Coupling between interface and velocity perturbations in the weakly nonlinear Rayleigh-Taylor instability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, L. F.; Ye, W. H.; He, X. T.

2012-11-15

Weakly nonlinear (WN) Rayleigh-Taylor instability (RTI) initiated by single-mode cosinusoidal interface and velocity perturbations is investigated analytically up to the third order. Expressions of the temporal evolutions of the amplitudes of the first three harmonics are derived. It is shown that there are coupling between interface and velocity perturbations, which plays a prominent role in the WN growth. When the 'equivalent amplitude' of the initial velocity perturbation, which is normalized by its linear growth rate, is compared to the amplitude of the initial interface perturbation, the coupling between them dominates the WN growth of the RTI. Furthermore, the RTI wouldmore » be mitigated by initiating a velocity perturbation with a relative phase shift against the interface perturbation. More specifically, when the phase shift between the interface perturbation and the velocity perturbation is {pi} and their equivalent amplitudes are equal, the RTI could be completely quenched. If the equivalent amplitude of the initial velocity perturbation is equal to the initial interface perturbation, the difference between the WN growth of the RTI initiated by only an interface perturbation and by only a velocity perturbation is found to be asymptotically negligible. The dependence of the WN growth on the Atwood numbers and the initial perturbation amplitudes is discussed. In particular, we investigate the dependence of the saturation amplitude (time) of the fundamental mode on the Atwood numbers and the initial perturbation amplitudes. It is found that the Atwood numbers and the initial perturbation amplitudes play a crucial role in the WN growth of the RTI. Thus, it should be included in applications where the seeds of the RTI have velocity perturbations, such as inertial confinement fusion implosions and supernova explosions.« less

Bell-Plesset effects in Rayleigh-Taylor instability of finite-thickness spherical and cylindrical shells

DOE Office of Scientific and Technical Information (OSTI.GOV)

Velikovich, A. L.; Schmit, P. F.

Bell-Plesset (BP) effects account for the influence of global convergence or divergence of the fluid flow on the evolution of the interfacial perturbations embedded in the flow. The development of the Rayleigh-Taylor instability in radiation-driven spherical capsules and magnetically-driven cylindrical liners necessarily includes a significant contribution from BP effects due to the time dependence of the radius, velocity, and acceleration of the unstable surfaces or interfaces. An analytical model is presented that, for an ideal incompressible fluid and small perturbation amplitudes, exactly evaluates the BP effects in finite-thickness shells through acceleration and deceleration phases. The time-dependent dispersion equations determining themore » “instantaneous growth rate” are derived. It is demonstrated that by integrating this approximate growth rate over time, one can accurately evaluate the number of perturbation e-foldings during the inward acceleration phase of the implosion. As a result, in the limit of small shell thickness, exact thin-shell perturbationequations and approximate thin-shell dispersion equations are obtained, generalizing the earlier results [E. G. Harris, Phys. Fluids 5, 1057 (1962); E. Ott, Phys. Rev. Lett. 29, 1429 (1972); A. B. Bud'ko et al., Phys. Fluids B 2, 1159 (1990)].« less

Bell-Plesset effects in Rayleigh-Taylor instability of finite-thickness spherical and cylindrical shells

DOE PAGES

Velikovich, A. L.; Schmit, P. F.

2015-12-28

Bell-Plesset (BP) effects account for the influence of global convergence or divergence of the fluid flow on the evolution of the interfacial perturbations embedded in the flow. The development of the Rayleigh-Taylor instability in radiation-driven spherical capsules and magnetically-driven cylindrical liners necessarily includes a significant contribution from BP effects due to the time dependence of the radius, velocity, and acceleration of the unstable surfaces or interfaces. An analytical model is presented that, for an ideal incompressible fluid and small perturbation amplitudes, exactly evaluates the BP effects in finite-thickness shells through acceleration and deceleration phases. The time-dependent dispersion equations determining themore » “instantaneous growth rate” are derived. It is demonstrated that by integrating this approximate growth rate over time, one can accurately evaluate the number of perturbation e-foldings during the inward acceleration phase of the implosion. As a result, in the limit of small shell thickness, exact thin-shell perturbationequations and approximate thin-shell dispersion equations are obtained, generalizing the earlier results [E. G. Harris, Phys. Fluids 5, 1057 (1962); E. Ott, Phys. Rev. Lett. 29, 1429 (1972); A. B. Bud'ko et al., Phys. Fluids B 2, 1159 (1990)].« less

Time-resolved particle image velocimetry measurements of the 3D single-mode Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Xu, Qian; Krivets, Vitaliy V.; Sewell, Everest G.; Jacobs, Jeffrey W.

2016-11-01

A vertical shock tube is used to perform experiments on the single-mode three-dimensional Richtmyer-Meshkov Instability (RMI). The light gas (Air) and the heavy gas (SF6) enter from the top and the bottom of the shock tube driven section to form the interface. The initial perturbation is then generated by oscillating the gases vertically. Both gases are seeded with particles generated through vaporizing propylene glycol. An incident shock wave (M 1.2) impacts the interface to create an impulsive acceleration. The seeded particles are illuminated by a dual cavity 75W, Nd: YLF laser. Three high-speed CMOS cameras record time sequences of image pairs at a rate of 2 kHz. The initial perturbation used is that of a single, square-mode perturbation with either a single spike or a single bubble positioned at the center of the shock tube. The full time dependent velocity field is obtained allowing the determination of the circulation versus time. In addition, the evolution of time dependent amplitude is also determined. The results are compared with PIV measurements from previous two-dimensional single mode experiments along with PLIF measurements from previous three-dimensional single mode experiments.

Richtmyer-Meshkov instability of a sinusoidal interface driven by a cylindrical shock

NASA Astrophysics Data System (ADS)

Liu, L.; Ding, J.; Zhai, Z.; Luo, X.

2018-04-01

Evolution of a single-mode interface triggered by a cylindrically converging shock in a V-shaped geometry is investigated numerically using an adaptive multi-phase solver. Several physical mechanisms, including the Bell-Plesset (BP) effect, the Rayleigh-Taylor (RT) effect, the nonlinearity, and the compressibility are found to be pronounced in the converging environment. Generally, the BP and nonlinear effects play an important role at early stages, while the RT effect and the compressibility dominate the late-stage evolution. Four sinusoidal interfaces with different initial amplitudes (a_0 ) and wavelengths (λ ) are found to evolve differently in the converging geometry. For the very small a_0 /λ interfaces, nonlinearity is negligible at the early stages and the sole presence of the BP effect results in an increasing growth rate, confining the linear growth of the instability to a relatively small amount of time. For the moderately small a_0 /λ cases, the BP and nonlinear effects, which, respectively, promote and inhibit the perturbation development, coexist in the early stage. The counterbalancing effects between them produce a very long period of growth that is linear in time, even to a moment when the amplitude over wavelength ratio approaches 0.6. The RT stabilization effect at late stages due to the interface deceleration significantly inhibits the perturbation growth, which can be reasonably predicted by a modified Bell model.

Shock interaction with a two-gas interface in a novel dual-driver shock tube

NASA Astrophysics Data System (ADS)

Labenski, John R.

Fluid instabilities exist at the interface between two fluids having different densities if the flow velocity and density gradient are anti-parallel or if a shock wave crosses the boundary. The former case is called the Rayleigh-Taylor (R-T) instability and the latter, the Richtmyer-Meshkov (R-M) instability. Small initial perturbations on the interface destabilize and grow into larger amplitude structures leading to turbulent mixing. Instabilities of this type are seen in inertial confinement fusion (ICF) experiments, laser produced plasmas, supernova explosions, and detonations. A novel dual-driver shock tube was used to investigate the growth rate of the R-M instability. One driver is used to create an argon-refrigerant interface, and the other at the opposite end of the driven section generates a shock to force the interface with compressible flows behind the shock. The refrigerant gas in the first driver is seeded with sub-micron oil droplets for visualization of the interface. The interface travels down the driven section past the test section for a fixed amount of time. A stronger shock of Mach 1.1 to 1.3 drives the interface back past the test section where flow diagnostics are positioned. Two schlieren systems record the density fluctuations while light scattering detectors record the density of the refrigerant as a function of position over the interface. A pair of digital cameras take stereo images of the interface, as mapped out by the tracer particles under illumination by a Q-switched ruby laser. The amount of time that the interface is allowed to travel up the driven section determines the interaction time as a control. Comparisons made between the schlieren signals, light scattering detector outputs, and the images quantify the fingered characteristics of the interface and its growth due to shock forcing. The results show that the interface has a distribution of thickness and that the interaction with a shock further broadens the interface. The growth rate was found to exhibit a dependence on the shock strength.

The feed-out process: Rayleigh-Taylor and Richtmyer-Meshkov instabilities in thin, laser-driven foils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smitherman, D.P.

Eight beams carrying a shaped pulse from the NOVA laser were focused into a hohlraum with a total energy of about 25 kJ. A planar foil was placed on the side of the hohlraum with perturbations facing away from the hohlraum. All perturbations were 4 {micro}m in amplitude and 50 {micro}m in wavelength. Three foils of pure aluminum were shot with thicknesses and pulse lengths respectively of 86 {micro}m and 2. 2 ns, 50 {micro}m and 4.5 ns, and 35 {micro}m with both 2.2 ns and 4. 5 ns pulses. Two composite foils constructed respectively of 32 and 84 {micro}mmore » aluminum on the ablative side and 10 {micro}m beryllium on the cold surface were also shot using the 2.2 ns pulse. X-ray framing cameras recorded perturbation growth using both face- and side-on radiography. The LASNEX code was used to model the experiments. A shock wave interacted with the perturbation on the cold surface generating growth from a Richtmyer-Meshkov instability and a strong acoustic mode. The cold surface perturbation fed-out to the Rayleigh-Taylor unstable ablation surface, both by differential acceleration and interface coupling, where it grew. A density jump did not appear to have a large effect on feed-out from interface coupling. The Rayleigh-Taylor instability`s vortex pairs overtook and reversed the direction of flow of the Richtmyer-Meshkov vortices, resulting in the foil moving from a sinuous to a bubble and spike configuration. The Rayleigh-Taylor instability may have acted as an ablative instability on the hot surface, and as a classical instability on the cold surface, on which grew second and third order harmonics.« less

Rupture dynamics along bimaterial interfaces: a parametric study of the coupling between interfacial sliding and normal traction perturbation

NASA Astrophysics Data System (ADS)

Scala, Antonio; Festa, Gaetano; Vilotte, Jean-Pierre

2017-04-01

Earthquake ruptures often develop along faults separating materials with dissimilar elastic properties. Due to the broken symmetry, the propagation of the rupture along the bimaterial interface is driven by the coupling between interfacial sliding and normal traction perturbations. We numerically investigate in-plane rupture growth along a planar interface, under slip weakening friction, separating two dissimilar isotropic linearly elastic half-spaces. We perform a parametric study of the classical Prakash-Clifton regularisation for different material contrasts. In particular mesh-dependence and regularisation-dependence of the numerical solutions are analysed in this parameter space. When regularisation involves a slip-rate dependent relaxation time, a characteristic sliding distance is identified below which numerical solutions no longer depend on the regularisation parameter, i.e. they are consistent solutions of the same physical problem. Such regularisation provides an adaptive high-frequency filter of the slip-induced normal traction perturbations, following the dynamic shrinking of the dissipation zone during the acceleration phase. In contrast, regularisation involving a constant relaxation time leads to numerical solutions that always depend on the regularisation parameter since it fails adapting to the shrinking of the process zone. Dynamic regularisation is further investigated using a non-local regularisation based on a relaxation time that depends on the dynamic length of the dissipation zone. Such reformulation is shown to provide similar results as the dynamic time scale regularisation proposed by Prakash-Clifton when slip rate is replaced by the maximum slip rate along the sliding interface. This leads to the identification of a dissipative length scale associated with the coupling between interfacial sliding and normal traction perturbations, together with a scaling law between the maximum slip rate and the dynamic size of the process zone during the rupture propagation. Dynamic time scale regularisation is show to provide mesh-independent and physically well-posed numerical solutions during the acceleration phase toward an asymptotic speed. When generalised Rayleigh wave does not exist, numerical solutions are shown to tend toward an asymptotic velocity higher than the slowest shear wave speed. When generalised Rayleigh wave speed exists, as numerical solutions tend toward this velocity, increasing spurious oscillations develop and solutions become unstable. In this regime regularisation dependent and unstable finite-size pulses may be generated. This instability is associated with the singular behaviour of the slip-induced normal traction perturbations, and of the slip rate at the rupture front, in relation with complete shrinking of the dissipation zone. This phase requires to be modelled either by more complex interface constitutive laws involving velocity-strengthening effects that may stabilize short wavelength interfacial propagating modes or by considering non-ideal interfaces that introduce a new length scale in the problem that may promote selection and stabilization of the slip pulses.

Sink or Swim: Ions and Organics at the Ice-Air Interface.

PubMed

Hudait, Arpa; Allen, Michael T; Molinero, Valeria

2017-07-26

The ice-air interface is an important locus of environmental chemical reactions. The structure and dynamics of the ice surface impact the uptake of trace gases and kinetics of reactions in the atmosphere and snowpack. At tropospheric temperatures, the ice surface is partially premelted. Experiments indicate that ions increase the liquidity of the ice surface but hydrophilic organics do not. However, it is not yet known the extent of the perturbation solutes induce at the ice surface and what is the role of the disordered liquid-like layer in modulating the interaction between solutes and their mobility and aggregation at the ice surface. Here we use large-scale molecular simulations to investigate the effect of ions and glyoxal, one of the most abundant oxygenated volatile organic compounds in the atmosphere, on the structure, dynamics, and solvation properties of the ice surface. We find that the premelted surface of ice has unique solvation properties, different from those of liquid water. The increase in surface liquidity resulting from the hydration of ions leads to a water-mediated attraction of ions at the ice surface. Glyoxal molecules, on the other hand, perturb only slightly the surface of ice and do not experience water-driven attraction. They nonetheless accumulate as dry agglomerates at the ice surface, driven by direct interactions between the organic molecules. The enhanced attraction and clustering of ions and organics at the ice surface may play a significant role in modulating the mechanism and rate of heterogeneous chemical reactions occurring at the surface of atmospheric ice particles.

Numerical simulations of the process of multiple shock-flame interactions

NASA Astrophysics Data System (ADS)

Jiang, Hua; Dong, Gang; chen, Xiao; Wu, Jin-Tao

2016-08-01

Based on a weighted essentially nonoscillatory scheme, the multiple interactions of a flame interface with an incident shock wave and its reshock waves are numerically simulated by solving the compressible reactive Navier-Stokes equations with a single-step Arrhenius chemical reaction. The two-dimensional sinusoidally perturbed premixed flames with different initial perturbed amplitudes are used to investigate the effect of the initial perturbation on the flame evolutions. The results show that the development of the flame interface is directly affected by the initial perturbed amplitudes before the passages of reshock waves, and the perturbation development is mainly controlled by the Richtmyer-Meshkov instability (RMI). After the successive impacts of multiple reshock waves, the chemical reaction accelerates the consumption of reactants and leads to a gradual disappearance of the initial perturbed information. The perturbation developments in frozen flows with the same initial interface as those in reactive flows are also demonstrated. Comparisons of results between the reactive and frozen flows show that a chemical reaction changes the perturbation pattern of the flame interface by decreasing the density gradient, thereby weakening the baroclinic torque in the flame mixing region, and therefore plays a dominant role after the passage of reshock waves.

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

DOE PAGES

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; ...

2016-05-26

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. Here, we propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method usesmore » a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT "clean" and DT "mix" gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. Furthermore, we observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λ ii~T 2/Z 2ρ at the gas/shell interface. Finally, since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.« less

Using HT and DT gamma rays to diagnose mix in Omega capsule implosions

NASA Astrophysics Data System (ADS)

Schmitt, M. J.; Herrmann, H. W.; Kim, Y. H.; McEvoy, A. M.; Zylstra, A.; Hammel, B. A.; Sepke, S. M.; Leatherland, A.; Gales, S.

2016-05-01

Experimental evidence [1] indicates that shell material can be driven into the core of Omega capsule implosions on the same time scale as the initial convergent shock. It has been hypothesized that shock-generated temperatures at the fuel/shell interface in thin exploding pusher capsules diffusively drives shell material into the gas core between the time of shock passage and bang time. We propose a method to temporally resolve and observe the evolution of shell material into the capsule core as a function of fuel/shell interface temperature (which can be varied by varying the capsule shell thickness). Our proposed method uses a CD plastic capsule filled with 50/50 HT gas and diagnosed using gas Cherenkov detection (GCD) to temporally resolve both the HT “clean” and DT “mix” gamma ray burn histories. Simulations using Hydra [2] for an Omega CD-lined capsule with a sub-micron layer of the inside surface of the shell pre-mixed into a fraction of the gas region produce gamma reaction history profiles that are sensitive to the depth to which this material is mixed. An experiment to observe these differences as a function of capsule shell thickness is proposed to determine if interface mixing is consistent with thermal diffusion λii∼T2/Z2ρ at the gas/shell interface. Since hydrodynamic mixing from shell perturbations, such as the mounting stalk and glue, could complicate these types of capsule-averaged temporal measurements, simulations including their effects also have been performed showing minimal perturbation of the hot spot geometry.

A platform for studying the Rayleigh-Taylor and Richtmyer-Meshkov instabilities in a planar geometry at high energy density at the National Ignition Facility

NASA Astrophysics Data System (ADS)

Nagel, S. R.; Raman, K. S.; Huntington, C. M.; MacLaren, S. A.; Wang, P.; Barrios, M. A.; Baumann, T.; Bender, J. D.; Benedetti, L. R.; Doane, D. M.; Felker, S.; Fitzsimmons, P.; Flippo, K. A.; Holder, J. P.; Kaczala, D. N.; Perry, T. S.; Seugling, R. M.; Savage, L.; Zhou, Y.

2017-07-01

A new experimental platform has been developed at the National Ignition Facility (NIF) for studying the Rayleigh-Taylor (RT) and Richtmyer-Meshkov (RM) instabilities in a planar geometry at high-energy-densities. The platform uses 60 beams of the NIF laser to drive an initially solid shock tube containing a pre-machined interface between dense and light materials. The strong shock turns the initially solid target into a plasma and the material boundary into a fluid interface with the imprinted initial condition. The interface evolves by action of the RT and RM instabilities, and the growth is imaged with backlit x-ray radiography. We present our first data involving sinusoidal interface perturbations driven from the heavy side to the light side. Late-time radiographic images show the initial conditions reaching the deeply nonlinear regime, and an evolution of fine structure consistent with a transition to turbulence. We show preliminary comparisons with post-shot numerical simulations and discuss the implications for future campaigns.

Design of an interface to allow microfluidic electrophoresis chips to drink from the fire hose of the external environment.

PubMed

Attiya, S; Jemere, A B; Tang, T; Fitzpatrick, G; Seiler, K; Chiem, N; Harrison, D J

2001-01-01

An interface design is presented that facilitates automated sample introduction into an electrokinetic microchip, without perturbing the liquids within the microfluidic device. The design utilizes an interface flow channel with a volume flow resistance that is 0.54-4.1 x 10(6) times lower than the volume flow resistance of the electrokinetic fluid manifold used for mixing, reaction, separation, and analysis. A channel, 300 microm deep, 1 mm wide and 15-20 mm long, was etched in glass substrates to create the sample introduction channel (SIC) for a manifold of electrokinetic flow channels in the range of 10-13 microm depth and 36-275 microm width. Volume flow rates of up to 1 mL/min were pumped through the SIC without perturbing the solutions within the electrokinetic channel manifold. Calculations support this observation, suggesting a leakage flow to electroosmotic flow ratio of 0.1:1% in the electrokinetic channels, arising from 66-700 microL/min pressure-driven flow rates in the SIC. Peak heights for capillary electrophoresis separations in the electrokinetic flow manifold showed no dependence on whether the SIC pump was on or off. On-chip mixing, reaction and separation of anti-ovalbumin and ovalbumin could be performed with good quantitative results, independent of the SIC pump operation. Reproducibility of injection performance, estimated from peak height variations, ranged from 1.5-4%, depending upon the device design and the sample composition.

The stability of the contact interface of cylindrical and spherical shock tubes

NASA Astrophysics Data System (ADS)

Crittenden, Paul E.; Balachandar, S.

2018-06-01

The stability of the contact interface for radial shock tubes is investigated as a model for explosive dispersal. The advection upstream splitting method with velocity and pressure diffusion (AUSM+-up) is used to solve for the radial base flow. To investigate the stability of the resulting contact interface, perturbed governing equations are derived assuming harmonic modes in the transverse directions. The perturbed harmonic flow is solved by assuming an initial disturbance and using a perturbed version of AUSM+-up derived in this paper. The intensity of the perturbation near the contact interface is computed and compared to theoretical results obtained by others. Despite the simplifying assumptions of the theoretical analysis, very good agreement is observed. Not only can the magnitude of the instability be predicted during the initial expansion, but also remarkably the agreement between the numerical and theoretical results can be maintained through the collision between the secondary shock and the contact interface. Since the theoretical results only depend upon the time evolution of the base flow, the stability of various modes could be quickly investigated without explicitly solving a system of partial differential equations for the perturbed flow.

Small-Amplitude Richtmyer-Meshkov Instability at a Re-Shocked Material Interface

NASA Astrophysics Data System (ADS)

Velikovich, A. L.; Zalesak, S. T.; Metzler, N.; Aglitskiy, Y.

2008-11-01

We report an exact small-amplitude theory of the Richtmyer-Meshkov (RM) instability developing at a re-shocked material interface and favorably compare it to our simulations. The re-shock is seen to restart the classical RM instability growth from a larger initial amplitude, at a higher rate, and change its direction from heavy-to-light to light-to heavy and vice versa. Similarly, if a Rayleigh-Taylor (RT) unstable interface is strongly re-shocked from either the heavy or light fluid side, the fast RM growth is triggered. If a RT-unstable ablation front is re-shocked, it exhibits the ablative RM-instability, that is, low-frequency decaying oscillations [V. N. Goncharov, PRL 82, 2091 (1998); Y. Aglitskiy et al., PRL 87, 265001 (2001)]. This is predicted for colliding foil experiments on the Nike laser, where a RT-unstable ablation front is re-shocked by the strong shock wave produced in the collision of the laser-driven plastic foil with a stationary foam layer. The re-shock stops the acceleration and switches the perturbation evolution from the ablative RT to the ablative RM regime.

A comparative study of Rayleigh-Taylor and Richtmyer-Meshkov instabilities in 2D and 3D in tantalum

NASA Astrophysics Data System (ADS)

Sternberger, Z.; Maddox, B. R.; Opachich, Y. P.; Wehrenberg, C. E.; Kraus, R. G.; Remington, B. A.; Randall, G. C.; Farrell, M.; Ravichandran, G.

2017-01-01

Driving a shock wave through the interface between two materials with different densities can result in the Richtmyer-Meshkov or Rayleigh-Taylor instability and initial perturbations at the interface will grow. If the shock wave is sufficiently strong, the instability will lead to plastic flow at the interface. Material strength will reduce the amount of plastic flow and suppress growth. While such instabilities have been investigated in 2D, no studies of this phenomena have been performed in 3D on materials with strength. Initial perturbations to seed the hydrodynamic instability were coined into tantalum recovery targets. Two types of perturbations were used, two dimensional (2D) perturbations (hill and valley) and three-dimensional (3D) perturbations (egg crate pattern). The targets were subjected to dynamic loading using the Janus laser at the Jupiter Laser Facility. Shock pressures ranged from 50 GPa up to 150 GPa and were calibrated using VISAR drive targets.

Experimental Studies of the Interaction Between a Parallel Shear Flow and a Directionally-Solidifying Front

NASA Technical Reports Server (NTRS)

Zhang, Meng; Maxworthy, Tony

1999-01-01

It has long been recognized that flow in the melt can have a profound influence on the dynamics of a solidifying interface and hence the quality of the solid material. In particular, flow affects the heat and mass transfer, and causes spatial and temporal variations in the flow and melt composition. This results in a crystal with nonuniform physical properties. Flow can be generated by buoyancy, expansion or contraction upon phase change, and thermo-soluto capillary effects. In general, these flows can not be avoided and can have an adverse effect on the stability of the crystal structures. This motivates crystal growth experiments in a microgravity environment, where buoyancy-driven convection is significantly suppressed. However, transient accelerations (g-jitter) caused by the acceleration of the spacecraft can affect the melt, while convection generated from the effects other than buoyancy remain important. Rather than bemoan the presence of convection as a source of interfacial instability, Hurle in the 1960s suggested that flow in the melt, either forced or natural convection, might be used to stabilize the interface. Delves considered the imposition of both a parabolic velocity profile and a Blasius boundary layer flow over the interface. He concluded that fast stirring could stabilize the interface to perturbations whose wave vector is in the direction of the fluid velocity. Forth and Wheeler considered the effect of the asymptotic suction boundary layer profile. They showed that the effect of the shear flow was to generate travelling waves parallel to the flow with a speed proportional to the Reynolds number. There have been few quantitative, experimental works reporting on the coupling effect of fluid flow and morphological instabilities. Huang studied plane Couette flow over cells and dendrites. It was found that this flow could greatly enhance the planar stability and even induce the cell-planar transition. A rotating impeller was buried inside the sample cell, driven by an outside rotating magnet, in order to generate the flow. However, it appears that this was not a well-controlled flow and may also have been unsteady. In the present experimental study, we want to study how a forced parallel shear flow in a Hele-Shaw cell interacts with the directionally solidifying crystal interface. The comparison of experimental data show that the parallel shear flow in a Hele-Shaw cell has a strong stabilizing effect on the planar interface by damping the existing initial perturbations. The flow also shows a stabilizing effect on the cellular interface by slightly reducing the exponential growth rate of cells. The left-right symmetry of cells is broken by the flow with cells tilting toward the incoming flow direction. The tilting angle increases with the velocity ratio. The experimental results are explained through the parallel flow effect on lateral solute transport. The phenomenon of cells tilting against the flow is consistent with the numerical result of Dantzig and Chao.

Supersonic shear flows in laser driven high-energy-density plasmas created by the Nike laser

NASA Astrophysics Data System (ADS)

Harding, E. C.; Drake, R. P.; Gillespie, R. S.; Grosskopf, M. J.; Ditmar, J. R.; Aglitskiy, Y.; Weaver, J. L.; Velikovich, A. L.; Plewa, T.

2008-11-01

In high-energy-density (HED) plasmas the Kelvin-Helmholtz (KH) instability plays an important role in the evolution of Rayleigh-Taylor (RT) and Richtmyer-Meshkov (RM) unstable interfaces, as well as material interfaces that experience the passage one or multiple oblique shocks. Despite the potentially important role of the KH instability few experiments have been carried out to explore its behavior in the high-energy-density regime. We report on the evolution of a supersonic shear flow that is generated by the release of a high velocity (>100 km/s) aluminum plasma onto a CRF foam (ρ = 0.1 g/cc) surface. In order to seed the Kelvin-Helmholtz (KH) instability various two-dimensional sinusoidal perturbations (λ = 100, 200, and 300 μm with peak-to-valley amplitudes of 10, 20, and 30 μm respectively) have been machined into the foam surface. This experiment was performed using the Nike laser at the Naval Research Laboratory.

Progress Toward Kelvin-Helmholtz instabilities in a High-Energy-Density Plasma on the Nike Laser

NASA Astrophysics Data System (ADS)

Harding, E. C.; Drake, R. P.; Aglitskiy, Y.; Dwarkadas, V. V.; Gillespie, R. S.; Grosskopf, M. J.; Huntington, C. M.; Gjeci, N.; Campbell, D. A.; Marion, D. C.

2007-11-01

In the realm of high-energy-density (HED) plasmas, there exist three primary hydrodynamic instabilities: Rayleigh-Taylor (RT), Richtmyer-Meshkov (RM), and Kelvin-Helmholtz (KH). Although the RT and the RM instabilities have been observed in the laboratory, no experiment to our knowledge has cleanly diagnosed the KH instability. While the RT instability results from the acceleration of a more dense fluid into a less dense fluid and the RM instability is due to shock deposited vorticity onto an interface, the KH instability is driven by a lifting force generated by velocity shear at a perturbed fluid interface. Understanding the KH instability mechanism in HED plasmas will provide essential insight into detailed RT-spike development, mass stripping, many astrophysical processes, as well as laying the groundwork for future transition to turbulence experiments. We present 2D simulations and data from our initial attempts to create a pure KH system using the Nike laser at the Naval Research Laboratory.

Self-assembly of pi-conjugated peptides in aqueous environments leading to energy-transporting bioelectronic nanostructures

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tavor, John

The realization of new supramolecular pi-conjugated organic structures inspired and driven by peptide-based self-assembly will offer a new approach to interface with the biotic environment in a way that will help to meet many DOE-recognized grand challenges. Previously, we developed pi-conjugated peptides that undergo supramolecular self-assembly into one-dimensional (1-D) organic electronic nanomaterials under benign aqueous conditions. The intermolecular interactions among the pi-conjugated organic segments within these nanomaterials lead to defined perturbations of their optoelectronic properties and yield nanoscale conduits that support energy transport within individual nanostructures and throughout bulk macroscopic collections of nanomaterials. Our objectives for future research are tomore » construct and study biomimetic electronic materials for energy-related technology optimized for harsher non-biological environments where peptide-driven self-assembly enhances pi-stacking within nanostructured biomaterials, as detailed in the following specific tasks: (1) synthesis and detailed optoelectronic characterization of new pi-electron units to embed within homogeneous self assembling peptides, (2) molecular and data-driven modeling of the nanomaterial aggregates and their higher-order assemblies, and (3) development of new hierarchical assembly paradigms to organize multiple electronic subunits within the nanomaterials leading to heterogeneous electronic properties (i.e. gradients and localized electric fields). These intertwined research tasks will lead to the continued development and fundamental mechanistic understanding of a powerful bioinspired materials set capable of making connections between nanoscale electronic materials and macroscopic bulk interfaces, be they those of a cell, a protein or a device.« less

Drop interaction with solid boundaries in liquid/liquid systems

NASA Astrophysics Data System (ADS)

Bordoloi, Ankur Deep

The present experimental work was motivated primarily by the CO 2 sequestration process. In a possible scenario during this process, gravity driven CO2 bubbles coalesce at an interface near the rock surface. In another scenario, trapped CO2 fluid may escape from a porous matrix overcoming interfacial force inside a pore. Based on these potential scenarios, the current research was divided into two broad experimental studies. In the first part, coalescence at a quiescent interface of two analogous fluids (silicone oil and water/glycerin mixture) was investigated for water/glycerin drops with Bond number (Bo) ~7 and Ohnesorge number ~ 0.01 using high-speed imaging and time-resolved tomographic PIV. Two perturbation cases with a solid particle wetted in oil and water/glycerin placed adjacent to the coalescing drop were considered. The results were compared with coalescence of a single drop and that of a drop neighBored by a second drop of equivalent size. Each perturbing object caused an initial tilting of the drop, influencing its rupture location, subsequent film retraction and eventual collapse behavior. Once tilted, drops typically ruptured near their lowest vertical position which was located either toward or away from the perturbing object depending on the case. The trends in local retraction speed of the ruptured film and the overall dynamics of the collapsing drops were discussed in detail. In the second part, the motion of gravity driven drops (B o~0.8-11) through a confining orifice d/D<1) was studied using high speed imaging and planar PIV. Drops of water/glycerin, surrounded by silicone oil, fall toward and encounter the orifice plate after reaching terminal speed. The effects of surface wettability were investigated for Both round-edged and sharp-edged orifices. For the round-edged case, a thin film of surrounding oil prevented the drop fluid from contacting the orifice surface, such that the flow outcomes of the drops were independent of surface wettability. For d/D<0.8, the Boundary between drop capture and release depended on a modified Bond number relating drop gravitational time scale to orifice surface tension time scale. For the sharp-edged case, contact was initiated at the orifice edge immediately upon impact, such that surface wettability influenced the drop outcome.

Study of Dose Perturbation at Bone-Tissue Interfaces in Megavoltage Photon Beam Therapy.

NASA Astrophysics Data System (ADS)

Das, Indra Jeet

Dose perturbations during photon beam irradiation occur at interfaces between two dissimilar media due to the loss of electronic equilibrium. The human body contains many different types of interfaces between soft tissue and other media such as, air cavities, lungs, bones, and high atomic number (Z) materials. The dose to critical organs in the vicinity of high Z interfaces, is what leads to this project. This work describes the dose perturbation at high Z (from bone to lead) interfaces with soft tissue for clinically used megavoltage photon beams in the range of CO-60 gamma rays to 24 MV X-rays. It is divided into three main sections: (1) the dose outside the inhomogeneity in the direction of backscatter, (2) the dose inside the inhomogeneity, and (3) the dose on the photon transmission side of the inhomogeneity. Using different types of parallel plate ion chambers, TLD (powder and chip), and film as dosimeters, the dose perturbation is studied as a function of photon energy, thickness, width, and depth of inhomogeneity, distance from the interface and radiation field size. The concept of Bragg-Gray cavity theory is applied and verified for dose determination inside the inhomogeneity. A significant dose enhancement has been observed on the backscatter side for all photon energies. It is strongly dependent on the atomic number of the inhomogeneity and less dependent on the photon energy, thickness, depth, width, and field size. In the forward direction, a dose reduction occurs at the interface at beam energies lower than 10 MV, whereas a dose enhancement occurs for higher photon energies. The interface effect persists up to a few millimeters on the backscatter side but a distance equivalent to the secondary electron range for the particular photon beams in the forward direction. The dose perturbation is explained on the basis of production and transport of secondary electrons. Empirical functions are derived from the experimental data to predict the dose distribution in the vicinity of an inhomogeneity. These equations could form the basis of a treatment planning system that would accurately represent the dose both at the interface and surrounding tissue.

Chemical and biological sensing using liquid crystals

PubMed Central

Carlton, Rebecca J.; Hunter, Jacob T.; Miller, Daniel S.; Abbasi, Reza; Mushenheim, Peter C.; Tan, Lie Na; Abbott, Nicholas L.

2014-01-01

The liquid crystalline state of matter arises from orientation-dependent, non-covalent interaction between molecules within condensed phases. Because the balance of intermolecular forces that underlies formation of liquid crystals is delicate, this state of matter can, in general, be easily perturbed by external stimuli (such as an electric field in a display). In this review, we present an overview of recent efforts that have focused on exploiting the responsiveness of liquid crystals as the basis of chemical and biological sensors. In this application of liquid crystals, the challenge is to design liquid crystalline systems that undergo changes in organization when perturbed by targeted chemical and biological species of interest. The approaches described below revolve around the design of interfaces that selectively bind targeted species, thus leading to surface-driven changes in the organization of the liquid crystals. Because liquid crystals possess anisotropic optical and dielectric properties, a range of different methods can be used to read out the changes in organization of liquid crystals that are caused by targeted chemical and biological species. This review focuses on principles for liquid crystal-based sensors that provide an optical output. PMID:24795857

Nonmonotonicity of the Frictional Bimaterial Effect

NASA Astrophysics Data System (ADS)

Aldam, Michael; Xu, Shiqing; Brener, Efim A.; Ben-Zion, Yehuda; Bouchbinder, Eran

2017-10-01

Sliding along frictional interfaces separating dissimilar elastic materials is qualitatively different from sliding along interfaces separating identical materials due to the existence of an elastodynamic coupling between interfacial slip and normal stress perturbations in the former case. This bimaterial coupling has important implications for the dynamics of frictional interfaces, including their stability and rupture propagation along them. We show that while this bimaterial coupling is a monotonically increasing function of the bimaterial contrast, when it is coupled to interfacial shear stress perturbations through a friction law, various physical quantities exhibit a nonmonotonic dependence on the bimaterial contrast. In particular, we show that for a regularized Coulomb friction, the maximal growth rate of unstable interfacial perturbations of homogeneous sliding is a nonmonotonic function of the bimaterial contrast and provides analytic insight into the origin of this nonmonotonicity. We further show that for velocity-strengthening rate-and-state friction, the maximal growth rate of unstable interfacial perturbations of homogeneous sliding is also a nonmonotonic function of the bimaterial contrast. Results from simulations of dynamic rupture along a bimaterial interface with slip-weakening friction provide evidence that the theoretically predicted nonmonotonicity persists in nonsteady, transient frictional dynamics.

Perturbatively deformed defects in Pöschl-Teller-driven scenarios for quantum mechanics

NASA Astrophysics Data System (ADS)

Bernardini, Alex E.; da Rocha, Roldão

2016-07-01

Pöschl-Teller-driven solutions for quantum mechanical fluctuations are triggered off by single scalar field theories obtained through a systematic perturbative procedure for generating deformed defects. The analytical properties concerning the quantum fluctuations in one-dimension, zero-mode states, first- and second-excited states, and energy density profiles are all obtained from deformed topological and non-topological structures supported by real scalar fields. Results are firstly derived from an integrated λϕ4 theory, with corresponding generalizations applied to starting λχ4 and sine-Gordon theories. By focusing our calculations on structures supported by the λϕ4 theory, the outcome of our study suggests an exact quantitative correspondence to Pöschl-Teller-driven systems. Embedded into the perturbative quantum mechanics framework, such a correspondence turns into a helpful tool for computing excited states and continuous mode solutions, as well as their associated energy spectrum, for quantum fluctuations of perturbatively deformed structures. Perturbative deformations create distinct physical scenarios in the context of exactly solvable quantum systems and may also work as an analytical support for describing novel braneworld universes embedded into a 5-dimensional gravity bulk.

Interface width effect on the classical Rayleigh-Taylor instability in the weakly nonlinear regime

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, L. F.; State Key Laboratory for Geomechanics and Deep Underground Engineering, China University of Mining and Technology, Beijing 100083; Ye, W. H.

2010-05-15

In this paper, the interface width effects (i.e., the density gradient effects or the density transition layer effects) on the Rayleigh-Taylor instability (RTI) in the weakly nonlinear (WN) regime are investigated by numerical simulation (NS). It is found that the interface width effects dramatically influence the linear growth rate in the linear growth regime and the mode coupling process in the WN growth regime. First, the interface width effects decrease the linear growth rate of the RTI, particularly for the short perturbation wavelengths. Second, the interface width effects suppress (reduce) the third-order feedback to the fundamental mode, which induces themore » nonlinear saturation amplitude (NSA) to exceed the classical prediction, 0.1lambda. The wider the density transition layer is, the larger the NSA is. The NSA in our NS can reach a half of its perturbation wavelength. Finally, the interface width effects suppress the generation and the growth of the second and the third harmonics. The ability to suppress the harmonics' growth increases with the interface width but decreases with the perturbation wavelength. On the whole, in the WN regime, the interface width effects stabilize the RTI, except for an enhancement of the NSA, which is expected to improve the understanding of the formation mechanism for the astrophysical jets, and for the jetlike long spikes in the high energy density physics.« less

XPI: The Xanadu Parameter Interface

NASA Technical Reports Server (NTRS)

White, N.; Barrett, P.; Oneel, B.; Jacobs, P.

1992-01-01

XPI is a table driven parameter interface which greatly simplifies both command driven programs such as BROWSE and XIMAGE as well as stand alone single-task programs. It moves all of the syntax and semantic parsing of commands and parameters out of the users code into common code and externally defined tables. This allows the programmer to concentrate on writing the code unique to the application rather than reinventing the user interface and for external graphical interfaces to interface with no changes to the command driven program. XPI also includes a compatibility library which allows programs written using the IRAF host interface (Mandel and Roll) to use XPI in place of the IRAF host interface.

MHD Wave Propagation at the Interface Between Solar Chromosphere and Corona

NASA Astrophysics Data System (ADS)

Huang, Y.; Song, P.; Vasyliunas, V. M.

2017-12-01

We study the electromagnetic and momentum constraints at the solar transition region which is a sharp layer interfacing between the solar chromosphere and corona. When mass transfer between the two domains is neglected, the transition region can be treated as a contact discontinuity across which the magnetic flux is conserved and the total forces are balanced. We consider an Alfvénic perturbation that propagates along the magnetic field incident onto the interface from one side. In order to satisfy the boundary conditions at the transition region, only part of the incident energy flux is transmitted through and the rest is reflected. Taking into account the highly anisotropic propagation of waves in magnetized plasmas, we generalize the law of reflection and specify Snell's law for each of the three wave MHD modes: incompressible Alfvén mode and compressible fast and slow modes. Unlike conventional optical systems, the interface between two magnetized plasmas is not rigid but can be deformed by the waves, allowing momentum and energy to be transferred by compression. With compressible modes included, the Fresnel conditions need substantial modification. We derive Fresnel conditions, reflectivities and transmittances, and mode conversion for incident waves propagating along the background magnetic field. The results are well organized when the incident perturbation is decomposed into components in and normal to the incident plane (containing the background magnetic field and the normal direction of the interface). For a perturbation normal to the incident plane, both transmitted and reflected perturbations are incompressible Alfvén mode waves. For a perturbation in the incident plane, they can be compressible slow and fast mode waves which may produce ripples on the transition region.

Optimization of Monte Carlo dose calculations: The interface problem

NASA Astrophysics Data System (ADS)

Soudentas, Edward

1998-05-01

High energy photon beams are widely used for radiation treatment of deep-seated tumors. The human body contains many types of interfaces between dissimilar materials that affect dose distribution in radiation therapy. Experimentally, significant radiation dose perturbations has been observed at such interfaces. The EGS4 Monte Carlo code was used to calculate dose perturbations at boundaries between dissimilar materials (such as bone/water) for 60Co and 6 MeV linear accelerator beams using a UNIX workstation. A simple test of the reliability of a random number generator was also developed. A systematic study of the adjustable parameters in EGS4 was performed in order to minimize calculational artifacts at boundaries. Calculations of dose perturbations at boundaries between different materials showed that there is a 12% increase in dose at water/bone interface, and a 44% increase in dose at water/copper interface. with the increase mainly due to electrons produced in water and backscattered from the high atomic number material. The dependence of the dose increase on the atomic number was also investigated. The clinically important case of using two parallel opposed beams for radiation therapy was investigated where increased doses at boundaries has been observed. The Monte Carlo calculations can provide accurate dosimetry data under conditions of electronic non-equilibrium at tissue interfaces.

Effect of Schmidt number on mass transfer across a sheared gas-liquid interface in a wind-driven turbulence.

PubMed

Takagaki, Naohisa; Kurose, Ryoichi; Kimura, Atsushi; Komori, Satoru

2016-11-14

The mass transfer across a sheared gas-liquid interface strongly depends on the Schmidt number. Here we investigate the relationship between mass transfer coefficient on the liquid side, k L , and Schmidt number, Sc, in the wide range of 0.7 ≤ Sc ≤ 1000. We apply a three-dimensional semi direct numerical simulation (SEMI-DNS), in which the mass transfer is solved based on an approximated deconvolution model (ADM) scheme, to wind-driven turbulence with mass transfer across a sheared wind-driven wavy gas-liquid interface. In order to capture the deforming gas-liquid interface, an arbitrary Lagrangian-Eulerian (ALE) method is employed. Our results show that similar to the case for flat gas-liquid interfaces, k L for the wind-driven wavy gas-liquid interface is generally proportional to Sc -0.5 , and can be roughly estimated by the surface divergence model. This trend is endorsed by the fact that the mass transfer across the gas-liquid interface is controlled mainly by streamwise vortices on the liquid side even for the wind-driven turbulence under the conditions of low wind velocities without wave breaking.

Effect of Schmidt number on mass transfer across a sheared gas-liquid interface in a wind-driven turbulence

PubMed Central

Takagaki, Naohisa; Kurose, Ryoichi; Kimura, Atsushi; Komori, Satoru

2016-01-01

The mass transfer across a sheared gas-liquid interface strongly depends on the Schmidt number. Here we investigate the relationship between mass transfer coefficient on the liquid side, kL, and Schmidt number, Sc, in the wide range of 0.7 ≤ Sc ≤ 1000. We apply a three-dimensional semi direct numerical simulation (SEMI-DNS), in which the mass transfer is solved based on an approximated deconvolution model (ADM) scheme, to wind-driven turbulence with mass transfer across a sheared wind-driven wavy gas-liquid interface. In order to capture the deforming gas-liquid interface, an arbitrary Lagrangian-Eulerian (ALE) method is employed. Our results show that similar to the case for flat gas-liquid interfaces, kL for the wind-driven wavy gas-liquid interface is generally proportional to Sc−0.5, and can be roughly estimated by the surface divergence model. This trend is endorsed by the fact that the mass transfer across the gas-liquid interface is controlled mainly by streamwise vortices on the liquid side even for the wind-driven turbulence under the conditions of low wind velocities without wave breaking. PMID:27841325

Protein-Protein Interface Predictions by Data-Driven Methods: A Review

PubMed Central

Xue, Li C; Dobbs, Drena; Bonvin, Alexandre M.J.J.; Honavar, Vasant

2015-01-01

Reliably pinpointing which specific amino acid residues form the interface(s) between a protein and its binding partner(s) is critical for understanding the structural and physicochemical determinants of protein recognition and binding affinity, and has wide applications in modeling and validating protein interactions predicted by high-throughput methods, in engineering proteins, and in prioritizing drug targets. Here, we review the basic concepts, principles and recent advances in computational approaches to the analysis and prediction of protein-protein interfaces. We point out caveats for objectively evaluating interface predictors, and discuss various applications of data-driven interface predictors for improving energy model-driven protein-protein docking. Finally, we stress the importance of exploiting binding partner information in reliably predicting interfaces and highlight recent advances in this emerging direction. PMID:26460190

Further Experimental Investigations of the Richtmyer-Meshkov Instability

NASA Astrophysics Data System (ADS)

Miller, P. L.; Peyser, T. A.; Stry, P. E.; Logory, L. M.; Farley, D. R.

1996-11-01

We report on further experimental investigations of the Richtmyer-Meshkov instability from an initially nonlinear perturbation, conducted on the Nova laser. The experiments use a Nova hohlraum as a driver source for a strong shock in a miniature shock tube attached to the hohlraum. The shock tube contains brominated plastic and low-density carbon foam as the two working fluids, with a micro-machined sawtooth interface between them serving as the perturbation. The shock, upon crossing the interface, instigates the Richtmyer-Meshkov instability from the perturbation. The resulting growth of the mixing layer is diagnosed radiographically. We have previously reported upon a results from a single wavelength and amplitude of perturbation (T. A. Peyser et al., Phys. Rev. Lett.) 75, 2332 (1996).. A study of the effect of variations in amplitude and wavelength on the nonlinear growth of the instability will be discussed.

Study of the Reynolds Number Effect on the Process of Instability Transition Into the Turbulent Stage.

PubMed

Nevmerzhitskiy, N V; Sotskov, E A; Sen'kovskiy, E D; Krivonos, O L; Polovnikov, A A; Levkina, E V; Frolov, S V; Abakumov, S A; Marmyshev, V V

2014-09-01

The results of the experimental study of the Reynolds number effect on the process of the Rayleigh-Taylor (R-T) instability transition into the turbulent stage are presented. The experimental liquid layer was accelerated by compressed gas. Solid particles were scattered on the layer free surface to specify the initial perturbations in some experiments. The process was recorded with the use of a high-speed motion picture camera. The following results were obtained in experiments: (1) Long-wave perturbation is developed at the interface at the Reynolds numbers Re < 10 4 . If such perturbation growth is limited by a hard wall, the jet directed in gas is developed. If there is no such limitation, this perturbation is resolved into the short-wave ones with time, and their growth results in gas-liquid mixing. (2) Short-wave perturbations specified at the interface significantly reduce the Reynolds number Re for instability to pass into the turbulent mixing stage.

Manipulation of three-dimensional Richtmyer-Meshkov instability by initial interfacial principal curvatures

NASA Astrophysics Data System (ADS)

Guan, Ben; Zhai, Zhigang; Si, Ting; Lu, Xiyun; Luo, Xisheng

2017-03-01

The characteristics of three-dimensional (3D) Richtmyer-Meshkov instability (RMI) in the early stages are studied numerically. By designing 3D interfaces that initially possess various identical and opposite principal curvature combinations, the growth rate of perturbations can be effectively manipulated. The weighted essentially nonoscillatory scheme and the level set method combined with the real ghost fluid method are used to simulate the flow. The results indicate that the interface development and the shock propagation in 3D cases are much more complicated than those in 2D case, and the evolution of 3D interfaces is heavily dependent on the initial interfacial principal curvatures. The 3D structure of wave patterns induces high pressure zones in the flow field, and the pressure oscillations change the local instabilities of interfaces. In the linear stages, the perturbation growth rate follows regularity as the interfacial principal curvatures vary, which is further predicted by the stability theory of 2D and 3D interfaces. It is also found that hysteresis effects exist at the onset of the linear stages in the 3D case for the same initial perturbations as the 2D case, resulting in different evolutions of 3D RMI in the nonlinear stages.

The predictability of frequency-altered auditory feedback changes the weighting of feedback and feedforward input for speech motor control.

PubMed

Scheerer, Nichole E; Jones, Jeffery A

2014-12-01

Speech production requires the combined effort of a feedback control system driven by sensory feedback, and a feedforward control system driven by internal models. However, the factors that dictate the relative weighting of these feedback and feedforward control systems are unclear. In this event-related potential (ERP) study, participants produced vocalisations while being exposed to blocks of frequency-altered feedback (FAF) perturbations that were either predictable in magnitude (consistently either 50 or 100 cents) or unpredictable in magnitude (50- and 100-cent perturbations varying randomly within each vocalisation). Vocal and P1-N1-P2 ERP responses revealed decreases in the magnitude and trial-to-trial variability of vocal responses, smaller N1 amplitudes, and shorter vocal, P1 and N1 response latencies following predictable FAF perturbation magnitudes. In addition, vocal response magnitudes correlated with N1 amplitudes, vocal response latencies, and P2 latencies. This pattern of results suggests that after repeated exposure to predictable FAF perturbations, the contribution of the feedforward control system increases. Examination of the presentation order of the FAF perturbations revealed smaller compensatory responses, smaller P1 and P2 amplitudes, and shorter N1 latencies when the block of predictable 100-cent perturbations occurred prior to the block of predictable 50-cent perturbations. These results suggest that exposure to large perturbations modulates responses to subsequent perturbations of equal or smaller size. Similarly, exposure to a 100-cent perturbation prior to a 50-cent perturbation within a vocalisation decreased the magnitude of vocal and N1 responses, but increased P1 and P2 latencies. Thus, exposure to a single perturbation can affect responses to subsequent perturbations. © 2014 Federation of European Neuroscience Societies and John Wiley & Sons Ltd.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, L. F., E-mail: wang-lifeng@iapcm.ac.cn; Ye, W. H.; Liu, Jie

In this research, a weakly nonlinear (WN) model has been developed considering the growth of a small perturbation on a cylindrical interface between two incompressible fluids which is subject to arbitrary radial motion. We derive evolution equations for the perturbation amplitude up to third order, which can depict the linear growth of the fundamental mode, the generation of the second and third harmonics, and the third-order (second-order) feedback to the fundamental mode (zero-order). WN solutions are obtained for a special uniformly convergent case. WN analyses are performed to address the dependence of interface profiles, amplitudes of inward-going and outward-going parts,more » and saturation amplitudes of linear growth of the fundamental mode on the Atwood number, the mode number (m), and the initial perturbation. The difference of WN evolution in cylindrical geometry from that in planar geometry is discussed in some detail. It is shown that interface profiles are determined mainly by the inward and outward motions rather than bubbles and spikes. The amplitudes of inward-going and outward-going parts are strongly dependent on the Atwood number and the initial perturbation. For low-mode perturbations, the linear growth of fundamental mode cannot be saturated by the third-order feedback. For fixed Atwood numbers and initial perturbations, the linear growth of fundamental mode can be saturated with increasing m. The saturation amplitude of linear growth of the fundamental mode is typically 0.2λ–0.6λ for m < 100, with λ being the perturbation wavelength. Thus, it should be included in applications where Bell-Plesset [G. I. Bell, Los Alamos Scientific Laboratory Report No. LA-1321, 1951; M. S. Plesset, J. Appl. Phys. 25, 96 (1954)] converging geometry effects play a pivotal role, such as inertial confinement fusion implosions.« less

Monte Carlo Perturbation Theory Estimates of Sensitivities to System Dimensions

DOE PAGES

Burke, Timothy P.; Kiedrowski, Brian C.

2017-12-11

Here, Monte Carlo methods are developed using adjoint-based perturbation theory and the differential operator method to compute the sensitivities of the k-eigenvalue, linear functions of the flux (reaction rates), and bilinear functions of the forward and adjoint flux (kinetics parameters) to system dimensions for uniform expansions or contractions. The calculation of sensitivities to system dimensions requires computing scattering and fission sources at material interfaces using collisions occurring at the interface—which is a set of events with infinitesimal probability. Kernel density estimators are used to estimate the source at interfaces using collisions occurring near the interface. The methods for computing sensitivitiesmore » of linear and bilinear ratios are derived using the differential operator method and adjoint-based perturbation theory and are shown to be equivalent to methods previously developed using a collision history–based approach. The methods for determining sensitivities to system dimensions are tested on a series of fast, intermediate, and thermal critical benchmarks as well as a pressurized water reactor benchmark problem with iterated fission probability used for adjoint-weighting. The estimators are shown to agree within 5% and 3σ of reference solutions obtained using direct perturbations with central differences for the majority of test problems.« less

Perturbation Theory for Scattering from Multilayers with Randomly Rough Fractal Interfaces: Remote Sensing Applications.

PubMed

Imperatore, Pasquale; Iodice, Antonio; Riccio, Daniele

2017-12-27

A general, approximate perturbation method, able to provide closed-form expressions of scattering from a layered structure with an arbitrary number of rough interfaces, has been recently developed. Such a method provides a unique tool for the characterization of radar response patterns of natural rough multilayers. In order to show that, here, for the first time in a journal paper, we describe the application of the developed perturbation theory to fractal interfaces; we then employ the perturbative method solution to analyze the scattering from real-world layered structures of practical interest in remote sensing applications. We focus on the dependence of normalized radar cross section on geometrical and physical properties of the considered scenarios, and we choose two classes of natural stratifications: wet paleosoil covered by a low-loss dry sand layer and a sea-ice layer above water with dry snow cover. Results are in accordance with the experimental evidence available in the literature for the low-loss dry sand layer, and they may provide useful indications about the actual ability of remote sensing instruments to perform sub-surface sensing for different sensor and scene parameters.

Perturbation Theory for Scattering from Multilayers with Randomly Rough Fractal Interfaces: Remote Sensing Applications

PubMed Central

2017-01-01

A general, approximate perturbation method, able to provide closed-form expressions of scattering from a layered structure with an arbitrary number of rough interfaces, has been recently developed. Such a method provides a unique tool for the characterization of radar response patterns of natural rough multilayers. In order to show that, here, for the first time in a journal paper, we describe the application of the developed perturbation theory to fractal interfaces; we then employ the perturbative method solution to analyze the scattering from real-world layered structures of practical interest in remote sensing applications. We focus on the dependence of normalized radar cross section on geometrical and physical properties of the considered scenarios, and we choose two classes of natural stratifications: wet paleosoil covered by a low-loss dry sand layer and a sea-ice layer above water with dry snow cover. Results are in accordance with the experimental evidence available in the literature for the low-loss dry sand layer, and they may provide useful indications about the actual ability of remote sensing instruments to perform sub-surface sensing for different sensor and scene parameters. PMID:29280979

Thin layer model for nonlinear evolution of the Rayleigh-Taylor instability

NASA Astrophysics Data System (ADS)

Zhao, K. G.; Wang, L. F.; Xue, C.; Ye, W. H.; Wu, J. F.; Ding, Y. K.; Zhang, W. Y.

2018-03-01

On the basis of the thin layer approximation [Ott, Phys. Rev. Lett. 29, 1429 (1972)], a revised thin layer model for incompressible Rayleigh-Taylor instability has been developed to describe the deformation and nonlinear evolution of the perturbed interface. The differential equations for motion are obtained by analyzing the forces (the gravity and pressure difference) of fluid elements (i.e., Newton's second law). The positions of the perturbed interface are obtained from the numerical solution of the motion equations. For the case of vacuum on both sides of the layer, the positions of the upper and lower interfaces obtained from the revised thin layer approximation agree with that from the weakly nonlinear (WN) model of a finite-thickness fluid layer [Wang et al., Phys. Plasmas 21, 122710 (2014)]. For the case considering the fluids on both sides of the layer, the bubble-spike amplitude from the revised thin layer model agrees with that from the WN model [Wang et al., Phys. Plasmas 17, 052305 (2010)] and the expanded Layzer's theory [Goncharov, Phys. Rev. Lett. 88, 134502 (2002)] in the early nonlinear growth regime. Note that the revised thin layer model can be applied to investigate the perturbation growth at arbitrary Atwood numbers. In addition, the large deformation (the large perturbed amplitude and the arbitrary perturbed distributions) in the initial stage can also be described by the present model.

Instability Coupling Experiments*

NASA Astrophysics Data System (ADS)

Chrien, R. E.; Hoffman, N. M.; Magelssen, G. R.; Schappert, G. T.; Smitherman, D. P.

1996-11-01

The coupling of Richtmyer-Meshkov (RM) and ablative Rayleigh-Taylor (ART) instabilities is being studied with indirectly-driven planar foil experiments on the Nova laser at Livermore. The foil is attached to a 1.6-mm-diameter, 2.75-mm-long Au hohlraum driven by a 2.2-ns long, 1:5-contrast-ratio shaped laser pulse. A shock is generated in 35-μm or 86-μm thick Al foils with a 50-μm-wavelength, 4-μm-amplitude sinusoidal perturbation on its rear surface. In some experiments, the perturbation is applied to a 10-μm Be layer on the Al. A RM instability develops when the shock encounters the perturbed surface. The flow field of the RM instability can ``feed out'' to the ablation surface of the foil and provide the seed for ART perturbation growth. Face-on and side-on x-radiography are used to observe areal density perturbations in the foil. For the 86-μm foil, the perturbation arrives at the ablation surface while the hohlraum drive is dropping and the data are consistent with RM instability alone. For the 35-μm foil, the perturbation feeds out while the hohlraum drive is close to its peak and the data appear to show strong ART perturbation growth. Comparisons with LASNEX simulations will be presented. *This work supported under USDOE contract W-7405-ENG-36.

Numerical solution of the Hele-Shaw equations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Whitaker, N.

1987-04-01

An algorithm is presented for approximating the motion of the interface between two immiscible fluids in a Hele-Shaw cell. The interface is represented by a set of volume fractions. We use the Simple Line Interface Calculation method along with the method of fractional steps to transport the interface. The equation of continuity leads to a Poisson equation for the pressure. The Poisson equation is discretized. Near the interface where the velocity field is discontinuous, the discretization is based on a weak formulation of the continuity equation. Interpolation is used on each side of the interface to increase the accuracy ofmore » the algorithm. The weak formulation as well as the interpolation are based on the computed volume fractions. This treatment of the interface is new. The discretized equations are solved by a modified conjugate gradient method. Surface tension is included and the curvature is computed through the use of osculating circles. For perturbations of small amplitude, a surprisingly good agreement is found between the numerical results and linearized perturbation theory. Numerical results are presented for the finite amplitude growth of unstable fingers. 62 refs., 13 figs.« less

Pinning by rare defects and effective mobility for elastic interfaces in high dimensions

NASA Astrophysics Data System (ADS)

Cao, Xiangyu; Démery, Vincent; Rosso, Alberto

2018-06-01

The existence of a depinning transition for a high dimensional interface in a weakly disordered medium is controversial. Following Larkin arguments and a perturbative expansion, one expects a linear response with a renormalized mobility . In this paper, we compare these predictions with the exact solution of a fully connected model, which displays a finite critical force . At small disorder, we unveil an intermediary linear regime for characterized by the renormalized mobility . Our results suggest that in high dimension the critical force is always finite and determined by the effect of rare impurities that is missed by the perturbative expansion. However, the perturbative expansion correctly describes an intermediate regime that should be visible at small disorder.

Stability of a two-volume MRxMHD model in slab geometry

NASA Astrophysics Data System (ADS)

Tuen, Li Huey

Ideal MHD models are known to be inadequate to describe various physical attributes of a toroidal field with non-continuous symmetry, such as magnetic islands and stochastic regions. Motivated by this omission, a new variational principle MRXMHD was developed; rather than include an infinity of magnetic flux surfaces, MRxMHD has a finite number of flux surfaces, and thus supports partial plasma relaxation. The model comprises of relaxed plasma regions which are separated by nested ideal MHD interfaces (flux surfaces), and can be encased in a perfectly conducting wall. In each region the pressure is constant, but can jump across interfaces. The field and field pitch, or rotational transform, can also jump across the interfaces. Unlike ideal MHD, MRxMHD plasmas can support toroidally non-axisymmetric confined magnetic fields, magnetic islands and stochastic regions. In toroidally non-axisymmetric plasma, the existence of interfaces in MRxMHD is contingent on the irrationality of the rotational transform of flux surfaces. That is, the KAM theorem shows that invariant tori (flux surfaces) continue to exist for sufficiently small perturbations to an integrable system (which describes flux surfaces), provided that the rotational transform is sufficiently irrational. Building upon the MRxMHD stability model, we study the effects of irrationality of the rotational transform at interfaces in MRxMHD on plasma stability. We present an MRxMHD equilibrium model to investigate the effects of magnetic field pitch within the plasma and across the aforementioned flux surfaces within a chosen geometry. In this model, it is found that the 2D system stability conditions are dependent on the interface and resonant surface magnetic field pitch at minimised energy states, and the stability of a system as a function of magnetic field pitch destabilises at particular values of magnetic field pitch. We benchmark the treatment of a two-volume system, along with the calculations for background and perturbed magnetic fields to existing cylindrical working. An expression is formulated for the stability eigenvalues by creating a model for the slab geometry system. The eigenvalues for system stability at a minimum energy state are found to depend upon the rationality of the magnetic field pitch at resonant surfaces. Various system parameter scans are conducted to determine their affect upon system stability and their implications. While tearing instabilities exist at low order rational resonances, investigating the instability of high-order rationals requires study of pressure-driven instabilities.

Nonlinear theory of classical cylindrical Richtmyer-Meshkov instability for arbitrary Atwood numbers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Wan Hai; HEDPS and CAPT, Peking University, Beijing 100871; Ping Yu, Chang, E-mail: champion-yu@163.com

2014-06-15

A nonlinear theory is developed to describe the cylindrical Richtmyer-Meshkov instability (RMI) of an impulsively accelerated interface between incompressible fluids, which is based on both a technique of Padé approximation and an approach of perturbation expansion directly on the perturbed interface rather than the unperturbed interface. When cylindrical effect vanishes (i.e., in the large initial radius of the interface), our explicit results reproduce those [Q. Zhang and S.-I. Sohn, Phys. Fluids 9, 1106 (1996)] related to the planar RMI. The present prediction in agreement with previous simulations [C. Matsuoka and K. Nishihara, Phys. Rev. E 73, 055304(R) (2006)] leads usmore » to better understand the cylindrical RMI at arbitrary Atwood numbers for the whole nonlinear regime. The asymptotic growth rate of the cylindrical interface finger (bubble or spike) tends to its initial value or zero, depending upon mode number of the initial cylindrical interface and Atwood number. The explicit conditions, directly affecting asymptotic behavior of the cylindrical interface finger, are investigated in this paper. This theory allows a straightforward extension to other nonlinear problems related closely to an instable interface.« less

In-situ probing of coupled atomic restructuring and metallicity of oxide heterointerfaces induced by polar adsorbates

NASA Astrophysics Data System (ADS)

Ryu, S.; Zhou, H.; Paudel, T. R.; Irwin, J.; Podkaminer, J. P.; Bark, C. W.; Lee, D.; Kim, T. H.; Fong, D. D.; Rzchowski, M. S.; Tsymbal, E. Y.; Eom, C. B.

2017-10-01

Microscopic understanding of the surface-controlled conductivity of the two dimensional electron gas at complex oxide interfaces is crucial for developing functional interfaces. We observe conductivity and structural modification using in-situ synchrotron surface x-ray diffraction as the surface of a model LaAlO3/SrTiO3 (001) heterostructure is changed by polar adsorbates. We find that polar adsorbate-induced interfacial metallicity reduces polar distortions in the LaAlO3 layer. First-principles density functional theory calculations show that surface dipoles introduced by polar adsorbates lead to additional charge transfer and the reduction of polar displacements in the LaAlO3 layer, consistent with the experimental observations. Our study supports that internal structural deformations controlling functionalities can be driven without the application of direct electrical or thermal bias and offers a route to tuning interfacial properties. These results also highlight the important role of in-situ x-ray scattering with atomic resolution in capturing and exploring structural distortions and charge density changes caused by external perturbations such as chemical adsorption, redox reaction, and generation and/or annihilation of surface defects.

Computational investigation of reshock strength in hydrodynamic instability growth at the National Ignition Facility

NASA Astrophysics Data System (ADS)

Bender, Jason; Raman, Kumar; Huntington, Channing; Nagel, Sabrina; Morgan, Brandon; Prisbrey, Shon; MacLaren, Stephan

2017-10-01

Experiments at the National Ignition Facility (NIF) are studying Richtmyer-Meshkov and Rayleigh-Taylor hydrodynamic instabilities in multiply-shocked plasmas. Targets feature two different-density fluids with a multimode initial perturbation at the interface, which is struck by two X-ray-driven shock waves. Here we discuss computational hydrodynamics simulations investigating the effect of second-shock (``reshock'') strength on instability growth, and how these simulations are informing target design for the ongoing experimental campaign. A Reynolds-Averaged Navier Stokes (RANS) model was used to predict motion of the spike and bubble fronts and the mixing-layer width. In addition to reshock strength, the reshock ablator thickness and the total length of the target were varied; all three parameters were found to be important for target design, particularly for ameliorating undesirable reflected shocks. The RANS data are compared to theoretical models that predict multimode instability growth proportional to the shock-induced change in interface velocity, and to currently-available data from the NIF experiments. Work performed under the auspices of the U.S. D.O.E. by Lawrence Livermore National Laboratory under Contract No. DE-AC52-07NA27344. LLNL-ABS-734611.

Light and redox switchable molecular components for molecular electronics.

PubMed

Browne, Wesley R; Feringa, Ben L

2010-01-01

The field of molecular and organic electronics has seen rapid progress in recent years, developing from concept and design to actual demonstration devices in which both single molecules and self-assembled monolayers are employed as light-responsive components. Research in this field has seen numerous unexpected challenges that have slowed progress and the initial promise of complex molecular-based computers has not yet been realised. Primarily this has been due to the realisation at an early stage that molecular-based nano-electronics brings with it the interface between the hard (semiconductor) and soft (molecular) worlds and the challenges which accompany working in such an environment. Issues such as addressability, cross-talk, molecular stability and perturbation of molecular properties (e.g., inhibition of photochemistry) have nevertheless driven development in molecular design and synthesis as well as our ability to interface molecular components with bulk metal contacts to a very high level of sophistication. Numerous groups have played key roles in progressing this field not least teams such as those led by Whitesides, Aviram, Ratner, Stoddart and Heath. In this short review we will however focus on the contributions from our own group and those of our collaborators, in employing diarylethene based molecular components.

In-situ probing of coupled atomic restructuring and metallicity of oxide heterointerfaces induced by polar adsorbates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ryu, S.; Zhou, H.; Paudel, T. R.

Microscopic understanding of the surface-controlled conductivity of the two dimensional electron gas at complex oxide interfaces is crucial for developing functional interfaces. We observe conductivity and structural modification using in-situ synchrotron surface x-ray diffraction as the surface of a model LaAlO3/SrTiO3 (001) heterostructure is changed by polar adsorbates. We find that polar adsorbate-induced interfacial metallicity reduces polar distortions in the LaAlO3 layer. First-principles density functional theory calculations show that surface dipoles introduced by polar adsorbates lead to additional charge transfer and the reduction of polar displacements in the LaAlO3 layer, consistent with the experimental observations. Our study supports that internalmore » structural deformations controlling functionalities can be driven without the application of direct electrical or thermal bias and offers a route to tuning interfacial properties. These results also highlight the important role of in-situ x-ray scattering with atomic resolution in capturing and exploring structural distortions and charge density changes caused by external perturbations such as chemical adsorption, redox reaction, and generation and/or annihilation of surface defects.« less

Electronic structure of dye-sensitized TiO2 clusters from many-body perturbation theory

NASA Astrophysics Data System (ADS)

Marom, Noa; Moussa, Jonathan E.; Ren, Xinguo; Tkatchenko, Alexandre; Chelikowsky, James R.

2011-12-01

The development of new types of solar cells is driven by the need for clean and sustainable energy. In this respect dye-sensitized solar cells (DSC) are considered as a promising route for departing from the traditional solid state cells. The physical insight provided by computational modeling may help develop improved DSCs. To this end, it is important to obtain an accurate description of the electronic structure, including the fundamental gaps and level alignment at the dye-TiO2 interface. This requires a treatment beyond ground-state density functional theory (DFT). We present a many-body perturbation theory study, within the G0W0 approximation, of two of the crystalline phases of dye-sensitized TiO2 clusters, reported by Benedict and Coppens, [J. Am. Chem. Soc.JACSAT0002-786310.1021/ja909600w 132, 2938 (2010)]. We obtain geometries in good agreement with the experiment by using DFT with the Tkatchenko-Scheffler van der Waals correction. We demonstrate that even when DFT gives a good description of the valence spectrum and a qualitatively correct picture of the electronic structure of the dye-TiO2 interface, G0W0 calculations yield more valuable quantitative information regarding the fundamental gaps and level alignment. In addition, we systematically investigate the issues pertaining to G0W0 calculations, namely: (i) convergence with respect to the number of basis functions, (ii) dependence on the mean-field starting point, and (iii) the validity of the assumption that the DFT wave function is a good approximation to the quasiparticle wave function. We show how these issues are manifested for dye molecules and for dye-sensitized TiO2 clusters.

Stability, intermittency and universal Thorpe length distribution in a laboratory turbulent stratified shear flow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Odier, Philippe; Ecke, Robert E.

