that have been stored in cold and then allowed to ripen. Fruitmesocarp and leaf proteome from contrasting segregants were analyzed using 2-DE gels. Comparison of protein abundance between segregants revealed 133 spots from fruit mesocarp and 36 from leaf. Thirty four fruit mesocarp proteins were identified from these spots. Most of these proteins were related to ethylene synthesis, ABA response and stress response. Leaf protein analyses identified 22 proteins, most of which related to energy metabolism. Some of the genes that code for these proteins have been previously correlated with chilling injury through transcript analyses and co-segregation with mealiness QTLs. The results from this study, further deciphers the molecular mechanisms associated with chilling response in peach fruit, and identifies candidate proteins linked to mealiness in peach which may be used as putative markers for this trait.

  9. Proteome approach to characterize proteins induced by antagonist yeast and salicylic acid in peach fruit.

    PubMed

    Chan, Zhulong; Qin, Guozheng; Xu, Xiangbin; Li, Boqiang; Tian, Shiping

    2007-05-01

    Proteins induced by antagonist yeast Pichia membranefaciens and salicylic acid (SA) in peach fruit were determined using proteome analysis in this study. Both the yeast and SA enhanced the resistance of peach fruit and delayed the initiation infection of Penicillium expansum. When quadrupole time-of-flight tandem mass spectrometer was used, a total of 25 proteins could be identified as significantly up- or down-regulated in response to at least one activitor. According to the function, these proteins were attributed to protein metabolism, defense response, transcription, energy metabolism, and cell structure. Among them, 6 antioxidant and 3 pathogenesis-related (PR) proteins were induced by P. membranefaciens or SA treatments. The induction results of these proteins were related to treatment time. Six other proteins were identified as the enzymes which catalyze the reactions of glycolysis and tricarboxylic acid cycle. In addition, both the yeast and SA treatments enhanced the transcript and translation expression of the catalase gene. These results suggested that antioxidant and PR proteins, as well as enzymes associated with sugar metabolism, were involved in resistance of peach fruit induced by P. membranefaciens and SA.

  10. Fermentation Characteristics and Lactic Acid Bacteria Succession of Total Mixed Ration Silages Formulated with Peach Pomace

    PubMed Central

    Hu, Xiaodong; Hao, Wei; Wang, Huili; Ning, Tingting; Zheng, Mingli; Xu, Chuncheng

    2015-01-01

    The objective of this study was to assess the use of peach pomace in total mixed ration (TMR) silages and clarify the differences in aerobic stability between TMR and TMR silages caused by lactic acid bacteria (LAB). The TMR were prepared using peach pomace, alfalfa hay or Leymus chinensis hay, maize meal, soybean meal, cotton meal, limestone, a vitamin-mineral supplement, and salt in a ratio of 6.0:34.0:44.4:7.0:5.0:2.5:1.0:0.1 on a dry matter (DM) basis. Fermentation quality, microbial composition, and the predominant LAB were examined during ensiling and aerobic deterioration. The results indicated that the TMR silages with peach pomace were well fermented, with low pH and high lactic acid concentrations. The aerobic stability of TMR silages were significantly higher than that of TMR. Compared with TMR silages with alfalfa hay, TMR silage with Leymus chinensis hay was much more prone to deterioration. Although the dominant LAB were not identical in TMR, the same dominant species, Lactobacillus buchneri and Pediococcus acidilactici, were found in both types of TMR silages after 56 d of ensiling, and they may play an important role in the aerobic stability of TMR silages. PMID:25656205

  11. Vascular flows and transpiration affect peach (Prunus persica Batsch.) fruit daily growth.

    PubMed

    Morandi, Brunella; Rieger, Mark; Grappadelli, Luca Corelli

    2007-01-01

    The relative contributions of xylem, phloem, and transpiration to fruit growth and the daily patterns of their flows have been determined in peach, during the two stages of rapid diameter increase, by precise and continuous monitoring of fruit diameter variations. Xylem, phloem, and transpiration contributions to growth were quantified by comparing the diurnal patterns of diameter change of fruits, which were then girdled and subsequently detached. Xylem supports peach growth by 70%, and phloem 30%, while transpiration accounts for approximately 60% of daily total inflows. These figures and their diurnal patterns were comparable among years, stages, and cultivars. Xylem was functional at both stage I and III, while fruit transpiration was high and strictly dependent on environmental conditions, causing periods of fruit shrinkage. Phloem imports were correlated to fruit shrinkage and appear to facilitate subsequent fruit enlargement. Peach displays a growth mechanism which can be explained on the basis of passive unloading of photoassimilates from the phloem. A pivotal role is played by the large amount of water flowing from the tree to the fruit and from the fruit to the atmosphere.

  12. Bottom hole oil well pump

    SciTech Connect

    Hansen, J.E.; Hinds, W.E.; Oldershaw, P.V.

    1982-09-21

    A bottom hole well pump is disclosed comprising a pump housing supported by a control cable for raising and lowering the housing within tubing in a well, a linear motor within the housing causing reciprocation of a plunger extending into a pumping chamber formed by the housing with inlet and outlet check valves for controlling flow of oil or other liquid into the pumping chamber and from the pumping chamber into the tubing above the pump housing. In one embodiment, belleville-type springs are employed for storing energy as the plunger approaches its opposite limits of travel in order to initiate movement of the plunger in the opposite direction. In this embodiment, a single pumping chamber is formed above the linear motor with a single-valve block arranged above the pumping chamber and including inlet check valve means for controlling liquid flow into the pumping chamber and outlet check valve means for controlling liquid flow from the pumping chamber into the tubing interior above the pump housing. In another embodiment, pumping chambers are formed above and below the linear motor with a tubular plunger extending into both pumping chambers, in order to achieve pumping during both directions of travel of the plunger.

  13. Discovery and Annotation of Plant Endogenous Target Mimicry Sequences from Public Transcriptome Libraries: A Case Study of Prunus persica.

    PubMed

    Karakülah, Gökhan

    2017-06-28

    Novel transcript discovery through RNA sequencing has substantially improved our understanding of the transcriptome dynamics of biological systems. Endogenous target mimicry (eTM) transcripts, a novel class of regulatory molecules, bind to their target microRNAs (miRNAs) by base pairing and block their biological activity. The objective of this study was to provide a computational analysis framework for the prediction of putative eTM sequences in plants, and as an example, to discover previously un-annotated eTMs in Prunus persica (peach) transcriptome. Therefore, two public peach transcriptome libraries downloaded from Sequence Read Archive (SRA) and a previously published set of long non-coding RNAs (lncRNAs) were investigated with multi-step analysis pipeline, and 44 putative eTMs were found. Additionally, an eTM-miRNA-mRNA regulatory network module associated with peach fruit organ development was built via integration of the miRNA target information and predicted eTM-miRNA interactions. My findings suggest that one of the most widely expressed miRNA families among diverse plant species, miR156, might be potentially sponged by seven putative eTMs. Besides, the study indicates eTMs potentially play roles in the regulation of development processes in peach fruit via targeting specific miRNAs. In conclusion, by following the step-by step instructions provided in this study, novel eTMs can be identified and annotated effectively in public plant transcriptome libraries.

  14. Protective Effect of White-fleshed Peach (Prunus persica (L.) Batsch) on Chronic Nicotine-induced Toxicity

    PubMed Central

    Kim, Hyun-Jeong; Park, Kwang-Kyun; Chung, Won-Yoon; Lee, Sun Kyoung; Kim, Ki-Rim

    2017-01-01

    Background Nicotine is a major toxic component of tobacco smoke and has been recognized as a risk factor to induce oxidative tissue damage, which is a precursor to cardiovascular diseases, lung-related diseases, and cancers. Peaches (Prunus persica) have been used for the treatment of degenerative disorders, such as hypermenorrhea, dysmenorrhea, and infertility in Asian countries. In this study, we investigated the effects of white-fleshed peach on the excretion of nicotine metabolites and 1-hydroxypyrene in smokers and chronic nicotine-induced tissue damages in mice. Methods The concentrations of cotinine and 1-hydroxypyrene were measured in urine of smokers before or after intake of white-fleshed peaches. In addition, ICR mice were injected with nicotine (5 mg/kg body weight) and then orally administered with white-fleshed peach extracts (WFPE) (250 or 500 mg/kg body weight) for 36 days. The oxidative stress parameters and the activities of antioxidant enzymes were measured in liver and kidney tissues. Also, histological changes and nitrotyrosine expression were assessed. Results Intake of white-fleshed peaches increased the urinary concentration of nicotine metabolites and 1-hydroxypyrene in 91.67% and 83.33% of smokers, respectively. WFPE decreased the malondialdehyde levels and recovered the activities of antioxidant enzymes in nicotine-injected mice. In addition, WFPE inhibited nitrotyrosine expression and inflammatory responses in the liver, kidney, and lung tissues of nicotine-treated mice. Conclusions White-fleshed peaches may increase the metabolism of toxic components in tobacco smoke in smokers and protect normal tissues against nicotine toxicity in mice. Therefore, supplementation of white-fleshed peaches might be beneficial to smokers. PMID:28382283

  15. Ecological adaptation of wild peach palm, its in situ conservation and deforestation-mediated extinction in southern Brazilian Amazonia.

    PubMed

    Clement, Charles R; Santos, Ronaldo P; Desmouliere, Sylvain J M; Ferreira, Evandro J L; Neto, João Tomé Farias

    2009-01-01

    The Arc of Fire across southern Amazonia seasonally attracts worldwide attention as forests are cut and burned for agricultural expansion. These forests contain numerous wild relatives of native South American crops, such as peach palm. Our prospecting expeditions examined critical areas for wild peach palm in the Arc of Fire in Mato Grosso, Pará, Maranhão and Tocantins, as well as areas not previously examined in Amazonas and Amapá states. Recent digitization of the RADAM Brasil project permitted comparison among RADAM's parataxonomists' observations, previous botanical collections and our prospecting. Mapping on soils and vegetation types enabled us to hypothesize a set of ecological preferences. Wild peach palm is best adapted to Ultisols (Acrisols) in open forests across the Arc of Fire and westward into the more humid western Amazonia. Populations are generally small (fewer than 10 plants) on slopes above watercourses. In northern Mato Grosso and southern Pará soybean fields and pastures now occupy numerous areas where RADAM identified wild peach palm. The controversial BR-163 Highway is already eroding wild peach palm as deforestation expands. Many of these populations are now isolated by increasing forest fragmentation, which will lead to decreased reproduction via inbreeding depression and eventual extinction even without complete deforestation. Federal conservation areas are less numerous in the Arc of Fire than in other parts of Brazilian Amazonia, although there are indigenous lands; these conservation areas contain viable populations of wild peach palm and require better protection than they are currently receiving. Ex situ conservation of these populations is not viable given the relative lack of importance of domesticated peach palm and the difficulty of maintaining even economically interesting genetic resources.

  16. The study of a SPATULA-like bHLH transcription factor expressed during peach (Prunus persica) fruit development.

    PubMed

    Tani, Eleni; Tsaballa, Aphrodite; Stedel, Catalina; Kalloniati, Chrissanthi; Papaefthimiou, Dimitra; Polidoros, Alexios; Darzentas, Nikos; Ganopoulos, Ioannis; Flemetakis, Emmanouil; Katinakis, Panagiotis; Tsaftaris, Athanasios

    2011-06-01

    Extensive studies on the dry fruits of the model plant arabidopsis (Arabidopsis thaliana) have revealed various gene regulators of the development and dehiscence of the siliques. Peach pericarp is analogous to the valve tissues of the arabidopsis siliques. The stone (otherwise called pit) in drupes is formed through lignification of the fruit endocarp. The lignified endocarp in peach can be susceptible to split-pit formation under certain genetic as well as environmental factors. This phenomenon delays processing of the clingstone varieties of peach and causes economical losses for the peach fruit canning industry. The fruitfull (FUL) and shatterproof (SHP) genes are key MADS-box transcription protein coding factors that control fruit development and dehiscence in arabidopsis by promoting the expression of basic helix-loop-helix (bHLH) transcription factors like Spatula (SPT) and Alcatraz (ALC). Results from our previous studies on peach suggested that temporal regulation of PPERFUL and PPERSHP gene expression may be involved in the regulation of endocarp margin development. In the present study a PPERSPATULA-like (PPERSPT) gene was cloned and characterized. Comparative analysis of temporal regulation of PPERSPT gene expression during pit hardening in a resistant and a susceptible to split-pit variety, suggests that this gene adds one more component to the genes network that controls endocarp margins development in peach. Taking into consideration that no ALC-like genes have been identified in any dicot plant species outside the Brassicaceae family, where arabidopsis belongs, PPERSPT may have additional role(s) in peach that are fulfilled in arabidopsis by ALC.