Stratified shear flows occur in many geophysical contexts, from oceanic overflows and river estuaries to wind-driven thermocline layers. In this study, we explore a turbulent wall-bounded shear flow of lighter miscible fluid into a quiescent fluid of higher density with a range of Richardson numbersmore » $$0.05\\lesssim Ri\\lesssim 1$$. In order to find a stability parameter that allows close comparison with linear theory and with idealized experiments and numerics, we investigate different definitions of$Ri$$. We find that a gradient Richardson number defined on fluid interface sections where there is no overturning at or adjacent to the maximum density gradient position provides an excellent stability parameter, which captures the Miles–Howard linear stability criterion. For small $$Ri$$ the flow exhibits robust Kelvin–Helmholtz instability, whereas for larger $$Ri$$ interfacial overturning is more intermittent with less frequent Kelvin–Helmholtz events and emerging Holmboe wave instability consistent with a thicker velocity layer compared with the density layer. We compute the perturbed fraction of interface as a quantitative measure of the flow intermittency, which is approximately 1 for the smallest $$Ri$$ but decreases rapidly as $$Ri$ increases, consistent with linear theory. For the perturbed regions, we use the Thorpe scale to characterize the overturning properties of these flows. The probability distribution of the non-zero Thorpe length yields a universal exponential form, suggesting that much of the overturning results from increasingly intermittent Kelvin–Helmholtz instability events. Finally, the distribution of turbulent kinetic energy, conditioned on the intermittency fraction, has a similar form, suggesting an explanation for the universal scaling collapse of the Thorpe length distribution.« less

Stability, intermittency and universal Thorpe length distribution in a laboratory turbulent stratified shear flow

DOE PAGES

Odier, Philippe; Ecke, Robert E.

2017-02-21

Stratified shear flows occur in many geophysical contexts, from oceanic overflows and river estuaries to wind-driven thermocline layers. In this study, we explore a turbulent wall-bounded shear flow of lighter miscible fluid into a quiescent fluid of higher density with a range of Richardson numbersmore » $$0.05\\lesssim Ri\\lesssim 1$$. In order to find a stability parameter that allows close comparison with linear theory and with idealized experiments and numerics, we investigate different definitions of$Ri$$. We find that a gradient Richardson number defined on fluid interface sections where there is no overturning at or adjacent to the maximum density gradient position provides an excellent stability parameter, which captures the Miles–Howard linear stability criterion. For small $$Ri$$ the flow exhibits robust Kelvin–Helmholtz instability, whereas for larger $$Ri$$ interfacial overturning is more intermittent with less frequent Kelvin–Helmholtz events and emerging Holmboe wave instability consistent with a thicker velocity layer compared with the density layer. We compute the perturbed fraction of interface as a quantitative measure of the flow intermittency, which is approximately 1 for the smallest $$Ri$$ but decreases rapidly as $$Ri$ increases, consistent with linear theory. For the perturbed regions, we use the Thorpe scale to characterize the overturning properties of these flows. The probability distribution of the non-zero Thorpe length yields a universal exponential form, suggesting that much of the overturning results from increasingly intermittent Kelvin–Helmholtz instability events. Finally, the distribution of turbulent kinetic energy, conditioned on the intermittency fraction, has a similar form, suggesting an explanation for the universal scaling collapse of the Thorpe length distribution.« less

An integral-factorized implementation of the driven similarity renormalization group second-order multireference perturbation theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hannon, Kevin P.; Li, Chenyang; Evangelista, Francesco A., E-mail: francesco.evangelista@emory.edu

2016-05-28

We report an efficient implementation of a second-order multireference perturbation theory based on the driven similarity renormalization group (DSRG-MRPT2) [C. Li and F. A. Evangelista, J. Chem. Theory Comput. 11, 2097 (2015)]. Our implementation employs factorized two-electron integrals to avoid storage of large four-index intermediates. It also exploits the block structure of the reference density matrices to reduce the computational cost to that of second-order Møller–Plesset perturbation theory. Our new DSRG-MRPT2 implementation is benchmarked on ten naphthyne isomers using basis sets up to quintuple-ζ quality. We find that the singlet-triplet splittings (Δ{sub ST}) of the naphthyne isomers strongly depend onmore » the equilibrium structures. For a consistent set of geometries, the Δ{sub ST} values predicted by the DSRG-MRPT2 are in good agreements with those computed by the reduced multireference coupled cluster theory with singles, doubles, and perturbative triples.« less

Selective enhancement of Selényi rings induced by the cross-correlation between the interfaces of a two-dimensional randomly rough dielectric film

NASA Astrophysics Data System (ADS)

Banon, J.-P.; Hetland, Ø. S.; Simonsen, I.

2018-02-01

By the use of both perturbative and non-perturbative solutions of the reduced Rayleigh equation, we present a detailed study of the scattering of light from two-dimensional weakly rough dielectric films. It is shown that for several rough film configurations, Selényi interference rings exist in the diffusely scattered light. For film systems supported by dielectric substrates where only one of the two interfaces of the film is weakly rough and the other planar, Selényi interference rings are observed at angular positions that can be determined from simple phase arguments. For such single-rough-interface films, we find and explain by a single scattering model that the contrast in the interference patterns is better when the top interface of the film (the interface facing the incident light) is rough than when the bottom interface is rough. When both film interfaces are rough, Selényi interference rings exist but a potential cross-correlation of the two rough interfaces of the film can be used to selectively enhance some of the interference rings while others are attenuated and might even disappear. This feature may in principle be used in determining the correlation properties of interfaces of films that otherwise would be difficult to access.

A Venturi microregulator array module for distributed pressure control

PubMed Central

Chang, Dustin S.; Langelier, Sean M.; Zeitoun, Ramsey I.

2010-01-01

Pressure-driven flow control systems are a critical component in many microfluidic devices. Compartmentalization of this functionality into a stand-alone module possessing a simple interface would allow reduction of the number of pneumatic interconnects required for fluidic control. Ideally, such a module would also be sufficiently compact for implementation in portable platforms. In our current work, we show the feasibility of using a modular array of Venturi pressure microregulators for coordinated droplet manipulation. The arrayed microregulators share a single pressure input and are capable of outputting electronically controlled pressures that can be independently set between ±1.3 kPa. Because the Venturi microregulator operates by thermal perturbation of a choked gas flow, this output range corresponds to a temperature variation between 20 and 95°C. Using the array, we demonstrate loading, splitting, merging, and independent movement of multiple droplets in a valveless microchannel network. PMID:20938490

Temperature in subsonic and supersonic radiation fronts measured at OMEGA

NASA Astrophysics Data System (ADS)

Johns, Heather; Kline, John; Lanier, Nick; Perry, Ted; Fontes, Chris; Fryer, Chris; Brown, Colin; Morton, John

2017-10-01

Propagation of heat fronts relevant to astrophysical plasmas is challenging in the supersonic regime. Plasma Te changes affect opacity and equation of state without hydrodynamic change. In the subsonic phase density perturbations form at material interfaces as the plasma responds to radiation pressure of the front. Recent experiments at OMEGA studied this transition in aerogel foams driven by a hohlraum. In COAX, two orthogonal backlighters drive x-ray radiography and K-shell absorption spectroscopy to diagnose the subsonic shape of the front and supersonic Te profiles. Past experiments used absorption spectroscopy in chlorinated foams to measure the heat front; however, Cl dopant is not suitable for higher material temperatures at NIF. COAX has developed use of Sc and Ti dopants to diagnose Te between 60-100eV and 100-180eV. Analysis with PrismSPECT using OPLIB tabular opacity data will evaluate the platform's ability to advance radiation transport in this regime.

Observation of topologically protected bound states in photonic quantum walks.

PubMed

Kitagawa, Takuya; Broome, Matthew A; Fedrizzi, Alessandro; Rudner, Mark S; Berg, Erez; Kassal, Ivan; Aspuru-Guzik, Alán; Demler, Eugene; White, Andrew G

2012-06-06

Topological phases exhibit some of the most striking phenomena in modern physics. Much of the rich behaviour of quantum Hall systems, topological insulators, and topological superconductors can be traced to the existence of robust bound states at interfaces between different topological phases. This robustness has applications in metrology and holds promise for future uses in quantum computing. Engineered quantum systems--notably in photonics, where wavefunctions can be observed directly--provide versatile platforms for creating and probing a variety of topological phases. Here we use photonic quantum walks to observe bound states between systems with different bulk topological properties and demonstrate their robustness to perturbations--a signature of topological protection. Although such bound states are usually discussed for static (time-independent) systems, here we demonstrate their existence in an explicitly time-dependent situation. Moreover, we discover a new phenomenon: a topologically protected pair of bound states unique to periodically driven systems.

Generalized Stability Analysis of Capillary Flow in Slender V-Grooves

NASA Astrophysics Data System (ADS)

White, Nicholas; Troian, Sandra

2017-11-01

Spontaneous capillary flow, an especially rapid process in slender open microchannels resembling V-grooves, is of significant importance to many applications requiring passive robust flow control. Many types of biomedical devices for point-of-care use in developing countries are being designed around this principle. Important fundamental work by Romero and Yost (1996) and Weislogel (1996) elucidated the behavior of Newtonian films in slender V-grooves driven to flow by the streamwise change in capillary pressure due to the change in radius of curvature of the circular arc describing the interface of wetting or non-wetting fluids. Self-similar solutions describing Washburn type dynamics were found but other solutions are possible. Here we extend the Romero and Yost model to include a variety of inlet and outlet boundary conditions and examine the transient growth and generalized stability of perturbations to steady state and self-similar flows. Although most cases examined for wetting fluids exhibit robust stability against small perturbations, some exceptions reveal unstable flow. In total, these results support decades of experimental work which has found this method of flow control to be especially reliable, robust and self-healing. The authors gratefully acknowledge financial support from the 2016 NASA/Jet Propulsion Laboratory President's and Director's Fund as well as a 2017 NASA Space Technology Research Fellowship.

Nonlinear Saturation Amplitude in Classical Planar Richtmyer-Meshkov Instability

NASA Astrophysics Data System (ADS)

Liu, Wan-Hai; Wang, Xiang; Jiang, Hong-Bin; Ma, Wen-Fang

2016-04-01

The classical planar Richtmyer-Meshkov instability (RMI) at a fluid interface supported by a constant pressure is investigated by a formal perturbation expansion up to the third order, and then according to definition of nonlinear saturation amplitude (NSA) in Rayleigh-Taylor instability (RTI), the NSA in planar RMI is obtained explicitly. It is found that the NSA in planar RMI is affected by the initial perturbation wavelength and the initial amplitude of the interface, while the effect of the initial amplitude of the interface on the NSA is less than that of the initial perturbation wavelength. Without marginal influence of the initial amplitude, the NSA increases linearly with wavelength. The NSA normalized by the wavelength in planar RMI is about 0.11, larger than that corresponding to RTI. Supported by the National Natural Science Foundation of China under Grant Nos. 11472278 and 11372330, the Scientific Research Foundation of Education Department of Sichuan Province under Grant No. 15ZA0296, the Scientific Research Foundation of Mianyang Normal University under Grant Nos. QD2014A009 and 2014A02, and the National High-Tech ICF Committee

Using scattering theory to compute invariant manifolds and numerical results for the laser-driven Hénon-Heiles system.

PubMed

Blazevski, Daniel; Franklin, Jennifer

2012-12-01

Scattering theory is a convenient way to describe systems that are subject to time-dependent perturbations which are localized in time. Using scattering theory, one can compute time-dependent invariant objects for the perturbed system knowing the invariant objects of the unperturbed system. In this paper, we use scattering theory to give numerical computations of invariant manifolds appearing in laser-driven reactions. In this setting, invariant manifolds separate regions of phase space that lead to different outcomes of the reaction and can be used to compute reaction rates.

Identification of Stochastically Perturbed Autonomous Systems from Temporal Sequences of Probability Density Functions

NASA Astrophysics Data System (ADS)

Nie, Xiaokai; Luo, Jingjing; Coca, Daniel; Birkin, Mark; Chen, Jing

2018-03-01

The paper introduces a method for reconstructing one-dimensional iterated maps that are driven by an external control input and subjected to an additive stochastic perturbation, from sequences of probability density functions that are generated by the stochastic dynamical systems and observed experimentally.

Filamentation of a surface plasma wave over a semiconductor-free space interface

NASA Astrophysics Data System (ADS)

Kumar, Gagan; Tripathi, V. K.

2007-12-01

A large amplitude surface plasma wave (SPW), propagating over a semiconductor-free space interface, is susceptible to filamentation instability. A small perturbation in the amplitude of the SPW across the direction of propagation exerts a ponderomotive force on free electrons and holes, causing spatial modulation in free carrier density and hence the effective permittivity ɛeff of the semiconductor. The regions with higher ɛeff attract more power from the nieghborhood, leading to the growth of the perturbation. The growth rate increases with the intensity of the surface wave. It decreases with the frequency of the SPW.

Self-assembly of thin, triangular prisms into open networks at a flat air-water interface

NASA Astrophysics Data System (ADS)

Solomon, Michael; Ferrar, Joseph; Bedi, Deshpreet; Zhou, Shangnan; Mao, Xiaoming

We observe capillary-driven binding between thin, equilateral triangle microprisms at a flat air-water interface. The triangles are fabricated from epoxy resin via SU-8 photolithography. For small thickness to length (T/L) ratios, two distinct pairwise particle-particle binding events occur with roughly equal frequency, and optical and environmental scanning electron microscopy (eSEM) demonstrate that these two distinct binding events are driven by the specific manner in which the interface is pinned to the particle surface. Additionally, particle bending is observed for the lowest T/L ratios, which leads to enhanced interface curvature and thus enhanced strength of capillary-driven attractions, and may also play a pivotal role in the dichotomy in particle-particle binding. Dichotomy in particle-particle binding is not observed at thicker T/L ratios, although capillary-driven binding still occurs. Ultimately, the particles self-assemble into space-spanning open networks, and the results suggest design parameters for the fabrication of building blocks of ordered open structures, such as the Kagome lattice.

Interaction of Gortler vortices and Tollmien-Schlichting waves in curved channel flow

NASA Technical Reports Server (NTRS)

Daudpota, Q. Isa; Zang, Thomas A.; Hall, Philip

1987-01-01

The flow in a two-dimensional curved channel driven by an azimuthal pressure gradient can become linearly unstable due to axisymmetric perturbations and/or nonaxisymmetric perturbations depending on the curvature of the channel and the Reynolds number. For a particular small value of curvature, the critical Reynolds number for both these perturbations becomes identical. In the neighborhood of this curvature value and critical Reynolds number, nonlinear interactions occur between these perturbations. The Stuart-Watson approach is used to derive two coupled Landau equations for the amplitudes of these perturbations. The stability of the various possible states of these perturbations is shown through bifurcation diagrams. Emphasis is given to those cases which have relevance to external flows.

Structure-Based Analysis Reveals Cancer Missense Mutations Target Protein Interaction Interfaces.

PubMed

Engin, H Billur; Kreisberg, Jason F; Carter, Hannah

2016-01-01

Recently it has been shown that cancer mutations selectively target protein-protein interactions. We hypothesized that mutations affecting distinct protein interactions involving established cancer genes could contribute to tumor heterogeneity, and that novel mechanistic insights might be gained into tumorigenesis by investigating protein interactions under positive selection in cancer. To identify protein interactions under positive selection in cancer, we mapped over 1.2 million nonsynonymous somatic cancer mutations onto 4,896 experimentally determined protein structures and analyzed their spatial distribution. In total, 20% of mutations on the surface of known cancer genes perturbed protein-protein interactions (PPIs), and this enrichment for PPI interfaces was observed for both tumor suppressors (Odds Ratio 1.28, P-value < 10(-4)) and oncogenes (Odds Ratio 1.17, P-value < 10(-3)). To study this further, we constructed a bipartite network representing structurally resolved PPIs from all available human complexes in the Protein Data Bank (2,864 proteins, 3,072 PPIs). Analysis of frequently mutated cancer genes within this network revealed that tumor-suppressors, but not oncogenes, are significantly enriched with functional mutations in homo-oligomerization regions (Odds Ratio 3.68, P-Value < 10(-8)). We present two important examples, TP53 and beta-2-microglobulin, for which the patterns of somatic mutations at interfaces provide insights into specifically perturbed biological circuits. In patients with TP53 mutations, patient survival correlated with the specific interactions that were perturbed. Moreover, we investigated mutations at the interface of protein-nucleotide interactions and observed an unexpected number of missense mutations but not silent mutations occurring within DNA and RNA binding sites. Finally, we provide a resource of 3,072 PPI interfaces ranked according to their mutation rates. Analysis of this list highlights 282 novel candidate cancer genes that encode proteins participating in interactions that are perturbed recurrently across tumors. In summary, mutation of specific protein interactions is an important contributor to tumor heterogeneity and may have important implications for clinical outcomes.

Misfit strain driven cation inter-diffusion across an epitaxial multiferroic thin film interface

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sankara Rama Krishnan, P. S.; Munroe, Paul; Nagarajan, V.

Cation intermixing at functional oxide interfaces remains a highly controversial area directly relevant to interface-driven nanoelectronic device properties. Here, we systematically explore the cation intermixing in epitaxial (001) oriented multiferroic bismuth ferrite (BFO) grown on a (001) lanthanum aluminate (LAO) substrate. Aberration corrected dedicated scanning transmission electron microscopy and electron energy loss spectroscopy reveal that the interface is not chemically sharp, but with an intermixing of ∼2 nm. The driving force for this process is identified as misfit-driven elastic strain. Landau-Ginzburg-Devonshire-based phenomenological theory was combined with the Sheldon and Shenoy formula in order to understand the influence of boundary conditions andmore » depolarizing fields arising from misfit strain between the LAO substrate and BFO film. The theory predicts the presence of a strong potential gradient at the interface, which decays on moving into the bulk of the film. This potential gradient is significant enough to drive the cation migration across the interface, thereby mitigating the misfit strain. Our results offer new insights on how chemical roughening at oxide interfaces can be effective in stabilizing the structural integrity of the interface without the need for misfit dislocations. These findings offer a general formalism for understanding cation intermixing at highly strained oxide interfaces that are used in nanoelectronic devices.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fujiwara, K., E-mail: ku.fujiwara@screen.co.jp; Department of Mechanical Engineering, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871; Shibahara, M., E-mail: siba@mech.eng.osaka-u.ac.jp

A classical molecular dynamics simulation was conducted for a system composed of fluid molecules between two planar solid surfaces, and whose interactions are described by the 12-6 Lennard-Jones form. This paper presents a general description of the pressure components and interfacial tension at a fluid-solid interface obtained by the perturbative method on the basis of statistical thermodynamics, proposes a method to consider the pressure components tangential to an interface which are affected by interactions with solid atoms, and applies this method to the calculation system. The description of the perturbative method is extended to subsystems, and the local pressure componentsmore » and interfacial tension at a liquid-solid interface are obtained and examined in one- and two-dimensions. The results are compared with those obtained by two alternative methods: (a) an evaluation of the intermolecular force acting on a plane, and (b) the conventional method based on the virial expression. The accuracy of the numerical results is examined through the comparison of the results obtained by each method. The calculated local pressure components and interfacial tension of the fluid at a liquid-solid interface agreed well with the results of the two alternative methods at each local position in one dimension. In two dimensions, the results showed a characteristic profile of the tangential pressure component which depended on the direction tangential to the liquid-solid interface, which agreed with that obtained by the evaluation of the intermolecular force acting on a plane in the present study. Such good agreement suggests that the perturbative method on the basis of statistical thermodynamics used in this study is valid to obtain the local pressure components and interfacial tension at a liquid-solid interface.« less

Keldysh meets Lindblad: Correlated Gain and Loss in Higher Order Perturbation Theory

NASA Astrophysics Data System (ADS)

Stace, Tom; Mueller, Clemens

Motivated by correlated decay processes driving gain, loss and lasing in driven artificial quantum systems, we develop a theoretical technique using Keldysh diagrammatic perturbation theory to derive a Lindblad master equation that goes beyond the usual second order perturbation theory. We demonstrate the method on the driven dissipative Rabi model, including terms up to fourth order in the interaction between the qubit and both the resonator and environment. This results in a large class of Lindblad dissipators and associated rates which go beyond the terms that have previously been proposed to describe similar systems. All of the additional terms contribute to the system behaviour at the same order of perturbation theory. We then apply these results to analyse the phonon-assisted steady-state gain of a microwave field driving a double quantum-dot in a resonator. We show that resonator gain and loss are substantially affected by dephasing- assisted dissipative processes in the quantum-dot system. These additional processes, which go beyond recently proposed polaronic theories, are in good quantitative agreement with experimental observations.

Pumping approximately integrable systems

PubMed Central

Lange, Florian; Lenarčič, Zala; Rosch, Achim

2017-01-01

Weak perturbations can drive an interacting many-particle system far from its initial equilibrium state if one is able to pump into degrees of freedom approximately protected by conservation laws. This concept has for example been used to realize Bose–Einstein condensates of photons, magnons and excitons. Integrable quantum systems, like the one-dimensional Heisenberg model, are characterized by an infinite set of conservation laws. Here, we develop a theory of weakly driven integrable systems and show that pumping can induce large spin or heat currents even in the presence of integrability breaking perturbations, since it activates local and quasi-local approximate conserved quantities. The resulting steady state is qualitatively captured by a truncated generalized Gibbs ensemble with Lagrange parameters that depend on the structure but not on the overall amplitude of perturbations nor the initial state. We suggest to use spin-chain materials driven by terahertz radiation to realize integrability-based spin and heat pumps. PMID:28598444

Rayleigh-Taylor instability under curved substrates: An optimal transient growth analysis

NASA Astrophysics Data System (ADS)

Balestra, Gioele; Brun, P.-T.; Gallaire, François

2016-12-01

We investigate the stability of thin viscous films coated on the inside of a horizontal cylindrical substrate. In such a case, gravity acts both as a stabilizing force through the progressive drainage of the film and as a destabilizing force prone to form droplets via the Rayleigh-Taylor instability. The drainage solution, derived from lubrication equations, is found asymptotically stable with respect to infinitesimally small perturbations, although in reality, droplets often form. To resolve this paradox, we perform an optimal transient growth analysis for the first-order perturbations of the liquid's interface, generalizing the results of Trinh et al. [Phys. Fluids 26, 051704 (2014), 10.1063/1.4876476]. We find that the system displays a linear transient growth potential that gives rise to two different scenarios depending on the value of the Bond number (prescribing the relative importance of gravity and surface tension forces). At low Bond numbers, the optimal perturbation of the interface does not generate droplets. In contrast, for higher Bond numbers, perturbations on the upper hemicircle yield gains large enough to potentially form droplets. The gain increases exponentially with the Bond number. In particular, depending on the amplitude of the initial perturbation, we find a critical Bond number above which the short-time linear growth is sufficient to trigger the nonlinear effects required to form dripping droplets. We conclude that the transition to droplets detaching from the substrate is noise and perturbation dependent.

On the nonlinear interaction of Goertler vortices and Tollmien-Schlichting waves in curved channel flows at finite Reynolds numbers

NASA Technical Reports Server (NTRS)

Daudpota, Q. Isa; Zang, Thomas A.; Hall, Philip

1988-01-01

The flow in a two-dimensional curved channel driven by an azimuthal pressure gradient can become linearly unstable due to axisymmetric perturbations and/or nonaxisymmetric perturbations depending on the curvature of the channel and the Reynolds number. For a particular small value of curvature, the critical neighborhood of this curvature value and critical Reynolds number, nonlinear interactions occur between these perturbations. The Stuart-Watson approach is used to derive two coupled Landau equations for the amplitudes of these perturbations. The stability of the various possible states of these perturbations is shown through bifurcation diagrams. Emphasis is given to those cases which have relevance to external flows.

On the nonlinear interaction of Gortler vortices and Tollmien-Schlichting waves in curved channel flows at finite Reynolds numbers

NASA Technical Reports Server (NTRS)

Daudpota, Q. Isa; Hall, Philip; Zang, Thomas A.

1987-01-01

The flow in a two-dimensional curved channel driven by an azimuthal pressure gradient can become linearly unstable due to axisymmetric perturbations and/or nonaxisymmetric perturbations depending on the curvature of the channel and the Reynolds number. For a particular small value of curvature, the critical neighborhood of this curvature value and critical Reynolds number, nonlinear interactions occur between these perturbations. The Stuart-Watson approach is used to derive two coupled Landau equations for the amplitudes of these perturbations. The stability of the various possible states of these perturbations is shown through bifurcation diagrams. Emphasis is given to those cases which have relevance to external flows.

Bending response of cross-ply laminated composite plates with diagonally perturbed localized interfacial degeneration.

PubMed

Kam, Chee Zhou; Kueh, Ahmad Beng Hong

2013-01-01

A laminated composite plate element with an interface description is developed using the finite element approach to investigate the bending performance of two-layer cross-ply laminated composite plates in presence of a diagonally perturbed localized interfacial degeneration between laminae. The stiffness of the laminate is expressed through the assembly of the stiffnesses of lamina sub-elements and interface element, the latter of which is formulated adopting the well-defined virtually zero-thickness concept. To account for the extent of both shear and axial weak bonding, a degeneration ratio is introduced in the interface formulation. The model has the advantage of simulating a localized weak bonding at arbitrary locations, with various degeneration areas and intensities, under the influence of numerous boundary conditions since the interfacial description is expressed discretely. Numerical results show that the bending behavior of laminate is significantly affected by the aforementioned parameters, the greatest effect of which is experienced by those with a localized total interface degeneration, representing the case of local delamination.

On the detection and attribution of gravity waves generated by the 20 March 2015 solar eclipse

PubMed Central

2016-01-01

Internal gravity waves are generated as adjustment radiation whenever a sudden change in forcing causes the atmosphere to depart from its large-scale balanced state. Such a forcing anomaly occurs during a solar eclipse, when the Moon’s shadow cools part of the Earth’s surface. The resulting atmospheric gravity waves are associated with pressure and temperature perturbations, which in principle are detectable both at the surface and aloft. In this study, surface pressure and temperature data from two UK sites at Reading and Lerwick are examined for eclipse-driven gravity wave perturbations during the 20 March 2015 solar eclipse over northwest Europe. Radiosonde wind data from the same two sites are also analysed using a moving parcel analysis method, to determine the periodicities of the waves aloft. On this occasion, the perturbations both at the surface and aloft are found not to be confidently attributable to eclipse-driven gravity waves. We conclude that the complex synoptic weather conditions over the UK at the time of this particular eclipse helped to mask any eclipse-driven gravity waves. This article is part of the themed issue ‘Atmospheric effects of solar eclipses stimulated by the 2015 UK eclipse’. PMID:27550763

On the detection and attribution of gravity waves generated by the 20 March 2015 solar eclipse.

PubMed

Marlton, G J; Williams, P D; Nicoll, K A

2016-09-28

Internal gravity waves are generated as adjustment radiation whenever a sudden change in forcing causes the atmosphere to depart from its large-scale balanced state. Such a forcing anomaly occurs during a solar eclipse, when the Moon's shadow cools part of the Earth's surface. The resulting atmospheric gravity waves are associated with pressure and temperature perturbations, which in principle are detectable both at the surface and aloft. In this study, surface pressure and temperature data from two UK sites at Reading and Lerwick are examined for eclipse-driven gravity wave perturbations during the 20 March 2015 solar eclipse over northwest Europe. Radiosonde wind data from the same two sites are also analysed using a moving parcel analysis method, to determine the periodicities of the waves aloft. On this occasion, the perturbations both at the surface and aloft are found not to be confidently attributable to eclipse-driven gravity waves. We conclude that the complex synoptic weather conditions over the UK at the time of this particular eclipse helped to mask any eclipse-driven gravity waves.This article is part of the themed issue 'Atmospheric effects of solar eclipses stimulated by the 2015 UK eclipse'. © 2016 The Authors.

A hybrid model for coupling kinetic corrections of fusion reactivity to hydrodynamic implosion simulations

NASA Astrophysics Data System (ADS)

Tang, Xian-Zhu; McDevitt, C. J.; Guo, Zehua; Berk, H. L.

2014-03-01

Inertial confinement fusion requires an imploded target in which a central hot spot is surrounded by a cold and dense pusher. The hot spot/pusher interface can take complicated shape in three dimensions due to hydrodynamic mix. It is also a transition region where the Knudsen and inverse Knudsen layer effect can significantly modify the fusion reactivity in comparison with the commonly used value evaluated with background Maxwellians. Here, we describe a hybrid model that couples the kinetic correction of fusion reactivity to global hydrodynamic implosion simulations. The key ingredient is a non-perturbative treatment of the tail ions in the interface region where the Gamow ion Knudsen number approaches or surpasses order unity. The accuracy of the coupling scheme is controlled by the precise criteria for matching the non-perturbative kinetic model to perturbative solutions in both configuration space and velocity space.

Perturbing Hele-Shaw flow with a small gap gradient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhao, H.; Casademunt, J.; Yeung, C.

1992-02-15

A controlled perturbation is introduced into the Saffman-Taylor flow problem by adding a gradient to the gap of a Hele-Shaw cell. The stability of the single-finger steady state was found to be strongly affected by such a perturbation. Compared with patterns in a standard Hele-Shaw cell, the single Saffman-Taylor finger was stabilized or destabilized according to the sign of the gap gradient. While a linear stability analysis shows that this perturbation should have a negligible effect on the early-stage pattern formation, the experimental data indicate that the characteristic length for the initial breakup of a flat interface has been changedmore » by the perturbation.« less

Interface-Driven Phenomena in Solids: Thermodynamics, Kinetics and Chemistry

DOE PAGES

Abdeljawad, Fadi; Foiles, Stephen M.

2016-05-04

The study of materials interfaces dates back over a century. In solid systems and from an engineering perspective, free surfaces and internal (grain and/or phase) boundaries influence a wide range of properties, such as thermal, electrical and optical transport, and mechanical ones. The properties and the role of interfaces has been discussed extensively in various reviews such as by Sutton and Balluffi. As the characteristic feature size of a materials system (i.e., grain size) is decreased to the nanometer scale, interface-driven physics is expected to dominate due to the increased density of such planar defects. Moreover, interfacial attributes, thermodynamics, andmore » mobility play a key role in phase transformations, such as solidification dynamics and structural transitions in solids, and in homogenization and microstructural evolution processes, such as grain growth, coarsening, and recrystallization. In summary, the set of articles published in this special topic titled: “Interface-Driven Phenomena in Solids: Thermodynamics, Kinetics and Chemistry” covers topics related to microstructure evolution, segregation/adsorption phenomena and interface interactions with other materials defects.« less

Interface-Driven Phenomena in Solids: Thermodynamics, Kinetics and Chemistry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Abdeljawad, Fadi; Foiles, Stephen M.

The study of materials interfaces dates back over a century. In solid systems and from an engineering perspective, free surfaces and internal (grain and/or phase) boundaries influence a wide range of properties, such as thermal, electrical and optical transport, and mechanical ones. The properties and the role of interfaces has been discussed extensively in various reviews such as by Sutton and Balluffi. As the characteristic feature size of a materials system (i.e., grain size) is decreased to the nanometer scale, interface-driven physics is expected to dominate due to the increased density of such planar defects. Moreover, interfacial attributes, thermodynamics, andmore » mobility play a key role in phase transformations, such as solidification dynamics and structural transitions in solids, and in homogenization and microstructural evolution processes, such as grain growth, coarsening, and recrystallization. In summary, the set of articles published in this special topic titled: “Interface-Driven Phenomena in Solids: Thermodynamics, Kinetics and Chemistry” covers topics related to microstructure evolution, segregation/adsorption phenomena and interface interactions with other materials defects.« less

Scalar perturbation in symmetric Lee-Wick bouncing universe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cho, Inyong; Kwon, O-Kab, E-mail: iycho@seoultech.ac.kr, E-mail: okab@skku.edu

2011-11-01

We investigate the scalar perturbation in the Lee-Wick bouncing universe driven by an ordinary scalar field plus a ghost field. We consider only a symmetric evolution of the universe and the scalar fields about the bouncing point. The gauge invariant Sasaki-Mukhanov variable is numerically solved in the spatially flat gauge. We find a new form of the initial perturbation growing during the contracting phase. After the bouncing, this growing mode stabilizes to a constant mode which is responsible for the late-time power spectrum.

Electrified Flow in Slender V-Groove Microchannels: Generalized Stability of Steady State Configurations

NASA Astrophysics Data System (ADS)

Markeviciute, Vilda; White, Nicholas; Troian, Sandra

2017-11-01

Although spontaneous capillary flow can be an especially rapid process in slender open microchannels resembling V-grooves, enhanced flow control is possible through implementation of electric field distributions which generate opposing electrohydrodynamic pressures along the air/liquid interface to modulate the capillary pressures. Important fundamental work by Romero and Yost (1996) and Weislogel(1996) has elucidated the behavior of Newtonian films in slender V-grooves driven to flow solely by the streamwise change in capillary pressure due to the change in radius of curvature of the circular arc describing the interface of wetting or non-wetting fluids. Here we augment the Romero and Yost model with inclusion of Maxwell stresses for perfectly conducting wetting films and examine which electric field distributions allow formation of steady state film shapes for various inlet and outlet boundary conditions. We investigate the stability of these steady solutions to small perturbations in film thickness using a generalized stability analysis. These results reveal how the ratio of Maxwell to capillary stresses influences the degree of linearized transient growth or decay for thin films confined to flow within an open V-groove. Funding from the 2017 Caltech Summer Undergraduate Research Fellowship Program (Markeviciute) as well as a 2017 NASA Space Technology Research Fellowship (White) is gratefully acknowledged.

Magnetically-Driven Convergent Instability Growth platform on Z.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Knapp, Patrick; Mattsson, Thomas; Martin, Matthew

Hydrodynamic instability growth is a fundamentally limiting process in many applications. In High Energy Density Physics (HEDP) systems such as inertial confinement fusion implosions and stellar explosions, hydro instabilities can dominate the evolution of the object and largely determine the final state achievable. Of particular interest is the process by which instabilities cause perturbations at a density or material interface to grow nonlinearly, introducing vorticity and eventually causing the two species to mix across the interface. Although quantifying instabilities has been the subject of many investigations in planar geometry, few have been done in converging geometry. During FY17, the teammore » executed six convergent geometry instability experiments. Based on earlier results, the platform was redesigned and improved with respect to load centering at installation making the installation reproducible and development of a new 7.2 keV, Co He-a backlighter system to better penetrate the liner. Together, the improvements yielded significantly improved experimental results. The results in FY17 demonstrate the viability of using experiments on Z to quantify instability growth in cylindrically convergent geometry. Going forward, we will continue the partnership with staff and management at LANL to analyze the past experiments, compare to hydrodynamics growth models, and design future experiments.« less

Periodic perturbations with rotational symmetry of planar systems driven by a central force

NASA Astrophysics Data System (ADS)

Fonda, Alessandro; Gallo, Anna Chiara

2018-06-01

We consider periodic perturbations of a central force field having a rotational symmetry, and prove the existence of nearly circular periodic orbits. We thus generalize, in the planar case, some previous bifurcation results obtained by Ambrosetti and Coti Zelati in [1]. Our results apply, in particular, to the classical Kepler problem.

Strength and viscosity effects on perturbed shock front stability in metals

DOE PAGES

Opie, Saul; Loomis, Eric Nicholas; Peralta, Pedro; ...

2017-05-09

Here, computational modeling and experimental measurements on metal samples subject to a laser-driven, ablative Richtmyer-Meshkov instability showed differences between viscosity and strength effects. In particular, numerical and analytical solutions, coupled with measurements of fed-through perturbations, generated by perturbed shock fronts onto initially flat surfaces, show promise as a validation method for models of deviatoric response in the post shocked material. Analysis shows that measurements of shock perturbation amplitudes at low sample thickness-to-wavelength ratios are not enough to differentiate between strength and viscosity effects, but that surface displacement data of the fed-through fed-thru perturbations appears to resolve the ambiguity. Additionally, analyticalmore » and numerical results show shock front perturbation evolution dependence on initial perturbation amplitude and wavelength is significantly different in viscous and materials with strength, suggesting simple experimental geometry changes should provide data supporting one model or the other.« less

Phase-locking dynamics in optoelectronic oscillator

NASA Astrophysics Data System (ADS)

Banerjee, Abhijit; Sarkar, Jayjeet; Das, NikhilRanjan; Biswas, Baidyanath

2018-05-01

This paper analyzes the phase-locking phenomenon in single-loop optoelectronic microwave oscillators considering weak and strong radio frequency (RF) signal injection. The analyses are made in terms of the lock-range, beat frequency and the spectral components of the unlocked-driven oscillator. The influence of RF injection signal on the frequency pulling of the unlocked-driven optoelectronic oscillator (OEO) is also studied. An approximate expression for the amplitude perturbation of the oscillator is derived and the influence of amplitude perturbation on the phase-locking dynamics is studied. It is shown that the analysis clearly reveals the phase-locking phenomenon and the associated frequency pulling mechanism starting from the fast-beat state through the quasi-locked state to the locked state of the pulled OEO. It is found that the unlocked-driven OEO output signal has a very non-symmetrical sideband distribution about the carrier. The simulation results are also given in partial support to the conclusions of the analysis.

CAST: a new program package for the accurate characterization of large and flexible molecular systems.

PubMed

Grebner, Christoph; Becker, Johannes; Weber, Daniel; Bellinger, Daniel; Tafipolski, Maxim; Brückner, Charlotte; Engels, Bernd

2014-09-15

The presented program package, Conformational Analysis and Search Tool (CAST) allows the accurate treatment of large and flexible (macro) molecular systems. For the determination of thermally accessible minima CAST offers the newly developed TabuSearch algorithm, but algorithms such as Monte Carlo (MC), MC with minimization, and molecular dynamics are implemented as well. For the determination of reaction paths, CAST provides the PathOpt, the Nudge Elastic band, and the umbrella sampling approach. Access to free energies is possible through the free energy perturbation approach. Along with a number of standard force fields, a newly developed symmetry-adapted perturbation theory-based force field is included. Semiempirical computations are possible through DFTB+ and MOPAC interfaces. For calculations based on density functional theory, a Message Passing Interface (MPI) interface to the Graphics Processing Unit (GPU)-accelerated TeraChem program is available. The program is available on request. Copyright © 2014 Wiley Periodicals, Inc.

Patterns of variability in steady- and non steady-state Ross Ice Shelf flow

NASA Astrophysics Data System (ADS)

Campbell, A. J.; Hulbe, C. L.; Scambos, T. A.; Klinger, M. J.; Lee, C. K.

2016-12-01

Ice shelves are gateways through which climate change can be transmitted from the ocean or atmosphere to a grounded ice sheet. It is thus important to separate patterns of ice shelf change driven internally (from the ice sheet) and patterns driven externally (by the ocean or atmosphere) so that modern observations can be viewed in an appropriate context. Here, we focus on the Ross Ice Shelf (RIS), a major component of the West Antarctic Ice Sheet system and a feature known to experience variable ice flux from tributary ice streams and glaciers, for example, ice stream stagnation and glacier surges. We perturb a model of the Ross Ice Shelf with periodic influx variations, ice rise and ice plain grounding events, and iceberg calving in order to generate transients in the ice shelf flow and thickness. Characteristic patterns associated with those perturbations are identified using empirical orthogonal functions (EOFs). The leading EOFs reveal shelf-wide pattern of response to local perturbations that can be interpreted in terms of coupled mass and momentum balance. For example, speed changes on Byrd Glacier cause both thinning and thickening in a broad region that extends to Roosevelt Island. We calculate decay times at various locations for various perturbations and find that mutli-decadal to century time scales are typical. Unique identification of responses to particular forcings may thus be difficlult to achieve and flow divergence cannot be assumed to be constant when interpreting observed changes in ice thickness. In reality, perturbations to the ice shelf do not occur individually, rather the ice shelf contains a history of boundary perturbations. To explore the degree individual perturbations are seperable from their ensemble, EOFs from individual events are combined in pairs and compared against experiments with the same periodic perturbations pairs. Residuals between these EOFs reveal the degree interaction between between disctinct perturbations.

Thermal modulation voltammetry with laser heating at an aqueous|nitrobenzene solution microinterface: determination of the standard entropy changes of transfer for tetraalkylammonium ions.

PubMed

Hinoue, Teruo; Ikeda, Eiji; Watariguchi, Shigeru; Kibune, Yasuyuki

2007-01-01

Thermal modulation voltammetry (TMV) with laser heating was successfully performed at an aqueous|nitrobenzene (NB) solution microinterface, by taking advantage of the fact that laser light with a wavelength of 325.0 nm is optically transparent to the aqueous solution but opaque to the NB solution. When the laser beam impinges upon the interface from the aqueous solution side, a temperature is raised around the interface through the thermal diffusion subsequent to the light-to-heat conversion following the optical absorption by the NB solution near the interface. Based on such a principle, we achieved a fluctuating temperature perturbation around the interface for TMV by periodically irradiating the interface with the laser beam. On the other hand, the fluctuating temperature perturbation has influence on currents for transfer of an ion across the interface to produce fluctuating currents synchronized with the perturbation through temperature coefficients of several variables concerning the transfer, such as the standard transfer potential and the diffusion coefficient of the ion. Consequently, TMV has the possibility of providing information about the standard entropy change of transfer corresponding to a temperature coefficient of the standard transfer potential and a temperature coefficient of the diffusion coefficient. In this work, the aqueous|NB solution interface of 30 microm in diameter was irradiated with the laser beam at 10 Hz, and the currents synchronized with the periodical irradiation were recorded as a function of the potential difference across the interface in order to construct a TM voltammogram. TM voltammograms were measured for transfer of tetramethylammonium, tetraethylammonium, tetrapropylammonium, and tetra-n-butylammonium ions from the aqueous solution to the NB solution, and the standard entropy change of transfer was determined for each ion, according to an analytical procedure based on a mathematical expression of the TM voltammogram. Comparison of the values obtained in this work with the literature values has proved that TMV with laser heating is available for the determination of the standard entropy change of transfer for an ion.

Weakly nonlinear incompressible Rayleigh-Taylor instability growth at cylindrically convergent interfaces

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, L. F.; He, X. T.; HEDPS, Center for Applied Physics and Technology, Peking University, Beijing 100871

2013-04-15

A weakly nonlinear (WN) model has been developed for the incompressible Rayleigh-Taylor instability (RTI) in cylindrical geometry. The transition from linear to nonlinear growth is analytically investigated via a third-order solutions for the cylindrical RTI initiated by a single-mode velocity perturbation. The third-order solutions can depict the early stage of the interface asymmetry due to the bubble-spike formation, as well as the saturation of the linear (exponential) growth of the fundamental mode. The WN results in planar RTI [Wang et al., Phys. Plasmas 19, 112706 (2012)] are recovered in the limit of high-mode number perturbations. The difference between the WNmore » growth of the RTI in cylindrical geometry and in planar geometry is discussed. It is found that the interface of the inward (outward) development spike/bubble is extruded (stretched) by the additional inertial force in cylindrical geometry compared with that in planar geometry. For interfaces with small density ratios, the inward growth bubble can grow fast than the outward growth spike in cylindrical RTI. Moreover, a reduced formula is proposed to describe the WN growth of the RTI in cylindrical geometry with an acceptable precision, especially for small-amplitude perturbations. Using the reduced formula, the nonlinear saturation amplitude of the fundamental mode and the phases of the Fourier harmonics are studied. Thus, it should be included in applications where converging geometry effects play an important role, such as the supernova explosions and inertial confinement fusion implosions.« less

Vibroacoustic response of structures and perturbation Reynolds stress near structure-turbulence interface

NASA Technical Reports Server (NTRS)

Maekawa, S.; Lin, Y. K.

1977-01-01

The interaction between a turbulent flow and certain types of structures which respond to its excitation is investigated. One-dimensional models were used to develop the basic ideas applied to a second model resembling the fuselage construction of an aircraft. In the two-dimensional case a simple membrane, with a small random variation in the membrane tension, was used. A decaying turbulence was constructed by superposing infinitely many components, each of which is convected as a frozen pattern at a different velocity. Structure-turbulence interaction results are presented in terms of the spectral densities of the structural response and the perturbation Reynolds stress in the fluid at the vicinity of the interface.

Wavelet analysis methods for radiography of multidimensional growth of planar mixing layers

DOE PAGES

Merritt, Elizabeth Catherine; Doss, Forrest William

2016-07-06

The counter-propagating shear campaign is examining instability growth and its transition to turbulence in the high-energy-density physics regime using a laser-driven counter-propagating flow platform. In these experiments, we observe consistent complex break-up of and structure growth in a tracer layer placed at the shear flow interface during the instability growth phase. We present a wavelet-transform based analysis technique capable of characterizing the scale- and directionality-resolved average intensity perturbations in static radiographs of the experiment. This technique uses the complete spatial information available in each radiograph to describe the structure evolution. We designed this analysis technique to generate a two-dimensional powermore » spectrum for each radiograph from which we can recover information about structure widths, amplitudes, and orientations. Lastly, the evolution of the distribution of power in the spectra for an experimental series is a potential metric for quantifying the structure size evolution as well as a system’s evolution towards isotropy.« less

Three- and Two- Dimensional Simulations of Re-shock Experiments at High Energy Densities at the National Ignition Facility

NASA Astrophysics Data System (ADS)

Wang, Ping; Raman, Kumar; MacLaren, Stephan; Huntington, Channing; Nagel, Sabrina

2016-10-01

We present simulations of recent high-energy-density (HED) re-shock experiments on the National Ignition Facility (NIF). The experiments study the Rayleigh-Taylor (RT) and Richtmyer-Meshkov (RM) instability growth that occurs after successive shocks transit a sinusoidally-perturbed interface between materials of different densities. The shock tube is driven at one or both ends using indirect-drive laser cavities or hohlraums. X-ray area-backlit imaging is used to visualize the growth at different times. Our simulations are done with the three-dimensional, radiation hydrodynamics code ARES, developed at LLNL. We show the instabilitygrowth rate, inferred from the experimental radiographs, agrees well with our 2D and 3D simulations. We also discuss some 3D geometrical effects, suggested by our simulations, which could deteriorate the images at late times, unless properly accounted for in the experiment design. Work supported by U.S. Department of Energy under Contract DE- AC52-06NA27279. LLNL-ABS-680789.

A Riccati model for Denmark Strait overflow variability

NASA Astrophysics Data System (ADS)

Käse, R. H.

2006-10-01

A controlled volume box model of the western basins of the Nordic Seas for water denser than 1027.8 kg m-3 is constructed, where accumulation in volume ($\\frac{dV}{dt) is driven by net imbalances between prescribed net inflow from the northern, eastern and top boundaries (Qs) and hydraulically limited outflow through the Denmark Strait. The resulting Riccati equation is solved analytically for filling and flushing experiments with constant Qs and numerically for stochastic forcing Qs(t). For small perturbations to Qs with white noise spectrum, the overflow response is red noise with a time scale between 5 and 15 years depending on the mean interface height and area. For Qs proportional to the NAO index, the overflow is positively correlated with the NAO. A 140 years integration reveals variations in the overflow between 2.5 Sv in the 1970s and a maximum of 4 Sv in the 1990s. Hydraulic transport calculations from hydrographic data north of Iceland show good agreement with the model hindcast.

Wavelet analysis methods for radiography of multidimensional growth of planar mixing layers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Merritt, E. C., E-mail: emerritt@lanl.gov; Doss, F. W.

2016-07-15

The counter-propagating shear campaign is examining instability growth and its transition to turbulence in the high-energy-density physics regime using a laser-driven counter-propagating flow platform. In these experiments, we observe consistent complex break-up of and structure growth in a tracer layer placed at the shear flow interface during the instability growth phase. We present a wavelet-transform based analysis technique capable of characterizing the scale- and directionality-resolved average intensity perturbations in static radiographs of the experiment. This technique uses the complete spatial information available in each radiograph to describe the structure evolution. We designed this analysis technique to generate a two-dimensional powermore » spectrum for each radiograph from which we can recover information about structure widths, amplitudes, and orientations. The evolution of the distribution of power in the spectra for an experimental series is a potential metric for quantifying the structure size evolution as well as a system’s evolution towards isotropy.« less

Formation of Singularities at the Interface of Liquid Dielectrics in a Horizontal Electric Field in the Presence of Tangential Velocity Discontinuity

NASA Astrophysics Data System (ADS)

Zubarev, N. M.; Kochurin, E. A.

2018-03-01

Nonlinear dynamics of the interface of dielectric liquids under the conditions of suppression of the Kelvin-Helmholz instability by a tangential electric field has been investigated. Two broad classes of exact analytical solutions to the equations of motion describing the evolution of spatially localized and periodic interface perturbations have been found. Both classes of solutions tend to the formation of strong singularities: interface discontinuities with formally infinite amplitudes. The discontinuity sign is determined by the sign of liquid velocity jump at the interface.

Sensitivity analysis of reactive ecological dynamics.

PubMed

Verdy, Ariane; Caswell, Hal

2008-08-01

Ecological systems with asymptotically stable equilibria may exhibit significant transient dynamics following perturbations. In some cases, these transient dynamics include the possibility of excursions away from the equilibrium before the eventual return; systems that exhibit such amplification of perturbations are called reactive. Reactivity is a common property of ecological systems, and the amplification can be large and long-lasting. The transient response of a reactive ecosystem depends on the parameters of the underlying model. To investigate this dependence, we develop sensitivity analyses for indices of transient dynamics (reactivity, the amplification envelope, and the optimal perturbation) in both continuous- and discrete-time models written in matrix form. The sensitivity calculations require expressions, some of them new, for the derivatives of equilibria, eigenvalues, singular values, and singular vectors, obtained using matrix calculus. Sensitivity analysis provides a quantitative framework for investigating the mechanisms leading to transient growth. We apply the methodology to a predator-prey model and a size-structured food web model. The results suggest predator-driven and prey-driven mechanisms for transient amplification resulting from multispecies interactions.

Pathophysiological condition changes the conformation of a flexible FBG-related protein, switching it from pathogen-recognition to host-interaction.

PubMed

Zhang, Jing; Yang, Lifeng; Anand, Ganesh Srinivasan; Ho, Bow; Ding, Jeak Ling

2011-10-01

Although homeostatic disturbance of the blood pH and calcium in the vicinity of tissue injury/malignancy/local infection seems subtle, it can cause substantial pathophysiological consequences, a phenomenon which has remained largely unexplored. The fibrinogen-related proteins (FREPs) containing fibrinogen-like domain (FBG) represent a conserved protein family with a common calcium-binding region, implying the presence of elements responsive to physiological perturbation. Here, we studied the molecular interaction between a representative FREP, the M-ficolin, and an acute phase blood protein, the C-reactive protein (CRP), both of which are known to trigger and control seminal pathways in infection and injury. Using hydrogen-deuterium exchange mass spectrometry, we showed that the C-terminal region of M-ficolin FBG underwent dramatic conformational change upon pH and calcium perturbations. Biochemical and biophysical assays showed that under defined pathophysiological condition (pH 6.5, 2.0 mM calcium), the FBG:CRP interaction occurred more strongly compared to that under physiological condition (pH 7.4, 2.5 mM calcium). We identified the binding interface between CRP and FBG, locating it to the pH- and calcium-sensitive C-terminal region of FBG. By site-directed mutagenesis, we determined H284 in the N-acetylglucosamine (GlcNAc)-binding pocket of the FBG, to be the critical CRP-binding residue. This conformational switch involving H284, explains how the pathophysiologically-driven FBG:CRP interaction diverts the M-ficolin away from GlcNAc/pathogen-recognition to host protein-protein interaction, thus enabling the host to regain homeostatic control. Our elucidation of the binding interface at the flexible FBG domain provides insights into the bioactive centre of the M-ficolin, and possibly other FREPs, which might aid future development of immunomodulators. Copyright © 2011 Elsevier Masson SAS. All rights reserved.

A New Approach to the Visual Rendering of Mantle Tomography

NASA Astrophysics Data System (ADS)

Holtzman, B. K.; Pratt, M. J.; Turk, M.; Hannasch, D. A.

2016-12-01

Visualization of mantle tomographic models requires a range of subjective aesthetic decisions that are often made subconsciously or unarticulated by authors. Many of these decisions affect the interpretations of the model, and therefore should be articulated and understood. In 2D these decisions are manifest in the choice of colormap, including the data values associated with the neutral/transitional colorband, as well as the correspondence between the extrema in the colormap and the parameters of the extrema. For example, we generally choose warm color signifying slow- and cool colors signifying fast velocities (or perturbations), but where is the transition, and the color gradients from transition to extrema? In 3D, volumes are generally rendered by choosing an isosurface of a velocity perturbation (relative to a model at each depth) and coloring it slow to fast. The choice of isosurface is arbitrary or guided by a researcher's intuition, again strongly affecting (or driven by) the interpretation. Here, we present a different approach to 3-D rendering of tomography models, using true volumetric rendering with "yt", a python package for visualization and analysis of data. In our approach, we do not use isosurfaces; instead, we render the extrema in the tomographic model as the most opaque, with an opacity function that touches zero (totally transparent) at dynamically selected values, or at the average value at each depth. The intent is that the most robust aspects of the model are visually clear, and the visualization emphasizes the nature of the interfaces between regions as well as the form of distinct mantle regions. Much of the current scientific discussion in upper mantle tomography focuses on the nature of interfaces, so we will demonstrate how decisions in the definition of the transparent regions influence interpretation of tomographic models. Our aim is to develop a visual language for tomographic visualization that can help focus geodynamic questions.

Oscillations of a standing shock wave generated by the Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Mikaelian, Karnig O.

2016-07-01

In a typical Richtmyer-Meshkov experiment a fast moving flat shock strikes a stationary perturbed interface between fluids A and B creating a transmitted and a reflected shock, both of which are perturbed. We propose shock tube experiments in which the reflected shock is stationary in the laboratory. Such a standing perturbed shock undergoes well-known damped oscillations. We present the conditions required for producing such a standing shock wave, which greatly facilitates the measurement of the oscillations and their rate of damping. We define a critical density ratio Rcritical, in terms of the adiabatic indices of the two fluids, and a critical Mach number Mscritical of the incident shock wave, which produces a standing reflected wave. If the initial density ratio R of the two fluids is less than Rcritical then a standing shock wave is possible at Ms=Mscritical . Otherwise a standing shock is not possible and the reflected wave always moves in the direction opposite the incident shock. Examples are given for present-day operating shock tubes with sinusoidal or inclined interfaces. We consider the effect of viscosity, which affects the damping rate of the oscillations. We point out that nonlinear bubble and spike amplitudes depend relatively weakly on the viscosity of the fluids and that the interface area is a better diagnostic.

A Monthly Water-Balance Model Driven By a Graphical User Interface

USGS Publications Warehouse

McCabe, Gregory J.; Markstrom, Steven L.

2007-01-01

This report describes a monthly water-balance model driven by a graphical user interface, referred to as the Thornthwaite monthly water-balance program. Computations of monthly water-balance components of the hydrologic cycle are made for a specified location. The program can be used as a research tool, an assessment tool, and a tool for classroom instruction.

Stability of Electrodeposition at Solid-Solid Interfaces and Implications for Metal Anodes

NASA Astrophysics Data System (ADS)

Ahmad, Zeeshan; Viswanathan, Venkatasubramanian

2017-08-01

We generalize the conditions for stable electrodeposition at isotropic solid-solid interfaces using a kinetic model which incorporates the effects of stresses and surface tension at the interface. We develop a stability diagram that shows two regimes of stability: a previously known pressure-driven mechanism and a new density-driven stability mechanism that is governed by the relative density of metal in the two phases. We show that inorganic solids and solid polymers generally do not lead to stable electrodeposition, and provide design guidelines for achieving stable electrodeposition.

Mathematical modeling of sustainability of porous Al2O3 growth during two-stage anodization process

NASA Astrophysics Data System (ADS)

Aryslanova, Elizaveta M.; Alfimov, Anton V.; Chivilikhin, Sergey A.

2015-06-01

Currently, due to the development of nanotechnology and metamaterials, it has become important to obtain regular nanoporous structures with different parameters, such as porous anodic alumina films that are used for synthesis of various nanocomposites. In this work we consider the motion of the interfaces between electrolyte and alumina layers, and between alumina and aluminum layers. We also took into account the dynamics of moving boundaries and the change of small perturbations of these boundaries. Each area under Laplace's equation is solved for the potential of the electric field. The growth of porous alumina is described with the theory of small perturbations. Small perturbations of the interface are considered, which lead to small changes in potential and current in the boundaries. As a result of the developed model we obtained the minimum distance between centers of aluminum oxide pores in the beginning of anodizing process and the wavelength of porous structure irregularities.

A stable high-order perturbation of surfaces method for numerical simulation of diffraction problems in triply layered media

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hong, Youngjoon, E-mail: hongy@uic.edu; Nicholls, David P., E-mail: davidn@uic.edu

The accurate numerical simulation of linear waves interacting with periodic layered media is a crucial capability in engineering applications. In this contribution we study the stable and high-order accurate numerical simulation of the interaction of linear, time-harmonic waves with a periodic, triply layered medium with irregular interfaces. In contrast with volumetric approaches, High-Order Perturbation of Surfaces (HOPS) algorithms are inexpensive interfacial methods which rapidly and recursively estimate scattering returns by perturbation of the interface shape. In comparison with Boundary Integral/Element Methods, the stable HOPS algorithm we describe here does not require specialized quadrature rules, periodization strategies, or the solution ofmore » dense non-symmetric positive definite linear systems. In addition, the algorithm is provably stable as opposed to other classical HOPS approaches. With numerical experiments we show the remarkable efficiency, fidelity, and accuracy one can achieve with an implementation of this algorithm.« less

Mitigation of Alfvén activity in a tokamak by externally applied static 3D fields.

PubMed

Bortolon, A; Heidbrink, W W; Kramer, G J; Park, J-K; Fredrickson, E D; Lore, J D; Podestà, M

2013-06-28

The application of static magnetic field perturbations to a tokamak plasma is observed to alter the dynamics of high-frequency bursting Alfvén modes that are driven unstable by energetic ions. In response to perturbations with an amplitude of δB/B∼0.01 at the plasma boundary, the mode amplitude is reduced, the bursting frequency is increased, and the frequency chirp is smaller. For modes of weaker bursting character, the magnetic perturbation induces a temporary transition to a saturated continuous mode. Calculations of the perturbed distribution function indicate that the 3D perturbation affects the orbits of fast ions that resonate with the bursting modes. The experimental evidence represents an important demonstration of the possibility of controlling fast-ion instabilities through "phase-space engineering" of the fast-ion distribution function, by means of externally applied perturbation fields.

The User Interface: How Does Your Product Look and Feel?

ERIC Educational Resources Information Center

Strukhoff, Roger

1987-01-01

Discusses the importance of user cordial interfaces to the successful marketing of optical data disk products, and describes features of several online systems. The topics discussed include full text searching, indexed searching, menu driven interfaces, natural language interfaces, computer graphics, and possible future developments. (CLB)

Fill-Tube-Induced Mass Perturbations on X-Ray-Driven, Ignition-Scale, Inertial-Confinement-Fusion Capsule Shells and the Implications for Ignition Experiments

DOE PAGES

Bennett, G. R.; Herrmann, M. C.; Edwards, M. J.; ...

2007-11-13

We present on the first inertial-confinement-fusion ignition facility, the target capsule will be DT filled through a long, narrow tube inserted into the shell. μg-scale shell perturbations Δm' arising from multiple, 10–50 μm-diameter, hollow SiO 2 tubes on x-ray-driven, ignition-scale, 1-mg capsules have been measured on a subignition device. Finally, simulations compare well with observation, whence it is corroborated that Δm' arises from early x-ray shadowing by the tube rather than tube mass coupling to the shell, and inferred that 10–20 μm tubes will negligibly affect fusion yield on a full-ignition facility.

Effect of bromine-dopant on radiation-driven Rayleigh-Taylor instability in plastic foil

NASA Astrophysics Data System (ADS)

Xu, Binbin; Ma, Yanyun; Yang, Xiaohu; Tang, Wenhui; Ge, Zheyi; Zhao, Yuan; Ke, Yanzhao; Kawata, Shiego

2017-10-01

Effects of bromine (Br) dopant on the growth of radiation-driven ablative Rayleigh-Taylor instability (RTI) in plastic foils are studied by radiation hydrodynamics simulations and theoretical analysis. It is found that the Br-dopant in plastic foil reduces the seed of ablative RTI. The main reasons of the reduction are attributed to the smaller oscillation amplitude of ablative Richtmyer-Meshkov instability (RMI) induced by the smaller post-shock sound speed, and the smaller oscillation frequency of ablative RMI induced by the smaller ablation velocity and blow-off plasma velocity. The Br-dopant also decreases the linear growth rate of ablative RTI due to the smaller acceleration. Treating the perturbation growth as a function of foil’s displacement, the perturbation growth would increase in Br-doped foil at the phase of ablative RTI, which is attributed to the decrease of the ablation velocity and the density gradient scale length. The results are helpful for further understanding the influence of high-Z dopant on the radiation-driven ablative RTI.

Linear morphological stability analysis of the solid-liquid interface in rapidsolidification of a binary system

NASA Astrophysics Data System (ADS)

Galenko, P. K.; Danilov, D. A.

2004-05-01

The interface stability against small perturbations of the planar solid-liquid interface is considered analytically in linear approximation. Following the analytical procedure of Trivedi and Kurz [

Cortical geometry may influence placement of interface between Par protein domains in early Caenorhabditis elegans embryos.

PubMed

Dawes, Adriana T; Iron, David

2013-09-21

During polarization, proteins and other polarity determinants segregate to the opposite ends of the cell (the poles) creating biochemically and dynamically distinct regions. Embryos of the nematode worm Caenorhabditis elegans (C. elegans) polarize shortly after fertilization, creating distinct regions of Par protein family members. These regions are maintained through to first cleavage when the embryo divides along the plane specified by the interface between regions, creating daughter cells with different protein content. In wild type single cell embryos the interface between these Par protein regions is reliably positioned at approximately 60% egg length, however, it is not known what mechanisms are responsible for specifying the position of the interface. In this investigation, we use two mathematical models to investigate the movement and positioning of the interface: a biologically based reaction-diffusion model of Par protein dynamics, and the analytically tractable perturbed Allen-Cahn equation. When we numerically simulate the models on a static 2D domain with constant thickness, both models exhibit a persistently moving interface that specifies the boundary between distinct regions. When we modify the simulation domain geometry, movement halts and the interface is stably positioned where the domain thickness increases. Using asymptotic analysis with the perturbed Allen-Cahn equation, we show that interface movement depends explicitly on domain geometry. Using a combination of analytic and numeric techniques, we demonstrate that domain geometry, a historically overlooked aspect of cellular simulations, may play a significant role in spatial protein patterning during polarization. Copyright © 2013 Elsevier Ltd. All rights reserved.

Effect of alignment perturbations in a trans-tibial prosthesis user: A pilot study.

PubMed

Courtney, Anna; Orendurff, Michael S; Buis, Arjan

2016-04-01

A recurring complication in trans-tibial prosthetic limb users is "poor socket fit" with painful residuum-socket interfaces, a consequence of excess pressure. This is due to both poor socket fit and poor socket alignment; however, the interaction of these factors has not been quantified. Through evaluation of kinetic data this study aimed to articulate an interaction uniting socket design, alignment and interface pressures. The results will help to refine future studies and will hopefully help determine whether sockets can be designed, fitted and aligned to maximize mobility whilst minimizing injurious forces. Interface pressures were recorded throughout ambulation in one user with "optimal (reference) alignment" followed by 5 malalignments in a patellar tendon-bearing and a hydrocast socket. Marked differences in pressure distribution were discovered when equating the patellar tendon-bearing against the hydrocast socket and when comparing interface pressures from reference with offset alignment. Patellar tendon-bearing sockets were found to be more sensitive to alignment perturbations than hydrocast sockets. A complex interaction was found, with the most prominent finding demonstrating the requisite for attainment of optimal alignment: a translational alignment error of 10 mm can increase maximum peak pressures by 227% (mean 17.5%). Refinements for future trials are described and the necessity for future research into socket design, alignment and interface pressures has been estabilished.

Effects of Time-Dependent Inflow Perturbations on Turbulent Flow in a Street Canyon

NASA Astrophysics Data System (ADS)

Duan, G.; Ngan, K.

2017-12-01

Urban flow and turbulence are driven by atmospheric flows with larger horizontal scales. Since building-resolving computational fluid dynamics models typically employ steady Dirichlet boundary conditions or forcing, the accuracy of numerical simulations may be limited by the neglect of perturbations. We investigate the sensitivity of flow within a unit-aspect-ratio street canyon to time-dependent perturbations near the inflow boundary. Using large-eddy simulation, time-periodic perturbations to the streamwise velocity component are incorporated via the nudging technique. Spatial averages of pointwise differences between unperturbed and perturbed velocity fields (i.e., the error kinetic energy) show a clear dependence on the perturbation period, though spatial structures are largely insensitive to the time-dependent forcing. The response of the error kinetic energy is maximized for perturbation periods comparable to the time scale of the mean canyon circulation. Frequency spectra indicate that this behaviour arises from a resonance between the inflow forcing and the mean motion around closed streamlines. The robustness of the results is confirmed using perturbations derived from measurements of roof-level wind speed.

From current-driven to neoclassically driven tearing modes.

PubMed

Reimerdes, H; Sauter, O; Goodman, T; Pochelon, A

2002-03-11

In the TCV tokamak, the m/n = 2/1 island is observed in low-density discharges with central electron-cyclotron current drive. The evolution of its width has two distinct growth phases, one of which can be linked to a "conventional" tearing mode driven unstable by the current profile and the other to a neoclassical tearing mode driven by a perturbation of the bootstrap current. The TCV results provide the first clear observation of such a destabilization mechanism and reconcile the theory of conventional and neoclassical tearing modes, which differ only in the dominant driving term.

Deriving Lindblad master equations with Keldysh diagrams: Correlated gain and loss in higher order perturbation theory

NASA Astrophysics Data System (ADS)

Müller, Clemens; Stace, Thomas M.

2017-01-01

Motivated by correlated decay processes producing gain, loss, and lasing in driven semiconductor quantum dots [Phys. Rev. Lett. 113, 036801 (2014), 10.1103/PhysRevLett.113.036801; Science 347, 285 (2015), 10.1126/science.aaa2501; Phys. Rev. Lett. 114, 196802 (2015), 10.1103/PhysRevLett.114.196802], we develop a theoretical technique by using Keldysh diagrammatic perturbation theory to derive a Lindblad master equation that goes beyond the usual second-order perturbation theory. We demonstrate the method on the driven dissipative Rabi model, including terms up to fourth order in the interaction between the qubit and both the resonator and environment. This results in a large class of Lindblad dissipators and associated rates which go beyond the terms that have previously been proposed to describe similar systems. All of the additional terms contribute to the system behavior at the same order of perturbation theory. We then apply these results to analyze the phonon-assisted steady-state gain of a microwave field driving a double quantum dot in a resonator. We show that resonator gain and loss are substantially affected by dephasing-assisted dissipative processes in the quantum-dot system. These additional processes, which go beyond recently proposed polaronic theories, are in good quantitative agreement with experimental observations.

Driven similarity renormalization group: Third-order multireference perturbation theory.

PubMed

Li, Chenyang; Evangelista, Francesco A

2017-03-28

A third-order multireference perturbation theory based on the driven similarity renormalization group (DSRG-MRPT3) approach is presented. The DSRG-MRPT3 method has several appealing features: (a) it is intruder free, (b) it is size consistent, (c) it leads to a non-iterative algorithm with O(N 6 ) scaling, and (d) it includes reference relaxation effects. The DSRG-MRPT3 scheme is benchmarked on the potential energy curves of F 2 , H 2 O 2 , C 2 H 6 , and N 2 along the F-F, O-O, C-C, and N-N bond dissociation coordinates, respectively. The nonparallelism errors of DSRG-MRPT3 are consistent with those of complete active space third-order perturbation theory and multireference configuration interaction with singles and doubles and show significant improvements over those obtained from DSRG second-order multireference perturbation theory. Our efficient implementation of the DSRG-MRPT3 based on factorized electron repulsion integrals enables studies of medium-sized open-shell organic compounds. This point is demonstrated with computations of the singlet-triplet splitting (Δ ST =E T -E S ) of 9,10-anthracyne. At the DSRG-MRPT3 level of theory, our best estimate of the adiabatic Δ ST is 3.9 kcal mol -1 , a value that is within 0.1 kcal mol -1 from multireference coupled cluster results.

Data-free and data-driven spectral perturbations for RANS UQ

NASA Astrophysics Data System (ADS)

Edeling, Wouter; Mishra, Aashwin; Iaccarino, Gianluca

2017-11-01

Despite recent developments in high-fidelity turbulent flow simulations, RANS modeling is still vastly used by industry, due to its inherent low cost. Since accuracy is a concern in RANS modeling, model-form UQ is an essential tool for assessing the impacts of this uncertainty on quantities of interest. Applying the spectral decomposition to the modeled Reynolds-Stress Tensor (RST) allows for the introduction of decoupled perturbations into the baseline intensity (kinetic energy), shape (eigenvalues), and orientation (eigenvectors). This constitutes a natural methodology to evaluate the model form uncertainty associated to different aspects of RST modeling. In a predictive setting, one frequently encounters an absence of any relevant reference data. To make data-free predictions with quantified uncertainty we employ physical bounds to a-priori define maximum spectral perturbations. When propagated, these perturbations yield intervals of engineering utility. High-fidelity data opens up the possibility of inferring a distribution of uncertainty, by means of various data-driven machine-learning techniques. We will demonstrate our framework on a number of flow problems where RANS models are prone to failure. This research was partially supported by the Defense Advanced Research Projects Agency under the Enabling Quantification of Uncertainty in Physical Systems (EQUiPS) project (technical monitor: Dr Fariba Fahroo), and the DOE PSAAP-II program.

Perturbing laser field dependent high harmonic phase modulations

NASA Astrophysics Data System (ADS)

Li, Zhengyan; Kong, Fanqi; Brown, Graham; Hammond, TJ; Ko, Dong-Hyuk; Zhang, Chunmei; Corkum, P. B.

2018-06-01

A perturbing laser pulse modulates and controls the phase of the high harmonic radiation driven by an intense fundamental pulse. Thus, a structured wave front can impress a specific spatial phase onto the generated high harmonic wave front. This modulation procedure leads to all-optical spatial light modulators for VUV or XUV radiation created by high harmonic generation. Here, through theoretical analysis and experiment, we study the correlation between the high harmonic phase modulations and the perturbing laser field amplitude and phase, providing guidelines for practical high harmonic spatial light modulators. In addition, we show that the petahertz optical oscilloscope for measuring electric fields of a perturbing beam is most robust using low order harmonics, far from the cut-off.

Validation of extended magnetohydrodynamic simulations of the HIT-SI3 experiment using the NIMROD code

NASA Astrophysics Data System (ADS)

Morgan, K. D.; Jarboe, T. R.; Hossack, A. C.; Chandra, R. N.; Everson, C. J.