  17. Ecological Adaptation of Wild Peach Palm, Its In Situ Conservation and Deforestation-Mediated Extinction in Southern Brazilian Amazonia

    PubMed Central

    Clement, Charles R.; Santos, Ronaldo P.; Desmouliere, Sylvain J. M.; Ferreira, Evandro J. L.; Neto, João Tomé Farias

    2009-01-01

    Background The Arc of Fire across southern Amazonia seasonally attracts worldwide attention as forests are cut and burned for agricultural expansion. These forests contain numerous wild relatives of native South American crops, such as peach palm. Methodology/Principal Findings Our prospecting expeditions examined critical areas for wild peach palm in the Arc of Fire in Mato Grosso, Pará, Maranhão and Tocantins, as well as areas not previously examined in Amazonas and Amapá states. Recent digitization of the RADAM Brasil project permitted comparison among RADAM's parataxonomists' observations, previous botanical collections and our prospecting. Mapping on soils and vegetation types enabled us to hypothesize a set of ecological preferences. Wild peach palm is best adapted to Ultisols (Acrisols) in open forests across the Arc of Fire and westward into the more humid western Amazonia. Populations are generally small (fewer than 10 plants) on slopes above watercourses. In northern Mato Grosso and southern Pará soybean fields and pastures now occupy numerous areas where RADAM identified wild peach palm. The controversial BR-163 Highway is already eroding wild peach palm as deforestation expands. Conclusions/Significance Many of these populations are now isolated by increasing forest fragmentation, which will lead to decreased reproduction via inbreeding depression and eventual extinction even without complete deforestation. Federal conservation areas are less numerous in the Arc of Fire than in other parts of Brazilian Amazonia, although there are indigenous lands; these conservation areas contain viable populations of wild peach palm and require better protection than they are currently receiving. Ex situ conservation of these populations is not viable given the relative lack of importance of domesticated peach palm and the difficulty of maintaining even economically interesting genetic resources. PMID:19238213

  18. Self-compatible peach (Prunus persica) has mutant versions of the S haplotypes found in self-incompatible Prunus species.

    PubMed

    Tao, Ryutaro; Watari, Akiko; Hanada, Toshio; Habu, Tsuyoshi; Yaegaki, Hideaki; Yamaguchi, Masami; Yamane, Hisayo

    2007-01-01

    This study demonstrates that self-compatible (SC) peach has mutant versions of S haplotypes that are present in self-incompatible (SI) Prunus species. All three peach S haplotypes, S (1), S (2), and S (2m), found in this study encode mutated pollen determinants, SFB, while only S (2m) has a mutation that affects the function of the pistil determinant S-RNase. A cysteine residue in the C5 domain of the S (2m)-RNase is substituted by a tyrosine residue, thereby reducing RNase stability. The peach SFB mutations are similar to the SFB mutations found in SC haplotypes of sweet cherry (P. avium) and Japanese apricot (P. mume). SFB (1) of the S (1) haplotype, a mutant version of almond (P. dulcis) S (k) haplotype, encodes truncated SFB due to a 155 bp insertion. SFB (2) of the S (2) and S (2m) haplotypes, both of which are mutant versions of the S (a) haplotype in Japanese plum (P. salicina), encodes a truncated SFB due to a 5 bp insertion. Thus, regardless of the functionality of the pistil determinant, all three peach S haplotypes are SC haplotypes. Our finding that peach has mutant versions of S haplotypes that function in almond and Japanese plum, which are phylogenetically close and remote species, respectively, to peach in the subfamily Prunoideae of the Roasaceae, provides insight into the SC/SI evolution in Prunus. We discuss the significance of SC pollen part mutation in peach with special reference to possible differences in the SI mechanisms between Prunus and Solanaceae.

  19. Protective Effect of White-fleshed Peach (Prunus persica (L.) Batsch) on Chronic Nicotine-induced Toxicity.

    PubMed

    Kim, Hyun-Jeong; Park, Kwang-Kyun; Chung, Won-Yoon; Lee, Sun Kyoung; Kim, Ki-Rim

    2017-03-01

    Nicotine is a major toxic component of tobacco smoke and has been recognized as a risk factor to induce oxidative tissue damage, which is a precursor to cardiovascular diseases, lung-related diseases, and cancers. Peaches (Prunus persica) have been used for the treatment of degenerative disorders, such as hypermenorrhea, dysmenorrhea, and infertility in Asian countries. In this study, we investigated the effects of white-fleshed peach on the excretion of nicotine metabolites and 1-hydroxypyrene in smokers and chronic nicotine-induced tissue damages in mice. The concentrations of cotinine and 1-hydroxypyrene were measured in urine of smokers before or after intake of white-fleshed peaches. In addition, ICR mice were injected with nicotine (5 mg/kg body weight) and then orally administered with white-fleshed peach extracts (WFPE) (250 or 500 mg/kg body weight) for 36 days. The oxidative stress parameters and the activities of antioxidant enzymes were measured in liver and kidney tissues. Also, histological changes and nitrotyrosine expression were assessed. Intake of white-fleshed peaches increased the urinary concentration of nicotine metabolites and 1-hydroxypyrene in 91.67% and 83.33% of smokers, respectively. WFPE decreased the malondialdehyde levels and recovered the activities of antioxidant enzymes in nicotine-injected mice. In addition, WFPE inhibited nitrotyrosine expression and inflammatory responses in the liver, kidney, and lung tissues of nicotine-treated mice. White-fleshed peaches may increase the metabolism of toxic components in tobacco smoke in smokers and protect normal tissues against nicotine toxicity in mice. Therefore, supplementation of white-fleshed peaches might be beneficial to smokers.

  20. Antioxidant capacity, quality, and anthocyanin and nutrient contents of several peach cultivars [Prunus persica (L.) Batsch] grown in Spain.