2017-12-01

The HIT-SI3 experiment uses a set of inductively driven helicity injectors to apply a non-axisymmetric current drive on the edge of the plasma, driving an axisymmetric spheromak equilibrium in a central confinement volume. These helicity injectors drive a non-axisymmetric perturbation that oscillates in time, with relative temporal phasing of the injectors modifying the mode structure of the applied perturbation. A set of three experimental discharges with different perturbation spectra are modelled using the NIMROD extended magnetohydrodynamics code, and comparisons are made to both magnetic and fluid measurements. These models successfully capture the bulk dynamics of both the perturbation and the equilibrium, though disagreements related to the pressure gradients experimentally measured exist.

Shock Interaction with a Finite Thickness Two-Gas Interface

NASA Astrophysics Data System (ADS)

Labenski, John; Kim, Yong

2006-03-01

A dual-driver shock tube was used to investigate the growth rate of a finite thickness two-gas interface after shock forcing. One driver was used to create an argon-refrigerant interface as the contact surface behind a weak shock wave. The other driver, at the opposite end of the driven section, generates a stronger shock of Mach 1.1 to 1.3 to force the interface back in front of the detector station. Two schlieren systems record the density fluctuations while light scattering detectors record the density of the refrigerant as a function of position over the interface during both it's initial passage and return. A pair of digital cameras take stereo images of the interface, as mapped out by the tracer particles under illumination by a Q-switched ruby laser. The amount of time that the interface is allowed to travel up the driven section determines the interaction time as a control. Comparisons made between the schlieren signals, light scattering detector outputs, and the images quantify the fingered characteristics of the interface and its growth due to shock forcing. The results show that the interface has a distribution of thicknesses and that the interaction with a shock further broadens the interface.

Symmetry-Driven Atomic Rearrangement at a Brownmillerite-Perovskite Interface

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meyer, Tricia L.; Jeen, Hyoungjeen; Gao, Xiang

2015-12-15

To those investigating new interfacial phenomena, symmetry mismatch is of immense interest. The interfacial and bulk microstructure of the brownmillerite–perovskite interface is probed using detailed transmission electron microscopy. Unique asymmetric displacements of the tetrahedra at the interface are observed, signifying a compensation mechanism for lattice and symmetry mismatch at the interface.

Stability of a chemically active floating disk

NASA Astrophysics Data System (ADS)

Vandadi, Vahid; Jafari Kang, Saeed; Rothstein, Jonathan; Masoud, Hassan

2017-11-01

We theoretically study the translational stability of a chemically active disk located at a flat liquid-gas interface. The initially immobile circular disk uniformly releases an interface-active agent that locally changes the surface tension and is insoluble in the bulk. If left unperturbed, the stationary disk remains motionless as the agent is discharged. Neglecting the inertial effects, we numerically test whether a perturbation in the translational velocity of the disk can lead to its spontaneous and self-sustained motion. Such a perturbation gives rise to an asymmetric distribution of the released factor that could trigger and sustain the Marangoni propulsion of the disk. An implicit Fourier-Chebyshev spectral method is employed to solve the advection-diffusion equation for the concentration of the active agent. The solution, given a linear equation of state for the surface tension, provides the shear stress distribution at the interface. This and the no-slip condition on the wetted surface of the disk are then used at each time step to semi-analytically determine the Stokes flow in the semi-infinite liquid layer. Overall, the findings of our investigation pave the way for pinpointing the conditions under which interface-bound active particles become dynamically unstable.

Linear Stability Analysis of an Acoustically Vaporized Droplet

NASA Astrophysics Data System (ADS)

Siddiqui, Junaid; Qamar, Adnan; Samtaney, Ravi

2015-11-01

Acoustic droplet vaporization (ADV) is a phase transition phenomena of a superheat liquid (Dodecafluoropentane, C5F12) droplet to a gaseous bubble, instigated by a high-intensity acoustic pulse. This approach was first studied in imaging applications, and applicable in several therapeutic areas such as gas embolotherapy, thrombus dissolution, and drug delivery. High-speed imaging and theoretical modeling of ADV has elucidated several physical aspects, ranging from bubble nucleation to its subsequent growth. Surface instabilities are known to exist and considered responsible for evolving bubble shapes (non-spherical growth, bubble splitting and bubble droplet encapsulation). We present a linear stability analysis of the dynamically evolving interfaces of an acoustically vaporized micro-droplet (liquid A) in an infinite pool of a second liquid (liquid B). We propose a thermal ADV model for the base state. The linear analysis utilizes spherical harmonics (Ynm, of degree m and order n) and under various physical assumptions results in a time-dependent ODE of the perturbed interface amplitudes (one at the vapor/liquid A interface and the other at the liquid A/liquid B interface). The perturbation amplitudes are found to grow exponentially and do not depend on m. Supported by KAUST Baseline Research Funds.

Oscillations of a standing shock wave generated by the Richtmyer-Meshkov instability

DOE PAGES

Mikaelian, Karnig O.

2016-07-13

In a typical Richtmyer-Meshkov experiment a fast moving flat shock strikes a stationary perturbed interface between fluids A and B creating a transmitted and a reflected shock, both of which are perturbed. We propose shock tube experiments in which the reflected shock is stationary in the laboratory. Such a standing perturbed shock undergoes well-known damped oscillations. We present the conditions required for producing such a standing shock wave, which greatly facilitates the measurement of the oscillations and their rate of damping. We define a critical density ratio R critical, in terms of the adiabatic indices of the two fluids, andmore » a critical Mach number M critical s of the incident shock wave, which produces a standing reflected wave. If the initial density ratio R of the two fluids is less than R critical then a standing shock wave is possible at M s=M critical s. Otherwise a standing shock is not possible and the reflected wave always moves in the direction opposite the incident shock. Examples are given for present-day operating shock tubes with sinusoidal or inclined interfaces. We consider the effect of viscosity, which affects the damping rate of the oscillations. Furthermore, we point out that nonlinear bubble and spike amplitudes depend relatively weakly on the viscosity of the fluids and that the interface area is a better diagnostic.« less

Explosively driven two-shockwave tools with applications

NASA Astrophysics Data System (ADS)

Buttler, W. T.; Oró, D. M.; Mariam, F. G.; Saunders, A.; Andrews, M. J.; Cherne, F. J.; Hammerberg, J. E.; Hixson, R. S.; Monfared, S. K.; Morris, C.; Olson, R. T.; Preston, D. L.; Stone, J. B.; Terrones, G.; Tupa, D.; Vogan-McNeil, W.

2014-05-01

We present the development of an explosively driven physics tool to generate two mostly uniaxial shockwaves. The tool is being used to extend single shockwave ejecta models to account for a second shockwave a few microseconds later. We explore techniques to vary the amplitude of both the first and second shockwaves, and we apply the tool experimentally at the Los Alamos National Laboratory Proton Radiography (pRad)facility. The tools have been applied to Sn with perturbations of wavelength λ = 550 μm, and various amplitudes that give wavenumber amplitude products of kh in {3/4,1/2,1/4,1/8}, where h is the perturbation amplitude, and k = 2π/λ is the wavenumber. The pRad data suggest the development of a second shock ejecta model based on unstable Richtmyer-Meshkov physics.

Impact of intermediate and high energy nuclear data on the neutronic safety parameters of MYRRHA accelerator driven system

NASA Astrophysics Data System (ADS)

Stankovskiy, Alexey; Çelik, Yurdunaz; Eynde, Gert Van den

2017-09-01

Perturbation of external neutron source can cause significant local power changes transformed into undesired safety-related events in an accelerator driven system. Therefore for the accurate design of MYRRHA sub-critical core it is important to evaluate the uncertainty of power responses caused by the uncertainties in nuclear reaction models describing the particle transport from primary proton energy down to the evaluated nuclear data table range. The calculations with a set of models resulted in quite low uncertainty on the local power caused by significant perturbation of primary neutron yield from proton interactions with lead and bismuth isotopes. The considered accidental event of prescribed proton beam shape loss causes drastic increase in local power but does not practically change the total core thermal power making this effect difficult to detect. In the same time the results demonstrate a correlation between perturbed local power responses in normal operation and misaligned beam conditions indicating that generation of covariance data for proton and neutron induced neutron multiplicities for lead and bismuth isotopes is needed to obtain reliable uncertainties for local power responses.

First-principles approach to calculating energy level alignment at aqueous semiconductor interfaces.

PubMed

Kharche, Neerav; Muckerman, James T; Hybertsen, Mark S

2014-10-24

A first-principles approach is demonstrated for calculating the relationship between an aqueous semiconductor interface structure and energy level alignment. The physical interface structure is sampled using density functional theory based molecular dynamics, yielding the interface electrostatic dipole. The  GW approach from many-body perturbation theory is used to place the electronic band edge energies of the semiconductor relative to the occupied 1b1 energy level in water. The application to the specific cases of nonpolar (101¯0) facets of GaN and ZnO reveals a significant role for the structural motifs at the interface, including the degree of interface water dissociation and the dynamical fluctuations in the interface Zn-O and O-H bond orientations. These effects contribute up to 0.5 eV.

Authigenic Carbonate Fans from Lower Jurassic Marine Shales (Alberta, Canada)

NASA Astrophysics Data System (ADS)

Martindale, R. C.; Them, T. R., II; Gill, B. C.; Knoll, A. H.

2016-12-01

Authigenic aragonite seafloor fans are a common occurrence in Archean and Paleoproterozoic carbonates, as well as Neoproterozoic cap carbonates. Similar carbonate fans are rare in Phanerozoic strata, with the exception of two mass extinction events; during the Permo-Triassic and Triassic-Jurassic boundaries, carbonate fans formed at the sediment-water interface and within the sediment, respectively. These crystal fans have been linked to carbon cycle perturbations at the end of the Permian and Triassic periods driven by rapid flood volcanism. The Early Jurassic Toarcian Ocean Anoxic Event (T-OAE) is also correlated with the emplacement of a large igneous province, but biological consequences were more modest. We have identified broadly comparable fibrous calcite layers (2-10 cm thick) in Pliensbachian-Toarcian cores from Alberta, Canada. This work focuses on the geochemical and petrographic description of these fans and surrounding sediment in the context of the T-OAE. At the macroscale, carbonates exhibit a fan-like (occasionally cone-in-cone) structure and displace the sediment around them as they grew. At the microscale, the carbonate crystals (pseudomorphs of aragonite) often initiate on condensed horizons or shells. Although they grow in multiple directions (growth within the sediment), the predominant crystal growth direction is towards the sediment-water interface. Resedimentation of broken fans is evidence that crystal growth was penecontemporaneous with sedimentation. The carbon isotope composition of the fans (transects up bladed crystals) and elemental abundances within the layers support shallow subsurface, microbially mediated growth. The resemblance of these Early Jurassic fibrous calcite layers to those found at the end-Triassic and their paucity in the Phanerozoic record suggest that analogous processes occurred at both events. Nevertheless, the Pliensbachian-Toarcian carbonate fans occur at multiple horizons and while some are within the T-OAE, others are significantly above and below the event. The formation of these authigenic layers cannot be driven exclusively by the geochemical and paleoenvironmental changes during the T-OAE. Therefore, a new model of formation for the Early Jurassic carbonate fans is required.

Simulations of the Richtmyer-Meshkov Instability in a two-shock vertical shock tube

NASA Astrophysics Data System (ADS)

Ferguson, Kevin; Olson, Britton; Jacobs, Jeffrey

2017-11-01

Simulations of the Richtmyer-Meshkov Instability (RMI) in a new two-shock vertical shock tube configuration are presented. The simulations are performed using the ARES code at Lawrence-Livermore National Laboratory (LLNL). Two M=1.2 shock waves travel in opposing directions and impact an initially stationary interface formed by sulfur hexaflouride (SF6) and air. The delay between the two shocks is controlled to achieve a prescribed temporal separation in shock wave arrival time. Initial interface perturbations and diffusion profiles are generated in keeping with previously gathered experimental data. The effect of varying the inter-shock delay and initial perturbation structure on instability growth and mixing parameters is examined. Information on the design, construction, and testing of a new two-shock vertical shock tube are also presented.

Application driven interface generation for EASIE. M.S. Thesis

NASA Technical Reports Server (NTRS)

Kao, Ya-Chen

1992-01-01

The Environment for Application Software Integration and Execution (EASIE) provides a user interface and a set of utility programs which support the rapid integration and execution of analysis programs about a central relational database. EASIE provides users with two basic modes of execution. One of them is a menu-driven execution mode, called Application-Driven Execution (ADE), which provides sufficient guidance to review data, select a menu action item, and execute an application program. The other mode of execution, called Complete Control Execution (CCE), provides an extended executive interface which allows in-depth control of the design process. Currently, the EASIE system is based on alphanumeric techniques only. It is the purpose of this project to extend the flexibility of the EASIE system in the ADE mode by implementing it in a window system. Secondly, a set of utilities will be developed to assist the experienced engineer in the generation of an ADE application.

Magneto-Rayleigh-Taylor instability in solid media

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sun, Y. B.; School of Physical Science and Technology, Lanzhou University, Lanzhou 73000; University of Chinese Academy of Sciences, Beijing 100049

2014-07-15

A linear analysis of the magneto-Rayleigh-Taylor instability at the interface between a Newtonian fluid and an elastic-plastic solid is performed by considering a uniform magnetic B{sup →}, parallel to the interface, which has diffused into the fluid but not into the solid. It is found that the magnetic field attributes elastic properties to the viscous fluid which enhance the stability region by stabilizing all the perturbation wavelengths shorter than λ{sub 0}∝B{sup 2} for any initial perturbation amplitude. Longer wavelengths are stabilized by the mechanical properties of the solid provided that the initial perturbation wavelength is smaller than a threshold valuemore » determined by the yield strength and the shear modulus of the solid. Beyond this threshold, the amplitude grows initially with a growth rate reduced by the solid strength properties. However, such properties do not affect the asymptotic growth rate which is only determined by the magnetic field and the fluid viscosity. The described physical situation intends to resemble some of the features present in recent experiments involving the magnetic shockless acceleration of flyers plates.« less

Seismoelectric numerical modeling on a grid

USGS Publications Warehouse

Haines, S.S.; Pride, S.R.

2006-01-01

Our finite-difference algorithm provides a new method for simulating how seismic waves in arbitrarily heterogeneous porous media generate electric fields through an electrokinetic mechanism called seismoelectric coupling. As the first step in our simulations, we calculate relative pore-fluid/grain-matrix displacement by using existing poroelastic theory. We then calculate the electric current resulting from the grain/fluid displacement by using seismoelectric coupling theory. This electrofiltration current acts as a source term in Poisson's equation, which then allows us to calculate the electric potential distribution. We can safely neglect induction effects in our simulations because the model area is within the electrostatic near field for the depth of investigation (tens to hundreds of meters) and the frequency ranges (10 Hz to 1 kHz) of interest for shallow seismoelectric surveys.We can independently calculate the electric-potential distribution for each time step in the poroelastic simulation without loss of accuracy because electro-osmotic feedback (fluid flow that is perturbed by generated electric fields) is at least 105 times smaller than flow that is driven by fluid-pressure gradients and matrix acceleration, and is therefore negligible. Our simulations demonstrate that, distinct from seismic reflections, the seismoelectric interface response from a thin layer (at least as thin as one-twentieth of the seismic wavelength) is considerably stronger than the response from a single interface. We find that the interface response amplitude decreases as the lateral extent of a layer decreases below the width of the first Fresnel zone. We conclude, on the basis of our modeling results and of field results published elsewhere, that downhole and/or crosswell survey geometries and time-lapse applications are particularly well suited to the seismoelectric method. ?? 2006 Society of Exploration Geophysicists.

Polar-direct-drive experiments with contoured-shell targets on OMEGA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marshall, F. J.; Radha, P. B.; Bonino, M. J.

Polar-driven direct-drive experiments recently performed on the OMEGA Laser System have demonstrated the efficacy of using a target with a contoured shell with varying thickness to improve the symmetry and fusion performance of the implosion. The polar-driven contoured-shell implosions have substantially reduced low mode perturbations compared to polar-driven spherical-shell implosions as diagnosed by x-ray radiographs up to shell stagnation. As a result, fusion yields were increased by more than a factor of ~2 without increasing the energy of the laser by the use of contoured shells.

Polar-direct-drive experiments with contoured-shell targets on OMEGA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marshall, F. J.; Radha, P. B.; Bonino, M. J.

Polar-driven direct-drive experiments recently performed on the OMEGA Laser System have demonstrated the efficacy of using a target with a contoured shell with varying thickness to improve the symmetry and fusion performance of the implosion. The polar-driven contoured-shell implosions have substantially reduced low mode perturbations compared to polar-driven spherical-shell implosions as diagnosed by x-ray radiographs up to shell stagnation. Fusion yields were increased by more than a factor of ∼2 without increasing the energy of the laser by the use of contoured shells.

Polar-direct-drive experiments with contoured-shell targets on OMEGA

DOE PAGES

Marshall, F. J.; Radha, P. B.; Bonino, M. J.; ...

2016-01-28

Polar-driven direct-drive experiments recently performed on the OMEGA Laser System have demonstrated the efficacy of using a target with a contoured shell with varying thickness to improve the symmetry and fusion performance of the implosion. The polar-driven contoured-shell implosions have substantially reduced low mode perturbations compared to polar-driven spherical-shell implosions as diagnosed by x-ray radiographs up to shell stagnation. As a result, fusion yields were increased by more than a factor of ~2 without increasing the energy of the laser by the use of contoured shells.

Symmetry mismatch-driven perpendicular magnetic anisotropy for perovskite/brownmillerite heterostructures.

PubMed

Zhang, Jing; Zhong, Zhicheng; Guan, Xiangxiang; Shen, Xi; Zhang, Jine; Han, Furong; Zhang, Hui; Zhang, Hongrui; Yan, Xi; Zhang, Qinghua; Gu, Lin; Hu, Fengxia; Yu, Richeng; Shen, Baogen; Sun, Jirong

2018-05-15

Grouping different transition metal oxides together by interface engineering is an important route toward emergent phenomenon. While most of the previous works focused on the interface effects in perovskite/perovskite heterostructures, here we reported on a symmetry mismatch-driven spin reorientation toward perpendicular magnetic anisotropy in perovskite/brownmillerite heterostructures, which is scarcely seen in tensile perovskite/perovskite heterostructures. We show that alternately stacking perovskite La 2/3 Sr 1/3 MnO 3 and brownmillerite LaCoO 2.5 causes a strong interface reconstruction due to symmetry discontinuity at interface: neighboring MnO 6 octahedra and CoO 4 tetrahedra at the perovskite/brownmillerite interface cooperatively relax in a manner that is unavailable for perovskite/perovskite interface, leading to distinct orbital reconstructions and thus the perpendicular magnetic anisotropy. Moreover, the perpendicular magnetic anisotropy is robust, with an anisotropy constant two orders of magnitude greater than the in-plane anisotropy of the perovskite/perovskite interface. The present work demonstrates the great potential of symmetry engineering in designing artificial materials on demand.

Statistical State Dynamics Based Study of the Role of Nonlinearity in the Maintenance of Turbulence in Couette Flow

NASA Astrophysics Data System (ADS)

Farrell, Brian; Ioannou, Petros; Nikolaidis, Marios-Andreas

2017-11-01

While linear non-normality underlies the mechanism of energy transfer from the externally driven flow to the perturbation field, nonlinearity is also known to play an essential role in sustaining turbulence. We report a study based on the statistical state dynamics of Couette flow turbulence with the goal of better understanding the role of nonlinearity in sustaining turbulence. The statistical state dynamics implementations used are ensemble closures at second order in a cumulant expansion of the Navier-Stokes equations in which the averaging operator is the streamwise mean. Two fundamentally non-normal mechanisms potentially contributing to maintaining the second cumulant are identified. These are essentially parametric perturbation growth arising from interaction of the perturbations with the fluctuating mean flow and transient growth of perturbations arising from nonlinear interaction between components of the perturbation field. By the method of selectively including these mechanisms parametric growth is found to maintain the perturbation field in the turbulent state while the more commonly invoked mechanism associated with transient growth of perturbations arising from scattering by nonlinear interaction is found to suppress perturbation variance. Funded by ERC Coturb Madrid Summer Program and NSF AGS-1246929.

Plasma kinetic effects on atomistic mix in one dimension and at structured interfaces (I)

NASA Astrophysics Data System (ADS)

Yin, L.; Albright, B. J.; Vold, E. L.; Taitano, W.; Chacon, L.; Simakov, A.

2017-10-01

Kinetic effects on interfacial mix are examined using VPIC simulations. In 1D, comparisons are made to the results of analytic theory in the small Knudsen number limit. While the bulk mixing properties of interfaces are in general agreement, differences arise near the low-concentration fronts during the early evolution of a sharp interface when the species' perpendicular scattering rate dominates over the slowing down rate. In kinetic simulations, the diffusion velocities can be larger or comparable to the ion thermal speeds, and the Knudsen number can be large. Super-diffusive growth in mix widths (Δx ta where a >=1/2) is seen before transition to the slow diffusive process predicted from theory (a =1/2). Mixing at interfaces leads to persistent, bulk, hydrodynamic features in the center of mass flow profiles as a result of diffusion and momentum conservation. These conclusions are drawn from VPIC results together with simulations from the RAGE hydrodynamics code with an implementation of diffusion and viscosity from theory and an implicit Vlasov-Fokker-Planck code iFP. In perturbed 2D and 3D interfaces, it is found that 1D ambipolarity is still valid and that initial perturbations flatten out on a-few-ps time scale, implying that finite diffusivity and viscosity can slow instability growth in ICF and HED settings. Work supported by the LANL ASC and Science programs.

Ionospheric response to infrasonic-acoustic waves generated by natural hazard events

NASA Astrophysics Data System (ADS)

Zettergren, M. D.; Snively, J. B.

2015-09-01

Recent measurements of GPS-derived total electron content (TEC) reveal acoustic wave periods of ˜1-4 min in the F region ionosphere following natural hazard events, such as earthquakes, severe weather, and volcanoes. Here we simulate the ionospheric responses to infrasonic-acoustic waves, generated by vertical accelerations at the Earth's surface or within the lower atmosphere, using a compressible atmospheric dynamics model to perturb a multifluid ionospheric model. Response dependencies on wave source geometry and spectrum are investigated at middle, low, and equatorial latitudes. Results suggest constraints on wave amplitudes that are consistent with observations and that provide insight on the geographical variability of TEC signatures and their dependence on the geometry of wave velocity field perturbations relative to the ambient geomagnetic field. Asymmetries of responses poleward and equatorward from the wave sources indicate that electron perturbations are enhanced on the equatorward side while field aligned currents are driven principally on the poleward side, due to alignments of acoustic wave velocities parallel and perpendicular to field lines, respectively. Acoustic-wave-driven TEC perturbations are shown to have periods of ˜3-4 min, which are consistent with the fraction of the spectrum that remains following strong dissipation throughout the thermosphere. Furthermore, thermospheric acoustic waves couple with ion sound waves throughout the F region and topside ionosphere, driving plasma disturbances with similar periods and faster phase speeds. The associated magnetic perturbations of the simulated waves are calculated to be observable and may provide new observational insight in addition to that provided by GPS TEC measurements.

Magnetohydrodynamic stability of stochastically driven accretion flows.

PubMed

Nath, Sujit Kumar; Mukhopadhyay, Banibrata; Chattopadhyay, Amit K

2013-07-01

We investigate the evolution of magnetohydrodynamic (or hydromagnetic as coined by Chandrasekhar) perturbations in the presence of stochastic noise in rotating shear flows. The particular emphasis is the flows whose angular velocity decreases but specific angular momentum increases with increasing radial coordinate. Such flows, however, are Rayleigh stable but must be turbulent in order to explain astrophysical observed data and, hence, reveal a mismatch between the linear theory and observations and experiments. The mismatch seems to have been resolved, at least in certain regimes, in the presence of a weak magnetic field, revealing magnetorotational instability. The present work explores the effects of stochastic noise on such magnetohydrodynamic flows, in order to resolve the above mismatch generically for the hot flows. We essentially concentrate on a small section of such a flow which is nothing but a plane shear flow supplemented by the Coriolis effect, mimicking a small section of an astrophysical accretion disk around a compact object. It is found that such stochastically driven flows exhibit large temporal and spatial autocorrelations and cross-correlations of perturbation and, hence, large energy dissipations of perturbation, which generate instability. Interestingly, autocorrelations and cross-correlations appear independent of background angular velocity profiles, which are Rayleigh stable, indicating their universality. This work initiates our attempt to understand the evolution of three-dimensional hydromagnetic perturbations in rotating shear flows in the presence of stochastic noise.

Evaluation of the toroidal torque driven by external non-resonant non-axisymmetric magnetic field perturbations in a tokamak

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kasilov, Sergei V.; Institute of Plasma Physics National Science Center “Kharkov Institute of Physics and Technology” ul. Akademicheskaya 1, 61108 Kharkov; Kernbichler, Winfried

2014-09-15

The toroidal torque driven by external non-resonant magnetic perturbations (neoclassical toroidal viscosity) is an important momentum source affecting the toroidal plasma rotation in tokamaks. The well-known force-flux relation directly links this torque to the non-ambipolar neoclassical particle fluxes arising due to the violation of the toroidal symmetry of the magnetic field. Here, a quasilinear approach for the numerical computation of these fluxes is described, which reduces the dimension of a standard neoclassical transport problem by one without model simplifications of the linearized drift kinetic equation. The only limiting condition is that the non-axisymmetric perturbation field is small enough such thatmore » the effect of the perturbation field on particle motion within the flux surface is negligible. Therefore, in addition to most of the transport regimes described by the banana (bounce averaged) kinetic equation also such regimes as, e.g., ripple-plateau and resonant diffusion regimes are naturally included in this approach. Based on this approach, a quasilinear version of the code NEO-2 [W. Kernbichler et al., Plasma Fusion Res. 3, S1061 (2008).] has been developed and benchmarked against a few analytical and numerical models. Results from NEO-2 stay in good agreement with results from these models in their pertinent range of validity.« less

On the Structure of the Mixing Zone at an Unstable Contact Boundary

NASA Astrophysics Data System (ADS)

Meshkov, E. E.

2018-01-01

The interface between two media of different densities (contact boundary) moving with an acceleration directed from the less dense medium to the more dense one is unstable (Rayleigh-Taylor instability) [1, 2]. The initial perturbations of the interface grow indefinitely and, as a result, a medium mixing zone growing with time is formed at the interface. The structure of such a mixing zone at gas-gas and gas-liquid interfaces is discussed on the basis of laboratory experiments on shock tubes of various types. It is concluded that the regions of turbulent and laminar flows are combined in the mixing zone.

Decision Aids Using Heterogeneous Intelligence Analysis

DTIC Science & Technology

2010-08-20

developing a Geocultural service, a software framework and inferencing engine for the Transparent Urban Structures program. The scope of the effort...has evolved as the program has matured and is including multiple data sources, as well as interfaces out to the ONR architectural framework . Tasks...Interface; Application Program Interface; Application Programmer Interface CAF Common Application Framework EDA Event Driven Architecture a 16. SECURITY

Cellular interface morphologies in directional solidification. II - The effect of grain boundaries

NASA Technical Reports Server (NTRS)

Ungar, Lyle H.; Brown, Robert A.

1984-01-01

A singular perturbation analysis valid for small grain-boundary slopes is used with the one-sided model for solidification to show that grain boundaries introduce imperfections into the symmetry of the developing cellular interfaces which rupture the junction between the family of planar shapes and the bifurcating cellular families. Undulating interfaces are shown to develop first near grain boundaries, and to evolve with decreasing temperature gradient either by a smooth transition from the almost planar family or by a sudden jump to moderate-amplitude cellular forms, depending on the growth rate.

Lagrangian chaos in three- dimensional steady buoyancy-driven flows

NASA Astrophysics Data System (ADS)

Contreras, Sebastian; Speetjens, Michel; Clercx, Herman

2016-11-01

Natural convection plays a key role in fluid dynamics owing to its ubiquitous presence in nature and industry. Buoyancy-driven flows are prototypical systems in the study of thermal instabilities and pattern formation. The differentially heated cavity problem has been widely studied for the investigation of buoyancy-induced oscillatory flow. However, far less attention has been devoted to the three-dimensional Lagrangian transport properties in such flows. This study seeks to address this by investigating Lagrangian transport in the steady flow inside a cubic cavity differentially-heated from the side. The theoretical and numerical analysis expands on previously reported similarities between the current flow and lid-driven flows. The Lagrangian dynamics are controlled by the Péclet number (Pe) and the Prandtl number (Pr). Pe controls the behaviour qualitatively in that growing Pe progressively perturbs the integable state (Pe =0), thus paving the way to chaotic dynamics. Pr plays an entirely quantitative role in that Pr<1 and Pr>1 amplifies and diminishes, respectively, the perturbative effect of non-zero Pe. S.C. acknowledges financial support from Consejo Nacional de Ciencia y Tecnología (CONACYT).

A Saturnian cam current system driven by asymmetric thermospheric heating

NASA Astrophysics Data System (ADS)

Smith, C. G. A.

2011-02-01

We show that asymmetric heating of Saturn's thermosphere can drive a current system consistent with the magnetospheric ‘cam’ proposed by Espinosa, Southwood & Dougherty. A geometrically simple heating distribution is imposed on the Northern hemisphere of a simplified three-dimensional global circulation model of Saturn's thermosphere. Currents driven by the resulting winds are calculated using a globally averaged ionosphere model. Using a simple assumption about how divergences in these currents close by flowing along dipolar field lines between the Northern and Southern hemispheres, we estimate the magnetic field perturbations in the equatorial plane and show that they are broadly consistent with the proposed cam fields, showing a roughly uniform field implying radial and azimuthal components in quadrature. We also identify a small longitudinal phase drift in the cam current with radial distance as a characteristic of a thermosphere-driven current system. However, at present our model does not produce magnetic field perturbations of the required magnitude, falling short by a factor of ˜100, a discrepancy that may be a consequence of an incomplete model of the ionospheric conductance.

First-principles approach to calculating energy level alignment at aqueous semiconductor interfaces

DOE PAGES

Kharche, Neerav; Muckerman, James T.; Hybertsen, Mark S.

2014-10-21

A first-principles approach is demonstrated for calculating the relationship between an aqueous semiconductor interface structure and energy level alignment. The physical interface structure is sampled using density functional theory based molecular dynamics, yielding the interface electrostatic dipole. The GW approach from many-body perturbation theory is used to place the electronic band edge energies of the semiconductor relative to the occupied 1 b₁ energy level in water. The application to the specific cases of nonpolar (101¯0 ) facets of GaN and ZnO reveals a significant role for the structural motifs at the interface, including the degree of interface water dissociation andmore » the dynamical fluctuations in the interface Zn-O and O-H bond orientations. As a result, these effects contribute up to 0.5 eV.« less

Supraglacial channel inception: Modeling and processes

NASA Astrophysics Data System (ADS)

Mantelli, E.; Camporeale, C.; Ridolfi, L.

2015-09-01

Supraglacial drainage systems play a key role in glacial hydrology. Nevertheless, physical processes leading to spatial organization in supraglacial networks are still an open issue. In the present work we thus address from a quantitative point of view the question of what is the physics leading to widely observed patterns made up of evenly spaced channels. To this aim, we set up a novel mathematical model describing a condition antecedent channel formation, i.e., the down-glacier flow of a distributed meltwater film. We then perform a linear stability analysis to assess whether the ice-water interface undergoes a morphological instability compatible with observed patterns. The instability is detected, its features depending on glacier surface slope, ice friction factor, and water as well as ice thermal conditions. By contrast, in our model channel spacing is solely hydrodynamically driven and relies on the interplay between pressure perturbations, flow depth response, and Reynolds stresses. Geometrical features of the predicted pattern are quantitatively consistent with available field data. The hydrodynamic origin of supraglacial channel morphogenesis suggests that alluvial patterns might share the same physical controls.

Investigation of Atwood ratio influence on turbulent mixing transition of a shock-driven variable density flow after reshock

NASA Astrophysics Data System (ADS)

Mohaghar, Mohammad; Carter, John; Pathikonda, Gokul; Ranjan, Devesh

2017-11-01

The current study experimentally investigates the influence of the initial Atwood ratio (At) on the evolution of Richtmyer-Meshkov instability at the Georgia Tech Shock Tube and Advanced Mixing Laboratory. Two Atwood numbers (At =0.22 and 0.67) are studied, which correspond to the gas combinations of nitrogen seeded with acetone vapor (light) over carbon dioxide (heavy) and same light gas over sulfur hexafluoride (heavy) respectively. A perturbed, multi-mode, inclined interface (with an amplitude to wavelength ratio of 0.088) is impulsively accelerated by the incident shock traveling vertically from light to heavy gas with a Mach number 1.55. The effect of Atwood ratio on turbulent mixing transition after reshock at the same non-dimensional times between the two cases is examined through ensemble-averaged turbulence statistics from simultaneous planar laser induced uorescence (PLIF) and particle image velocimetry (PIV) measurements. Preliminary studies over the smaller Atwood number indicates that turbulent mixing transition criteria can be satisfied after reshock. This work was supported by the National Science Foundation CAREER Award No. 1451994.

Interfacial Stability of Spherically Converging Plasma Jets for Magnetized Target Fusion

NASA Technical Reports Server (NTRS)

Thio, Y. C. Francis; Cassibry, Jason; Wu, S. T.; Eskridge, Richard; Smith, James; Lee, Michael; Rodgers, Stephen L. (Technical Monitor)

2000-01-01

A fusion propulsion scheme has been proposed that makes use of the merging of a spherical distribution of plasma jets to dynamically form a gaseous liner to implode a magnetized target to produce the fusion reaction. In this paper, a study is made of the interfacial stability of the interaction of these jets. Specifically, the Orr-Sommerfeld equation is integrated to obtain the growth rate of a perturbation to the primary flow at the interface between the colliding jets. The results lead to an estimate on the tolerances on the relative flow velocities of the merging plasma jets to form a stable, imploding liner. The results show that the maximum temporal growth rate of the perturbed flow at the jet interface is very small in comparison with the time to full compression of the liner. These data suggest that, as far as the stability of the interface between the merging jets is concerned, the formation of the gaseous liner can withstand velocity variation of the order of 10% between the neighboring jets over the density and temperature ranges investigated.

Charge separation at nanoscale interfaces: energy-level alignment including two-quasiparticle interactions.

PubMed

Li, Huashan; Lin, Zhibin; Lusk, Mark T; Wu, Zhigang

2014-10-21

The universal and fundamental criteria for charge separation at interfaces involving nanoscale materials are investigated. In addition to the single-quasiparticle excitation, all the two-quasiparticle effects including exciton binding, Coulomb stabilization, and exciton transfer are considered, which play critical roles on nanoscale interfaces for optoelectronic applications. We propose a scheme allowing adding these two-quasiparticle interactions on top of the single-quasiparticle energy level alignment for determining and illuminating charge separation at nanoscale interfaces. Employing the many-body perturbation theory based on Green's functions, we quantitatively demonstrate that neglecting or simplifying these crucial two-quasiparticle interactions using less accurate methods is likely to predict qualitatively incorrect charge separation behaviors at nanoscale interfaces where quantum confinement dominates.

A Menu-Driven Interface to Unix-Based Resources

PubMed Central

Evans, Elizabeth A.

1989-01-01

Unix has often been overlooked in the past as a viable operating system for anyone other than computer scientists. Its terseness, non-mnemonic nature of the commands, and the lack of user-friendly software to run under it are but a few of the user-related reasons which have been cited. It is, nevertheless, the operating system of choice in many cases. This paper describes a menu-driven interface to Unix which provides user-friendlier access to the software resources available on the computers running under Unix.

Loop corrections to primordial fluctuations from inflationary phase transitions

NASA Astrophysics Data System (ADS)

Wu, Yi-Peng; Yokoyama, Jun'ichi

2018-05-01

We investigate loop corrections to the primordial fluctuations in the single-field inflationary paradigm from spectator fields that experience a smooth transition of their vacuum expectation values. We show that when the phase transition involves a classical evolution effectively driven by a negative mass term from the potential, important corrections to the curvature perturbation can be generated by field perturbations that are frozen outside the horizon by the time of the phase transition, yet the correction to tensor perturbation is naturally suppressed by the spatial derivative couplings between spectator fields and graviton. At one-loop level, the dominant channel for the production of primordial fluctuations comes from a pair-scattering of free spectator fields that decay into the curvature perturbations, and this decay process is only sensitive to field masses comparable to the Hubble scale of inflation.

Scattering by Artificial Wind and Rain Roughened Water Surfaces at Oblique Incidences

NASA Technical Reports Server (NTRS)

Craeye, C.; Sobieski, P. W.; Bliven, L. F.

1997-01-01

Rain affects wind retrievals from scatterometric measurements of the sea surface. To depict the additional roughness caused by rain on a wind driven surface, we use a ring-wave spectral model. This enables us to analyse the rain effect on K(u) band scatterometric observations from two laboratory experiments. Calculations based on the small perturbation method provide good simulation of scattering measurements for the rain-only case, whereas for combined wind and rain cases, the boundary perturbation method is appropriate.

Modeling the poroelastic response to megathrust earthquakes: A look at the 2012 Mw 7.6 Costa Rican event

NASA Astrophysics Data System (ADS)

McCormack, Kimberly A.; Hesse, Marc A.

2018-04-01

We model the subsurface hydrologic response to the 7.6 Mw subduction zone earthquake that occurred on the plate interface beneath the Nicoya peninsula in Costa Rica on September 5, 2012. The regional-scale poroelastic model of the overlying plate integrates seismologic, geodetic and hydrologic data sets to predict the post-seismic poroelastic response. A representative two-dimensional model shows that thrust earthquakes with a slip width less than a third of their depth produce complex multi-lobed pressure perturbations in the shallow subsurface. This leads to multiple poroelastic relaxation timescales that may overlap with the longer viscoelastic timescales. In the three-dimensional model, the complex slip distribution of 2012 Nicoya event and its small width to depth ratio lead to a pore pressure distribution comprising multiple trench parallel ridges of high and low pressure. This leads to complex groundwater flow patterns, non-monotonic variations in predicted well water levels, and poroelastic relaxation on multiple time scales. The model also predicts significant tectonically driven submarine groundwater discharge off-shore. In the weeks following the earthquake, the predicted net submarine groundwater discharge in the study area increases, creating a 100 fold increase in net discharge relative to topography-driven flow over the first 30 days. Our model suggests the hydrological response on land is more complex than typically acknowledged in tectonic studies. This may complicate the interpretation of transient post-seismic surface deformations. Combined tectonic-hydrological observation networks have the potential to reduce such ambiguities.

Increased signaling entropy in cancer requires the scale-free property of protein interaction networks.

PubMed

Teschendorff, Andrew E; Banerji, Christopher R S; Severini, Simone; Kuehn, Reimer; Sollich, Peter

2015-04-28

One of the key characteristics of cancer cells is an increased phenotypic plasticity, driven by underlying genetic and epigenetic perturbations. However, at a systems-level it is unclear how these perturbations give rise to the observed increased plasticity. Elucidating such systems-level principles is key for an improved understanding of cancer. Recently, it has been shown that signaling entropy, an overall measure of signaling pathway promiscuity, and computable from integrating a sample's gene expression profile with a protein interaction network, correlates with phenotypic plasticity and is increased in cancer compared to normal tissue. Here we develop a computational framework for studying the effects of network perturbations on signaling entropy. We demonstrate that the increased signaling entropy of cancer is driven by two factors: (i) the scale-free (or near scale-free) topology of the interaction network, and (ii) a subtle positive correlation between differential gene expression and node connectivity. Indeed, we show that if protein interaction networks were random graphs, described by Poisson degree distributions, that cancer would generally not exhibit an increased signaling entropy. In summary, this work exposes a deep connection between cancer, signaling entropy and interaction network topology.

Explicit solutions of normal form of driven oscillatory systems in entrainment bands

NASA Astrophysics Data System (ADS)

Tsarouhas, George E.; Ross, John

1988-11-01

As in a prior article (Ref. 1), we consider an oscillatory dissipative system driven by external sinusoidal perturbations of given amplitude Q and frequency ω. The kinetic equations are transformed to normal form and solved for small Q near a Hopf bifurcation to oscillations in the autonomous system. Whereas before we chose irrational ratios of the frequency of the autonomous system ωn to ω, with quasiperiodic response of the system to the perturbation, we now choose rational coprime ratios, with periodic response (entrainment). The dissipative system has either two variables or is adequately described by two variables near the bifurcation. We obtain explicit solutions and develop these in detail for ωn/ω=1; 1:2; 2:1; 1:3; 3:1. We choose a specific dissipative model (Brusselator) and test the theory by comparison with full numerical solutions. The analytic solutions of the theory give an excellent approximation for the autonomous system near the bifurcation. The theoretically predicted and calculated entrainment bands agree very well for small Q in the vicinity of the bifurcation (small μ); deviations increase with increasing Q and μ. The theory is applicable to one or two external periodic perturbations.

Increased signaling entropy in cancer requires the scale-free property of protein interaction networks

PubMed Central

Teschendorff, Andrew E.; Banerji, Christopher R. S.; Severini, Simone; Kuehn, Reimer; Sollich, Peter

2015-01-01

One of the key characteristics of cancer cells is an increased phenotypic plasticity, driven by underlying genetic and epigenetic perturbations. However, at a systems-level it is unclear how these perturbations give rise to the observed increased plasticity. Elucidating such systems-level principles is key for an improved understanding of cancer. Recently, it has been shown that signaling entropy, an overall measure of signaling pathway promiscuity, and computable from integrating a sample's gene expression profile with a protein interaction network, correlates with phenotypic plasticity and is increased in cancer compared to normal tissue. Here we develop a computational framework for studying the effects of network perturbations on signaling entropy. We demonstrate that the increased signaling entropy of cancer is driven by two factors: (i) the scale-free (or near scale-free) topology of the interaction network, and (ii) a subtle positive correlation between differential gene expression and node connectivity. Indeed, we show that if protein interaction networks were random graphs, described by Poisson degree distributions, that cancer would generally not exhibit an increased signaling entropy. In summary, this work exposes a deep connection between cancer, signaling entropy and interaction network topology. PMID:25919796

Dynamic spin filtering at the Co/Alq3 interface mediated by weakly coupled second layer molecules.

PubMed

Droghetti, Andrea; Thielen, Philip; Rungger, Ivan; Haag, Norman; Großmann, Nicolas; Stöckl, Johannes; Stadtmüller, Benjamin; Aeschlimann, Martin; Sanvito, Stefano; Cinchetti, Mirko

2016-08-31

Spin filtering at organic-metal interfaces is often determined by the details of the interaction between the organic molecules and the inorganic magnets used as electrodes. Here we demonstrate a spin-filtering mechanism based on the dynamical spin relaxation of the long-living interface states formed by the magnet and weakly physisorbed molecules. We investigate the case of Alq3 on Co and, by combining two-photon photoemission experiments with electronic structure theory, show that the observed long-time spin-dependent electron dynamics is driven by molecules in the second organic layer. The interface states formed by physisorbed molecules are not spin-split, but acquire a spin-dependent lifetime, that is the result of dynamical spin-relaxation driven by the interaction with the Co substrate. Such spin-filtering mechanism has an important role in the injection of spin-polarized carriers across the interface and their successive hopping diffusion into successive molecular layers of molecular spintronics devices.

Dynamic spin filtering at the Co/Alq3 interface mediated by weakly coupled second layer molecules

PubMed Central

Droghetti, Andrea; Thielen, Philip; Rungger, Ivan; Haag, Norman; Großmann, Nicolas; Stöckl, Johannes; Stadtmüller, Benjamin; Aeschlimann, Martin; Sanvito, Stefano; Cinchetti, Mirko

2016-01-01

Spin filtering at organic-metal interfaces is often determined by the details of the interaction between the organic molecules and the inorganic magnets used as electrodes. Here we demonstrate a spin-filtering mechanism based on the dynamical spin relaxation of the long-living interface states formed by the magnet and weakly physisorbed molecules. We investigate the case of Alq3 on Co and, by combining two-photon photoemission experiments with electronic structure theory, show that the observed long-time spin-dependent electron dynamics is driven by molecules in the second organic layer. The interface states formed by physisorbed molecules are not spin-split, but acquire a spin-dependent lifetime, that is the result of dynamical spin-relaxation driven by the interaction with the Co substrate. Such spin-filtering mechanism has an important role in the injection of spin-polarized carriers across the interface and their successive hopping diffusion into successive molecular layers of molecular spintronics devices. PMID:27578395

Dynamic spin filtering at the Co/Alq3 interface mediated by weakly coupled second layer molecules

NASA Astrophysics Data System (ADS)

Droghetti, Andrea; Thielen, Philip; Rungger, Ivan; Haag, Norman; Großmann, Nicolas; Stöckl, Johannes; Stadtmüller, Benjamin; Aeschlimann, Martin; Sanvito, Stefano; Cinchetti, Mirko

2016-08-01

Spin filtering at organic-metal interfaces is often determined by the details of the interaction between the organic molecules and the inorganic magnets used as electrodes. Here we demonstrate a spin-filtering mechanism based on the dynamical spin relaxation of the long-living interface states formed by the magnet and weakly physisorbed molecules. We investigate the case of Alq3 on Co and, by combining two-photon photoemission experiments with electronic structure theory, show that the observed long-time spin-dependent electron dynamics is driven by molecules in the second organic layer. The interface states formed by physisorbed molecules are not spin-split, but acquire a spin-dependent lifetime, that is the result of dynamical spin-relaxation driven by the interaction with the Co substrate. Such spin-filtering mechanism has an important role in the injection of spin-polarized carriers across the interface and their successive hopping diffusion into successive molecular layers of molecular spintronics devices.

Interface-driven spin-torque ferromagnetic resonance by Rashba coupling at the interface between nonmagnetic materials

DOE PAGES

Jungfleisch, M. B.; Zhang, W.; Sklenar, J.; ...

2016-06-20

The Rashba-Edelstein effect stems from the interaction between the electron's spin and its momentum induced by spin-orbit interaction at an interface or a surface. It was shown that the inverse Rashba-Edelstein effect can be used to convert a spin current into a charge current. Here, we demonstrate the reverse process of a charge-to spin-current conversion at a Bi/Ag Rashba interface. We show that this interface-driven spin current can drive an adjacent ferromagnet to resonance. We employ a spin-torque ferromagnetic resonance excitation/detection scheme which was developed originally for a bulk spin-orbital effect, the spin Hall effect. In our experiment, the directmore » Rashba-Edelstein effect generates an oscillating spin current from an alternating charge current driving the magnetization precession in a neighboring permalloy (Py, Ni 80Fe 20) layer. As a result, electrical detection of the magnetization dynamics is achieved by a rectificationmechanism of the time dependent multilayer resistance arising from the anisotropic magnetoresistance.« less

A video, text, and speech-driven realistic 3-d virtual head for human-machine interface.

PubMed

Yu, Jun; Wang, Zeng-Fu

2015-05-01

A multiple inputs-driven realistic facial animation system based on 3-D virtual head for human-machine interface is proposed. The system can be driven independently by video, text, and speech, thus can interact with humans through diverse interfaces. The combination of parameterized model and muscular model is used to obtain a tradeoff between computational efficiency and high realism of 3-D facial animation. The online appearance model is used to track 3-D facial motion from video in the framework of particle filtering, and multiple measurements, i.e., pixel color value of input image and Gabor wavelet coefficient of illumination ratio image, are infused to reduce the influence of lighting and person dependence for the construction of online appearance model. The tri-phone model is used to reduce the computational consumption of visual co-articulation in speech synchronized viseme synthesis without sacrificing any performance. The objective and subjective experiments show that the system is suitable for human-machine interaction.

Coupling between velocity and interface perturbations in cylindrical Rayleigh–Taylor instability

NASA Astrophysics Data System (ADS)

Guo, Hong-Yu; Wang, Li-Feng; Ye, Wen-Hua; Wu, Jun-Feng; Zhang, Wei-Yan

2018-05-01

Not Available Project supported by the National Natural Science Foundation of China (Grant Nos. 11275031, 11475034, 11575033, and 11274026) and the National Basic Research Program of China (Grant No. 2013CB834100).

Visualizing Perturbation Decay in Shocked Granular Materials

NASA Astrophysics Data System (ADS)

Cooper, Marcia; Vogler, Tracy

2017-06-01

A new experiment continuously visualizing shock wave perturbation decay through an increasing thickness of granular material has been tested with a gas gun. The experiment confines powders of either tungsten carbide or cerium oxide into a wedge geometry formed by tilting the downstream observation window, plated with a reflective aluminum film, at a shallow angle from the driver plate. The driver is machined with a sinusoidal wavy pattern for incident shock wave perturbation. After projectile impact, the perturbed shock wave passes through the granular material, first emerging at the wedge toe. Image sequences collected at 5 MHz of reflectivity loss at the plated window-granular material interface capture the spatial variation in wave propagation with increasing sample thickness. Extracting the evolving wavy pattern from the images determines the temporal perturbation amplitude. The data are compared to continuum and mesoscale simulations in normalized terms of perturbation amplitude and wavelength. Sandia National Laboratories is a multi-mission laboratory managed and operated by Sandia Corporation, a wholly owned subsidiary of Lockheed Martin Corporation, for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-AC04-94AL85000.

A Closed-loop Brain Computer Interface to a Virtual Reality Avatar: Gait Adaptation to Visual Kinematic Perturbations

PubMed Central

Luu, Trieu Phat; He, Yongtian; Brown, Samuel; Nakagome, Sho; Contreras-Vidal, Jose L.

2016-01-01

The control of human bipedal locomotion is of great interest to the field of lower-body brain computer interfaces (BCIs) for rehabilitation of gait. While the feasibility of a closed-loop BCI system for the control of a lower body exoskeleton has been recently shown, multi-day closed-loop neural decoding of human gait in a virtual reality (BCI-VR) environment has yet to be demonstrated. In this study, we propose a real-time closed-loop BCI that decodes lower limb joint angles from scalp electroencephalography (EEG) during treadmill walking to control the walking movements of a virtual avatar. Moreover, virtual kinematic perturbations resulting in asymmetric walking gait patterns of the avatar were also introduced to investigate gait adaptation using the closed-loop BCI-VR system over a period of eight days. Our results demonstrate the feasibility of using a closed-loop BCI to learn to control a walking avatar under normal and altered visuomotor perturbations, which involved cortical adaptations. These findings have implications for the development of BCI-VR systems for gait rehabilitation after stroke and for understanding cortical plasticity induced by a closed-loop BCI system. PMID:27713915

Improved EOS for describing high-temperature off-hugoniot states in epoxy

NASA Astrophysics Data System (ADS)

Mulford, R. N.; Lanier, N. E.; Swift, D.; Workman, J.; Graham, Peter; Moore, Alastair

2007-06-01

Modeling of off-hugoniot states in an expanding interface subjected to a shock reveals the importance of a chemically complete description of the materials. Hydrodynamic experiments typically rely on pre-shot target characterization to predict how initial perturbations will affect the late-time hydrodynamic mixing. However, it is the condition of these perturbations at the time of shock arrival that dominates their eventual late-time evolution. In some cases these perturbations are heated prior to the arrival of the main shock. Correctly modeling how temperature and density gradients will develop in the pre-heated material requires an understanding of the equation-of-state. In the experiment modelled, an epoxy/foam layered package was subjected to tin L-shell radiation, producing an expanding assembly at a well-defined temperature. This assembly was then subjected to a controlled shock, and the evolution of the epoxy-foam interface imaged with x-ray radiography. Modeling of the data with the hydrodynamics code RAGE is unsuccessful under certain shock conditions, unless condensation of chemical species from the plasma is explicitly included. The EOS code CHEETAH was used to prepare suitable EOS for input into the hydrodynamics modeling.

Improved EOS for Describing High-Temperature Off-Hugoniot States in Epoxy

NASA Astrophysics Data System (ADS)

Mulford, R. N.; Swift, D. C.; Lanier, N. E.; Workman, J.; Holmes, R. L.; Graham, P.; Moore, A.

2007-12-01

Modelling of off-Hugoniot states in an expanding interface subjected to a shock reveals the importance of a chemically complete description of the materials. Hydrodynamic experiments typically rely on pre-shot target characterization to predict how initial perturbations will affect the late-time hydrodynamic mixing. However, it is the condition of these perturbations at the time of shock arrival that dominates their eventual late-time evolution. In some cases these perturbations are heated prior to the arrival of the main shock. Correctly modelling how temperature and density gradients will develop in the pre-heated material requires an understanding of the equation-of-state. In the experiment modelled, an epoxy/foam layered package was subjected to tin L-shell radiation, producing an expanding assembly at a well-defined temperature. This assembly was then subjected to a controlled shock, and the evolution of the epoxy-foam interface imaged with x-ray radiography. Modelling of the data with the hydrodynamics code RAGE was unsuccessful under certain shock conditions, unless condensation of chemical species from the plasma is explicitly included. The EOS code Cheetah was used to prepare suitable EOS for input into the hydrodynamics modelling.

Weakly nonlinear incompressible Rayleigh-Taylor instability in spherical geometry

NASA Astrophysics Data System (ADS)

Zhang, J.; Wang, L. F.; Ye, W. H.; Wu, J. F.; Guo, H. Y.; Zhang, W. Y.; He, X. T.

2017-06-01

In this research, a weakly nonlinear (WN) model for the incompressible Rayleigh-Taylor instability in cylindrical geometry [Wang et al., Phys. Plasmas 20, 042708 (2013)] is generalized to spherical geometry. The evolution of the interface with an initial small-amplitude single-mode perturbation in the form of Legendre mode (Pn) is analysed with the third-order WN solutions. The transition of the small-amplitude perturbed spherical interface to the bubble-and-spike structure can be observed by our model. For single-mode perturbation Pn, besides the generation of P 2 n and P 3 n , which are similar to the second and third harmonics in planar and cylindrical geometries, many other modes in the range of P0- P 3 n are generated by mode-coupling effects up to the third order. With the same initial amplitude, the bubbles at the pole grow faster than those at the equator in the WN regime. Furthermore, it is found that the behavior of the bubbles at the pole is similar to that of three-dimensional axisymmetric bubbles, while the behavior of the bubbles at the equator is similar to that of two-dimensional bubbles.

Cryo-EM Data Are Superior to Contact and Interface Information in Integrative Modeling.

PubMed

de Vries, Sjoerd J; Chauvot de Beauchêne, Isaure; Schindler, Christina E M; Zacharias, Martin

2016-02-23

Protein-protein interactions carry out a large variety of essential cellular processes. Cryo-electron microscopy (cryo-EM) is a powerful technique for the modeling of protein-protein interactions at a wide range of resolutions, and recent developments have caused a revolution in the field. At low resolution, cryo-EM maps can drive integrative modeling of the interaction, assembling existing structures into the map. Other experimental techniques can provide information on the interface or on the contacts between the monomers in the complex. This inevitably raises the question regarding which type of data is best suited to drive integrative modeling approaches. Systematic comparison of the prediction accuracy and specificity of the different integrative modeling paradigms is unavailable to date. Here, we compare EM-driven, interface-driven, and contact-driven integrative modeling paradigms. Models were generated for the protein docking benchmark using the ATTRACT docking engine and evaluated using the CAPRI two-star criterion. At 20 Å resolution, EM-driven modeling achieved a success rate of 100%, outperforming the other paradigms even with perfect interface and contact information. Therefore, even very low resolution cryo-EM data is superior in predicting heterodimeric and heterotrimeric protein assemblies. Our study demonstrates that a force field is not necessary, cryo-EM data alone is sufficient to accurately guide the monomers into place. The resulting rigid models successfully identify regions of conformational change, opening up perspectives for targeted flexible remodeling. Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Cryo-EM Data Are Superior to Contact and Interface Information in Integrative Modeling

PubMed Central

de Vries, Sjoerd J.; Chauvot de Beauchêne, Isaure; Schindler, Christina E.M.; Zacharias, Martin

2016-01-01

Protein-protein interactions carry out a large variety of essential cellular processes. Cryo-electron microscopy (cryo-EM) is a powerful technique for the modeling of protein-protein interactions at a wide range of resolutions, and recent developments have caused a revolution in the field. At low resolution, cryo-EM maps can drive integrative modeling of the interaction, assembling existing structures into the map. Other experimental techniques can provide information on the interface or on the contacts between the monomers in the complex. This inevitably raises the question regarding which type of data is best suited to drive integrative modeling approaches. Systematic comparison of the prediction accuracy and specificity of the different integrative modeling paradigms is unavailable to date. Here, we compare EM-driven, interface-driven, and contact-driven integrative modeling paradigms. Models were generated for the protein docking benchmark using the ATTRACT docking engine and evaluated using the CAPRI two-star criterion. At 20 Å resolution, EM-driven modeling achieved a success rate of 100%, outperforming the other paradigms even with perfect interface and contact information. Therefore, even very low resolution cryo-EM data is superior in predicting heterodimeric and heterotrimeric protein assemblies. Our study demonstrates that a force field is not necessary, cryo-EM data alone is sufficient to accurately guide the monomers into place. The resulting rigid models successfully identify regions of conformational change, opening up perspectives for targeted flexible remodeling. PMID:26846888

Harmonic growth of spherical Rayleigh-Taylor instability in weakly nonlinear regime

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Wanhai; LHD, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190; Chen, Yulian

Harmonic growth in classical Rayleigh-Taylor instability (RTI) on a spherical interface is analytically investigated using the method of the parameter expansion up to the third order. Our results show that the amplitudes of the first four harmonics will recover those in planar RTI as the interface radius tends to infinity compared against the initial perturbation wavelength. The initial radius dramatically influences the harmonic development. The appearance of the second-order feedback to the initial unperturbed interface (i.e., the zeroth harmonic) makes the interface move towards the spherical center. For these four harmonics, the smaller the initial radius is, the faster theymore » grow.« less

Impedance spectroscopy of the electrode-tissue interface of living heart with isoösmotic conductivity perturbation

NASA Astrophysics Data System (ADS)

Ovadia, Marc; Zavitz, Daniel H.

2004-06-01

Impedance spectroscopy was used to solve the Pt electrode interface with metabolically active perfused living heart. Three impedance spectra were observed: the Warburg impedance ( ZW∞), a single high angle constant-phase-element, and a thin-film impedance ( ZD). When characterized again after cyclic change of ionic strength (and hence conductivity κ) each interface had one of only two spectra, with exclusion of ZW∞. The in vivo interfacial impedance spectrum is thus neither single-valued nor stable in time. Because metal|living tissue interfaces are obligatory circuit elements in biosensors and electrodes in heart and brain, the multiple-valued and thin-film character of its impedance are significant.

Electronic properties of semiconductor-water interfaces: Predictions from ab-initio molecular dynamics and many-body perturbation theory

NASA Astrophysics Data System (ADS)

Pham, Tuan Anh

2015-03-01

Photoelectrochemical cells offer a promising avenue for hydrogen production from water and sunlight. The efficiency of these devices depends on the electronic structure of the interface between the photoelectrode and liquid water, including the alignment between the semiconductor band edges and the water redox potential. In this talk, we will present the results of first principles calculations of semiconductor-water interfaces that are obtained with a combination of density functional theory (DFT)-based molecular dynamics simulations and many-body perturbation theory (MBPT). First, we will discuss the development of an MBPT approach that is aimed at improving the efficiency and accuracy of existing methodologies while still being applicable to complex heterogeneous interfaces consisting of hundreds of atoms. We will then present studies of the electronic structure of liquid water and aqueous solutions using MBPT, which represent an essential step in establishing a quantitative framework for computing the energy alignment at semiconductor-water interfaces. Finally, using a combination of DFT-based molecular dynamics simulations and MBPT, we will describe the relationship between interfacial structure, electronic properties of semiconductors and their reactivity in aqueous solutions through a number of examples, including functionalized Si surfaces and GaP/InP surfaces in contact with liquid water. T.A.P was supported by the U.S. Department of Energy at the Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344 and by the Lawrence Fellowship Program.

Data-driven development of AOP knowledge

EPA Science Inventory

The Adverse Outcome Pathway framework represents a systematic way to organize mechanistic information underlying toxicology, and it is specifically designed to connect early stage molecular perturbations by chemicals and other stressors with adverse outcomes in humans and wildlif...

Chirping and Sudden Excitation of Energetic-Particle-Driven Geodesic Acoustic Modes in a Large Helical Device Experiment

NASA Astrophysics Data System (ADS)

Wang, Hao; Todo, Yasushi; Ido, Takeshi; Suzuki, Yasuhiro

2018-04-01

Energetic-particle-driven geodesic acoustic modes (EGAMs) observed in a Large Helical Device experiment are investigated using a hybrid simulation code for energetic particles interacting with a magnetohydrodynamic (MHD) fluid. The frequency chirping of the primary mode and the sudden excitation of the half-frequency secondary mode are reproduced for the first time with the hybrid simulation using the realistic physical condition and the three-dimensional equilibrium. Both EGAMs have global spatial profiles which are consistent with the experimental measurements. For the secondary mode, the bulk pressure perturbation and the energetic particle pressure perturbation cancel each other out, and thus the frequency is lower than the primary mode. It is found that the excitation of the secondary mode does not depend on the nonlinear MHD coupling. The secondary mode is excited by energetic particles that satisfy the linear and nonlinear resonance conditions, respectively, for the primary and secondary modes.

Chirping and Sudden Excitation of Energetic-Particle-Driven Geodesic Acoustic Modes in a Large Helical Device Experiment.

PubMed

Wang, Hao; Todo, Yasushi; Ido, Takeshi; Suzuki, Yasuhiro

2018-04-27

Energetic-particle-driven geodesic acoustic modes (EGAMs) observed in a Large Helical Device experiment are investigated using a hybrid simulation code for energetic particles interacting with a magnetohydrodynamic (MHD) fluid. The frequency chirping of the primary mode and the sudden excitation of the half-frequency secondary mode are reproduced for the first time with the hybrid simulation using the realistic physical condition and the three-dimensional equilibrium. Both EGAMs have global spatial profiles which are consistent with the experimental measurements. For the secondary mode, the bulk pressure perturbation and the energetic particle pressure perturbation cancel each other out, and thus the frequency is lower than the primary mode. It is found that the excitation of the secondary mode does not depend on the nonlinear MHD coupling. The secondary mode is excited by energetic particles that satisfy the linear and nonlinear resonance conditions, respectively, for the primary and secondary modes.

Universal energy distribution for interfaces in a random-field environment

NASA Astrophysics Data System (ADS)

Fedorenko, Andrei A.; Stepanow, Semjon

2003-11-01

We study the energy distribution function ρ(E) for interfaces in a random-field environment at zero temperature by summing the leading terms in the perturbation expansion of ρ(E) in powers of the disorder strength, and by taking into account the nonperturbational effects of the disorder using the functional renormalization group. We have found that the average and the variance of the energy for one-dimensional interface of length L behave as, R∝L ln L, ΔER∝L, while the distribution function of the energy tends for large L to the Gumbel distribution of the extreme value statistics.

Richtmyer-Meshkov instability for elastic-plastic solids in converging geometries

NASA Astrophysics Data System (ADS)

López Ortega, A.; Lombardini, M.; Barton, P. T.; Pullin, D. I.; Meiron, D. I.

2015-03-01

We present a detailed study of the interface instability that develops at the boundary between a shell of elastic-plastic material and a cylindrical core of confined gas during the inbound implosive motion generated by a shock-wave. The main instability in this configuration is the so-called Richtmyer-Meshkov instability that arises when the shock wave crosses the material interface. Secondary instabilities, such as Rayleigh-Taylor, due to the acceleration of the interface, and Kelvin-Helmholtz, due to slip between solid and fluid, arise as the motion progresses. The reflection of the shock wave at the axis and its second interaction with the material interface as the shock moves outbound, commonly known as re-shock, results in a second Richtmyer-Meshkov instability that potentially increases the growth rate of interface perturbations, resulting in the formation of a mixing zone typical of fluid-fluid configurations and the loss of the initial perturbation length scales. The study of this problem is of interest for achieving stable inertial confinement fusion reactions but its complexity and the material conditions produced by the implosion close to the axis prove to be challenging for both experimental and numerical approaches. In this paper, we attempt to circumvent some of the difficulties associated with a classical numerical treatment of this problem, such as element inversion in Lagrangian methods or failure to maintain the relationship between the determinant of the deformation tensor and the density in Eulerian approaches, and to provide a description of the different events that occur during the motion of the interface. For this purpose, a multi-material numerical solver for evolving in time the equations of motion for solid and fluid media in an Eulerian formalism has been implemented in a Cartesian grid. Equations of state are derived using thermodynamically consistent hyperelastic relations between internal energy and stresses. The resolution required for capturing the state of solid and fluid materials close to the origin is achieved by making use of adaptive mesh refinement techniques. Rigid-body rotations contained in the deformation tensor have been shown to have a negative effect on the accuracy of the method in extreme compression conditions and are removed by transforming the deformation tensor into a stretch tensor at each time step. With this methodology, the evolution of the interface can be tracked up to a point at which numerical convergence cannot be achieved due to the inception of numerical Kelvin-Helmholtz instabilities caused by slip between materials. From that point, only qualitative conclusions can be extracted from this analysis. The influence of different geometrical parameters, initial conditions, and material properties on the motion of the interface are investigated. Some major differences are found with respect to the better understood fluid-fluid case. For example, increasing the wave number of the interface perturbations leads to a second phase reversal of the interface (i.e., the first phase reversal of the interface naturally occurs due to the initial negative growth-rate of the instability as the shock wave transitions from the high-density material to the low-density one). This phenomenon is caused by the compressive effect of the converging geometry and the low density of the gas with respect to the solid, which allows for the formation of an incipient spike in the center of an already existing bubble. Multiple solid-gas density ratios are also considered. Results show that the motion of the interface asymptotically converges to the solid-vacuum case. When a higher initial density for the gas is considered, the growth rate of interface perturbations decreases and, in some situations, its sign may reverse, as the fluid becomes more dense than the solid due to having higher compressibility. Finally, the influence of the Mach number of the driving shock and the yield stress on the mixing-zone is examined. We find that the width of the mixing zone produced after the re-shock increases in proportion to the strength of the incident shock. An increased yield stress in the solid material makes the interface less unstable due to vorticity being carried away from the interface by shear waves and limits the generation of smaller length scales after the re-shock.

Proximity-driven enhanced magnetic order at ferromagnetic-insulator-magnetic-topological-insulator interface

DOE PAGES

Li, Mingda; Zhu, Yimei; Chang, Cui -Zu; ...

2015-08-17

Magnetic exchange driven proximity effect at a magnetic-insulator–topological-insulator (MI-TI) interface provides a rich playground for novel phenomena as well as a way to realize low energy dissipation quantum devices. In this study, we report a dramatic enhancement of proximity exchange coupling in the MI/magnetic-TI EuS/Sb 2–xV xTe 3 hybrid heterostructure, where V doping is used to drive the TI (Sb 2Te 3) magnetic. We observe an artificial antiferromagneticlike structure near the MI-TI interface, which may account for the enhanced proximity coupling. The interplay between the proximity effect and doping in a hybrid heterostructure provides insights into the engineering of magneticmore » ordering.« less

Relaxation near Supermassive Black Holes Driven by Nuclear Spiral Arms: Anisotropic Hypervelocity Stars, S-stars, and Tidal Disruption Events

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hamers, Adrian S.; Perets, Hagai B., E-mail: hamers@ias.edu

Nuclear spiral arms are small-scale transient spiral structures found in the centers of galaxies. Similarly to their galactic-scale counterparts, nuclear spiral arms can perturb the orbits of stars. In the case of the Galactic center (GC), these perturbations can affect the orbits of stars and binaries in a region extending to several hundred parsecs around the supermassive black hole (SMBH), causing diffusion in orbital energy and angular momentum. This diffusion process can drive stars and binaries to close approaches with the SMBH, disrupting single stars in tidal disruption events (TDEs), or disrupting binaries, leaving a star tightly bound to themore » SMBH and an unbound star escaping the galaxy, i.e., a hypervelocity star (HVS). Here, we consider diffusion by nuclear spiral arms in galactic nuclei, specifically the Milky Way GC. We determine nuclear-spiral-arm-driven diffusion rates using test-particle integrations and compute disruption rates. Our TDE rates are up to 20% higher compared to relaxation by single stars. For binaries, the enhancement is up to a factor of ∼100, and our rates are comparable to the observed numbers of HVSs and S-stars. Our scenario is complementary to relaxation driven by massive perturbers. In addition, our rates depend on the inclination of the binary with respect to the Galactic plane. Therefore, our scenario provides a novel potential source for the observed anisotropic distribution of HVSs. Nuclear spiral arms may also be important for accelerating the coalescence of binary SMBHs and for supplying nuclear star clusters with stars and gas.« less

Cosmological perturbations and noncommutative tachyon inflation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu Daojun; Li Xinzhou

2004-12-15

The motivation for studying the rolling tachyon and noncommutative inflation comes from string theory. In the tachyon inflation scenario, metric perturbations are created by tachyon field fluctuations during inflation. We drive the exact mode equation for scalar perturbations of the metric and investigate the cosmological perturbations in the commutative and noncommutative inflationary spacetime driven by the tachyon field which have a Born-Infeld Lagrangian. Although at lowest order the predictions of tachyon inflation are no different than those from standard slow-roll inflation, due to the modified inflationary dynamics there exists modifications to the power spectra of fluctuations generated during inflation. Inmore » the noncommutative tachyon inflation scenario, the stringy noncommutativity of spacetime results in corrections to the primordial power spectrum that lead to a spectral index that is greater than 1 on large scales and less than 1 on small scales as the first-year results of the Wilkinson Microwave Anisotropy Probe indicate.« less

A generalized non-Gaussian consistency relation for single field inflation

NASA Astrophysics Data System (ADS)

Bravo, Rafael; Mooij, Sander; Palma, Gonzalo A.; Pradenas, Bastián

2018-05-01

We show that a perturbed inflationary spacetime, driven by a canonical single scalar field, is invariant under a special class of coordinate transformations together with a field reparametrization of the curvature perturbation in co-moving gauge. This transformation may be used to derive the squeezed limit of the 3-point correlation function of the co-moving curvature perturbations valid in the case that these do not freeze after horizon crossing. This leads to a generalized version of Maldacena's non-Gaussian consistency relation in the sense that the bispectrum squeezed limit is completely determined by spacetime diffeomorphisms. Just as in the case of the standard consistency relation, this result may be understood as the consequence of how long-wavelength modes modulate those of shorter wavelengths. This relation allows one to derive the well known violation to the consistency relation encountered in ultra slow-roll, where curvature perturbations grow exponentially after horizon crossing.