    PubMed

    Reig, G; Iglesias, I; Gatius, F; Alegre, S

    2013-07-03

    Antioxidant capacity, quality, and anthocyanin and nutrient contents of 106 peach cultivars from different breeding programs were evaluated at the Estació Experimental de Lleida, IRTA (Catalonia, Spain), during two growing seasons (2010 and 2011). High variability was found among cultivars within each quality trait, where different cultivars were scored as the best and the worst. For example, a 5-fold range (2.17-12.07 g of malic acid L⁻¹), 6-fold range (144.20-711.73 μg of Trolox g⁻¹ of FW), and 11-fold range (0.70-11.43 mg of cyanidin-3-glucoside kg⁻¹ of FW) were observed in titratable acidity, relative antioxidant capacity, and anthocyanin content, respectively. The breeding program within each fruit type (melting peach, nectarine, and flat peach) and qualitative pomological traits also had significant effects on the quality. Nevertheless, each breeding program had specific characteristics that distinguished it from the others. Even so, within each breeding program, there is high variability among cultivars. Therefore, growers should not base their strategy exclusively on the choice of breeding program. Principal component analysis for each fruit type (melting peach, nectarine, nonmelting peach, and flat peach) allowed a selection of a set of cultivars from different breeding programs with the highest quality performance. For example, cultivars such as 'Azurite', 'IFF 1230', 'Amiga', 'Fire Top', 'African Bonnigold', 'Ferlot', 'Mesembrine', and 'Platifirst' had higher sweetness and flavor compared to the others. Therefore, this study could help breeders to make decisions for the selection of new cultivars able to improve the quality features of fruit intake, technicians to know better quality performance of peach cultivars, and consumers to meet their expectations for fruit with high health benefits and a specific taste.

  1. PpYUC11, a strong candidate gene for the stony hard phenotype in peach (Prunus persica L. Batsch), participates in IAA biosynthesis during fruit ripening.

    PubMed

    Pan, Lei; Zeng, Wenfang; Niu, Liang; Lu, Zhenhua; Liu, Hui; Cui, Guochao; Zhu, Yunqin; Chu, Jinfang; Li, Weiping; Fang, Weichao; Cai, Zuguo; Li, Guohuai; Wang, Zhiqiang

    2015-12-01

    High concentrations of indole-3-acetic acid (IAA) are required for climacteric ethylene biosynthesis to cause fruit softening in melting flesh peaches at the late ripening stage. By contrast, the fruits of stony hard peach cultivars do not soften and produce little ethylene due to the low IAA concentrations. To investigate the regulation of IAA accumulation during peach ripening [the transition from stage S3 to stage S4 III (climacteric)], a digital gene expression (DGE) analysis was performed. The expression patterns of auxin-homeostasis-related genes were compared in fruits of the melting flesh peach 'Goldhoney 3' and the stony hard flesh peach 'Yumyeong' during the ripening stage. It is revealed here that a YUCCA flavin mono-oxygenase gene (PpYUC11, ppa008176m), a key gene in auxin biosynthesis, displayed an identical differential expression profile to the profiles of IAA accumulation and PpACS1 transcription: the mRNA transcripts increased at the late ripening stage in melting flesh peaches but were below the limit of detection in mature fruits of stony hard peaches. In addition, the strong association between intron TC microsatellite genotypes of PpYUC11 and the flesh texture (normal or stony hard) is described in 43 peach varieties, indicating that this locus may be responsible for the stony hard phenotype in peach. These findings support the hypothesis that PpYUC11 may play an essential role in auxin biosynthesis during peach fruit ripening and is a candidate gene for the control of the stony hard phenotype in peach. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology.

  2. PpYUC11, a strong candidate gene for the stony hard phenotype in peach (Prunus persica L. Batsch), participates in IAA biosynthesis during fruit ripening

    PubMed Central

    Pan, Lei; Zeng, Wenfang; Niu, Liang; Lu, Zhenhua; Liu, Hui; Cui, Guochao; Zhu, Yunqin; Chu, Jinfang; Li, Weiping; Fang, Weichao; Cai, Zuguo; Li, Guohuai; Wang, Zhiqiang

    2015-01-01

    High concentrations of indole-3-acetic acid (IAA) are required for climacteric ethylene biosynthesis to cause fruit softening in melting flesh peaches at the late ripening stage. By contrast, the fruits of stony hard peach cultivars do not soften and produce little ethylene due to the low IAA concentrations. To investigate the regulation of IAA accumulation during peach ripening [the transition from stage S3 to stage S4 III (climacteric)], a digital gene expression (DGE) analysis was performed. The expression patterns of auxin-homeostasis-related genes were compared in fruits of the melting flesh peach ‘Goldhoney 3’ and the stony hard flesh peach ‘Yumyeong’ during the ripening stage. It is revealed here that a YUCCA flavin mono-oxygenase gene (PpYUC11, ppa008176m), a key gene in auxin biosynthesis, displayed an identical differential expression profile to the profiles of IAA accumulation and PpACS1 transcription: the mRNA transcripts increased at the late ripening stage in melting flesh peaches but were below the limit of detection in mature fruits of stony hard peaches. In addition, the strong association between intron TC microsatellite genotypes of PpYUC11 and the flesh texture (normal or stony hard) is described in 43 peach varieties, indicating that this locus may be responsible for the stony hard phenotype in peach. These findings support the hypothesis that PpYUC11 may play an essential role in auxin biosynthesis during peach fruit ripening and is a candidate gene for the control of the stony hard phenotype in peach. PMID:26307136

  3. Characterization of a Louisiana Bay Bottom

    NASA Astrophysics Data System (ADS)

    Freeman, A. M.; Roberts, H. H.