Heisenberg equation for a nonrelativistic particle on a hypersurface: From the centripetal force to a curvature induced force

NASA Astrophysics Data System (ADS)

Lian, D. K.; Hu, L. D.; Liu, Q. H.

2017-12-01

In classical mechanics, a nonrelativistic particle constrained on an N - 1 curved hypersurface embedded in N flat space experiences the centripetal force only. In quantum mechanics, the situation is totally different for the presence of the geometric potential. We demonstrate that the motion of the quantum particle is "driven" by not only the centripetal force, but also a curvature induced force proportional to the Laplacian of the mean curvature, which is fundamental in the interface physics, causing curvature driven interface evolution.

Time-Dependent Thermally-Driven Interfacial Flows in Multilayered Fluid Structures

NASA Technical Reports Server (NTRS)

Haj-Hariri, Hossein; Borhan, A.

1996-01-01

A computational study of thermally-driven convection in multilayered fluid structures will be performed to examine the effect of interactions among deformable fluid-fluid interfaces on the structure of time-dependent flow in these systems. Multilayered fluid structures in two models configurations will be considered: the differentially heated rectangular cavity with a free surface, and the encapsulated cylindrical liquid bridge. An extension of a numerical method developed as part of our recent NASA Fluid Physics grant will be used to account for finite deformations of fluid-fluid interfaces.

Thermally driven film climbing a vertical cylinder

NASA Astrophysics Data System (ADS)

Smolka, Linda

2017-11-01

The dynamics of a Marangoni driven film climbing the outside of a vertical cylinder is examined in numerical simulations of a thin film model. The model has three parameters: the scaled cylinder radius R̂, upstream film height h∞ and downstream precursor film thickness b , and reduces to the model for Marangoni driven film climbing a vertical plate when R̂ -> ∞ . The advancing front displays dynamics similar to that along a vertical plate where, depending on h∞ , the film forms a Lax shock, an undercompressive double shock or a rarefaction-undercompressive shock. A linear stability analysis of the Lax shock reveals the number of fingers that form along the contact line increases linearly with cylinder circumference while no fingers form below R̂ 1.15 with b = 0.1 . The substrate curvature controls the Lax shock height, bounds on h∞ that define the three solutions and the maximum growth rate of perturbations when R̂ = O (1) , whereas the shape of solutions and the stability of the Lax shock converge to the behavior on a vertical plate when R̂ >= O (10) . The azimuthal curvatures of the base state and perturbation, arising from the annular geometry of the film, promote instability of the advancing contact line.

Free Energies of Quantum Particles: The Coupled-Perturbed Quantum Umbrella Sampling Method.

PubMed

Glover, William J; Casey, Jennifer R; Schwartz, Benjamin J

2014-10-14

We introduce a new simulation method called Coupled-Perturbed Quantum Umbrella Sampling that extends the classical umbrella sampling approach to reaction coordinates involving quantum mechanical degrees of freedom. The central idea in our method is to solve coupled-perturbed equations to find the response of the quantum system's wave function along a reaction coordinate of interest. This allows for propagation of the system's dynamics under the influence of a quantum biasing umbrella potential and provides a method to rigorously undo the effects of the bias to compute equilibrium ensemble averages. In this way, one can drag electrons into regions of high free energy where they would otherwise not go, thus enabling chemistry by fiat. We demonstrate the applicability of our method for two condensed-phase systems of interest. First, we consider the interaction of a hydrated electron with an aqueous sodium cation, and we calculate a potential of mean force that shows that an e(-):Na(+) contact pair is the thermodynamically favored product starting from either a neutral sodium atom or the separate cation and electron species. Second, we present the first determination of a hydrated electron's free-energy profile relative to an air/water interface. For the particular model parameters used, we find that the hydrated electron is more thermodynamically stable in the bulk rather than at the interface. Our analysis suggests that the primary driving force keeping the electron away from the interface is the long-range electron-solvent polarization interaction rather than the short-range details of the chosen pseudopotential.

Cylindrical effects on Richtmyer-Meshkov instability for arbitrary Atwood numbers in weakly nonlinear regime

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, W. H.; He, X. T.; LCP, Institute of Applied Physics and Computational Mathematics, Beijing 100088

2012-07-15

When an incident shock collides with a corrugated interface separating two fluids of different densities, the interface is prone to Richtmyer-Meshkov instability (RMI). Based on the formal perturbation expansion method as well as the potential flow theory, we present a simple method to investigate the cylindrical effects in weakly nonlinear RMI with the transmitted and reflected cylindrical shocks by considering the nonlinear corrections up to fourth order. The cylindrical results associated with the material interface show that the interface expression consists of two parts: the result in the planar system and that from the cylindrical effects. In the limit ofmore » the cylindrical radius tending to infinity, the cylindrical results can be reduced to those in the planar system. Our explicit results show that the cylindrical effects exert an inward velocity on the whole perturbed interface, regardless of bubbles or spikes of the interface. On the one hand, outgoing bubbles are constrained and ingoing spikes are accelerated for different Atwood numbers (A) and mode numbers k'. On the other hand, for ingoing bubbles, when |A|k'{sup 3/2} Less-Than-Or-Equivalent-To 1, bubbles are considerably accelerated especially at the small |A| and k'; otherwise, bubbles are decelerated. For outgoing spikes, when |A|k' Greater-Than-Or-Equivalent-To 1, spikes are dramatically accelerated especially at large |A| and k'; otherwise, spikes are decelerated. Furthermore, the cylindrical effects have a significant influence on the amplitudes of the ingoing spike and bubble for large k'. Thus, it should be included in applications where the cylindrical effects play a role, such as inertial confinement fusion ignition target design.« less

Do Europa's Mountains Have Roots? Erosion of Topography at the Ice-Water Interface via the "Ice Pump"

NASA Astrophysics Data System (ADS)

Goodman, J. C.

2016-12-01

Are topographic features on the surface of Europa and other icy worlds isostatically compensated by variations in shell thickness (Airy isostasy)? This is only possible if variations in shell thickness can remain stable over geologic time. Here we show that melting and freezing driven by the pressure dependence of the melting point of water - the "ice pump" - can rapidly erase topography at the ice/water interface. We consider ice pumps driven by both tidal action and buoyancy-driven flow. We first show that as tidal action drives the ocean up and down along a sloping interface, ice will be melted from areas where it's thickest and deposited where the ice is thinnest. We show that this process causes the ice interface topography to relax according to a simple "diffusion" linear partial differential equation. We estimate that a 10-km-wide topographic feature would be erased by the tidal ice pump in 3000 years if Europa's tidal current amplitude is 1 cm/s; however, this timescale is inversely proportional to the cube of the tidal velocity! Next, we consider an ice pump powered by ascent of meltwater along a sloping ice-water interface. We consider layer-averaged budgets for heat, mass, and momentum, along with turbulent mixing of the meltwater layer with underlying seawater via a Richardson number dependent entrainment process, and use these to estimate the thickness and mass flux of the meltwater layer. From this we estimate the rate of melting and freezing at the interface. These two ice pump processes combine with the glacial flow of warm basal ice to rapidly flatten out any variations in the height of the ice-water interface: Europa's ice/water interface may be perfectly flat! If so, topography at Europa's surface can only be supported by variations in density of the shell or the strength of the brittle surface ice.

Single-interface Richtmyer-Meshkov turbulent mixing at the Los Alamos Vertical Shock Tube

DOE PAGES

Wilson, Brandon Merrill; Mejia Alvarez, Ricardo; Prestridge, Katherine Philomena

2016-04-12

We studied Mach number and initial conditions effects on Richtmyer–Meshkov (RM) mixing by the vertical shock tube (VST) at Los Alamos National Laboratory (LANL). At the VST, a perturbed stable light-to-heavy (air–SF 6, A=0.64) interface is impulsively accelerated with a shock wave to induce RM mixing. We investigate changes to both large and small scales of mixing caused by changing the incident Mach number (Ma=1.3 and 1.45) and the three-dimensional (3D) perturbations on the interface. Simultaneous density (quantitative planar laser-induced fluorescence (PLIF)) and velocity (particle image velocimetry (PIV)) measurements are used to characterize preshock initial conditions and the dynamic shockedmore » interface. Initial conditions and fluid properties are characterized before shock. Using two types of dynamic measurements, time series (N=5 realizations at ten locations) and statistics (N=100 realizations at a single location) of the density and velocity fields, we calculate several mixing quantities. Mix width, density-specific volume correlations, density–vorticity correlations, vorticity, enstrophy, strain, and instantaneous dissipation rate are examined at one downstream location. Results indicate that large-scale mixing, such as the mix width, is strongly dependent on Mach number, whereas small scales are strongly influenced by initial conditions. Lastly, the enstrophy and strain show focused mixing activity in the spike regions.« less

Design, economic and system considerations of large wind-driven generators

NASA Technical Reports Server (NTRS)

Jorgensen, G. E.; Lotker, M.; Meier, R. C.; Brierley, D.

1976-01-01

The increased search for alternative energy sources has lead to renewed interest and studies of large wind-driven generators. This paper presents the results and considerations of such an investigation. The paper emphasizes the concept selection of wind-driven generators, system optimization, control system design, safety aspects, economic viability on electric utility systems and potential electric system interfacing problems.

Simulating shock-bubble interactions at water-gelatin interfaces

NASA Astrophysics Data System (ADS)

Adami, Stefan; Kaiser, Jakob; Bermejo-Moreno, Ivan; Adams, Nikolaus

2016-11-01

Biomedical problems are often driven by fluid dynamics, as in vivo organisms are usually composed of or filled with fluids that (strongly) affected their physics. Additionally, fluid dynamical effects can be used to enhance certain phenomena or destroy organisms. As examples, we highlight the benign potential of shockwave-driven kidney-stone lithotripsy or sonoporation (acoustic cavitation of microbubbles) to improve drug delivery into cells. During the CTR SummerProgram 2016 we have performed axisymmetric three-phase simulations of a shock hitting a gas bubble in water near a gelatin interface mimicking the fundamental process during sonoporation. We used our multi-resolution finite volume method with sharp interface representation (level-set), WENO-5 shock capturing and interface scale-separation and compared the results with a diffuse-interface method. Qualitatively our simulation results agree well with the reference. Due to the interface treatment the pressure profiles are sharper in our simulations and bubble collapse dynamics are predicted at shorter time-scales. Validation with free-field collapse (Rayleigh collapse) shows very good agreement. The project leading to this application has received funding from the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (Grant agreement No 667483).

Linear stability of an active fluid interface

NASA Astrophysics Data System (ADS)

Nagilla, Amarender; Prabhakar, Ranganathan; Jadhav, Sameer

2018-02-01

Motivated by studies suggesting that the patterns exhibited by the collectively expanding fronts of thin cells during the closing of a wound [S. Mark et al., "Physical model of the dynamic instability in an expanding cell culture," Biophys. J. 98(3), 361-370 (2010)] and the shapes of single cells crawling on surfaces [A. C. Callan-Jones et al., "Viscous-fingering-like instability of cell fragments," Phys. Rev. Lett. 100(25), 258106 (2008)] are due to fingering instabilities, we investigate the stability of actively driven interfaces under the Hele-Shaw confinement. An initially radial interface between a pair of viscous fluids is driven by active agents. Surface tension and bending rigidity resist the deformation of the interface. A point source at the origin and a distributed source are also included to model the effects of injection or suction and growth or depletion, respectively. Linear stability analysis reveals that for any given initial radius of the interface, there are two key dimensionless driving rates that determine interfacial stability. We discuss stability regimes in a state space of these parameters and their implications for biological systems. An interesting finding is that an actively mobile interface is susceptible to the fingering instability irrespective of viscosity contrast.

Rarefaction-driven Rayleigh–Taylor instability. Part 2. Experiments and simulations in the nonlinear regime

DOE Office of Scientific and Technical Information (OSTI.GOV)

Morgan, R. V.; Cabot, W. H.; Greenough, J. A.

Experiments and large eddy simulation (LES) were performed to study the development of the Rayleigh–Taylor instability into the saturated, nonlinear regime, produced between two gases accelerated by a rarefaction wave. Single-mode two-dimensional, and single-mode three-dimensional initial perturbations were introduced on the diffuse interface between the two gases prior to acceleration. The rarefaction wave imparts a non-constant acceleration, and a time decreasing Atwood number,more » $$A=(\\unicode[STIX]{x1D70C}_{2}-\\unicode[STIX]{x1D70C}_{1})/(\\unicode[STIX]{x1D70C}_{2}+\\unicode[STIX]{x1D70C}_{1})$$, where$$\\unicode[STIX]{x1D70C}_{2}$$and$$\\unicode[STIX]{x1D70C}_{1}$$are the densities of the heavy and light gas, respectively. Experiments and simulations are presented for initial Atwood numbers of$A=0.49$$,$$A=0.63$$,$$A=0.82$$and$$A=0.94$$. Nominally two-dimensional (2-D) experiments (initiated with nearly 2-D perturbations) and 2-D simulations are observed to approach an intermediate-time velocity plateau that is in disagreement with the late-time velocity obtained from the incompressible model of Goncharov (Phys. Rev. Lett., vol. 88, 2002, 134502). Reacceleration from an intermediate velocity is observed for 2-D bubbles in large wavenumber,$$k=2\\unicode[STIX]{x03C0}/\\unicode[STIX]{x1D706}=0.247~\\text{mm}^{-1}$$, experiments and simulations, where$$\\unicode[STIX]{x1D706}$is the wavelength of the initial perturbation. At moderate Atwood numbers, the bubble and spike velocities approach larger values than those predicted by Goncharov’s model. These late-time velocity trends are predicted well by numerical simulations using the LLNL Miranda code, and by the 2009 model of Mikaelian (Phys. Fluids., vol. 21, 2009, 024103) that extends Layzer type models to variable acceleration and density. Large Atwood number experiments show a delayed roll up, and exhibit a free-fall like behaviour. Finally, experiments initiated with three-dimensional perturbations tend to agree better with models and a simulation using the LLNL Ares code initiated with an axisymmetric rather than Cartesian symmetry.« less

Rarefaction-driven Rayleigh–Taylor instability. Part 2. Experiments and simulations in the nonlinear regime

DOE PAGES

Morgan, R. V.; Cabot, W. H.; Greenough, J. A.; ...

2018-01-12

Experiments and large eddy simulation (LES) were performed to study the development of the Rayleigh–Taylor instability into the saturated, nonlinear regime, produced between two gases accelerated by a rarefaction wave. Single-mode two-dimensional, and single-mode three-dimensional initial perturbations were introduced on the diffuse interface between the two gases prior to acceleration. The rarefaction wave imparts a non-constant acceleration, and a time decreasing Atwood number,more » $$A=(\\unicode[STIX]{x1D70C}_{2}-\\unicode[STIX]{x1D70C}_{1})/(\\unicode[STIX]{x1D70C}_{2}+\\unicode[STIX]{x1D70C}_{1})$$, where$$\\unicode[STIX]{x1D70C}_{2}$$and$$\\unicode[STIX]{x1D70C}_{1}$$are the densities of the heavy and light gas, respectively. Experiments and simulations are presented for initial Atwood numbers of$A=0.49$$,$$A=0.63$$,$$A=0.82$$and$$A=0.94$$. Nominally two-dimensional (2-D) experiments (initiated with nearly 2-D perturbations) and 2-D simulations are observed to approach an intermediate-time velocity plateau that is in disagreement with the late-time velocity obtained from the incompressible model of Goncharov (Phys. Rev. Lett., vol. 88, 2002, 134502). Reacceleration from an intermediate velocity is observed for 2-D bubbles in large wavenumber,$$k=2\\unicode[STIX]{x03C0}/\\unicode[STIX]{x1D706}=0.247~\\text{mm}^{-1}$$, experiments and simulations, where$$\\unicode[STIX]{x1D706}$is the wavelength of the initial perturbation. At moderate Atwood numbers, the bubble and spike velocities approach larger values than those predicted by Goncharov’s model. These late-time velocity trends are predicted well by numerical simulations using the LLNL Miranda code, and by the 2009 model of Mikaelian (Phys. Fluids., vol. 21, 2009, 024103) that extends Layzer type models to variable acceleration and density. Large Atwood number experiments show a delayed roll up, and exhibit a free-fall like behaviour. Finally, experiments initiated with three-dimensional perturbations tend to agree better with models and a simulation using the LLNL Ares code initiated with an axisymmetric rather than Cartesian symmetry.« less

Properties of convective oxygen and silicon burning shells in supernova progenitors

NASA Astrophysics Data System (ADS)

Collins, Christine; Müller, Bernhard; Heger, Alexander

2018-01-01

Recent 3D simulations have suggested that convective seed perturbations from shell burning can play an important role in triggering neutrino-driven supernova explosions. Since isolated simulations cannot determine whether this perturbation-aided mechanism is of general relevance across the progenitor mass range, we here investigate the pertinent properties of convective oxygen and silicon burning shells in a broad range of pre-supernova stellar evolution models. We find that conditions for perturbation-aided explosions are most favourable in the extended oxygen shells of progenitors between about 16 and 26 solar masses, which exhibit large-scale convective overturn with high convective Mach numbers. Although the highest convective Mach numbers of up to 0.3 are reached in the oxygen shells of low-mass progenitors, convection is typically dominated by small-scale modes in these shells, which implies a more modest role of initial perturbations in the explosion mechanism. Convective silicon burning rarely provides the high Mach numbers and large-scale perturbations required for perturbation-aided explosions. We also find that about 40 per cent of progenitors between 16 and 26 solar masses exhibit simultaneous oxygen and neon burning in the same convection zone as a result of a shell merger shortly before collapse.

Streamer properties and associated x-rays in perturbed air

NASA Astrophysics Data System (ADS)

Köhn, C.; Chanrion, O.; Babich, L. P.; Neubert, T.

2018-01-01

Streamers are ionization waves in electric discharges. One of the key ingredients of streamer propagation is an ambient gas that serves as a source of free electrons. Here, we explore the dependence of streamer dynamics on different spatial distributions of ambient air molecules. We vary the spatial profile of air parallel and perpendicular to the ambient electric field. We consider local sinusoidal perturbations of 5%-100%, as induced from discharge shock waves. We use a cylindrically symmetric particle-in-cell code to simulate the evolution of bidirectional streamers and compare the electron density, electric field, streamer velocity and electron energy of streamers in uniform air and in perturbed air. In all considered cases, the motion is driven along in decreasing air density and damped along increasing air density. Perturbations of at most 5%-10% change the velocity differences by up to approximately 40%. Perturbations perpendicular to the electric field additionally squeeze or branch streamers. Air variations can thus partly explain the difference of velocities and morphologies of streamer discharges. In cases with large perturbations, electrons gain energies of up to 30 keV compared to 100 eV in uniformly distributed air. For such perturbations parallel to the ambient electric field, we see the spontaneous initiation of a negative streamer; for perpendicular perturbations, x-rays with energies of up to 20 keV are emitted within 0.17 ns.

A comparison of finite element and analytic models of acoustic scattering from rough poroelastic interfaces.

PubMed

Bonomo, Anthony L; Isakson, Marcia J; Chotiros, Nicholas P

2015-04-01

The finite element method is used to model acoustic scattering from rough poroelastic surfaces. Both monostatic and bistatic scattering strengths are calculated and compared with three analytic models: Perturbation theory, the Kirchhoff approximation, and the small-slope approximation. It is found that the small-slope approximation is in very close agreement with the finite element results for all cases studied and that perturbation theory and the Kirchhoff approximation can be considered valid in those instances where their predictions match those given by the small-slope approximation.

Interface stability in a slowly rotating low-gravity tank Theory

NASA Technical Reports Server (NTRS)

Gans, R. F.; Leslie, F. W.

1986-01-01

The equilibrium configuration of a bubble in a rotating liquid confined by flat axial boundaries (baffles) is found. The maximum baffle spacing assuring bubble confinement is bounded from above by the natural length of a bubble in an infinite medium under the same conditions. Effects of nonzero contact angle are minimal. The problem of dynamic stability is posed. It can be solved in the limit of rapid rotation, for which the bubble is a long cylinder. Instability is to axisymmetric perturbations; nonaxisymmetric perturbations are stable. The stability criterion agrees with earlier results.

Experimental study of an isochorically heated heterogeneous interface. A progress report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fernandez, Juan Carlos

2015-08-20

Outline of the presentation: Studying possible mix / interface motion between heterogeneous low/high Z interfaces driven by 2-fluid or kinetic plasma effects (Heated to few eV, Sharp (sub µm) interface); Isochoric heating to initialize interface done with Al quasimonoenergetic ion beams on Trident; Have measured isochoric heating in individual materials intended for compound targets; Fielded experiments on Trident to measure interface motion (Gold-diamond, tin-aluminium); Measured heated-sample temperature with streaked optical pyrometry (SOP) (UT Austin led (research contract), SOP tests → heating uniformity Vs thickness on Al foils. Results are being analyzed.

Laser-driven planar Rayleigh-Taylor instability experiments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Glendinning, S.G.; Weber, S.V.; Bell, P.

1992-08-24

We have performed a series of experiments on the Nova Laser Facility to examine the hydrodynamic behavior of directly driven planar foils with initial perturbations of varying wavelength. The foils were accelerated with a single, frequency doubled, smoothed and temporally shaped laser beam at 0.8{times}10{sup 14} W/cm{sup 2}. The experiments are in good agreement with numerical simulations using the computer codes LASNEX and ORCHID which show growth rates reduced to about 70% of classical for this nonlinear regime.

Turbulence, transport, and zonal flows in the Madison symmetric torus reversed-field pinch

NASA Astrophysics Data System (ADS)

Williams, Z. R.; Pueschel, M. J.; Terry, P. W.; Hauff, T.

2017-12-01

The robustness and the effect of zonal flows in trapped electron mode (TEM) turbulence and Ion Temperature Gradient (ITG) turbulence in the reversed-field pinch (RFP) are investigated from numerical solutions of the gyrokinetic equations with and without magnetic external perturbations introduced to model tearing modes. For simulations without external magnetic field perturbations, zonal flows produce a much larger reduction of transport for the density-gradient-driven TEM turbulence than they do for the ITG turbulence. Zonal flows are studied in detail to understand the nature of their strong excitation in the RFP and to gain insight into the key differences between the TEM- and ITG-driven regimes. The zonal flow residuals are significantly larger in the RFP than in tokamak geometry due to the low safety factor. Collisionality is seen to play a significant role in the TEM zonal flow regulation through the different responses of the linear growth rate and the size of the Dimits shift to collisionality, while affecting the ITG only minimally. A secondary instability analysis reveals that the TEM turbulence drives zonal flows at a rate that is twice that of the ITG turbulence. In addition to interfering with zonal flows, the magnetic perturbations are found to obviate an energy scaling relation for fast particles.

Interactions between semiconductor nanowires and living cells.

PubMed

Prinz, Christelle N

2015-06-17

Semiconductor nanowires are increasingly used for biological applications and their small dimensions make them a promising tool for sensing and manipulating cells with minimal perturbation. In order to interface cells with nanowires in a controlled fashion, it is essential to understand the interactions between nanowires and living cells. The present paper reviews current progress in the understanding of these interactions, with knowledge gathered from studies where living cells were interfaced with vertical nanowire arrays. The effect of nanowires on cells is reported in terms of viability, cell-nanowire interface morphology, cell behavior, changes in gene expression as well as cellular stress markers. Unexplored issues and unanswered questions are discussed.

Diagnosis of dynamic process over rainband of landfall typhoon

NASA Astrophysics Data System (ADS)

Ran, Ling-Kun; Yang, Wen-Xia; Chu, Yan-Li

2010-07-01

This paper introduces a new physical parameter — thermodynamic shear advection parameter combining the perturbation vertical component of convective vorticity vector with the coupling of horizontal divergence perturbation and vertical gradient of general potential temperature perturbation. For a heavy-rainfall event resulting from the landfall typhoon 'Wipha', the parameter is calculated by using National Centres for Enviromental Prediction/National Centre for Atmospheric Research global final analysis data. The results showed that the parameter corresponds to the observed 6 h accumulative rainband since it is capable of catching hold of the dynamic and thermodynamic disturbance in the lower troposphere over the observed rainband. Before the typhoon landed, the advection of the parameter by basic-state flow and the coupling of general potential temperature perturbation with curl of Coriolis force perturbation are the primary dynamic processes which are responsible for the local change of the parameter. After the typhoon landed, the disturbance is mainly driven by the combination of five primary dynamic processes. The advection of the parameter by basic-state flow was weakened after the typhoon landed.

High Throughput Screening of Toxicity Pathways Perturbed by Environmental Chemicals

EPA Science Inventory

Toxicology, a field largely unchanged over the past several decades, is undergoing a significant transformation driven by a number of forces – the increasing number of chemicals needing assessment, changing legal requirements, advances in biology and computer science, and concern...

Passive scalars chaotic dynamics induced by two vortices in a two-layer geophysical flow with shear and rotation

NASA Astrophysics Data System (ADS)

Ryzhov, Eugene

2015-11-01

Vortex motion in shear flows is of great interest from the point of view of nonlinear science, and also as an applied problem to predict the evolution of vortices in nature. Considering applications to the ocean and atmosphere, it is well-known that these media are significantly stratified. The simplest way to take stratification into account is to deal with a two-layer flow. In this case, vortices perturb the interface, and consequently, the perturbed interface transits the vortex influences from one layer to another. Our aim is to investigate the dynamics of two point vortices in an unbounded domain where a shear and rotation are imposed as the leading order influence from some generalized perturbation. The two vortices are arranged within the bottom layer, but an emphasis is on the upper-layer fluid particle motion. Point vortices induce singular velocity fields in the layer they belong to, however, in the other layers of a multi-layer flow, they induce regular velocity fields. The main feature is that singular velocity fields prohibit irregular dynamics in the vicinity of the singular points, but regular velocity fields, provided optimal conditions, permit irregular dynamics to extend almost in every point of the corresponding phase space.

A multispacecraft event study of Pc5 ultralow-frequency waves in the magnetosphere and their external drivers

DOE PAGES

Wang, Chih-Ping; Thorne, Richard; Liu, Terry Z.; ...

2017-05-09

We investigate a quiet time event of magnetospheric Pc5 ultralow-frequency (ULF) waves and their likely external drivers using multiple spacecraft observations. Enhancements of electric and magnetic field perturbations in two narrow frequency bands, 1.5–2 mHz and 3.5–4 mHz, were observed over a large radial distance range from r ~ 5 to 11 RE. During the first half of this event, perturbations were mainly observed in the transverse components and only in the 3.5–4 mHz band. In comparison, enhancements were stronger during the second half in both transverse and compressional components and in both frequency bands. No indication of field linemore » resonances was found for these magnetic field perturbations. Perturbations in these two bands were also observed in the magnetosheath, but not in the solar wind dynamic pressure perturbations. For the first interval, good correlations between the flow perturbations in the magnetosphere and magnetosheath and an indirect signature for Kelvin-Helmholtz (K-H) vortices suggest K-H surface waves as the driver. For the second interval, good correlations are found between the magnetosheath dynamic pressure perturbations, magnetopause deformation, and magnetospheric waves, all in good correspondence to interplanetary magnetic field (IMF) discontinuities. The characteristics of these perturbations can be explained by being driven by foreshock perturbations resulting from these IMF discontinuities. This event shows that even during quiet periods, K-H-unstable magnetopause and ion foreshock perturbations can combine to create a highly dynamic magnetospheric ULF wave environment« less

A multispacecraft event study of Pc5 ultralow-frequency waves in the magnetosphere and their external drivers

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Chih-Ping; Thorne, Richard; Liu, Terry Z.

We investigate a quiet time event of magnetospheric Pc5 ultralow-frequency (ULF) waves and their likely external drivers using multiple spacecraft observations. Enhancements of electric and magnetic field perturbations in two narrow frequency bands, 1.5–2 mHz and 3.5–4 mHz, were observed over a large radial distance range from r ~ 5 to 11 RE. During the first half of this event, perturbations were mainly observed in the transverse components and only in the 3.5–4 mHz band. In comparison, enhancements were stronger during the second half in both transverse and compressional components and in both frequency bands. No indication of field linemore » resonances was found for these magnetic field perturbations. Perturbations in these two bands were also observed in the magnetosheath, but not in the solar wind dynamic pressure perturbations. For the first interval, good correlations between the flow perturbations in the magnetosphere and magnetosheath and an indirect signature for Kelvin-Helmholtz (K-H) vortices suggest K-H surface waves as the driver. For the second interval, good correlations are found between the magnetosheath dynamic pressure perturbations, magnetopause deformation, and magnetospheric waves, all in good correspondence to interplanetary magnetic field (IMF) discontinuities. The characteristics of these perturbations can be explained by being driven by foreshock perturbations resulting from these IMF discontinuities. This event shows that even during quiet periods, K-H-unstable magnetopause and ion foreshock perturbations can combine to create a highly dynamic magnetospheric ULF wave environment« less

Dynamic stabilization of classical Rayleigh-Taylor instability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Piriz, A. R.; Piriz, S. A.; Tahir, N. A.

2011-09-15

Dynamic stabilization of classical Rayleigh-Taylor instability is studied by modeling the interface vibration with the simplest possible wave form, namely, a sequence of Dirac deltas. As expected, stabilization results to be impossible. However, in contradiction to previously reported results obtained with a sinusoidal driving, it is found that in general the perturbation amplitude is larger than in the classical case. Therefore, no beneficial effect can be obtained from the vertical vibration of a Rayleigh-Taylor unstable interface between two ideal fluids.

Interface conditions for domain decomposition with radical grid refinement

NASA Technical Reports Server (NTRS)

Scroggs, Jeffrey S.

1991-01-01

Interface conditions for coupling the domains in a physically motivated domain decomposition method are discussed. The domain decomposition is based on an asymptotic-induced method for the numerical solution of hyperbolic conservation laws with small viscosity. The method consists of multiple stages. The first stage is to obtain a first approximation using a first-order method, such as the Godunov scheme. Subsequent stages of the method involve solving internal-layer problem via a domain decomposition. The method is derived and justified via singular perturbation techniques.

Tunneling anisotropic magnetoresistance driven by resonant surface states: first-principles calculations on an Fe(001) surface.

PubMed

Chantis, Athanasios N; Belashchenko, Kirill D; Tsymbal, Evgeny Y; van Schilfgaarde, Mark

2007-01-26

Fully relativistic first-principles calculations of the Fe(001) surface demonstrate that resonant surface (interface) states may produce sizable tunneling anisotropic magnetoresistance in magnetic tunnel junctions with a single magnetic electrode. The effect is driven by the spin-orbit coupling. It shifts the resonant surface band via the Rashba effect when the magnetization direction changes. We find that spin-flip scattering at the interface is controlled not only by the strength of the spin-orbit coupling, but depends strongly on the intrinsic width of the resonant surface states.

Driven similarity renormalization group for excited states: A state-averaged perturbation theory

NASA Astrophysics Data System (ADS)

Li, Chenyang; Evangelista, Francesco A.

2018-03-01

The multireference driven similarity renormalization group (MRDSRG) approach [C. Li and F. A. Evangelista, J. Chem. Theory Comput. 11, 2097 (2015)] is generalized to treat quasi-degenerate electronic excited states. The new scheme, termed state-averaged (SA) MRDSRG, is a state-universal approach that considers an ensemble of quasi-degenerate states on an equal footing. Using the SA-MRDSRG framework, we implement second- (SA-DSRG-PT2) and third-order (SA-DSRG-PT3) perturbation theories. These perturbation theories can treat a manifold of near-degenerate states at the cost of a single state-specific computation. At the same time, they have several desirable properties: (1) they are intruder-free and size-extensive, (2) their energy expressions can be evaluated non-iteratively and require at most the three-body density cumulant of the reference states, and (3) the reference states are allowed to relax in the presence of dynamical correlation effects. Numerical benchmarks on the potential energy surfaces of lithium fluoride, ammonia, and the penta-2,4-dieniminium cation reveal that the SA-DSRG-PT2 method yields results with accuracy similar to that of other second-order quasi-degenerate perturbation theories. The SA-DSRG-PT3 results are instead consistent with those from multireference configuration interaction with singles and doubles (MRCISD). Finally, we compute the vertical excitation energies of (E,E)-1,3,5,7-octatetraene. The ordering of the lowest three states is predicted to be 2 1Ag-<1 1Bu+<1 1Bu- by both SA-DSRG-PT2 and SA-DSRG-PT3, in accordance with MRCISD plus Davidson correction.

Supernova simulations from a 3D progenitor model - Impact of perturbations and evolution of explosion properties

NASA Astrophysics Data System (ADS)

Müller, Bernhard; Melson, Tobias; Heger, Alexander; Janka, Hans-Thomas

2017-11-01

We study the impact of large-scale perturbations from convective shell burning on the core-collapse supernova explosion mechanism using 3D multigroup neutrino hydrodynamics simulations of an 18M⊙ progenitor. Seed asphericities in the O shell, obtained from a recent 3D model of O shell burning, help trigger a neutrino-driven explosion 330 ms after bounce whereas the shock is not revived in a model based on a spherically symmetric progenitor for at least another 300 ms. We tentatively infer a reduction of the critical luminosity for shock revival by ˜ 20 {per cent} due to pre-collapse perturbations. This indicates that convective seed perturbations play an important role in the explosion mechanism in some progenitors. We follow the evolution of the 18M⊙ model into the explosion phase for more than 2 s and find that the cycle of accretion and mass ejection is still ongoing at this stage. With a preliminary value of 7.7 × 1050 erg for the diagnostic explosion energy, a baryonic neutron star mass of 1.85M⊙, a neutron star kick of ˜ 600 km s^{-1} and a neutron star spin period of ˜ 20 ms at the end of the simulation, the explosion and remnant properties are slightly atypical, but still lie comfortably within the observed distribution. Although more refined simulations and a larger survey of progenitors are still called for, this suggests that a solution to the problem of shock revival and explosion energies in the ballpark of observations is within reach for neutrino-driven explosions in 3D.

Gauge-flation confronted with Planck

DOE Office of Scientific and Technical Information (OSTI.GOV)

Namba, Ryo; Dimastrogiovanni, Emanuela; Peloso, Marco, E-mail: namba@physics.umn.edu, E-mail: ema@physics.umn.edu, E-mail: peloso@physics.umn.edu

2013-11-01

Gauge-flation is a recently proposed model in which inflation is driven solely by a non-Abelian gauge field thanks to a specific higher order derivative operator. The nature of the operator is such that it does not introduce ghosts. We compute the cosmological scalar and tensor perturbations for this model, improving over an existing computation. We then confront these results with the Planck data. The model is characterized by the quantity γ ≡ g{sup 2}Q{sup 2}/H{sup 2} (where g is the gauge coupling constant, Q the vector vev, and H the Hubble rate). For γ < 2, the scalar perturbations show a strongmore » tachyonic instability. In the stable region, the scalar power spectrum n{sub s} is too low at small γ, while the tensor-to-scalar ratio r is too high at large γ. No value of γ leads to acceptable values for n{sub s} and r, and so the model is ruled out by the CMB data. The same behavior with γ was obtained in Chromo-natural inflation, a model in which inflation is driven by a pseudo-scalar coupled to a non-Abelian gauge field. When the pseudo-scalar can be integrated out, one recovers the model of Gauge-flation plus corrections. It was shown that this identification is very accurate at the background level, but differences emerged in the literature concerning the perturbations of the two models. On the contrary, our results show that the analogy between the two models continues to be accurate also at the perturbative level.« less

Navigating the Neural Space in Search of the Neural Code.

PubMed

Jazayeri, Mehrdad; Afraz, Arash

2017-03-08

The advent of powerful perturbation tools, such as optogenetics, has created new frontiers for probing causal dependencies in neural and behavioral states. These approaches have significantly enhanced the ability to characterize the contribution of different cells and circuits to neural function in health and disease. They have shifted the emphasis of research toward causal interrogations and increased the demand for more precise and powerful tools to control and manipulate neural activity. Here, we clarify the conditions under which measurements and perturbations support causal inferences. We note that the brain functions at multiple scales and that causal dependencies may be best inferred with perturbation tools that interface with the system at the appropriate scale. Finally, we develop a geometric framework to facilitate the interpretation of causal experiments when brain perturbations do or do not respect the intrinsic patterns of brain activity. We describe the challenges and opportunities of applying perturbations in the presence of dynamics, and we close with a general perspective on navigating the activity space of neurons in the search for neural codes. Copyright © 2017 Elsevier Inc. All rights reserved.

Learning-induced Dependence of Neuronal Activity in Primary Motor Cortex on Motor Task Condition.

PubMed

Cai, X; Shimansky, Y; He, Jiping

2005-01-01

A brain-computer interface (BCI) system such as a cortically controlled robotic arm must have a capacity of adjusting its function to a specific environmental condition. We studied this capacity in non-human primates based on chronic multi-electrode recording from the primary motor cortex of a monkey during the animal's performance of a center-out 3D reaching task and adaptation to external force perturbations. The main condition-related feature of motor cortical activity observed before the onset of force perturbation was a phasic raise of activity immediately before the perturbation onset. This feature was observed during a series of perturbation trials, but were absent under no perturbations. After adaptation has been completed, it usually was taking the subject only one trial to recognize a change in the condition to switch the neuronal activity accordingly. These condition-dependent features of neuronal activity can be used by a BCI for recognizing a change in the environmental condition and making corresponding adjustments, which requires that the BCI-based control system possess such advanced properties of the neural motor control system as capacity to learn and adapt.

Floating rGO-based black membranes for solar driven sterilization.

PubMed

Zhang, Yao; Zhao, Dengwu; Yu, Fan; Yang, Chao; Lou, Jinwei; Liu, Yanming; Chen, Yingying; Wang, Zhongyong; Tao, Peng; Shang, Wen; Wu, Jianbo; Song, Chengyi; Deng, Tao

2017-12-14

This paper presents a new steam sterilization approach that uses a solar-driven evaporation system at the water/air interface. Compared to the conventional solar autoclave, this new steam sterilization approach via interfacial evaporation requires no complex system design to bear high steam pressure. In such a system, a reduced graphene oxide/polytetrafluoroethylene composite membrane floating at the water/air interface serves as a light-to-heat conversion medium to harvest and convert incident solar light into localized heat. Such localized heat raises the temperature of the membrane substantially and helps generate steam with a temperature higher than 120 °C. A sterilization device that takes advantage of the interfacial solar-driven evaporation system was built and its successful sterilization capability was demonstrated through both chemical and biological sterilization tests. The interfacial evaporation-based solar driven sterilization approach offers a potential low cost solution to meet the need for sterilization in undeveloped areas that lack electrical power but have ample solar radiation.

Influence of strong perturbations on wall-bounded flows

NASA Astrophysics Data System (ADS)

Buxton, O. R. H.; Ewenz Rocher, M.; Rodríguez-López, E.

2018-01-01

Single-point hot-wire measurements are made downstream of a series of spanwise repeating obstacles that are used to generate an artificially thick turbulent boundary layer. The measurements are made in the near field, in which the turbulent boundary layer is beginning to develop from the wall-bounded wakes of the obstacles. The recent paper of Rodríguez-López et al. [E. Rodríguez-López et al., Phys. Rev. Fluids 1, 074401 (2016), 10.1103/PhysRevFluids.1.074401] broadly categorized the mechanisms by which canonical turbulent boundary layers eventually develop from wall-bounded wakes into two distinct mechanisms, the wall-driven and wake-driven mechanisms. In the present work we attempt to identify the geometric parameters of tripping arrays that trigger these two mechanisms by examining the spectra of the streamwise velocity fluctuations and the intermittent outer region of the flow. Using a definition reliant upon the magnitude of the velocity fluctuations, an intermittency function is devised that can discriminate between turbulent and nonturbulent flow. These results are presented along with the spectra in order to try to ascertain which aspects of a trip's geometry are more likely to favor the wall-driven or wake-driven mechanism. The geometrical aspects of the trips tested are the aspect ratio, the total blockage, and the blockage at the wall. The results indicate that the presence, or not, of perforations is the most significant factor in affecting the flow downstream. The bleed of fluid through the perforations reenergizes the mean recirculation and leads to a narrower intermittent region with a more regular turbulent-nonturbulent interface. The near-wall turbulent motions are found to recover quickly downstream of all of the trips with a wall blockage of 50%, but a clear influence of the outer fluctuations, generated by the tip vortices of the trips, is observed in the near-wall region for the high total blockage trips. The trip with 100% wall blockage is found to modify the nature of the inner-wall peak of turbulent kinetic energy.

Moffatt eddies at an interface

NASA Astrophysics Data System (ADS)

Shtern, Vladimir

2014-12-01

It is shown that an infinite set of eddies can develop near the interface-wall intersection in a two-fluid flow. A striking feature is that the eddy occurrence depends on from what side of the interface the flow is driven. In air-water flows where the viscosity ratio is 0.018, the eddies develop if a driving source is located on (i) the air side for , (ii) any side for , and (iii) the water side for , where is the upper interface-wall angle.

Mapping crystal defects with a digital scanning ultramicroscope

NASA Astrophysics Data System (ADS)

Springer, John M., Jr.; Silberman, Enrique; Kroes, Roger L.; Reiss, Don

1991-12-01

A computer controlled scanning ultramicroscope has been built to assist in the characterization of transparent crystals. The device measures the scattering of a focused He-Ne laser beam by crystalline defects. As an XYZ translation table moves the crystal under the ultramicroscope, the scattered light is measured by a photodetector whose output is digitized and recorded. From this data, contour maps or 3-D perspective plots of the scattering regions of the crystal can be generated to assist in finding patterns of defects which might be correlated with perturbations in the growth process. The verified resolution of the present instrument is about 1 micrometers , which is limited by the minimum step of the stepper-motor driven translation stages, optical diffraction effects, and the sensitivity of the detector at the laser light frequency. The instrument was used to build a database of defects patterns in commercial laboratory grown triglycine sulphate (TGS) crystals, and to map defects in a TGS crystal grown from aqueous solution during the flight of Spacelab 3. This crystal shows indications of a reduction both in the generation of defects at the seed-new growth interface and in their propagation into the new crystal.

Mapping crystal defects with a digital scanning ultramicroscope

NASA Astrophysics Data System (ADS)

Springer, J. M.; Silberman, E.; Kroes, Roger; Reiss, D.

A computer controlled scanning ultramicroscope has been built to assist in the characterization of transparent crystals. The device measures the scattering of a focused He-Ne laser beam by crystalline defects. As an XYZ translation table moves the crystal under the ultramicroscope, the scattered light is measured by a photodetector whose output is digitized and recorded. From this data, contour maps or three dimensional perspective plots of the scattering regions of the crystal can be generated to assist in finding patterns of defects which might be correlated with perturbations in the growth process. The verified resolution of the present instrument is about 1 micrometer, which is limited by the minimum step of the stepper-motor driven translation stages, optical diffraction effects and the sensitivity of the detector at the laser light frequency. The instrument was used to build a database of defects patterns in commercial laboratory grown triglycine sulphate (TGS) crystals, and to map defects in a TGS crystal grown from aqueous solution during the flight of Spacelab 3. This crystal shows indications of a reduction both in the generation of defects at the seed-new growth interface and in their propagation into the new crystal.

Tritium migration to the surfaces of Type 316 stainless steel; aluminum 6061; and oxygen-free, high-conductivity copper

DOE PAGES

Sharpe, M.; Shmayda, W. T.; Schroder, W. U.

2016-05-25

The migration of tritium to the surfaces of aluminum 6061, oxygen-free, high-conductivity copper (OFHC), and stainless-steel 316 from the bulk metal was studied using low-pressure Tonks–Langmuir argon plasma. The plasma is shown to be effective at removing tritium from metal surfaces in a controlled manner. Tritium is removed in decreasing quantities with successive plasma exposures, which suggests a depletion of the surface and near-surface tritium inventories. A diffusion model was developed to predict tritium migration from the bulk and its accumulation in the water layers present on the metal surface. The model reproduces the rate of tritium re-growth on themore » surface for all three metals and can be used to calculate the triton solubility in the water layers present on metal surfaces. The ratio of surface-to-bulk solubilities at the water-layer/bulk-metal interface uniquely determines the concentration ratio between these two media. Removing the tritium-rich water layers induces tritium to migrate from the bulk to the surface. Furthermore, this process is driven by a concentration gradient that develops in the bulk because of the perturbation on the surface.« less

Mapping crystal defects with a digital scanning ultramicroscope

NASA Technical Reports Server (NTRS)

Springer, J. M.; Silberman, E.; Kroes, Roger; Reiss, D.

1991-01-01

A computer controlled scanning ultramicroscope has been built to assist in the characterization of transparent crystals. The device measures the scattering of a focused He-Ne laser beam by crystalline defects. As an XYZ translation table moves the crystal under the ultramicroscope, the scattered light is measured by a photodetector whose output is digitized and recorded. From this data, contour maps or three dimensional perspective plots of the scattering regions of the crystal can be generated to assist in finding patterns of defects which might be correlated with perturbations in the growth process. The verified resolution of the present instrument is about 1 micrometer, which is limited by the minimum step of the stepper-motor driven translation stages, optical diffraction effects and the sensitivity of the detector at the laser light frequency. The instrument was used to build a database of defects patterns in commercial laboratory grown triglycine sulphate (TGS) crystals, and to map defects in a TGS crystal grown from aqueous solution during the flight of Spacelab 3. This crystal shows indications of a reduction both in the generation of defects at the seed-new growth interface and in their propagation into the new crystal.

Long-wave-instability-induced pattern formation in an evaporating sessile or pendent liquid layer

NASA Astrophysics Data System (ADS)

Wei, Tao; Duan, Fei

2018-03-01

We investigate the nonlinear dynamics and stability of an evaporating liquid layer subject to vapor recoil, capillarity, thermocapillarity, ambient cooling, viscosity, and negative or positive gravity combined with buoyancy effects in the lubrication approximation. Using linear theory, we identify the mechanisms of finite-time rupture, independent of thermocapillarity and direction of gravity, and predict the effective growth rate of an interfacial perturbation which reveals competition among the mechanisms. A stability diagram is predicted for the onset of long-wave (LW) evaporative convection. In the two-dimensional simulation, we observe well-defined capillary ridges on both sides of the valley under positive gravity and main and secondary droplets under negative gravity, while a ridge can be trapped in a large-scale drained region in both cases. Neglecting the other non-Boussinesq effects, buoyancy does not have a significant influence on interfacial evolution and rupture time but makes contributions to the evaporation-driven convection and heat transfer. The average Nusselt number is found to increase with a stronger buoyancy effect. The flow field and interface profile jointly manifest the LW Marangoni-Rayleigh-Bénard convection under positive gravity and the LW Marangoni convection under negative gravity. In the three-dimensional simulation of moderate evaporation with a random perturbation, the rupture patterns are characterized by irregular ridge networks with distinct height scales for positive and negative gravity. A variety of interfacial and internal dynamics are displayed, depending on evaporation conditions, gravity, Marangoni effect, and ambient cooling. Reasonable agreement is found between the present results and the reported experiments and simulations. The concept of dissipative compacton also sheds light on the properties of interfacial fractalization.

Photonic Crystals from Order to Disorder: Perturbative Methods in Nanophotonics

ScienceCinema

Johnson, Steven G. [MIT, Cambridge, Massachusetts, United States

2017-12-09

Photonic crystals are periodic dielectric structures in which light can behave much differently than in a homogeneous medium. This talk gives an overview of some of the interesting properties and applications of these media, from switching in subwavelength microcavities to slow-light devices, to guiding light in air. However, some of the most interesting and challenging problems occur when the periodicity is disturbed, either by design or by inevitable fabrication imperfections. The talk focuses especially on small perturbations that have important effects, from slow-light tapers to surface roughness disorder, and will show that many classic perturbative approaches must be rethought for high-contrast nanophotonics. The combination of strong periodicity with large field discontinuities at interfaces causes standard methods to fail, but succumbs to new generalizations, while some problems remain open.

Experimental Study of the Richtmyer-Meshkov Instability of Incompressible Fluids

NASA Technical Reports Server (NTRS)

Niederhaus, Charles; Jacobs, Jeffrey W.

2002-01-01

The Richtmyer-Meshkov instability of a low Atwood number, miscible, two-liquid system is investigated experimentally. The initially stratified fluids are contained within a rectangular tank mounted to a sled that rides on a vertical set of rails. The instability is generated by dropping the sled onto a coil spring, producing a nearly impulsive upward acceleration. The subsequent freefall that occurs as the container travels upward and then downward on the rails allows the instability to evolve in the absence of gravity. The interface separating the two liquids initially has a well-defined, sinusoidal perturbation that quickly inverts and then grows in amplitude after undergoing the impulsive acceleration. Disturbance amplitudes are measured and compared to theoretical predictions. Linear stability theory gives excellent agreement with the measured initial growth rate, a(sub 0), for single-mode perturbations with the predicted amplitudes differing by less than 10% from experimental measurements up to a nondimensional time ka(sub 0)t = 0.7, where k is the wavenumber. Linear stability theory also provides excellent agreement for the individual mode amplitudes of multi-mode initial perturbations up until the interface becomes multi-valued. Comparison with previously published weakly nonlinear single-mode models shows good agreement up to ka(sub 0)t = 3, while published nonlinear single-mode models provide good agreement up to ka(sub 0)t = 30. The effects of Reynolds number on the vortex core evolution and overall growth rate of the interface are also investigated. Measurements of the overall amplitude are found to be unaffected by the Reynolds number for the range of values studied here. However, experiments carried out at lower values of Reynolds numbers were found to have decreased vortex core rotation rates. In addition, an instability in the vortex cores is observed.

Cellular interface morphologies in directional solidification. III - The effects of heat transfer and solid diffusivity

NASA Technical Reports Server (NTRS)

Ungar, Lyle H.; Bennett, Mark J.; Brown, Robert A.

1985-01-01

The shape and stability of two-dimensional finite-amplitude cellular interfaces arising during directional solidification are compared for several solidification models that account differently for latent heat released at the interface, unequal thermal conductivities of melt and solid, and solute diffusivity in the solid. Finite-element analysis and computer-implemented perturbation methods are used to analyze the families of steadily growing cellular forms that evolve from the planar state. In all models a secondary bifurcation between different families of finite-amplitude cells exists that halves the spatial wavelength of the stable interface. The quantitative location of this transition is very dependent on the details of the model. Large amounts of solute diffusion in the solid retard the growth of large-amplitude cells.

ON THE MIGRATION OF JUPITER AND SATURN: CONSTRAINTS FROM LINEAR MODELS OF SECULAR RESONANT COUPLING WITH THE TERRESTRIAL PLANETS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Agnor, Craig B.; Lin, D. N. C.

We examine how the late divergent migration of Jupiter and Saturn may have perturbed the terrestrial planets. Using a modified secular model we have identified six secular resonances between the {nu}{sub 5} frequency of Jupiter and Saturn and the four apsidal eigenfrequencies of the terrestrial planets (g{sub 1-4}). We derive analytic upper limits on the eccentricity and orbital migration timescale of Jupiter and Saturn when these resonances were encountered to avoid perturbing the eccentricities of the terrestrial planets to values larger than the observed ones. Because of the small amplitudes of the j = 2, 3 terrestrial eigenmodes the g{submore » 2} - {nu}{sub 5} and g{sub 3} - {nu}{sub 5} resonances provide the strongest constraints on giant planet migration. If Jupiter and Saturn migrated with eccentricities comparable to their present-day values, smooth migration with exponential timescales characteristic of planetesimal-driven migration ({tau} {approx} 5-10 Myr) would have perturbed the eccentricities of the terrestrial planets to values greatly exceeding the observed ones. This excitation may be mitigated if the eccentricity of Jupiter was small during the migration epoch, migration was very rapid (e.g., {tau} {approx}< 0.5 Myr perhaps via planet-planet scattering or instability-driven migration) or the observed small eccentricity amplitudes of the j = 2, 3 terrestrial modes result from low probability cancellation of several large amplitude contributions. Results of orbital integrations show that very short migration timescales ({tau} < 0.5 Myr), characteristic of instability-driven migration, may also perturb the terrestrial planets' eccentricities by amounts comparable to their observed values. We discuss the implications of these constraints for the relative timing of terrestrial planet formation, giant planet migration, and the origin of the so-called Late Heavy Bombardment of the Moon 3.9 {+-} 0.1 Ga ago. We suggest that the simplest way to satisfy these dynamical constraints may be for the bulk of any giant planet migration to be complete in the first 30-100 Myr of solar system history.« less

Spin Current Noise of the Spin Seebeck Effect and Spin Pumping

NASA Astrophysics Data System (ADS)

Matsuo, M.; Ohnuma, Y.; Kato, T.; Maekawa, S.

2018-01-01

We theoretically investigate the fluctuation of a pure spin current induced by the spin Seebeck effect and spin pumping in a normal-metal-(NM-)ferromagnet(FM) bilayer system. Starting with a simple ferromagnet-insulator-(FI-)NM interface model with both spin-conserving and non-spin-conserving processes, we derive general expressions of the spin current and the spin-current noise at the interface within second-order perturbation of the FI-NM coupling strength, and estimate them for a yttrium-iron-garnet-platinum interface. We show that the spin-current noise can be used to determine the effective spin carried by a magnon modified by the non-spin-conserving process at the interface. In addition, we show that it provides information on the effective spin of a magnon, heating at the interface under spin pumping, and spin Hall angle of the NM.

Elastic Green’s Function in Anisotropic Bimaterials Considering Interfacial Elasticity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Juan, Pierre -Alexandre; Dingreville, Remi

Here, the two-dimensional elastic Green’s function is calculated for a general anisotropic elastic bimaterial containing a line dislocation and a concentrated force while accounting for the interfacial structure by means of a generalized interfacial elasticity paradigm. The introduction of the interface elasticity model gives rise to boundary conditions that are effectively equivalent to those of a weakly bounded interface. The equations of elastic equilibrium are solved by complex variable techniques and the method of analytical continuation. The solution is decomposed into the sum of the Green’s function corresponding to the perfectly bonded interface and a perturbation term corresponding to themore » complex coupling nature between the interface structure and a line dislocation/concentrated force. Such construct can be implemented into the boundary integral equations and the boundary element method for analysis of nano-layered structures and epitaxial systems where the interface structure plays an important role.« less

Elastic Green’s Function in Anisotropic Bimaterials Considering Interfacial Elasticity

DOE PAGES

Juan, Pierre -Alexandre; Dingreville, Remi

2017-09-13

Here, the two-dimensional elastic Green’s function is calculated for a general anisotropic elastic bimaterial containing a line dislocation and a concentrated force while accounting for the interfacial structure by means of a generalized interfacial elasticity paradigm. The introduction of the interface elasticity model gives rise to boundary conditions that are effectively equivalent to those of a weakly bounded interface. The equations of elastic equilibrium are solved by complex variable techniques and the method of analytical continuation. The solution is decomposed into the sum of the Green’s function corresponding to the perfectly bonded interface and a perturbation term corresponding to themore » complex coupling nature between the interface structure and a line dislocation/concentrated force. Such construct can be implemented into the boundary integral equations and the boundary element method for analysis of nano-layered structures and epitaxial systems where the interface structure plays an important role.« less

The Status of Multi-Dimensional Core-Collapse Supernova Models

NASA Astrophysics Data System (ADS)

Müller, B.

2016-09-01

Models of neutrino-driven core-collapse supernova explosions have matured considerably in recent years. Explosions of low-mass progenitors can routinely be simulated in 1D, 2D, and 3D. Nucleosynthesis calculations indicate that these supernovae could be contributors of some lighter neutron-rich elements beyond iron. The explosion mechanism of more massive stars remains under investigation, although first 3D models of neutrino-driven explosions employing multi-group neutrino transport have become available. Together with earlier 2D models and more simplified 3D simulations, these have elucidated the interplay between neutrino heating and hydrodynamic instabilities in the post-shock region that is essential for shock revival. However, some physical ingredients may still need to be added/improved before simulations can robustly explain supernova explosions over a wide range of progenitors. Solutions recently suggested in the literature include uncertainties in the neutrino rates, rotation, and seed perturbations from convective shell burning. We review the implications of 3D simulations of shell burning in supernova progenitors for the `perturbations-aided neutrino-driven mechanism,' whose efficacy is illustrated by the first successful multi-group neutrino hydrodynamics simulation of an 18 solar mass progenitor with 3D initial conditions. We conclude with speculations about the impact of 3D effects on the structure of massive stars through convective boundary mixing.

Zonal flow generation in inertial confinement fusion implosions

DOE PAGES

Peterson, J. L.; Humbird, K. D.; Field, J. E.; ...

2017-03-06

A supervised machine learning algorithm trained on a multi-petabyte dataset of inertial confinement fusion simulations has identified a class of implosions that robustly achieve high yield, even in the presence of drive variations and hydrodynamic perturbations. These implosions are purposefully driven with a time-varying asymmetry, such that coherent flow generation during hotspot stagnation forces the capsule to self-organize into an ovoid, a shape that appears to be more resilient to shell perturbations than spherical designs. Here this new class of implosions, whose configurations are reminiscent of zonal flows in magnetic fusion devices, may offer a path to robust inertial fusion.

Effect of reheating on predictions following multiple-field inflation

NASA Astrophysics Data System (ADS)

Hotinli, Selim C.; Frazer, Jonathan; Jaffe, Andrew H.; Meyers, Joel; Price, Layne C.; Tarrant, Ewan R. M.

2018-01-01

We study the sensitivity of cosmological observables to the reheating phase following inflation driven by many scalar fields. We describe a method which allows semianalytic treatment of the impact of perturbative reheating on cosmological perturbations using the sudden decay approximation. Focusing on N -quadratic inflation, we show how the scalar spectral index and tensor-to-scalar ratio are affected by the rates at which the scalar fields decay into radiation. We find that for certain choices of decay rates, reheating following multiple-field inflation can have a significant impact on the prediction of cosmological observables.

Zonal flow generation in inertial confinement fusion implosions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Peterson, J. L.; Humbird, K. D.; Field, J. E.

A supervised machine learning algorithm trained on a multi-petabyte dataset of inertial confinement fusion simulations has identified a class of implosions that robustly achieve high yield, even in the presence of drive variations and hydrodynamic perturbations. These implosions are purposefully driven with a time-varying asymmetry, such that coherent flow generation during hotspot stagnation forces the capsule to self-organize into an ovoid, a shape that appears to be more resilient to shell perturbations than spherical designs. Here this new class of implosions, whose configurations are reminiscent of zonal flows in magnetic fusion devices, may offer a path to robust inertial fusion.

Robust interface between flying and topological qubits

PubMed Central

Xue, Zheng-Yuan; Gong, Ming; Liu, Jia; Hu, Yong; Zhu, Shi-Liang; Wang, Z. D.

2015-01-01

Hybrid architectures, consisting of conventional and topological qubits, have recently attracted much attention due to their capability in consolidating robustness of topological qubits and universality of conventional qubits. However, these two kinds of qubits are normally constructed in significantly different energy scales, and thus the energy mismatch is a major obstacle for their coupling, which can support the exchange of quantum information between them. Here we propose a microwave photonic quantum bus for a strong direct coupling between the topological and conventional qubits, where the energy mismatch is compensated by an external driving field. In the framework of tight-binding simulation and perturbation approach, we show that the energy splitting of Majorana fermions in a finite length nanowire, which we use to define topological qubits, is still robust against local perturbations due to the topology of the system. Therefore, the present scheme realizes a rather robust interface between the flying and topological qubits. Finally, we demonstrate that this quantum bus can also be used to generate multipartitie entangled states with the topological qubits. PMID:26216201

Simulations of the Richtmyer-Meshkov Instability with experimentally measured volumetric initial conditions

NASA Astrophysics Data System (ADS)

Ferguson, Kevin; Sewell, Everest; Krivets, Vitaliy; Greenough, Jeffrey; Jacobs, Jeffrey

2016-11-01

Initial conditions for the Richtmyer-Meshkov instability (RMI) are measured in three dimensions in the University of Arizona Vertical Shock Tube using a moving magnet galvanometer system. The resulting volumetric data is used as initial conditions for the simulation of the RMI using ARES at Lawrence-Livermore National Laboratory (LLNL). The heavy gas is sulfur hexafluoride (SF6), and the light gas is air. The perturbations are generated by harmonically oscillating the gasses vertically using two loudspeakers mounted to the shock tube which cause Faraday resonance, producing a random short wavelength perturbation on the interface. Planar Mie scattering is used to illuminate the flow field through the addition of propylene glycol particles seeded in the heavy gas. An M=1.2 shock impulsively accelerates the interface, initiating instability growth. Images of the initial condition and instability growth are captured at a rate of 6 kHz using high speed cameras. Comparisons between experimental and simulation results, mixing diagnostics, and mixing zone growth are presented.

Axisymmetric capillary-gravity waves at the interface of two viscous, immiscible fluids - Initial value problem

NASA Astrophysics Data System (ADS)

Farsoiya, Palas Kumar; Dasgupta, Ratul

2017-11-01

When the interface between two radially unbounded, viscous fluids lying vertically in a stable configuration (denser fluid below) at rest, is perturbed, radially propagating capillary-gravity waves are formed which damp out with time. We study this process analytically using a recently developed linearised theory. For small amplitude initial perturbations, the analytical solution to the initial value problem, represented as a linear superposition of Bessel modes at time t = 0 , is found to agree very well with results obtained from direct numerical simulations of the Navier-Stokes equations, for a range of initial conditions. Our study extends the earlier work by John W. Miles who studied this initial value problem analytically, taking into account, a single viscous fluid only. Implications of this study for the mechanistic understanding of droplet impact into a deep pool, will be discussed. Some preliminary, qualitative comparison with experiments will also be presented. We thank SERB Dept. Science & Technology, Govt. of India, Grant No. EMR/2016/000830 for financial support.

From data towards knowledge: revealing the architecture of signaling systems by unifying knowledge mining and data mining of systematic perturbation data.

PubMed

Lu, Songjian; Jin, Bo; Cowart, L Ashley; Lu, Xinghua

2013-01-01

Genetic and pharmacological perturbation experiments, such as deleting a gene and monitoring gene expression responses, are powerful tools for studying cellular signal transduction pathways. However, it remains a challenge to automatically derive knowledge of a cellular signaling system at a conceptual level from systematic perturbation-response data. In this study, we explored a framework that unifies knowledge mining and data mining towards the goal. The framework consists of the following automated processes: 1) applying an ontology-driven knowledge mining approach to identify functional modules among the genes responding to a perturbation in order to reveal potential signals affected by the perturbation; 2) applying a graph-based data mining approach to search for perturbations that affect a common signal; and 3) revealing the architecture of a signaling system by organizing signaling units into a hierarchy based on their relationships. Applying this framework to a compendium of yeast perturbation-response data, we have successfully recovered many well-known signal transduction pathways; in addition, our analysis has led to many new hypotheses regarding the yeast signal transduction system; finally, our analysis automatically organized perturbed genes as a graph reflecting the architecture of the yeast signaling system. Importantly, this framework transformed molecular findings from a gene level to a conceptual level, which can be readily translated into computable knowledge in the form of rules regarding the yeast signaling system, such as "if genes involved in the MAPK signaling are perturbed, genes involved in pheromone responses will be differentially expressed."

Electricity in foams: from one soapy interface to the macroscopic material

NASA Astrophysics Data System (ADS)

Biance, Anne-Laure

2017-11-01

Liquid foams (a dispersion of gas bubbles in a soapy solution) destabilize with time due to coarsening, coalescence and gravity driven drainage. We propose here to inhibit (or trigger) the foam destabilization by applying an electric field to the material. This effect is investigated at the different scales of the system: one soapy interface, one liquid film, the macroscopic foam. The generation of an electroosmotic flow near a soapy liquid/gas interface raises many issues. How does the flow affect surfactant repartition? Is there a Marangoni stress at the interface? At the scale of one soap film, how the electric field affects the film stability and deformation? In a macroscopic foam, one can wonder whether the electric field can indeed reverse gravity driven drainage and increase foam lifetime? These different issues are considered by developing new experimental techniques allowing us to probe surfactant repartition at liquid interfaces, soap film thicknesses and liquid foam properties when an electric field is applied. The results will be presented together with a comprehensive picture of the mechanisms arising at each scale of the material, to conclude with the potential use of electricity in liquid foams to control destabilization. Collaborators: Baptiste Blanc, Oriane Bonhomme, Laurent Joly, Christophe Ybert.

Molecular dynamics study of structure and vibrational spectra at zwitterionoic lipid/aqueous KCl, NaCl, and CaCl2 solution interfaces

NASA Astrophysics Data System (ADS)

Ishiyama, Tatsuya; Shirai, Shinnosuke; Okumura, Tomoaki; Morita, Akihiro

2018-06-01

Molecular dynamics (MD) simulations of KCl, NaCl, and CaCl2 solution/dipalmytoylphosphatidylcholine lipid interfaces were performed to analyze heterodyne-detected vibrational sum frequency generation (HD-VSFG) spectra in relation to the interfacial water structure. The present MD simulation well reproduces the experimental spectra and elucidates a specific cation effect on the interfacial structure. The K+, Na+, and Ca2+ cation species penetrate in the lipid layer more than the anions in this order, due to the electrostatic interaction with negative polar groups of lipid, and the electric double layer between the cations and anions cancels the intrinsic orientation of water at the water/lipid interface. These mechanisms explain the HD-VSFG spectrum of the water/lipid interface and its spectral perturbation by adding the ions. The lipid monolayer reverses the order of surface preference of the cations at the solution/lipid interface from that at the solution/air interface.

Comparing the Richtmyer-Meshkov instability of thermal and ion-species interfaces in two-fluid plasmas

NASA Astrophysics Data System (ADS)

Wheatley, Vincent; Bond, Daryl; Li, Yuan; Samtaney, Ravi; Pullin, Dale

2017-11-01

The Richtmyer-Meshkov instability (RMI) of a shock accelerated perturbed density interface is important in both inertial confinement fusion and astrophysics, where the materials involved are typically in the plasma state. Initial density interfaces can be due to either temperature or ion-species discontinuities. If the Atwood number of the interfaces and specific heat ratios of the fluids are matched, these two cases behave similarly when modeled using the equations of either hydrodynamics or magnetohydrodynamics. In the two-fluid ion-electron plasma model, however, there is a significant difference between them: In the thermal interface case, there is a discontinuity in electron density that is also subject to the RMI, while for the ion-species interface case there is not. It will be shown via ideal two-fluid plasma simulations that this causes substantial differences in the dynamics of the flow between the two cases. This work was partially supported by the KAUST Office of Sponsored Research under Award URF/1/2162-01.

A study on the electronic and interfacial structures of monolayer ReS2-metal contacts.

PubMed

Wang, Jin; Yang, Guofeng; Sun, Rui; Yan, Pengfei; Lu, Yanan; Xue, Junjun; Chen, Guoqing

2017-10-11

In this paper, we perform a systematic and rigorous study to evaluate the Ohmic nature of the top-contact formed by the monolayer ReS 2 (mReS 2 ) and metals (gold, silver, platinum, nickel, titanium, and scandium) by means of first-principles density functional theory calculations. We investigate the potential barrier, charge transfer and atomic orbital overlap at the mReS 2 -metal interface in consideration of van der Waals forces to understand how efficiently carriers could be injected from the metal contact to the mReS 2 channel. ReS 2 is physisorbed on Au and Ag, which leads to little perturbation of its electronic structures and forms a larger Schottky contact and a higher tunnel barrier at the interface. ReS 2 is chemisorbed on Ti and Sc, where the bonding strongly perturbs the electronic structures and is found to be purely Ohmic. The bonding of ReS 2 on Pt and Ni lies between these two extreme cases, demonstrating an intermediate behavior. These findings not only provide an insight into the mReS 2 -metal interfaces but may also prove to be instrumental in the future design of ReS 2 -based devices with good performance.

Influence of helical external driven current on nonlinear resistive tearing mode evolution and saturation in tokamaks

NASA Astrophysics Data System (ADS)

Zhang, W.; Wang, S.; Ma, Z. W.

2017-06-01

The influences of helical driven currents on nonlinear resistive tearing mode evolution and saturation are studied by using a three-dimensional toroidal resistive magnetohydrodynamic code (CLT). We carried out three types of helical driven currents: stationary, time-dependent amplitude, and thickness. It is found that the helical driven current is much more efficient than the Gaussian driven current used in our previous study [S. Wang et al., Phys. Plasmas 23(5), 052503 (2016)]. The stationary helical driven current cannot persistently control tearing mode instabilities. For the time-dependent helical driven current with f c d = 0.01 and δ c d < 0.04 , the island size can be reduced to its saturated level that is about one third of the initial island size. However, if the total driven current increases to about 7% of the total plasma current, tearing mode instabilities will rebound again due to the excitation of the triple tearing mode. For the helical driven current with time dependent strength and thickness, the reduction speed of the radial perturbation component of the magnetic field increases with an increase in the driven current and then saturates at a quite low level. The tearing mode is always controlled even for a large driven current.

Nonambipolar Transport and Torque in Perturbed Equilibria

NASA Astrophysics Data System (ADS)

Logan, N. C.; Park, J.-K.; Wang, Z. R.; Berkery, J. W.; Kim, K.; Menard, J. E.

2013-10-01

A new Perturbed Equilibrium Nonambipolar Transport (PENT) code has been developed to calculate the neoclassical toroidal torque from radial current composed of both passing and trapped particles in perturbed equilibria. This presentation outlines the physics approach used in the development of the PENT code, with emphasis on the effects of retaining general aspect-ratio geometric effects. First, nonambipolar transport coefficients and corresponding neoclassical toroidal viscous (NTV) torque in perturbed equilibria are re-derived from the first order gyro-drift-kinetic equation in the ``combined-NTV'' PENT formalism. The equivalence of NTV torque and change in potential energy due to kinetic effects [J-K. Park, Phys. Plas., 2011] is then used to showcase computational challenges shared between PENT and stability codes MISK and MARS-K. Extensive comparisons to a reduced model, which makes numerous large aspect ratio approximations, are used throughout to emphasize geometry dependent physics such as pitch angle resonances. These applications make extensive use of the PENT code's native interfacing with the Ideal Perturbed Equilibrium Code (IPEC), and the combination of these codes is a key step towards an iterative solver for self-consistent perturbed equilibrium torque. Supported by US DOE contract #DE-AC02-09CH11466 and the DOE Office of Science Graduate Fellowship administered by the Oak Ridge Institute for Science & Education under contract #DE-AC05-06OR23100.