    2016-02-01

    This study correlates side-scan sonar and CHIRP water bottom-subbottom acoustic amplitudes with cone penetrometer data to expand the limited understanding of the geotechnical properties of sediments in coastal Louisiana's bays. Standardized analysis procedures were developed to characterize the bay bottom and shallow subsurface of the Sister Lake bay bottom. The CHIRP subbottom acoustic data provide relative amplitude information regarding reflection horizons of the bay bottom and shallow subsurface. An amplitude analysis technique was designed to identify different reflectance regions within the lake from the CHIRP subbottom profile data. This amplitude reflectivity analysis technique provides insight into the relative hardness of the bay bottom and shallow subsurface, useful in identifying areas of erosion versus deposition from storms, as well as areas suitable for cultch plants for state oyster seed grounds, or perhaps other restoration projects. Side-scan and CHIRP amplitude reflectivity results are compared to penetrometer data that quantifies geotechnical properties of surface and near-surface sediments. Initial results indicate distinct penetrometer signatures that characterize different substrate areas including soft bottom, storm-deposited silt-rich sediments, oyster cultch, and natural oyster reef areas. Although amplitude analysis of high resolution acoustic data does not directly quantify the geotechnical properties of bottom sediments, our analysis indicates a close relationship. The analysis procedures developed in this study can be applied in other dynamic coastal environments, "calibrating" the use of synoptic acoustic methods for large-scale water bottom characterization.

  4. Peach maturity/quality assessment using hyperspectral imaging-based spatially resolved technique

    NASA Astrophysics Data System (ADS)

    Cen, Haiyan; Lu, Renfu; Mendoza, Fernando A.; Ariana, Diwan P.

    2011-06-01

    The objective of this research was to measure the absorption (μa) and reduced scattering coefficients (μs') of peaches, using a hyperspectral imaging-based spatially-resolved method, for their maturity/quality assessment. A newly developed optical property measuring instrument was used for acquiring hyperspectral reflectance images of 500 'Redstar' peaches. μa and μs' spectra for 515-1,000 nm were extracted from the spatially-resolved reflectance profiles using a diffusion model coupled with an inverse algorithm. The absorption spectra of peach fruit presented several absorption peaks around 525 nm for anthocyanin, 620 nm for chlorophyll-b, 675 nm for chlorophyll-a, and 970 nm for water, while μs' decreased consistently with the increase of wavelength for most of the tested samples. Both μa and μs' were correlated with peach firmness, soluble solids content (SSC), and skin and flesh color parameters. Better prediction results for partial least squares models were obtained using the combined values of μa and μs' (i.e., μa × μs' and μeff) than using μa or μs', where μeff = [3 μa (μa + μs')]1/2 is the effective attenuation coefficient. The results were further improved using least squares support vector machine models with values of the best correlation coefficient for firmness, SSC, skin lightness and flesh lightness being 0.749 (standard error of prediction or SEP = 17.39 N), 0.504 (SEP = 0.92 °Brix), 0.898 (SEP = 3.45), and 0.741 (SEP = 3.27), respectively. These results compared favorably to acoustic and impact firmness measurements with the correlation coefficient of 0.639 and 0.631, respectively. Hyperspectral imaging-based spatially-resolved technique is useful for measuring the optical properties of peach fruit, and it also has good potential for assessing fruit maturity/quality attributes.

  5. A ocean bottom vector magnetometer

    NASA Astrophysics Data System (ADS)

    Wang, Xiaomei; Teng, Yuntian; Wang, Chen; Ma, Jiemei

    2017-04-01

    The new development instrument with a compact spherical coil system and Overhauser magnetometer for measuring the total strength of the magnetic field and the vectors of strength, Delta inclination - Delta declination, meanwhile we also use a triaxial fluxgate instrument of the traditional instrument for geomagnetic vector filed measurement. The advantages of this method are be calibrated by each other and get good performances with automatic operation, good stability and high resolution. Firstly, a brief description of the instrument measurement principles and the key technologies are given. The instrument used a spherical coil system with 34 coils to product the homogeneous volume inside the coils which is large enough to accommodate the sensor of Overhauser total field sensor; the rest of the footlocker-sized ocean-bottom vector magnetometer consists of equipment to run the sensors and records its data (batteries and a data logger), weight to sink it to the sea floor, a remote-controlled acoustic release and flotation to bring the instrument back to the surface. Finally, the accuracy of the instrument was tested in the Geomagnetic station, and the measurement accuracies of total strength and components were better than 0.2nT and 1nT respectively. The figure 1 shows the development instrument structure. it includes six thick glass spheres which protect the sensor, data logger and batteries from the pressures of the deep sea, meanwhile they also provide recycling positive buoyancy; To cushion the glass, the spheres then go inside yellow plastic "hardhats". The triaxial fluxgate is inside No.1 glass spheres, data logger and batteries are inside No.2 glass spheres, the new vector sensor is inside No.3 glass spheres, acoustic communication unit is inside No.4 glass spheres, No.5 and No.6 glass spheres are empty which only provide recycling positive buoyancy. The figure 2 shows the development instrument Physical photo.

  6. Determination of fruit maturity and its prediction model based on the pericarp index of absorbance difference (IAD) for peaches

    PubMed Central

    Zhang, Binbin; Peng, Bin; Zhang, Chunhua; Song, Zhizhong

    2017-01-01

    Harvest maturity is closely related to peach fruit quality and has a very important effect on the fresh fruit market. Unfortunately, at present, it is difficult to determine the maturity level of peach fruits by artificial methods. The objectives of this study were to develop quadratic polynomial regression models using near-infrared spectroscopy that could determine the peel color difference, fruit firmness, soluble solids content (SSC), soluble sugar, organic acid components, and their relationships with the absorbance of chlorophyll (index of absorbance difference, IAD) in late maturing ‘Xiahui 8’ peach and ‘Xiaguang’ nectarine fruits. The analysis was based on data for fruits at veraison, fruits at harvesting maturity, and all fruits. The results showed that firmness has the highest correlation coefficient with IAD. Prediction models for fruit maturity were established between firmness and the IAD of the two cultivars using the quadratic polynomial regression method. Further variance analysis on the one degree term and quadratic term of each equation showed that every partial regression coefficient reached a significant or extremely significant level. No significant difference was observed between estimated and observed values after regression prediction. The regression equations seem to fit well. Other peach and nectarine varieties were used to test the feasibility of maturity prediction by this method, and it was found that maturity was successfully predicted in all the samples. The result indicated that the IAD can be used as an index to predict peach fruit maturity. PMID:28505165

  7. Determination of fruit maturity and its prediction model based on the pericarp index of absorbance difference (IAD) for peaches.