CUMULATIVE EFFECTS OF COASTAL HABITAT ALTERATIONS ON FISHERY RESOURCES: TOWARD PREDICTION AT REGIONAL SCALES

EPA Science Inventory

The integrity of aquatic ecosystems and habitats at the land-sea interface is challeneged by several forces, ranging from plot scale destruction and disturbance, to watershed scale perturbations, to global changes in climate and human demographis. The scientific challenge is to ...

Out-of-equilibrium dynamics driven by localized time-dependent perturbations at quantum phase transitions

NASA Astrophysics Data System (ADS)

Pelissetto, Andrea; Rossini, Davide; Vicari, Ettore

2018-03-01

We investigate the quantum dynamics of many-body systems subject to local (i.e., restricted to a limited space region) time-dependent perturbations. If the system crosses a quantum phase transition, an off-equilibrium behavior is observed, even for a very slow driving. We show that, close to the transition, time-dependent quantities obey scaling laws. In first-order transitions, the scaling behavior is universal, and some scaling functions can be computed exactly. For continuous transitions, the scaling laws are controlled by the standard critical exponents and by the renormalization-group dimension of the perturbation at the transition. Our protocol can be implemented in existing relatively small quantum simulators, paving the way for a quantitative probe of the universal off-equilibrium scaling behavior, without the need to manipulate systems close to the thermodynamic limit.

Ionospheric Irregularities at Mars Probed by MARSIS Topside Sounding

NASA Astrophysics Data System (ADS)

Harada, Y.; Gurnett, D. A.; Kopf, A. J.; Halekas, J. S.; Ruhunusiri, S.

2018-01-01

The upper ionosphere of Mars contains a variety of perturbations driven by solar wind forcing from above and upward propagating atmospheric waves from below. Here we explore the global distribution and variability of ionospheric irregularities around the exobase at Mars by analyzing topside sounding data from the Mars Advanced Radar for Subsurface and Ionosphere Sounding (MARSIS) instrument on board Mars Express. As irregular structure gives rise to off-vertical echoes with excess propagation time, the diffuseness of ionospheric echo traces can be used as a diagnostic tool for perturbed reflection surfaces. The observed properties of diffuse echoes above unmagnetized regions suggest that ionospheric irregularities with horizontal wavelengths of tens to hundreds of kilometers are particularly enhanced in the winter hemisphere and at high solar zenith angles. Given the known inverse dependence of neutral gravity wave amplitudes on the background atmospheric temperature, the ionospheric irregularities probed by MARSIS are most likely associated with plasma perturbations driven by atmospheric gravity waves. Though extreme events with unusually diffuse echoes are more frequently observed for high solar wind dynamic pressures during some time intervals, the vast majority of the diffuse echo events are unaffected by varying solar wind conditions, implying limited influence of solar wind forcing on the generation of ionospheric irregularities. Combination of remote and in situ measurements of ionospheric irregularities would offer the opportunity for a better understanding of the ionospheric dynamics at Mars.

Driven similarity renormalization group: Third-order multireference perturbation theory

DOE PAGES

Li, Chenyang; Evangelista, Francesco A.

2017-03-28

Here, a third-order multireference perturbation theory based on the driven similarity renormalization group (DSRG-MRPT3) approach is presented. The DSRG-MRPT3 method has several appealing features: (a) it is intruder free, (b) it is size consistent, (c) it leads to a non-iterative algorithm with O(N 6) scaling, and (d) it includes reference relaxation effects. The DSRG-MRPT3 scheme is benchmarked on the potential energy curves of F 2, H 2O 2, C 2H 6, and N 2 along the F–F, O–O, C–C, and N–N bond dissociation coordinates, respectively. The nonparallelism errors of DSRG-MRPT3 are consistent with those of complete active space third-order perturbationmore » theory and multireference configuration interaction with singles and doubles and show significant improvements over those obtained from DSRG second-order multireference perturbation theory. Our efficient implementation of the DSRG-MRPT3 based on factorized electron repulsion integrals enables studies of medium-sized open-shell organic compounds. This point is demonstrated with computations of the singlet-triplet splitting (Δ ST = E T–E S) of 9,10-anthracyne. At the DSRG-MRPT3 level of theory, our best estimate of the adiabatic Δ ST is 3.9 kcal mol –1, a value that is within 0.1 kcal mol –1 from multireference coupled cluster results.« less

Driven similarity renormalization group: Third-order multireference perturbation theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Chenyang; Evangelista, Francesco A.

Here, a third-order multireference perturbation theory based on the driven similarity renormalization group (DSRG-MRPT3) approach is presented. The DSRG-MRPT3 method has several appealing features: (a) it is intruder free, (b) it is size consistent, (c) it leads to a non-iterative algorithm with O(N 6) scaling, and (d) it includes reference relaxation effects. The DSRG-MRPT3 scheme is benchmarked on the potential energy curves of F 2, H 2O 2, C 2H 6, and N 2 along the F–F, O–O, C–C, and N–N bond dissociation coordinates, respectively. The nonparallelism errors of DSRG-MRPT3 are consistent with those of complete active space third-order perturbationmore » theory and multireference configuration interaction with singles and doubles and show significant improvements over those obtained from DSRG second-order multireference perturbation theory. Our efficient implementation of the DSRG-MRPT3 based on factorized electron repulsion integrals enables studies of medium-sized open-shell organic compounds. This point is demonstrated with computations of the singlet-triplet splitting (Δ ST = E T–E S) of 9,10-anthracyne. At the DSRG-MRPT3 level of theory, our best estimate of the adiabatic Δ ST is 3.9 kcal mol –1, a value that is within 0.1 kcal mol –1 from multireference coupled cluster results.« less

Dynamical transitions of a driven Ising interface

NASA Astrophysics Data System (ADS)

Sahai, Manish K.; Sengupta, Surajit

2008-03-01

We study the structure of an interface in a three-dimensional Ising system created by an external nonuniform field H(r,t) . H changes sign over a two-dimensional plane of arbitrary orientation. When the field is pulled with velocity ve , [i.e., H(r,t)=H(r-vet) ], the interface undergoes several dynamical transitions. For low velocities it is pinned by the field profile and moves along with it, the distribution of local slopes undergoing a series of commensurate-incommensurate transitions. For large ve the interface depins and grows with Kardar-Parisi-Zhang exponents.

Experiments on the Richtmyer-Meshkov Instability of Incompressible Fluids

NASA Technical Reports Server (NTRS)

Jacobs, J.; Niederhaus, C.

2000-01-01

Richtmyer-Meshkov (R-M) instability occurs when two different density fluids are impulsively accelerated in the direction normal to their nearly planar interface. The instability causes small perturbations on the interface to grow and possibly become turbulent given the proper initial conditions. R-M instability is similar to the Rayleigh-Taylor (R-T) instability, which is generated when the two fluids undergo a constant acceleration. R-M instability is a fundamental fluid instability that is important to fields ranging from astrophysics to high-speed combustion. For example, R-M instability is currently the limiting factor in achieving a net positive yield with inertial confinement fusion. The experiments described here utilize a novel technique that circumvents many of the experimental difficulties previously limiting the study of the R-M instability. A Plexiglas tank contains two unequal density liquids and is gently oscillated horizontally to produce a controlled initial fluid interface shape. The tank is mounted to a sled on a high speed, low friction linear rail system, constraining the main motion to the vertical direction. The sled is released from an initial height and falls vertically until it bounces off of a movable spring, imparting an impulsive acceleration in the upward direction. As the sled travels up and down the rails, the spring retracts out of the way, allowing the instability to evolve in free-fall until impacting a shock absorber at the end of the rails. The impulsive acceleration provided to the system is measured by a piezoelectric accelerometer mounted on the tank, and a capacitive accelerometer measures the low-level drag of the bearings. Planar Laser-Induced Fluorescence is used for flow visualization, which uses an Argon ion laser to illuminate the flow and a CCD camera, mounted to the sled, to capture images of the interface. This experimental study investigates the instability of an interface between incompressible, miscible liquids with an initial sinusoidal perturbation. The amplitude of the disturbance during the experiment is measured and compared to theory. The results show good agreement (within 10%) with linear stability theory up to nondimensional amplitude ka = 0.7 (wavenumber x amplitude). These results hold true for an initial ka (before acceleration) of -0.7 less than ka less than -0.06, while the linear theory was developed for absolute value of ka much less than 1. In addition, a third order weakly nonlinear perturbation theory is shown to be accurate for amplitudes as large as ka = 1.3, even though the interface becomes double-valued at ka = 1.1. As time progresses, the vorticity on the interface concentrates, and the interface spirals around the alternating sign vortex centers to form a mushroom pattern. At higher Reynolds Number (based on circulation), an instability of the vortex cores has been observed. While time limitations of the apparatus prevent determination of a critical Reynolds Number, the lowest Reynolds Number this vortex instability has been observed at is 5000.

Early/fast VLF events produced by the quiescent heating of the lower ionosphere by thunderstorms

NASA Astrophysics Data System (ADS)

Kabirzadeh, R.; Marshall, R. A.; Inan, U. S.

2017-06-01

Large and easily distinguishable perturbations of the VLF transmitter signals due to interactions with thundercloud-driven ionospheric modifications have been observed and studied for about three decades. These events are called "early/fast VLF" or "early VLF" events due to their immediate detection (˜20 ms) after the causative lightning flash on the ground and the fast rise time of the perturbed signal. Despite many years of study, the physical mechanisms responsible for these perturbations are still under investigation. Modifications of the sustained heating level of the ionosphere due to a lightning flash has been previously proposed as the causative mechanism of early/fast VLF events. The perturbations predicted by this mechanism, however, have been much smaller than experimental observations of 0.2-1 dB or higher. In this study, by using an improved 3-D thundercloud electrostatic upward coupling model which uses a realistic geomagnetic field, we find that the sustained heating model can predict perturbations that are consistent with reported experimental observations. Modifications in the quiescent heating of the lower ionosphere by thundercloud fields by individual lightning flashes may thus account for some observations of early/fast VLF events.

Behaviour of rippled shocks from ablatively-driven Richtmyer-Meshkov in metals accounting for strength

DOE PAGES

Opie, S.; Gautam, S.; Fortin, E.; ...

2016-05-26

While numerous continuum material strength and phase transformation models have been proposed to capture their complex dependences on intensive properties and deformation history, few experimental methods are available to validate these models particularly in the large pressure and strain rate regime typical of strong shock and ramp dynamic loading. In the experiments and simulations we present, a rippled shock is created by laser-ablation of a periodic surface perturbation on a metal target. The strength of the shock can be tuned to access phase transitions in metals such as iron or simply to study high-pressure strength in isomorphic materials such asmore » copper. Simulations, with models calibrated and validated to the experiments, show that the evolution of the amplitude of imprinted perturbations on the back surface by the rippled shock is strongly affected by strength and phase transformation kinetics. Increased strength has a smoothing effect on the perturbed shock front profile resulting in smaller perturbations on the free surface. Lastly, in iron, faster phase transformations kinetics had a similar effect as increased strength, leading to smoother pressure contours inside the samples and smaller amplitudes of free surface perturbations in our simulations.« less

ACOSS SEVEN (Active Control of Space Structures)

DTIC Science & Technology

1981-09-01

methodology we arrive at the stability conditions indicated in Figure 2-35. The Liapunov stability parameters, 2-40 the epsilons , are direct functions of the...variation is driven by the desire to vary the natural frequen- cies by 10%. Dynamic analyses were conducted on both perturbed models using NASTRAN . The

Mutational analysis of cysteine 328 and cysteine 368 at the interface of Plasmodium falciparum adenylosuccinate synthetase.

PubMed

Mehrotra, Sonali; B Ningappa, Mylarappa; Raman, Jayalakshmi; Anand, Ranjith P; Balaram, Hemalatha

2012-04-01

Plasmodium falciparum adenylosuccinate synthetase, a homodimeric enzyme, contains 10 cysteine residues per subunit. Among these, Cys250, Cys328 and Cys368 lie at the dimer interface and are not conserved across organisms. PfAdSS has a positively charged interface with the crystal structure showing additional electron density around Cys328 and Cys368. Biochemical characterization of site directed mutants followed by equilibrium unfolding studies permits elucidation of the role of interface cysteines and positively charged interface in dimer stability. Mutation of interface cysteines, Cys328 and Cys368 to serine, perturbed the monomer-dimer equilibrium in the protein with a small population of monomer being evident in the double mutant. Introduction of negative charge in the form of C328D mutation resulted in stabilization of protein dimer as evident by size exclusion chromatography at high ionic strength buffer and equilibrium unfolding in the presence of urea. These observations suggest that cysteines at the dimer interface of PfAdSS may indeed be charged and exist as thiolate anion. Copyright © 2012 Elsevier B.V. All rights reserved.

Linear analysis of the Richtmyer-Meshkov instability in shock-flame interactions

NASA Astrophysics Data System (ADS)

Massa, L.; Jha, P.

2012-05-01

Shock-flame interactions enhance supersonic mixing and detonation formation. Therefore, their analysis is important to explosion safety, internal combustion engine performance, and supersonic combustor design. The fundamental process at the basis of the interaction is the Richtmyer-Meshkov instability supported by the density difference between burnt and fresh mixtures. In the present study we analyze the effect of reactivity on the Richtmyer-Meshkov instability with particular emphasis on combustion lengths that typify the scaling between perturbation growth and induction. The results of the present linear analysis study show that reactivity changes the perturbation growth rate by developing a pressure gradient at the flame surface. The baroclinic torque based on the density gradient across the flame acts to slow down the instability growth of high wave-number perturbations. A gasdynamic flame representation leads to the definition of a Peclet number representing the scaling between perturbation and thermal diffusion lengths within the flame. Peclet number effects on perturbation growth are observed to be marginal. The gasdynamic model also considers a finite flame Mach number that supports a separation between flame and contact discontinuity. Such a separation destabilizes the interface growth by augmenting the tangential shear.

Simulation of the zero-temperature behavior of a three-dimensional elastic medium

NASA Astrophysics Data System (ADS)

McNamara, David; Middleton, A. Alan; Zeng, Chen

1999-10-01

We have performed numerical simulation of a three-dimensional elastic medium, with scalar displacements, subject to quenched disorder. In the absence of topological defects this system is equivalent to a (3+1)-dimensional interface subject to a periodic pinning potential. We have applied an efficient combinatorial optimization algorithm to generate exact ground states for this interface representation. Our results indicate that this Bragg glass is characterized by power law divergences in the structure factor S(k)~Ak-3. We have found numerically consistent values of the coefficient A for two lattice discretizations of the medium, supporting universality for A in the isotropic systems considered here. We also examine the response of the ground state to the change in boundary conditions that corresponds to introducing a single dislocation loop encircling the system. The rearrangement of the ground state caused by this change is equivalent to the domain wall of elastic deformations which span the dislocation loop. Our results indicate that these domain walls are highly convoluted, with a fractal dimension df=2.60(5). We also discuss the implications of the domain wall energetics for the stability of the Bragg glass phase. Elastic excitations similar to these domain walls arise when the pinning potential is slightly perturbed. As in other disordered systems, perturbations of relative strength δ introduce a new length scale L*~δ-1/ζ beyond which the perturbed ground state becomes uncorrelated with the reference (unperturbed) ground state. We have performed a scaling analysis of the response of the ground state to the perturbations and obtain ζ=0.385(40). This value is consistent with the scaling relation ζ=df/2-θ, where θ characterizes the scaling of the energy fluctuations of low energy excitations.

Model-Driven Development of Interactive Multimedia Applications with MML

NASA Astrophysics Data System (ADS)

Pleuss, Andreas; Hussmann, Heinrich

There is an increasing demand for high-quality interactive applications which combine complex application logic with a sophisticated user interface, making use of individual media objects like graphics, animations, 3D graphics, audio or video. Their development is still challenging as it requires the integration of software design, user interface design, and media design.

System and method for embedding emotion in logic systems

NASA Technical Reports Server (NTRS)

Curtis, Steven A. (Inventor)

2012-01-01

A system, method, and computer readable-media for creating a stable synthetic neural system. The method includes training an intellectual choice-driven synthetic neural system (SNS), training an emotional rule-driven SNS by generating emotions from rules, incorporating the rule-driven SNS into the choice-driven SNS through an evolvable interface, and balancing the emotional SNS and the intellectual SNS to achieve stability in a nontrivial autonomous environment with a Stability Algorithm for Neural Entities (SANE). Generating emotions from rules can include coding the rules into the rule-driven SNS in a self-consistent way. Training the emotional rule-driven SNS can occur during a training stage in parallel with training the choice-driven SNS. The training stage can include a self assessment loop which measures performance characteristics of the rule-driven SNS against core genetic code. The method uses a stability threshold to measure stability of the incorporated rule-driven SNS and choice-driven SNS using SANE.

Evaporation effects in a shock-driven multiphase instability with a spherical interface

NASA Astrophysics Data System (ADS)

Paudel, Manoj; Dahal, Jeevan; McFarland, Jacob

2017-11-01

This talk presents results from 3D numerical simulations of a shock driven instability of a gas-particle system with a spherical interface. Two cases, one with an evaporating particle cloud and another with a gas only approximation of this particle cloud, were run in the hydrodynamics code FLASH, developed at University of Chicago. It is shown that the gas only approximation, a classical Richtmyer Meshkov instability, cannot replicate effects from particles like, lag, clustering, and evaporation. Instead, both gas hydrodynamics and particle properties influence one another and are coupled. Results are presented to highlight the coupling of interface evolution and particle evaporation. Qualitative and quantitative differences in the RMI and SDMI are presented by studying the change in gas properties like density and vorticity within the interface. Similarly, the effect of gas hydrodynamics on particles distribution and evaporation is studied. Particle evaporation rates are compared with 1D models and show poor agreement. The variation in evaporation rates for similar sized particles and the role of gas hydrodynamics in these variation is explored.

Interface-engineered oxygen octahedral coupling in manganite heterostructures

NASA Astrophysics Data System (ADS)

Huijben, M.; Koster, G.; Liao, Z. L.; Rijnders, G.

2017-12-01

Control of the oxygen octahedral coupling (OOC) provides a large degree of freedom to manipulate physical phenomena in complex oxide heterostructures. Recently, local tuning of the tilt angle has been found to control the magnetic anisotropy in ultrathin films of manganites and ruthenates, while symmetry control can manipulate the metal insulator transition in nickelate thin films. The required connectivity of the octahedra across the heterostructure interface enforces a geometric constraint to the 3-dimensional octahedral network in epitaxial films. Such geometric constraint will either change the tilt angle to retain the connectivity of the corner shared oxygen octahedral network or guide the formation of a specific symmetry throughout the epitaxial film. Here, we will discuss the control of OOC in manganite heterostructures by interface-engineering. OOC driven magnetic and transport anisotropies have been realized in LSMO/NGO heterostructures. Competition between the interfacial OOC and the strain further away from the interface leads to a thickness driven sharp transition of the anisotropic properties. Furthermore, octahedral relaxation leading to a change of p-d hybridization driven by interfacial OOC appears to be the strongest factor in thickness related variations of magnetic and transport properties in epitaxial LSMO films on NGO substrates. The results unequivocally link the atomic structure near the interfaces to the macroscopic properties. The strong correlation between a controllable oxygen network and the functionalities will have significant impact on both fundamental research and technological application of correlated perovskite heterostructures. By controlling the interfacial OOC, it is possible to pattern in 3 dimensions the magnetization to achieve non-collinear magnetization in both in-plane and out of plane directions, thus making the heterostructures promising for application in orthogonal spin transfer devices, spin oscillators, and low field sensors.

Quantum correlations from a room-temperature optomechanical cavity

NASA Astrophysics Data System (ADS)

Purdy, T. P.; Grutter, K. E.; Srinivasan, K.; Taylor, J. M.

2017-06-01

The act of position measurement alters the motion of an object being measured. This quantum measurement backaction is typically much smaller than the thermal motion of a room-temperature object and thus difficult to observe. By shining laser light through a nanomechanical beam, we measure the beam’s thermally driven vibrations and perturb its motion with optical force fluctuations at a level dictated by the Heisenberg measurement-disturbance uncertainty relation. We demonstrate a cross-correlation technique to distinguish optically driven motion from thermally driven motion, observing this quantum backaction signature up to room temperature. We use the scale of the quantum correlations, which is determined by fundamental constants, to gauge the size of thermal motion, demonstrating a path toward absolute thermometry with quantum mechanically calibrated ticks.

Ice-Shelf Flexure and Tidal Forcing of Bindschadler Ice Stream, West Antarctica

NASA Technical Reports Server (NTRS)

Walker, Ryan T.; Parizek, Bryron R.; Alley, Richard B.; Brunt, Kelly M.; Anandakrishnan, Sridhar

2014-01-01

Viscoelastic models of ice-shelf flexure and ice-stream velocity perturbations are combined into a single efficient flowline model to study tidal forcing of grounded ice. The magnitude and timing of icestream response to tidally driven changes in hydrostatic pressure and/or basal drag are found to depend significantly on bed rheology, with only a perfectly plastic bed allowing instantaneous velocity response at the grounding line. The model can reasonably reproduce GPS observations near the grounding zone of Bindschadler Ice Stream (formerly Ice Stream D) on semidiurnal time scales; however, other forcings such as tidally driven ice-shelf slope transverse to the flowline and flexurally driven till deformation must also be considered if diurnal motion is to be matched

Theory of the corrugation instability of a piston-driven shock wave.

PubMed

Bates, J W

2015-01-01

We analyze the two-dimensional stability of a shock wave driven by a steadily moving corrugated piston in an inviscid fluid with an arbitrary equation of state. For h≤-1 or h>h(c), where h is the D'yakov parameter and h(c) is the Kontorovich limit, we find that small perturbations on the shock front are unstable and grow--at first quadratically and later linearly--with time. Such instabilities are associated with nonequilibrium fluid states and imply a nonunique solution to the hydrodynamic equations. The above criteria are consistent with instability limits observed in shock-tube experiments involving ionizing and dissociating gases and may have important implications for driven shocks in laser-fusion, astrophysical, and/or detonation studies.

Efficacy of brain-computer interface-driven neuromuscular electrical stimulation for chronic paresis after stroke.

PubMed

Mukaino, Masahiko; Ono, Takashi; Shindo, Keiichiro; Fujiwara, Toshiyuki; Ota, Tetsuo; Kimura, Akio; Liu, Meigen; Ushiba, Junichi

2014-04-01

Brain computer interface technology is of great interest to researchers as a potential therapeutic measure for people with severe neurological disorders. The aim of this study was to examine the efficacy of brain computer interface, by comparing conventional neuromuscular electrical stimulation and brain computer interface-driven neuromuscular electrical stimulation, using an A-B-A-B withdrawal single-subject design. A 38-year-old male with severe hemiplegia due to a putaminal haemorrhage participated in this study. The design involved 2 epochs. In epoch A, the patient attempted to open his fingers during the application of neuromuscular electrical stimulation, irrespective of his actual brain activity. In epoch B, neuromuscular electrical stimulation was applied only when a significant motor-related cortical potential was observed in the electroencephalogram. The subject initially showed diffuse functional magnetic resonance imaging activation and small electro-encephalogram responses while attempting finger movement. Epoch A was associated with few neurological or clinical signs of improvement. Epoch B, with a brain computer interface, was associated with marked lateralization of electroencephalogram (EEG) and blood oxygenation level dependent responses. Voluntary electromyogram (EMG) activity, with significant EEG-EMG coherence, was also prompted. Clinical improvement in upper-extremity function and muscle tone was observed. These results indicate that self-directed training with a brain computer interface may induce activity- dependent cortical plasticity and promote functional recovery. This preliminary clinical investigation encourages further research using a controlled design.

SMD-based numerical stochastic perturbation theory

NASA Astrophysics Data System (ADS)

Dalla Brida, Mattia; Lüscher, Martin

2017-05-01

The viability of a variant of numerical stochastic perturbation theory, where the Langevin equation is replaced by the SMD algorithm, is examined. In particular, the convergence of the process to a unique stationary state is rigorously established and the use of higher-order symplectic integration schemes is shown to be highly profitable in this context. For illustration, the gradient-flow coupling in finite volume with Schrödinger functional boundary conditions is computed to two-loop (i.e. NNL) order in the SU(3) gauge theory. The scaling behaviour of the algorithm turns out to be rather favourable in this case, which allows the computations to be driven close to the continuum limit.

Interaction of rippled shock wave with flat fast-slow interface

NASA Astrophysics Data System (ADS)

Zhai, Zhigang; Liang, Yu; Liu, Lili; Ding, Juchun; Luo, Xisheng; Zou, Liyong

2018-04-01

The evolution of a flat air/sulfur-hexafluoride interface subjected to a rippled shock wave is investigated. Experimentally, the rippled shock wave is produced by diffracting a planar shock wave around solid cylinder(s), and the effects of the cylinder number and the spacing between cylinders on the interface evolution are considered. The flat interface is created by a soap film technique. The postshock flow and the evolution of the shocked interface are captured by a schlieren technique combined with a high-speed video camera. Numerical simulations are performed to provide more details of flows. The wave patterns of a planar shock wave diffracting around one cylinder or two cylinders are studied. The shock stability problem is analytically discussed, and the effects of the spacing between cylinders on shock stability are highlighted. The relationship between the amplitudes of the rippled shock wave and the shocked interface is determined in the single cylinder case. Subsequently, the interface morphologies and growth rates under different cases are obtained. The results show that the shock-shock interactions caused by multiple cylinders have significant influence on the interface evolution. Finally, a modified impulsive theory is proposed to predict the perturbation growth when multiple solid cylinders are present.

Interfacial Ordering and Accompanying Divergent Capacitance at Ionic Liquid-Metal Interfaces.

PubMed

Limmer, David T

2015-12-18

A theory is constructed for dense ionic solutions near charged planar walls that is valid for strong interionic correlations. This theory predicts a fluctuation-induced, first-order transition and spontaneous charge density ordering at the interface, in the presence of an otherwise disordered bulk solution. The surface ordering is driven by applied voltage and results in an anomalous differential capacitance, in agreement with recent simulation results and consistent with experimental observations of a wide array of systems. Explicit forms for the charge density profile and capacitance are given. The theory is compared with numerical results for the charge frustrated Ising model, which is also found to exhibit a voltage driven first-order transition.

Interfacial Ordering and Accompanying Divergent Capacitance at Ionic Liquid-Metal Interfaces

NASA Astrophysics Data System (ADS)

Limmer, David T.

2015-12-01

A theory is constructed for dense ionic solutions near charged planar walls that is valid for strong interionic correlations. This theory predicts a fluctuation-induced, first-order transition and spontaneous charge density ordering at the interface, in the presence of an otherwise disordered bulk solution. The surface ordering is driven by applied voltage and results in an anomalous differential capacitance, in agreement with recent simulation results and consistent with experimental observations of a wide array of systems. Explicit forms for the charge density profile and capacitance are given. The theory is compared with numerical results for the charge frustrated Ising model, which is also found to exhibit a voltage driven first-order transition.

Experimental studies of high-confinement mode plasma response to non-axisymmetric magnetic perturbations in ASDEX Upgrade

DOE PAGES

Suttrop, Wolfgang; Kirk, A.; Nazikian, R.; ...

2016-11-22

Here, the interaction of externally applied small non-axisymmetric magnetic perturbations (MP) with tokamak high-confinement mode (H-mode) plasmas is reviewed and illustrated by recent experiments in ASDEX Upgrade. The plasma response to the vacuum MP field is amplified by stable ideal kink modes with low toroidal mode number n driven by the H-mode edge pressure gradient (and associated bootstrap current) which is experimentally evidenced by an observable shift of the poloidal mode number m away from field alignment (m = qn, with q being the safety factor) at the response maximum. A torque scan experiment demonstrates the importance of the perpendicular electron flow for shielding of the resonant magnetic perturbation, as expected from a two-fluid MHD picture. Two significant effects of MP occur in H-mode plasmas at low pedestal collisionality,more » $$\

Deconvolution of subcellular protrusion heterogeneity and the underlying actin regulator dynamics from live cell imaging.

PubMed

Wang, Chuangqi; Choi, Hee June; Kim, Sung-Jin; Desai, Aesha; Lee, Namgyu; Kim, Dohoon; Bae, Yongho; Lee, Kwonmoo

2018-04-27

Cell protrusion is morphodynamically heterogeneous at the subcellular level. However, the mechanism of cell protrusion has been understood based on the ensemble average of actin regulator dynamics. Here, we establish a computational framework called HACKS (deconvolution of heterogeneous activity in coordination of cytoskeleton at the subcellular level) to deconvolve the subcellular heterogeneity of lamellipodial protrusion from live cell imaging. HACKS identifies distinct subcellular protrusion phenotypes based on machine-learning algorithms and reveals their underlying actin regulator dynamics at the leading edge. Using our method, we discover "accelerating protrusion", which is driven by the temporally ordered coordination of Arp2/3 and VASP activities. We validate our finding by pharmacological perturbations and further identify the fine regulation of Arp2/3 and VASP recruitment associated with accelerating protrusion. Our study suggests HACKS can identify specific subcellular protrusion phenotypes susceptible to pharmacological perturbation and reveal how actin regulator dynamics are changed by the perturbation.

Inertial confinement fusion and fast ignitor studies

NASA Astrophysics Data System (ADS)

Willi, O.; Barringer, L.; Bell, A.; Borghesi, M.; Davies, J.; Gaillard, R.; Iwase, A.; MacKinnon, A.; Malka, G.; Meyer, C.; Nuruzzaman, S.; Taylor, R.; Vickers, C.; Hoarty, D.; Gobby, P.; Johnson, R.; Watt, R. G.; Blanchot, N.; Canaud, B.; Croso, H.; Meyer, B.; Miquel, J. L.; Reverdin, C.; Pukhov, A.; Meyer-ter-Vehn, J.

2000-03-01

Laser imprinting has been studied and, in particular, saturation of areal density perturbations induced by near single mode laser imprinting was observed. Several issues important for the foam buffered direct drive scheme have been investigated. These studies included measurements of the absolute levels of stimulated Brillouin and Raman scattering observed from laser irradiated low density foam targets, either bare or overcoated with a thin layer of gold. A novel scheme is proposed to increase the pressure in indirectly driven targets. By heating a foam supersonically that is attached to a solid target the pressure generated is not only the ablation pressure but also the combined pressure due to ablation at the foam-foil interface and the heated foam material. Planar brominated plastic foil targets overcoated with a low density foam were irradiated by a soft X ray pulse. The pressure was obtained by comparing the rear side trajectory of the driven target observed by soft X ray radiography with one dimensional radiation hydrodynamic simulations. Observations were also carried out of the transition from supersonic to subsonic propagation of an ionization front in low density chlorinated foam targets irradiated by an intense soft X ray pulse. The diagnostic for these measurements was K shell point projection absorption spectroscopy. In the fast ignitor area the channelling and guiding of picosecond laser pulses through underdense plasmas, preformed density channels and microtubes were investigated. It was observed that a large fraction of the incident laser energy can be propagated. Megagauss magnetic fields were measured, with a polarimetric technique, during and after propagation of intense picosecond pulses in preionized plasmas. Two types of toroidal fields, of opposite orientation, were detected. In addition, the production and propagation of an electron beam through solid glass targets irradiated at intensities above 1019W/cm2 were observed using optical probing techniques.

Measurement of charge transport through organic semiconducting devices

NASA Astrophysics Data System (ADS)

Klenkler, Richard A.

2007-12-01

In this thesis, two important and unexplored areas of organic semiconductor device physics are investigated: The first area involves determining the effect of energy barriers and intermixing at the interfaces between hole transport layers (HTLs). This effect was discerned by first establishing a method of pressure-laminating successive solution coated HTLs to gether. It was found that in the range of 0.8--3.0 MPa a pressure-laminated interface between two identical HTLs causes no measurable perturbation to charge transport. By this method, 2 different HTLs can be sandwiched together to create a discrete interface, and by inserting a mixed HTL in the middle an intermixed interface between the 2 HTLs can be simulated. With these sandwiched devices, charge injection across discrete versus intermixed interfaces were compared using time-of-flight measurements. For the hole transport materials investigated, no perturbation to the overall charge transport was observed with the discrete interface, however in contrast the rate of charge transport was clearly reduced through the intermixed interface. The second area that was investigated pertains to the development of a bulk mobility measurement technique that has a higher resolution than existing methods. The approach that was used involved decoupling the charge carrier transient signal from the device charging circuit. With this approach, the RC time constant constraint that limits the resolution of existing methods is eliminated. The resulting method, termed the photoinduced electroluminescence (EL) mobility measurement technique, was then used to compare the electron mobility of the metal chelate, AlQ3 to that of the novel triazine material, BTB. Results showed that BTB demonstrated an order of magnitude higher mobility than AlQ3. Overall, these findings have broad implications regarding device design. The pressure-lamination method could be used, e.g., as a diagnostic tool to help in the design of multilayer xerographic photoreceptors, such as those that include an abrasion resistant overcoat. Further, the photoinduced EL technique could be use as a tool to help characterize charge flow and balance in organic light emitting devices amongst others.

Diffusion of GPI-anchored proteins is influenced by the activity of dynamic cortical actin

PubMed Central

Saha, Suvrajit; Lee, Il-Hyung; Polley, Anirban; Groves, Jay T.; Rao, Madan; Mayor, Satyajit

2015-01-01

Molecular diffusion at the surface of living cells is believed to be predominantly driven by thermal kicks. However, there is growing evidence that certain cell surface molecules are driven by the fluctuating dynamics of cortical cytoskeleton. Using fluorescence correlation spectroscopy, we measure the diffusion coefficient of a variety of cell surface molecules over a temperature range of 24–37°C. Exogenously incorporated fluorescent lipids with short acyl chains exhibit the expected increase of diffusion coefficient over this temperature range. In contrast, we find that GPI-anchored proteins exhibit temperature-independent diffusion over this range and revert to temperature-dependent diffusion on cell membrane blebs, in cells depleted of cholesterol, and upon acute perturbation of actin dynamics and myosin activity. A model transmembrane protein with a cytosolic actin-binding domain also exhibits the temperature-independent behavior, directly implicating the role of cortical actin. We show that diffusion of GPI-anchored proteins also becomes temperature dependent when the filamentous dynamic actin nucleator formin is inhibited. However, changes in cortical actin mesh size or perturbation of branched actin nucleator Arp2/3 do not affect this behavior. Thus cell surface diffusion of GPI-anchored proteins and transmembrane proteins that associate with actin is driven by active fluctuations of dynamic cortical actin filaments in addition to thermal fluctuations, consistent with expectations from an “active actin-membrane composite” cell surface. PMID:26378258

The impact of vorticity waves on the shock dynamics in core-collapse supernovae

NASA Astrophysics Data System (ADS)

Huete, César; Abdikamalov, Ernazar; Radice, David

2018-04-01

Convective perturbations arising from nuclear shell burning can play an important role in propelling neutrino-driven core-collapse supernova explosions. In this work, we analyse the impact of vorticity waves on the shock dynamics, and subsequently on the post-shock flow, using the solution of the linear hydrodynamics equations. As a result of the interaction with the shock wave, vorticity waves increase their kinetic energy, and a new set of entropic and acoustic waves is deposited in the post-shock region. These perturbations interact with the neutrino-driven turbulent convection that develops in that region. Although both vorticity and acoustic waves inject non-radial motion into the gain region, the contribution of the acoustic waves is found to be negligibly small in comparison to that of the vorticity waves. On the other hand, entropy waves become buoyant and trigger more convection. Using the concept of critical neutrino luminosity, we assess the impact of these modes on the explosion conditions. While the direct injection of non-radial motion reduces the critical neutrino luminosity by ˜ 12 per cent for typical problem parameters, the buoyancy-driven convection triggered by entropy waves reduces the critical luminosity by ˜ 17-24 per cent, which approximately agrees with the results of three-dimensional neutrino-hydrodynamics simulations. Finally, we discuss the limits of validity of the assumptions employed.

Surfactant effects on heat transfer at gas/liquid interfaces

NASA Astrophysics Data System (ADS)

Lopez, J. M.; Hirsa, A. H.

2000-01-01

A formulation of a canonical model to elucidate the interplay and competition between three primary sources of heat and mass transfer in non-isothermal systems with gas/liquid interfaces is presented. The nonlinear interaction between (i) buoyancy driven flow in the bulk, (ii) thermal Marangoni flow at the gas/liquid interface, and (iii) surfactant Marangoni flow at the interface is considered. A numerical model of the Navier-Stokes and energy equations is being developed for a simple, axisymmetric flow geometry. The boundary conditions for the Navier-Stokes equations are functions of the intrinsic viscoelastic properties of the interface, specifically the surface tension and the surface viscosities. A flow geometry which is amenable to both experiments and computations for elucidating the separate effects of the three mechanisms consists of an annular region bounded by a stationary inner and an outer cylinder and floor, and a free surface. The flow is driven by the temperature difference between the inner and outer cylinder which are set independently, and the floor is insulated. The predictions of the model for earth-g can be compared to laboratory measurements of the velocity field, and the surface temperature distribution. The predictions of the model for arbitrary gravity may be subsequently tested in the microgravity environment. .

What Data for Data-Driven Learning?

ERIC Educational Resources Information Center

Boulton, Alex

2012-01-01

Corpora have multiple affordances, not least for use by teachers and learners of a foreign language (L2) in what has come to be known as "data-driven learning" or DDL. The corpus and concordance interface were originally conceived by and for linguists, so other users need to adopt the role of "language researcher" to make the most of them. Despite…

Schlieren visualization of flow-field modification over an airfoil by near-surface gas-density perturbations generated by a nanosecond-pulse-driven plasma actuator

NASA Astrophysics Data System (ADS)

Komuro, Atsushi; Takashima, Keisuke; Konno, Kaiki; Tanaka, Naoki; Nonomura, Taku; Kaneko, Toshiro; Ando, Akira; Asai, Keisuke

2017-06-01

Gas-density perturbations near an airfoil surface generated by a nanosecond dielectric-barrier-discharge plasma actuator (ns-DBDPA) are visualized using a high-speed Schlieren imaging method. Wind-tunnel experiments are conducted for a wind speed of 20 m s-1 with an NACA0015 airfoil whose chord length is 100 mm. The results show that the ns-DBDPA first generates a pressure wave and then stochastic perturbations of the gas density near the leading edge of the airfoil. Two structures with different characteristics are observed in the stochastic perturbations. One structure propagates along the boundary between the shear layer and the main flow at a speed close to that of the main flow. The other propagates more slowly on the surface of the airfoil and causes mixing between the main and shear flows. It is observed that these two heated structures interact with each other, resulting in a recovery in the negative pressure coefficient at the leading edge of the airfoil.

Robin problems with a general potential and a superlinear reaction

NASA Astrophysics Data System (ADS)

Papageorgiou, Nikolaos S.; Rădulescu, Vicenţiu D.; Repovš, Dušan D.

2017-09-01

We consider semilinear Robin problems driven by the negative Laplacian plus an indefinite potential and with a superlinear reaction term which need not satisfy the Ambrosetti-Rabinowitz condition. We prove existence and multiplicity theorems (producing also an infinity of smooth solutions) using variational tools, truncation and perturbation techniques and Morse theory (critical groups).

Improving Forecasts Through Realistic Uncertainty Estimates: A Novel Data Driven Method for Model Uncertainty Quantification in Data Assimilation

NASA Astrophysics Data System (ADS)

Pathiraja, S. D.; Moradkhani, H.; Marshall, L. A.; Sharma, A.; Geenens, G.

2016-12-01

Effective combination of model simulations and observations through Data Assimilation (DA) depends heavily on uncertainty characterisation. Many traditional methods for quantifying model uncertainty in DA require some level of subjectivity (by way of tuning parameters or by assuming Gaussian statistics). Furthermore, the focus is typically on only estimating the first and second moments. We propose a data-driven methodology to estimate the full distributional form of model uncertainty, i.e. the transition density p(xt|xt-1). All sources of uncertainty associated with the model simulations are considered collectively, without needing to devise stochastic perturbations for individual components (such as model input, parameter and structural uncertainty). A training period is used to derive the distribution of errors in observed variables conditioned on hidden states. Errors in hidden states are estimated from the conditional distribution of observed variables using non-linear optimization. The theory behind the framework and case study applications are discussed in detail. Results demonstrate improved predictions and more realistic uncertainty bounds compared to a standard perturbation approach.

Band Gap Distortion in Semiconductors Strongly Driven by Intense Mid-Infrared Laser Fields

NASA Astrophysics Data System (ADS)

Kono, J.; Chin, A. H.

2000-03-01

Crystalline solids non-resonantly driven by intense time-periodic electric fields are predicted to exhibit unusual band-gap distortion.(e.g., Y. Yacoby, Phys. Rev. 169, 610 (1968); L.C.M. Miranda, Solid State Commun. 45, 783 (1983); J.Z. Kaminski, Acta Physica Polonica A 83, 495(1993).) Such non-perturbative effects have not been observed to date because of the unavoidable sample damage due to the very high intensity required using conventional lasers ( 1 eV photon energy). Here, we report the first clear evidence of laser-induced bandgap shrinkage in semiconductors under intense mid-infrared (MIR) laser fields. The use of long-wavelength light reduces the required intensity and prohibits strong interband absorption, thereby avoiding the damage problem. The significant sub-bandgap absorption persists only during the existence of the MIR laser pulse, indicating the virtual nature of the effect. We show that this particular example of non-perturbative behavior, known as the dynamical Franz-Keldysh effect, occurs when the effective ponderomotive potential energy is comparable to the photon energy of the applied field. This work was supported by ONR, NSF, JST and NEDO.

Studies of Shock Wave Interaction with a Curtain of Massive Particles

NASA Astrophysics Data System (ADS)

Lingampally, Sumanth Reddy; Wayne, Patrick; Cooper, Sean; Izard, Ricardo Gonzalez; Jacobs, Gustaaf; Vorobieff, Peter

2017-11-01

Interaction of a shock wave with planar and perturbed curtain of massive particles is studied experimentally. To form the curtain, solid soda lime particles (30-50 micron diameter) are dropped from a hopper fitted with mesh sieves and vibrated with a motor. The curtain forms when the particles move through a rectangular slot in the top of the test section of the shock tube used in experiment. The curtain can be either planar or perturbed in the horizontal plane (parallel to the shock direction) based on the shape of the slot. This setup generates a particle curtain with a volume fraction varying between 2 and 8 percent along its vertical height. A laser illuminates the curtain in vertical and horizontal planes. When the diaphragm separating the driver and the driven section is ruptured, shock waves with Mach numbers ranging from 1 to 2, depending on the pressure, propagate down the driven section and into test section. The phenomena following the shock wave impingement on the particle curtain are captured using an Apogee Alta U42 camera. This work is supported by the National Science Foundation Grant 1603915/1603326.

Accounting of fundamental components of the rotation parameters of the Earth in the formation of a high-accuracy orbit of navigation satellites

NASA Astrophysics Data System (ADS)

Markov, Yu. G.; Mikhailov, M. V.; Pochukaev, V. N.

2012-07-01

An analysis of perturbing factors influencing the motion of a navigation satellite (NS) is carried out, and the degree of influence of each factor on the GLONASS orbit is estimated. It is found that fundamental components of the Earth's rotation parameters (ERP) are one substantial factor commensurable with maximum perturbations. Algorithms for the calculation of orbital perturbations caused by these parameters are given; these algorithms can be implemented in a consumer's equipment. The daily prediction of NS coordinates is performed on the basis of real GLONASS satellite ephemerides transmitted to a consumer, using the developed prediction algorithms taking the ERP into account. The obtained accuracy of the daily prediction of GLONASS ephemerides exceeds by tens of times the accuracy of the daily prediction performed using algorithms recommended in interface control documents.

Stability analysis of a pressure-solution surface

NASA Astrophysics Data System (ADS)

Gal, Doron; Nur, Amos; Aharonov, Einat

We present a linear stability analysis of a dissolution surface subjected to non-hydrostatic stress. A sinusoidal perturbation is imposed on an initially flat solid/fluid interface, and the consequent changes in elastic strain energy and surface energy are calculated. Our results demonstrate that if the far-field lateral stresses are either greater, or much smaller than the fluid pressure, the perturbed configuration has a lower strain energy than the initial one. For wavelengths greater than a critical wavelength this energy decrease may be large enough to offset the increased surface energy. Under these conditions, the perturbation grows unstably. If these conditions are not met, the surface becomes flat. The growth rate and wavelength of the maximally unstable mode depend on the mechanism of matter transport. We conclude that the instability discussed in this paper may account for the formation of stylolites and other pressure-solution phenomena, such as roughening of grain contacts.

Contribution to study of interfaces instabilities in plane, cylindrical and spherical geometry

NASA Astrophysics Data System (ADS)

Toque, Nathalie

1996-12-01

This thesis proposes several experiments of hydrodynamical instabilities which are studied, numerically and theoretically. The experiments are in plane and cylindrical geometry. Their X-ray radiographies show the evolution of an interface between two solid media crossed by a detonation wave. These materials are initially solid. They become liquide under shock wave or stay between two phases, solid and liquid. The numerical study aims at simulating with the codes EAD and Ouranos, the interfaces instabilities which appear in the experiments. The experimental radiographies and the numerical pictures are in quite good agreement. The theoretical study suggests to modelise a spatio-temporal part of the experiments to obtain the quantitative development of perturbations at the interfaces and in the flows. The models are linear and in plane, cylindrical and spherical geometry. They preceed the inoming study of transition between linear and non linear development of instabilities in multifluids flows crossed by shock waves.

Interface For Fault-Tolerant Control System

NASA Technical Reports Server (NTRS)

Shaver, Charles; Williamson, Michael

1989-01-01

Interface unit and controller emulator developed for research on electronic helicopter-flight-control systems equipped with artificial intelligence. Interface unit interrupt-driven system designed to link microprocessor-based, quadruply-redundant, asynchronous, ultra-reliable, fault-tolerant control system (controller) with electronic servocontrol unit that controls set of hydraulic actuators. Receives digital feedforward messages from, and transmits digital feedback messages to, controller through differential signal lines or fiber-optic cables (thus far only differential signal lines have been used). Analog signals transmitted to and from servocontrol unit via coaxial cables.

Fingering patterns in magnetic fluids: Perturbative solutions and the stability of exact stationary shapes

NASA Astrophysics Data System (ADS)

Anjos, Pedro H. A.; Lira, Sérgio A.; Miranda, José A.

2018-04-01

We examine the formation of interfacial patterns when a magnetic liquid droplet (ferrofluid, or a magnetorheological fluid), surrounded by a nonmagnetic fluid, is subjected to a radial magnetic field in a Hele-Shaw cell. By using a vortex-sheet formalism, we find exact stationary solutions for the fluid-fluid interface in the form of n -fold polygonal shapes. A weakly nonlinear, mode-coupling method is then utilized to find time-evolving perturbative solutions for the interfacial patterns. The stability of such nonzero surface tension exact solutions is checked and discussed, by trying to systematically approach the exact stationary shapes through perturbative solutions containing an increasingly larger number of participating Fourier modes. Our results indicate that the exact stationary solutions of the problem are stable, and that a good matching between exact and perturbative shape solutions is achieved just by using a few Fourier modes. The stability of such solutions is substantiated by a linearization process close to the stationary shape, where a system of mode-coupling equations is diagonalized, determining the eigenvalues which dictate the stability of a fixed point.

GPS, Earthquakes, the Ionosphere, and the Space Shuttle

NASA Technical Reports Server (NTRS)

Calais, Eric; Minster, J. Bernard

1998-01-01

Sources such as atmospheric or buried explosions and shallow earthquakes producing strong vertical ground displacements are known to produce infrasonic pressure waves in the atmosphere. Because of the coupling between neutral particles and electrons at ionospheric altitudes, these acoustic waves induce variations of the ionospheric electron density. The Global Positioning System provides a way of directly measuring the Total Electron Content in the ionosphere and, therefore. of detecting such perturbations in the upper atmosphere. In this work, we demonstrate the capabilities of the GPS technique to detect ionospheric perturbations caused by the January 17. 1994, M (sub w) =6.7, Northridge earthquake and the STS-58 Space Shuttle ascent. In both cases, we observe a perturbation of the ionospheric electron density lasting for about 30 m, with periods less than 10 m. The perturbation is complex and shows two sub-events separated by about 15 m. The phase velocities and waveform characteristics of the two sub-events lead us to interpret the first arrival as the direct propagation of 2 free wave, followed by oscillatory guided waves propagating along horizontal atmospheric interfaces at 120 km altitude and below.

Epithelial self-defense against cancer.

PubMed

Yamauchi, Hajime; Fujita, Yasuyuki

2012-11-01

It is not clearly understood what happens at the interface between normal and transformed epithelial cells at the first step of carcinogenesis. A recent study reveals that the organized epithelial structure suppresses clonal expansion of transformed cells. Translocation from the epithelium or perturbation of intercellular adhesions may be required for transformed cells to evade the suppressive environments.

Control integration concept for hypersonic cruise-turn maneuvers

NASA Technical Reports Server (NTRS)

Raney, David L.; Lallman, Frederick J.

1992-01-01

Piloting difficulties associated with conducting aircraft maneuvers in hypersonic flight are caused in part by the nonintuitive nature of the aircraft response and the stringent constraints anticipated on allowable angle of attack and dynamic pressure variations. An approach is documented that provides precise, coordinated maneuver control during excursions from a hypersonic cruise flight path and the necessary flight condition constraints. The approach is to achieve specified guidance commands by resolving altitude and cross range errors into a load factor and bank angle command by using a coordinate transformation that acts as an interface between outer and inner loop flight controls. This interface, referred to as a 'resolver', applies constraints on angle of attack and dynamic pressure perturbations while prioritizing altitude regulation over cross range. An unpiloted test simulation, in which the resolver was used to drive inner loop flight controls, produced time histories of responses to guidance commands and atmospheric disturbances at Mach numbers of 6, 10, 15, and 20. Angle of attack and throttle perturbation constraints, combined with high speed flight effects and the desire to maintain constant dynamic pressure, significantly impact the maneuver envelope for a hypersonic vehicle.

Hard real-time closed-loop electrophysiology with the Real-Time eXperiment Interface (RTXI)

PubMed Central

George, Ansel; Dorval, Alan D.; Christini, David J.

2017-01-01

The ability to experimentally perturb biological systems has traditionally been limited to static pre-programmed or operator-controlled protocols. In contrast, real-time control allows dynamic probing of biological systems with perturbations that are computed on-the-fly during experimentation. Real-time control applications for biological research are available; however, these systems are costly and often restrict the flexibility and customization of experimental protocols. The Real-Time eXperiment Interface (RTXI) is an open source software platform for achieving hard real-time data acquisition and closed-loop control in biological experiments while retaining the flexibility needed for experimental settings. RTXI has enabled users to implement complex custom closed-loop protocols in single cell, cell network, animal, and human electrophysiology studies. RTXI is also used as a free and open source, customizable electrophysiology platform in open-loop studies requiring online data acquisition, processing, and visualization. RTXI is easy to install, can be used with an extensive range of external experimentation and data acquisition hardware, and includes standard modules for implementing common electrophysiology protocols. PMID:28557998

Unraveling atomic-level self-organization at the plasma-material interface

NASA Astrophysics Data System (ADS)

Allain, J. P.; Shetty, A.

2017-07-01

The intrinsic dynamic interactions at the plasma-material interface and critical role of irradiation-driven mechanisms at the atomic scale during exposure to energetic particles require a priori the use of in situ surface characterization techniques. Characterization of ‘active’ surfaces during modification at atomic-scale levels is becoming more important as advances in processing modalities are limited by an understanding of the behavior of these surfaces under realistic environmental conditions. Self-organization from exposure to non-equilibrium and thermalized plasmas enable dramatic control of surface morphology, topography, composition, chemistry and structure yielding the ability to tune material properties with an unprecedented level of control. Deciphering self-organization mechanisms of nanoscale morphology (e.g. nanodots, ripples) and composition on a variety of materials including: compound semiconductors, semiconductors, ceramics, polymers and polycrystalline metals via low-energy ion-beam assisted plasma irradiation are critical to manipulate functionality in nanostructured systems. By operating at ultra-low energies near the damage threshold, irradiation-driven defect engineering can be optimized and surface-driven mechanisms controlled. Tunability of optical, electronic, magnetic and bioactive properties is realized by reaching metastable phases controlled by atomic-scale irradiation-driven mechanisms elucidated by novel in situ diagnosis coupled to atomistic-level computational tools. Emphasis will be made on tailored surface modification from plasma-enhanced environments on particle-surface interactions and their subsequent modification of hard and soft matter interfaces. In this review, we examine current trends towards in situ and in operando surface and sub-surface characterization to unravel atomic-scale mechanisms at the plasma-material interface. This work will emphasize on recent advances in the field of plasma and ion-induced nanopatterning and nanostructuring as well as ultra-thin film deposition. Future outlook will examine the critical role of complementary surface-sensitive techniques and trends towards advances in both in situ and in operando tooling.

Understanding Protein-Interface Interactions of a Fusion Protein at Silicone Oil-Water Interface Probed by Sum Frequency Generation Vibrational Spectroscopy.

PubMed

Li, Yaoxin; Pan, Duohai; Nashine, Vishal; Deshmukh, Smeet; Vig, Balvinder; Chen, Zhan

2018-02-01

Protein adsorbed at the silicone oil-water interface can undergo a conformational change that has the potential to induce protein aggregation on storage. Characterization of the protein structures at interface is therefore critical for understanding the protein-interface interactions. In this article, we have applied sum frequency generation (SFG) spectroscopy for studying the secondary structures of a fusion protein at interface and the surfactant effect on protein adsorption to silicone oil-water interface. SFG and chiral SFG spectra from adsorbed protein in the amide I region were analyzed. The presence of beta-sheet vibrational band at 1635 cm -1 implies the protein secondary structure was likely perturbed when protein adsorbed at silicone oil interface. The time-dependent SFG study showed a significant reduction in the SFG signal of preadsorbed protein when polysorbate 20 was introduced, suggesting surfactant has stronger interaction with the interface leading to desorption of protein from the interface. In the preadsorbed surfactant and a mixture of protein/polysorbate 20, SFG analysis confirmed that surfactant can dramatically prevent the protein adsorption to silicone oil surface. This study has demonstrated the potential of SFG for providing the detailed molecular level understanding of protein conformation at interface and assessing the influence of surfactant on protein adsorption behavior. Copyright © 2018 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.

A simple, physiologically-based model of sea turtle remigration intervals and nesting population dynamics: Effects of temperature.

PubMed

Neeman, Noga; Spotila, James R; O'Connor, Michael P

2015-09-07

Variation in the yearly number of sea turtles nesting at rookeries can interfere with population estimates and obscure real population dynamics. Previous theoretical models suggested that this variation in nesting numbers may be driven by changes in resources at the foraging grounds. We developed a physiologically-based model that uses temperatures at foraging sites to predict foraging conditions, resource accumulation, remigration probabilities, and, ultimately, nesting numbers for a stable population of sea turtles. We used this model to explore several scenarios of temperature variation at the foraging grounds, including one-year perturbations and cyclical temperature oscillations. We found that thermally driven resource variation can indeed synchronize nesting in groups of turtles, creating cohorts, but that these cohorts tend to break down over 5-10 years unless regenerated by environmental conditions. Cohorts were broken down faster at lower temperatures. One-year perturbations of low temperature had a synchronizing effect on nesting the following year, while high temperature perturbations tended to delay nesting in a less synchronized way. Cyclical temperatures lead to cyclical responses both in nesting numbers and remigration intervals, with the amplitude and lag of the response depending on the duration of the cycle. Overall, model behavior is consistent with observations at nesting beaches. Future work should focus on refining the model to fit particular nesting populations and testing further whether or not it may be used to predict observed nesting numbers and remigration intervals. Copyright © 2015 Elsevier Ltd. All rights reserved.

Non-modal theory of the kinetic ion temperature gradient driven instability of plasma shear flows across the magnetic field

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mikhailenko, V. V., E-mail: vladimir@pusan.ac.kr; Mikhailenko, V. S.; Lee, Hae June, E-mail: haejune@pusan.ac.kr

2016-06-15

The temporal evolution of the kinetic ion temperature gradient driven instability and of the related anomalous transport of the ion thermal energy of plasma shear flow across the magnetic field is investigated analytically. This instability develops in a steady plasma due to the inverse ion Landau damping and has the growth rate of the order of the frequency when the ion temperature is equal to or above the electron temperature. The investigation is performed employing the non-modal methodology of the shearing modes which are the waves that have a static spatial structure in the frame of the background flow. Themore » solution of the governing linear integral equation for the perturbed potential displays that the instability experiences the non-modal temporal evolution in the shearing flow during which the unstable perturbation becomes very different from a canonical modal form. It transforms into the non-modal structure with vanishing frequency and growth rate with time. The obtained solution of the nonlinear integral equation, which accounts for the random scattering of the angle of the ion gyro-motion due to the interaction of ions with ensemble of shearing waves, reveals similar but accelerated process of the transformations of the perturbations into the zero frequency structures. It was obtained that in the shear flow the anomalous ion thermal conductivity decays with time. It is a strictly non-modal effect, which originates from the temporal evolution of the shearing modes turbulence.« less

Tsunamigenic Gravity Waves in the Thermosphere-Ionosphere System: Challenges and Opportunities (Invited)

NASA Astrophysics Data System (ADS)

Hickey, M. P.

2010-12-01

There has been a recent resurgence of interest in the association between tsunamis and traveling ionospheric disturbances (TIDs), fueled in part by the use of GPS satellite technologies to remotely monitor the ionosphere. The TID observations have also triggered a renewed interest in the modeling of such events. Up to this point in time the various model simulations have incorporated various simplifications, some of which are briefly described. A future challenge is to bring together suites of models that each realistically describes one of the subsystems. In this talk I will describe the results of using a linear spectral full-wave model to simulate the propagation of a gravity wave disturbance from the sea surface to the thermosphere. In the model this disturbance is driven by a lower boundary perturbation that mimics a tsunami. A linear model describing the response of the ionosphere to neutral atmosphere perturbations, and airglow perturbations driven by ionosphere and neutral atmosphere fluctuations are also described. Additionally, the gravity wave disturbances carries wave momentum, which will be deposited in the thermosphere accompanying the viscous dissipation of wave energy and lead to accelerations of the mean state. In spite of the simplicity of these models, much can be learned from them. It is suggested that these rare events offer a fairly unique opportunity to test models describing such processes. Model predictions of total electron content (TEC) fluctuations are also briefly compared with TEC measurements obtained following some recent major tsunamis.

Efficiency of extracting stereo-driven object motions

PubMed Central

Jain, Anshul; Zaidi, Qasim

2013-01-01

Most living things and many nonliving things deform as they move, requiring observers to separate object motions from object deformations. When the object is partially occluded, the task becomes more difficult because it is not possible to use two-dimensional (2-D) contour correlations (Cohen, Jain, & Zaidi, 2010). That leaves dynamic depth matching across the unoccluded views as the main possibility. We examined the role of stereo cues in extracting motion of partially occluded and deforming three-dimensional (3-D) objects, simulated by disk-shaped random-dot stereograms set at randomly assigned depths and placed uniformly around a circle. The stereo-disparities of the disks were temporally oscillated to simulate clockwise or counterclockwise rotation of the global shape. To dynamically deform the global shape, random disparity perturbation was added to each disk's depth on each stimulus frame. At low perturbation, observers reported rotation directions consistent with the global shape, even against local motion cues, but performance deteriorated at high perturbation. Using 3-D global shape correlations, we formulated an optimal Bayesian discriminator for rotation direction. Based on rotation discrimination thresholds, human observers were 75% as efficient as the optimal model, demonstrating that global shapes derived from stereo cues facilitate inferences of object motions. To complement reports of stereo and motion integration in extrastriate cortex, our results suggest the possibilities that disparity selectivity and feature tracking are linked, or that global motion selective neurons can be driven purely from disparity cues. PMID:23325345

Role of entrapped vapor bubbles during microdroplet evaporation

NASA Astrophysics Data System (ADS)

Putnam, Shawn A.; Byrd, Larry W.; Briones, Alejandro M.; Hanchak, Michael S.; Ervin, Jamie S.; Jones, John G.

2012-08-01

On superheated surfaces, the air bubble trapped during impingement grows into a larger vapor bubble and oscillates at the frequency predicted for thermally induced capillary waves. In some cases, the entrapped vapor bubble penetrates the droplet interface, leaving a micron-sized coffee-ring pattern of pure fluid. Vapor bubble entrapment, however, does not influence the evaporation rate. This is also true on laser heated surfaces, where a laser can thermally excite capillary waves and induce bubble oscillations over a broad range of frequencies, suggesting that exciting perturbations in a pinned droplets interface is not an effective avenue for enhancing evaporative heat transfer.

Stable solutions of inflation driven by vector fields

NASA Astrophysics Data System (ADS)

Emami, Razieh; Mukohyama, Shinji; Namba, Ryo; Zhang, Ying-li

2017-03-01

Many models of inflation driven by vector fields alone have been known to be plagued by pathological behaviors, namely ghost and/or gradient instabilities. In this work, we seek a new class of vector-driven inflationary models that evade all of the mentioned instabilities. We build our analysis on the Generalized Proca Theory with an extension to three vector fields to realize isotropic expansion. We obtain the conditions required for quasi de-Sitter solutions to be an attractor analogous to the standard slow-roll one and those for their stability at the level of linearized perturbations. Identifying the remedy to the existing unstable models, we provide a simple example and explicitly show its stability. This significantly broadens our knowledge on vector inflationary scenarios, reviving potential phenomenological interests for this class of models.

Flow-Driven Waves and Phase-Locked Self-Organization in Quasi-One-Dimensional Colonies of Dictyostelium discoideum

NASA Astrophysics Data System (ADS)

Gholami, A.; Steinbock, O.; Zykov, V.; Bodenschatz, E.

2015-01-01

We report experiments on flow-driven waves in a microfluidic channel containing the signaling slime mold Dictyostelium discoideum. The observed cyclic adenosine monophosphate (cAMP) wave trains developed spontaneously in the presence of flow and propagated with the velocity proportional to the imposed flow velocity. The period of the wave trains was independent of the flow velocity. Perturbations of flow-driven waves via external periodic pulses of the signaling agent cAMP induced 1 ∶1 , 2 ∶1 , 3 ∶1 , and 1 ∶2 frequency responses, reminiscent of Arnold tongues in forced oscillatory systems. We expect our observations to be generic to active media governed by reaction-diffusion-advection dynamics, where spatially bound autocatalytic processes occur under flow conditions.

Investigating the inter-subunit/subdomain interactions and motions relevant to disease mutations in the N-terminal domain of ryanodine receptors by molecular dynamics simulation.

PubMed

Zheng, Wenjun; Liu, Zheng

2017-09-01

The ryanodine receptors (RyR) are essential to calcium signaling in striated muscles, and numerous disease mutations have been identified in two RyR isoforms, RyR1 in skeletal muscle and RyR2 in cardiac muscle. A deep understanding of the activation/regulation mechanisms of RyRs has been hampered by the shortage of high-resolution structures and dynamic information for this giant tetrameric complex in different functional states. Toward elucidating the molecular mechanisms of disease mutations in RyRs, we performed molecular dynamics simulation of the N-terminal domain (NTD) which is not only the best-resolved structural component of RyRs, but also a hotspot of disease mutations. First, we simulated the tetrameric NTD of wild-type RyR1 and three disease mutants (K155E, R157Q, and R164Q) that perturb the inter-subunit interfaces. Our simulations identified a dynamic network of salt bridges involving charged residues at the inter-subunit/subdomain interfaces and disease-mutation sites. By perturbing this key network, the above three mutations result in greater flexibility with the highest inter-subunit opening probability for R157Q. Next, we simulated the monomeric NTD of RyR2 in the presence or absence of a central Cl - anion which is known to stabilize the interfaces between the three NTD subdomains (A, B, and C). We found that the loss of Cl - restructures the salt-bridge network near the Cl - -binding site, leading to rotations of subdomain A/B relative to subdomain C and enhanced mobility between the subdomains. This finding supports a mechanism for disease mutations in the NTD of RyR2 via perturbation of the Cl - binding. The rich structural and dynamic information gained from this study will guide future mutational and functional studies of the NTD of RyRs. Proteins 2017; 85:1633-1644. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Adapting SAFT-γ perturbation theory to site-based molecular dynamics simulation. II. Confined fluids and vapor-liquid interfaces

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ghobadi, Ahmadreza F.; Elliott, J. Richard, E-mail: elliot1@uakron.edu

2014-07-14

In this work, a new classical density functional theory is developed for group-contribution equations of state (EOS). Details of implementation are demonstrated for the recently-developed SAFT-γ WCA EOS and selective applications are studied for confined fluids and vapor-liquid interfaces. The acronym WCA (Weeks-Chandler-Andersen) refers to the characterization of the reference part of the third-order thermodynamic perturbation theory applied in formulating the EOS. SAFT-γ refers to the particular form of “statistical associating fluid theory” that is applied to the fused-sphere, heteronuclear, united-atom molecular models of interest. For the monomer term, the modified fundamental measure theory is extended to WCA-spheres. A newmore » chain functional is also introduced for fused and soft heteronuclear chains. The attractive interactions are taken into account by considering the structure of the fluid, thus elevating the theory beyond the mean field approximation. The fluctuations of energy are also included via a non-local third-order perturbation theory. The theory includes resolution of the density profiles of individual groups such as CH{sub 2} and CH{sub 3} and satisfies stoichiometric constraints for the density profiles. New molecular simulations are conducted to demonstrate the accuracy of each Helmholtz free energy contribution in reproducing the microstructure of inhomogeneous systems at the united-atom level of coarse graining. At each stage, comparisons are made to assess where the present theory stands relative to the current state of the art for studying inhomogeneous fluids. Overall, it is shown that the characteristic features of real molecular fluids are captured both qualitatively and quantitatively. For example, the average pore density deviates ∼2% from simulation data for attractive pentadecane in a 2-nm slit pore. Another example is the surface tension of ethane/heptane mixture, which deviates ∼1% from simulation data while the theory reproduces the excess accumulation of ethane at the interface.« less

Analysis of mixing in high-explosive fireballs using small-scale pressurised spheres

NASA Astrophysics Data System (ADS)

Courtiaud, S.; Lecysyn, N.; Damamme, G.; Poinsot, T.; Selle, L.

2018-02-01

After the detonation of an oxygen-deficient homogeneous high explosive, a phase of turbulent combustion, called afterburning, takes place at the interface between the rich detonation products and air. Its modelling is instrumental for the accurate prediction of the performance of these explosives. Because of the high temperature of detonation products, the chemical reactions are mixing-driven. Modelling afterburning thus relies on the precise description of the mixing process inside fireballs. This work presents a joint numerical and experimental study of a non-reacting reduced-scale set-up, which uses the compressed balloon analogy and does not involve the detonation of a high explosive. The set-up produces a flow similar to the one caused by a spherical detonation and allows focusing on the mixing process. The numerical work is composed of 2D and 3D LES simulations of the set-up. It is shown that grid independence can be reached by imposing perturbations at the edge of the fireball. The results compare well with the existing literature and give new insights on the mixing process inside fireballs. In particular, they highlight the fact that the mixing layer development follows an energetic scaling law but remains sensitive to the density ratio between the detonation products and air.

Protons at the speed of sound: Predicting specific biological signaling from physics.

PubMed

Fichtl, Bernhard; Shrivastava, Shamit; Schneider, Matthias F

2016-05-24

Local changes in pH are known to significantly alter the state and activity of proteins and enzymes. pH variations induced by pulses propagating along soft interfaces (e.g. membranes) would therefore constitute an important pillar towards a physical mechanism of biological signaling. Here we investigate the pH-induced physical perturbation of a lipid interface and the physicochemical nature of the subsequent acoustic propagation. Pulses are stimulated by local acidification and propagate - in analogy to sound - at velocities controlled by the interface's compressibility. With transient local pH changes of 0.6 directly observed at the interface and velocities up to 1.4 m/s this represents hitherto the fastest protonic communication observed. Furthermore simultaneously propagating mechanical and electrical changes in the lipid interface are detected, exposing the thermodynamic nature of these pulses. Finally, these pulses are excitable only beyond a threshold for protonation, determined by the pKa of the lipid head groups. This protonation-transition plus the existence of an enzymatic pH-optimum offer a physical basis for intra- and intercellular signaling via sound waves at interfaces, where not molecular structure and mechano-enyzmatic couplings, but interface thermodynamics and thermodynamic transitions are the origin of the observations.

Complex collective dynamics of active torque-driven colloids at interfaces

DOE Office of Scientific and Technical Information (OSTI.GOV)

Snezhko, Alexey

Modern self-assembly techniques aiming to produce complex structural order or functional diversity often rely on non-equilibrium conditions in the system. Light, electric, or magnetic fields are predominantly used to modify interaction profiles of colloidal particles during self-assembly or induce complex out-of-equilibrium dynamic ordering. The energy injection rate, properties of the environment are important control parameters that influence the outcome of active (dynamic) self-assembly. The current review is focused on a case of collective dynamics and self-assembly of particles with externally driven torques coupled to a liquid or solid interface. The complexity of interactions in such systems is further enriched bymore » strong hydrodynamic coupling between particles. Unconventionally ordered dynamic self-assembled patterns, spontaneous symmetry breaking phenomena, self-propulsion, and collective transport have been reported in torque-driven colloids. Some of the features of the complex collective behavior and dynamic pattern formation in those active systems have been successfully captured in simulations.« less

Graphical programming interface: A development environment for MRI methods.

PubMed

Zwart, Nicholas R; Pipe, James G

2015-11-01

To introduce a multiplatform, Python language-based, development environment called graphical programming interface for prototyping MRI techniques. The interface allows developers to interact with their scientific algorithm prototypes visually in an event-driven environment making tasks such as parameterization, algorithm testing, data manipulation, and visualization an integrated part of the work-flow. Algorithm developers extend the built-in functionality through simple code interfaces designed to facilitate rapid implementation. This article shows several examples of algorithms developed in graphical programming interface including the non-Cartesian MR reconstruction algorithms for PROPELLER and spiral as well as spin simulation and trajectory visualization of a FLORET example. The graphical programming interface framework is shown to be a versatile prototyping environment for developing numeric algorithms used in the latest MR techniques. © 2014 Wiley Periodicals, Inc.

Effect of interfacial stresses in an elastic body with a nanoinclusion

NASA Astrophysics Data System (ADS)

Vakaeva, Aleksandra B.; Grekov, Mikhail A.

2018-05-01

The 2-D problem of an infinite elastic solid with a nanoinclusion of a different from circular shape is solved. The interfacial stresses are acting at the interface. Contact of the inclusion with the matrix satisfies the ideal conditions of cohesion. The generalized Laplace - Young law defines conditions at the interface. To solve the problem, Gurtin - Murdoch surface elasticity model, Goursat - Kolosov complex potentials and the boundary perturbation method are used. The problem is reduced to the solution of two independent Riemann - Hilbert's boundary problems. For the circular inclusion, hypersingular integral equation in an unknown interfacial stress is derived. The algorithm of solving this equation is constructed. The influence of the interfacial stress and the dimension of the circular inclusion on the stress distribution and stress concentration at the interface are analyzed.

Suppression of the Saffman-Taylor instability through injection of a finite slug of polymer

NASA Astrophysics Data System (ADS)

Beeson-Jones, Timothy H.; Woods, Andrew W.

2014-11-01

During secondary oil recovery, relatively mobile water can channel through oil owing to the Saffman-Taylor instability. Injection of a finite slug of polymer solution from a central well prior to the water flood suppresses the growth of the instability by reducing the adverse mobility ratio at the leading interface. A linear stability analysis of an axisymmetric base state identifies how perturbations on the leading and trailing interfaces become coupled. It also reveals the dependence of the long-time algebraic growth of each mode on the mobility ratios across the two interfaces. The viscosity of the polymer solution which minimizes the growth rate of the instability is identified, and the impact of different slug sizes on this growth is described. Funded by EPSRC & BP.

Impact of Parkinson's Disease and Dopaminergic Medication on Adaptation to Explicit and Implicit Visuomotor Perturbations

ERIC Educational Resources Information Center

Mongeon, David; Blanchet, Pierre; Messier, Julie

2013-01-01

The capacity to learn new visuomotor associations is fundamental to adaptive motor behavior. Evidence suggests visuomotor learning deficits in Parkinson's disease (PD). However, the exact nature of these deficits and the ability of dopamine medication to improve them are under-explored. Previous studies suggested that learning driven by large and…

Effects of intermediate-severity disturbance on composition and structure in mixed Pinus-hardwood stands

Treesearch

Benjamin Trammell; Justin Hart; Callie Schweitzer; Daniel C. Dey; Michael Steinberg

2017-01-01

Increasingly, forest managers intend to create or maintain mixed Pinus-hardwood stands. This stand assemblage may be driven by a variety of objectives but is often motivated by the desire to enhance native forest diversity and promote resilience to perturbations. Documenting the effects of natural disturbances on species composition and stand...

Extremum seeking x-ray position feedback using power line harmonic leakage as the perturbation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zohar, S.; Kissick, D. J.; Venugopalan, N.

Small x-ray beam sizes necessary for probing nanoscale phenomena require exquisite stability to prevent data corruption by noise. One source of instability at synchrotron radiation x-ray beamlines is the slow detuning of x-ray optics to marginal alignment where the onset of clipping increases the beam's susceptibility to higher frequency position oscillations. In this article, we show that a 1 mu m amplitude horizontal x-ray beam oscillation driven by power line harmonic leakage into the electron storage ring can be used as perturbation for horizontal position extremum seeking feedback. Feedback performance is characterized by convergence to 1.5% away from maximum intensitymore » at optimal alignment.« less

Extremum seeking x-ray position feedback using power line harmonic leakage as the perturbation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zohar, S.; Kissick, D. J.; Venugopalan, N.

Small X-ray beam sizes necessary for probing nanoscale phenomena require exquisite stability to prevent data corruption by noise. One source of instability at synchrotron radiation X-ray beamlines is the slow detuning of X-ray optics to marginal alignment where the onset of clipping increases the beam’s susceptibility to higher frequency position oscillations. In this article, we show that a 1 µm amplitude horizontal X-ray beam oscillation driven by power line harmonic leakage into the electron storage ring can be used as perturbation for horizontal position extremum seeking feedback. Feedback performance is characterized by convergence to 1.5% away from maximum intensity atmore » optimal alignment.« less

Numerically Simulating Collisions of Plastic and Foam Laser-Driven Foils

NASA Astrophysics Data System (ADS)

Zalesak, S. T.; Velikovich, A. L.; Schmitt, A. J.; Aglitskiy, Y.; Metzler, N.

2007-11-01

Interest in experiments on colliding planar foils has recently been stimulated by (a) the Impact Fast Ignition approach to laser fusion [1], and (b) the approach to a high-repetition rate ignition facility based on direct drive with the KrF laser [2]. Simulating the evolution of perturbations to such foils can be a numerical challenge, especially if the initial perturbation amplitudes are small. We discuss the numerical issues involved in such simulations, describe their benchmarking against recently-developed analytic results, and present simulations of such experiments on NRL's Nike laser. [1] M. Murakami et al., Nucl. Fusion 46, 99 (2006) [2] S. P. Obenschain et al., Phys. Plasmas 13, 056320 (2006).

Ordering Transitions in Liquid Crystals Permit Imaging of Spatial and Temporal Patterns Formed by Proteins Penetrating into Lipid-Laden Interfaces

PubMed Central

Daschner De Tercero, Maren; Abbott, Nicholas L.

2013-01-01

Recent studies have reported that full monolayers of L-α-dilaurylphosphatidylcholine (L-DLPC) and D-α-dipalmitoylphosphatidylcholine (D-DPPC) formed at interfaces between thermotropic liquid crystals (LCs) and aqueous phases lead to homeotropic (perpendicular) orientations of nematic LCs and that specific binding of proteins to these interfaces (such as phospholipase A2 binding to D-DPPC) can trigger orientational ordering transitions in the liquid crystals. We report on the nonspecific interactions of proteins with aqueous-LC interfaces decorated with partial monolayer coverage of L-DLPC. Whereas nonspecific interactions of four proteins (cytochrome c, bovine serum albumin,immunoglobulins, and neutravidin) do not perturb the ordering of the LC when a full monolayer of L-DLPC is assembled at the aqueous-LC interface, we observe patterned orientational transitions in the LC that reflect penetration of proteins into the interface of the LC with partial monolayer coverage of L-DLPC. The spatial patterns formed by the proteins and lipids at the interface are surprisingly complex, and in some cases the protein domains are found to compartmentalize lipid within the interfaces. These results suggest that phospholipid-decorated interfaces between thermotropic liquid crystals and aqueous phases offer the basis of a simple and versatile tool to study the spatial organization and dynamics ofprotein networks formed at mobile, lipid-decorated interfaces. PMID:23671353

Roughening of surfaces under intense and rapid heating

NASA Astrophysics Data System (ADS)

Andersen, Michael Louis

The High Average Power Laser (HAPL) project is aimed at a chamber design with a solid first wall in pursuit of sustained Laser Inertial Confinement Fusion. The wall must be able to withstand cyclic high temperatures and the corresponding thermal stresses. Tungsten was proposed as a suitable armor for the wall, because as a refractory metal, it has a high melting temperature and can act as a stress dampener. The nature of the surface loading consists of x-rays, ions, and neutrons, which through mainly thermal loading, create a biaxial surface stress. This condition causes the surface to roughen as ridges and valleys form to relieve the elastic energy. As the valleys deepen they eventually become cracks and traditional fracture mechanics can be used to determine the life of the first wall. Beginning from the Asaro-Tiller-Grinfeld instability, sharp interface calculations can be performed to determine the surface profile as a result of the interplay between surface stress energy and mass transport mechanisms. One successful approach to determine interface evolution is phase field theory and its embodiment in the numerical level-set method. Applications of the method included problems of solid/liquid and solid/vapor interfaces. In the present method, however, we develop a numerical procedure for surface profile tracking directly without the need to develop partial differential equations for the phase field, which typically smooth out sharp interfaces. Surface roughening instabilities, which are driven by a competition between elastic and surface energy contributions, are shown to be significantly controlled by plastic energy dissipation. We consider here a general parametric description of the surface of a stressed solid and through a mechanical kinetic transport mechanism, follow the temporal evolution of the surface morphology. It is found that once a groove reaches a certain depth and curvature, an instability is created that cannot be followed through elasticity alone. It is shown in this thesis that these morphological instabilities do not experience unbounded growth, as predicted by consideration of elastic energy alone, and that their growth will be severely limited by dislocation emission from high curvature grooves. Comparisons between perturbation theory and the present numerical approach are given along with comparisons to results from laser, ion, and x-ray experiments. Finally, the model is applied to the conditions of Inertial Confinement Fusion chamber walls to determine the number of cycles for crack nucleation.

Experimental growth of inertial forced Richtmyer-Meshkov instabilities for different Atwood numbers

NASA Astrophysics Data System (ADS)

Redondo, J. M.; Castilla, R.

2009-04-01

Richtmyer-Meshkov instability occurs when a shock wave impinges on an interface separating two fluids having different densities [1,2]. The instability causes perturbations on the interface to grow, bubbles and spikes, producing vortical structures which potentially result in a turbulent mixing layer. In addition to shock tube experiments, the incompressible Richtmyer-Meshkov instability has also been studied by impulsively accelerating containers of incompressible fluids. Castilla and Redondo (1994) [3] first exploited this technique by dropping tanks containing a liquid and air or two liquids onto a cushioned surface. This technique was improved upon by Niederhaus and Jacobs (2003)[4] by mounting the tank onto a rail system and then allowing it to bounce off of a fixed spring. A range of both miscible and inmiscible liquids were used, giving a wide range of Atwood numbers using the combinations of air, water, alcohol, oil and mercury. Experimental results show the different pattern selection of both the bubbles and spikes for the different Atwood numbers. Visual analysis of the marked interfaces allows to distinguish the regions of strong mixing and compare self-similarity growth of the mixing region. [1] Meshkov, E. E. 1969 Instability of the interface of two gases accelerated by a shock wave. Fluid Dynamics 4, 101-104. [2] Brouillette, M. & Sturtevant, B. 1994 Experiments on the Richtmyer-Meshkov instability: single-scale perturbations on a continuous interface. Journal of Fluid Mechanics 263, 271-292. [3] Castilla, R. & Redondo, J. M. 1994 Mixing Front Growth in RT and RM Instabilities. Proceedings of the Fourth International Workshop on the Physics of Compressible Turbulent Mixing, Cambridge, United Kingdom, edited by P. F. Linden, D. L. Youngs, and S. B. Dalziel, 11-31. [4] Niederhaus, C. E. & Jacobs, J. W. 2003 Experimental study of the Richtmyer-Meshkov instability of incompressible fluids. Journal of Fluid Mechanics 485, 243-277.

Finite-frequency sensitivity kernels for head waves

NASA Astrophysics Data System (ADS)

Zhang, Zhigang; Shen, Yang; Zhao, Li

2007-11-01

Head waves are extremely important in determining the structure of the predominantly layered Earth. While several recent studies have shown the diffractive nature and the 3-D Fréchet kernels of finite-frequency turning waves, analogues of head waves in a continuous velocity structure, the finite-frequency effects and sensitivity kernels of head waves are yet to be carefully examined. We present the results of a numerical study focusing on the finite-frequency effects of head waves. Our model has a low-velocity layer over a high-velocity half-space and a cylindrical-shaped velocity perturbation placed beneath the interface at different locations. A 3-D finite-difference method is used to calculate synthetic waveforms. Traveltime and amplitude anomalies are measured by the cross-correlation of synthetic seismograms from models with and without the velocity perturbation and are compared to the 3-D sensitivity kernels constructed from full waveform simulations. The results show that the head wave arrival-time and amplitude are influenced by the velocity structure surrounding the ray path in a pattern that is consistent with the Fresnel zones. Unlike the `banana-doughnut' traveltime sensitivity kernels of turning waves, the traveltime sensitivity of the head wave along the ray path below the interface is weak, but non-zero. Below the ray path, the traveltime sensitivity reaches the maximum (absolute value) at a depth that depends on the wavelength and propagation distance. The sensitivity kernels vary with the vertical velocity gradient in the lower layer, but the variation is relatively small at short propagation distances when the vertical velocity gradient is within the range of the commonly accepted values. Finally, the depression or shoaling of the interface results in increased or decreased sensitivities, respectively, beneath the interface topography.

Verification of gyrokinetic particle simulation of current-driven instability in fusion plasmas. I. Internal kink mode

DOE Office of Scientific and Technical Information (OSTI.GOV)

McClenaghan, J.; Lin, Z.; Holod, I.

The gyrokinetic toroidal code (GTC) capability has been extended for simulating internal kink instability with kinetic effects in toroidal geometry. The global simulation domain covers the magnetic axis, which is necessary for simulating current-driven instabilities. GTC simulation in the fluid limit of the kink modes in cylindrical geometry is verified by benchmarking with a magnetohydrodynamic eigenvalue code. Gyrokinetic simulations of the kink modes in the toroidal geometry find that ion kinetic effects significantly reduce the growth rate even when the banana orbit width is much smaller than the radial width of the perturbed current layer at the mode rational surface.

Numerical optimization of perturbative coils for tokamaks

NASA Astrophysics Data System (ADS)

Lazerson, Samuel; Park, Jong-Kyu; Logan, Nikolas; Boozer, Allen; NSTX-U Research Team

2014-10-01

Numerical optimization of coils which apply three dimensional (3D) perturbative fields to tokamaks is presented. The application of perturbative 3D magnetic fields in tokamaks is now commonplace for control of error fields, resistive wall modes, resonant field drive, and neoclassical toroidal viscosity (NTV) torques. The design of such systems has focused on control of toroidal mode number, with coil shapes based on simple window-pane designs. In this work, a numerical optimization suite based on the STELLOPT 3D equilibrium optimization code is presented. The new code, IPECOPT, replaces the VMEC equilibrium code with the IPEC perturbed equilibrium code, and targets NTV torque by coupling to the PENT code. Fixed boundary optimizations of the 3D fields for the NSTX-U experiment are underway. Initial results suggest NTV torques can be driven by normal field spectrums which are not pitch-resonant with the magnetic field lines. Work has focused on driving core torque with n = 1 and edge torques with n = 3 fields. Optimizations of the coil currents for the planned NSTX-U NCC coils highlight the code's free boundary capability. This manuscript has been authored by Princeton University under Contract Number DE-AC02-09CH11466 with the U.S. Department of Energy.

Visualizing deceleration-phase instabilities in inertial confinement fusion implosions using an "enhanced self-emission" technique at the National Ignition Facility

NASA Astrophysics Data System (ADS)

Pickworth, L. A.; Hammel, B. A.; Smalyuk, V. A.; Robey, H. F.; Benedetti, L. R.; Berzak Hopkins, L.; Bradley, D. K.; Field, J. E.; Haan, S. W.; Hatarik, R.; Hartouni, E.; Izumi, N.; Johnson, S.; Khan, S.; Lahmann, B.; Landen, O. L.; Le Pape, S.; MacPhee, A. G.; Meezan, N. B.; Milovich, J.; Nagel, S. R.; Nikroo, A.; Pak, A. E.; Petrasso, R.; Remington, B. A.; Rice, N. G.; Springer, P. T.; Stadermann, M.; Widmann, K.; Hsing, W.

2018-05-01

High-mode perturbations and low-mode asymmetries were measured in the deceleration phase of indirectly driven, deuterium gas filled inertial confinement fusion capsule implosions at convergence ratios of 10 to 15, using a new "enhanced emission" technique at the National Ignition Facility [E. M. Campbell et al., AIP Conf. Proc. 429, 3 (1998)]. In these experiments, a high spatial resolution Kirkpatrick-Baez microscope was used to image the x-ray emission from the inner surface of a high-density-carbon capsule's shell. The use of a high atomic number dopant in the shell enabled time-resolved observations of shell perturbations penetrating into the hot spot. This allowed the effects of the perturbations and asymmetries on degrading neutron yield to be directly measured. In particular, mix induced radiation losses of ˜400 J from the hot spot resulted in a neutron yield reduction of a factor of ˜2. In a subsequent experiment with a significantly increased level of short-mode initial perturbations, shown through the enhanced imaging technique to be highly organized radially, the neutron yield dropped an additional factor of ˜2.

Closed-loop suppression of chaos in nonlinear driven oscillators

NASA Astrophysics Data System (ADS)

Aguirre, L. A.; Billings, S. A.

1995-05-01

This paper discusses the suppression of chaos in nonlinear driven oscillators via the addition of a periodic perturbation. Given a system originally undergoing chaotic motions, it is desired that such a system be driven to some periodic orbit. This can be achieved by the addition of a weak periodic signal to the oscillator input. This is usually accomplished in open loop, but this procedure presents some difficulties which are discussed in the paper. To ensure that this is attained despite uncertainties and possible disturbances on the system, a procedure is suggested to perform control in closed loop. In addition, it is illustrated how a model, estimated from input/output data, can be used in the design. Numerical examples which use the Duffing-Ueda and modified van der Pol oscillators are included to illustrate some of the properties of the new approach.

Adaptive mesh refinement techniques for the immersed interface method applied to flow problems

PubMed Central

Li, Zhilin; Song, Peng

2013-01-01

In this paper, we develop an adaptive mesh refinement strategy of the Immersed Interface Method for flow problems with a moving interface. The work is built on the AMR method developed for two-dimensional elliptic interface problems in the paper [12] (CiCP, 12(2012), 515–527). The interface is captured by the zero level set of a Lipschitz continuous function φ(x, y, t). Our adaptive mesh refinement is built within a small band of |φ(x, y, t)| ≤ δ with finer Cartesian meshes. The AMR-IIM is validated for Stokes and Navier-Stokes equations with exact solutions, moving interfaces driven by the surface tension, and classical bubble deformation problems. A new simple area preserving strategy is also proposed in this paper for the level set method. PMID:23794763

Calculating Pressure-Driven Current Near Magnetic Islands for 3D MHD Equilibria

NASA Astrophysics Data System (ADS)

Radhakrishnan, Dhanush; Reiman, Allan

2016-10-01

In general, 3D MHD equilibria in toroidal plasmas do not result in nested pressure surfaces. Instead, islands and chaotic regions appear in the equilibrium. Near small magnetic islands, the pressure varies within the flux surfaces, which has a significant effect on the pressure-driven current, introducing singularities. Previously, the MHD equilibrium current near a magnetic island was calculated, including the effect of ``stellarator symmetry,'' wherein the singular components of the pressure-driven current vanish [A. H. Reiman, Phys. Plasmas 23, 072502 (2016)]. Here we first solve for pressure in a cylindrical plasma from the heat diffusion equation, after adding a helical perturbation. We then numerically calculate the corresponding Pfirsch-Schluter current. At the small island limit, we compare the pressure-driven current with the previously calculated solution, and far from the island, we recover the solution for nested flux surfaces. Lastly, we compute the current for a toroidal plasma for symmetric and non-symmetric geometries.

The deformation of the front of a 3D interface crack propagating quasistatically in a medium with random fracture properties

NASA Astrophysics Data System (ADS)

Pindra, Nadjime; Lazarus, Véronique; Leblond, Jean-Baptiste

One studies the evolution in time of the deformation of the front of a semi-infinite 3D interface crack propagating quasistatically in an infinite heterogeneous elastic body. The fracture properties are assumed to be lower on the interface than in the materials so that crack propagation is channelled along the interface, and to vary randomly within the crack plane. The work is based on earlier formulae which provide the first-order change of the stress intensity factors along the front of a semi-infinite interface crack arising from some small but otherwise arbitrary in-plane perturbation of this front. The main object of study is the long-time behavior of various statistical measures of the deformation of the crack front. Special attention is paid to the influences of the mismatch of elastic properties, the type of propagation law (fatigue or brittle fracture) and the stable or unstable character of 2D crack propagation (depending on the loading) upon the development of this deformation.

Vertical Transport of Sediment from Muddy Buoyant River Plumes in the Presence of Different Modes of Interfacial Instabilities

NASA Astrophysics Data System (ADS)

Strom, K.; Rouhnia, M.

2016-12-01

Previous studies have suggested that sedimentation from buoyant, muddy plumes lofting over clear saltwater can take place at rates higher than that expected from individual particle settling (i.e., CWs). Two potential drivers of enhanced sedimentation are flocculation and interfacial instabilities. We experimentally measured the sediment fluxes from each of these processes using two sets of laboratory experiments that investigate two different modes of instability, one driven by sediment settling and one driven by fluid shear. The settling-driven and shear-driven instability experiments were carried out in a stagnant stratification tank and a stratification flume respectively. In both sets, continuous interface monitoring and concentration measurements were made to observe developments of instabilities and their effects on the removal of sediment. Floc size was measured during the experiments using a floc camera and image analysis routines. This presentation will provide an overview of the stagnant tank experiments, but will focus on results from the stratified flume experiments and an analysis that attempts to synthesizes the results from the entirety of the study. The results from the stratified flume experiments show that under shear instabilities, the effective settling velocity is greater than the floc settling velocity, and that the rate increases with plume velocity and interface mixing. The difference between effective and floc settling velocity was denoted as the shear-induced settling velocity. This rate was found to be a strong function of the Richardson number, and was attributed to mixing processes at the interface. Conceptual and empirical analysis shows that the shear-induced settling velocity is proportional to URi-2. The resulting effective settling velocity models developed from these experiments are then used to examine the rates and potential locations of operations of these mechanism over the length of a river mouth plume.

Instabilities in dynamic anti-plane sliding of an elastic layer on a dissimilar elastic half-space

NASA Astrophysics Data System (ADS)

Kunnath, R.

2012-12-01

The stability of dynamic anti-plane sliding at an interface between an elastic layer and an elastic half-space with dissimilar elastic properties is studied. Friction at the interface is assumed to follow a rate- and state-dependent law, with a positive instantaneous dependence on slip velocity and a rate weakening behavior in the steady state. The perturbations are of the form exp(ikx+pt), where k is the wavenumber, x is the coordinate along the interface, p is the time response to the perturbation and t is time. The results of the stability analysis are shown in Figs. 1 and 2 with the velocity weakening parameter b/a=5, shear wave speed ratio cs'/cs=1.2, shear modulus ratio μ'/μ=1.2 and non-dimensional layer thickness H=100. The normalized instability growth rate and normalized phase velocity are plotted as a function of wavenumber. Fig.1 is for a non-dimensional unperturbed slip velocity ɛ=5 (rapid sliding) while Fig. 2 is for ɛ=0.05 (slow sliding). The results show the destabilization of interfacial waves. For slow sliding, destabilization of interfacial waves is still seen, indicating that the quasi-static approximation to slow sliding is not valid. This is in agreement with the result of Ranjith (Int. J. Solids and Struct., 2009, 46, 3086-3092) who predicted an instability of long-wavelength Love waves in slow sliding.

Gravitational instability of thin gas layer between two thick liquid layers

NASA Astrophysics Data System (ADS)

Pimenova, A. V.; Goldobin, D. S.

2016-12-01

We consider the problem of gravitational instability (Rayleigh-Taylor instability) of a horizontal thin gas layer between two liquid half-spaces (or thick layers), where the light liquid overlies the heavy one. This study is motivated by the phenomenon of boiling at the surface of direct contact between two immiscible liquids, where the rate of the "break-away" of the vapor layer growing at the contact interface due to development of the Rayleigh-Taylor instability on the upper liquid-gas interface is of interest. The problem is solved analytically under the assumptions of inviscid liquids and viscous weightless vapor. These assumptions correspond well to the processes in real systems, e.g., they are relevant for the case of interfacial boiling in the system water- n-heptane. In order to verify the results, the limiting cases of infinitely thin and infinitely thick gas layers were considered, for which the results can be obviously deduced from the classical problem of the Rayleigh-Taylor instability. These limiting cases are completely identical to the well-studied cases of gravity waves at the liquidliquid and liquid-gas interfaces. When the horizontal extent of the system is long enough, the wavenumber of perturbations is not limited from below, and the system is always unstable. The wavelength of the most dangerous perturbations and the rate of their exponential growth are derived as a function of the layer thickness. The dependence of the exponential growth rate on the gas layer thickness is cubic.

Dose perturbation effect of metallic spinal implants in proton beam therapy.

PubMed

Jia, Yingcui; Zhao, Li; Cheng, Chee-Wai; McDonald, Mark W; Das, Indra J

2015-09-08

The purpose of this study was to investigate the effect of dose perturbations for two metallic spinal screw implants in proton beam therapy in the perpendicular and parallel beam geometry. A 5.5 mm (diameter) by 45 mm (length) stainless steel (SS) screw and a 5.5 mm by 35 mm titanium (Ti) screw commonly used for spinal fixation were CT-scanned in a hybrid phantom of water and solid water. The CT data were processed with an orthopedic metal artifact reduction (O-MAR) algorithm. Treatment plans were generated for each metal screw with a proton beam oriented, first parallel and then perpendicular, to the longitudinal axis of the screw. The calculated dose profiles were compared with measured results from a plane-parallel ion chamber and Gafchromic EBT2 films. For the perpendicular setup, the measured dose immediately downstream from the screw exhibited dose enhancement up to 12% for SS and 8% for Ti, respectively, but such dose perturbation was not observed outside the lateral edges of the screws. The TPS showed 5% and 2% dose reductions immediately at the interface for the SS nd Ti screws, respectively, and up to 9% dose enhancements within 1 cm outside of the lateral edges of the screws. The measured dose enhancement was only observed within 5 mm from the interface along the beam path. At deeper depths, the lateral dose profiles appeared to be similar between the measurement and TPS, with dose reduction in the screw shadow region and dose enhancement within 1-2 cm outside of the lateral edges of the metals. For the parallel setup, no significant dose perturbation was detected at lateral distance beyond 3 mm away from both screws. Significant dose discrepancies exist between TPS calculations and ion chamber and film measurements in close proximity of high-Z inhomogeneities. The observed dose enhancement effect with proton therapy is not correctly modeled by TPS. An extra measure of caution should be taken when evaluating dosimetry with spinal metallic implants.

Clustering of arc volcanoes caused by temperature perturbations in the back-arc mantle

PubMed Central

Lee, Changyeol; Wada, Ikuko

2017-01-01

Clustering of arc volcanoes in subduction zones indicates along-arc variation in the physical condition of the underlying mantle where majority of arc magmas are generated. The sub-arc mantle is brought in from the back-arc largely by slab-driven mantle wedge flow. Dynamic processes in the back-arc, such as small-scale mantle convection, are likely to cause lateral variations in the back-arc mantle temperature. Here we use a simple three-dimensional numerical model to quantify the effects of back-arc temperature perturbations on the mantle wedge flow pattern and sub-arc mantle temperature. Our model calculations show that relatively small temperature perturbations in the back-arc result in vigorous inflow of hotter mantle and subdued inflow of colder mantle beneath the arc due to the temperature dependence of the mantle viscosity. This causes a three-dimensional mantle flow pattern that amplifies the along-arc variations in the sub-arc mantle temperature, providing a simple mechanism for volcano clustering. PMID:28660880

Clustering of arc volcanoes caused by temperature perturbations in the back-arc mantle.

PubMed

Lee, Changyeol; Wada, Ikuko

2017-06-29

Clustering of arc volcanoes in subduction zones indicates along-arc variation in the physical condition of the underlying mantle where majority of arc magmas are generated. The sub-arc mantle is brought in from the back-arc largely by slab-driven mantle wedge flow. Dynamic processes in the back-arc, such as small-scale mantle convection, are likely to cause lateral variations in the back-arc mantle temperature. Here we use a simple three-dimensional numerical model to quantify the effects of back-arc temperature perturbations on the mantle wedge flow pattern and sub-arc mantle temperature. Our model calculations show that relatively small temperature perturbations in the back-arc result in vigorous inflow of hotter mantle and subdued inflow of colder mantle beneath the arc due to the temperature dependence of the mantle viscosity. This causes a three-dimensional mantle flow pattern that amplifies the along-arc variations in the sub-arc mantle temperature, providing a simple mechanism for volcano clustering.

Internal wave energy flux from density perturbations in nonlinear stratifications

NASA Astrophysics Data System (ADS)

Lee, Frank M.; Allshouse, Michael R.; Swinney, Harry L.; Morrison, P. J.

2017-11-01

Tidal flow over the topography at the bottom of the ocean, whose density varies with depth, generates internal gravity waves that have a significant impact on the energy budget of the ocean. Thus, understanding the energy flux (J = p v) is important, but it is difficult to measure simultaneously the pressure and velocity perturbation fields, p and v . In a previous work, a Green's-function-based method was developed to calculate the instantaneous p, v , and thus J , given a density perturbation field for a constant buoyancy frequency N. Here we extend the previous analytic Green's function work to include nonuniform N profiles, namely the tanh-shaped and linear cases, because background density stratifications that occur in the ocean and some experiments are nonlinear. In addition, we present a finite-difference method for the general case where N has an arbitrary profile. Each method is validated against numerical simulations. The methods we present can be applied to measured density perturbation data by using our MATLAB graphical user interface EnergyFlux. PJM was supported by the U.S. Department of Energy Contract DE-FG05-80ET-53088. HLS and MRA were supported by ONR Grant No. N000141110701.

Discrete mode lasers for communications applications

NASA Astrophysics Data System (ADS)

Barry, L. P.; Herbert, C.; Jones, D.; Kaszubowska-Anandarajah, A.; Kelly, B.; O'Carroll, J.; Phelan, R.; Anandarajah, P.; Shi, K.; O'Gorman, J.

2009-02-01

The wavelength spectra of ridge waveguide Fabry Perot lasers can be modified by perturbing the effective refractive index of the guided mode along very small sections of the laser cavity. One way of locally perturbing the effective index of the lasing mode is by etching features into the ridge waveguide such that each feature has a small overlap with the transverse field profile of the unperturbed mode, consequently most of the light in the laser cavity is unaffected by these perturbations. A proportion of the propagating light is however reflected at the boundaries between the perturbed and the unperturbed sections. Suitable positioning of these interfaces allows the mirror loss spectrum of a Fabry Perot laser to be manipulated. In order to achieve single longitudinal mode emission, the mirror loss of a specified mode must be reduced below that of the other cavity modes. Here we review the latest results obtained from devices containing such features. These results clearly demonstrate that these devices exceed the specifications required for a number of FTTH and Datacomms applications, such as GEPON, LX4 and CWDM. As well as this we will also present initial results on the linewidth of these devices.

Testing competing forms of the Milankovitch hypothesis: A multivariate approach

NASA Astrophysics Data System (ADS)

Kaufmann, Robert K.; Juselius, Katarina

2016-02-01

We test competing forms of the Milankovitch hypothesis by estimating the coefficients and diagnostic statistics for a cointegrated vector autoregressive model that includes 10 climate variables and four exogenous variables for solar insolation. The estimates are consistent with the physical mechanisms postulated to drive glacial cycles. They show that the climate variables are driven partly by solar insolation, determining the timing and magnitude of glaciations and terminations, and partly by internal feedback dynamics, pushing the climate variables away from equilibrium. We argue that the latter is consistent with a weak form of the Milankovitch hypothesis and that it should be restated as follows: internal climate dynamics impose perturbations on glacial cycles that are driven by solar insolation. Our results show that these perturbations are likely caused by slow adjustment between land ice volume and solar insolation. The estimated adjustment dynamics show that solar insolation affects an array of climate variables other than ice volume, each at a unique rate. This implies that previous efforts to test the strong form of the Milankovitch hypothesis by examining the relationship between solar insolation and a single climate variable are likely to suffer from omitted variable bias.

Positioning performance of the NTCM model driven by GPS Klobuchar model parameters

NASA Astrophysics Data System (ADS)

Hoque, Mohammed Mainul; Jakowski, Norbert; Berdermann, Jens

2018-03-01

Users of the Global Positioning System (GPS) utilize the Ionospheric Correction Algorithm (ICA) also known as Klobuchar model for correcting ionospheric signal delay or range error. Recently, we developed an ionosphere correction algorithm called NTCM-Klobpar model for single frequency GNSS applications. The model is driven by a parameter computed from GPS Klobuchar model and consecutively can be used instead of the GPS Klobuchar model for ionospheric corrections. In the presented work we compare the positioning solutions obtained using NTCM-Klobpar with those using the Klobuchar model. Our investigation using worldwide ground GPS data from a quiet and a perturbed ionospheric and geomagnetic activity period of 17 days each shows that the 24-hour prediction performance of the NTCM-Klobpar is better than the GPS Klobuchar model in global average. The root mean squared deviation of the 3D position errors are found to be about 0.24 and 0.45 m less for the NTCM-Klobpar compared to the GPS Klobuchar model during quiet and perturbed condition, respectively. The presented algorithm has the potential to continuously improve the accuracy of GPS single frequency mass market devices with only little software modification.

The Ionospheric Impact of an ICME-Driven Sheath Region Over Indian and American Sectors in the Absence of a Typical Geomagnetic Storm

NASA Astrophysics Data System (ADS)

Rout, Diptiranjan; Chakrabarty, D.; Sarkhel, S.; Sekar, R.; Fejer, B. G.; Reeves, G. D.; Kulkarni, Atul S.; Aponte, Nestor; Sulzer, Mike; Mathews, John D.; Kerr, Robert B.; Noto, John

2018-05-01

On 13 April 2013, the ACE spacecraft detected arrival of an interplanetary shock at 2250 UT, which is followed by the passage of the sheath region of an interplanetary coronal mass ejection (ICME) for a prolonged (18-hr) period. The polarity of interplanetary magnetic field Bz was northward inside the magnetic cloud region of the ICME. The ring current (SYM-H) index did not go below -7 nT during this event suggesting the absence of a typical geomagnetic storm. The responses of the global ionospheric electric field associated with the passage of the ICME sheath region have been investigated using incoherent scatter radar measurements of Jicamarca and Arecibo (postmidnight sector) along with the variations of equatorial electrojet strength over India (day sector). It is found that westward and eastward prompt penetration (PP) electric fields affected ionosphere over Jicamarca/Arecibo and Indian sectors, respectively, during 0545-0800 UT. The polarities of the PP electric field perturbations over the day/night sectors are consistent with model predictions. In fact, DP2-type electric field perturbations with ˜40-min periodicity are found to affect the ionosphere over both the sectors for about 2.25 hr during the passage of the ICME sheath region. This result shows that SYM-H index may not capture the full geoeffectivenss of the ICME sheath-driven storms and suggests that the PP electric field perturbations should be evaluated for geoeffectiveness of ICME when the polarity of interplanetary magnetic field Bz is northward inside the magnetic cloud region of the ICME.

Increased electron temperature turbulence during suppression of edge localized mode by resonant magnetic perturbations in the DIII-D tokamak [Increased electron temperature turbulence during edge localized mode (ELM) suppression by resonant magnetic perturbations (RMPs) in the DIII-D tokamak

DOE PAGES

Sung, Choongki; Wang, G.; Rhodes, Terry L.; ...

2017-11-16

We report the first observation of increased edge electron temperature turbulence correlated with changes in gradients and the ELM suppression time which occurs after the application of resonant magnetic perturbations (RMP) on DIII-D H-mode plasmas. This increase (T ~ e/T e approximately doubles) occurs in the region extending from the top of the pedestal outward to the upper part of the edge steep gradient region. This is significant as it is consistent with increased turbulence driven transport potentially replacing some part of the edge localized mode (ELM) driven transport. However, temperature turbulence does not change with the initial RMP applicationmore » while ELMs are still present, indicating the turbulence changes are not causative in the development of ELM suppression or initial profile evolution with RMP – but rather a response to these effects. This temperature turbulence is broadband and long wavelength, k θρ s < 0.5, where k θ = poloidal wavenumber, ρ s = ion sound gyroradius. As has been reported previously, long wavelength density turbulence (k θρ s < 1.0) in the same location also increases after ELMs were suppressed by the RMP. Since the decrease of the density starts nearly immediately with RMP application, these results suggest that the so-called RMP “density pump-out” is not linked to these long wavelength turbulent transport changes. Comparison with linear stability analysis finds both consistencies and inconsistencies in this important region.« less

Non-axisymmetric line-driven disc winds - I. Disc perturbations

NASA Astrophysics Data System (ADS)

Dyda, Sergei; Proga, Daniel

2018-04-01

We study mass outflows driven from accretion discs by radiation pressure due to spectral lines. To investigate non-axisymmetric effects, we use the ATHENA++ code and develop a new module to account for radiation pressure driving. In 2D, our new simulations are consistent with previous 2D axisymmetric solutions by Proga et al., who used the ZEUS 2D code. Specifically, we find that the disc winds are time dependent, characterized by a dense stream confined to ˜45° relative to the disc mid-plane and bounded on the polar side by a less dense, fast stream. In 3D, we introduce a vertical, ϕ-dependent, subsonic velocity perturbation in the disc mid-plane. The perturbation does not change the overall character of the solution but global outflow properties such as the mass, momentum, and kinetic energy fluxes are altered by up to 100 per cent. Non-axisymmetric density structures develop and persist mainly at the base of the wind. They are relatively small, and their densities can be a few times higher than the azimuthal average. The structure of the non-axisymmetric and axisymmetric solutions differ also in other ways. Perhaps most importantly from the observational point of view are the differences in the so-called clumping factors, that serve as a proxy for emissivity due to two body processes. In particular, the spatially averaged clumping factor over the entire fast stream, while it is of a comparable value in both solutions, it varies about 10 times faster in the non-axisymmetric case.

Increased electron temperature turbulence during suppression of edge localized mode by resonant magnetic perturbations in the DIII-D tokamak [Increased electron temperature turbulence during edge localized mode (ELM) suppression by resonant magnetic perturbations (RMPs) in the DIII-D tokamak

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sung, Choongki; Wang, G.; Rhodes, Terry L.

We report the first observation of increased edge electron temperature turbulence correlated with changes in gradients and the ELM suppression time which occurs after the application of resonant magnetic perturbations (RMP) on DIII-D H-mode plasmas. This increase (T ~ e/T e approximately doubles) occurs in the region extending from the top of the pedestal outward to the upper part of the edge steep gradient region. This is significant as it is consistent with increased turbulence driven transport potentially replacing some part of the edge localized mode (ELM) driven transport. However, temperature turbulence does not change with the initial RMP applicationmore » while ELMs are still present, indicating the turbulence changes are not causative in the development of ELM suppression or initial profile evolution with RMP – but rather a response to these effects. This temperature turbulence is broadband and long wavelength, k θρ s < 0.5, where k θ = poloidal wavenumber, ρ s = ion sound gyroradius. As has been reported previously, long wavelength density turbulence (k θρ s < 1.0) in the same location also increases after ELMs were suppressed by the RMP. Since the decrease of the density starts nearly immediately with RMP application, these results suggest that the so-called RMP “density pump-out” is not linked to these long wavelength turbulent transport changes. Comparison with linear stability analysis finds both consistencies and inconsistencies in this important region.« less

Ultrafast and low barrier motions in the photoreactions of the green fluorescent protein.

PubMed

van Thor, Jasper J; Georgiev, Georgi Y; Towrie, Michael; Sage, J Timothy

2005-09-30

Green fluorescent protein (GFP) fluoresces efficiently under blue excitation despite major electrostatic rearrangements resulting from photoionization of the chromophore and neutralization of Glu-222. A competing phototransformation process, which ionizes the chromophore and decarboxylates Glu-222, mimics the electrostatic and structural changes in the fluorescence photocycle. Structural and spectroscopic analysis of the cryogenically stabilized photoproduct at 100 K and a structurally annealed intermediate of the phototransformed protein at 170 K reveals distinct structural relaxations involving protein, chromophore, solvent, and photogenerated CO2. Strong structural changes of the 100 K photoproduct after decarboxylation appear exclusively within 15 angstroms of the chromophore and include the electrostatically driven perturbations of Gln-69, Cys-70, and water molecules in an H-bonding network connecting the chromophore. X-ray crystallography to 1.85 angstroms resolution and static and picosecond time-resolved IR spectroscopy identify structural mechanisms common to phototransformation and to the fluorescence photocycle. In particular, the appearance of a 1697 cm(-1) (+) difference band in both photocycle and phototransformation intermediates is a spectroscopic signature for the structural perturbation of Gln-69. This is taken as evidence for an electrostatically driven dynamic response that is common to both photoreaction pathways. The interactions between the chromophore and the perturbed residues and solvent are decreased or removed in the T203H single and T203H/Q69L double mutants, resulting in a strong reduction of the fluorescence quantum yield. This suggests that the electrostatic response to the transient formation of a buried charge in the wild type is important for the bright fluorescence.

Proximity effects across oxide-interfaces of superconductor-insulator-ferromagnet hybrid heterostructure.

PubMed

Prajapat, C L; Singh, Surendra; Bhattacharya, D; Ravikumar, G; Basu, S; Mattauch, S; Zheng, Jian-Guo; Aoki, T; Paul, Amitesh

2018-02-27

A case study of electron tunneling or charge-transfer-driven orbital ordering in superconductor (SC)-ferromagnet (FM) interfaces has been conducted in heteroepitaxial YBa 2 Cu 3 O 7 (YBCO)/La 0.67 Sr 0.33 MnO 3 (LSMO) multilayers interleaved with and without an insulating SrTiO 3 (STO) layer between YBCO and LSMO. X-ray magnetic circular dichroism experiments revealed anti-parallel alignment of Mn magnetic moments and induced Cu magnetic moments in a YBCO/LSMO multilayer. As compared to an isolated LSMO layer, the YBCO/LSMO multilayer displayed a (50%) weaker Mn magnetic signal, which is related to the usual proximity effect. It was a surprise that a similar proximity effect was also observed in a YBCO/STO/LSMO multilayer, however, the Mn signal was reduced by 20%. This reduced magnetic moment of Mn was further verified by depth sensitive polarized neutron reflectivity. Electron energy loss spectroscopy experiment showed the evidence of Ti magnetic polarization at the interfaces of the YBCO/STO/LSMO multilayer. This crossover magnetization is due to a transfer of interface electrons that migrate from Ti (4+)-δ to Mn at the STO/LSMO interface and to Cu 2+ at the STO/YBCO interface, with hybridization via O 2p orbitals. So charge-transfer driven orbital ordering is the mechanism responsible for the observed proximity effect and Mn-Cu anti-parallel coupling in YBCO/STO/LSMO. This work provides an effective pathway in understanding the aspect of long range proximity effect and consequent orbital degeneracy parameter in magnetic coupling.

Droplet and multiphase effects in a shock-driven hydrodynamic instability with reshock

NASA Astrophysics Data System (ADS)

Middlebrooks, John B.; Avgoustopoulos, Constantine G.; Black, Wolfgang J.; Allen, Roy C.; McFarland, Jacob A.

2018-06-01

Shock-driven multiphase instabilities (SDMI) are unique physical phenomena that have far-reaching applications in engineering and science such as high energy explosions, scramjet combustors, and supernovae events. The SDMI arises when a multiphase field is impulsively accelerated by a shock wave and evolves as a result of gradients in particle-gas momentum transfer. A new shock tube facility has been constructed to study the SDMI. Experiments were conducted to investigate liquid particle and multiphase effects in the SDMI. A multiphase cylindrical interface was created with water droplet laden air in our horizontal shock tube facility. The interface was accelerated by a Mach 1.66 shock wave, and its reflection from the end wall. The interface development was captured using laser illumination and a high-resolution CCD camera. Laser interferometry was used to determine the droplet size distribution. A particle filtration technique was used to determine mass loading within an interface and verify particle size distribution. The effects of particle number density, particle size, and a secondary acceleration (reshock) of the interface were noted. Particle number density effects were found comparable to Atwood number effects in the Richtmyer-Meshkov instability for small (˜ 1.7 {μ }m) droplets. Evaporation was observed to alter droplet sizes and number density, markedly after reshock. For large diameter droplets (˜ 10.7 {μ }m), diminished development was observed with larger droplets lagging far behind the interface. These lagging droplets were also observed to breakup after reshock into structured clusters of smaller droplets. Mixing width values were reported to quantify mixing effects seen in images.

Extracting information from AGN variability

NASA Astrophysics Data System (ADS)

Kasliwal, Vishal P.; Vogeley, Michael S.; Richards, Gordon T.

2017-09-01

Active galactic nuclei (AGNs) exhibit rapid, high-amplitude stochastic flux variations across the entire electromagnetic spectrum on time-scales ranging from hours to years. The cause of this variability is poorly understood. We present a Green's function-based method for using variability to (1) measure the time-scales on which flux perturbations evolve and (2) characterize the driving flux perturbations. We model the observed light curve of an AGN as a linear differential equation driven by stochastic impulses. We analyse the light curve of the Kepler AGN Zw 229-15 and find that the observed variability behaviour can be modelled as a damped harmonic oscillator perturbed by a coloured noise process. The model power spectrum turns over on time-scale 385 d. On shorter time-scales, the log-power-spectrum slope varies between 2 and 4, explaining the behaviour noted by previous studies. We recover and identify both the 5.6 and 67 d time-scales reported by previous work using the Green's function of the Continuous-time AutoRegressive Moving Average equation rather than by directly fitting the power spectrum of the light curve. These are the time-scales on which flux perturbations grow, and on which flux perturbations decay back to the steady-state flux level, respectively. We make the software package kālī used to study light curves using our method available to the community.

Excitation of transverse dipole and quadrupole modes in a pure ion plasma in a linear Paul trap to study collective processes in intense beams

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gilson, Erik P.; Davidson, Ronald C.; Efthimion, Philip C.

Transverse dipole and quadrupole modes have been excited in a one-component cesium ion plasma trapped in the Paul Trap Simulator Experiment (PTSX) in order to characterize their properties and understand the effect of their excitation on equivalent long-distance beam propagation. The PTSX device is a compact laboratory Paul trap that simulates the transverse dynamics of a long, intense charge bunch propagating through an alternating-gradient transport system by putting the physicist in the beam's frame of reference. A pair of arbitrary function generators was used to apply trapping voltage waveform perturbations with a range of frequencies and, by changing which electrodesmore » were driven with the perturbation, with either a dipole or quadrupole spatial structure. The results presented in this paper explore the dependence of the perturbation voltage's effect on the perturbation duration and amplitude. Perturbations were also applied that simulate the effect of random lattice errors that exist in an accelerator with quadrupole magnets that are misaligned or have variance in their field strength. The experimental results quantify the growth in the equivalent transverse beam emittance that occurs due to the applied noise and demonstrate that the random lattice errors interact with the trapped plasma through the plasma's internal collective modes. Coherent periodic perturbations were applied to simulate the effects of magnet errors in circular machines such as storage rings. The trapped one component plasma is strongly affected when the perturbation frequency is commensurate with a plasma mode frequency. The experimental results, which help to understand the physics of quiescent intense beam propagation over large distances, are compared with analytic models.« less

The Richtmyer-Meshkov Instability on a Circular Interface in Magnetohydrodynamics

NASA Astrophysics Data System (ADS)

Black, Wolfgang; Maxon, W. Curtis; Denissen, Nicholas; McFarland, Jacob

2017-11-01

Hydrodynamic instabilities (HI) are ubiquitous in high energy density (HED) applications such as astrophysics, thermonuclear weapons, and inertial fusion. In these systems, fluid mixing is encouraged by the HI which can reduce the energy yield and eventually drive the system to equilibrium. The Richtmyer-Meshkov (RM) instability is one such HI and is created when a perturbed interface between a density gradient is impulsively accelerated. The physics can be complicated one step further by the inclusion of Magnetohydrodynamics (MHD), where HED systems experience the effects of magnetic and electric fields. These systems provide unique challenges and as such can be used to validate hydrodynamic codes capable of predicting HI. The work presented here will outline efforts to study the RMI in MHD for a circular interface utilizing the hydrocode FLAG, developed at Los Alamos National Laboratory.

Just-in-time Database-Driven Web Applications

PubMed Central

2003-01-01

"Just-in-time" database-driven Web applications are inexpensive, quickly-developed software that can be put to many uses within a health care organization. Database-driven Web applications garnered 73873 hits on our system-wide intranet in 2002. They enabled collaboration and communication via user-friendly Web browser-based interfaces for both mission-critical and patient-care-critical functions. Nineteen database-driven Web applications were developed. The application categories that comprised 80% of the hits were results reporting (27%), graduate medical education (26%), research (20%), and bed availability (8%). The mean number of hits per application was 3888 (SD = 5598; range, 14-19879). A model is described for just-in-time database-driven Web application development and an example given with a popular HTML editor and database program. PMID:14517109

Escape jumping by three age-classes of water striders from smooth, wavy and bubbling water surfaces.

PubMed

Ortega-Jimenez, Victor Manuel; von Rabenau, Lisa; Dudley, Robert

2017-08-01

Surface roughness is a ubiquitous phenomenon in both oceanic and terrestrial waters. For insects that live at the air-water interface, such as water striders, non-linear and multi-scale perturbations produce dynamic surface deformations which may impair locomotion. We studied escape jumps of adults, juveniles and first-instar larvae of the water strider Aquarius remigis on smooth, wave-dominated and bubble-dominated water surfaces. Effects of substrate on takeoff jumps were substantial, with significant reductions in takeoff angles, peak translational speeds, attained heights and power expenditure on more perturbed water surfaces. Age effects were similarly pronounced, with the first-instar larvae experiencing the greatest degradation in performance; age-by-treatment effects were also significant for many kinematic variables. Although commonplace in nature, perturbed water surfaces thus have significant and age-dependent effects on water strider locomotion, and on behavior more generally of surface-dwelling insects. © 2017. Published by The Company of Biologists Ltd.

Global and critical test of the perturbation density-functional theory based on extensive simulation of Lennard-Jones fluid near an interface and in confined systems.

PubMed

Zhou, Shiqi; Jamnik, Andrej

2005-09-22

The structure of a Lennard-Jones (LJ) fluid subjected to diverse external fields maintaining the equilibrium with the bulk LJ fluid is studied on the basis of the third-order+second-order perturbation density-functional approximation (DFA). The chosen density and potential parameters for the bulk fluid correspond to the conditions situated at "dangerous" regions of the phase diagram, i.e., near the critical temperature or close to the gas-liquid coexistence curve. The accuracy of DFA predictions is tested against the results of a grand canonical ensemble Monte Carlo simulation. It is found that the DFA theory presented in this work performs successfully for the nonuniform LJ fluid only on the condition of high accuracy of the required bulk second-order direct correlation function. The present report further indicates that the proposed perturbation DFA is efficient and suitable for both supercritical and subcritical temperatures.

A Fluorescence Recovery After Photobleaching (FRAP) Technique for the Measurement of Solute Transport Across Surfactant-Laden Interfaces

NASA Technical Reports Server (NTRS)

Browne, Edward P.; Hatton, T. Alan

1996-01-01

The technique of Fluorescence Recovery After Photobleaching (FRAP) has been applied to the measurement of interfacial transport in two-phase systems. FRAP exploits the loss of fluorescence exhibited by certain fluorophores when over-stimulated (photobleached), so that a two-phase system, originally at equilibrium, can be perturbed without disturbing the interface by strong light from an argon-ion laser and its recovery monitored by a microscope-mounted CCD camera as it relaxes to a new equilibrium. During this relaxation, the concentration profiles of the probe solute are measured on both sides of the interface as a function of time, yielding information about the transport characteristics of the system. To minimize the size of the meniscus between the two phases, a photolithography technique is used to selectively treat the glass walls of the cell in which the phases are contained. This allows concentration measurements to be made very close to the interface and increases the sensitivity of the FRAP technique.

Interaction of Porosity with a Planar Solid/Liquid Interface

NASA Technical Reports Server (NTRS)

Catalina, Adrian V.; Stefanescu, Doru M.; Sen, Subhayu; Kaukler, William F.

2004-01-01

In this article, an investigation of the interaction between gas porosity and a planar solid/liquid (SL) interface is reported. A two-dimensional numerical model able to accurately track sharp SL interfaces during solidification of pure metals and alloys is proposed. The finite-difference method and a rectangular undeformed grid are used for computation. The SL interface is described through the points of intersection with the grid lines. Its motion is determined by the thermal and solute gradients at each particular point. Changes of the interface temperature because of capillarity or solute redistribution as well as any perturbation of the thermal and solute field produced by the presence of non-metallic inclusions can be computed. To validate the model, the dynamics of the interaction between a gas pore and a solidification front in metal alloys was observed using a state of the art X-ray transmission microscope (XTM). The experiments included observation of the distortion of the SL interface near a pore, real-time measurements of the growth rate, and the change in shape of the porosity during interaction with the SL interface in pure Al and Al-0.25 wt pct Au alloy. In addition, porosity-induced solute segregation patterns surrounding a pore were also quantified.

Functional recovery in upper limb function in stroke survivors by using brain-computer interface A single case A-B-A-B design.

PubMed

Ono, Takashi; Mukaino, Masahiko; Ushiba, Junichi

2013-01-01

Resent studies suggest that brain-computer interface (BCI) training for chronic stroke patient is useful to improve their motor function of paretic hand. However, these studies does not show the extent of the contribution of the BCI clearly because they prescribed BCI with other rehabilitation systems, e.g. an orthosis itself, a robotic intervention, or electrical stimulation. We therefore compared neurological effects between interventions with neuromuscular electrical stimulation (NMES) with motor imagery and BCI-driven NMES, employing an ABAB experimental design. In epoch A, the subject received NMES on paretic extensor digitorum communis (EDC). The subject was asked to attempt finger extension simultaneously. In epoch B, the subject received NMES when BCI system detected motor-related electroencephalogram change while attempting motor imagery. Both epochs were carried out for 60 min per day, 5 days per week. As a result, EMG activity of EDC was enhanced by BCI-driven NMES and significant cortico-muscular coherence was observed at the final evaluation. These results indicate that the training by BCI-driven NMES is effective even compared to motor imagery combined with NMES, suggesting the superiority of closed-loop training with BCI-driven NMES to open-loop NMES for chronic stroke patients.

Estimation of metal strength at very high rates using free-surface Richtmyer–Meshkov Instabilities

DOE PAGES

Prime, Michael Bruce; Buttler, William Tillman; Buechler, Miles Allen; ...

2017-03-08

Recently, Richtmyer–Meshkov Instabilities (RMI) have been proposed for studying the average strength at strain rates up to at least 10 7/s. RMI experiments involve shocking a metal interface that has initial sinusoidal perturbations. The perturbations invert and grow subsequent to shock and may arrest because of strength effects. In this work we present new RMI experiments and data on a copper target that had five regions with different perturbation amplitudes on the free surface opposite the shock. We estimate the high-rate, low-pressure copper strength by comparing experimental data with Lagrangian numerical simulations. From a detailed computational study we find thatmore » mesh convergence must be carefully addressed to accurately compare with experiments, and numerical viscosity has a strong influence on convergence. We also find that modeling the as-built perturbation geometry rather than the nominal makes a significant difference. Because of the confounding effect of tensile damage on total spike growth, which has previously been used as the metric for estimating strength, we instead use a new strength metric: the peak velocity during spike growth. Furthermore, this new metric also allows us to analyze a broader set of experimental results that are sensitive to strength because some larger initial perturbations grow unstably to failure and so do not have a finite total spike growth.« less

Estimation of metal strength at very high rates using free-surface Richtmyer–Meshkov Instabilities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Prime, Michael Bruce; Buttler, William Tillman; Buechler, Miles Allen

Recently, Richtmyer–Meshkov Instabilities (RMI) have been proposed for studying the average strength at strain rates up to at least 10 7/s. RMI experiments involve shocking a metal interface that has initial sinusoidal perturbations. The perturbations invert and grow subsequent to shock and may arrest because of strength effects. In this work we present new RMI experiments and data on a copper target that had five regions with different perturbation amplitudes on the free surface opposite the shock. We estimate the high-rate, low-pressure copper strength by comparing experimental data with Lagrangian numerical simulations. From a detailed computational study we find thatmore » mesh convergence must be carefully addressed to accurately compare with experiments, and numerical viscosity has a strong influence on convergence. We also find that modeling the as-built perturbation geometry rather than the nominal makes a significant difference. Because of the confounding effect of tensile damage on total spike growth, which has previously been used as the metric for estimating strength, we instead use a new strength metric: the peak velocity during spike growth. Furthermore, this new metric also allows us to analyze a broader set of experimental results that are sensitive to strength because some larger initial perturbations grow unstably to failure and so do not have a finite total spike growth.« less

Perturbation theory and numerical modelling of weakly and moderately nonlinear incompressible Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Herrmann, M.; Velikovich, A. L.; Abarzhi, S. I.

2014-10-01

A study of incompressible two-dimensional Richtmyer-Meshkov instability by means of high-order Eulerian perturbation theory and numerical simulations is reported. Nonlinear corrections to Richtmyer's impulsive formula for the bubble and spike growth rates have been calculated analytically for arbitrary Atwood number and an explicit formula has been obtained for it in the Boussinesq limit. Conditions for early-time acceleration and deceleration of the bubble and the spike have been derived. In our simulations we have solved 2D unsteady Navier-Stokes equations for immiscible incompressible fluids using the finite volume fractional step flow solver NGA developed by, coupled to the level set based interface solver LIT,. The impact of small amounts of viscosity and surface tension on the RMI flow dynamics is studied numerically. Simulation results are compared to the theory to demonstrate successful code verification and highlight the influence of the theory's ideal inviscid flow assumption. Theoretical time histories of the interface curvature at the bubble and spike tip and the profiles of vertical and horizontal velocities have been favorably compared to simulation results, which converge to the theoretical predictions as the Reynolds and Weber numbers are increased. Work supported by the US DOE/NNSA.

Repeated whole cigarette smoke exposure alters cell differentiation and augments secretion of inflammatory mediators in air-liquid interface three-dimensional co-culture model of human bronchial tissue.

PubMed

Ishikawa, Shinkichi; Ito, Shigeaki

2017-02-01

In vitro models of human bronchial epithelium are useful for toxicological testing because of their resemblance to in vivo tissue. We constructed a model of human bronchial tissue which has a fibroblast layer embedded in a collagen matrix directly below a fully-differentiated epithelial cell layer. The model was applied to whole cigarette smoke (CS) exposure repeatedly from an air-liquid interface culture while bronchial epithelial cells were differentiating. The effects of CS exposure on differentiation were determined by histological and gene expression analyses on culture day 21. We found a decrease in ciliated cells and perturbation of goblet cell differentiation. We also analyzed the effects of CS exposure on the inflammatory response, and observed a significant increase in secretion of IL-8, GRO-α, IL-1β, and GM-CSF. Interestingly, secretion of these mediators was augmented with repetition of whole CS exposure. Our data demonstrate the usefulness of our bronchial tissue model for in vitro testing and the importance of exposure repetition in perturbing the differentiation and inflammation processes. Copyright © 2016 Elsevier B.V. All rights reserved.

Optical biosensors for cell adhesion.

PubMed

Ramsden, Jeremy J; Horvath, Robert

2009-01-01

Planar optical waveguides offer an ideal substratum for cells on which to reside. The materials from which the waveguides are made--high refractive index transparent dielectrics--correspond to the coatings of medical implants (e.g., the oxides of niobium, tantalum, and titanium) or the high molecular weight polymers used for culture flasks (e.g., polystyrene). The waveguides can furthermore be modified both chemically and morphologically while retaining their full capability for generating an evanescent optical field that has its greatest strength at the interface between the solid substratum and the liquid phase with which it is invariably in contact (i.e., the culture medium bathing the cells), decaying exponentially perpendicular to the interface at a rate controllable by varying the material parameters of the waveguide. Analysis of the perturbation of the evanescent field by the presence of living cells within it enables their size, number density, shape, refractive index (linked to their constitution) and so forth to be determined, the number of parameters depending on the number of waveguide lightmodes analyzed. No labeling of any kind is necessary, and convenient measurement setups are fully compatible with maintaining the cells in their usual environment. If the temporal evolution of the perturbation is analyzed, even more information can be obtained, such as the amount of material (microexudate) secreted by the cell while residing on the surface. Separation of parallel effects simultaneously contributing to the perturbation of the evanescent field can be accomplished by analysis of coupling peak shape when a grating coupler is used to measure the propagation constants of the waveguide lightmodes.

On the interface between perturbative and nonperturbative QCD

DOE Office of Scientific and Technical Information (OSTI.GOV)

Deur, Alexandre; Brodsky, Stanley J.; de Teramond, Guy F.

2016-04-04

The QCD running couplingmore » $$\\alpha_s(Q^2)$$ sets the strength of the interactions of quarks and gluons as a function of the momentum transfer $Q$. The $Q^2$ dependence of the coupling is required to describe hadronic interactions at both large and short distances. In this article we adopt the light-front holographic approach to strongly-coupled QCD, a formalism which incorporates confinement, predicts the spectroscopy of hadrons composed of light quarks, and describes the low-$Q^2$ analytic behavior of the strong coupling $$\\alpha_s(Q^2)$$. The high-$Q^2$ dependence of the coupling $$\\alpha_s(Q^2)$$ is specified by perturbative QCD and its renormalization group equation. The matching of the high and low $Q^2$ regimes of $$\\alpha_s(Q^2)$$ then determines the scale $$Q_0$$ which sets the interface between perturbative and nonperturbative hadron dynamics. The value of $$Q_0$$ can be used to set the factorization scale for DGLAP evolution of hadronic structure functions and the ERBL evolution of distribution amplitudes. We discuss the scheme-dependence of the value of $$Q_0$$ and the infrared fixed-point of the QCD coupling. Our analysis is carried out for the $$\\bar{MS}$$, $$g_1$$, $MOM$ and $V$ renormalization schemes. Our results show that the discrepancies on the value of $$\\alpha_s$$ at large distance seen in the literature can be explained by different choices of renormalization schemes. Lastly, we also provide the formulae to compute $$\\alpha_s(Q^2)$$ over the entire range of space-like momentum transfer for the different renormalization schemes discussed in this article.« less

Long-lived fluctuations driven by shear flows

NASA Astrophysics Data System (ADS)

Kim, J.-H.; Horton, W.; Morrison, P.; Chagelishvili, G. D.; Gogoberidze, G.; Dahlburg, R.

2004-11-01

In flows that are stable in accordance to the Rayleigh criterion there are long lived transient fluctuations that can lead to the onset of turbulence. We show examples of transitions to turbulence due to the positive nonlinear feedback from the transients. Simulations show that the intensity of the nonlinear decay processes depends on the angle between wave vectors of the interacting spatial Fourier harmonics. Positive nonlinear feedback occurs when vorticities of the perturbation are the same direction. Above some amplitude the cyclonic perturbation is self-sustained due to the feedback loop. Generalization and applications of the simulations for atmospheric and plasma flows are discussed. This work was supported in part by the Department of Energy Grant No. DE-FG03-96ER-54346 and ISTC Grant G-5333.

Direct effects dominate responses to climate perturbations in grassland plant communities.

PubMed

Chu, Chengjin; Kleinhesselink, Andrew R; Havstad, Kris M; McClaran, Mitchel P; Peters, Debra P; Vermeire, Lance T; Wei, Haiyan; Adler, Peter B

2016-06-08

Theory predicts that strong indirect effects of environmental change will impact communities when niche differences between competitors are small and variation in the direct effects experienced by competitors is large, but empirical tests are lacking. Here we estimate negative frequency dependence, a proxy for niche differences, and quantify the direct and indirect effects of climate change on each species. Consistent with theory, in four of five communities indirect effects are strongest for species showing weak negative frequency dependence. Indirect effects are also stronger in communities where there is greater variation in direct effects. Overall responses to climate perturbations are driven primarily by direct effects, suggesting that single species models may be adequate for forecasting the impacts of climate change in these communities.

Nanointerface-driven reversible hydrogen storage in the nanoconfined Li-N-H system

DOE PAGES

Wood, Brandon C.; Stavila, Vitalie; Poonyayant, Natchapol; ...

2017-01-20

Internal interfaces in the Li 3N/[LiNH 2 + 2LiH] solid-state hydrogen storage system alter the hydrogenation and dehydrogenation reaction pathways upon nanosizing, suppressing undesirable intermediate phases to dramatically improve kinetics and reversibility. Finally, the key role of solid interfaces in determining thermodynamics and kinetics suggests a new paradigm for optimizing complex hydrides for solid-state hydrogen storage by engineering internal microstructure.

Vitronectin as a Micromanager of Cell Response in Material-Driven Fibronectin Nanonetworks.

PubMed

Cantini, Marco; Gomide, Karina; Moulisova, Vladimira; González-García, Cristina; Salmerón-Sánchez, Manuel

2017-09-01

Surface functionalization strategies of synthetic materials for regenerative medicine applications comprise the development of microenvironments that recapitulate the physical and biochemical cues of physiological extracellular matrices. In this context, material-driven fibronectin (FN) nanonetworks obtained from the adsorption of the protein on poly(ethyl acrylate) provide a robust system to control cell behavior, particularly to enhance differentiation. This study aims at augmenting the complexity of these fibrillar matrices by introducing vitronectin, a lower-molecular-weight multifunctional glycoprotein and main adhesive component of serum. A cooperative effect during co-adsorption of the proteins is observed, as the addition of vitronectin leads to increased fibronectin adsorption, improved fibril formation, and enhanced vitronectin exposure. The mobility of the protein at the material interface increases, and this, in turn, facilitates the reorganization of the adsorbed FN by cells. Furthermore, the interplay between interface mobility and engagement of vitronectin receptors controls the level of cell fusion and the degree of cell differentiation. Ultimately, this work reveals that substrate-induced protein interfaces resulting from the cooperative adsorption of fibronectin and vitronectin fine-tune cell behavior, as vitronectin micromanages the local properties of the microenvironment and consequently short-term cell response to the protein interface and higher order cellular functions such as differentiation.

IMPACT: Integrated Modeling of Perturbations in Atmospheres for Conjunction Tracking

NASA Astrophysics Data System (ADS)

Koller, J.; Brennan, S.; Godinez, H. C.; Higdon, D. M.; Klimenko, A.; Larsen, B.; Lawrence, E.; Linares, R.; McLaughlin, C. A.; Mehta, P. M.; Palmer, D.; Ridley, A. J.; Shoemaker, M.; Sutton, E.; Thompson, D.; Walker, A.; Wohlberg, B.

2013-12-01

Low-Earth orbiting satellites suffer from atmospheric drag due to thermospheric density which changes on the order of several magnitudes especially during space weather events. Solar flares, precipitating particles and ionospheric currents cause the upper atmosphere to heat up, redistribute, and cool again. These processes are intrinsically included in empirical models, e.g. MSIS and Jacchia-Bowman type models. However, sensitivity analysis has shown that atmospheric drag has the highest influence on satellite conjunction analysis and empirical model still do not adequately represent a desired accuracy. Space debris and collision avoidance have become an increasingly operational reality. It is paramount to accurately predict satellite orbits and include drag effect driven by space weather. The IMPACT project (Integrated Modeling of Perturbations in Atmospheres for Conjunction Tracking), funded with over $5 Million by the Los Alamos Laboratory Directed Research and Development office, has the goal to develop an integrated system of atmospheric drag modeling, orbit propagation, and conjunction analysis with detailed uncertainty quantification to address the space debris and collision avoidance problem. Now with over two years into the project, we have developed an integrated solution combining physics-based density modeling of the upper atmosphere between 120-700 km altitude, satellite drag forecasting for quiet and disturbed geomagnetic conditions, and conjunction analysis with non-Gaussian uncertainty quantification. We are employing several novel approaches including a unique observational sensor developed at Los Alamos; machine learning with a support-vector machine approach of the coupling between solar drivers of the upper atmosphere and satellite drag; rigorous data assimilative modeling using a physics-based approach instead of empirical modeling of the thermosphere; and a computed-tomography method for extracting temporal maps of thermospheric densities using ground based observations. The developed IMPACT framework is an open research framework enabling the exchange and testing of a variety of atmospheric density models, orbital propagators, drag coefficient models, ground based observations, etc. and study their effect on conjunctions and uncertainty predictions. The framework is based on a modern service-oriented architecture controlled by a web interface and providing 3D visualizations. The goal of this project is to revolutionize the ability to monitor and track space objects during highly disturbed space weather conditions, provide suitable forecasts for satellite drag conditions and conjunction analysis, and enable the exchange of models, codes, and data in an open research environment. We will present capabilities and results of the IMPACT framework including a demo of the control interface and visualizations.

Ultrafast chemical reactions in shocked nitromethane probed with dynamic ellipsometry and transient absorption spectroscopy.

PubMed

Brown, Kathryn E; McGrane, Shawn D; Bolme, Cynthia A; Moore, David S

2014-04-10

Initiation of the shock driven chemical reactions and detonation of nitromethane (NM) can be sensitized by the addition of a weak base; however, the chemical mechanism by which sensitization occurs remains unclear. We investigated the shock driven chemical reaction in NM and in NM sensitized with diethylenetriamine (DETA), using a sustained 300 ps shock driven by a chirped Ti:sapphire laser. We measured the solutions' visible transient absorption spectra and measured interface particle and shock velocities of the nitromethane solutions using ultrafast dynamic ellipsometry. We found there to be a volume-increasing reaction that takes place around interface particle velocity up = 2.4 km/s and up = 2.2 km/s for neat NM and NM with 5% DETA, respectively. The rate at which transient absorption increases is similar in all mixtures, but with decreasing induction times for solutions with increasing DETA concentrations. This result supports the hypothesis that the chemical reaction mechanisms for shocked NM and NM with DETA are the same. Data from shocked NM are compared to literature experimental and theoretical data.

Design and Construction of a Shock Tube Experiment for Multiphase Instability Experiments

NASA Astrophysics Data System (ADS)

Middlebrooks, John; Black, Wolfgang; Avgoustopoulos, Constantine; Allen, Roy; Kathakapa, Raj; Guo, Qiwen; McFarland, Jacob

2016-11-01

Hydrodynamic instabilities are important phenomena that have a wide range of practical applications in engineering and physics. One such instability, the shock driven multiphase instability (SDMI), arises when a shockwave accelerates an interface between two particle-gas mixtures with differing multiphase properties. The SDMI is present in high energy explosives, scramjets, and supernovae. A practical way of studying shock wave driven instabilities is through experimentation in a shock tube laboratory. This poster presentation will cover the design and data acquisition process of the University of Missouri's Fluid Mixing Shock Tube Laboratory. In the shock tube, a pressure generated shockwave is passed through a multiphase interface, creating the SDMI instability. This can be photographed for observation using high speed cameras, lasers, and advance imaging techniques. Important experimental parameters such as internal pressure and temperature, and mass flow rates of gases can be set and recorded by remotely controlled devices. The experimental facility provides the University of Missouri's Fluid Mixing Shock Tube Laboratory with the ability to validate simulated experiments and to conduct further inquiry into the field of shock driven multiphase hydrodynamic instabilities. Advisor.

Nulling Stabilization in the Presence of Perturbation

NASA Astrophysics Data System (ADS)

Houairi, K.; Cassaing, F.; Le Duigou, J. M.; Barillot, M.; Coudé du Foresto, V.; Hénault, F.; Jacquinod, S.; Ollivier, M.; Reess, J.-M.; Sorrente, B.