    PubMed

    Zhang, Binbin; Peng, Bin; Zhang, Chunhua; Song, Zhizhong; Ma, Ruijuan

    2017-01-01

    Harvest maturity is closely related to peach fruit quality and has a very important effect on the fresh fruit market. Unfortunately, at present, it is difficult to determine the maturity level of peach fruits by artificial methods. The objectives of this study were to develop quadratic polynomial regression models using near-infrared spectroscopy that could determine the peel color difference, fruit firmness, soluble solids content (SSC), soluble sugar, organic acid components, and their relationships with the absorbance of chlorophyll (index of absorbance difference, IAD) in late maturing 'Xiahui 8' peach and 'Xiaguang' nectarine fruits. The analysis was based on data for fruits at veraison, fruits at harvesting maturity, and all fruits. The results showed that firmness has the highest correlation coefficient with IAD. Prediction models for fruit maturity were established between firmness and the IAD of the two cultivars using the quadratic polynomial regression method. Further variance analysis on the one degree term and quadratic term of each equation showed that every partial regression coefficient reached a significant or extremely significant level. No significant difference was observed between estimated and observed values after regression prediction. The regression equations seem to fit well. Other peach and nectarine varieties were used to test the feasibility of maturity prediction by this method, and it was found that maturity was successfully predicted in all the samples. The result indicated that the IAD can be used as an index to predict peach fruit maturity.

  8. An integrative “omics” approach identifies new candidate genes to impact aroma volatiles in peach fruit

    PubMed Central

    2013-01-01

    Background Ever since the recent completion of the peach genome, the focus of genetic research in this area has turned to the identification of genes related to important traits, such as fruit aroma volatiles. Of the over 100 volatile compounds described in peach, lactones most likely have the strongest effect on fruit aroma, while esters, terpenoids, and aldehydes have minor, yet significant effects. The identification of key genes underlying the production of aroma compounds is of interest for any fruit-quality improvement strategy. Results Volatile (52 compounds) and gene expression (4348 genes) levels were profiled in peach fruit from a maturity time-course series belonging to two peach genotypes that showed considerable differences in maturation characteristics and postharvest ripening. This data set was analyzed by complementary correlation-based approaches to discover the genes related to the main aroma-contributing compounds: lactones, esters, and phenolic volatiles, among others. As a case study, one of the candidate genes was cloned and expressed in yeast to show specificity as an ω-6 Oleate desaturase, which may be involved in the production of a precursor of lactones/esters. Conclusions Our approach revealed a set of genes (an alcohol acyl transferase, fatty acid desaturases, transcription factors, protein kinases, cytochromes, etc.) that are highly associated with peach fruit volatiles, and which could prove useful in breeding or for biotechnological purposes. PMID:23701715

  9. Agronomical Parameters, Sugar Profile and Antioxidant Compounds of “Catherine” Peach Cultivar Influenced by Different Plum Rootstocks

    PubMed Central

    Font i Forcada, Carolina; Gogorcena, Yolanda; Moreno, María Ángeles

    2014-01-01

    The influence of seven plum rootstocks (Adesoto, Monpol, Montizo, Puebla de Soto 67 AD, PM 105 AD, St. Julien GF 655/2 and Constantí 1) on individual and total sugars, as well as on antioxidant content in fruit flesh of “Catherine” peaches, was evaluated for three years. Agronomical and basic fruit quality parameters were also determined. At twelve years after budding, significant differences were found between rootstocks for the different agronomic and fruit quality traits evaluated. The Pollizo plum rootstocks Adesoto and PM 105 AD seem to induce higher sweetness to peach fruits, based on soluble solids content, individual (sucrose, fructose and sorbitol) and total sugars. A clear tendency was also observed with the rootstock Adesoto, inducing the highest content of phenolics, flavonoids, vitamin C and relative antioxidant capacity (RAC). Thus, the results of this study demonstrate the significant effect of rootstock on the sugar profile and phytochemical characteristics of peach fruits. In addition, this work shows the importance of the sugar profile, because specific sugars play an important role in peach flavour quality, as well as the studied phytochemical compounds when looking for high quality peaches with enhanced health properties. PMID:24496242

  10. Gene Expression Changes during the Gummosis Development of Peach Shoots in Response to Lasiodiplodia theobromae Infection Using RNA-Seq

    PubMed Central

    Gao, Lei; Wang, Yuting; Li, Zhi; Zhang, He; Ye, Junli; Li, Guohuai

    2016-01-01

    Lasiodiplodia theobromae is a causal agent of peach (Prunus persica L.) tree gummosis, a serious disease affecting peach cultivation and production. However, the molecular mechanism underlying the pathogenesis remains unclear. RNA-Seq was performed to investigate gene expression in peach shoots inoculated or mock-inoculated with L. theobromae. A total of 20772 genes were detected in eight samples; 4231, 3750, 3453, and 3612 differentially expressed genes were identified at 12, 24, 48, and 60 h after inoculation, respectively. Furthermore, 920 differentially co-expressed genes (515 upregulated and 405 downregulated) were found, respectively. Gene ontology annotation revealed that phenylpropanoid biosynthesis and metabolism, uridine diphosphate-glucosyltransferase activity, and photosynthesis were the most differentially regulated processes during gummosis development. Significant differences were also found in the expression of genes involved in glycometabolism and in ethylene and jasmonic acid biosynthesis and signaling. These data illustrate the dynamic changes in gene expression in the inoculated peach shoots at the transcriptome level. Overall, gene expression in defense response and glycometabolism might result in the gummosis of peach trees induced by L. theobromae. PMID:27242544

  11. Construction of a genetic linkage map for identification of molecular markers associated with resistance to Xanthomonas arboriciola pv. pruni in peach [Prunus persica (L.) Batsch

    USDA-ARS?s Scientific Manuscript database

    Bacterial spot, caused by Xanthomonas campestris pv. pruni, is a serious disease that can affect peach fruit quality and production. The molecular basis of its tolerance and susceptibility is yet to be understood. To study the genetics of the peach in response to bacterial spot, an F2 population of ...

  12. Bottom-up multiferroic nanostructures

    NASA Astrophysics Data System (ADS)

    Ren, Shenqiang

    Multiferroic and especially magnetoelectric (ME) nanocomposites have received extensive attention due to their potential applications in spintronics, information storage and logic devices. The extrinsic ME coupling in composites is strain mediated via the interface between the piezoelectric and magnetostrictive components. However, the design and synthesis of controlled nanostructures with engineering enhanced coupling remain a significant challenge. The purpose of this thesis is to create nanostructures with very large interface densities and unique connectivities of the two phases in a controlled manner. Using inorganic solid state phase transformations and organic block copolymer self assembly methodologies, we present novel self assembly "bottom-up" techniques as a general protocol for the nanofabrication of multifunctional devices. First, Lead-Zirconium-Titanate/Nickel-Ferrite (PZT/NFO) vertical multilamellar nanostructures have been produced by crystallizing and decomposing a gel in a magnetic field below the Curie temperature of NFO. The ensuing microstructure is nanoscopically periodic and anisotropic. The wavelength of the PZT/NFO alternation, 25 nm, agrees within a factor of two with the theoretically estimated value. The macroscopic ferromagnetic and magnetoelectric responses correspond qualitatively and semi-quantitatively to the features of the nanostructure. The maximum of the field dependent magnetoelectric susceptibility equals 1.8 V/cm Oe. Second, a magnetoelectric composite with controlled nanostructures is synthesized using co-assembly of two inorganic precursors with a block copolymer. This solution processed material consists of hexagonally arranged ferromagnetic cobalt ferrite (CFO) nano-cylinders within a matrix of ferroelectric Lead-Zirconium-Titanate (PZT). The initial magnetic permeability of the self-assembled CFO/PZT nanocomposite changes by a factor of 5 through the application of 2.5 V. This work may have significant impact on the

  13. Tsunami Energy, Ocean-Bottom Pressure, and Hydrodynamic Force from Stochastic Bottom Displacement

    NASA Astrophysics Data System (ADS)

    Ramadan, Khaled T.; Omar, M. A.; Allam, Allam A.

    2017-03-01

    Tsunami generation and propagation due to a randomly fluctuating of submarine earthquake modeled by vertical time-dependent of a stochastic bottom displacement are investigated. The increase in oscillations and amplitude in the free surface elevation are controlled by the noise intensity parameter of the stochastic bottom displacement. Evolution of kinetic and potential energy of the resulting waves by the stochastic bottom displacement is examined. Exchange between potential and kinetic energy was achieved in the propagation process. The dynamic ocean-bottom pressure during tsunami generation is investigated. As the vertical displacement of the stochastic bottom increases, the peak amplitude of the ocean-bottom pressure increases through the dynamic effect. Time series of the maximum tsunami wave amplitude, kinetic and potential energy, wave and ocean-bottom pressure gauges and the hydrodynamic force caused by the stochastic source model under the effect of the water depth of the ocean are investigated.

  14. 50 kHz bottom backscattering measurements from two types of artificially roughened sandy bottoms

    NASA Astrophysics Data System (ADS)

    Son, Su-Uk; Cho, Sungho; Choi, Jee Woong

    2016-07-01

    Laboratory measurements of 50 kHz bottom backscattering strengths as a function of grazing angle were performed on the sandy bottom of a water tank; two types of bottom roughnesses, a relatively smooth interface and a rough interface, were created on the bottom surface. The roughness profiles of the two interface types were measured directly using an ultrasound arrival time difference of 5 MHz and then were Fourier transformed to obtain the roughness power spectra. The measured backscattering strengths increased from -29 to 0 dB with increasing grazing angle from 35 to 86°, which were compared to theoretical backscattering model predictions. The comparison results implied that bottom roughness is a key factor in accurately predicting bottom scattering for a sandy bottom.

  15. Draft Genome Sequence of Two Strains of Xanthomonas arboricola Isolated from Prunus persica Which Are Dissimilar to Strains That Cause Bacterial Spot Disease on Prunus spp.

    PubMed Central

    Garita-Cambronero, Jerson; Palacio-Bielsa, Ana; López, María M.

    2016-01-01

    The draft genome sequences of two strains of Xanthomonas arboricola, isolated from asymptomatic peach trees in Spain, are reported here. These strains are avirulent and do not belong to the same phylogroup as X. arboricola pv. pruni, a causal agent of bacterial spot disease of stone fruits and almonds. PMID:27609931

  16. Evaluation of the antioxidant capacity, phenolic compounds, and vitamin C content of different peach and nectarine [ Prunus persica (L.) Batsch] breeding progenies.

    PubMed

    Cantín, Celia M; Moreno, María A; Gogorcena, Yolanda

    2009-06-10

    Antioxidant capacity and contents of total phenolics, anthocyanins, flavonoids, and vitamin C were evaluated in 218 genotypes from 15 peach and nectarine breeding progenies. Significant differences were found among progenies on the fruit antioxidant profile, corroborated by the high contribution showed by cross to the phenotypic variance of each phytochemical trait analyzed (16-45%). Phytochemical profile varied depending on peach/nectarine and yellow/white flesh color qualitative traits. On the other hand, no significant effect of year was found on the bioactive profile of peaches and nectarines. Antioxidant capacity was linearly correlated to total phenolic content, but correlation varied depending on the progeny. No correlation was found for vitamin C versus any other phytochemical trait. The results suggest the importance of genetic background on the antioxidant profile of peaches and nectarines and stress its relevance for the ultimate objective of this work: selecting new peach and nectarine genotypes rich in bioactive compounds to benefit consumer's health.

  17. Pipeline bottoming cycle study. Final report

    SciTech Connect

    Not Available

    1980-06-01

    The technical and economic feasibility of applying bottoming cycles to the prime movers that drive the compressors of natural gas pipelines was studied. These bottoming cycles convert some of the waste heat from the exhaust gas of the prime movers into shaft power and conserve gas. Three typical compressor station sites were selected, each on a different pipeline. Although the prime movers were different, they were similar enough in exhaust gas flow rate and temperature that a single bottoming cycle system could be designed, with some modifications, for all three sites. Preliminary design included selection of the bottoming cycle working fluid, optimization of the cycle, and design of the components, such as turbine, vapor generator and condensers. Installation drawings were made and hardware and installation costs were estimated. The results of the economic assessment of retrofitting bottoming cycle systems on the three selected sites indicated that profitability was strongly dependent upon the site-specific installation costs, how the energy was used and the yearly utilization of the apparatus. The study indicated that the bottoming cycles are a competitive investment alternative for certain applications for the pipeline industry. Bottoming cycles are technically feasible. It was concluded that proper design and operating practices would reduce the environmental and safety hazards to acceptable levels. The amount of gas that could be saved through the year 2000 by the adoption of bottoming cycles for two different supply projections was estimated as from 0.296 trillion ft/sup 3/ for a low supply projection to 0.734 trillion ft/sup 3/ for a high supply projection. The potential market for bottoming cycle equipment for the two supply projections varied from 170 to 500 units of varying size. Finally, a demonstration program plan was developed.