2007-07-01

Nulling interferometry is one of the most promising methods to study habitable extrasolar systems. In this context, several projects have been proposed such as ALADDIN on ground or DARWIN and PEGASE in space. A first step towards these missions will be performed with a laboratory breadboard, named PERSEE, built by a consortium including CNES, IAS, LESIA, OCA, ONERA and TAS. Its main goals are the demonstration of a polychromatic null with a 10-4 rejection rate and a 10-5 stability despite the introduction of realistic perturbations, the study of the interfaces with the formation-flying spacecrafts and the joint operation of the cophasing system with the nuller. The broadboard integration should end in 2009, then PERSEE will be open to proposals from the scientific community.

Eccentricities and inclinations of multiplanet systems with external perturbers

NASA Astrophysics Data System (ADS)

Pu, Bonan; Lai, Dong

2018-07-01

Compact multiplanet systems containing super-Earths or sub-Neptunes, commonly found around solar-type stars, may be surrounded by external giant planet or stellar companions, which can shape the architecture and observability of the inner systems. We present a comprehensive study on the evolution of the inner planetary system subject to the gravitational influence of an eccentric, misaligned outer perturber. Analytic results are derived for the inner planet eccentricities (ei) and mutual inclination (θ12) of the `two-planet + perturber' system, calibrated with numerical secular and N-body integrations, as a function of the perturber mass mp, semimajor axis ap, and inclination angle θp. We find that the dynamics of the inner system is determined by the dimensionless parameter ɛ12, given by the ratio between the differential precession rate driven by the perturber and the mutual precession rate of the inner planets. Loosely packed systems (corresponding to ɛ12 ≫ 1) are more susceptible to eccentricity/inclination excitations by the perturber than tightly packed inner systems (with ɛ12 ≪ 1) (or singletons), although resonance may occur around ɛ12 ˜ 1, leading to large ei and θ12. Dynamical instability may set in for inner planet systems with large excited eccentricities and mutual inclinations. We present a formalism to extend our analytical results to general inner systems with N > 2 planets and apply our results to constrain possible external companions to the Kepler-11 system. Eccentricity and inclination excitation by external companions may help explain the observational trend that systems with fewer transiting planets are dynamically hotter than those with more transiting planets.

Eccentricities and Inclinations of Multi-Planet Systems with External Perturbers

NASA Astrophysics Data System (ADS)

Pu, Bonan; Lai, Dong

2018-05-01

Compact multi-planet systems containing super-Earths or sub-Neptunes, commonly found around solar-type stars, may be surrounded by external giant planet or stellar companions, which can shape the architechture and observability of the inner systems. We present a comprehensive study on the evolution of the inner planetary system subject to the gravitational influence of an eccentric, misaligned outer perturber. Analytic results are derived for the inner planet eccentricities (ei) and mutual inclination (θ12) of the "2-planet + perturber" system, calibrated with numerical secular and N-body integrations, as a function of the perturber mass mp, semi-major axis ap and inclination angle θp. We find that the dynamics of the inner system is determined by the dimensionless parameter ɛ12, given by the ratio between the differential precession rate driven by the perturber and the mutual precession rate of the inner planets. Loosely packed systems (corresponding to ɛ12 ≫ 1) are more susceptible to eccentricity/inclination excitations by the perturber than tightly packed inner systems (with ɛ12 ≪ 1) (or singletons), although resonance may occur around ɛ12 ˜ 1, leading to large ei and θ12. Dynamical instability may set in for inner planet systems with large excited eccentricities and mutual inclinations. We present a formalism to extend our analytical results to general inner systems with N > 2 planets and apply our results to constrain possible external companions to the Kepler-11 system. Eccentricity and inclination excitation by external companions may help explain the observational trend that systems with fewer transiting planets are dynamically hotter than those with more transiting planets.

Revealing common disease mechanisms shared by tumors of different tissues of origin through semantic representation of genomic alterations and topic modeling.

PubMed

Chen, Vicky; Paisley, John; Lu, Xinghua

2017-03-14

Cancer is a complex disease driven by somatic genomic alterations (SGAs) that perturb signaling pathways and consequently cellular function. Identifying patterns of pathway perturbations would provide insights into common disease mechanisms shared among tumors, which is important for guiding treatment and predicting outcome. However, identifying perturbed pathways is challenging, because different tumors can have the same perturbed pathways that are perturbed by different SGAs. Here, we designed novel semantic representations that capture the functional similarity of distinct SGAs perturbing a common pathway in different tumors. Combining this representation with topic modeling would allow us to identify patterns in altered signaling pathways. We represented each gene with a vector of words describing its function, and we represented the SGAs of a tumor as a text document by pooling the words representing individual SGAs. We applied the nested hierarchical Dirichlet process (nHDP) model to a collection of tumors of 5 cancer types from TCGA. We identified topics (consisting of co-occurring words) representing the common functional themes of different SGAs. Tumors were clustered based on their topic associations, such that each cluster consists of tumors sharing common functional themes. The resulting clusters contained mixtures of cancer types, which indicates that different cancer types can share disease mechanisms. Survival analysis based on the clusters revealed significant differences in survival among the tumors of the same cancer type that were assigned to different clusters. The results indicate that applying topic modeling to semantic representations of tumors identifies patterns in the combinations of altered functional pathways in cancer.

Computerized procedures system

DOEpatents

Lipner, Melvin H.; Mundy, Roger A.; Franusich, Michael D.

2010-10-12

An online data driven computerized procedures system that guides an operator through a complex process facility's operating procedures. The system monitors plant data, processes the data and then, based upon this processing, presents the status of the current procedure step and/or substep to the operator. The system supports multiple users and a single procedure definition supports several interface formats that can be tailored to the individual user. Layered security controls access privileges and revisions are version controlled. The procedures run on a server that is platform independent of the user workstations that the server interfaces with and the user interface supports diverse procedural views.

Semantic integration of information about orthologs and diseases: the OGO system.

PubMed

Miñarro-Gimenez, Jose Antonio; Egaña Aranguren, Mikel; Martínez Béjar, Rodrigo; Fernández-Breis, Jesualdo Tomás; Madrid, Marisa

2011-12-01

Semantic Web technologies like RDF and OWL are currently applied in life sciences to improve knowledge management by integrating disparate information. Many of the systems that perform such task, however, only offer a SPARQL query interface, which is difficult to use for life scientists. We present the OGO system, which consists of a knowledge base that integrates information of orthologous sequences and genetic diseases, providing an easy to use ontology-constrain driven query interface. Such interface allows the users to define SPARQL queries through a graphical process, therefore not requiring SPARQL expertise. Copyright © 2011 Elsevier Inc. All rights reserved.

Automation Hooks Architecture for Flexible Test Orchestration - Concept Development and Validation

NASA Technical Reports Server (NTRS)

Lansdowne, C. A.; Maclean, John R.; Winton, Chris; McCartney, Pat

2011-01-01

The Automation Hooks Architecture Trade Study for Flexible Test Orchestration sought a standardized data-driven alternative to conventional automated test programming interfaces. The study recommended composing the interface using multicast DNS (mDNS/SD) service discovery, Representational State Transfer (Restful) Web Services, and Automatic Test Markup Language (ATML). We describe additional efforts to rapidly mature the Automation Hooks Architecture candidate interface definition by validating it in a broad spectrum of applications. These activities have allowed us to further refine our concepts and provide observations directed toward objectives of economy, scalability, versatility, performance, severability, maintainability, scriptability and others.

The Brain Is Faster than the Hand in Split-Second Intentions to Respond to an Impending Hazard: A Simulation of Neuroadaptive Automation to Speed Recovery to Perturbation in Flight Attitude.

PubMed

Callan, Daniel E; Terzibas, Cengiz; Cassel, Daniel B; Sato, Masa-Aki; Parasuraman, Raja

2016-01-01

The goal of this research is to test the potential for neuroadaptive automation to improve response speed to a hazardous event by using a brain-computer interface (BCI) to decode perceptual-motor intention. Seven participants underwent four experimental sessions while measuring brain activity with magnetoencephalograpy. The first three sessions were of a simple constrained task in which the participant was to pull back on the control stick to recover from a perturbation in attitude in one condition and to passively observe the perturbation in the other condition. The fourth session consisted of having to recover from a perturbation in attitude while piloting the plane through the Grand Canyon constantly maneuvering to track over the river below. Independent component analysis was used on the first two sessions to extract artifacts and find an event related component associated with the onset of the perturbation. These two sessions were used to train a decoder to classify trials in which the participant recovered from the perturbation (motor intention) vs. just passively viewing the perturbation. The BCI-decoder was tested on the third session of the same simple task and found to be able to significantly distinguish motor intention trials from passive viewing trials (mean = 69.8%). The same BCI-decoder was then used to test the fourth session on the complex task. The BCI-decoder significantly classified perturbation from no perturbation trials (73.3%) with a significant time savings of 72.3 ms (Original response time of 425.0-352.7 ms for BCI-decoder). The BCI-decoder model of the best subject was shown to generalize for both performance and time savings to the other subjects. The results of our off-line open loop simulation demonstrate that BCI based neuroadaptive automation has the potential to decode motor intention faster than manual control in response to a hazardous perturbation in flight attitude while ignoring ongoing motor and visual induced activity related to piloting the airplane.

The Brain Is Faster than the Hand in Split-Second Intentions to Respond to an Impending Hazard: A Simulation of Neuroadaptive Automation to Speed Recovery to Perturbation in Flight Attitude

PubMed Central

Callan, Daniel E.; Terzibas, Cengiz; Cassel, Daniel B.; Sato, Masa-aki; Parasuraman, Raja

2016-01-01

The goal of this research is to test the potential for neuroadaptive automation to improve response speed to a hazardous event by using a brain-computer interface (BCI) to decode perceptual-motor intention. Seven participants underwent four experimental sessions while measuring brain activity with magnetoencephalograpy. The first three sessions were of a simple constrained task in which the participant was to pull back on the control stick to recover from a perturbation in attitude in one condition and to passively observe the perturbation in the other condition. The fourth session consisted of having to recover from a perturbation in attitude while piloting the plane through the Grand Canyon constantly maneuvering to track over the river below. Independent component analysis was used on the first two sessions to extract artifacts and find an event related component associated with the onset of the perturbation. These two sessions were used to train a decoder to classify trials in which the participant recovered from the perturbation (motor intention) vs. just passively viewing the perturbation. The BCI-decoder was tested on the third session of the same simple task and found to be able to significantly distinguish motor intention trials from passive viewing trials (mean = 69.8%). The same BCI-decoder was then used to test the fourth session on the complex task. The BCI-decoder significantly classified perturbation from no perturbation trials (73.3%) with a significant time savings of 72.3 ms (Original response time of 425.0–352.7 ms for BCI-decoder). The BCI-decoder model of the best subject was shown to generalize for both performance and time savings to the other subjects. The results of our off-line open loop simulation demonstrate that BCI based neuroadaptive automation has the potential to decode motor intention faster than manual control in response to a hazardous perturbation in flight attitude while ignoring ongoing motor and visual induced activity related to piloting the airplane. PMID:27199710

Hydrodynamic instability growth of three-dimensional modulations in radiation-driven implosions with “low-foot” and “high-foot” drives at the National Ignition Facility

DOE Office of Scientific and Technical Information (OSTI.GOV)

Smalyuk, V. A.; Weber, C. R.; Robey, H. F.

Hydrodynamic instability growth has been studied using three-dimensional (3-D) broadband modulations by comparing “high-foot” and “low-foot” spherical plastic (CH) capsule implosions at the National Ignition Facility (NIF). The initial perturbations included capsule outer-surface roughness and capsule-mounting membranes (“tents”) that were similar to those used in a majority of implosions on NIF. The tents with thicknesses of 31-nm, 46-nm, and 109-nm were used in the experiments. The outer-surface roughness in the “low-foot” experiment was similar to the standard specification, while it was increased by ~4 times in the “high-foot” experiment to compensate for the reduced growth. The ablation-front instability growth wasmore » measured using a Hydrodynamic Growth Radiography platform at a convergence ratio of 3. The dominant capsule perturbations, generated by the tent mountings, had measured perturbation amplitudes comparable to the capsule thickness with the “low-foot” drive. These tent perturbations were reduced by ~3 to 10 times in implosions with the “high-foot” drive. Unexpectedly, the measured perturbations with initially thinner tents were either larger or similar to the measured perturbations with thicker tents for both “high-foot” and “low-foot” drives. While the measured instability growth of 3-D broadband perturbations was also significantly reduced by ~5 to 10 times with the “high-foot” drive, compared to the “low-foot” drive, the growth mitigation was stronger than expected based on previous “growth-factor” results measured with two-dimensional modulations. Lastly, one of the hypotheses to explain the results is based on the 3-D modulations of the oxygen content in the bulk of the capsule having a stronger effect on the overall growth of capsule perturbations than the outer-surface capsule roughness.« less

Hydrodynamic instability growth of three-dimensional modulations in radiation-driven implosions with “low-foot” and “high-foot” drives at the National Ignition Facility

DOE PAGES

Smalyuk, V. A.; Weber, C. R.; Robey, H. F.; ...

2017-04-11

Hydrodynamic instability growth has been studied using three-dimensional (3-D) broadband modulations by comparing “high-foot” and “low-foot” spherical plastic (CH) capsule implosions at the National Ignition Facility (NIF). The initial perturbations included capsule outer-surface roughness and capsule-mounting membranes (“tents”) that were similar to those used in a majority of implosions on NIF. The tents with thicknesses of 31-nm, 46-nm, and 109-nm were used in the experiments. The outer-surface roughness in the “low-foot” experiment was similar to the standard specification, while it was increased by ~4 times in the “high-foot” experiment to compensate for the reduced growth. The ablation-front instability growth wasmore » measured using a Hydrodynamic Growth Radiography platform at a convergence ratio of 3. The dominant capsule perturbations, generated by the tent mountings, had measured perturbation amplitudes comparable to the capsule thickness with the “low-foot” drive. These tent perturbations were reduced by ~3 to 10 times in implosions with the “high-foot” drive. Unexpectedly, the measured perturbations with initially thinner tents were either larger or similar to the measured perturbations with thicker tents for both “high-foot” and “low-foot” drives. While the measured instability growth of 3-D broadband perturbations was also significantly reduced by ~5 to 10 times with the “high-foot” drive, compared to the “low-foot” drive, the growth mitigation was stronger than expected based on previous “growth-factor” results measured with two-dimensional modulations. Lastly, one of the hypotheses to explain the results is based on the 3-D modulations of the oxygen content in the bulk of the capsule having a stronger effect on the overall growth of capsule perturbations than the outer-surface capsule roughness.« less

Volcano seismicity and ground deformation unveil the gravity-driven magma discharge dynamics of a volcanic eruption.

PubMed

Ripepe, Maurizio; Donne, Dario Delle; Genco, Riccardo; Maggio, Giuseppe; Pistolesi, Marco; Marchetti, Emanuele; Lacanna, Giorgio; Ulivieri, Giacomo; Poggi, Pasquale

2015-05-18

Effusive eruptions are explained as the mechanism by which volcanoes restore the equilibrium perturbed by magma rising in a chamber deep in the crust. Seismic, ground deformation and topographic measurements are compared with effusion rate during the 2007 Stromboli eruption, drawing an eruptive scenario that shifts our attention from the interior of the crust to the surface. The eruption is modelled as a gravity-driven drainage of magma stored in the volcanic edifice with a minor contribution of magma supplied at a steady rate from a deep reservoir. Here we show that the discharge rate can be predicted by the contraction of the volcano edifice and that the very-long-period seismicity migrates downwards, tracking the residual volume of magma in the shallow reservoir. Gravity-driven magma discharge dynamics explain the initially high discharge rates observed during eruptive crises and greatly influence our ability to predict the evolution of effusive eruptions.

Quantum correlations from a room-temperature optomechanical cavity.

PubMed

Purdy, T P; Grutter, K E; Srinivasan, K; Taylor, J M

2017-06-23

The act of position measurement alters the motion of an object being measured. This quantum measurement backaction is typically much smaller than the thermal motion of a room-temperature object and thus difficult to observe. By shining laser light through a nanomechanical beam, we measure the beam's thermally driven vibrations and perturb its motion with optical force fluctuations at a level dictated by the Heisenberg measurement-disturbance uncertainty relation. We demonstrate a cross-correlation technique to distinguish optically driven motion from thermally driven motion, observing this quantum backaction signature up to room temperature. We use the scale of the quantum correlations, which is determined by fundamental constants, to gauge the size of thermal motion, demonstrating a path toward absolute thermometry with quantum mechanically calibrated ticks. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

In-situ Condition Monitoring of Components in Small Modular Reactors Using Process and Electrical Signature Analysis. Final report, volume 1. Development of experimental flow control loop, data analysis and plant monitoring

DOE Office of Scientific and Technical Information (OSTI.GOV)

Upadhyaya, Belle; Hines, J. Wesley; Damiano, Brian

The research and development under this project was focused on the following three major objectives: Objective 1: Identification of critical in-vessel SMR components for remote monitoring and development of their low-order dynamic models, along with a simulation model of an integral pressurized water reactor (iPWR). Objective 2: Development of an experimental flow control loop with motor-driven valves and pumps, incorporating data acquisition and on-line monitoring interface. Objective 3: Development of stationary and transient signal processing methods for electrical signatures, machinery vibration, and for characterizing process variables for equipment monitoring. This objective includes the development of a data analysis toolbox. Themore » following is a summary of the technical accomplishments under this project: - A detailed literature review of various SMR types and electrical signature analysis of motor-driven systems was completed. A bibliography of literature is provided at the end of this report. Assistance was provided by ORNL in identifying some key references. - A review of literature on pump-motor modeling and digital signal processing methods was performed. - An existing flow control loop was upgraded with new instrumentation, data acquisition hardware and software. The upgrading of the experimental loop included the installation of a new submersible pump driven by a three-phase induction motor. All the sensors were calibrated before full-scale experimental runs were performed. - MATLAB-Simulink model of a three-phase induction motor and pump system was completed. The model was used to simulate normal operation and fault conditions in the motor-pump system, and to identify changes in the electrical signatures. - A simulation model of an integral PWR (iPWR) was updated and the MATLAB-Simulink model was validated for known transients. The pump-motor model was interfaced with the iPWR model for testing the impact of primary flow perturbations (upsets) on plant parameters and the pump electrical signatures. Additionally, the reactor simulation is being used to generate normal operation data and data with instrumentation faults and process anomalies. A frequency controller was interfaced with the motor power supply in order to vary the electrical supply frequency. The experimental flow control loop was used to generate operational data under varying motor performance characteristics. Coolant leakage events were simulated by varying the bypass loop flow rate. The accuracy of motor power calculation was improved by incorporating the power factor, computed from motor current and voltage in each phase of the induction motor.- A variety of experimental runs were made for steady-state and transient pump operating conditions. Process, vibration, and electrical signatures were measured using a submersible pump with variable supply frequency. High correlation was seen between motor current and pump discharge pressure signal; similar high correlation was exhibited between pump motor power and flow rate. Wide-band analysis indicated high coherence (in the frequency domain) between motor current and vibration signals. - Wide-band operational data from a PWR were acquired from AMS Corporation and used to develop time-series models, and to estimate signal spectrum and sensor time constant. All the data were from different pressure transmitters in the system, including primary and secondary loops. These signals were pre-processed using the wavelet transform for filtering both low-frequency and high-frequency bands. This technique of signal pre-processing provides minimum distortion of the data, and results in a more optimal estimation of time constants of plant sensors using time-series modeling techniques.« less

The cooling of confined ions driven by laser beams

DOE Office of Scientific and Technical Information (OSTI.GOV)

Reyna, L.G.; Sobehart, J.R.

1993-07-01

We finalize the dynamics of confined ions driven by a quantized radiation field. The ions can absorb photons from an incident laser beam and relax back to the ground state by either induced emissions or spontaneous emissions. Here we assume that the absorption of photons is immediately followed by spontaneous emissions, resulting in single-level ions perturbed by the exchange of momentum with the radiation field. The probability distribution of the ions is calculated using singular expansions in the low noise asymptotic limit. The present calculations reproduce the quantum results in the limit of heavy particles in static traps, and themore » classical results of ions in radio-frequency confining wells.« less

Generic analysis of kinetically driven inflation

NASA Astrophysics Data System (ADS)

Saitou, Rio

2018-04-01

We perform a model-independent analysis of kinetically driven inflation (KDI) which (partially) includes generalized G-inflation and ghost inflation. We evaluate the background evolution splitting into the inflationary attractor and the perturbation around it. We also consider the quantum fluctuation of the scalar mode with a usual scaling and derive the spectral index, ignoring the contribution from the second-order products of slow-roll parameters. Using these formalisms, we find that within our generic framework the models of KDI which possess the shift symmetry of scalar field cannot create the quantum fluctuation consistent with the observation. Breaking the shift symmetry, we obtain a few essential conditions for viable models of KDI associated with the graceful exit.

Growth rates of the buoyancy-driven instability of an autocatalytic reaction front in a narrow cell

PubMed

Bockmann; Muller

2000-09-18

Experimental studies were performed on the buoyancy-driven instability of an autocatalytic reaction front in a quasi-2D cell. The unstable density stratification at an ascending front leads to convection that results in a fingerlike front deformation. The growth rates of the spatial modes of the instability are determined at the initial stage. A stabilization is found at higher wave numbers, while the system is unstable against low wave number perturbations. Whereas comparison with a reported model governed by Hele-Shaw flow fails, a two-dimensional Navier-Stokes model yields more satisfactory results. Still, present deviations suggest the presence of an additional mechanism that suppresses the growth.

Hydrodynamic-Driven Stability Analysis of Morphological Patterns on Stalactites and Implications for Cave Paleoflow Reconstructions

NASA Astrophysics Data System (ADS)

Camporeale, Carlo; Ridolfi, Luca

2012-06-01

A novel hydrodynamic-driven stability analysis is presented for surface patterns on speleothems, i.e., secondary sedimentary cave deposits, by coupling fluid dynamics to the geochemistry of calcite precipitation or dissolution. Falling film theory provides the solution for the flow-field and depth perturbations, the latter being crucial to triggering patterns known as crenulations. In a wide range of Reynolds numbers, the model provides the dominant wavelengths and pattern celerities, in fair agreement with field data. The analysis of the phase velocity of ridges on speleothems has a potential as a proxy of past film flow rates, thus suggesting a new support for paleoclimate analyses.

Natural convection in melt crystal growth - The influence of flow pattern on solute segregation

NASA Technical Reports Server (NTRS)

Brown, R. A.; Yamaguchi, Y.; Chang, C. J.

1982-01-01

The results of two lines of research aimed at calculating the structure of the flows driven by buoyancy in small-scale crystal growth systems and at understanding the coupling between these flows, the shape of the solidification interface, and dopant segregation in the crystal are reviewed. First, finite-element methods are combined with computer-aided methods for detecting multiple steady solutions to analyze the structure of the buoyancy-driven axisymmetric flows in a vertical cylinder heated from below. This system exhibits onset of convection, multiple steady flows, and loss of the primary stable flow beyond a critical value of the Rayleigh number. Second, results are presented for calculations of convection, melt/solid interface shape, and dopant segregation within a vertical ampoule with thermal boundary conditions that represent a prototype of the vertical Bridgman growth system.

Domain decomposition algorithms and computation fluid dynamics

NASA Technical Reports Server (NTRS)

Chan, Tony F.

1988-01-01

In the past several years, domain decomposition was a very popular topic, partly motivated by the potential of parallelization. While a large body of theory and algorithms were developed for model elliptic problems, they are only recently starting to be tested on realistic applications. The application of some of these methods to two model problems in computational fluid dynamics are investigated. Some examples are two dimensional convection-diffusion problems and the incompressible driven cavity flow problem. The construction and analysis of efficient preconditioners for the interface operator to be used in the iterative solution of the interface solution is described. For the convection-diffusion problems, the effect of the convection term and its discretization on the performance of some of the preconditioners is discussed. For the driven cavity problem, the effectiveness of a class of boundary probe preconditioners is discussed.

Surface Plasmon-Mediated Nanoscale Localization of Laser-Driven sub-Terahertz Spin Dynamics in Magnetic Dielectrics.

PubMed

Chekhov, Alexander L; Stognij, Alexander I; Satoh, Takuya; Murzina, Tatiana V; Razdolski, Ilya; Stupakiewicz, Andrzej

2018-05-09

We report spatial localization of the effective magnetic field generated via the inverse Faraday effect employing surface plasmon polaritons (SPPs) at Au/garnet interface. Analyzing both numerically and analytically the electric field of the SPPs at this interface, we corroborate our study with a proof-of-concept experiment showing efficient SPP-driven excitation of coherent spin precession with 0.41 THz frequency. We argue that the subdiffractional confinement of the SPP electric field enables strong spatial localization of the SPP-mediated excitation of spin dynamics. We demonstrate two orders of magnitude enhancement of the excitation efficiency at the surface plasmon resonance within a 100 nm layer of a dielectric garnet. Our findings broaden the horizons of ultrafast spin-plasmonics and open pathways toward nonthermal opto-magnetic recording on the nanoscale.

New Finite Difference Methods Based on IIM for Inextensible Interfaces in Incompressible Flows

PubMed Central

Li, Zhilin; Lai, Ming-Chih

2012-01-01

In this paper, new finite difference methods based on the augmented immersed interface method (IIM) are proposed for simulating an inextensible moving interface in an incompressible two-dimensional flow. The mathematical models arise from studying the deformation of red blood cells in mathematical biology. The governing equations are incompressible Stokes or Navier-Stokes equations with an unknown surface tension, which should be determined in such a way that the surface divergence of the velocity is zero along the interface. Thus, the area enclosed by the interface and the total length of the interface should be conserved during the evolution process. Because of the nonlinear and coupling nature of the problem, direct discretization by applying the immersed boundary or immersed interface method yields complex nonlinear systems to be solved. In our new methods, we treat the unknown surface tension as an augmented variable so that the augmented IIM can be applied. Since finding the unknown surface tension is essentially an inverse problem that is sensitive to perturbations, our regularization strategy is to introduce a controlled tangential force along the interface, which leads to a least squares problem. For Stokes equations, the forward solver at one time level involves solving three Poisson equations with an interface. For Navier-Stokes equations, we propose a modified projection method that can enforce the pressure jump condition corresponding directly to the unknown surface tension. Several numerical experiments show good agreement with other results in the literature and reveal some interesting phenomena. PMID:23795308

Human Apolipoprotein A1 at Solid/Liquid and Liquid/Gas Interfaces.

PubMed

Dogan, Susanne; Paulus, Michael; Forov, Yury; Weis, Christopher; Kampmann, Matthias; Cewe, Christopher; Kiesel, Irena; Degen, Patrick; Salmen, Paul; Rehage, Heinz; Tolan, Metin

2018-04-12

An X-ray reflectivity study on the adsorption behavior of human apolipoprotein A1 (apoA1) at hydrophilic and hydrophobic interfaces is presented. It is shown that the protein interacts via electrostatic and hydrophobic interactions with the interfaces, resulting in the absorption of the protein. pH dependent measurements at the solid/liquid interface between silicon dioxide and aqueous protein solution show that in a small pH range between pH 4 and 6, adsorption is increased due to electrostatic attraction. Here, the native shape of the protein seems to be conserved. In contrast, the adsorption at the liquid/gas interface is mainly driven by hydrophobic effects, presumably by extending the hydrophobic regions of the amphipathic helices, and results in a conformational change of the protein during adsorption. However, the addition of differently charged membrane-forming lipids at the liquid/gas interface illustrates the ability of apoA1 to include lipids, resulting in a depletion of the lipids from the interface.

Dynamics of a thermally driven film climbing the outside of a vertical cylinder

NASA Astrophysics Data System (ADS)

Smolka, Linda B.

2017-10-01

The dynamics of a film climbing the outside of a vertical cylinder under the competing effects of a thermally driven surface tension gradient and gravity is examined through numerical simulations of a thin-film model for the film height. The model, including boundary conditions, depends on three parameters, the scaled cylinder radius R ̂, the upstream film height h∞, and the downstream precursor film thickness b , and reduces to the model for Marangoni driven film climbing a vertical plate in the limit R ̂→∞ . The axisymmetric advancing front displays dynamics similar to that found along a vertical plate where, depending on h∞, the film forms a single Lax shock, an undercompressive double shock, or a rarefaction-undercompressive shock. A linear stability analysis of the Lax shock reveals the number of fingers that form along the contact line increases linearly with cylinder circumference while no fingers form for sufficiently small cylinders (below R ̂≈1.15 when b =0.1 ). The substrate curvature controls the height of the Lax shock, bounds on h∞ that define the three distinct solutions, and the maximum growth rate of contact line perturbations to the Lax shock when R ̂=O (1 ) , whereas the three solutions and the stability of the Lax shock converge to the behavior one observes on a vertical plate when R ̂≥O (10 ) . An energy analysis reveals that the azimuthal curvatures of the base state and perturbation, which arise from the annular geometry of the film, promote instability of the advancing contact line.

Brillouin-Wigner theory for high-frequency expansion in periodically driven systems: Application to Floquet topological insulators

NASA Astrophysics Data System (ADS)

Mikami, Takahiro; Kitamura, Sota; Yasuda, Kenji; Tsuji, Naoto; Oka, Takashi; Aoki, Hideo

2016-04-01

We construct a systematic high-frequency expansion for periodically driven quantum systems based on the Brillouin-Wigner (BW) perturbation theory, which generates an effective Hamiltonian on the projected zero-photon subspace in the Floquet theory, reproducing the quasienergies and eigenstates of the original Floquet Hamiltonian up to desired order in 1 /ω , with ω being the frequency of the drive. The advantage of the BW method is that it is not only efficient in deriving higher-order terms, but even enables us to write down the whole infinite series expansion, as compared to the van Vleck degenerate perturbation theory. The expansion is also free from a spurious dependence on the driving phase, which has been an obstacle in the Floquet-Magnus expansion. We apply the BW expansion to various models of noninteracting electrons driven by circularly polarized light. As the amplitude of the light is increased, the system undergoes a series of Floquet topological-to-topological phase transitions, whose phase boundary in the high-frequency regime is well explained by the BW expansion. As the frequency is lowered, the high-frequency expansion breaks down at some point due to band touching with nonzero-photon sectors, where we find numerically even more intricate and richer Floquet topological phases spring out. We have then analyzed, with the Floquet dynamical mean-field theory, the effects of electron-electron interaction and energy dissipation. We have specifically revealed that phase transitions from Floquet-topological to Mott insulators emerge, where the phase boundaries can again be captured with the high-frequency expansion.

Observation, Identification, and Impact of Multi-Modal Plasma Responses to Applied Magnetic Perturbations

NASA Astrophysics Data System (ADS)

Logan, Nikolas

2015-11-01

Experiments on DIII-D have demonstrated that multiple kink modes with comparable amplitudes can be driven by applied nonaxisymmetric fields with toroidal mode number n=2, in good agreement with ideal MHD models. In contrast to a single-mode model, the structure of the response measured using poloidally distributed magnetic sensors changes when varying the applied poloidal spectrum. This is most readily evident in that different spectra of applied fields can independently excite inboard and outboard magnetic responses, which are identified as distinct plasma modes by IPEC modeling. The outboard magnetic response is correlated with the plasma pressure and consistent with the long wavelength perturbations of the least stable, pressure driven kinks calculated by DCON and used in IPEC. The models show the structure of the pressure driven modes extends throughout the bad curvature region and into the plasma core. The inboard plasma response is correlated with the edge current profile and requires the inclusion of multiple kink modes with greater stability, including opposite helicity modes, to replicate the experimental observations in the models. IPEC reveals the resulting mode structure to be highly localized in the plasma edge. Scans of the applied spectrum show this response induces the transport that influences the density pump-out, as well as the toroidal rotation drag observed in experiment and modeled using PENT. The classification of these two mode types establishes a new multi-modal paradigm for n=2 plasma response and guides the understanding needed to optimize 3D fields for independent control of stability and transport. Supported by US DOE contract DE-AC02-09CH11466.

Dynamics of a thermally driven film climbing the outside of a vertical cylinder.

PubMed

Smolka, Linda B

2017-10-01

The dynamics of a film climbing the outside of a vertical cylinder under the competing effects of a thermally driven surface tension gradient and gravity is examined through numerical simulations of a thin-film model for the film height. The model, including boundary conditions, depends on three parameters, the scaled cylinder radius R[over ̂], the upstream film height h_{∞}, and the downstream precursor film thickness b, and reduces to the model for Marangoni driven film climbing a vertical plate in the limit R[over ̂]→∞. The axisymmetric advancing front displays dynamics similar to that found along a vertical plate where, depending on h_{∞}, the film forms a single Lax shock, an undercompressive double shock, or a rarefaction-undercompressive shock. A linear stability analysis of the Lax shock reveals the number of fingers that form along the contact line increases linearly with cylinder circumference while no fingers form for sufficiently small cylinders (below R[over ̂]≈1.15 when b=0.1). The substrate curvature controls the height of the Lax shock, bounds on h_{∞} that define the three distinct solutions, and the maximum growth rate of contact line perturbations to the Lax shock when R[over ̂]=O(1), whereas the three solutions and the stability of the Lax shock converge to the behavior one observes on a vertical plate when R[over ̂]≥O(10). An energy analysis reveals that the azimuthal curvatures of the base state and perturbation, which arise from the annular geometry of the film, promote instability of the advancing contact line.

Experimental Control of Thermocapillary Convection in a Liquid Bridge

NASA Technical Reports Server (NTRS)

Petrov, Valery; Schatz, Michael F.; Muehlner, Kurt A.; VanHook, Stephen J.; McCormick, W. D.; Swift, Jack B.; Swinney, Harry L.

1996-01-01

We demonstrate the stabilization of an isolated unstable periodic orbit in a liquid bridge convection experiment. A model independent, nonlinear control algorithm uses temperature measurements near the liquid interface to compute control perturbations which are applied by a thermoelectric element. The algorithm employs a time series reconstruction of a nonlinear control surface in a high dimensional phase space to alter the system dynamics.

Domain Derivatives in Dielectric Rough Surface Scattering

DTIC Science & Technology

2015-01-01

and require the gradient of the objective function in the unknown model parameter vector at each stage of iteration. For large N, finite...differencing becomes numerically intensive, and an efficient alternative is domain differentiation in which the full gradient is obtained by solving a single...derivative calculation of the gradient for a locally perturbed dielectric interface. The method is non-variational, and algebraic in nature in that it

Self-organized pattern formation at organic-inorganic interfaces during deposition: Experiment versus modeling

NASA Astrophysics Data System (ADS)

Szillat, F.; Mayr, S. G.

2011-09-01

Self-organized pattern formation during physical vapor deposition of organic materials onto rough inorganic substrates is characterized by a complex morphological evolution as a function of film thickness. We employ a combined experimental-theoretical study using atomic force microscopy and numerically solved continuum rate equations to address morphological evolution in the model system: poly(bisphenol A carbonate) on polycrystalline Cu. As the key ingredients for pattern formation, (i) curvature and interface potential driven surface diffusion, (ii) deposition noise, and (iii) interface boundary effects are identified. Good agreement of experiments and theory, fitting only the Hamaker constant and diffusivity within narrow physical parameter windows, corroborates the underlying physics and paves the way for computer-assisted interface engineering.

Generalized elastica patterns in a curved rotating Hele-Shaw cell

NASA Astrophysics Data System (ADS)

Brandão, Rodolfo; Miranda, José A.

2017-08-01

We study a family of generalized elasticalike equilibrium shapes that arise at the interface separating two fluids in a curved rotating Hele-Shaw cell. This family of stationary interface solutions consists of shapes that balance the competing capillary and centrifugal forces in such a curved flow environment. We investigate how the emerging interfacial patterns are impacted by changes in the geometric properties of the curved Hele-Shaw cell. A vortex-sheet formalism is used to calculate the two-fluid interface curvature, and a gallery of possible shapes is provided to highlight a number of peculiar morphological features. A linear perturbation theory is employed to show that the most prominent aspects of these complex stationary patterns can be fairly well reproduced by the interplay of just two interfacial modes. The connection of these dominant modes to the geometry of the curved cell, as well as to the fluid dynamic properties of the flow, is discussed.

Computational Study of the Richtmyer-Meshkov Instability with a Complex Initial Condition

NASA Astrophysics Data System (ADS)

McFarland, Jacob; Reilly, David; Greenough, Jeffrey; Ranjan, Devesh

2014-11-01

Results are presented for a computational study of the Richtmyer-Meshkov instability with a complex initial condition. This study covers experiments which will be conducted at the newly-built inclined shock tube facility at the Georgia Institute of Technology. The complex initial condition employed consists of an underlying inclined interface perturbation with a broadband spectrum of modes superimposed. A three-dimensional staggered mesh arbitrary Lagrange Eulerian (ALE) hydrodynamics code developed at Lawerence Livermore National Laboratory called ARES was used to obtain both qualitative and quantitative results. Qualitative results are discussed using time series of density plots from which mixing width may be extracted. Quantitative results are also discussed using vorticity fields, circulation components, and energy spectra. The inclined interface case is compared to the complex interface case in order to study the effect of initial conditions on shocked, variable-density flows.

Stability of the electroosmotic flow of a two-layer electrolyte-dielectric system with external pressure gradient⋆.

PubMed

Gorbacheva, E V; Ganchenko, G S; Demekhin, E A

2018-03-27

The stability of the electroosmotic flow of electrolyte-dielectric viscous liquids under the influence of the DC and AC electric fields along with the external pressure gradient is studied theoretically. Liquids are bounded by two infinite parallel plates. The lower wall bordering the electrolyte is assumed to be a charged surface, and the upper wall is electrically isolated. The charge at the lower boundary is assumed to be immobile, while the surface charge at the free surface is assumed to be mobile. In this paper, we study the micro- and nanosized liquid layers. The mathematical model is described by a nonlinear system of the Nernst-Planck-Poisson-Stokes partial differential equations with the appropriate boundary conditions on the solid surface, the electrolyte/dielectric interface, and on the upper wall. The pressure gradient is highly important for the stability of the flow. For the DC case, the external pressure could either stabilize and destabilize the flow depending on the relative directions of the electroosmotic flow and the pressure-driven flow. For the AC case, the dependence on the value of the external pressure is not monotonous for different wave numbers of perturbations, but, as a rule, the external pressure destabilizes the flow. As the frequency of the electric field increases, the one-dimensional solution of the problem becomes stable.

Stability analysis applied to the early stages of viscous drop breakup by a high-speed gas stream

NASA Astrophysics Data System (ADS)

Padrino, Juan C.; Longmire, Ellen K.

2013-11-01

The instability of a liquid drop suddenly exposed to a high-speed gas stream behind a shock wave is studied by considering the gas-liquid motion at the drop interface. The discontinuous velocity profile given by the uniform, parallel flow of an inviscid, compressible gas over a viscous liquid is considered, and drop acceleration is included. Our analysis considers compressibility effects not only in the base flow, but also in the equations of motion for the perturbations. Recently published high-resolution images of the process of drop breakup by a passing shock have provided experimental evidence supporting the idea that a critical gas dynamic pressure can be found above which drop piercing by the growth of acceleration-driven instabilities gives way to drop breakup by liquid entrainment resulting from the gas shearing action. For a set of experimental runs from the literature, results show that, for shock Mach numbers >= 2, a band of rapidly growing waves forms in the region well upstream of the drop's equator at the location where the base flow passes from subsonic to supersonic, in agreement with experimental images. Also, the maximum growth rate can be used to predict the transition of the breakup mode from Rayleigh-Taylor piercing to shear-induced entrainment. The authors acknowledge support of the NSF (DMS-0908561).

The complex fluid dynamics of simple diffusion

NASA Astrophysics Data System (ADS)

Vold, Erik

2017-11-01

Diffusion as the mass transport process responsible for mixing fluids at the atomic level is often underestimated in its complexity. An initial discontinuity between two species of different atomic masses exhibits a mass density discontinuity under isothermal pressure equilibrium implying equal species molar densities. The self-consistent kinetic transport processes across such an interface leads to a zero sum of mass flux relative to the center of mass and so diffusion alone cannot relax an initially stationary mass discontinuity nor broaden the density profile at the interface. The diffusive mixing leads to a molar imbalance which drives a center of mass velocity which moves the heavier species toward the lighter species leading to the interfacial density relaxation. Simultaneously, the species non-zero molar flux modifies the pressure profile in a transient wave and in a local perturbation. The resulting center of mass velocity has two components; one, associated with the divergence of the flow, persists in the diffusive mixing region throughout the diffusive mixing process, and two, travelling waves at the front of the pressure perturbations propagate away from the mixing region. The momentum in these waves is necessary to maintain momentum conservation in the center of mass frame. Thus, in a number of ways, the diffusive mixing provides feedback into the small scale advective motions. Numerical methods which diffuse all species assuming P-T equilibrium may not recover the subtle dynamics of mass transport at an interface. Work performed by the LANS, LLC, under USDOE Contract No. DE-AC52-06NA25396, funded by the (ASC) Program.

Structural learning in feedforward and feedback control.

PubMed

Yousif, Nada; Diedrichsen, Jörn

2012-11-01

For smooth and efficient motor control, the brain needs to make fast corrections during the movement to resist possible perturbations. It also needs to adapt subsequent movements to improve future performance. It is important that both feedback corrections and feedforward adaptation need to be made based on noisy and often ambiguous sensory data. Therefore, the initial response of the motor system, both for online corrections and adaptive responses, is guided by prior assumptions about the likely structure of perturbations. In the context of correcting and adapting movements perturbed by a force field, we asked whether these priors are hard wired or whether they can be modified through repeated exposure to differently shaped force fields. We found that both feedback corrections to unexpected perturbations and feedforward adaptation to a new force field changed, such that they were appropriate to counteract the type of force field that participants had experienced previously. We then investigated whether these changes were driven by a common mechanism or by two separate mechanisms. Participants experienced force fields that were either temporally consistent, causing sustained adaptation, or temporally inconsistent, causing little overall adaptation. We found that the consistent force fields modified both feedback and feedforward responses. In contrast, the inconsistent force field modified the temporal shape of feedback corrections but not of the feedforward adaptive response. These results indicate that responses to force perturbations can be modified in a structural manner and that these modifications are at least partly dissociable for feedback and feedforward control.

Structural learning in feedforward and feedback control

PubMed Central

Diedrichsen, Jörn

2012-01-01

For smooth and efficient motor control, the brain needs to make fast corrections during the movement to resist possible perturbations. It also needs to adapt subsequent movements to improve future performance. It is important that both feedback corrections and feedforward adaptation need to be made based on noisy and often ambiguous sensory data. Therefore, the initial response of the motor system, both for online corrections and adaptive responses, is guided by prior assumptions about the likely structure of perturbations. In the context of correcting and adapting movements perturbed by a force field, we asked whether these priors are hard wired or whether they can be modified through repeated exposure to differently shaped force fields. We found that both feedback corrections to unexpected perturbations and feedforward adaptation to a new force field changed, such that they were appropriate to counteract the type of force field that participants had experienced previously. We then investigated whether these changes were driven by a common mechanism or by two separate mechanisms. Participants experienced force fields that were either temporally consistent, causing sustained adaptation, or temporally inconsistent, causing little overall adaptation. We found that the consistent force fields modified both feedback and feedforward responses. In contrast, the inconsistent force field modified the temporal shape of feedback corrections but not of the feedforward adaptive response. These results indicate that responses to force perturbations can be modified in a structural manner and that these modifications are at least partly dissociable for feedback and feedforward control. PMID:22896725

Dynamic behavior of the interface of striplike structures in driven lattice gases

NASA Astrophysics Data System (ADS)

Saracco, Gustavo P.; Albano, Ezequiel V.

2008-09-01

In this work, the dynamic behavior of the interfaces in both the standard and random driven lattice gas models (DLG and RDLG, respectively) is investigated via numerical Monte Carlo simulations in two dimensions. These models consider a lattice gas of density ρ=1/2 with nearest-neighbor attractive interactions between particles under the influence of an external driven field applied along one fixed direction in the case of the DLG model, and a randomly varying direction in the case of the RDLG model. The systems are also in contact with a reservoir at temperature T . Those systems undergo a second-order nonequilibrium phase transition between an ordered state characterized by high-density strips crossing the sample along the driving field, and a quasilattice gas disordered state. For T≲Tc , the average interface width of the strips (W) was measured as a function of the lattice size and the anisotropic shape factor. It was found that the saturation value Wsat2 only depends on the lattice size parallel to the external field axis Ly and exhibits two distinct regimes: Wsat2∝lnLy for low temperatures, that crosses over to Wsat2∝Ly2αI near the critical zone, αI=1/2 being the roughness exponent of the interface. By using the relationship αI=1/(1+ΔI) , the anisotropic exponent for the interface of the DLG model was estimated, giving ΔI≃1 , in agreement with the computed value for anisotropic bulk exponent ΔB in a recently proposed theoretical approach. At the crossover region between both regimes, we observed indications of bulk criticality. The time evolution of W at Tc was also monitored and shows two growing stages: first one observes that W∝lnt for several decades, and in the following times one has W∝tβI , where βI is the dynamic exponent of the interface width. By using this value we estimated the dynamic critical exponent of the correlation length in the perpendicular direction to the external field, giving z⊥I≈4 , which is consistent with the dynamic exponent of the bulk critical transition z⊥B in both theoretical approaches developed for the standard model. A similar scenario was also observed in the RDLG model, suggesting that both models may belong to the same universality class.

Time series analysis for minority game simulations of financial markets

NASA Astrophysics Data System (ADS)

Ferreira, Fernando F.; Francisco, Gerson; Machado, Birajara S.; Muruganandam, Paulsamy

2003-04-01

The minority game (MG) model introduced recently provides promising insights into the understanding of the evolution of prices, indices and rates in the financial markets. In this paper we perform a time series analysis of the model employing tools from statistics, dynamical systems theory and stochastic processes. Using benchmark systems and a financial index for comparison, several conclusions are obtained about the generating mechanism for this kind of evolution. The motion is deterministic, driven by occasional random external perturbation. When the interval between two successive perturbations is sufficiently large, one can find low dimensional chaos in this regime. However, the full motion of the MG model is found to be similar to that of the first differences of the SP500 index: stochastic, nonlinear and (unit root) stationary.

Pre-late heavy bombardment evolution of the Earth's obliquity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Gongjie; Batygin, Konstantin, E-mail: gli@cfa.harvard.edu

2014-11-01

The Earth's obliquity is stabilized by the Moon, which facilitates a rapid precession of the Earth's spin axis, detuning the system away from resonance with orbital modulation. It is, however, likely that the architecture of the solar system underwent a dynamical instability-driven transformation, where the primordial configuration was more compact. Hence, the characteristic frequencies associated with orbital perturbations were likely faster in the past, potentially allowing for secular resonant encounters. In this work, we examine if, at any point in the Earth's evolutionary history, the obliquity varied significantly. Our calculations suggest that even though the orbital perturbations were different, themore » system nevertheless avoided resonant encounters throughout its evolution. This indicates that the Earth obtained its current obliquity during the formation of the Moon.« less

On the kinetics of dendritic sidebranching: A three dimensional phase field study

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shang, Shan; Guo, Zhipeng; Han, Zhiqiang, E-mail: zqhan@tsinghua.edu.cn

2016-04-28

The underlying mechanism for dendritic sidebranching was studied using 3-D phase field modeling. Results showed that in 3-D the requirement of applying the random thermal noise to induce dendritic sidebranching (i.e., normally the case for 2-D phase field simulations) was fully relaxed. The stretching of the secondary or higher order arms occurred spontaneously and symmetrically as the growth of the dendrite. With periodic external perturbation and if the stimulating frequency was lower than a critical value, both tip velocity and sidebranching would get completely synchronized with the perturbation. Whereas if the perturbation frequency was higher than the critical value, rathermore » than increasing, the sidebranching frequency would become stable and maintain at the same magnitude as that of the natural sidebranching, i.e., when no external perturbation was applied. It was shown that the underlying mechanism for sidebranching was deterministic rather than stochastic, and anisotropy tendency and curvature effect were shown to be the most important influence factors. Moreover, the difference of the anisotropy tendency would lead to an uneven distribution of curvature on the solid/liquid interface, i.e., formation of concave and convex geometries. The growth of these geometries would subsequently break the initial spherical structure of solid seed and lead to further sidebranching.« less

Landscape evolution (A Review)

PubMed Central

Sharp, Robert P.

1982-01-01

Landscapes are created by exogenic and endogenic processes acting along the interface between the lithosphere and the atmosphere and hydrosphere. Various landforms result from the attack of weathering and erosion upon the highly heterogeneous lithospheric surface. Landscapes are dynamic, acutely sensitive to natural and artificial perturbation. Undisturbed, they can evolve through a succession of stages to a plain of low relief. Often, the progression of an erosion cycle is interrupted by tectonic or environmental changes; thus, many landscapes preserve vestiges of earlier cycles useful in reconstructing the recent history of Earth's surface. Landforms are bounded by slopes, so their evolution is best understood through study of slopes and the complex of factors controlling slope character and development. The substrate, biosphere, climatic environment, and erosive processes are principal factors. Creep of the disintegrated substrate and surface wash by water are preeminent. Some slopes attain a quasisteady form and recede parallel to themselves (backwearing); others become ever gentler with time (downwearing). The lovely convex/rectilinear/concave profile of many debris-mantled slopes reflects an interplay between creep and surface wash. Landscapes of greatest scenic attraction are usually those in which one or two genetic factors have strongly dominated or those perturbed by special events. Nature has been perturbing landscapes for billions of years, so mankind can learn about landscape perturbation from natural examples. Images

Pressure driven currents near magnetic islands in 3D MHD equilibria: Effects of pressure variation within flux surfaces and of symmetry

NASA Astrophysics Data System (ADS)

Reiman, Allan H.

2016-07-01

In toroidal, magnetically confined plasmas, the heat and particle transport is strongly anisotropic, with transport along the field lines sufficiently strong relative to cross-field transport that the equilibrium pressure can generally be regarded as constant on the flux surfaces in much of the plasma. The regions near small magnetic islands, and those near the X-lines of larger islands, are exceptions, having a significant variation of the pressure within the flux surfaces. It is shown here that the variation of the equilibrium pressure within the flux surfaces in those regions has significant consequences for the pressure driven currents. It is further shown that the consequences are strongly affected by the symmetry of the magnetic field if the field is invariant under combined reflection in the poloidal and toroidal angles. (This symmetry property is called "stellarator symmetry.") In non-stellarator-symmetric equilibria, the pressure-driven currents have logarithmic singularities at the X-lines. In stellarator-symmetric MHD equilibria, the singular components of the pressure-driven currents vanish. These equilibria are to be contrasted with equilibria having B ṡ∇p =0 , where the singular components of the pressure-driven currents vanish regardless of the symmetry. They are also to be contrasted with 3D MHD equilibrium solutions that are constrained to have simply nested flux surfaces, where the pressure-driven current goes like 1 /x near rational surfaces, where x is the distance from the rational surface, except in the case of quasi-symmetric flux surfaces. For the purpose of calculating the pressure-driven currents near magnetic islands, we work with a closed subset of the MHD equilibrium equations that involves only perpendicular force balance, and is decoupled from parallel force balance. It is not correct to use the parallel component of the conventional MHD force balance equation, B ṡ∇p =0 , near magnetic islands. Small but nonzero values of B ṡ∇p are important in this region, and small non-MHD contributions to the parallel force balance equation cannot be neglected there. Two approaches are pursued to solve our equations for the pressure driven currents. First, the equilibrium equations are applied to an analytically tractable magnetic field with an island, obtaining explicit expressions for the rotational transform and magnetic coordinates, and for the pressure-driven current and its limiting behavior near the X-line. The second approach utilizes an expansion about the X-line to provide a more general calculation of the pressure-driven current near an X-line and of the rotational transform near a separatrix. The study presented in this paper is motivated, in part, by tokamak experiments with nonaxisymmetric magnetic perturbations, where significant differences are observed between the behavior of stellarator-symmetric and non-stellarator-symmetric configurations with regard to stabilization of edge localized modes by resonant magnetic perturbations. Implications for the coupling between neoclassical tearing modes, and for magnetic island stability calculations, are also discussed.

Inter-subunit interactions across the upper voltage sensing-pore domain interface contribute to the concerted pore opening transition of Kv channels.

PubMed

Shem-Ad, Tzilhav; Irit, Orr; Yifrach, Ofer

2013-01-01

The tight electro-mechanical coupling between the voltage-sensing and pore domains of Kv channels lies at the heart of their fundamental roles in electrical signaling. Structural data have identified two voltage sensor pore inter-domain interaction surfaces, thus providing a framework to explain the molecular basis for the tight coupling of these domains. While the contribution of the intra-subunit lower domain interface to the electro-mechanical coupling that underlies channel opening is relatively well understood, the contribution of the inter-subunit upper interface to channel gating is not yet clear. Relying on energy perturbation and thermodynamic coupling analyses of tandem-dimeric Shaker Kv channels, we show that mutation of upper interface residues from both sides of the voltage sensor-pore domain interface stabilizes the closed channel state. These mutations, however, do not affect slow inactivation gating. We, moreover, find that upper interface residues form a network of state-dependent interactions that stabilize the open channel state. Finally, we note that the observed residue interaction network does not change during slow inactivation gating. The upper voltage sensing-pore interaction surface thus only undergoes conformational rearrangements during channel activation gating. We suggest that inter-subunit interactions across the upper domain interface mediate allosteric communication between channel subunits that contributes to the concerted nature of the late pore opening transition of Kv channels.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rubinstein, A; Tailor, R; Melancon, A

Purpose: To simulate and measure magnetic-field-induced radiation dose effects in a mouse lung phantom. This data will be used to support pre-clinical experiments related to MRI-guided radiation therapy systems. Methods: A mouse lung phantom was constructed out of 1.5×1.5×2.0-cm{sup 3} lung-equivalent material (0.3 g/cm{sup 3}) surrounded by a 0.6-cm solid water shell. EBT3 film was inserted into the phantom and the phantom was placed between the poles of an H-frame electromagnet. The phantom was irradiated with a cobalt-60 beam (1.25 MeV) with the electromagnet set to various magnetic field strengths (0T, 0.35T, 0.9T, and 1.5T). These magnetic field strengths correspondmore » to the range of field strengths seen in MRI-guided radiation therapy systems. Dose increases at the solid-water-to-lung-interface and dose decreases at the lung-to-solid-water interface were compared with results of Monte Carlo simulations performed with MCNP6. Results: The measured dose to lung at the solid-water-to-lung interface increased by 0%, 16%, and 29% with application of the 0.35T, 0.9T, and 1.5T magnetic fields, respectively. The dose to lung at the lung-to-solid-water interface decreased by 4%, 18%, and 24% with application of the 0.35T, 0.9T, and 1.5T magnetic fields, respectively. Monte Carlo simulations showed dose increases of 0%, 16%, and 31% and dose decreases of 4%, 16%, and 25%. Conclusion: Only small dose perturbations were observed at the lung-solid-water interfaces for the 0.35T case, while more substantial dose perturbations were observed for the 0.9T and 1.5T cases. There is good agreement between the Monte Carlo calculations and the experimental measurements (within 2%). These measurements will aid in designing pre-clinical studies which investigate the potential biological effects of radiation therapy in the presence of a strong magnetic field. This work was partially funded by Elekta.« less

Universal Pinning Energy Barrier for Driven Domain Walls in Thin Ferromagnetic Films

NASA Astrophysics Data System (ADS)

Jeudy, V.; Mougin, A.; Bustingorry, S.; Savero Torres, W.; Gorchon, J.; Kolton, A. B.; Lemaître, A.; Jamet, J.-P.

2016-07-01

We report a comparative study of magnetic field driven domain wall motion in thin films made of different magnetic materials for a wide range of field and temperature. The full thermally activated creep motion, observed below the depinning threshold, is shown to be described by a unique universal energy barrier function. Our findings should be relevant for other systems whose dynamics can be modeled by elastic interfaces moving on disordered energy landscapes.

Exchange across the sediment-water interface quantified from porewater radon profiles

NASA Astrophysics Data System (ADS)

Cook, Peter G.; Rodellas, Valentí; Andrisoa, Aladin; Stieglitz, Thomas C.

2018-04-01

Water recirculation through permeable sediments induced by wave action, tidal pumping and currents enhances the exchange of solutes and fine particles between sediments and overlying waters, and can be an important hydro-biogeochemical process. In shallow water, most of the recirculation is likely to be driven by the interaction of wave-driven oscillatory flows with bottom topography which can induce pressure fluctuations at the sediment-water interface on very short timescales. Tracer-based methods provide the most reliable means for characterizing this short-timescale exchange. However, the commonly applied approaches only provide a direct measure of the tracer flux. Estimating water fluxes requires characterizing the tracer concentration in discharging porewater; this implies collecting porewater samples at shallow depths (usually a few mm, depending on the hydrodynamic dispersivity), which is very difficult with commonly used techniques. In this study, we simulate observed vertical profiles of radon concentration beneath shallow coastal lagoons using a simple water recirculation model that allows us to estimate water exchange fluxes as a function of depth below the sediment-water interface. Estimated water fluxes at the sediment water interface at our site were 0.18-0.25 m/day, with fluxes decreasing exponentially with depth. Uncertainty in dispersivity is the greatest source of error in exchange flux, and results in an uncertainty of approximately a factor-of-five.

The spatial sensitivity of Sp converted waves-kernels and their applications

NASA Astrophysics Data System (ADS)

Mancinelli, N. J.; Fischer, K. M.

2017-12-01

We have developed a framework for improved imaging of strong lateral variations in crust and upper mantle seismic discontinuity structure using teleseismic S-to-P (Sp) scattered waves. In our framework, we rapidly compute scattered wave sensitivities to velocity perturbations in a one-dimensional background model using ray-theoretical methods to account for timing, scattering, and geometrical spreading effects. The kernels accurately describe the amplitude and phase information of a scattered waveform, which we confirm by benchmarking against kernels derived from numerical solutions of the wave equation. The kernels demonstrate that the amplitude of an Sp converted wave at a given time is sensitive to structure along a quasi-hyperbolic curve, such that structure far from the direct ray path can influence the measurements. We use synthetic datasets to explore two potential applications of the scattered wave sensitivity kernels. First, we back-project scattered energy back to its origin using the kernel adjoint operator. This approach successfully images mantle interfaces at depths of 120-180 km with up to 20 km of vertical relief over lateral distances of 100 km (i.e., undulations with a maximal 20% grade) when station spacing is 10 km. Adjacent measurements sum coherently at nodes where gradients in seismic properties occur, and destructively interfere at nodes lacking gradients. In cases where the station spacing is greater than 10 km, the destructive interference can be incomplete, and smearing along the isochrons can occur. We demonstrate, however, that model smoothing can dampen these artifacts. This method is relatively fast, and accurately retrieves the positions of the interfaces, but it generally does not retrieve the strength of the velocity perturbations. Therefore, in our second approach, we attempt to invert directly for velocity perturbations from our reference model using an iterative conjugate-directions scheme.

A comparative study of the single-mode Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Bai, X.; Deng, X.-L.; Jiang, L.

2018-07-01

In this work, the single-mode Richtmyer-Meshkov instability is studied numerically to find a reasonable nonlinear theoretical model which can be applied to predict the interface evolution from the linear stage to the early nonlinear stage. The cut-cell-based sharp-interface methods MuSiC+ (Chang et al. in J Comput Phys 242:946-990, 2013) and CCGF (Bai and Deng in Adv Appl Math Mech 9(5):1052-1075, 2017) are applied to generate numerical results for comparisons. Classical Air-SF6 and Air-Helium conditions are applied in this study, and initial amplitude and Atwood number are varied for comparison. Comparisons to the simulation results from the literature show the applicability of MuSiC+ and CCGF. Comparisons to the nonlinear theoretical models show that ZS (Zhang and Sohn in Phys Lett A 212:149-155, 1996; Phys Fluids 9:1106-1124, 1997), SEA (Sadot et al. in Phys Rev Lett 80:1654-1657, 1998), and DR (Dimonte and Ramaprabhu in Phys Fluids 22:014104, 2010) models are valid for both spike and bubble growth rates, and MIK (Mikaelian in Phys Rev E 67:026319, 2003) and ZG (Zhang and Guo in J Fluid Mech 786:47-61, 2016) models are valid for bubble growth rate, when the initial perturbation is small and the Atwood number is low, but only the DR model is applicable for both spike and bubble growth rates when the initial perturbation amplitude and the Atwood number are large. A new term of non-dimensional initial perturbation amplitude is presented and multiplied to the DR model to get a unified fitted DR model, which gives consistent results to the simulation ones for small and large initial amplitudes.

A comparative study of the single-mode Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Bai, X.; Deng, X.-L.; Jiang, L.

2017-11-01

In this work, the single-mode Richtmyer-Meshkov instability is studied numerically to find a reasonable nonlinear theoretical model which can be applied to predict the interface evolution from the linear stage to the early nonlinear stage. The cut-cell-based sharp-interface methods MuSiC+ (Chang et al. in J Comput Phys 242:946-990, 2013) and CCGF (Bai and Deng in Adv Appl Math Mech 9(5):1052-1075, 2017) are applied to generate numerical results for comparisons. Classical Air-SF6 and Air-Helium conditions are applied in this study, and initial amplitude and Atwood number are varied for comparison. Comparisons to the simulation results from the literature show the applicability of MuSiC+ and CCGF. Comparisons to the nonlinear theoretical models show that ZS (Zhang and Sohn in Phys Lett A 212:149-155, 1996; Phys Fluids 9:1106-1124, 1997), SEA (Sadot et al. in Phys Rev Lett 80:1654-1657, 1998), and DR (Dimonte and Ramaprabhu in Phys Fluids 22:014104, 2010) models are valid for both spike and bubble growth rates, and MIK (Mikaelian in Phys Rev E 67:026319, 2003) and ZG (Zhang and Guo in J Fluid Mech 786:47-61, 2016) models are valid for bubble growth rate, when the initial perturbation is small and the Atwood number is low, but only the DR model is applicable for both spike and bubble growth rates when the initial perturbation amplitude and the Atwood number are large. A new term of non-dimensional initial perturbation amplitude is presented and multiplied to the DR model to get a unified fitted DR model, which gives consistent results to the simulation ones for small and large initial amplitudes.

An Experimental Investigation of Incompressible Richtmyer-Meshkov Instability

NASA Technical Reports Server (NTRS)

Jacobs, J. W.; Niederhaus, C. E.

2002-01-01

Richtmyer-Meshkov (RM) instability occurs when two different density fluids are impulsively accelerated in the direction normal to their nearly planar interface. The instability causes small perturbations on the interface to grow and eventually become a turbulent flow. It is closely related to Rayleigh-Taylor instability, which is the instability of a planar interface undergoing constant acceleration, such as caused by the suspension of a heavy fluid over a lighter one in the earth's gravitational field. Like the well-known Kelvin-Helmholtz instability, RM instability is a fundamental hydrodynamic instability which exhibits many of the nonlinear complexities that transform simple initial conditions into a complex turbulent flow. Furthermore, the simplicity of RM instability (in that it requires very few defining parameters), and the fact that it can be generated in a closed container, makes it an excellent test bed to study nonlinear stability theory as well as turbulent transport in a heterogeneous system. However, the fact that RM instability involves fluids of unequal densities which experience negligible gravitational force, except during the impulsive acceleration, requires RM instability experiments to be carried out under conditions of microgravity. This experimental study investigates the instability of an interface between incompressible, miscible liquids with an initial sinusoidal perturbation. The impulsive acceleration is generated by bouncing a rectangular tank containing two different density liquids off a retractable vertical spring. The initial perturbation is produced prior to release by oscillating the tank in the horizontal direction to produce a standing wave. The instability evolves in microgravity as the tank travels up and then down the vertical rails of a drop tower until hitting a shock absorber at the bottom. Planar Laser Induced Fluorescence (PLIF) is employed to visualize the flow. PLIF images are captured by a video camera that travels with the tank. Figure 1 is as sequence of images showing the development of the instability from the initial sinusoidal disturbance far into the nonlinear regime which is characterized by the appearance of mushroom structures resulting from the coalescence of baroclinic vorticity produced by the impulsive acceleration. At later times in this sequence the vortex cores are observed to become unstable showing the beginnings of the transition to turbulence in this flow. The amplitude of the growing disturbance after the impulsive acceleration is measured and found to agree well with theoretical predictions. The effects of Reynolds number (based on circulation) on the development of the vortices and the transition to turbulence are also determined.

Connecting Interface Structure to Energy Level Alignment at Aqueous Semiconductor Interfaces

NASA Astrophysics Data System (ADS)

Hybertsen, Mark

Understanding structure-function relationships at aqueous semiconductor interfaces presents fundamental challenges, including the discovery of the key interface structure motifs themselves. Important examples include the alignment of electrochemical redox levels with the semiconductor band edges and the identification of catalytic active sites. We have developed a multistep approach, initially demonstrated for GaN, ZnO and their alloys, motivated by measured high efficiency for photocatalytic water oxidation. The interface structure is simulated using ab initio molecular dynamics (AIMD). The calculated, average interface dipole is combined with the GW approach from many-body perturbation theory to calculate the energy level alignment between the semiconductor band edges and the centroid of the occupied 1b1 energy level of water and thus, the electrochemical levels. Cluster models are used to study reaction pathways. The emergent interface motif is the full (GaN) or partial (ZnO) dissociated interface water layer. Here I will focus on the aqueous interfaces to the stable TiO2 anatase (101) and rutile (110) facets. The AIMD calculations reveal interface water dissociation and reassociation processes through distinct pathways: one direct at the interface and the other via a spectator water molecule from the hydration layer. Comparisons between the two interfaces shows that the energy landscape for these pathways depends on the local hydrogen bonding patterns and the interplay with the interface template. Combined results from different initial conditions and AIMD temperatures demonstrate a partially dissociated interface water layer in both cases. Specifically for rutile, structure and the GW-based analysis of the interface energy level alignment agree with experiment. Finally, hole localization at different interface structure motifs will be discussed. Work performed in collaboration with J. Lyons, N. Kharche, M. Ertem and J. Muckerman, done in part at the CFN, which is a U.S. DOE Office of Science Facility, at BNL under Contract No. DE-SC0012704 and with resources from NERSC under Contract No. DE-AC02-05CH11231.

Response function of a moving contact line

NASA Astrophysics Data System (ADS)

Perrin, H.; Belardinelli, D.; Sbragaglia, M.; Andreotti, B.

2018-04-01

The hydrodynamics of a liquid-vapor interface in contact with a heterogeneous surface is largely impacted by the presence of defects at the smaller scales. Such defects introduce morphological disturbances on the contact line and ultimately determine the force exerted on the wedge of liquid in contact with the surface. From the mathematical point of view, defects introduce perturbation modes, whose space-time evolution is governed by the interfacial hydrodynamic equations of the contact line. In this paper we derive the response function of the contact line to such generic perturbations. The contact line response may be used to design simplified one-dimensional time-dependent models accounting for the complexity of interfacial flows coupled to nanoscale defects, yet offering a more tractable mathematical framework to explore contact line motion through a disordered energy landscape.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yeager, John David; Watkins, Erik Benjamin; Duque, Amanda Lynn

Thermal ignition via self-heating (cook-off) of cyclotetramethylene-tetranitramine (HMX)-containing plastic-bonded explosives (PBXs) is driven by the β → δ phase transition in the HMX, which is affected if not dominated by microstructure. Here, we studied the HMX-binder interface and phase transition for several variations of PBX 9404 (HMX with plasticized nitrocellulose [NC] binder). Neutron reflectometry was used to examine the interface under several conditions—pristine, after aging, and after thermal treatment. The initial interfacial structure depended on the plasticizer, but the interface homogenized over time. Thermal and optical analyses showed that all formulated materials had higher transition temperatures than neat HMX. Thismore » effect increased with NC content.« less

Bound-Electron Nonlinearity Beyond the Ionization Threshold.

PubMed

Wahlstrand, J K; Zahedpour, S; Bahl, A; Kolesik, M; Milchberg, H M

2018-05-04

We present absolute space- and time-resolved measurements of the ultrafast laser-driven nonlinear polarizability in argon, krypton, xenon, nitrogen, and oxygen up to ionization fractions of a few percent. These measurements enable determination of the strongly nonperturbative bound-electron nonlinear polarizability well beyond the ionization threshold, where it is found to remain approximately quadratic in the laser field, a result normally expected at much lower intensities where perturbation theory applies.

Bound-Electron Nonlinearity Beyond the Ionization Threshold

NASA Astrophysics Data System (ADS)

Wahlstrand, J. K.; Zahedpour, S.; Bahl, A.; Kolesik, M.; Milchberg, H. M.

2018-05-01

We present absolute space- and time-resolved measurements of the ultrafast laser-driven nonlinear polarizability in argon, krypton, xenon, nitrogen, and oxygen up to ionization fractions of a few percent. These measurements enable determination of the strongly nonperturbative bound-electron nonlinear polarizability well beyond the ionization threshold, where it is found to remain approximately quadratic in the laser field, a result normally expected at much lower intensities where perturbation theory applies.

Explosively driven two-shockwave tools with application to ejecta formation at the Los Alamos National Laboratory Proton Radiography Facility

NASA Astrophysics Data System (ADS)

Buttler, William

2013-06-01

We present the development of an explosively driven physics tool to generate two mostly uniaxial shockwaves. The tool is being used to extend single shockwave ejecta models to a subsequent shockwave event separated by a time interval on the order of a few microseconds. We explore the possibility of varying the amplitude of both the first and second shockwaves, and we apply the tool in experimental geometries on Sn with a surface roughness of Ra = 0 . 8 μ m. We then evaluate the tool further at the Los Alamos National Laboratory Proton Radiography (pRad) Facility in an application to Sn with larger scale perturbations of wavelength 550 μ m, and various amplitudes that gave wave-number amplitude products of η0 2 π / λ = { 3 / 4 , 1 / 2 , 1 / 4 , 1 / 8 } , where the perturbation amplitude is η0, and the wave-number k = 2 π / λ . The pRad data and velocimetry imply it should be possible to develop a second shock ejecta model based on unstable Richtmyer-Meshkov physics. In collaboration with David Oro, Fesseha Mariam, Alexander Saunders, Malcolm Andrews, Frank Cherne, James Hammerberg. Robert Hixson, Christopher Morris, Russell Olson, Dean Preston, Joseph Stone, Dale Tupa, and Wendy Vogan-McNeil, Los Alamos National Laboratory,

Spiral waves in driven dusty plasma medium: Generalized hydrodynamic fluid description

NASA Astrophysics Data System (ADS)

Kumar, Sandeep; Patel, Bhavesh; Das, Amita

2018-04-01

Spiral waves are observed in many natural phenomena. They have been extensively represented by the mathematical FitzHugh-Nagumo model [Barkley et al., Phys. Rev. A 42, 2489 (1990)] of excitable media. Also, in incompressible fluid simulations, the excitation of thermal spiral waves has been reported by Li et al. [Phys. of Fluids 22, 011701 (2010)]. In the present paper, the spatiotemporal development of spiral waves in the context of weak and strong coupling limits has been shown. While the weakly coupled medium has been represented by a simple fluid description, for strong coupling, a generalized visco-elastic fluid description has been employed. The medium has been driven by an external force in the form of a rotating electric field. It is shown that when the amplitude of force is small, the density perturbations in the medium are also small. In this case, the excitations do not develop as a spiral wave. Only when the amplitude of force is high so as to drive the density perturbations to nonlinear amplitudes does the spiral density wave formation occurs. The role of the forcing frequency and the effect of strong coupling and the sound velocity of medium in the formation and evolution of spiral waves have been investigated in detail.

Model-driven discovery of underground metabolic functions in Escherichia coli.

PubMed

Guzmán, Gabriela I; Utrilla, José; Nurk, Sergey; Brunk, Elizabeth; Monk, Jonathan M; Ebrahim, Ali; Palsson, Bernhard O; Feist, Adam M

2015-01-20

Enzyme promiscuity toward substrates has been discussed in evolutionary terms as providing the flexibility to adapt to novel environments. In the present work, we describe an approach toward exploring such enzyme promiscuity in the space of a metabolic network. This approach leverages genome-scale models, which have been widely used for predicting growth phenotypes in various environments or following a genetic perturbation; however, these predictions occasionally fail. Failed predictions of gene essentiality offer an opportunity for targeting biological discovery, suggesting the presence of unknown underground pathways stemming from enzymatic cross-reactivity. We demonstrate a workflow that couples constraint-based modeling and bioinformatic tools with KO strain analysis and adaptive laboratory evolution for the purpose of predicting promiscuity at the genome scale. Three cases of genes that are incorrectly predicted as essential in Escherichia coli--aspC, argD, and gltA--are examined, and isozyme functions are uncovered for each to a different extent. Seven isozyme functions based on genetic and transcriptional evidence are suggested between the genes aspC and tyrB, argD and astC, gabT and puuE, and gltA and prpC. This study demonstrates how a targeted model-driven approach to discovery can systematically fill knowledge gaps, characterize underground metabolism, and elucidate regulatory mechanisms of adaptation in response to gene KO perturbations.

A 2D virtual reality system for visual goal-driven navigation in zebrafish larvae

PubMed Central

Jouary, Adrien; Haudrechy, Mathieu; Candelier, Raphaël; Sumbre, German

2016-01-01

Animals continuously rely on sensory feedback to adjust motor commands. In order to study the role of visual feedback in goal-driven navigation, we developed a 2D visual virtual reality system for zebrafish larvae. The visual feedback can be set to be similar to what the animal experiences in natural conditions. Alternatively, modification of the visual feedback can be used to study how the brain adapts to perturbations. For this purpose, we first generated a library of free-swimming behaviors from which we learned the relationship between the trajectory of the larva and the shape of its tail. Then, we used this technique to infer the intended displacements of head-fixed larvae, and updated the visual environment accordingly. Under these conditions, larvae were capable of aligning and swimming in the direction of a whole-field moving stimulus and produced the fine changes in orientation and position required to capture virtual prey. We demonstrate the sensitivity of larvae to visual feedback by updating the visual world in real-time or only at the end of the discrete swimming episodes. This visual feedback perturbation caused impaired performance of prey-capture behavior, suggesting that larvae rely on continuous visual feedback during swimming. PMID:27659496

Inter-species pathway perturbation prediction via data-driven detection of functional homology.

PubMed

Hafemeister, Christoph; Romero, Roberto; Bilal, Erhan; Meyer, Pablo; Norel, Raquel; Rhrissorrakrai, Kahn; Bonneau, Richard; Tarca, Adi L

2015-02-15

Experiments in animal models are often conducted to infer how humans will respond to stimuli by assuming that the same biological pathways will be affected in both organisms. The limitations of this assumption were tested in the IMPROVER Species Translation Challenge, where 52 stimuli were applied to both human and rat cells and perturbed pathways were identified. In the Inter-species Pathway Perturbation Prediction sub-challenge, multiple teams proposed methods to use rat transcription data from 26 stimuli to predict human gene set and pathway activity under the same perturbations. Submissions were evaluated using three performance metrics on data from the remaining 26 stimuli. We present two approaches, ranked second in this challenge, that do not rely on sequence-based orthology between rat and human genes to translate pathway perturbation state but instead identify transcriptional response orthologs across a set of training conditions. The translation from rat to human accomplished by these so-called direct methods is not dependent on the particular analysis method used to identify perturbed gene sets. In contrast, machine learning-based methods require performing a pathway analysis initially and then mapping the pathway activity between organisms. Unlike most machine learning approaches, direct methods can be used to predict the activation of a human pathway for a new (test) stimuli, even when that pathway was never activated by a training stimuli. Gene expression data are available from ArrayExpress (accession E-MTAB-2091), while software implementations are available from http://bioinformaticsprb.med.wayne.edu?p=50 and http://goo.gl/hJny3h. christoph.hafemeister@nyu.edu or atarca@med.wayne.edu. Supplementary data are available at Bioinformatics online. Published by Oxford University Press 2014. This work is written by US Government employees and is in the public domain in the US.

Non-radial instabilities and progenitor asphericities in core-collapse supernovae

NASA Astrophysics Data System (ADS)

Müller, B.; Janka, H.-Th.

2015-04-01

Since core-collapse supernova simulations still struggle to produce robust neutrino-driven explosions in 3D, it has been proposed that asphericities caused by convection in the progenitor might facilitate shock revival by boosting the activity of non-radial hydrodynamic instabilities in the post-shock region. We investigate this scenario in depth using 42 relativistic 2D simulations with multigroup neutrino transport to examine the effects of velocity and density perturbations in the progenitor for different perturbation geometries that obey fundamental physical constraints (like the anelastic condition). As a framework for analysing our results, we introduce semi-empirical scaling laws relating neutrino heating, average turbulent velocities in the gain region, and the shock deformation in the saturation limit of non-radial instabilities. The squared turbulent Mach number, , reflects the violence of aspherical motions in the gain layer, and explosive runaway occurs for ≳ 0.3, corresponding to a reduction of the critical neutrino luminosity by ˜ 25 per cent compared to 1D. In the light of this theory, progenitor asphericities aid shock revival mainly by creating anisotropic mass flux on to the shock: differential infall efficiently converts velocity perturbations in the progenitor into density perturbations δρ/ρ at the shock of the order of the initial convective Mach number Maprog. The anisotropic mass flux and ram pressure deform the shock and thereby amplify post-shock turbulence. Large-scale (ℓ = 2, ℓ = 1) modes prove most conducive to shock revival, whereas small-scale perturbations require unrealistically high convective Mach numbers. Initial density perturbations in the progenitor are only of the order of Ma_prog^2 and therefore play a subdominant role.

Numerical simulations of the convective flame in white dwarfs

NASA Technical Reports Server (NTRS)

Livne, Eli

1993-01-01

A first step toward better understanding of the mechanism driving convective flames in exploding white dwarfs is presented. The propagation of the convective flame is examined using a two-dimensional implicit hydrodynamical code. The large scales of the instability are captured by the grid while the scales that are smaller than the grid resolution are approximated by a mixing-length approximation. It is found that largescale perturbations (of order of the pressure scale height) do grow significantly during the expansion, leading to a very nonspherical burning front. The combustion rate is strongly enhanced (compared to the unperturbed case) during the first second, but later the expansion of the star suppresses the flame speed, leading to only partial incineration of the nuclear fuel. Our results imply that large-scale perturbations by themselves are not enough to explain the mechanism by which convective flames are driven, and a study of the whole spectrum of relevant perturbations is needed. The implications of these preliminary results on future simulations, in the context of current models for Type Ia supernovae, are discussed.

Suppressing magnetic island growth by resonant magnetic perturbation

NASA Astrophysics Data System (ADS)

Yu, Q.; Günter, S.; Lackner, K.

2018-05-01

The effect of externally applied resonant magnetic perturbations (RMPs) on the growth of magnetic islands is investigated based on two-fluid equations. It is found that if the local bi-normal electron fluid velocity at the resonant surface is sufficiently large, static RMPs of the same helicity and of moderate amplitude can suppress the growth of magnetic islands in high-temperature plasmas. These islands will otherwise grow, driven by an unfavorable plasma current density profile and bootstrap current perturbation. These results indicate that the error field can stabilize island growth, if the error field amplitude is not too large and the local bi-normal electron fluid velocity is not too low. They also indicate that applied rotating RMPs with an appropriate frequency can be utilized to suppress island growth in high-temperature plasmas, even for a low bi-normal electron fluid velocity. A significant change in the local equilibrium plasma current density gradient by small amplitude RMPs is found for realistic plasma parameters, which are important for the island stability and are expected to be more important for fusion reactors with low plasma resistivity.

Flow dynamics and salt transport in a coastal aquifer driven by a stratified saltwater body: Lab experiment and numerical modeling

NASA Astrophysics Data System (ADS)

Oz, Imri; Shalev, Eyal; Yechieli, Yoseph; Gavrieli, Ittai; Gvirtzman, Haim

2014-04-01

This paper examines the transient development and the steady-state configuration of groundwater within a coastal aquifer adjacent to a stratified saltwater body. Such systems consist of three different water types: the regional fresh groundwater, and low and high salinity brines forming the upper and lower water layers of the stratified water body, respectively. The dynamics, location and the geometry of the interfaces and the density-driven circulation flows that develop in the aquifer are examined using laboratory experiments and numerical modeling at the same scale. The results show that the transient intrusion of the different water bodies into the aquifer takes place at different rates, and that the locations of the interfaces between them change with time, before reaching steady-state. Under steady-state conditions both the model and the experiments show the existence of three interfaces between the three water types. The numerical model, which is calibrated against the salinity distribution and groundwater discharge rate in the laboratory experiments, allows the quantification of the flow rates and flow patterns within the aquifer. These flow patterns, which cannot be derived from laboratory experiments, show the transient development of three circulation cells which are confined between the three interfaces. These results confirm the hypothesis that has been previously suggested based solely on a steady-state numerical modeling defined by a conceptual understanding. Parametric analysis shows that the creation of three circulation cells and three interfaces is limited to certain conditions and defines the ranges for the creation of this unique system.

Sedimentation from flocculated suspensions in the presence of settling-driven gravitational interface instabilities

NASA Astrophysics Data System (ADS)

Rouhnia, Mohamad; Strom, Kyle

2015-09-01

We experimentally examine sedimentation from a freshwater suspension of clay flocs overlying saltwater in the presence of gravitational instabilities. The study seeks to determine: (1) if flocculation hampers or alters interface instability formation; (2) how the removal rates of sediment from the buoyant layer compare to those predicted by individual floc settling; and (3) whether or not it is possible to develop a model for effective settling velocity. The experiments were conducted in a tank at isothermal conditions. All experiments were initially stably stratified but later developed instabilities near the interface that grew into downward convecting plumes of fluid and sediment. Throughout, we measured sediment concentration in the upper and lower layers, floc size, and plume descent rates. The data showed that flocculation modifies the mixture settling velocity, and therefore shifts the mode of interface instability from double-diffusive (what one would expect from unflocculated clay) to settling-driven leaking and Rayleigh-Taylor instability formation. Removal rates of sediment from the upper layer in the presence of these instabilities were on the same order of magnitude as those predicted by individual floc settling. However, removal rates were found to better correlate with the speed of the interface plumes. A simple force-balance model was found to be capable of reasonably describing plume velocity based on concentration in the buoyant layer. This relation, coupled with a critical Grashof number and geometry relations, allowed us to develop a model for the effective settling velocity of the mixture based solely on integral values of the upper layer.

SASI ACTIVITY IN THREE-DIMENSIONAL NEUTRINO-HYDRODYNAMICS SIMULATIONS OF SUPERNOVA CORES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hanke, Florian; Mueller, Bernhard; Wongwathanarat, Annop

The relevance of the standing accretion shock instability (SASI) compared to neutrino-driven convection in three-dimensional (3D) supernova-core environments is still highly controversial. Studying a 27 M{sub Sun} progenitor, we demonstrate, for the first time, that violent SASI activity can develop in 3D simulations with detailed neutrino transport despite the presence of convection. This result was obtained with the PROMETHEUS-VERTEX code with the same sophisticated neutrino treatment so far used only in one-dimensional and two-dimensional (2D) models. While buoyant plumes initially determine the nonradial mass motions in the postshock layer, bipolar shock sloshing with growing amplitude sets in during a phasemore » of shock retraction and turns into a violent spiral mode whose growth is only quenched when the infall of the Si/SiO interface leads to strong shock expansion in response to a dramatic decrease of the mass accretion rate. In the phase of large-amplitude SASI sloshing and spiral motions, the postshock layer exhibits nonradial deformation dominated by the lowest-order spherical harmonics (l = 1, m = 0, {+-}1) in distinct contrast to the higher multipole structures associated with neutrino-driven convection. We find that the SASI amplitudes, shock asymmetry, and nonradial kinetic energy in three dimensions can exceed those of the corresponding 2D case during extended periods of the evolution. We also perform parameterized 3D simulations of a 25 M{sub Sun} progenitor, using a simplified, gray neutrino transport scheme, an axis-free Yin-Yang grid, and different amplitudes of random seed perturbations. They confirm the importance of the SASI for another progenitor, its independence of the choice of spherical grid, and its preferred growth for fast accretion flows connected to small shock radii and compact proto-neutron stars as previously found in 2D setups.« less

A Coupled Model of Stress-Driven Frictional Afterslip and Viscoelastic Relaxation Following the 2011 Tohoku-oki Earthquake

NASA Astrophysics Data System (ADS)

Fukuda, J.; Johnson, K. M.

2017-12-01

Postseismic deformation following the 2011 Mw9.0 Tohoku-oki earthquake has been captured by both on-land GNSS and seafloor GPS/Acoustic networks. Previous studies have shown that the observed postseismic displacements can be reproduced as the sum of contributions from viscoelastic relaxation of coseismic stress changes in the upper mantle and afterslip on the plate interface surrounding the coseismic rupture. In most previous studies, viscoelastic relaxation and afterslip were modeled separately and afterslip was estimated kinematically. In this study, we develop a mechanical model of postseismic deformation in which afterslip and viscoelastic relaxation are driven by coseismic stress perturbations and are mechanically coupled. We assume that afterslip is governed by a rate-strengthening friction law that is characterized with a friction parameter (a-b)*sigma, where a-b represents the rate dependence of steady-state friction and sigma is the effective normal stress. Viscoelastic relaxation of the upper mantle is modeled with a biviscous Burgers rheology that is characterized with the steady-state and transient viscosities. We calculate the evolution of afterslip and viscoelastic relaxation using stress changes computed from an assumed coseismic slip model as the initial condition. We examine the effects of the friction parameters, mantle viscosities, elastic thickness of the slab and upper plate, and coseismic slip distribution on the model prediction and explore the range of the parameters that can fit the observed postseismic displacements. We find that the vertical postseismic displacements are particularly sensitive to these parameters. Our modeling results indicate that the on-land postseismic deformation is dominated by afterslip, whereas the seafloor postseismic deformation is dominated by viscoelastic relaxation. We also examine if afterslip overlaps regions that ruptured seismically during M6.3-7.2 earthquakes between 2003 and 2010. We find that significant overlap between afterslip and the historical M6.3-7.2 coseismic rupture areas are required to fit the horizontal postseismic displacements.

Electrically driven spin qubit based on valley mixing

NASA Astrophysics Data System (ADS)

Huang, Wister; Veldhorst, Menno; Zimmerman, Neil M.; Dzurak, Andrew S.; Culcer, Dimitrie

2017-02-01

The electrical control of single spin qubits based on semiconductor quantum dots is of great interest for scalable quantum computing since electric fields provide an alternative mechanism for qubit control compared with magnetic fields and can also be easier to produce. Here we outline the mechanism for a drastic enhancement in the electrically-driven spin rotation frequency for silicon quantum dot qubits in the presence of a step at a heterointerface. The enhancement is due to the strong coupling between the ground and excited states which occurs when the electron wave function overcomes the potential barrier induced by the interface step. We theoretically calculate single qubit gate times tπ of 170 ns for a quantum dot confined at a silicon/silicon-dioxide interface. The engineering of such steps could be used to achieve fast electrical rotation and entanglement of spin qubits despite the weak spin-orbit coupling in silicon.

Transforming Collaborative Process Models into Interface Process Models by Applying an MDA Approach

NASA Astrophysics Data System (ADS)

Lazarte, Ivanna M.; Chiotti, Omar; Villarreal, Pablo D.

Collaborative business models among enterprises require defining collaborative business processes. Enterprises implement B2B collaborations to execute these processes. In B2B collaborations the integration and interoperability of processes and systems of the enterprises are required to support the execution of collaborative processes. From a collaborative process model, which describes the global view of the enterprise interactions, each enterprise must define the interface process that represents the role it performs in the collaborative process in order to implement the process in a Business Process Management System. Hence, in this work we propose a method for the automatic generation of the interface process model of each enterprise from a collaborative process model. This method is based on a Model-Driven Architecture to transform collaborative process models into interface process models. By applying this method, interface processes are guaranteed to be interoperable and defined according to a collaborative process.

High-resolution method for evolving complex interface networks

NASA Astrophysics Data System (ADS)

Pan, Shucheng; Hu, Xiangyu Y.; Adams, Nikolaus A.

2018-04-01

In this paper we describe a high-resolution transport formulation of the regional level-set approach for an improved prediction of the evolution of complex interface networks. The novelty of this method is twofold: (i) construction of local level sets and reconstruction of a global level set, (ii) local transport of the interface network by employing high-order spatial discretization schemes for improved representation of complex topologies. Various numerical test cases of multi-region flow problems, including triple-point advection, single vortex flow, mean curvature flow, normal driven flow, dry foam dynamics and shock-bubble interaction show that the method is accurate and suitable for a wide range of complex interface-network evolutions. Its overall computational cost is comparable to the Semi-Lagrangian regional level-set method while the prediction accuracy is significantly improved. The approach thus offers a viable alternative to previous interface-network level-set method.

Centrifugal fingering in a curved Hele-Shaw cell: A generalized Euler's elastica shape for the two-fluid interface

NASA Astrophysics Data System (ADS)

Miranda, Jose; Brandao, Rodolfo

2017-11-01

We study a family of generalized elastica-like equilibrium shapes that arise at the interface separating two fluids in a curved rotating Hele-Shaw cell. This family of stationary interface solutions consists of shapes that balance the competing capillary and centrifugal forces in such a curved flow environment. We investigate how the emerging interfacial patterns are impacted by changes in the geometric properties of the curved Hele-Shaw cell. A vortex-sheet formalism is used to calculate the two-fluid interface curvature, and a gallery of possible shapes is provided to highlight a number of peculiar morphological features. A linear perturbation theory is employed to show that the most prominent aspects of these complex stationary patterns can be fairly well reproduced by the interplay of just two interfacial modes. The connection of these dominant modes to the geometry of the curved cell, as well as to the fluid dynamic properties of the flow, is discussed. We thank CNPq (Brazilian Research Council) for financial support under Grant No. 304821/2015-2.

Thermal transport study across interface “nanostructured solid surface / fluid” by photoacoustic technique

NASA Astrophysics Data System (ADS)

Voitenko, K.; Isaiev, M.; Pastushenko, A.; Andrusenko, D.; Kuzmich, A.; Lysenko, V.; Burbelo, R.

2017-01-01

In the paper the experimental study of heat transport across the interface “porous silicon/liquid” by photoacoustic technique is reported. Two cases with and without liquid covering of porous silicon surface were considered. Thermal perturbations were excited at the surface of porous silicon as a result of absorption of the light with modulated intensity. The resulting thermal-elastic stresses arising in the system were registered with piezoelectric transducer. The amplitude-frequency dependencies of the voltage on the piezoelectric electrodes were measured. The presence of the liquid film leads to decreasing of the amplitude of photoacoustic signal as a result of the thermal energy evacuation from the porous silicon into the liquid. The experimental dependencies were fitted with the results of simulation that takes into account heat fluxes separation at the porous silicon/liquid interface. With the presented method one can precisely measure heat fluxes transferred from the solid into contacting fluid. Moreover, the presented approach can be easily adopted for the thermal conductivity study of the different nanofluids as well as thermal resistance at the interface nanostructured solid/fluid.

Interfacial Effects on the Band Edges of Functionalized Si Surfaces in Liquid Water

DOE PAGES

Pham, Tuan Anh; Lee, Donghwa; Schwegler, Eric; ...

2014-11-17

By combining ab initio molecular dynamics simulations and many-body perturbation theory calculations of electronic energy levels, we determined the band edge positions of functionalized Si(111) surfaces in the presence of liquid water, with respect to vacuum and to water redox potentials. We considered surface terminations commonly used for Si photoelectrodes in water splitting experiments. We found that, when exposed to water, the semiconductor band edges were shifted by approximately 0.5 eV in the case of hydrophobic surfaces, irrespective of the termination. The effect of the liquid on band edge positions of hydrophilic surfaces was much more significant and determined bymore » a complex combination of structural and electronic effects. These include structural rearrangements of the semiconductor surfaces in the presence of water, changes in the orientation of interfacial water molecules with respect to the bulk liquid, and charge transfer at the interfaces, between the solid and the liquid. Our results showed that the use of many-body perturbation theory is key to obtain results in agreement with experiments; they also showed that the use of simple computational schemes that neglect the detailed microscopic structure of the solid–liquid interface may lead to substantial errors in predicting the alignment between the solid band edges and water redox potentials.« less

Modeling time-coincident ultrafast electron transfer and solvation processes at molecule-semiconductor interfaces

NASA Astrophysics Data System (ADS)

Li, Lesheng; Giokas, Paul G.; Kanai, Yosuke; Moran, Andrew M.

2014-06-01

Kinetic models based on Fermi's Golden Rule are commonly employed to understand photoinduced electron transfer dynamics at molecule-semiconductor interfaces. Implicit in such second-order perturbative descriptions is the assumption that nuclear relaxation of the photoexcited electron donor is fast compared to electron injection into the semiconductor. This approximation breaks down in systems where electron transfer transitions occur on 100-fs time scale. Here, we present a fourth-order perturbative model that captures the interplay between time-coincident electron transfer and nuclear relaxation processes initiated by light absorption. The model consists of a fairly small number of parameters, which can be derived from standard spectroscopic measurements (e.g., linear absorbance, fluorescence) and/or first-principles electronic structure calculations. Insights provided by the model are illustrated for a two-level donor molecule coupled to both (i) a single acceptor level and (ii) a density of states (DOS) calculated for TiO2 using a first-principles electronic structure theory. These numerical calculations show that second-order kinetic theories fail to capture basic physical effects when the DOS exhibits narrow maxima near the energy of the molecular excited state. Overall, we conclude that the present fourth-order rate formula constitutes a rigorous and intuitive framework for understanding photoinduced electron transfer dynamics that occur on the 100-fs time scale.

Bifurcation Analysis of 1D Steady States of the Bénard Problem in the Long Wavelength Limit

NASA Astrophysics Data System (ADS)

Zhou, Chengzhe; Troian, Sandra

2015-11-01

We investigate the character and stability of stationary states of the (1 + 1) D evolution equation ∂t h +h3hxxx +h2∂x γ x = 0 describing the motion of an interface h (x , t) separating a thin warm viscous film from a thin cool inviscid layer where γ = γ (h) represents the interfacial tension. The phase diagram corresponding to all positive periodic steady states (PPSS) is specified by two variables - the global extrema of the equilibrum shape and a generalized mechanical interface pressure. The analytic forms describing the PPSS shapes, the minimal period, the average height and the generalized free energy are all confirmed numerically. We find there is at most one non-trivial PPSS for specified period and volume. We also find no stable perturbed PPSS near the critical point for volume conserving perturbations of identical period. A weakly non-linear analysis about the critical point yields bifurcations of the pitchfork-type. For all non-trivial PPSS, we verify the unstable nature of the PPSS by transforming the non-normal operator (resulting from the spatially inhomogeneous PPSS) to normal form, which we then solve by finite element computations.

Sloshing dynamics modulated fluid angular momentum and moment fluctuations driven by orbital gravity gradient and jitter accelerations in microgravity

NASA Technical Reports Server (NTRS)

Hung, R. J.; Pan, H. L.

1995-01-01

The dynamical behavior of spacecraft propellant affected by the asymmetric combined gravity gradient and jitter accelerations, in particular the effect of surface tension on partially-filled rotating fluids applicable to a full-scale Gravity Probe-B Spacecraft dewar tank has been investigated. Three different cases of orbital accelerations: (1) gravity gradient-dominated, (2) equally weighted between gravity gradient and jitter, and (3) gravity jitter-dominated accelerations are studied. The results of slosh wave excitation along the liquid-vapor interface induced by gravity gradient-dominated accelerations provide a torsional moment with tidal motion of bubble oscillations in the rotating dewar. The results are clearly seen from the twisting shape of the bubble oscillations driven by gravity gradient-dominated acceleration. The results of slosh wave excitation along the liquid-vapor interface induced by gravity jitter-dominated acceleration indicate the results of bubble motion in a manner of down-and-up and leftward-and-rightward movement of oscillation when the bubble is rotating with respect to rotating dewar axis. Fluctuations of angular momentum, fluid moment and bubble mass center caused by slosh wave excitations driven by gravity gradient acceleration or gravity jitter acceleration are also investigated.

The crystal structure of the regulatory domain of the human sodium-driven chloride/bicarbonate exchanger.

PubMed

Alvadia, Carolina M; Sommer, Theis; Bjerregaard-Andersen, Kaare; Damkier, Helle Hasager; Montrasio, Michele; Aalkjaer, Christian; Morth, J Preben

2017-09-21

The sodium-driven chloride/bicarbonate exchanger (NDCBE) is essential for maintaining homeostatic pH in neurons. The crystal structure at 2.8 Å resolution of the regulatory N-terminal domain of human NDCBE represents the first crystal structure of an electroneutral sodium-bicarbonate cotransporter. The crystal structure forms an equivalent dimeric interface as observed for the cytoplasmic domain of Band 3, and thus establishes that the consensus motif VTVLP is the key minimal dimerization motif. The VTVLP motif is highly conserved and likely to be the physiologically relevant interface for all other members of the SLC4 family. A novel conserved Zn 2+ -binding motif present in the N-terminal domain of NDCBE is identified and characterized in vitro. Cellular studies confirm the Zn 2+ dependent transport of two electroneutral bicarbonate transporters, NCBE and NBCn1. The Zn 2+ site is mapped to a cluster of histidines close to the conserved ETARWLKFEE motif and likely plays a role in the regulation of this important motif. The combined structural and bioinformatics analysis provides a model that predicts with additional confidence the physiologically relevant interface between the cytoplasmic domain and the transmembrane domain.

Pattern formation study of dissolution-driven convection

NASA Astrophysics Data System (ADS)

Aljahdaly, Noufe; Hadji, Layachi

2017-11-01

A three-dimensional pattern formation analysis is performed to investigate the dissolution-driven convection induced by the sequestration of carbon dioxide. We model this situation by considering a Rayleigh-Taylor like base state consisting of carbon-rich heavy brine overlying a carbon-free layer and seek, through a linear stability analysis, the instability threshold conditions as function of the thickness of the CO2-rich brine layer. Our model accounts for carbon diffusion anisotropy, permeability dependence on depth and the presence of a first order chemical reaction between the carbon-rich brine and host mineralogy. A small amplitude nonlinear stability analysis is performed to isolate the preferred regular pattern and solute flux conditions at the interface. The latter are used to derive equations for the time and space evolution of the interface as it migrates upward. We quantify the terminal time when the interface reaches the top boundary as function of the type of solute boundary conditions at the top boundary thereby also quantifying the beginning of the shutdown regime. The analysis will also shed light on the development of the three-dimensional fingering pattern that is observed when the constant flux regime is attained.

A Proposed Intelligent Policy-Based Interface for a Mobile eHealth Environment

NASA Astrophysics Data System (ADS)

Tavasoli, Amir; Archer, Norm

Users of mobile eHealth systems are often novices, and the learning process for them may be very time consuming. In order for systems to be attractive to potential adopters, it is important that the interface should be very convenient and easy to learn. However, the community of potential users of a mobile eHealth system may be quite varied in their requirements, so the system must be able to adapt easily to suit user preferences. One way to accomplish this is to have the interface driven by intelligent policies. These policies can be refined gradually, using inputs from potential users, through intelligent agents. This paper develops a framework for policy refinement for eHealth mobile interfaces, based on dynamic learning from user interactions.

Random perturbations of a periodically driven nonlinear oscillator: escape from a resonance zone

NASA Astrophysics Data System (ADS)

Lingala, Nishanth; Sri Namachchivaya, N.; Pavlyukevich, Ilya

2017-04-01

For nonlinear oscillators, frequency of oscillations depends on the oscillation amplitude. When a nonlinear oscillator is periodically driven, the phase space consists of many resonance zones where the oscillator frequency and the driving frequency are commensurable. It is well known that, a small subset of initial conditions can lead to capture in one of the resonance zones. In this paper we study the effect of weak noise on the escape from a resonance zone. Using averaging techniques we obtain the mean exit time from a resonance zone and study the dependence of the exit rate on the parameters of the oscillator. Paper dedicated to Professor Peter W Sauer of University of Illinois on the occasion of his 70th birthday.

Effects of flow on insulin fibril formation at an air/water interface

NASA Astrophysics Data System (ADS)

Posada, David; Heldt, Caryn; Sorci, Mirco; Belfort, Georges; Hirsa, Amir

2009-11-01

The amyloid fibril formation process, which is implicated in several diseases such as Alzheimer's and Huntington's, is characterized by the conversion of monomers to oligomers and then to fibrils. Besides well-studied factors such as pH, temperature and concentration, the kinetics of this process are significantly influenced by the presence of solid or fluid interfaces and by flow. By studying the nucleation and growth of a model system (insulin fibrils) in a well-defined flow field with an air/water interface, we can identify the flow conditions that impact protein aggregation kinetics both in the bulk solution and at the air/water interface. The present flow system (deep-channel surface viscometer) consists of an annular region bounded by stationary inner and outer cylinders, an air/water interface, and a floor driven at constant rotation. We show the effects of Reynolds number on the kinetics of the fibrillation process both in the bulk solution and at the air/water interface, as well as on the structure of the resultant amyloid aggregates.

Size-dependent protein segregation at membrane interfaces

NASA Astrophysics Data System (ADS)

Schmid, Eva M.; Bakalar, Matthew H.; Choudhuri, Kaushik; Weichsel, Julian; Ann, Hyoung Sook; Geissler, Phillip L.; Dustin, Michael L.; Fletcher, Daniel A.

2016-07-01

Membrane interfaces formed at cell-cell junctions are associated with characteristic patterns of membrane proteins whose organization is critical for intracellular signalling. To isolate the role of membrane protein size in pattern formation, we reconstituted model membrane interfaces in vitro using giant unilamellar vesicles decorated with synthetic binding and non-binding proteins. We show that size differences between membrane proteins can drastically alter their organization at membrane interfaces, with as little as a ~5 nm increase in non-binding protein size driving its exclusion from the interface. Combining in vitro measurements with Monte Carlo simulations, we find that non-binding protein exclusion is also influenced by lateral crowding, binding protein affinity, and thermally driven membrane height fluctuations that transiently limit access to the interface. This sensitive and highly effective means of physically segregating proteins has implications for cell-cell contacts such as T-cell immunological synapses (for example, CD45 exclusion) and epithelial cell junctions (for example, E-cadherin enrichment), as well as for protein sorting at intracellular contact points between membrane-bound organelles.

Interface-based two-way tuning of the in-plane thermal transport in nanofilms

NASA Astrophysics Data System (ADS)

Hua, Yu-Chao; Cao, Bing-Yang

2018-03-01

Here, the two-way tuning of in-plane thermal transport is obtained in the bi-layer nanofilms with an interfacial effect by using the Boltzmann transport equation (BTE) and the phonon Monte Carlo (MC) technique. A thermal conductivity model was derived from the BTE and verified by the MC simulations. Both the model and the MC simulations indicate that the tuning of the thermal transport can be bidirectional (reduced or enhanced), depending on the interface conditions (i.e., roughness and adhesion energy) and the phonon property dissimilarity at the interface. For the identical-material interface, the emergence of thermal conductivity variation requires two conditions: (a) the interface is not completely specular and (b) the transmission specularity parameter differs from the reflection specularity parameter at the interface. When the transmission specularity parameter is larger than the reflection specularity parameter at the interface, the thermal conductivity improvement effect emerges, whereas the thermal conductivity reduction effect occurs. For the disparate-material interface, the phonon property perturbation near the interface causes the thermal conductivity variation, even when neither the above two conditions are satisfied. The mean free path ratio (γ) between the disparate materials was defined to characterize the phonon property dissimilarity. γ > 1 can lead to the thermal conductivity improvement effect, while γ < 1 corresponds to the thermal conductivity reduction effect. Our work provides a more in-depth understanding of the interfacial effect on the nanoscale thermal transport, with an applicable predictive model, which can be helpful for predicting and manipulating phonon transport in nanofilms.

New Web Services for Broader Access to National Deep Submergence Facility Data Resources Through the Interdisciplinary Earth Data Alliance

NASA Astrophysics Data System (ADS)

Ferrini, V. L.; Grange, B.; Morton, J. J.; Soule, S. A.; Carbotte, S. M.; Lehnert, K.

2016-12-01

The National Deep Submergence Facility (NDSF) operates the Human Occupied Vehicle (HOV) Alvin, the Remotely Operated Vehicle (ROV) Jason, and the Autonomous Underwater Vehicle (AUV) Sentry. These vehicles are deployed throughout the global oceans to acquire sensor data and physical samples for a variety of interdisciplinary science programs. As part of the EarthCube Integrative Activity Alliance Testbed Project (ATP), new web services were developed to improve access to existing online NDSF data and metadata resources. These services make use of tools and infrastructure developed by the Interdisciplinary Earth Data Alliance (IEDA) and enable programmatic access to metadata and data resources as well as the development of new service-driven user interfaces. The Alvin Frame Grabber and Jason Virtual Van enable the exploration of frame-grabbed images derived from video cameras on NDSF dives. Metadata available for each image includes time and vehicle position, data from environmental sensors, and scientist-generated annotations, and data are organized and accessible by cruise and/or dive. A new FrameGrabber web service and service-driven user interface were deployed to offer integrated access to these data resources through a single API and allows users to search across content curated in both systems. In addition, a new NDSF Dive Metadata web service and service-driven user interface was deployed to provide consolidated access to basic information about each NDSF dive (e.g. vehicle name, dive ID, location, etc), which is important for linking distributed data resources curated in different data systems.

The Design and Implementation of a Semi-Autonomous Surf-Zone Robot Using Advanced Sensors and a Common Robot Operating System

DTIC Science & Technology

2011-06-01

effective way- point navigation algorithm that interfaced with a Java based graphical user interface (GUI), written by Uzun, for a robot named Bender [2...the angular acceleration, θ̈, or angular rate, θ̇. When considering a joint driven by an electric motor, the inertia and friction can be divided into...interactive simulations that can receive input from user controls, scripts , and other applications, such as Excel and MATLAB. One drawback is that the

Human factors opportunities to improve Ohio's transportation system : executive summary report.

DOT National Transportation Integrated Search

2005-06-01

Human factors engineering or ergonomics is the : area of engineering concerned with the humanmachine : interface. As Ohios road systems are : driven on by people, human factors engineering : is certainly relevant. However, human factors : have oft...

Thermal transport across metal silicide-silicon interfaces: First-principles calculations and Green's function transport simulations

NASA Astrophysics Data System (ADS)

Sadasivam, Sridhar; Ye, Ning; Feser, Joseph P.; Charles, James; Miao, Kai; Kubis, Tillmann; Fisher, Timothy S.

2017-02-01

Heat transfer across metal-semiconductor interfaces involves multiple fundamental transport mechanisms such as elastic and inelastic phonon scattering, and electron-phonon coupling within the metal and across the interface. The relative contributions of these different transport mechanisms to the interface conductance remains unclear in the current literature. In this work, we use a combination of first-principles calculations under the density functional theory framework and heat transport simulations using the atomistic Green's function (AGF) method to quantitatively predict the contribution of the different scattering mechanisms to the thermal interface conductance of epitaxial CoSi2-Si interfaces. An important development in the present work is the direct computation of interfacial bonding from density functional perturbation theory (DFPT) and hence the avoidance of commonly used "mixing rules" to obtain the cross-interface force constants from bulk material force constants. Another important algorithmic development is the integration of the recursive Green's function (RGF) method with Büttiker probe scattering that enables computationally efficient simulations of inelastic phonon scattering and its contribution to the thermal interface conductance. First-principles calculations of electron-phonon coupling reveal that cross-interface energy transfer between metal electrons and atomic vibrations in the semiconductor is mediated by delocalized acoustic phonon modes that extend on both sides of the interface, and phonon modes that are localized inside the semiconductor region of the interface exhibit negligible coupling with electrons in the metal. We also provide a direct comparison between simulation predictions and experimental measurements of thermal interface conductance of epitaxial CoSi2-Si interfaces using the time-domain thermoreflectance technique. Importantly, the experimental results, performed across a wide temperature range, only agree well with predictions that include all transport processes: elastic and inelastic phonon scattering, electron-phonon coupling in the metal, and electron-phonon coupling across the interface.

Turbulent mixing induced by Richtmyer-Meshkov instability

NASA Astrophysics Data System (ADS)

Krivets, V. V.; Ferguson, K. J.; Jacobs, J. W.

2017-01-01

Richtmyer-Meshkov instability is studied in shock tube experiments with an Atwood number of 0.7. The interface is formed in a vertical shock tube using opposed gas flows, and three-dimensional random initial interface perturbations are generated by the vertical oscillation of gas column producing Faraday waves. Planar Laser Mie scattering is used for flow visualization and for measurements of the mixing process. Experimental image sequences are recorded at 6 kHz frequency and processed to obtain the time dependent variation of the integral mixing layer width. Measurements of the mixing layer width are compared with Mikaelian's [1] model in order to extract the growth exponent θ where a fairly wide range of values is found varying from θ ≈ 0.2 to 0.6.

Interface mixing and its impact on exchange coupling in exchange biased systems

DOE PAGES

Manna, P. K.; Skoropata, E.; Ting, Y-W; ...

2016-10-05

Exchange bias and interlayer exchange coupling are interface driven phenomena. Since an ideal interface is very challenging to achieve, a clear understanding of the chemical and magnetic natures of interfaces is pivotal to identify their influence on the magnetism. We have chosen Ni 80Fe 20/CoO(t CoO)/Co trilayers as a model system, and identified non-stoichiometric Ni-ferrite and Co-ferrite at the surface and interface, respectively. These ferrites, being ferrimagnets typically, should influence the exchange coupling. But, in our trilayers the interface ferrites were found not to be ferro-or ferri-magnetic; thus having no observable influence on the exchange coupling. Our analysis also revealedmore » that (i) interlayer exchange coupling was present between Ni 80Fe 20 and Co even though the interlayer thickness was significantly larger than expected for this phenomenon to happen, and (ii) the majority of the CoO layer (except some portion near the interface) did not contribute to the observed exchange bias. Here, we also identified that the interlayer exchange coupling and the exchange bias properties were not interdependent.« less

Chimeric microbial rhodopsins for optical activation of Gs-proteins

PubMed Central

Yoshida, Kazuho; Yamashita, Takahiro; Sasaki, Kengo; Inoue, Keiichi; Shichida, Yoshinori; Kandori, Hideki

2017-01-01

We previously showed that the chimeric proteins of microbial rhodopsins, such as light-driven proton pump bacteriorhodopsin (BR) and Gloeobacter rhodopsin (GR) that contain cytoplasmic loops of bovine rhodopsin, are able to activate Gt protein upon light absorption. These facts suggest similar protein structural changes in both the light-driven proton pump and animal rhodopsin. Here we report two trials to engineer chimeric rhodopsins, one for the inserted loop, and another for the microbial rhodopsin template. For the former, we successfully activated Gs protein by light through the incorporation of the cytoplasmic loop of β2-adrenergic receptor (β2AR). For the latter, we did not observe any G-protein activation for the light-driven sodium pump from Indibacter alkaliphilus (IndiR2) or a light-driven chloride pump halorhodopsin from Natronomonas pharaonis (NpHR), whereas the light-driven proton pump GR showed light-dependent G-protein activation. This fact suggests that a helix opening motion is common to G protein coupled receptor (GPCR) and GR, but not to IndiR2 and NpHR. Light-induced difference FTIR spectroscopy revealed similar structural changes between WT and the third loop chimera for each light-driven pump. A helical structural perturbation, which was largest for GR, was further enhanced in the chimera. We conclude that similar structural dynamics that occur on the cytoplasmic side of GPCR are needed to design chimeric microbial rhodopsins. PMID:29362703

Stochastically-forced Decadal Variability in Australian Rainfall

NASA Astrophysics Data System (ADS)

Taschetto, A.

2015-12-01

Iconic Australian dry and wet periods were driven by anomalous conditions in the tropical oceans, such as the worst short-term drought in the southeast in 1982 associated with the strong El Niño and the widespread "Big Wet" in 1974 linked with a La Niña event. The association with oceanic conditions makes droughts predictable to some extent. However, prediction can be difficult when there is no clear external forcing such as El Niños. Can dry spells be triggered and maintained with no ocean memory? In this study, we investigate the potential role of internal multi-century atmospheric variability in controlling the frequency, duration and intensity of long-term dry and wet spells over Australia. Two multi-century-scale simulations were performed with the NCAR CESM: (1) a fully-coupled simulation (CPLD) and (2) an atmospheric simulation forced by a seasonal SST climatology derived from the coupled experiment (ACGM). Results reveal that droughts and wet spells can indeed be generated by internal variability of the atmosphere. Those internally generated events are less severe than those forced by oceanic variability, however the duration of dry and wet spells longer than 3 years is comparable with and without the ocean memory. Large-scale ocean modes of variability seem to play an important role in producing continental-scale rainfall impacts over Australia. While the Pacific Decadal Oscillation plays an important role in generating droughts in the fully coupled model, perturbations of monsoonal winds seem to be the main trigger of dry spells in the AGCM case. Droughts in the mid-latitude regions such as Tasmania can be driven by perturbations in the Southern Annular Mode, not necessarily linked to oceanic conditions even in the fully-coupled model. The mechanisms behind internally-driven mega-droughts and mega-wets will be discussed.

Short-lived halocarbons efficient at influencing climate through ozone loss in the upper troposphere-lower stratosphere

NASA Astrophysics Data System (ADS)

Hossaini, Ryan; Chipperfield, Martyn; Montzka, Steven; Rap, Alex; Dhomse, Sandip; Feng, Wuhu

2015-04-01

Halogenated very short-lived substances (VSLS) of both natural and anthropogenic origin are a significant source of atmospheric bromine, chlorine and iodine. Due to relatively short atmospheric lifetimes (typically <6 months), VSLS breakdown in the upper troposphere-lower stratosphere (UTLS), where ozone perturbations drive a disproportionately large climate impact compared to other altitudes. Here we present chemical transport model simulations that quantify VSLS-driven ozone loss in the UTLS and infer the climate relevance of these ozone perturbations using a radiative transfer model. Our results indicate that through their impact on UTLS ozone, VSLS are efficient at influencing climate. We calculate a whole atmosphere global mean radiative effect (RE) of -0.20 (-0.16 to -0.23) Wm-2 from natural and anthropogenic VSLS-driven ozone loss, including a tropospheric contribution of -0.12 Wm-2. In the stratosphere, the RE due to ozone loss from natural bromine-containing VSLS (e.g. CHBr3, CH2Br2) is almost half of that from long-lived anthropogenic compounds (e.g. CFCs) and normalized by equivalent chlorine is ~4 times larger. We show that the anthropogenic chlorine-containing VSLS, not regulated by the Montreal Protocol, also contribute to ozone loss in the UTLS and that the atmospheric concentration of dichloromethane (CH2Cl2), the most abundant of these, is increasing rapidly. Finally, we present evidence that VSLS have made a small yet previously unrecognized contribution to the ozone-driven radiative forcing of climate since pre-industrial times of -0.02 (-0.01 to -0.03) Wm-2. Given the climate leverage that VSLS possess, future increases to their emissions, either through continued industrial or altered natural processes, may be important for future climate forcing.

Diffusion of GPI-anchored proteins is influenced by the activity of dynamic cortical actin.

PubMed

Saha, Suvrajit; Lee, Il-Hyung; Polley, Anirban; Groves, Jay T; Rao, Madan; Mayor, Satyajit

2015-11-05

Molecular diffusion at the surface of living cells is believed to be predominantly driven by thermal kicks. However, there is growing evidence that certain cell surface molecules are driven by the fluctuating dynamics of cortical cytoskeleton. Using fluorescence correlation spectroscopy, we measure the diffusion coefficient of a variety of cell surface molecules over a temperature range of 24-37 °C. Exogenously incorporated fluorescent lipids with short acyl chains exhibit the expected increase of diffusion coefficient over this temperature range. In contrast, we find that GPI-anchored proteins exhibit temperature-independent diffusion over this range and revert to temperature-dependent diffusion on cell membrane blebs, in cells depleted of cholesterol, and upon acute perturbation of actin dynamics and myosin activity. A model transmembrane protein with a cytosolic actin-binding domain also exhibits the temperature-independent behavior, directly implicating the role of cortical actin. We show that diffusion of GPI-anchored proteins also becomes temperature dependent when the filamentous dynamic actin nucleator formin is inhibited. However, changes in cortical actin mesh size or perturbation of branched actin nucleator Arp2/3 do not affect this behavior. Thus cell surface diffusion of GPI-anchored proteins and transmembrane proteins that associate with actin is driven by active fluctuations of dynamic cortical actin filaments in addition to thermal fluctuations, consistent with expectations from an "active actin-membrane composite" cell surface. © 2015 Saha et al. This article is distributed by The American Society for Cell Biology under license from the author(s). Two months after publication it is available to the public under an Attribution–Noncommercial–Share Alike 3.0 Unported Creative Commons License (http://creativecommons.org/licenses/by-nc-sa/3.0).

Nearly spherical constant power detonation waves driven by focused radiation

NASA Technical Reports Server (NTRS)

George, Y. H.

1973-01-01

Shape and inner flow of a tridimensional spark are studied. The spark is created by focusing a laser beam in a gas. A second order fully non-linear equation is derived for the radial velocity on the axis of symmetry in the neighborhood of the origin. Solutions to that equation display the existence of a forbidden region near the focus, thus indicating the limits of applicability of a small perturbation solution.

Analytic study on low- external ideal infernal modes in tokamaks with large edge pressure gradients

NASA Astrophysics Data System (ADS)

Brunetti, Daniele; Graves, J. P.; Lazzaro, E.; Mariani, A.; Nowak, S.; Cooper, W. A.; Wahlberg, C.

2018-04-01

The problem of pressure driven infernal type perturbations near the plasma edge is addressed analytically for a circular limited tokamak configuration which presents an edge flattened safety factor. The plasma is separated from a metallic wall, either ideally conducting or resistive, by a vacuum region. The dispersion relation for such types of instabilities is derived and discussed for two classes of equilibrium profiles for pressure and mass density.

Polar-Direct-Drive Defect Implosions at OMEGA inPreparation for Experiments at NIF

NASA Astrophysics Data System (ADS)

Cobble, J. A.; Schmitt, M. J.; Murphy, T. J.; Tregillis, I. L.; Wysocki, F. J.; Obrey, K. D.; Magelssen, G. R.; Glebov, V.; Bradley, P. A.; Hsu, S. C.; Krasheninnikova, N. V.; Batha, S. H.

2011-10-01

The Defect-Implosion (DIME) campaign involves compressing perturbed spherical capsules with polar direct drive (PDD). For direct-drive implosions at NIF, PDD will be used. We have done simulations and experiments at OMEGA to test our modeling capability for equatorial-plane defects in fusion capsules and for PDD at NIF. Since PDD is anisotropic, we show the results of 0th hydrodynamics of implosions and perturbation-driven features near stagnation. Later presentations discuss defect-induced mix and neutronics, and laser pointing for NIF experiments. Prototype OMEGA shots used 865- μm diameter CH shells filled with 5 atm of D2. Machined channels 30- μm wide and up to 9- μm deep formed the defects. This work has been performed under the auspices of the US DOE, contract number DE-AC52-06NA25396.

Fast state transfer in a Λ-system: a shortcut-to-adiabaticity approach to robust and resource optimized control

NASA Astrophysics Data System (ADS)

Mortensen, Henrik Lund; Sørensen, Jens Jakob W. H.; Mølmer, Klaus; Sherson, Jacob Friis

2018-02-01

We propose an efficient strategy to find optimal control functions for state-to-state quantum control problems. Our procedure first chooses an input state trajectory, that can realize the desired transformation by adiabatic variation of the system Hamiltonian. The shortcut-to-adiabaticity formalism then provides a control Hamiltonian that realizes the reference trajectory exactly but on a finite time scale. As the final state is achieved with certainty, we define a cost functional that incorporates the resource requirements and a perturbative expression for robustness. We optimize this functional by systematically varying the reference trajectory. We demonstrate the method by application to population transfer in a laser driven three-level Λ-system, where we find solutions that are fast and robust against perturbations while maintaining a low peak laser power.

Universality of fast quenches from the conformal perturbation theory

NASA Astrophysics Data System (ADS)

Dymarsky, Anatoly; Smolkin, Michael

2018-01-01

We consider global quantum quenches, a protocol when a continuous field theoretic system in the ground state is driven by a homogeneous time-dependent external interaction. When the typical inverse time scale of the interaction is much larger than all relevant scales except for the UV-cutoff the system's response exhibits universal scaling behavior. We provide both qualitative and quantitative explanations of this universality and argue that physics of the response during and shortly after the quench is governed by the conformal perturbation theory around the UV fixed point. We proceed to calculate the response of one and two-point correlation functions confirming and generalizing universal scalings found previously. Finally, we discuss late time behavior after the quench and argue that all local quantities will equilibrate to their thermal values specified by an excess energy acquired by the system during the quench.

Fluids, superfluids and supersolids: dynamics and cosmology of self-gravitating media

DOE Office of Scientific and Technical Information (OSTI.GOV)

Celoria, Marco; Comelli, Denis; Pilo, Luigi, E-mail: marco.celoria@gssi.infn.it, E-mail: comelli@fe.infn.it, E-mail: luigi.pilo@aquila.infn.it

We compute cosmological perturbations for a generic self-gravitating media described by four derivatively-coupled scalar fields. Depending on the internal symmetries of the action for the scalar fields, one can describe perfect fluids, superfluids, solids and supersolids media. Symmetries dictate both dynamical and thermodynamical properties of the media. Generically, scalar perturbations include, besides the gravitational potential, an additional non-adiabatic mode associated with the entropy per particle σ. While perfect fluids and solids are adiabatic with σ constant in time, superfluids and supersolids feature a non-trivial dynamics for σ. Special classes of isentropic media with zero σ can also be found. Tensormore » modes become massive for solids and supersolids. Such an effective approach can be used to give a very general and symmetry driven modelling of the dark sector.« less

Two color laser driven THz generation in clustered plasma

NASA Astrophysics Data System (ADS)

Malik, Rakhee; Uma, R.; Kumar, Pawan

2017-07-01

A scheme of terahertz (THz) generation, using nonlinear mixing of two color laser (fundamental ω1 and slightly frequency shifted second harmonic ω2 ) in clustered plasma, is investigated. The lasers exert ponderomotive force on cluster electrons and drive density perturbations at 2 ω1 and ω2-ω1 . The density perturbations beat with the oscillatory velocities to produce nonlinear current at ω2-2 ω1 , generating THz radiation. The radiation is enhanced due to cluster plasmon resonance and by phase matching introduced through a density ripple. The generation involves third order nonlinearity and does not require a magnetic field or inhomogeneity to sustain it. We report THz power conversion efficiency ˜ 10-4 at 1 μm and 0.5 μm wavelengths with intensity ˜ 3 ×1014W/cm 2 .

The nature and energetics of AGN-driven perturbations in the hot gas in the Perseus Cluster

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhuravleva, I.; Churazov, E.; Arevalo, P.

In this paper, cores of relaxed galaxy clusters are often disturbed by AGN. Their Chandra observations revealed a wealth of structures induced by shocks, subsonic gas motions, bubbles of relativistic plasma, etc. In this paper, we determine the nature and energy content of gas fluctuations in the Perseus core by probing statistical properties of emissivity fluctuations imprinted in the soft- and hard-band X-ray images. About 80 per cent of the total variance of perturbations on ~8–70 kpc scales in the core have an isobaric nature, i.e. are consistent with subsonic displacements of the gas in pressure equilibrium with the ambientmore » medium. The observed variance translates to the ratio of energy in perturbations to thermal energy of ~13 per cent. In the region dominated by weak ‘ripples’, about half of the total variance is associated with isobaric perturbations on scales of a few tens of kpc. If these isobaric perturbations are induced by buoyantly rising bubbles, then these results suggest that most of the AGN-injected energy should first go into bubbles rather than into shocks. Using simulations of a shock propagating through the Perseus atmosphere, we found that models reproducing the observed features of a central shock have more than 50 per cent of the AGN-injected energy associated with the bubble enthalpy and only about 20 per cent is carried away with the shock. Such energy partition is consistent with the AGN-feedback model, mediated by bubbles of relativistic plasma, and supports the importance of turbulence in the cooling–heating balance.« less

The nature and energetics of AGN-driven perturbations in the hot gas in the Perseus Cluster

DOE PAGES

Zhuravleva, I.; Churazov, E.; Arevalo, P.; ...

2016-03-07

In this paper, cores of relaxed galaxy clusters are often disturbed by AGN. Their Chandra observations revealed a wealth of structures induced by shocks, subsonic gas motions, bubbles of relativistic plasma, etc. In this paper, we determine the nature and energy content of gas fluctuations in the Perseus core by probing statistical properties of emissivity fluctuations imprinted in the soft- and hard-band X-ray images. About 80 per cent of the total variance of perturbations on ~8–70 kpc scales in the core have an isobaric nature, i.e. are consistent with subsonic displacements of the gas in pressure equilibrium with the ambientmore » medium. The observed variance translates to the ratio of energy in perturbations to thermal energy of ~13 per cent. In the region dominated by weak ‘ripples’, about half of the total variance is associated with isobaric perturbations on scales of a few tens of kpc. If these isobaric perturbations are induced by buoyantly rising bubbles, then these results suggest that most of the AGN-injected energy should first go into bubbles rather than into shocks. Using simulations of a shock propagating through the Perseus atmosphere, we found that models reproducing the observed features of a central shock have more than 50 per cent of the AGN-injected energy associated with the bubble enthalpy and only about 20 per cent is carried away with the shock. Such energy partition is consistent with the AGN-feedback model, mediated by bubbles of relativistic plasma, and supports the importance of turbulence in the cooling–heating balance.« less

Long-wavelength Instability in Surface-tension-driven Bénard Convection

NASA Astrophysics Data System (ADS)

van Hook, Stephen J.

1997-03-01

Laboratory experiments and numerical simulations reveal that a liquid layer heated from below and possessing a free upper surface can undergo a long-wavelength deformational instability that causes rupture of the interface.(S. J. VanHook, M. F. Schatz, W. D. McCormick, J. B. Swift, and H. L. Swinney, Phys. Rev. Lett.) 75, 4397 (1995). Depending on the depth and thermal conductivity of the liquid and the overlying gas layer, the interface can rupture downwards and form a dry spot or rupture upwards and form a high spot. This long-wavelength instability competes with the formation of Bénard hexagons for thin or viscous liquid layers, or for liquid layers in microgravity.

The Thermal and Microstructural Effect of Plasticizing HMX-Nitrocellulose Composites

DOE PAGES

Yeager, John David; Watkins, Erik Benjamin; Duque, Amanda Lynn; ...

2017-03-15

Thermal ignition via self-heating (cook-off) of cyclotetramethylene-tetranitramine (HMX)-containing plastic-bonded explosives (PBXs) is driven by the β → δ phase transition in the HMX, which is affected if not dominated by microstructure. Here, we studied the HMX-binder interface and phase transition for several variations of PBX 9404 (HMX with plasticized nitrocellulose [NC] binder). Neutron reflectometry was used to examine the interface under several conditions—pristine, after aging, and after thermal treatment. The initial interfacial structure depended on the plasticizer, but the interface homogenized over time. Thermal and optical analyses showed that all formulated materials had higher transition temperatures than neat HMX. Thismore » effect increased with NC content.« less

Evolution of MPCV Service Module Propulsion and GNC Interface Requirements

NASA Technical Reports Server (NTRS)

Hickman, Heather K.; Dickens, Kevin W.; Madsen, Jennifer M.; Gutkowski, Jeffrey P.; Ierardo, Nicola; Jaeger, Markus; Lux, Johannes; Freundenberger, John L.; Paisley, Jonathan

2014-01-01

The Orion Multi-Purpose Crew Vehicle Service Module Propulsion Subsystem provides propulsion for the integrated Crew and Service Module. Updates in the exploration architecture between Constellation and MPCV as well as NASA's partnership with the European Space Agency have resulted in design changes to the SM Propulsion Subsystem and updates to the Propulsion interface requirements with Guidance Navigation and Control. This paper focuses on the Propulsion and GNC interface requirement updates between the Constellation Service Module and the European Service Module and how the requirement updates were driven or supported by architecture updates and the desired use of hardware with heritage to United States and European spacecraft for the Exploration Missions, EM-1 and EM-2.

The Thermal and Microstructural Effect of Plasticizing HMX-Nitrocellulose Composites

NASA Astrophysics Data System (ADS)

Yeager, John D.; Watkins, Erik B.; Higginbotham Duque, Amanda L.; Majewski, Jaroslaw

2018-01-01

Thermal ignition via self-heating (cook-off) of cyclotetramethylene-tetranitramine (HMX)-containing plastic-bonded explosives (PBXs) is driven by the β → δ phase transition in the HMX, which is affected if not dominated by microstructure. Here, the HMX-binder interface and phase transition were studied for several variations of PBX 9404 (HMX with plasticized nitrocellulose [NC] binder). Neutron reflectometry was used to examine the interface under several conditions-pristine, after aging, and after thermal treatment. The initial interfacial structure depended on the plasticizer, but the interface homogenized over time. Thermal and optical analyses showed that all formulated materials had higher transition temperatures than neat HMX. This effect increased with NC content.

Nanoparticles in liquid crystals, and liquid crystals in nanoparticles

NASA Astrophysics Data System (ADS)

de Pablo, Juan

2015-03-01

Liquid crystals are remarkably sensitive to interfacial interactions. Small perturbations at a liquid crystal interface, for example, can be propagated over relatively long length scales, thereby providing the basis for a wide range of applications that rely on amplification of molecular events into macroscopic observables. Our recent research efforts have focused on the reverse phenomenon; that is, we have sought to manipulate the interfacial assembly of nanoparticles or the organization of surface active molecules by controlling the structure of a liquid crystal. This presentation will consist of a review of the basic principles that are responsible for liquid crystal-mediated interactions, followed by demonstrations of those principles in the context of two types of systems. In the first, a liquid crystal is used to direct the assembly of nanoparticles; through a combination of molecular and continuum models, it is found that minute changes in interfacial energy and particle size lead to liquid-crystal induced attractions that can span multiple orders of magnitude. Theoretical predictions are confirmed by experimental observations, which also suggest that LC-mediated assembly provides an effective means for fabrication of plasmonic devices. In the second type of system, the structure of a liquid crystal is controlled by confinement in submicron droplets. The morphology of the liquid crystal in a drop depends on a delicate balance between bulk and interfacial contributions to the free energy; that balance can be easily perturbed by adsorption of analytes or nanoparticles at the interface, thereby providing the basis for development of hierarchical assembly of responsive, anisotropic materials. Theoretical predictions also indicate that the three-dimensional order of a liquid crystal can be projected onto a two-dimensional interface, and give rise to novel nanostructures that are not found in simple isotropic fluids.

Viscous effects on the Rayleigh-Taylor instability with background temperature gradient

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gerashchenko, Sergiy; Livescu, Daniel

Here we studied the growth rate of the compressible Rayleigh-Taylor instability in the presence of a background temperature gradient, Θ, using a normal mode analysis. The effect of Θ variation is examined for three interface types corresponding to the combinations of the viscous properties of the fluids (inviscid-inviscid, viscous-viscous, and viscous-inviscid) at different Atwood numbers, At, and when at least one of the fluids' viscosity is non-zero, as a function of the Grashof number. For the general case, the resulting ordinary differential equations are solved numerically; however, dispersion relations for the growth rate are presented for several limiting cases. Anmore » analytical solution is found for the inviscid-inviscid interface and the corresponding dispersion equation for the growth rate is obtained in the limit of large Θ. For the viscous-inviscid case, a dispersion relation is derived in the incompressible limit and Θ=0. Compared to Θ=0 case, the role of Θ<0 (hotter light fluid) is destabilizing and becomes stabilizing when Θ>0 (colder light fluid). The most pronounced effect of Θ ≠ 0 is found at low At and/or at large perturbation wavelengths relative to the domain size for all interface types. On the other hand, at small perturbation wavelengths relative to the domain size, the growth rate for the Θ<0 case exceeds the infinite domain incompressible constant density result. The results are applied to two practical examples, using sets of parameters relevant to Inertial Confinement Fusion coasting stage and solar corona plumes. The role of viscosity on the growth rate reduction is discussed together with highlighting the range of wavenumbers most affected by viscosity. The viscous effects further increase in the presence of background temperature gradient, when the viscosity is temperature dependent.« less

Viscous effects on the Rayleigh-Taylor instability with background temperature gradient

DOE PAGES

Gerashchenko, Sergiy; Livescu, Daniel

2016-07-28

Here we studied the growth rate of the compressible Rayleigh-Taylor instability in the presence of a background temperature gradient, Θ, using a normal mode analysis. The effect of Θ variation is examined for three interface types corresponding to the combinations of the viscous properties of the fluids (inviscid-inviscid, viscous-viscous, and viscous-inviscid) at different Atwood numbers, At, and when at least one of the fluids' viscosity is non-zero, as a function of the Grashof number. For the general case, the resulting ordinary differential equations are solved numerically; however, dispersion relations for the growth rate are presented for several limiting cases. Anmore » analytical solution is found for the inviscid-inviscid interface and the corresponding dispersion equation for the growth rate is obtained in the limit of large Θ. For the viscous-inviscid case, a dispersion relation is derived in the incompressible limit and Θ=0. Compared to Θ=0 case, the role of Θ<0 (hotter light fluid) is destabilizing and becomes stabilizing when Θ>0 (colder light fluid). The most pronounced effect of Θ ≠ 0 is found at low At and/or at large perturbation wavelengths relative to the domain size for all interface types. On the other hand, at small perturbation wavelengths relative to the domain size, the growth rate for the Θ<0 case exceeds the infinite domain incompressible constant density result. The results are applied to two practical examples, using sets of parameters relevant to Inertial Confinement Fusion coasting stage and solar corona plumes. The role of viscosity on the growth rate reduction is discussed together with highlighting the range of wavenumbers most affected by viscosity. The viscous effects further increase in the presence of background temperature gradient, when the viscosity is temperature dependent.« less

Molecular dynamics simulations of salicylate effects on the micro- and mesoscopic properties of a dipalmitoylphosphatidylcholine bilayer†

PubMed Central

Song, Yuhua; Guallar, Victor; Baker, Nathan A.

2008-01-01

Salicylate, an amphiphilic molecule and a popular member of non-steroidal antiinflammatory drug family, is known to affect hearing through reduction of the electromechanical coupling in the outer hair cells of the ear. This reduction of electromotility by salicylate has been widely studied but the molecular mechanism of the phenomenon is still unknown. In this study, we investigated one aspect of salicylate’s action; namely, the perturbation of electrical and mechanical membrane properties by salicylate in the absence of cytoskeletal or membrane-bound motor proteins such as prestin. In particular, we simulated the interaction of salicylate with a dipalmitoylphosphatidylcholine (DPPC) bilayer via atomically-detailed molecular dynamics simulations to observe the effect of salicylate on the microscopic and mesoscopic properties of the bilayer. The results demonstrate that salicylate interacts with the bilayer by associating at the water-DPPC interface in a nearly perpendicular orientation and penetrating more deeply into the bilayer than either sodium or chloride. This association has several affects on the membrane properties. First, binding of salicylate to the membrane displaces chloride from the bilayer-water interface. Second, salicylate influences the electrostatic potential and dielectric properties of the bilayer, with significant changes at the water-lipid bilayer interface. Third, salicylate association results in structural changes including decreased head group area per lipid and increased lipid tail order. However, salicylate does not significantly alter the mechanical properties of the DPPC bilayer; bulk compressibility, area compressibility, and bending modulus were only perturbed by small, statistically-insignificant amounts, by the presence of salicylate. The observations from these simulations are in qualitative agreement with experimental data and support the conclusion that salicylate influences the electrical but not the mechanical properties of DPPC membranes. PMID:16216066

Anderson localization and Mott insulator phase in the time domain

PubMed Central

Sacha, Krzysztof

2015-01-01

Particles in space periodic potentials constitute standard models for investigation of crystalline phenomena in solid state physics. Time periodicity of periodically driven systems is a close analogue of space periodicity of solid state crystals. There is an intriguing question if solid state phenomena can be observed in the time domain. Here we show that wave-packets localized on resonant classical trajectories of periodically driven systems are ideal elements to realize Anderson localization or Mott insulator phase in the time domain. Uniform superpositions of the wave-packets form stationary states of a periodically driven particle. However, an additional perturbation that fluctuates in time results in disorder in time and Anderson localization effects emerge. Switching to many-particle systems we observe that depending on how strong particle interactions are, stationary states can be Bose-Einstein condensates or single Fock states where definite numbers of particles occupy the periodically evolving wave-packets. Our study shows that non-trivial crystal-like phenomena can be observed in the time domain. PMID:26074169

BOW SHOCK FRAGMENTATION DRIVEN BY A THERMAL INSTABILITY IN LABORATORY ASTROPHYSICS EXPERIMENTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Suzuki-Vidal, F.; Lebedev, S. V.; Pickworth, L. A.

The role of radiative cooling during the evolution of a bow shock was studied in laboratory-astrophysics experiments that are scalable to bow shocks present in jets from young stellar objects. The laboratory bow shock is formed during the collision of two counterstreaming, supersonic plasma jets produced by an opposing pair of radial foil Z-pinches driven by the current pulse from the MAGPIE pulsed-power generator. The jets have different flow velocities in the laboratory frame, and the experiments are driven over many times the characteristic cooling timescale. The initially smooth bow shock rapidly develops small-scale nonuniformities over temporal and spatial scalesmore » that are consistent with a thermal instability triggered by strong radiative cooling in the shock. The growth of these perturbations eventually results in a global fragmentation of the bow shock front. The formation of a thermal instability is supported by analysis of the plasma cooling function calculated for the experimental conditions with the radiative packages ABAKO/RAPCAL.« less

Role of magnetic fluctuations in mode selection of magnetically driven instabilities

NASA Astrophysics Data System (ADS)

Dan, Jia-Kun; Ren, Xiao-Dong; Huang, Xian-Bin; Ouyang, Kai; Chen, Guang-Hua

2014-12-01

The influences of magnetic fluctuations on quasiperiodic structure formation and fundamental wavelength selection of the instability have been studied using two 25-μm-diameter tungsten wires on a 100 ns rise time, 220 kA pulsed power facility. Two different load configurations were adopted to make end surfaces of electrodes approximately satisfy reflecting and absorbing boundary conditions, respectively. The experimental results that the fundamental wavelength in the case of absorbing boundary condition is about one half of that in the case of reflecting boundary condition have demonstrated that magnetic fluctuations appear to play a key role in mode selection of magnetically driven instabilities. The dominant wavelength should be proportional to magnetic field and inversely proportional to square root of mass density, provided that the magnetosonic wave propagating perpendicular to magnetic fields provides a leading candidate for magnetic fluctuations. Therefore, magnetic fluctuation is one of the three key perturbations, along with surface contaminants and surface roughness, that seeds magnetically driven instabilities.

Experimental studies of high-confinement mode plasma response to non-axisymmetric magnetic perturbations in ASDEX Upgrade

NASA Astrophysics Data System (ADS)

Suttrop, W.; Kirk, A.; Nazikian, R.; Leuthold, N.; Strumberger, E.; Willensdorfer, M.; Cavedon, M.; Dunne, M.; Fischer, R.; Fietz, S.; Fuchs, J. C.; Liu, Y. Q.; McDermott, R. M.; Orain, F.; Ryan, D. A.; Viezzer, E.; The ASDEX Upgrade Team; The DIII-D Team; The Eurofusion MST1 Team

2017-01-01

The interaction of externally applied small non-axisymmetric magnetic perturbations (MP) with tokamak high-confinement mode (H-mode) plasmas is reviewed and illustrated by recent experiments in ASDEX Upgrade. The plasma response to the vacuum MP field is amplified by stable ideal kink modes with low toroidal mode number n driven by the H-mode edge pressure gradient (and associated bootstrap current) which is experimentally evidenced by an observable shift of the poloidal mode number m away from field alignment (m  =  qn, with q being the safety factor) at the response maximum. A torque scan experiment demonstrates the importance of the perpendicular electron flow for shielding of the resonant magnetic perturbation, as expected from a two-fluid MHD picture. Two significant effects of MP occur in H-mode plasmas at low pedestal collisionality, ν \\text{ped}\\ast≤slant 0.4 : (a) a reduction of the global plasma density by up to 61 % and (b) a reduction of the energy loss associated with edge localised modes (ELMs) by a factor of up to 9. A comprehensive database of ELM mitigation pulses at low {ν\\ast} in ASDEX Upgrade shows that the degree of ELM mitigation correlates with the reduction of pedestal pressure which in turn is limited and defined by the onset of ELMs, i. e. a modification of the ELM stability limit by the magnetic perturbation.