  18. Differential expression of peach ERF transcriptional activators in response to signaling molecules and inoculation with Xanthomonas campestris pv. pruni.

    PubMed

    Sherif, S; El-Sharkawy, I; Paliyath, G; Jayasankar, S

    2012-05-01

    Ethylene response factors (ERFs) are a large family of transcription factors (TFs) that have diverse functions in plant development and immunity. However, very little is known about the molecular regulation of these TFs in stone fruits during disease incidence. In the present study, we describe the identification of five peach ERFs (Pp-ERFs), aiming to elucidate their potential roles in defense against Xanthomonas campestris pv. pruni (Xcp), the causal agent of bacterial spot disease. The phylogenetic analysis along with sequence comparisons indicated that all Pp-ERFs are transcriptional activators belonging to groups IX and IIV ERFs. The transactivation capacity of these proteins was verified in vivo where they all induced the expression of the GUS reporter gene and in a GCC-dependent manner. The nuclear localization was also confirmed for two of these proteins, Pp-ERF2.b and Pp-ERF2.c, after their transient expression in onion epidermal cells. The induction kinetics of Pp-ERFs after inoculation with Xcp was determined by qRT-PCR. Except for Pp-ERF2.b, transcript levels of Pp-ERFs increased strongly and rapidly in the resistant 'Venture' compared to the susceptible 'BabyGold 5' cultivar after infection with Xcp. In contrast, the expression of Pp-ERF2.b was several-fold higher in the susceptible cultivar after bacterial infection. The expression of Pp-ERFs was also monitored after treating with signaling compounds; salicylic acid (SA) (1 mM), ethephon (1 mM) and methyl jasmonate (MeJA) (50 μM). Although the results generally emphasize the role of ethylene/jasmonic acid (ET/JA) signaling pathways in regulating the expression of Pp-ERFs, there was a coordination of the timing of ET/JA responses, suggesting compensatory rather than synergistic interactions between these pathways during defense against Xcp. Copyright © 2012 Elsevier GmbH. All rights reserved.

  19. Liquid chromatography/mass spectrometry investigation of the impact of thermal processing and storage on peach procyanidins.

    PubMed

    Hong, Yun-Jeong; Barrett, Diane M; Mitchell, Alyson E

    2004-04-21

    Normal-phase liquid chromatography/mass spectrometry (LC/MS) was used to determine the levels and fate of procyanidins in frozen and canned Ross clingstone peaches as well as in the syrup used in the canning over a 3 month period. Procyanidin oligomers, monomers through undecamers, were identified in Ross clingstone peaches. Optimized methods allowed for the quantitation of oligomers through octamers. The profile of procyanidins in peaches is similar to profiles found in grapes, chocolate, and beverages linked to health benefits such as tea and wine. The monomer content in frozen peeled peaches was found to be 19.59 mg/kg. Dimers (39.59 mg/kg) and trimers (38.81 mg/kg) constituted the largest percent composition of oligomers in the peaches. Tetramers through octamers were present in levels of 17.81, 12.43, 10.62, 3.94 and 1.75 mg/kg, respectively. Thermal processing resulted in an 11% reduction in monomers, a 9% reduction in dimers, a 12% reduction in trimers, a 6% reduction in tetramers, and a 5% reduction in pentamers. Hexamers and heptamers demonstrated an approximate 30% loss, and octamers were no longer detected. Analysis of the syrup after thermal processing indicates that there is a migration of procyanidin monomers through hexamers into the syrup that can account for the losses observed during the canning process. Storage of canned peaches for 3 months demonstrated a time-related loss in higher oligomers and that by 3 months oligomers larger than tetramers are not observed. At 3 months postcanning, levels of monomers had decreased by 10%, dimers by 16%, trimers by 45%, and tetramers by 80%. A similar trend was observed in the canning syrup.

  20. Managed Bumblebees Outperform Honeybees in Increasing Peach Fruit Set in China: Different Limiting Processes with Different Pollinators

    PubMed Central

    Williams, Paul H.; Vaissière, Bernard E.; Zhou, Zhiyong; Gai, Qinbao; Dong, Jie; An, Jiandong

    2015-01-01

    Peach Prunus persica (L.) Batsch is self-compatible and largely self-fertile, but under greenhouse conditions pollinators must be introduced to achieve good fruit set and quality. Because little work has been done to assess the effectiveness of different pollinators on peach trees under greenhouse conditions, we studied ‘Okubo’ peach in greenhouse tunnels near Beijing between 2012 and 2014. We measured pollen deposition, pollen-tube growth rates, ovary development, and initial fruit set after the flowers were visited by either of two managed pollinators: bumblebees, Bombus patagiatus Nylander, and honeybees, Apis mellifera L. The results show that B. patagiatus is more effective than A. mellifera as a pollinator of peach in greenhouses because of differences in two processes. First, B. patagiatus deposits more pollen grains on peach stigmas than A. mellifera, both during a single visit and during a whole day of open pollination. Second, there are differences in the fertilization performance of the pollen deposited. Half of the flowers visited by B. patagiatus are fertilized 9–11 days after bee visits, while for flowers visited by A. mellifera, half are fertilized 13–15 days after bee visits. Consequently, fruit development is also accelerated by bumblebees, showing that the different pollinators have not only different pollination efficiency, but also influence the subsequent time course of fertilization and fruit set. Flowers visited by B. patagiatus show faster ovary growth and ultimately these flowers produce more fruit. Our work shows that pollinators may influence fruit production beyond the amount of pollen delivered. We show that managed indigenous bumblebees significantly outperform introduced honeybees in increasing peach initial fruit set under greenhouse conditions. PMID:25799170